##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build Myco_tube_TKK_03_0100_V1 #!genome-build-accession NCBI_Assembly:GCF_000651955.1 #!annotation-date 06/29/2025 09:55:44 #!annotation-source NCBI RefSeq GCF_000651955.1-RS_2025_06_29 ##sequence-region NZ_KK316828.1 1 3745328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448434 NZ_KK316828.1 RefSeq region 1 3745328 . + . ID=NZ_KK316828.1:1..3745328;Dbxref=taxon:1448434;collection-date=2013-04-16;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0100 NZ_KK316828.1 RefSeq gene 1 1524 . + . ID=gene-AL55_RS05815;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AL55_RS05815;old_locus_tag=AL55_00001;partial=true;start_range=.,1 NZ_KK316828.1 Protein Homology CDS 1 1524 . + 0 ID=cds-WP_374487265.1;Parent=gene-AL55_RS05815;Dbxref=GenBank:WP_374487265.1;Name=WP_374487265.1;Ontology_term=GO:0006275,GO:0003688,GO:0005524,GO:0043565;gbkey=CDS;gene=dnaA;go_function=DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214515.1;locus_tag=AL55_RS05815;partial=true;product=chromosomal replication initiator protein DnaA;protein_id=WP_374487265.1;start_range=.,1;transl_table=11 NZ_KK316828.1 RefSeq gene 1646 2907 . + . ID=gene-AL55_RS05825;Name=AL55_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS05825;old_locus_tag=AL55_00003 NZ_KK316828.1 Protein Homology CDS 1646 1934 . + 0 ID=cds-WP_087902221.1;Parent=gene-AL55_RS05825;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS05825;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 1934 2907 . + 2 ID=cds-WP_087902221.1;Parent=gene-AL55_RS05825;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS05825;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3410 4618 . + . ID=gene-AL55_RS05830;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AL55_RS05830;old_locus_tag=AL55_00004 NZ_KK316828.1 Protein Homology CDS 3410 4618 . + 0 ID=cds-WP_003400271.1;Parent=gene-AL55_RS05830;Dbxref=GenBank:WP_003400271.1;Name=WP_003400271.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214516.1;locus_tag=AL55_RS05830;product=DNA polymerase III subunit beta;protein_id=WP_003400271.1;transl_table=11 NZ_KK316828.1 RefSeq gene 4638 5795 . + . ID=gene-AL55_RS05835;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AL55_RS05835;old_locus_tag=AL55_00005 NZ_KK316828.1 Protein Homology CDS 4638 5795 . + 0 ID=cds-WP_003899768.1;Parent=gene-AL55_RS05835;Dbxref=GenBank:WP_003899768.1;Name=WP_003899768.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214517.1;locus_tag=AL55_RS05835;product=DNA replication/repair protein RecF;protein_id=WP_003899768.1;transl_table=11 NZ_KK316828.1 RefSeq gene 5792 6355 . + . ID=gene-AL55_RS05840;Name=AL55_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS05840;old_locus_tag=AL55_00006 NZ_KK316828.1 Protein Homology CDS 5792 6355 . + 0 ID=cds-WP_003899769.1;Parent=gene-AL55_RS05840;Dbxref=GenBank:WP_003899769.1;Name=WP_003899769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214518.1;locus_tag=AL55_RS05840;product=DNA replication protein DciA;protein_id=WP_003899769.1;transl_table=11 NZ_KK316828.1 RefSeq gene 6598 8625 . + . ID=gene-AL55_RS05845;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AL55_RS05845;old_locus_tag=AL55_00007 NZ_KK316828.1 Protein Homology CDS 6598 8625 . + 0 ID=cds-WP_003917863.1;Parent=gene-AL55_RS05845;Dbxref=GenBank:WP_003917863.1;Name=WP_003917863.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214519.2;locus_tag=AL55_RS05845;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_003917863.1;transl_table=11 NZ_KK316828.1 RefSeq gene 8660 11176 . + . ID=gene-AL55_RS05850;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AL55_RS05850;old_locus_tag=AL55_00008 NZ_KK316828.1 Protein Homology CDS 8660 11176 . + 0 ID=cds-WP_003400286.1;Parent=gene-AL55_RS05850;Dbxref=GenBank:WP_003400286.1;Name=WP_003400286.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214520.1;locus_tag=AL55_RS05850;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_003400286.1;transl_table=11 NZ_KK316828.1 RefSeq gene 11272 12186 . + . ID=gene-AL55_RS05855;Name=AL55_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS05855;old_locus_tag=AL55_00009 NZ_KK316828.1 Protein Homology CDS 11272 12186 . + 0 ID=cds-WP_003400291.1;Parent=gene-AL55_RS05855;Dbxref=GenBank:WP_003400291.1;Name=WP_003400291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214521.1;locus_tag=AL55_RS05855;product=DUF3566 domain-containing protein;protein_id=WP_003400291.1;transl_table=11 NZ_KK316828.1 RefSeq gene 12245 12318 . + . ID=gene-AL55_RS05860;Name=AL55_RS05860;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS05860;old_locus_tag=AL55_00010 NZ_KK316828.1 tRNAscan-SE tRNA 12245 12318 . + . ID=rna-AL55_RS05860;Parent=gene-AL55_RS05860;anticodon=(pos:12279..12281);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS05860;product=tRNA-Ile NZ_KK316828.1 tRNAscan-SE exon 12245 12318 . + . ID=exon-AL55_RS05860-1;Parent=rna-AL55_RS05860;anticodon=(pos:12279..12281);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS05860;product=tRNA-Ile NZ_KK316828.1 RefSeq gene 12470 12542 . + . ID=gene-AL55_RS05865;Name=AL55_RS05865;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS05865;old_locus_tag=AL55_00011 NZ_KK316828.1 tRNAscan-SE tRNA 12470 12542 . + . ID=rna-AL55_RS05865;Parent=gene-AL55_RS05865;anticodon=(pos:12503..12505);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS05865;product=tRNA-Ala NZ_KK316828.1 tRNAscan-SE exon 12470 12542 . + . ID=exon-AL55_RS05865-1;Parent=rna-AL55_RS05865;anticodon=(pos:12503..12505);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS05865;product=tRNA-Ala NZ_KK316828.1 RefSeq gene 12583 12774 . + . ID=gene-AL55_RS27450;Name=AL55_RS27450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27450 NZ_KK316828.1 Protein Homology CDS 12583 12774 . + 0 ID=cds-WP_003400294.1;Parent=gene-AL55_RS27450;Dbxref=GenBank:WP_003400294.1;Name=WP_003400294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400294.1;locus_tag=AL55_RS27450;product=hypothetical protein;protein_id=WP_003400294.1;transl_table=11 NZ_KK316828.1 RefSeq gene 12913 13050 . - . ID=gene-AL55_RS27175;Name=AL55_RS27175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27175 NZ_KK316828.1 GeneMarkS-2+ CDS 12913 13050 . - 0 ID=cds-WP_003400297.1;Parent=gene-AL55_RS27175;Dbxref=GenBank:WP_003400297.1;Name=WP_003400297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS27175;product=hypothetical protein;protein_id=WP_003400297.1;transl_table=11 NZ_KK316828.1 RefSeq gene 13232 13669 . - . ID=gene-AL55_RS05870;Name=cwsA;gbkey=Gene;gene=cwsA;gene_biotype=protein_coding;locus_tag=AL55_RS05870;old_locus_tag=AL55_00012 NZ_KK316828.1 Protein Homology CDS 13232 13669 . - 0 ID=cds-WP_003400307.1;Parent=gene-AL55_RS05870;Dbxref=GenBank:WP_003400307.1;Name=WP_003400307.1;gbkey=CDS;gene=cwsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400307.1;locus_tag=AL55_RS05870;product=cell wall synthesis protein CwsA;protein_id=WP_003400307.1;transl_table=11 NZ_KK316828.1 RefSeq gene 13826 14374 . + . ID=gene-AL55_RS05875;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;locus_tag=AL55_RS05875;old_locus_tag=AL55_00013 NZ_KK316828.1 Protein Homology CDS 13826 14374 . + 0 ID=cds-WP_003400321.1;Parent=gene-AL55_RS05875;Dbxref=GenBank:WP_003400321.1;Name=WP_003400321.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400321.1;locus_tag=AL55_RS05875;product=peptidylprolyl isomerase PpiA;protein_id=WP_003400321.1;transl_table=11 NZ_KK316828.1 RefSeq gene 14491 14916 . - . ID=gene-AL55_RS05880;Name=AL55_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS05880;old_locus_tag=AL55_00014 NZ_KK316828.1 Protein Homology CDS 14491 14916 . - 0 ID=cds-WP_003899772.1;Parent=gene-AL55_RS05880;Dbxref=GenBank:WP_003899772.1;Name=WP_003899772.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214524.1;locus_tag=AL55_RS05880;product=PH domain-containing protein;protein_id=WP_003899772.1;transl_table=11 NZ_KK316828.1 RefSeq gene 15072 15353 . - . ID=gene-AL55_RS05885;Name=crgA;gbkey=Gene;gene=crgA;gene_biotype=protein_coding;locus_tag=AL55_RS05885;old_locus_tag=AL55_00015 NZ_KK316828.1 Protein Homology CDS 15072 15353 . - 0 ID=cds-WP_003400344.1;Parent=gene-AL55_RS05885;Dbxref=GenBank:WP_003400344.1;Name=WP_003400344.1;gbkey=CDS;gene=crgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214525.1;locus_tag=AL55_RS05885;product=cell division protein CrgA;protein_id=WP_003400344.1;transl_table=11 NZ_KK316828.1 RefSeq gene 15492 16235 . + . ID=gene-AL55_RS05890;Name=AL55_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS05890;old_locus_tag=AL55_00016 NZ_KK316828.1 Protein Homology CDS 15492 16235 . + 0 ID=cds-WP_003917999.1;Parent=gene-AL55_RS05890;Dbxref=GenBank:WP_003917999.1;Name=WP_003917999.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008262548.1;locus_tag=AL55_RS05890;product=DUF881 domain-containing protein;protein_id=WP_003917999.1;transl_table=11 NZ_KK316828.1 RefSeq gene 16272 16970 . + . ID=gene-AL55_RS05895;Name=trpG;gbkey=Gene;gene=trpG;gene_biotype=protein_coding;locus_tag=AL55_RS05895;old_locus_tag=AL55_00017 NZ_KK316828.1 Protein Homology CDS 16272 16970 . + 0 ID=cds-WP_003400352.1;Parent=gene-AL55_RS05895;Dbxref=GenBank:WP_003400352.1;Name=WP_003400352.1;gbkey=CDS;gene=trpG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177615.1;locus_tag=AL55_RS05895;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_003400352.1;transl_table=11 NZ_KK316828.1 RefSeq gene 16948 18828 . - . ID=gene-AL55_RS05900;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=AL55_RS05900;old_locus_tag=AL55_00018 NZ_KK316828.1 Protein Homology CDS 16948 18828 . - 0 ID=cds-WP_003902584.1;Parent=gene-AL55_RS05900;Dbxref=GenBank:WP_003902584.1;Name=WP_003902584.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214528.1;locus_tag=AL55_RS05900;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_003902584.1;transl_table=11 NZ_KK316828.1 RefSeq gene 18825 20120 . - . ID=gene-AL55_RS05905;Name=pknA;gbkey=Gene;gene=pknA;gene_biotype=protein_coding;locus_tag=AL55_RS05905;old_locus_tag=AL55_00019 NZ_KK316828.1 Protein Homology CDS 18825 20120 . - 0 ID=cds-WP_003906262.1;Parent=gene-AL55_RS05905;Dbxref=GenBank:WP_003906262.1;Name=WP_003906262.1;gbkey=CDS;gene=pknA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214529.1;locus_tag=AL55_RS05905;product=serine/threonine protein kinase PknA;protein_id=WP_003906262.1;transl_table=11 NZ_KK316828.1 RefSeq gene 20117 21592 . - . ID=gene-AL55_RS05910;Name=pbpA;gbkey=Gene;gene=pbpA;gene_biotype=protein_coding;locus_tag=AL55_RS05910;old_locus_tag=AL55_00020 NZ_KK316828.1 Protein Homology CDS 20117 21592 . - 0 ID=cds-WP_003899775.1;Parent=gene-AL55_RS05910;Dbxref=GenBank:WP_003899775.1;Name=WP_003899775.1;gbkey=CDS;gene=pbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214530.1;locus_tag=AL55_RS05910;product=D%2CD-transpeptidase PbpA;protein_id=WP_003899775.1;transl_table=11 NZ_KK316828.1 RefSeq gene 21589 22998 . - . ID=gene-AL55_RS05915;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=AL55_RS05915;old_locus_tag=AL55_00021 NZ_KK316828.1 Protein Homology CDS 21589 22998 . - 0 ID=cds-WP_003400364.1;Parent=gene-AL55_RS05915;Dbxref=GenBank:WP_003400364.1;Name=WP_003400364.1;gbkey=CDS;gene=rodA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214531.1;locus_tag=AL55_RS05915;product=cell shape-determining peptidoglycan glycosyltransferase RodA;protein_id=WP_003400364.1;transl_table=11 NZ_KK316828.1 RefSeq gene 22995 24530 . - . ID=gene-AL55_RS05920;Name=pstP;gbkey=Gene;gene=pstP;gene_biotype=protein_coding;locus_tag=AL55_RS05920;old_locus_tag=AL55_00022 NZ_KK316828.1 Protein Homology CDS 22995 24530 . - 0 ID=cds-WP_003912500.1;Parent=gene-AL55_RS05920;Dbxref=GenBank:WP_003912500.1;Name=WP_003912500.1;gbkey=CDS;gene=pstP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385224.1;locus_tag=AL55_RS05920;product=serine/threonine phosphatase PstP;protein_id=WP_003912500.1;transl_table=11 NZ_KK316828.1 RefSeq gene 24628 25095 . - . ID=gene-AL55_RS05925;Name=fhaB;gbkey=Gene;gene=fhaB;gene_biotype=protein_coding;locus_tag=AL55_RS05925;old_locus_tag=AL55_00023 NZ_KK316828.1 Protein Homology CDS 24628 25095 . - 0 ID=cds-WP_003400373.1;Parent=gene-AL55_RS05925;Dbxref=GenBank:WP_003400373.1;Name=WP_003400373.1;gbkey=CDS;gene=fhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214533.1;locus_tag=AL55_RS05925;product=FHA domain-containing protein FhaB/FipA;protein_id=WP_003400373.1;transl_table=11 NZ_KK316828.1 RefSeq gene 25219 26784 . - . ID=gene-AL55_RS05930;Name=fhaA;gbkey=Gene;gene=fhaA;gene_biotype=protein_coding;locus_tag=AL55_RS05930;old_locus_tag=AL55_00024 NZ_KK316828.1 Protein Homology CDS 25219 26784 . - 0 ID=cds-WP_003899777.1;Parent=gene-AL55_RS05930;Dbxref=GenBank:WP_003899777.1;Name=WP_003899777.1;gbkey=CDS;gene=fhaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214534.1;locus_tag=AL55_RS05930;product=cell division-associated protein FhaA;protein_id=WP_003899777.1;transl_table=11 NZ_KK316828.1 RefSeq gene 26984 27066 . + . ID=gene-AL55_RS05935;Name=AL55_RS05935;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS05935;old_locus_tag=AL55_00025 NZ_KK316828.1 tRNAscan-SE tRNA 26984 27066 . + . ID=rna-AL55_RS05935;Parent=gene-AL55_RS05935;anticodon=(pos:27017..27019);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS05935;product=tRNA-Leu NZ_KK316828.1 tRNAscan-SE exon 26984 27066 . + . ID=exon-AL55_RS05935-1;Parent=rna-AL55_RS05935;anticodon=(pos:27017..27019);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS05935;product=tRNA-Leu NZ_KK316828.1 RefSeq gene 27253 28221 . - . ID=gene-AL55_RS05940;Name=AL55_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS05940;old_locus_tag=AL55_00026 NZ_KK316828.1 Protein Homology CDS 27253 28221 . - 0 ID=cds-WP_003899778.1;Parent=gene-AL55_RS05940;Dbxref=GenBank:WP_003899778.1;Name=WP_003899778.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214535.1;locus_tag=AL55_RS05940;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_003899778.1;transl_table=11 NZ_KK316828.1 RefSeq gene 28363 28782 . - . ID=gene-AL55_RS05945;Name=whiB5;gbkey=Gene;gene=whiB5;gene_biotype=protein_coding;locus_tag=AL55_RS05945;old_locus_tag=AL55_00027 NZ_KK316828.1 Protein Homology CDS 28363 28782 . - 0 ID=cds-WP_003400388.1;Parent=gene-AL55_RS05945;Dbxref=GenBank:WP_003400388.1;Name=WP_003400388.1;gbkey=CDS;gene=whiB5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214536.1;locus_tag=AL55_RS05945;product=transcriptional regulator WhiB5;protein_id=WP_003400388.1;transl_table=11 NZ_KK316828.1 RefSeq gene 28935 29705 . + . ID=gene-AL55_RS05950;Name=AL55_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS05950;old_locus_tag=AL55_00028 NZ_KK316828.1 Protein Homology CDS 28935 29705 . + 0 ID=cds-WP_003400391.1;Parent=gene-AL55_RS05950;Dbxref=GenBank:WP_003400391.1;Name=WP_003400391.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214537.1;locus_tag=AL55_RS05950;product=helix-turn-helix domain-containing protein;protein_id=WP_003400391.1;transl_table=11 NZ_KK316828.1 RefSeq gene 29689 30546 . + . ID=gene-AL55_RS05955;Name=AL55_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS05955;old_locus_tag=AL55_00029 NZ_KK316828.1 Protein Homology CDS 29689 30546 . + 0 ID=cds-WP_003901769.1;Parent=gene-AL55_RS05955;Dbxref=GenBank:WP_003901769.1;Name=WP_003901769.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901769.1;locus_tag=AL55_RS05955;product=C40 family peptidase;protein_id=WP_003901769.1;transl_table=11 NZ_KK316828.1 RefSeq gene 30584 30946 . + . ID=gene-AL55_RS05960;Name=AL55_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS05960;old_locus_tag=AL55_00030 NZ_KK316828.1 Protein Homology CDS 30584 30946 . + 0 ID=cds-WP_003400395.1;Parent=gene-AL55_RS05960;Dbxref=GenBank:WP_003400395.1;Name=WP_003400395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214539.1;locus_tag=AL55_RS05960;product=DUF4226 domain-containing protein;protein_id=WP_003400395.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 31079 32490 . + . ID=gene-AL55_RS05965;Name=AL55_RS05965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS05965;old_locus_tag=AL55_00031;pseudo=true NZ_KK316828.1 Protein Homology CDS 31079 32490 . + 0 ID=cds-AL55_RS05965;Parent=gene-AL55_RS05965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302351.1;locus_tag=AL55_RS05965;product=DUF4226 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 32528 32845 . + . ID=gene-AL55_RS05970;Name=AL55_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS05970;old_locus_tag=AL55_00032 NZ_KK316828.1 Protein Homology CDS 32528 32845 . + 0 ID=cds-WP_003400401.1;Parent=gene-AL55_RS05970;Dbxref=GenBank:WP_003400401.1;Name=WP_003400401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214541.1;locus_tag=AL55_RS05970;product=ESX-1 secretion-associated protein;protein_id=WP_003400401.1;transl_table=11 NZ_KK316828.1 RefSeq gene 32853 33158 . + . ID=gene-AL55_RS05975;Name=AL55_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS05975;old_locus_tag=AL55_00033 NZ_KK316828.1 Protein Homology CDS 32853 33158 . + 0 ID=cds-WP_003400405.1;Parent=gene-AL55_RS05975;Dbxref=GenBank:WP_003400405.1;Name=WP_003400405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214542.1;locus_tag=AL55_RS05975;product=DUF2694 domain-containing protein;protein_id=WP_003400405.1;transl_table=11 NZ_KK316828.1 RefSeq gene 33163 33306 . - . ID=gene-AL55_RS27180;Name=AL55_RS27180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27180 NZ_KK316828.1 Protein Homology CDS 33163 33306 . - 0 ID=cds-WP_003400408.1;Parent=gene-AL55_RS27180;Dbxref=GenBank:WP_003400408.1;Name=WP_003400408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400408.1;locus_tag=AL55_RS27180;product=hypothetical protein;protein_id=WP_003400408.1;transl_table=11 NZ_KK316828.1 RefSeq gene 33396 34493 . + . ID=gene-AL55_RS05980;Name=AL55_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS05980;old_locus_tag=AL55_00034 NZ_KK316828.1 Protein Homology CDS 33396 34493 . + 0 ID=cds-WP_003400411.1;Parent=gene-AL55_RS05980;Dbxref=GenBank:WP_003400411.1;Name=WP_003400411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214543.1;locus_tag=AL55_RS05980;product=DUF5631 domain-containing protein;protein_id=WP_003400411.1;transl_table=11 NZ_KK316828.1 RefSeq gene 34563 34892 . + . ID=gene-AL55_RS05985;Name=AL55_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS05985;old_locus_tag=AL55_00035 NZ_KK316828.1 Protein Homology CDS 34563 34892 . + 0 ID=cds-WP_003400413.1;Parent=gene-AL55_RS05985;Dbxref=GenBank:WP_003400413.1;Name=WP_003400413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214544.1;locus_tag=AL55_RS05985;product=DUF2710 domain-containing protein;protein_id=WP_003400413.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 34906 35031 . + . ID=gene-AL55_RS28140;Name=AL55_RS28140;end_range=35031,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28140;partial=true;pseudo=true;start_range=.,34906 NZ_KK316828.1 Protein Homology CDS 34906 35031 . + 0 ID=cds-AL55_RS28140;Parent=gene-AL55_RS28140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=35031,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015630641.1;locus_tag=AL55_RS28140;partial=true;product=hypothetical protein;pseudo=true;start_range=.,34906;transl_table=11 NZ_KK316828.1 RefSeq gene 35634 37949 . + . ID=gene-AL55_RS05995;Name=AL55_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS05995;old_locus_tag=AL55_00037 NZ_KK316828.1 Protein Homology CDS 35634 37949 . + 0 ID=cds-WP_003901773.1;Parent=gene-AL55_RS05995;Dbxref=GenBank:WP_003901773.1;Name=WP_003901773.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214546.1;locus_tag=AL55_RS05995;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_003901773.1;transl_table=11 NZ_KK316828.1 RefSeq gene 37946 38209 . + . ID=gene-AL55_RS06000;Name=acpA;gbkey=Gene;gene=acpA;gene_biotype=protein_coding;locus_tag=AL55_RS06000;old_locus_tag=AL55_00038 NZ_KK316828.1 Protein Homology CDS 37946 38209 . + 0 ID=cds-WP_003400418.1;Parent=gene-AL55_RS06000;Dbxref=GenBank:WP_003400418.1;Name=WP_003400418.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;gene=acpA;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214547.1;locus_tag=AL55_RS06000;product=acyl carrier protein;protein_id=WP_003400418.1;transl_table=11 NZ_KK316828.1 RefSeq gene 38206 38601 . + . ID=gene-AL55_RS06005;Name=AL55_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06005;old_locus_tag=AL55_00039 NZ_KK316828.1 Protein Homology CDS 38206 38601 . + 0 ID=cds-WP_003400421.1;Parent=gene-AL55_RS06005;Dbxref=GenBank:WP_003400421.1;Name=WP_003400421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214548.1;locus_tag=AL55_RS06005;product=nuclear transport factor 2 family protein;protein_id=WP_003400421.1;transl_table=11 NZ_KK316828.1 RefSeq gene 38598 40286 . + . ID=gene-AL55_RS06010;Name=fadD34;gbkey=Gene;gene=fadD34;gene_biotype=protein_coding;locus_tag=AL55_RS06010;old_locus_tag=AL55_00040 NZ_KK316828.1 Protein Homology CDS 38598 40286 . + 0 ID=cds-WP_003906265.1;Parent=gene-AL55_RS06010;Dbxref=GenBank:WP_003906265.1;Name=WP_003906265.1;gbkey=CDS;gene=fadD34;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177686.1;locus_tag=AL55_RS06010;product=fatty acyl-AMP ligase FadD34;protein_id=WP_003906265.1;transl_table=11 NZ_KK316828.1 RefSeq gene 40395 41168 . - . ID=gene-AL55_RS06015;Name=AL55_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06015;old_locus_tag=AL55_00041 NZ_KK316828.1 Protein Homology CDS 40395 41168 . - 0 ID=cds-WP_003400427.1;Parent=gene-AL55_RS06015;Dbxref=GenBank:WP_003400427.1;Name=WP_003400427.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214550.1;locus_tag=AL55_RS06015;product=TIGR03084 family metal-binding protein;protein_id=WP_003400427.1;transl_table=11 NZ_KK316828.1 RefSeq gene 41216 42541 . - . ID=gene-AL55_RS06020;Name=AL55_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06020;old_locus_tag=AL55_00042 NZ_KK316828.1 Protein Homology CDS 41216 42541 . - 0 ID=cds-WP_003400431.1;Parent=gene-AL55_RS06020;Dbxref=GenBank:WP_003400431.1;Name=WP_003400431.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214551.1;locus_tag=AL55_RS06020;product=MFS transporter;protein_id=WP_003400431.1;transl_table=11 NZ_KK316828.1 RefSeq gene 42643 43251 . + . ID=gene-AL55_RS06025;Name=AL55_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06025;old_locus_tag=AL55_00043 NZ_KK316828.1 Protein Homology CDS 42643 43251 . + 0 ID=cds-WP_003400460.1;Parent=gene-AL55_RS06025;Dbxref=GenBank:WP_003400460.1;Name=WP_003400460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214552.1;locus_tag=AL55_RS06025;product=YqgE/AlgH family protein;protein_id=WP_003400460.1;transl_table=11 NZ_KK316828.1 RefSeq gene 43343 43690 . - . ID=gene-AL55_RS06030;Name=AL55_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06030;old_locus_tag=AL55_00044 NZ_KK316828.1 Protein Homology CDS 43343 43690 . - 0 ID=cds-WP_003400465.1;Parent=gene-AL55_RS06030;Dbxref=GenBank:WP_003400465.1;Name=WP_003400465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214553.1;locus_tag=AL55_RS06030;product=membrane protein;protein_id=WP_003400465.1;transl_table=11 NZ_KK316828.1 RefSeq gene 43772 44704 . - . ID=gene-AL55_RS06035;Name=AL55_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06035;old_locus_tag=AL55_00045 NZ_KK316828.1 Protein Homology CDS 43772 44704 . - 0 ID=cds-WP_003900793.1;Parent=gene-AL55_RS06035;Dbxref=GenBank:WP_003900793.1;Name=WP_003900793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214554.2;locus_tag=AL55_RS06035;product=LpqN/LpqT family lipoprotein;protein_id=WP_003900793.1;transl_table=11 NZ_KK316828.1 RefSeq gene 44901 47810 . + . ID=gene-AL55_RS06040;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AL55_RS06040;old_locus_tag=AL55_00046 NZ_KK316828.1 Protein Homology CDS 44901 47810 . + 0 ID=cds-WP_003902585.1;Parent=gene-AL55_RS06040;Dbxref=GenBank:WP_003902585.1;Name=WP_003902585.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214555.1;locus_tag=AL55_RS06040;product=leucine--tRNA ligase;protein_id=WP_003902585.1;transl_table=11 NZ_KK316828.1 RefSeq gene 47920 48423 . - . ID=gene-AL55_RS06045;Name=AL55_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06045;old_locus_tag=AL55_00047 NZ_KK316828.1 Protein Homology CDS 47920 48423 . - 0 ID=cds-WP_003912416.1;Parent=gene-AL55_RS06045;Dbxref=GenBank:WP_003912416.1;Name=WP_003912416.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007771688.1;locus_tag=AL55_RS06045;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003912416.1;transl_table=11 NZ_KK316828.1 RefSeq gene 48705 49439 . - . ID=gene-AL55_RS06050;Name=AL55_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06050;old_locus_tag=AL55_00048 NZ_KK316828.1 Protein Homology CDS 48705 49439 . - 0 ID=cds-WP_003899786.1;Parent=gene-AL55_RS06050;Dbxref=GenBank:WP_003899786.1;Name=WP_003899786.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214557.1;locus_tag=AL55_RS06050;product=GntR family transcriptional regulator;protein_id=WP_003899786.1;transl_table=11 NZ_KK316828.1 RefSeq gene 49572 50366 . - . ID=gene-AL55_RS06055;Name=AL55_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06055;old_locus_tag=AL55_00049 NZ_KK316828.1 Protein Homology CDS 49572 50366 . - 0 ID=cds-WP_003400486.1;Parent=gene-AL55_RS06055;Dbxref=GenBank:WP_003400486.1;Name=WP_003400486.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214558.1;locus_tag=AL55_RS06055;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003400486.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 50382 51277 . - . ID=gene-AL55_RS0104105;Name=AL55_RS0104105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0104105;old_locus_tag=AL55_00050;pseudo=true NZ_KK316828.1 Protein Homology CDS 50382 51277 . - 0 ID=cds-AL55_RS0104105;Parent=gene-AL55_RS0104105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214559.1;locus_tag=AL55_RS0104105;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 51359 52462 . - . ID=gene-AL55_RS06060;Name=AL55_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06060;old_locus_tag=AL55_00051 NZ_KK316828.1 Protein Homology CDS 51359 52462 . - 0 ID=cds-WP_003400492.1;Parent=gene-AL55_RS06060;Dbxref=GenBank:WP_003400492.1;Name=WP_003400492.1;Ontology_term=GO:0006021,GO:0008654,GO:0004512;gbkey=CDS;go_function=inositol-3-phosphate synthase activity|0004512||IEA;go_process=inositol biosynthetic process|0006021||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214560.1;locus_tag=AL55_RS06060;product=inositol-3-phosphate synthase;protein_id=WP_003400492.1;transl_table=11 NZ_KK316828.1 RefSeq gene 52523 53065 . - . ID=gene-AL55_RS06065;Name=AL55_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06065;old_locus_tag=AL55_00052 NZ_KK316828.1 Protein Homology CDS 52523 53065 . - 0 ID=cds-WP_003899787.1;Parent=gene-AL55_RS06065;Dbxref=GenBank:WP_003899787.1;Name=WP_003899787.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214561.1;locus_tag=AL55_RS06065;product=PadR family transcriptional regulator;protein_id=WP_003899787.1;transl_table=11 NZ_KK316828.1 RefSeq gene 53166 54035 . - . ID=gene-AL55_RS06070;Name=AL55_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06070;old_locus_tag=AL55_00053 NZ_KK316828.1 Protein Homology CDS 53166 54035 . - 0 ID=cds-WP_003400498.1;Parent=gene-AL55_RS06070;Dbxref=GenBank:WP_003400498.1;Name=WP_003400498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214562.1;locus_tag=AL55_RS06070;product=DUF1707 SHOCT-like domain-containing protein;protein_id=WP_003400498.1;transl_table=11 NZ_KK316828.1 RefSeq gene 54148 54582 . + . ID=gene-AL55_RS06075;Name=AL55_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06075;old_locus_tag=AL55_00054 NZ_KK316828.1 Protein Homology CDS 54148 54582 . + 0 ID=cds-WP_003899789.1;Parent=gene-AL55_RS06075;Dbxref=GenBank:WP_003899789.1;Name=WP_003899789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012392073.1;locus_tag=AL55_RS06075;product=DUF5318 family protein;protein_id=WP_003899789.1;transl_table=11 NZ_KK316828.1 RefSeq gene 54575 57046 . + . ID=gene-AL55_RS06080;Name=ponA1;gbkey=Gene;gene=ponA1;gene_biotype=protein_coding;locus_tag=AL55_RS06080;old_locus_tag=AL55_00055 NZ_KK316828.1 Protein Homology CDS 54575 57046 . + 0 ID=cds-WP_003907269.1;Parent=gene-AL55_RS06080;Dbxref=GenBank:WP_003907269.1;Name=WP_003907269.1;gbkey=CDS;gene=ponA1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899790.1;locus_tag=AL55_RS06080;product=transglycosylase/D%2CD-transpeptidase PonA1;protein_id=WP_003907269.1;transl_table=11 NZ_KK316828.1 RefSeq gene 57043 58725 . + . ID=gene-AL55_RS06085;Name=AL55_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06085;old_locus_tag=AL55_00056 NZ_KK316828.1 Protein Homology CDS 57043 58725 . + 0 ID=cds-WP_003400514.1;Parent=gene-AL55_RS06085;Dbxref=GenBank:WP_003400514.1;Name=WP_003400514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214565.1;locus_tag=AL55_RS06085;product=glycosyltransferase family 87 protein;protein_id=WP_003400514.1;transl_table=11 NZ_KK316828.1 RefSeq gene 58682 59320 . + . ID=gene-AL55_RS06090;Name=AL55_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06090;old_locus_tag=AL55_00057 NZ_KK316828.1 Protein Homology CDS 58682 59320 . + 0 ID=cds-WP_003912418.1;Parent=gene-AL55_RS06090;Dbxref=GenBank:WP_003912418.1;Name=WP_003912418.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912418.1;locus_tag=AL55_RS06090;product=DJ-1/PfpI family protein;protein_id=WP_003912418.1;transl_table=11 NZ_KK316828.1 RefSeq gene 59539 59829 . + . ID=gene-AL55_RS06095;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AL55_RS06095;old_locus_tag=AL55_00058 NZ_KK316828.1 Protein Homology CDS 59539 59829 . + 0 ID=cds-WP_003400520.1;Parent=gene-AL55_RS06095;Dbxref=GenBank:WP_003400520.1;Name=WP_003400520.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214567.1;locus_tag=AL55_RS06095;product=30S ribosomal protein S6;protein_id=WP_003400520.1;transl_table=11 NZ_KK316828.1 RefSeq gene 59933 60427 . + . ID=gene-AL55_RS06100;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=AL55_RS06100;old_locus_tag=AL55_00059 NZ_KK316828.1 Protein Homology CDS 59933 60427 . + 0 ID=cds-WP_003400534.1;Parent=gene-AL55_RS06100;Dbxref=GenBank:WP_003400534.1;Name=WP_003400534.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214568.1;locus_tag=AL55_RS06100;product=single-stranded DNA-binding protein;protein_id=WP_003400534.1;transl_table=11 NZ_KK316828.1 RefSeq gene 60469 60723 . + . ID=gene-AL55_RS06105;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AL55_RS06105;old_locus_tag=AL55_00060 NZ_KK316828.1 Protein Homology CDS 60469 60723 . + 0 ID=cds-WP_003400540.1;Parent=gene-AL55_RS06105;Dbxref=GenBank:WP_003400540.1;Name=WP_003400540.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874730.1;locus_tag=AL55_RS06105;product=30S ribosomal protein S18;protein_id=WP_003400540.1;transl_table=11 NZ_KK316828.1 RefSeq gene 60756 61214 . + . ID=gene-AL55_RS06110;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AL55_RS06110;old_locus_tag=AL55_00061 NZ_KK316828.1 Protein Homology CDS 60756 61214 . + 0 ID=cds-WP_003400543.1;Parent=gene-AL55_RS06110;Dbxref=GenBank:WP_003400543.1;Name=WP_003400543.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214570.1;locus_tag=AL55_RS06110;product=50S ribosomal protein L9;protein_id=WP_003400543.1;transl_table=11 NZ_KK316828.1 RefSeq gene 61743 64367 . + . ID=gene-AL55_RS06120;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=AL55_RS06120;old_locus_tag=AL55_00063 NZ_KK316828.1 Protein Homology CDS 61743 64367 . + 0 ID=cds-WP_003400547.1;Parent=gene-AL55_RS06120;Dbxref=GenBank:WP_003400547.1;Name=WP_003400547.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214572.1;locus_tag=AL55_RS06120;product=replicative DNA helicase;protein_id=WP_003400547.1;transl_table=11 NZ_KK316828.1 RefSeq gene 64547 65239 . + . ID=gene-AL55_RS06125;Name=darT;gbkey=Gene;gene=darT;gene_biotype=protein_coding;locus_tag=AL55_RS06125;old_locus_tag=AL55_00064 NZ_KK316828.1 Protein Homology CDS 64547 65239 . + 0 ID=cds-WP_003400548.1;Parent=gene-AL55_RS06125;Dbxref=GenBank:WP_003400548.1;Name=WP_003400548.1;gbkey=CDS;gene=darT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214573.1;locus_tag=AL55_RS06125;product=toxin-antitoxin system toxin DarT;protein_id=WP_003400548.1;transl_table=11 NZ_KK316828.1 RefSeq gene 65256 66314 . + . ID=gene-AL55_RS06130;Name=darG;gbkey=Gene;gene=darG;gene_biotype=protein_coding;locus_tag=AL55_RS06130;old_locus_tag=AL55_00065 NZ_KK316828.1 Protein Homology CDS 65256 66314 . + 0 ID=cds-WP_003400551.1;Parent=gene-AL55_RS06130;Dbxref=GenBank:WP_003400551.1;Name=WP_003400551.1;gbkey=CDS;gene=darG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214574.1;locus_tag=AL55_RS06130;product=toxin-antitoxin system antitoxin DNA ADP-ribosyl glycohydrolase DarG;protein_id=WP_003400551.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 66359 66697 . - . ID=gene-AL55_RS25460;Name=AL55_RS25460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25460;pseudo=true NZ_KK316828.1 Protein Homology CDS 66359 66697 . - 0 ID=cds-AL55_RS25460;Parent=gene-AL55_RS25460;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408697.1;locus_tag=AL55_RS25460;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 66899 68041 . + . ID=gene-AL55_RS06135;Name=AL55_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06135;old_locus_tag=AL55_00067 NZ_KK316828.1 Protein Homology CDS 66899 68041 . + 0 ID=cds-WP_003400562.1;Parent=gene-AL55_RS06135;Dbxref=GenBank:WP_003400562.1;Name=WP_003400562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177689.1;locus_tag=AL55_RS06135;product=glycoside hydrolase family 6 protein;protein_id=WP_003400562.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 68270 69710 . + . ID=gene-AL55_RS0104120;Name=AL55_RS0104120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0104120;old_locus_tag=AL55_00068;pseudo=true NZ_KK316828.1 Protein Homology CDS 68270 69710 . + 0 ID=cds-AL55_RS0104120;Parent=gene-AL55_RS0104120;Note=frameshifted;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214577.1;locus_tag=AL55_RS0104120;product=FAD-binding protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 69766 69927 . + . ID=gene-AL55_RS25465;Name=AL55_RS25465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25465 NZ_KK316828.1 Protein Homology CDS 69766 69927 . + 0 ID=cds-WP_003899796.1;Parent=gene-AL55_RS25465;Dbxref=GenBank:WP_003899796.1;Name=WP_003899796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030026.1;locus_tag=AL55_RS25465;product=hypothetical protein;protein_id=WP_003899796.1;transl_table=11 NZ_KK316828.1 RefSeq gene 69968 72907 . + . ID=gene-AL55_RS06140;Name=AL55_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06140;old_locus_tag=AL55_00069 NZ_KK316828.1 Protein Homology CDS 69968 72907 . + 0 ID=cds-WP_031695316.1;Parent=gene-AL55_RS06140;Dbxref=GenBank:WP_031695316.1;Name=WP_031695316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214578.1;locus_tag=AL55_RS06140;product=UPF0182 family protein;protein_id=WP_031695316.1;transl_table=11 NZ_KK316828.1 RefSeq gene 72974 73213 . + . ID=gene-AL55_RS06145;Name=AL55_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06145;old_locus_tag=AL55_00070 NZ_KK316828.1 Protein Homology CDS 72974 73213 . + 0 ID=cds-WP_003400577.1;Parent=gene-AL55_RS06145;Dbxref=GenBank:WP_003400577.1;Name=WP_003400577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408701.1;locus_tag=AL55_RS06145;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_003400577.1;transl_table=11 NZ_KK316828.1 RefSeq gene 73206 73607 . + . ID=gene-AL55_RS06150;Name=vapC1;gbkey=Gene;gene=vapC1;gene_biotype=protein_coding;locus_tag=AL55_RS06150;old_locus_tag=AL55_00071 NZ_KK316828.1 Protein Homology CDS 73206 73607 . + 0 ID=cds-WP_003400580.1;Parent=gene-AL55_RS06150;Dbxref=GenBank:WP_003400580.1;Name=WP_003400580.1;gbkey=CDS;gene=vapC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214579.1;locus_tag=AL55_RS06150;product=type II toxin-antitoxin system ribonuclease VapC1;protein_id=WP_003400580.1;transl_table=11 NZ_KK316828.1 RefSeq gene 73659 75896 . - . ID=gene-AL55_RS06155;Name=AL55_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06155;old_locus_tag=AL55_00072 NZ_KK316828.1 Protein Homology CDS 73659 75896 . - 0 ID=cds-WP_003899797.1;Parent=gene-AL55_RS06155;Dbxref=GenBank:WP_003899797.1;Name=WP_003899797.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214580.1;locus_tag=AL55_RS06155;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_003899797.1;transl_table=11 NZ_KK316828.1 RefSeq gene 76014 76583 . - . ID=gene-AL55_RS06160;Name=AL55_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06160;old_locus_tag=AL55_00073 NZ_KK316828.1 Protein Homology CDS 76014 76583 . - 0 ID=cds-WP_003400591.1;Parent=gene-AL55_RS06160;Dbxref=GenBank:WP_003400591.1;Name=WP_003400591.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214581.1;locus_tag=AL55_RS06160;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003400591.1;transl_table=11 NZ_KK316828.1 RefSeq gene 76686 77597 . + . ID=gene-AL55_RS06165;Name=AL55_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06165;old_locus_tag=AL55_00074 NZ_KK316828.1 Protein Homology CDS 76686 77597 . + 0 ID=cds-WP_003899798.1;Parent=gene-AL55_RS06165;Dbxref=GenBank:WP_003899798.1;Name=WP_003899798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214582.1;locus_tag=AL55_RS06165;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003899798.1;transl_table=11 NZ_KK316828.1 RefSeq gene 77622 79007 . - . ID=gene-AL55_RS06170;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=AL55_RS06170;old_locus_tag=AL55_00075 NZ_KK316828.1 Protein Homology CDS 77622 79007 . - 0 ID=cds-WP_003400600.1;Parent=gene-AL55_RS06170;Dbxref=GenBank:WP_003400600.1;Name=WP_003400600.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;gene=sdaA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214583.1;locus_tag=AL55_RS06170;product=L-serine ammonia-lyase;protein_id=WP_003400600.1;transl_table=11 NZ_KK316828.1 RefSeq gene 79004 80281 . - . ID=gene-AL55_RS06175;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AL55_RS06175;old_locus_tag=AL55_00076 NZ_KK316828.1 Protein Homology CDS 79004 80281 . - 0 ID=cds-WP_003899799.1;Parent=gene-AL55_RS06175;Dbxref=GenBank:WP_003899799.1;Name=WP_003899799.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214584.1;locus_tag=AL55_RS06175;product=serine hydroxymethyltransferase;protein_id=WP_003899799.1;transl_table=11 NZ_KK316828.1 cmsearch riboswitch 80589 80679 . - . ID=id-NZ_KK316828.1:80589..80679;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316828.1 RefSeq gene 80871 81938 . + . ID=gene-AL55_RS06180;Name=AL55_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06180;old_locus_tag=AL55_00078 NZ_KK316828.1 Protein Homology CDS 80871 81938 . + 0 ID=cds-WP_016810372.1;Parent=gene-AL55_RS06180;Dbxref=GenBank:WP_016810372.1;Name=WP_016810372.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902593.1;locus_tag=AL55_RS06180;product=amidohydrolase family protein;protein_id=WP_016810372.1;transl_table=11 NZ_KK316828.1 RefSeq gene 81951 83123 . + . ID=gene-AL55_RS06185;Name=AL55_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06185;old_locus_tag=AL55_00079 NZ_KK316828.1 Protein Homology CDS 81951 83123 . + 0 ID=cds-WP_003400622.1;Parent=gene-AL55_RS06185;Dbxref=GenBank:WP_003400622.1;Name=WP_003400622.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214589.1;locus_tag=AL55_RS06185;product=MalY/PatB family protein;protein_id=WP_003400622.1;transl_table=11 NZ_KK316828.1 RefSeq gene 83138 83518 . - . ID=gene-AL55_RS06190;Name=AL55_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06190;old_locus_tag=AL55_00080 NZ_KK316828.1 Protein Homology CDS 83138 83518 . - 0 ID=cds-WP_003913085.1;Parent=gene-AL55_RS06190;Dbxref=GenBank:WP_003913085.1;Name=WP_003913085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913085.1;locus_tag=AL55_RS06190;product=hypothetical protein;protein_id=WP_003913085.1;transl_table=11 NZ_KK316828.1 RefSeq gene 83591 84421 . - . ID=gene-AL55_RS06195;Name=AL55_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06195;old_locus_tag=AL55_00081 NZ_KK316828.1 Protein Homology CDS 83591 84421 . - 0 ID=cds-WP_003900801.1;Parent=gene-AL55_RS06195;Dbxref=GenBank:WP_003900801.1;Name=WP_003900801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214591.1;locus_tag=AL55_RS06195;product=alpha/beta fold hydrolase;protein_id=WP_003900801.1;transl_table=11 NZ_KK316828.1 RefSeq gene 84483 85088 . + . ID=gene-AL55_RS06200;Name=AL55_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06200;old_locus_tag=AL55_00082 NZ_KK316828.1 Protein Homology CDS 84483 85088 . + 0 ID=cds-WP_003899803.1;Parent=gene-AL55_RS06200;Dbxref=GenBank:WP_003899803.1;Name=WP_003899803.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214592.1;locus_tag=AL55_RS06200;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899803.1;transl_table=11 NZ_KK316828.1 RefSeq gene 85163 85756 . - . ID=gene-AL55_RS06205;Name=AL55_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06205;old_locus_tag=AL55_00083 NZ_KK316828.1 Protein Homology CDS 85163 85756 . - 0 ID=cds-WP_003901788.1;Parent=gene-AL55_RS06205;Dbxref=GenBank:WP_003901788.1;Name=WP_003901788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177616.1;locus_tag=AL55_RS06205;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_003901788.1;transl_table=11 NZ_KK316828.1 RefSeq gene 85753 85959 . - . ID=gene-AL55_RS06210;Name=AL55_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06210;old_locus_tag=AL55_00084 NZ_KK316828.1 Protein Homology CDS 85753 85959 . - 0 ID=cds-WP_003400649.1;Parent=gene-AL55_RS06210;Dbxref=GenBank:WP_003400649.1;Name=WP_003400649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408717.1;locus_tag=AL55_RS06210;product=hypothetical protein;protein_id=WP_003400649.1;transl_table=11 NZ_KK316828.1 RefSeq gene 86159 86980 . + . ID=gene-AL55_RS06215;Name=AL55_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06215;old_locus_tag=AL55_00085 NZ_KK316828.1 Protein Homology CDS 86159 86980 . + 0 ID=cds-WP_003400655.1;Parent=gene-AL55_RS06215;Dbxref=GenBank:WP_003400655.1;Name=WP_003400655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214593.1;locus_tag=AL55_RS06215;product=dormancy-associated translation inhibitor;protein_id=WP_003400655.1;transl_table=11 NZ_KK316828.1 RefSeq gene 86977 87435 . + . ID=gene-AL55_RS06220;Name=AL55_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06220;old_locus_tag=AL55_00086 NZ_KK316828.1 Protein Homology CDS 86977 87435 . + 0 ID=cds-WP_003899804.1;Parent=gene-AL55_RS06220;Dbxref=GenBank:WP_003899804.1;Name=WP_003899804.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214594.1;locus_tag=AL55_RS06220;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_003899804.1;transl_table=11 NZ_KK316828.1 RefSeq gene 87530 87874 . + . ID=gene-AL55_RS06225;Name=AL55_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06225;old_locus_tag=AL55_00087 NZ_KK316828.1 Protein Homology CDS 87530 87874 . + 0 ID=cds-WP_003400657.1;Parent=gene-AL55_RS06225;Dbxref=GenBank:WP_003400657.1;Name=WP_003400657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214595.1;locus_tag=AL55_RS06225;product=lsr2/espR transcriptional regulator;protein_id=WP_003400657.1;transl_table=11 NZ_KK316828.1 RefSeq gene 87879 88358 . + . ID=gene-AL55_RS06230;Name=AL55_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06230;old_locus_tag=AL55_00088 NZ_KK316828.1 Protein Homology CDS 87879 88358 . + 0 ID=cds-WP_003400658.1;Parent=gene-AL55_RS06230;Dbxref=GenBank:WP_003400658.1;Name=WP_003400658.1;Ontology_term=GO:0022900,GO:0008137,GO:0048038,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,quinone binding|0048038||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214596.2;locus_tag=AL55_RS06230;product=NADH-quinone oxidoreductase subunit B family protein;protein_id=WP_003400658.1;transl_table=11 NZ_KK316828.1 RefSeq gene 88355 90277 . + . ID=gene-AL55_RS06235;Name=AL55_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06235;old_locus_tag=AL55_00089 NZ_KK316828.1 Protein Homology CDS 88355 90277 . + 0 ID=cds-WP_003907280.1;Parent=gene-AL55_RS06235;Dbxref=GenBank:WP_003907280.1;Name=WP_003907280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214597.1;locus_tag=AL55_RS06235;product=oxidoreductase;protein_id=WP_003907280.1;transl_table=11 NZ_KK316828.1 RefSeq gene 90283 91233 . + . ID=gene-AL55_RS06240;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=AL55_RS06240;old_locus_tag=AL55_00090 NZ_KK316828.1 Protein Homology CDS 90283 91233 . + 0 ID=cds-WP_003900802.1;Parent=gene-AL55_RS06240;Dbxref=GenBank:WP_003900802.1;Name=WP_003900802.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;gene=hycD;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214598.1;locus_tag=AL55_RS06240;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_003900802.1;transl_table=11 NZ_KK316828.1 RefSeq gene 91244 91906 . + . ID=gene-AL55_RS06245;Name=AL55_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06245;old_locus_tag=AL55_00091 NZ_KK316828.1 Protein Homology CDS 91244 91906 . + 0 ID=cds-WP_003400661.1;Parent=gene-AL55_RS06245;Dbxref=GenBank:WP_003400661.1;Name=WP_003400661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214599.1;locus_tag=AL55_RS06245;product=hydrogenase HycP;protein_id=WP_003400661.1;transl_table=11 NZ_KK316828.1 RefSeq gene 91906 93372 . + . ID=gene-AL55_RS06250;Name=hycQ;gbkey=Gene;gene=hycQ;gene_biotype=protein_coding;locus_tag=AL55_RS06250;old_locus_tag=AL55_00092 NZ_KK316828.1 Protein Homology CDS 91906 93372 . + 0 ID=cds-WP_003400662.1;Parent=gene-AL55_RS06250;Dbxref=GenBank:WP_003400662.1;Name=WP_003400662.1;gbkey=CDS;gene=hycQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214600.1;locus_tag=AL55_RS06250;product=hydrogenase HycQ;protein_id=WP_003400662.1;transl_table=11 NZ_KK316828.1 RefSeq gene 93369 94847 . + . ID=gene-AL55_RS06255;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=AL55_RS06255;old_locus_tag=AL55_00093 NZ_KK316828.1 Protein Homology CDS 93369 94847 . + 0 ID=cds-WP_003400663.1;Parent=gene-AL55_RS06255;Dbxref=GenBank:WP_003400663.1;Name=WP_003400663.1;Ontology_term=GO:0008137;gbkey=CDS;gene=hycE;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214601.1;locus_tag=AL55_RS06255;product=hydrogenase large subunit;protein_id=WP_003400663.1;transl_table=11 NZ_KK316828.1 RefSeq gene 95077 95556 . + . ID=gene-AL55_RS0104140;Name=AL55_RS0104140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104140;old_locus_tag=AL55_00094 NZ_KK316828.1 Protein Homology CDS 95077 95556 . + 0 ID=cds-WP_003899806.1;Parent=gene-AL55_RS0104140;Dbxref=GenBank:WP_003899806.1;Name=WP_003899806.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899806.1;locus_tag=AL55_RS0104140;product=SRPBCC family protein;protein_id=WP_003899806.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 95701 96306 . + . ID=gene-AL55_RS06260;Name=AL55_RS06260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS06260;old_locus_tag=AL55_00095;partial=true;pseudo=true;start_range=.,95701 NZ_KK316828.1 Protein Homology CDS 95701 96306 . + 0 ID=cds-AL55_RS06260;Parent=gene-AL55_RS06260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019970694.1;locus_tag=AL55_RS06260;partial=true;product=class I SAM-dependent methyltransferase;pseudo=true;start_range=.,95701;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 96435 97195 . + . ID=gene-AL55_RS06265;Name=AL55_RS06265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS06265;old_locus_tag=AL55_00096;pseudo=true NZ_KK316828.1 Protein Homology CDS 96435 97195 . + 0 ID=cds-AL55_RS06265;Parent=gene-AL55_RS06265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214604.1;locus_tag=AL55_RS06265;product=DUF2127 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 97629 98396 . + . ID=gene-AL55_RS06270;Name=mtn;gbkey=Gene;gene=mtn;gene_biotype=protein_coding;locus_tag=AL55_RS06270;old_locus_tag=AL55_00097 NZ_KK316828.1 Protein Homology CDS 97629 98396 . + 0 ID=cds-WP_003400678.1;Parent=gene-AL55_RS06270;Dbxref=GenBank:WP_003400678.1;Name=WP_003400678.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtn;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214605.1;locus_tag=AL55_RS06270;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_003400678.1;transl_table=11 NZ_KK316828.1 RefSeq gene 98528 100813 . + . ID=gene-AL55_RS06275;Name=ctpA;gbkey=Gene;gene=ctpA;gene_biotype=protein_coding;locus_tag=AL55_RS06275;old_locus_tag=AL55_00098 NZ_KK316828.1 Protein Homology CDS 98528 100813 . + 0 ID=cds-WP_003899808.1;Parent=gene-AL55_RS06275;Dbxref=GenBank:WP_003899808.1;Name=WP_003899808.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=ctpA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214606.1;locus_tag=AL55_RS06275;product=heavy metal translocating P-type ATPase;protein_id=WP_003899808.1;transl_table=11 NZ_KK316828.1 RefSeq gene 100760 101470 . - . ID=gene-AL55_RS06280;Name=AL55_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06280;old_locus_tag=AL55_00099 NZ_KK316828.1 Protein Homology CDS 100760 101470 . - 0 ID=cds-WP_003912510.1;Parent=gene-AL55_RS06280;Dbxref=GenBank:WP_003912510.1;Name=WP_003912510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302401.1;locus_tag=AL55_RS06280;product=zf-HC2 domain-containing protein;protein_id=WP_003912510.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 101655 103050 . - . ID=gene-AL55_RS06285;Name=AL55_RS06285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS06285;old_locus_tag=AL55_00100;pseudo=true NZ_KK316828.1 Protein Homology CDS 101655 103050 . - 0 ID=cds-AL55_RS06285;Parent=gene-AL55_RS06285;Note=frameshifted;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001758.1;locus_tag=AL55_RS06285;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 103273 104664 . + . ID=gene-AL55_RS06290;Name=AL55_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06290;old_locus_tag=AL55_00102 NZ_KK316828.1 Protein Homology CDS 103273 104664 . + 0 ID=cds-WP_031695322.1;Parent=gene-AL55_RS06290;Dbxref=GenBank:WP_031695322.1;Name=WP_031695322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177690.1;locus_tag=AL55_RS06290;product=PPE family protein;protein_id=WP_031695322.1;transl_table=11 NZ_KK316828.1 RefSeq gene 104683 105552 . + . ID=gene-AL55_RS06295;Name=scoE;gbkey=Gene;gene=scoE;gene_biotype=protein_coding;locus_tag=AL55_RS06295;old_locus_tag=AL55_00103 NZ_KK316828.1 Protein Homology CDS 104683 105552 . + 0 ID=cds-WP_003400786.1;Parent=gene-AL55_RS06295;Dbxref=GenBank:WP_003400786.1;Name=WP_003400786.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;gene=scoE;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214611.1;locus_tag=AL55_RS06295;product=(3R)-3-[(carboxymethyl)amino]fatty acid oxygenase/decarboxylase;protein_id=WP_003400786.1;transl_table=11 NZ_KK316828.1 RefSeq gene 105549 106100 . + . ID=gene-AL55_RS06300;Name=fcoT;gbkey=Gene;gene=fcoT;gene_biotype=protein_coding;locus_tag=AL55_RS06300;old_locus_tag=AL55_00104 NZ_KK316828.1 Protein Homology CDS 105549 106100 . + 0 ID=cds-WP_003899810.1;Parent=gene-AL55_RS06300;Dbxref=GenBank:WP_003899810.1;Name=WP_003899810.1;gbkey=CDS;gene=fcoT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214612.1;locus_tag=AL55_RS06300;product=fatty acyl CoA thioesterase FcoT;protein_id=WP_003899810.1;transl_table=11 NZ_KK316828.1 RefSeq gene 106129 107727 . + . ID=gene-AL55_RS06305;Name=fadD10;gbkey=Gene;gene=fadD10;gene_biotype=protein_coding;locus_tag=AL55_RS06305;old_locus_tag=AL55_00105 NZ_KK316828.1 Protein Homology CDS 106129 107727 . + 0 ID=cds-WP_003916215.1;Parent=gene-AL55_RS06305;Dbxref=GenBank:WP_003916215.1;Name=WP_003916215.1;gbkey=CDS;gene=fadD10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916215.1;locus_tag=AL55_RS06305;product=fatty acid--CoA ligase FadD10;protein_id=WP_003916215.1;transl_table=11 NZ_KK316828.1 RefSeq gene 107732 107968 . + . ID=gene-AL55_RS06310;Name=AL55_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06310;old_locus_tag=AL55_00106 NZ_KK316828.1 Protein Homology CDS 107732 107968 . + 0 ID=cds-WP_003400793.1;Parent=gene-AL55_RS06310;Dbxref=GenBank:WP_003400793.1;Name=WP_003400793.1;Ontology_term=GO:0006633,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214614.1;locus_tag=AL55_RS06310;product=acyl carrier protein;protein_id=WP_003400793.1;transl_table=11 NZ_KK316828.1 RefSeq gene 107950 115488 . + . ID=gene-AL55_RS06315;Name=nrp;gbkey=Gene;gene=nrp;gene_biotype=protein_coding;locus_tag=AL55_RS06315;old_locus_tag=AL55_00107 NZ_KK316828.1 Protein Homology CDS 107950 115488 . + 0 ID=cds-WP_003400794.1;Parent=gene-AL55_RS06315;Dbxref=GenBank:WP_003400794.1;Name=WP_003400794.1;Ontology_term=GO:1904091;gbkey=CDS;gene=nrp;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214615.1;locus_tag=AL55_RS06315;product=non-ribosomal peptide synthetase Nrp;protein_id=WP_003400794.1;transl_table=11 NZ_KK316828.1 RefSeq gene 115663 117648 . + . ID=gene-AL55_RS06320;Name=AL55_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06320;old_locus_tag=AL55_00108 NZ_KK316828.1 Protein Homology CDS 115663 117648 . + 0 ID=cds-WP_003900808.1;Parent=gene-AL55_RS06320;Dbxref=GenBank:WP_003900808.1;Name=WP_003900808.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214616.1;locus_tag=AL55_RS06320;product=cytochrome c oxidase assembly protein;protein_id=WP_003900808.1;transl_table=11 NZ_KK316828.1 RefSeq gene 117864 120122 . - . ID=gene-AL55_RS06325;Name=ctpB;gbkey=Gene;gene=ctpB;gene_biotype=protein_coding;locus_tag=AL55_RS06325;old_locus_tag=AL55_00109 NZ_KK316828.1 Protein Homology CDS 117864 120122 . - 0 ID=cds-WP_031695325.1;Parent=gene-AL55_RS06325;Dbxref=GenBank:WP_031695325.1;Name=WP_031695325.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=ctpB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214617.1;locus_tag=AL55_RS06325;product=heavy metal translocating P-type ATPase;protein_id=WP_031695325.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 120266 121780 . + . ID=gene-AL55_RS06330;Name=AL55_RS06330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS06330;old_locus_tag=AL55_00110;pseudo=true NZ_KK316828.1 Protein Homology CDS 120266 121780 . + 0 ID=cds-AL55_RS06330;Parent=gene-AL55_RS06330;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214618.1;locus_tag=AL55_RS06330;product=cyclic nucleotide-binding domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 121814 121919 . - . ID=gene-AL55_RS26840;Name=AL55_RS26840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS26840;partial=true;pseudo=true;start_range=.,121814 NZ_KK316828.1 Protein Homology CDS 121814 121919 . - 0 ID=cds-AL55_RS26840;Parent=gene-AL55_RS26840;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005063154.1;locus_tag=AL55_RS26840;partial=true;product=50S ribosomal protein L33;pseudo=true;start_range=.,121814;transl_table=11 NZ_KK316828.1 RefSeq gene 121929 122213 . - . ID=gene-AL55_RS06335;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AL55_RS06335;old_locus_tag=AL55_00111 NZ_KK316828.1 Protein Homology CDS 121929 122213 . - 0 ID=cds-WP_003400802.1;Parent=gene-AL55_RS06335;Dbxref=GenBank:WP_003400802.1;Name=WP_003400802.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177691.1;locus_tag=AL55_RS06335;product=50S ribosomal protein L28;protein_id=WP_003400802.1;transl_table=11 NZ_KK316828.1 RefSeq gene 122323 123519 . + . ID=gene-AL55_RS06340;Name=mrf;gbkey=Gene;gene=mrf;gene_biotype=protein_coding;locus_tag=AL55_RS06340;old_locus_tag=AL55_00112 NZ_KK316828.1 Protein Homology CDS 122323 123519 . + 0 ID=cds-WP_003400804.1;Parent=gene-AL55_RS06340;Dbxref=GenBank:WP_003400804.1;Name=WP_003400804.1;gbkey=CDS;gene=mrf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214620.1;locus_tag=AL55_RS06340;product=ribosome hibernation factor-recruiting GTPase MRF;protein_id=WP_003400804.1;transl_table=11 NZ_KK316828.1 RefSeq gene 123614 128491 . - . ID=gene-AL55_RS06345;Name=ctpI;gbkey=Gene;gene=ctpI;gene_biotype=protein_coding;locus_tag=AL55_RS06345;old_locus_tag=AL55_00113 NZ_KK316828.1 Protein Homology CDS 123614 128491 . - 0 ID=cds-WP_031721586.1;Parent=gene-AL55_RS06345;Dbxref=GenBank:WP_031721586.1;Name=WP_031721586.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;gene=ctpI;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400807.1;locus_tag=AL55_RS06345;product=cation-translocating P-type ATPase;protein_id=WP_031721586.1;transl_table=11 NZ_KK316828.1 RefSeq gene 128845 129078 . - . ID=gene-AL55_RS06350;Name=AL55_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06350;old_locus_tag=AL55_00114 NZ_KK316828.1 Protein Homology CDS 128845 129078 . - 0 ID=cds-WP_003899816.1;Parent=gene-AL55_RS06350;Dbxref=GenBank:WP_003899816.1;Name=WP_003899816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015354093.1;locus_tag=AL55_RS06350;product=hypothetical protein;protein_id=WP_003899816.1;transl_table=11 NZ_KK316828.1 RefSeq gene 129333 130823 . + . ID=gene-AL55_RS06355;Name=AL55_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06355;old_locus_tag=AL55_00115 NZ_KK316828.1 Protein Homology CDS 129333 130823 . + 0 ID=cds-WP_003909149.1;Parent=gene-AL55_RS06355;Dbxref=GenBank:WP_003909149.1;Name=WP_003909149.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177692.1;locus_tag=AL55_RS06355;product=PE family protein;protein_id=WP_003909149.1;transl_table=11 NZ_KK316828.1 RefSeq gene 130866 131720 . + . ID=gene-AL55_RS06360;Name=AL55_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06360;old_locus_tag=AL55_00116 NZ_KK316828.1 Protein Homology CDS 130866 131720 . + 0 ID=cds-WP_003899818.1;Parent=gene-AL55_RS06360;Dbxref=GenBank:WP_003899818.1;Name=WP_003899818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899818.1;locus_tag=AL55_RS06360;product=rhomboid family intramembrane serine protease;protein_id=WP_003899818.1;transl_table=11 NZ_KK316828.1 RefSeq gene 131901 133958 . + . ID=gene-AL55_RS06365;Name=AL55_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06365;old_locus_tag=AL55_00117 NZ_KK316828.1 Protein Homology CDS 131901 133958 . + 0 ID=cds-WP_003900811.1;Parent=gene-AL55_RS06365;Dbxref=GenBank:WP_003900811.1;Name=WP_003900811.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214625.1;locus_tag=AL55_RS06365;product=acyltransferase family protein;protein_id=WP_003900811.1;transl_table=11 NZ_KK316828.1 RefSeq gene 134240 135196 . + . ID=gene-AL55_RS06370;Name=gca;gbkey=Gene;gene=gca;gene_biotype=protein_coding;locus_tag=AL55_RS06370;old_locus_tag=AL55_00118 NZ_KK316828.1 Protein Homology CDS 134240 135196 . + 0 ID=cds-WP_003400829.1;Parent=gene-AL55_RS06370;Dbxref=GenBank:WP_003400829.1;Name=WP_003400829.1;gbkey=CDS;gene=gca;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214626.1;locus_tag=AL55_RS06370;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_003400829.1;transl_table=11 NZ_KK316828.1 RefSeq gene 135270 135860 . + . ID=gene-AL55_RS06375;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=AL55_RS06375;old_locus_tag=AL55_00119 NZ_KK316828.1 Protein Homology CDS 135270 135860 . + 0 ID=cds-WP_003400839.1;Parent=gene-AL55_RS06375;Dbxref=GenBank:WP_003400839.1;Name=WP_003400839.1;gbkey=CDS;gene=gmhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214627.1;locus_tag=AL55_RS06375;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_003400839.1;transl_table=11 NZ_KK316828.1 RefSeq gene 135892 136464 . + . ID=gene-AL55_RS06380;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=AL55_RS06380;old_locus_tag=AL55_00120 NZ_KK316828.1 Protein Homology CDS 135892 136464 . + 0 ID=cds-WP_003400840.1;Parent=gene-AL55_RS06380;Dbxref=GenBank:WP_003400840.1;Name=WP_003400840.1;gbkey=CDS;gene=gmhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214628.1;locus_tag=AL55_RS06380;product=D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_003400840.1;transl_table=11 NZ_KK316828.1 RefSeq gene 136464 137624 . + . ID=gene-AL55_RS06385;Name=hddA;gbkey=Gene;gene=hddA;gene_biotype=protein_coding;locus_tag=AL55_RS06385;old_locus_tag=AL55_00121 NZ_KK316828.1 Protein Homology CDS 136464 137624 . + 0 ID=cds-WP_003902603.1;Parent=gene-AL55_RS06385;Dbxref=GenBank:WP_003902603.1;Name=WP_003902603.1;Ontology_term=GO:0005524;gbkey=CDS;gene=hddA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214629.1;locus_tag=AL55_RS06385;product=GHMP family kinase ATP-binding protein;protein_id=WP_003902603.1;transl_table=11 NZ_KK316828.1 RefSeq gene 137907 138095 . + . ID=gene-AL55_RS0104155;Name=AL55_RS0104155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104155 NZ_KK316828.1 Protein Homology CDS 137907 138095 . + 0 ID=cds-WP_003400850.1;Parent=gene-AL55_RS0104155;Dbxref=GenBank:WP_003400850.1;Name=WP_003400850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030027.1;locus_tag=AL55_RS0104155;product=hypothetical protein;protein_id=WP_003400850.1;transl_table=11 NZ_KK316828.1 RefSeq gene 138218 138973 . - . ID=gene-AL55_RS06390;Name=ldtMt1;gbkey=Gene;gene=ldtMt1;gene_biotype=protein_coding;locus_tag=AL55_RS06390;old_locus_tag=AL55_00122 NZ_KK316828.1 Protein Homology CDS 138218 138973 . - 0 ID=cds-WP_003400856.1;Parent=gene-AL55_RS06390;Dbxref=GenBank:WP_003400856.1;Name=WP_003400856.1;gbkey=CDS;gene=ldtMt1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214630.1;locus_tag=AL55_RS06390;product=L%2CD-transpeptidase LdtMt1;protein_id=WP_003400856.1;transl_table=11 NZ_KK316828.1 RefSeq gene 139151 140095 . + . ID=gene-AL55_RS06395;Name=oxyS;gbkey=Gene;gene=oxyS;gene_biotype=protein_coding;locus_tag=AL55_RS06395;old_locus_tag=AL55_00123 NZ_KK316828.1 Protein Homology CDS 139151 140095 . + 0 ID=cds-WP_003906284.1;Parent=gene-AL55_RS06395;Dbxref=GenBank:WP_003906284.1;Name=WP_003906284.1;gbkey=CDS;gene=oxyS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214631.1;locus_tag=AL55_RS06395;product=LysR family transcriptional regulator OxyS;protein_id=WP_003906284.1;transl_table=11 NZ_KK316828.1 RefSeq gene 140079 141827 . - . ID=gene-AL55_RS06400;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;locus_tag=AL55_RS06400;old_locus_tag=AL55_00124 NZ_KK316828.1 Protein Homology CDS 140079 141827 . - 0 ID=cds-WP_003400858.1;Parent=gene-AL55_RS06400;Dbxref=GenBank:WP_003400858.1;Name=WP_003400858.1;Ontology_term=GO:0033611,GO:0000287,GO:0008949,GO:0030976;gbkey=CDS;gene=oxc;go_function=magnesium ion binding|0000287||IEA,oxalyl-CoA decarboxylase activity|0008949||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214632.1;locus_tag=AL55_RS06400;product=oxalyl-CoA decarboxylase;protein_id=WP_003400858.1;transl_table=11 NZ_KK316828.1 RefSeq gene 142000 143577 . + . ID=gene-AL55_RS06405;Name=AL55_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06405;old_locus_tag=AL55_00125 NZ_KK316828.1 Protein Homology CDS 142000 143577 . + 0 ID=cds-WP_003901806.1;Parent=gene-AL55_RS06405;Dbxref=GenBank:WP_003901806.1;Name=WP_003901806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214633.1;locus_tag=AL55_RS06405;product=FadD7 family fatty acid--CoA ligase;protein_id=WP_003901806.1;transl_table=11 NZ_KK316828.1 RefSeq gene 143578 145722 . - . ID=gene-AL55_RS06410;Name=AL55_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06410;old_locus_tag=AL55_00126 NZ_KK316828.1 Protein Homology CDS 143578 145722 . - 0 ID=cds-WP_003901807.1;Parent=gene-AL55_RS06410;Dbxref=GenBank:WP_003901807.1;Name=WP_003901807.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214634.1;locus_tag=AL55_RS06410;product=elongation factor G-like protein EF-G2;protein_id=WP_003901807.1;transl_table=11 NZ_KK316828.1 RefSeq gene 145859 146293 . - . ID=gene-AL55_RS06415;Name=AL55_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06415;old_locus_tag=AL55_00127 NZ_KK316828.1 Protein Homology CDS 145859 146293 . - 0 ID=cds-WP_003400864.1;Parent=gene-AL55_RS06415;Dbxref=GenBank:WP_003400864.1;Name=WP_003400864.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214635.1;locus_tag=AL55_RS06415;product=TIGR03668 family PPOX class F420-dependent oxidoreductase;protein_id=WP_003400864.1;transl_table=11 NZ_KK316828.1 RefSeq gene 146442 146810 . + . ID=gene-AL55_RS06420;Name=AL55_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06420;old_locus_tag=AL55_00128 NZ_KK316828.1 Protein Homology CDS 146442 146810 . + 0 ID=cds-WP_003400865.1;Parent=gene-AL55_RS06420;Dbxref=GenBank:WP_003400865.1;Name=WP_003400865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214636.1;locus_tag=AL55_RS06420;product=hypothetical protein;protein_id=WP_003400865.1;transl_table=11 NZ_KK316828.1 RefSeq gene 146807 147175 . + . ID=gene-AL55_RS06425;Name=AL55_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06425;old_locus_tag=AL55_00129 NZ_KK316828.1 Protein Homology CDS 146807 147175 . + 0 ID=cds-WP_003400878.1;Parent=gene-AL55_RS06425;Dbxref=GenBank:WP_003400878.1;Name=WP_003400878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214637.1;locus_tag=AL55_RS06425;product=hypothetical protein;protein_id=WP_003400878.1;transl_table=11 NZ_KK316828.1 RefSeq gene 147484 149109 . + . ID=gene-AL55_RS06430;Name=AL55_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06430;old_locus_tag=AL55_00130 NZ_KK316828.1 Protein Homology CDS 147484 149109 . + 0 ID=cds-WP_009939628.1;Parent=gene-AL55_RS06430;Dbxref=GenBank:WP_009939628.1;Name=WP_009939628.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288800.1;locus_tag=AL55_RS06430;product=PE family protein;protein_id=WP_009939628.1;transl_table=11 NZ_KK316828.1 RefSeq gene 149261 150328 . + . ID=gene-AL55_RS06435;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=AL55_RS06435;old_locus_tag=AL55_00131 NZ_KK316828.1 Protein Homology CDS 149261 150328 . + 0 ID=cds-WP_003400885.1;Parent=gene-AL55_RS06435;Dbxref=GenBank:WP_003400885.1;Name=WP_003400885.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=pepA;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214639.1;locus_tag=AL55_RS06435;product=S1C family serine protease;protein_id=WP_003400885.1;transl_table=11 NZ_KK316828.1 RefSeq gene 150437 152242 . + . ID=gene-AL55_RS06440;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=AL55_RS06440;old_locus_tag=AL55_00132 NZ_KK316828.1 Protein Homology CDS 150437 152242 . + 0 ID=cds-WP_003400893.1;Parent=gene-AL55_RS06440;Dbxref=GenBank:WP_003400893.1;Name=WP_003400893.1;Ontology_term=GO:0005991,GO:0047471;gbkey=CDS;gene=treS;go_function=maltose alpha-D-glucosyltransferase activity|0047471||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214640.1;locus_tag=AL55_RS06440;product=maltose alpha-D-glucosyltransferase;protein_id=WP_003400893.1;transl_table=11 NZ_KK316828.1 RefSeq gene 152345 153712 . + . ID=gene-AL55_RS06445;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=AL55_RS06445;old_locus_tag=AL55_00133 NZ_KK316828.1 Protein Homology CDS 152345 153712 . + 0 ID=cds-WP_003899824.1;Parent=gene-AL55_RS06445;Dbxref=GenBank:WP_003899824.1;Name=WP_003899824.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214641.1;locus_tag=AL55_RS06445;product=maltokinase;protein_id=WP_003899824.1;transl_table=11 NZ_KK316828.1 RefSeq gene 153780 154559 . + . ID=gene-AL55_RS06450;Name=AL55_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06450;old_locus_tag=AL55_00134 NZ_KK316828.1 Protein Homology CDS 153780 154559 . + 0 ID=cds-WP_003899825.1;Parent=gene-AL55_RS06450;Dbxref=GenBank:WP_003899825.1;Name=WP_003899825.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214642.1;locus_tag=AL55_RS06450;product=YoaK family protein;protein_id=WP_003899825.1;transl_table=11 NZ_KK316828.1 RefSeq gene 154691 155713 . - . ID=gene-AL55_RS06455;Name=ag85C;gbkey=Gene;gene=ag85C;gene_biotype=protein_coding;gene_synonym=fbpC;locus_tag=AL55_RS06455;old_locus_tag=AL55_00135 NZ_KK316828.1 Protein Homology CDS 154691 155713 . - 0 ID=cds-WP_003400908.1;Parent=gene-AL55_RS06455;Dbxref=GenBank:WP_003400908.1;Name=WP_003400908.1;gbkey=CDS;gene=ag85C;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177694.1;locus_tag=AL55_RS06455;product=diacylglycerol acyltransferase/mycolyltransferase Ag85C;protein_id=WP_003400908.1;transl_table=11 NZ_KK316828.1 RefSeq gene 155960 156415 . + . ID=gene-AL55_RS06460;Name=htdZ;gbkey=Gene;gene=htdZ;gene_biotype=protein_coding;locus_tag=AL55_RS06460;old_locus_tag=AL55_00136 NZ_KK316828.1 Protein Homology CDS 155960 156415 . + 0 ID=cds-WP_003400912.1;Parent=gene-AL55_RS06460;Dbxref=GenBank:WP_003400912.1;Name=WP_003400912.1;gbkey=CDS;gene=htdZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214644.1;locus_tag=AL55_RS06460;product=3-hydroxyacyl-thioester dehydratase HtdZ;protein_id=WP_003400912.1;transl_table=11 NZ_KK316828.1 RefSeq gene 156428 157771 . - . ID=gene-AL55_RS06465;Name=AL55_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06465;old_locus_tag=AL55_00137 NZ_KK316828.1 Protein Homology CDS 156428 157771 . - 0 ID=cds-WP_044501773.1;Parent=gene-AL55_RS06465;Dbxref=GenBank:WP_044501773.1;Name=WP_044501773.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020731414.1;locus_tag=AL55_RS06465;product=acyl-CoA dehydrogenase family protein;protein_id=WP_044501773.1;transl_table=11 NZ_KK316828.1 RefSeq gene 157813 158895 . - . ID=gene-AL55_RS06470;Name=AL55_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06470;old_locus_tag=AL55_00138 NZ_KK316828.1 Protein Homology CDS 157813 158895 . - 0 ID=cds-WP_003899826.1;Parent=gene-AL55_RS06470;Dbxref=GenBank:WP_003899826.1;Name=WP_003899826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214646.1;locus_tag=AL55_RS06470;product=F420-dependent hydroxymycolic acid dehydrogenase;protein_id=WP_003899826.1;transl_table=11 NZ_KK316828.1 RefSeq gene 158982 159587 . + . ID=gene-AL55_RS06475;Name=AL55_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06475;old_locus_tag=AL55_00139 NZ_KK316828.1 Protein Homology CDS 158982 159587 . + 0 ID=cds-WP_003400924.1;Parent=gene-AL55_RS06475;Dbxref=GenBank:WP_003400924.1;Name=WP_003400924.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214647.1;locus_tag=AL55_RS06475;product=GNAT family N-acetyltransferase;protein_id=WP_003400924.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 159884 160785 . + . ID=gene-AL55_RS0104160;Name=ephF;gbkey=Gene;gene=ephF;gene_biotype=pseudogene;locus_tag=AL55_RS0104160;pseudo=true NZ_KK316828.1 Protein Homology CDS 159884 160785 . + 0 ID=cds-AL55_RS0104160;Parent=gene-AL55_RS0104160;Note=frameshifted;gbkey=CDS;gene=ephF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214648.1;locus_tag=AL55_RS0104160;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 160756 161361 . - . ID=gene-AL55_RS06480;Name=AL55_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06480;old_locus_tag=AL55_00141 NZ_KK316828.1 Protein Homology CDS 160756 161361 . - 0 ID=cds-WP_003400935.1;Parent=gene-AL55_RS06480;Dbxref=GenBank:WP_003400935.1;Name=WP_003400935.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214649.1;locus_tag=AL55_RS06480;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003400935.1;transl_table=11 NZ_KK316828.1 RefSeq gene 161478 162803 . + . ID=gene-AL55_RS06485;Name=AL55_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06485;old_locus_tag=AL55_00142 NZ_KK316828.1 Protein Homology CDS 161478 162803 . + 0 ID=cds-WP_003906289.1;Parent=gene-AL55_RS06485;Dbxref=GenBank:WP_003906289.1;Name=WP_003906289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214650.1;locus_tag=AL55_RS06485;product=cytochrome P450;protein_id=WP_003906289.1;transl_table=11 NZ_KK316828.1 RefSeq gene 162824 163372 . - . ID=gene-AL55_RS06490;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=AL55_RS06490;old_locus_tag=AL55_00143 NZ_KK316828.1 Protein Homology CDS 162824 163372 . - 0 ID=cds-WP_003400942.1;Parent=gene-AL55_RS06490;Dbxref=GenBank:WP_003400942.1;Name=WP_003400942.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214651.1;locus_tag=AL55_RS06490;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_003400942.1;transl_table=11 NZ_KK316828.1 RefSeq gene 163435 163938 . + . ID=gene-AL55_RS06495;Name=AL55_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06495;old_locus_tag=AL55_00144 NZ_KK316828.1 Protein Homology CDS 163435 163938 . + 0 ID=cds-WP_003400945.1;Parent=gene-AL55_RS06495;Dbxref=GenBank:WP_003400945.1;Name=WP_003400945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214652.1;locus_tag=AL55_RS06495;product=nuclear transport factor 2 family protein;protein_id=WP_003400945.1;transl_table=11 NZ_KK316828.1 RefSeq gene 163939 164961 . + . ID=gene-AL55_RS06500;Name=AL55_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06500;old_locus_tag=AL55_00145 NZ_KK316828.1 Protein Homology CDS 163939 164961 . + 0 ID=cds-WP_003400947.1;Parent=gene-AL55_RS06500;Dbxref=GenBank:WP_003400947.1;Name=WP_003400947.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214653.1;locus_tag=AL55_RS06500;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003400947.1;transl_table=11 NZ_KK316828.1 RefSeq gene 165022 165402 . + . ID=gene-AL55_RS06505;Name=AL55_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06505;old_locus_tag=AL55_00146 NZ_KK316828.1 Protein Homology CDS 165022 165402 . + 0 ID=cds-WP_003400949.1;Parent=gene-AL55_RS06505;Dbxref=GenBank:WP_003400949.1;Name=WP_003400949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214654.1;locus_tag=AL55_RS06505;product=DUF427 domain-containing protein;protein_id=WP_003400949.1;transl_table=11 NZ_KK316828.1 RefSeq gene 165383 165793 . - . ID=gene-AL55_RS06510;Name=AL55_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06510;old_locus_tag=AL55_00147 NZ_KK316828.1 Protein Homology CDS 165383 165793 . - 0 ID=cds-WP_003400951.1;Parent=gene-AL55_RS06510;Dbxref=GenBank:WP_003400951.1;Name=WP_003400951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214655.1;locus_tag=AL55_RS06510;product=nuclear transport factor 2 family protein;protein_id=WP_003400951.1;transl_table=11 NZ_KK316828.1 RefSeq gene 165823 166749 . + . ID=gene-AL55_RS06515;Name=AL55_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06515;old_locus_tag=AL55_00148 NZ_KK316828.1 Protein Homology CDS 165823 166749 . + 0 ID=cds-WP_003400956.1;Parent=gene-AL55_RS06515;Dbxref=GenBank:WP_003400956.1;Name=WP_003400956.1;Ontology_term=GO:0006281,GO:0019104,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214656.1;locus_tag=AL55_RS06515;product=DNA-3-methyladenine glycosylase family protein;protein_id=WP_003400956.1;transl_table=11 NZ_KK316828.1 RefSeq gene 166816 168294 . - . ID=gene-AL55_RS06520;Name=AL55_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06520;old_locus_tag=AL55_00149 NZ_KK316828.1 Protein Homology CDS 166816 168294 . - 0 ID=cds-WP_003899828.1;Parent=gene-AL55_RS06520;Dbxref=GenBank:WP_003899828.1;Name=WP_003899828.1;Ontology_term=GO:0005247,GO:0034707;gbkey=CDS;go_component=chloride channel complex|0034707||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214657.1;locus_tag=AL55_RS06520;product=chloride channel protein;protein_id=WP_003899828.1;transl_table=11 NZ_KK316828.1 RefSeq gene 168603 169238 . + . ID=gene-AL55_RS0104165;Name=AL55_RS0104165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104165;old_locus_tag=AL55_00150 NZ_KK316828.1 Protein Homology CDS 168603 169238 . + 0 ID=cds-WP_003911117.1;Parent=gene-AL55_RS0104165;Dbxref=GenBank:WP_003911117.1;Name=WP_003911117.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911117.1;locus_tag=AL55_RS0104165;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003911117.1;transl_table=11 NZ_KK316828.1 RefSeq gene 169327 170280 . + . ID=gene-AL55_RS06525;Name=AL55_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06525;old_locus_tag=AL55_00151 NZ_KK316828.1 Protein Homology CDS 169327 170280 . + 0 ID=cds-WP_003899829.1;Parent=gene-AL55_RS06525;Dbxref=GenBank:WP_003899829.1;Name=WP_003899829.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214659.1;locus_tag=AL55_RS06525;product=class I SAM-dependent methyltransferase;protein_id=WP_003899829.1;transl_table=11 NZ_KK316828.1 RefSeq gene 170323 171255 . + . ID=gene-AL55_RS06530;Name=AL55_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06530;old_locus_tag=AL55_00152 NZ_KK316828.1 Protein Homology CDS 170323 171255 . + 0 ID=cds-WP_003900814.1;Parent=gene-AL55_RS06530;Dbxref=GenBank:WP_003900814.1;Name=WP_003900814.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214660.1;locus_tag=AL55_RS06530;product=class I SAM-dependent methyltransferase;protein_id=WP_003900814.1;transl_table=11 NZ_KK316828.1 RefSeq gene 171395 172870 . + . ID=gene-AL55_RS06535;Name=AL55_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06535;old_locus_tag=AL55_00153 NZ_KK316828.1 Protein Homology CDS 171395 172870 . + 0 ID=cds-WP_003913557.1;Parent=gene-AL55_RS06535;Dbxref=GenBank:WP_003913557.1;Name=WP_003913557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016705823.1;locus_tag=AL55_RS06535;product=aldehyde dehydrogenase family protein;protein_id=WP_003913557.1;transl_table=11 NZ_KK316828.1 RefSeq gene 172945 173805 . + . ID=gene-AL55_RS06540;Name=AL55_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06540;old_locus_tag=AL55_00154 NZ_KK316828.1 Protein Homology CDS 172945 173805 . + 0 ID=cds-WP_003400979.1;Parent=gene-AL55_RS06540;Dbxref=GenBank:WP_003400979.1;Name=WP_003400979.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214662.1;locus_tag=AL55_RS06540;product=SDR family oxidoreductase;protein_id=WP_003400979.1;transl_table=11 NZ_KK316828.1 RefSeq gene 173812 174780 . + . ID=gene-AL55_RS06545;Name=AL55_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06545;old_locus_tag=AL55_00155 NZ_KK316828.1 Protein Homology CDS 173812 174780 . + 0 ID=cds-WP_003400985.1;Parent=gene-AL55_RS06545;Dbxref=GenBank:WP_003400985.1;Name=WP_003400985.1;Ontology_term=GO:0016491,GO:0016655,GO:0048038,GO:0070402;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214663.1;locus_tag=AL55_RS06545;product=NADPH:quinone oxidoreductase family protein;protein_id=WP_003400985.1;transl_table=11 NZ_KK316828.1 RefSeq gene 174777 175064 . - . ID=gene-AL55_RS06550;Name=AL55_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06550;old_locus_tag=AL55_00156 NZ_KK316828.1 Protein Homology CDS 174777 175064 . - 0 ID=cds-WP_003400989.1;Parent=gene-AL55_RS06550;Dbxref=GenBank:WP_003400989.1;Name=WP_003400989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214664.1;locus_tag=AL55_RS06550;product=hypothetical protein;protein_id=WP_003400989.1;transl_table=11 NZ_KK316828.1 RefSeq gene 175655 177307 . - . ID=gene-AL55_RS06555;Name=AL55_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06555;old_locus_tag=AL55_00157 NZ_KK316828.1 Protein Homology CDS 175655 177307 . - 0 ID=cds-WP_023637327.1;Parent=gene-AL55_RS06555;Dbxref=GenBank:WP_023637327.1;Name=WP_023637327.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912517.1;locus_tag=AL55_RS06555;product=PE family protein;protein_id=WP_023637327.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 177487 179141 . - . ID=gene-AL55_RS06560;Name=AL55_RS06560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS06560;old_locus_tag=AL55_00158;pseudo=true NZ_KK316828.1 Protein Homology CDS 177487 179141 . - 0 ID=cds-AL55_RS06560;Parent=gene-AL55_RS06560;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020730540.1;locus_tag=AL55_RS06560;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 179267 180097 . - . ID=gene-AL55_RS06565;Name=ptbB;gbkey=Gene;gene=ptbB;gene_biotype=protein_coding;locus_tag=AL55_RS06565;old_locus_tag=AL55_00159 NZ_KK316828.1 Protein Homology CDS 179267 180097 . - 0 ID=cds-WP_003401010.1;Parent=gene-AL55_RS06565;Dbxref=GenBank:WP_003401010.1;Name=WP_003401010.1;gbkey=CDS;gene=ptbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214667.1;locus_tag=AL55_RS06565;product=tyrosine-protein phosphatase PtbB;protein_id=WP_003401010.1;transl_table=11 NZ_KK316828.1 RefSeq gene 180099 181310 . - . ID=gene-AL55_RS06570;Name=AL55_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06570;old_locus_tag=AL55_00160 NZ_KK316828.1 Protein Homology CDS 180099 181310 . - 0 ID=cds-WP_003401015.1;Parent=gene-AL55_RS06570;Dbxref=GenBank:WP_003401015.1;Name=WP_003401015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214668.1;locus_tag=AL55_RS06570;product=acyl-CoA dehydrogenase;protein_id=WP_003401015.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 181427 181673 . + . ID=gene-AL55_RS25485;Name=AL55_RS25485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25485;partial=true;pseudo=true;start_range=.,181427 NZ_KK316828.1 Protein Homology CDS 181427 181673 . + 0 ID=cds-AL55_RS25485;Parent=gene-AL55_RS25485;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009956636.1;locus_tag=AL55_RS25485;partial=true;product=DUF1348 family protein;pseudo=true;start_range=.,181427;transl_table=11 NZ_KK316828.1 RefSeq gene 181734 182834 . + . ID=gene-AL55_RS06575;Name=pntAa;gbkey=Gene;gene=pntAa;gene_biotype=protein_coding;locus_tag=AL55_RS06575;old_locus_tag=AL55_00161 NZ_KK316828.1 Protein Homology CDS 181734 182834 . + 0 ID=cds-WP_003401026.1;Parent=gene-AL55_RS06575;Dbxref=GenBank:WP_003401026.1;Name=WP_003401026.1;Ontology_term=GO:1902600;gbkey=CDS;gene=pntAa;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214669.1;locus_tag=AL55_RS06575;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_003401026.1;transl_table=11 NZ_KK316828.1 RefSeq gene 182835 183167 . + . ID=gene-AL55_RS06580;Name=pntAb;gbkey=Gene;gene=pntAb;gene_biotype=protein_coding;locus_tag=AL55_RS06580;old_locus_tag=AL55_00162 NZ_KK316828.1 Protein Homology CDS 182835 183167 . + 0 ID=cds-WP_003401030.1;Parent=gene-AL55_RS06580;Dbxref=GenBank:WP_003401030.1;Name=WP_003401030.1;gbkey=CDS;gene=pntAb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214670.1;locus_tag=AL55_RS06580;product=NAD(P) transhydrogenase subunit alpha part 2;protein_id=WP_003401030.1;transl_table=11 NZ_KK316828.1 RefSeq gene 183164 184591 . + . ID=gene-AL55_RS06585;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AL55_RS06585;old_locus_tag=AL55_00163 NZ_KK316828.1 Protein Homology CDS 183164 184591 . + 0 ID=cds-WP_003899835.1;Parent=gene-AL55_RS06585;Dbxref=GenBank:WP_003899835.1;Name=WP_003899835.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214671.1;locus_tag=AL55_RS06585;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta;protein_id=WP_003899835.1;transl_table=11 NZ_KK316828.1 RefSeq gene 184607 184735 . - . ID=gene-AL55_RS06590;Name=AL55_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06590;old_locus_tag=AL55_00164 NZ_KK316828.1 Protein Homology CDS 184607 184735 . - 0 ID=cds-WP_003910049.1;Parent=gene-AL55_RS06590;Dbxref=GenBank:WP_003910049.1;Name=WP_003910049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408797.1;locus_tag=AL55_RS06590;product=hypothetical protein;protein_id=WP_003910049.1;transl_table=11 NZ_KK316828.1 RefSeq gene 184897 185541 . + . ID=gene-AL55_RS06595;Name=AL55_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06595;old_locus_tag=AL55_00165 NZ_KK316828.1 Protein Homology CDS 184897 185541 . + 0 ID=cds-WP_003401044.1;Parent=gene-AL55_RS06595;Dbxref=GenBank:WP_003401044.1;Name=WP_003401044.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214672.1;locus_tag=AL55_RS06595;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401044.1;transl_table=11 NZ_KK316828.1 RefSeq gene 185545 186951 . - . ID=gene-AL55_RS06600;Name=AL55_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06600;old_locus_tag=AL55_00166 NZ_KK316828.1 Protein Homology CDS 185545 186951 . - 0 ID=cds-WP_003401047.1;Parent=gene-AL55_RS06600;Dbxref=GenBank:WP_003401047.1;Name=WP_003401047.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177697.1;locus_tag=AL55_RS06600;product=PE family protein;protein_id=WP_003401047.1;transl_table=11 NZ_KK316828.1 RefSeq gene 187043 188551 . - . ID=gene-AL55_RS06605;Name=AL55_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06605;old_locus_tag=AL55_00167 NZ_KK316828.1 Protein Homology CDS 187043 188551 . - 0 ID=cds-WP_003900817.1;Parent=gene-AL55_RS06605;Dbxref=GenBank:WP_003900817.1;Name=WP_003900817.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177698.1;locus_tag=AL55_RS06605;product=PE family protein;protein_id=WP_003900817.1;transl_table=11 NZ_KK316828.1 RefSeq gene 188719 190068 . + . ID=gene-AL55_RS06610;Name=AL55_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06610;old_locus_tag=AL55_00168 NZ_KK316828.1 Protein Homology CDS 188719 190068 . + 0 ID=cds-WP_003401056.1;Parent=gene-AL55_RS06610;Dbxref=GenBank:WP_003401056.1;Name=WP_003401056.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214675.1;locus_tag=AL55_RS06610;product=FAD-binding oxidoreductase;protein_id=WP_003401056.1;transl_table=11 NZ_KK316828.1 RefSeq gene 190096 191214 . - . ID=gene-AL55_RS06615;Name=AL55_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06615;old_locus_tag=AL55_00169 NZ_KK316828.1 Protein Homology CDS 190096 191214 . - 0 ID=cds-WP_003901814.1;Parent=gene-AL55_RS06615;Dbxref=GenBank:WP_003901814.1;Name=WP_003901814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914562.1;locus_tag=AL55_RS06615;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_003901814.1;transl_table=11 NZ_KK316828.1 RefSeq gene 191229 191684 . + . ID=gene-AL55_RS06620;Name=AL55_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06620;old_locus_tag=AL55_00170 NZ_KK316828.1 Protein Homology CDS 191229 191684 . + 0 ID=cds-WP_003401060.1;Parent=gene-AL55_RS06620;Dbxref=GenBank:WP_003401060.1;Name=WP_003401060.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214677.1;locus_tag=AL55_RS06620;product=acyl-CoA thioesterase;protein_id=WP_003401060.1;transl_table=11 NZ_KK316828.1 RefSeq gene 191783 192223 . + . ID=gene-AL55_RS06625;Name=AL55_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06625;old_locus_tag=AL55_00171 NZ_KK316828.1 Protein Homology CDS 191783 192223 . + 0 ID=cds-WP_003917895.1;Parent=gene-AL55_RS06625;Dbxref=GenBank:WP_003917895.1;Name=WP_003917895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874167.1;locus_tag=AL55_RS06625;product=SRPBCC family protein;protein_id=WP_003917895.1;transl_table=11 NZ_KK316828.1 RefSeq gene 192237 192929 . - . ID=gene-AL55_RS0104185;Name=AL55_RS0104185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104185;old_locus_tag=AL55_00172 NZ_KK316828.1 Protein Homology CDS 192237 192929 . - 0 ID=cds-WP_003401065.1;Parent=gene-AL55_RS0104185;Dbxref=GenBank:WP_003401065.1;Name=WP_003401065.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401065.1;locus_tag=AL55_RS0104185;product=GntR family transcriptional regulator;protein_id=WP_003401065.1;transl_table=11 NZ_KK316828.1 RefSeq gene 193107 194771 . + . ID=gene-AL55_RS06630;Name=fadD5;gbkey=Gene;gene=fadD5;gene_biotype=protein_coding;locus_tag=AL55_RS06630;old_locus_tag=AL55_00173 NZ_KK316828.1 Protein Homology CDS 193107 194771 . + 0 ID=cds-WP_003899837.1;Parent=gene-AL55_RS06630;Dbxref=GenBank:WP_003899837.1;Name=WP_003899837.1;gbkey=CDS;gene=fadD5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214680.1;locus_tag=AL55_RS06630;product=fatty-acid--CoA ligase FadD5;protein_id=WP_003899837.1;transl_table=11 NZ_KK316828.1 RefSeq gene 194975 195772 . + . ID=gene-AL55_RS06635;Name=AL55_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06635;old_locus_tag=AL55_00174 NZ_KK316828.1 Protein Homology CDS 194975 195772 . + 0 ID=cds-WP_003401074.1;Parent=gene-AL55_RS06635;Dbxref=GenBank:WP_003401074.1;Name=WP_003401074.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214681.1;locus_tag=AL55_RS06635;product=MlaE family ABC transporter permease;protein_id=WP_003401074.1;transl_table=11 NZ_KK316828.1 RefSeq gene 195774 196643 . + . ID=gene-AL55_RS06640;Name=AL55_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06640;old_locus_tag=AL55_00175 NZ_KK316828.1 Protein Homology CDS 195774 196643 . + 0 ID=cds-WP_003401077.1;Parent=gene-AL55_RS06640;Dbxref=GenBank:WP_003401077.1;Name=WP_003401077.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214682.1;locus_tag=AL55_RS06640;product=MlaE family ABC transporter permease;protein_id=WP_003401077.1;transl_table=11 NZ_KK316828.1 RefSeq gene 196648 198012 . + . ID=gene-AL55_RS06645;Name=AL55_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06645;old_locus_tag=AL55_00176 NZ_KK316828.1 Protein Homology CDS 196648 198012 . + 0 ID=cds-WP_003401078.1;Parent=gene-AL55_RS06645;Dbxref=GenBank:WP_003401078.1;Name=WP_003401078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177701.1;locus_tag=AL55_RS06645;product=MCE family protein;protein_id=WP_003401078.1;transl_table=11 NZ_KK316828.1 RefSeq gene 198009 199049 . + . ID=gene-AL55_RS06650;Name=AL55_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06650;old_locus_tag=AL55_00177 NZ_KK316828.1 Protein Homology CDS 198009 199049 . + 0 ID=cds-WP_003899839.1;Parent=gene-AL55_RS06650;Dbxref=GenBank:WP_003899839.1;Name=WP_003899839.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214684.1;locus_tag=AL55_RS06650;product=virulence factor Mce family protein;protein_id=WP_003899839.1;transl_table=11 NZ_KK316828.1 RefSeq gene 199046 200593 . + . ID=gene-AL55_RS06655;Name=AL55_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06655;old_locus_tag=AL55_00178 NZ_KK316828.1 Protein Homology CDS 199046 200593 . + 0 ID=cds-WP_003901818.1;Parent=gene-AL55_RS06655;Dbxref=GenBank:WP_003901818.1;Name=WP_003901818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214685.1;locus_tag=AL55_RS06655;product=virulence factor Mce family protein;protein_id=WP_003901818.1;transl_table=11 NZ_KK316828.1 RefSeq gene 200590 202182 . + . ID=gene-AL55_RS06660;Name=AL55_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06660;old_locus_tag=AL55_00179 NZ_KK316828.1 Protein Homology CDS 200590 202182 . + 0 ID=cds-WP_003911067.1;Parent=gene-AL55_RS06660;Dbxref=GenBank:WP_003911067.1;Name=WP_003911067.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214686.1;locus_tag=AL55_RS06660;product=virulence factor Mce family protein;protein_id=WP_003911067.1;transl_table=11 NZ_KK316828.1 RefSeq gene 202179 203351 . + . ID=gene-AL55_RS06665;Name=lprK;gbkey=Gene;gene=lprK;gene_biotype=protein_coding;locus_tag=AL55_RS06665;old_locus_tag=AL55_00180 NZ_KK316828.1 Protein Homology CDS 202179 203351 . + 0 ID=cds-WP_003899841.1;Parent=gene-AL55_RS06665;Dbxref=GenBank:WP_003899841.1;Name=WP_003899841.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=lprK;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214687.1;locus_tag=AL55_RS06665;product=virulence factor Mce family protein;protein_id=WP_003899841.1;transl_table=11 NZ_KK316828.1 RefSeq gene 203345 204892 . + . ID=gene-AL55_RS06670;Name=AL55_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06670;old_locus_tag=AL55_00181 NZ_KK316828.1 Protein Homology CDS 203345 204892 . + 0 ID=cds-WP_003401091.1;Parent=gene-AL55_RS06670;Dbxref=GenBank:WP_003401091.1;Name=WP_003401091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214688.1;locus_tag=AL55_RS06670;product=virulence factor Mce family protein;protein_id=WP_003401091.1;transl_table=11 NZ_KK316828.1 RefSeq gene 204928 205569 . + . ID=gene-AL55_RS06675;Name=AL55_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06675;old_locus_tag=AL55_00182 NZ_KK316828.1 Protein Homology CDS 204928 205569 . + 0 ID=cds-WP_003401093.1;Parent=gene-AL55_RS06675;Dbxref=GenBank:WP_003401093.1;Name=WP_003401093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214689.3;locus_tag=AL55_RS06675;product=membrane protein;protein_id=WP_003401093.1;transl_table=11 NZ_KK316828.1 RefSeq gene 205566 206534 . + . ID=gene-AL55_RS06680;Name=AL55_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06680;old_locus_tag=AL55_00183 NZ_KK316828.1 Protein Homology CDS 205566 206534 . + 0 ID=cds-WP_003899843.1;Parent=gene-AL55_RS06680;Dbxref=GenBank:WP_003899843.1;Name=WP_003899843.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214690.1;locus_tag=AL55_RS06680;product=RDD family protein;protein_id=WP_003899843.1;transl_table=11 NZ_KK316828.1 RefSeq gene 206531 207085 . + . ID=gene-AL55_RS06685;Name=AL55_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06685;old_locus_tag=AL55_00184 NZ_KK316828.1 Protein Homology CDS 206531 207085 . + 0 ID=cds-WP_003401099.1;Parent=gene-AL55_RS06685;Dbxref=GenBank:WP_003401099.1;Name=WP_003401099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401099.1;locus_tag=AL55_RS06685;product=mce1 operon protein;protein_id=WP_003401099.1;transl_table=11 NZ_KK316828.1 RefSeq gene 207052 207786 . + . ID=gene-AL55_RS06690;Name=AL55_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06690;old_locus_tag=AL55_00185 NZ_KK316828.1 Protein Homology CDS 207052 207786 . + 0 ID=cds-WP_003899844.1;Parent=gene-AL55_RS06690;Dbxref=GenBank:WP_003899844.1;Name=WP_003899844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214692.1;locus_tag=AL55_RS06690;product=Mce associated membrane protein;protein_id=WP_003899844.1;transl_table=11 NZ_KK316828.1 RefSeq gene 207817 208926 . - . ID=gene-AL55_RS06695;Name=lprO;gbkey=Gene;gene=lprO;gene_biotype=protein_coding;locus_tag=AL55_RS06695;old_locus_tag=AL55_00186 NZ_KK316828.1 Protein Homology CDS 207817 208926 . - 0 ID=cds-WP_003899845.1;Parent=gene-AL55_RS06695;Dbxref=GenBank:WP_003899845.1;Name=WP_003899845.1;gbkey=CDS;gene=lprO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214693.1;locus_tag=AL55_RS06695;product=phosphodiester glycosidase family protein;protein_id=WP_003899845.1;transl_table=11 NZ_KK316828.1 RefSeq gene 209006 210364 . - . ID=gene-AL55_RS06700;Name=AL55_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06700;old_locus_tag=AL55_00187 NZ_KK316828.1 Protein Homology CDS 209006 210364 . - 0 ID=cds-WP_003899846.1;Parent=gene-AL55_RS06700;Dbxref=GenBank:WP_003899846.1;Name=WP_003899846.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214694.1;locus_tag=AL55_RS06700;product=YhgE/Pip domain-containing protein;protein_id=WP_003899846.1;transl_table=11 NZ_KK316828.1 RefSeq gene 210391 211125 . - . ID=gene-AL55_RS06705;Name=AL55_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06705;old_locus_tag=AL55_00188 NZ_KK316828.1 Protein Homology CDS 210391 211125 . - 0 ID=cds-WP_003401107.1;Parent=gene-AL55_RS06705;Dbxref=GenBank:WP_003401107.1;Name=WP_003401107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214695.1;locus_tag=AL55_RS06705;product=pirin family protein;protein_id=WP_003401107.1;transl_table=11 NZ_KK316828.1 RefSeq gene 211142 212254 . - . ID=gene-AL55_RS06710;Name=sigG;gbkey=Gene;gene=sigG;gene_biotype=protein_coding;locus_tag=AL55_RS06710;old_locus_tag=AL55_00189 NZ_KK316828.1 Protein Homology CDS 211142 212254 . - 0 ID=cds-WP_003902615.1;Parent=gene-AL55_RS06710;Dbxref=GenBank:WP_003902615.1;Name=WP_003902615.1;gbkey=CDS;gene=sigG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214696.1;locus_tag=AL55_RS06710;product=sigma-70 family RNA polymerase sigma factor SigG;protein_id=WP_003902615.1;transl_table=11 NZ_KK316828.1 RefSeq gene 212202 213041 . + . ID=gene-AL55_RS06715;Name=AL55_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06715;old_locus_tag=AL55_00190 NZ_KK316828.1 Protein Homology CDS 212202 213041 . + 0 ID=cds-WP_003401112.1;Parent=gene-AL55_RS06715;Dbxref=GenBank:WP_003401112.1;Name=WP_003401112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214697.2;locus_tag=AL55_RS06715;product=monoacylglycerol lipase;protein_id=WP_003401112.1;transl_table=11 NZ_KK316828.1 RefSeq gene 213083 213832 . + . ID=gene-AL55_RS06720;Name=AL55_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06720;old_locus_tag=AL55_00191 NZ_KK316828.1 Protein Homology CDS 213083 213832 . + 0 ID=cds-WP_003401116.1;Parent=gene-AL55_RS06720;Dbxref=GenBank:WP_003401116.1;Name=WP_003401116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214698.1;locus_tag=AL55_RS06720;product=DUF2786 domain-containing protein;protein_id=WP_003401116.1;transl_table=11 NZ_KK316828.1 RefSeq gene 213829 214338 . + . ID=gene-AL55_RS06725;Name=AL55_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06725;old_locus_tag=AL55_00192 NZ_KK316828.1 Protein Homology CDS 213829 214338 . + 0 ID=cds-WP_003911068.1;Parent=gene-AL55_RS06725;Dbxref=GenBank:WP_003911068.1;Name=WP_003911068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214699.1;locus_tag=AL55_RS06725;product=TIGR04338 family metallohydrolase;protein_id=WP_003911068.1;transl_table=11 NZ_KK316828.1 RefSeq gene 214383 216458 . + . ID=gene-AL55_RS06730;Name=bglS;gbkey=Gene;gene=bglS;gene_biotype=protein_coding;locus_tag=AL55_RS06730;old_locus_tag=AL55_00193 NZ_KK316828.1 Protein Homology CDS 214383 216458 . + 0 ID=cds-WP_003401122.1;Parent=gene-AL55_RS06730;Dbxref=GenBank:WP_003401122.1;Name=WP_003401122.1;Ontology_term=GO:0030245,GO:0008422;gbkey=CDS;gene=bglS;go_function=beta-glucosidase activity|0008422||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012392408.1;locus_tag=AL55_RS06730;product=beta-glucosidase;protein_id=WP_003401122.1;transl_table=11 NZ_KK316828.1 RefSeq gene 216504 216665 . - . ID=gene-AL55_RS06735;Name=mymT;gbkey=Gene;gene=mymT;gene_biotype=protein_coding;locus_tag=AL55_RS06735;old_locus_tag=AL55_00194 NZ_KK316828.1 Protein Homology CDS 216504 216665 . - 0 ID=cds-WP_010886068.1;Parent=gene-AL55_RS06735;Dbxref=GenBank:WP_010886068.1;Name=WP_010886068.1;gbkey=CDS;gene=mymT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837046.2;locus_tag=AL55_RS06735;product=copper-binding metallothionein MymT;protein_id=WP_010886068.1;transl_table=11 NZ_KK316828.1 RefSeq gene 216819 217481 . + . ID=gene-AL55_RS06740;Name=AL55_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06740;old_locus_tag=AL55_00195 NZ_KK316828.1 Protein Homology CDS 216819 217481 . + 0 ID=cds-WP_003401129.1;Parent=gene-AL55_RS06740;Dbxref=GenBank:WP_003401129.1;Name=WP_003401129.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214701.1;locus_tag=AL55_RS06740;product=O-methyltransferase;protein_id=WP_003401129.1;transl_table=11 NZ_KK316828.1 RefSeq gene 217600 218031 . + . ID=gene-AL55_RS06745;Name=AL55_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06745;old_locus_tag=AL55_00196 NZ_KK316828.1 Protein Homology CDS 217600 218031 . + 0 ID=cds-WP_003401141.1;Parent=gene-AL55_RS06745;Dbxref=GenBank:WP_003401141.1;Name=WP_003401141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214702.1;locus_tag=AL55_RS06745;product=SPW repeat protein;protein_id=WP_003401141.1;transl_table=11 NZ_KK316828.1 RefSeq gene 218110 219837 . - . ID=gene-AL55_RS06750;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=AL55_RS06750;old_locus_tag=AL55_00197 NZ_KK316828.1 Protein Homology CDS 218110 219837 . - 0 ID=cds-WP_003900824.1;Parent=gene-AL55_RS06750;Dbxref=GenBank:WP_003900824.1;Name=WP_003900824.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214703.1;locus_tag=AL55_RS06750;product=dihydroxy-acid dehydratase;protein_id=WP_003900824.1;transl_table=11 NZ_KK316828.1 RefSeq gene 219985 220275 . + . ID=gene-AL55_RS06755;Name=AL55_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06755;old_locus_tag=AL55_00198 NZ_KK316828.1 Protein Homology CDS 219985 220275 . + 0 ID=cds-WP_003401147.1;Parent=gene-AL55_RS06755;Dbxref=GenBank:WP_003401147.1;Name=WP_003401147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214704.1;locus_tag=AL55_RS06755;product=copper-sensing transcriptional repressor RicR;protein_id=WP_003401147.1;transl_table=11 NZ_KK316828.1 RefSeq gene 220403 221644 . + . ID=gene-AL55_RS06760;Name=AL55_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06760;old_locus_tag=AL55_00199 NZ_KK316828.1 Protein Homology CDS 220403 221644 . + 0 ID=cds-WP_003902617.1;Parent=gene-AL55_RS06760;Dbxref=GenBank:WP_003902617.1;Name=WP_003902617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214705.1;locus_tag=AL55_RS06760;product=Rv0191 family MFS efflux transporter;protein_id=WP_003902617.1;transl_table=11 NZ_KK316828.1 RefSeq gene 221678 222778 . + . ID=gene-AL55_RS06765;Name=ldtMt4;gbkey=Gene;gene=ldtMt4;gene_biotype=protein_coding;locus_tag=AL55_RS06765;old_locus_tag=AL55_00200 NZ_KK316828.1 Protein Homology CDS 221678 222778 . + 0 ID=cds-WP_003899849.1;Parent=gene-AL55_RS06765;Dbxref=GenBank:WP_003899849.1;Name=WP_003899849.1;gbkey=CDS;gene=ldtMt4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899849.1;locus_tag=AL55_RS06765;product=L%2CD-transpeptidase LdtMt4;protein_id=WP_003899849.1;transl_table=11 NZ_KK316828.1 RefSeq gene 222838 224685 . - . ID=gene-AL55_RS06770;Name=AL55_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06770;old_locus_tag=AL55_00202 NZ_KK316828.1 Protein Homology CDS 222838 224685 . - 0 ID=cds-WP_003899850.1;Parent=gene-AL55_RS06770;Dbxref=GenBank:WP_003899850.1;Name=WP_003899850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214707.1;locus_tag=AL55_RS06770;product=hypothetical protein;protein_id=WP_003899850.1;transl_table=11 NZ_KK316828.1 RefSeq gene 224992 228576 . + . ID=gene-AL55_RS06775;Name=AL55_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06775;old_locus_tag=AL55_00203 NZ_KK316828.1 Protein Homology CDS 224992 228576 . + 0 ID=cds-WP_003902618.1;Parent=gene-AL55_RS06775;Dbxref=GenBank:WP_003902618.1;Name=WP_003902618.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214708.1;locus_tag=AL55_RS06775;product=ABC transporter ATP-binding protein;protein_id=WP_003902618.1;transl_table=11 NZ_KK316828.1 RefSeq gene 229014 229649 . + . ID=gene-AL55_RS06780;Name=AL55_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06780;old_locus_tag=AL55_00204 NZ_KK316828.1 Protein Homology CDS 229014 229649 . + 0 ID=cds-WP_003901824.1;Parent=gene-AL55_RS06780;Dbxref=GenBank:WP_003901824.1;Name=WP_003901824.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214709.1;locus_tag=AL55_RS06780;product=response regulator transcription factor;protein_id=WP_003901824.1;transl_table=11 NZ_KK316828.1 RefSeq gene 229762 230346 . + . ID=gene-AL55_RS06785;Name=AL55_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06785;old_locus_tag=AL55_00205 NZ_KK316828.1 Protein Homology CDS 229762 230346 . + 0 ID=cds-WP_003401168.1;Parent=gene-AL55_RS06785;Dbxref=GenBank:WP_003401168.1;Name=WP_003401168.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214710.1;locus_tag=AL55_RS06785;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401168.1;transl_table=11 NZ_KK316828.1 RefSeq gene 230346 232592 . + . ID=gene-AL55_RS06790;Name=AL55_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06790;old_locus_tag=AL55_00206 NZ_KK316828.1 Protein Homology CDS 230346 232592 . + 0 ID=cds-WP_003913548.1;Parent=gene-AL55_RS06790;Dbxref=GenBank:WP_003913548.1;Name=WP_003913548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302437.1;locus_tag=AL55_RS06790;product=molybdopterin oxidoreductase family protein;protein_id=WP_003913548.1;transl_table=11 NZ_KK316828.1 RefSeq gene 232633 234624 . - . ID=gene-AL55_RS06795;Name=zmp1;gbkey=Gene;gene=zmp1;gene_biotype=protein_coding;locus_tag=AL55_RS06795;old_locus_tag=AL55_00207 NZ_KK316828.1 Protein Homology CDS 232633 234624 . - 0 ID=cds-WP_003401172.1;Parent=gene-AL55_RS06795;Dbxref=GenBank:WP_003401172.1;Name=WP_003401172.1;gbkey=CDS;gene=zmp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214712.1;locus_tag=AL55_RS06795;product=zinc metalloprotease Zmp1;protein_id=WP_003401172.1;transl_table=11 NZ_KK316828.1 RefSeq gene 234667 235326 . + . ID=gene-AL55_RS06800;Name=AL55_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06800;old_locus_tag=AL55_00208 NZ_KK316828.1 Protein Homology CDS 234667 235326 . + 0 ID=cds-WP_003401181.1;Parent=gene-AL55_RS06800;Dbxref=GenBank:WP_003401181.1;Name=WP_003401181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214713.1;locus_tag=AL55_RS06800;product=hypothetical protein;protein_id=WP_003401181.1;transl_table=11 NZ_KK316828.1 RefSeq gene 235323 236012 . + . ID=gene-AL55_RS06805;Name=AL55_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06805;old_locus_tag=AL55_00209 NZ_KK316828.1 Protein Homology CDS 235323 236012 . + 0 ID=cds-WP_003401184.1;Parent=gene-AL55_RS06805;Dbxref=GenBank:WP_003401184.1;Name=WP_003401184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214714.1;locus_tag=AL55_RS06805;product=hypothetical protein;protein_id=WP_003401184.1;transl_table=11 NZ_KK316828.1 RefSeq gene 236009 236512 . - . ID=gene-AL55_RS06810;Name=AL55_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06810;old_locus_tag=AL55_00210 NZ_KK316828.1 Protein Homology CDS 236009 236512 . - 0 ID=cds-WP_003401187.1;Parent=gene-AL55_RS06810;Dbxref=GenBank:WP_003401187.1;Name=WP_003401187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214715.1;locus_tag=AL55_RS06810;product=hypothetical protein;protein_id=WP_003401187.1;transl_table=11 NZ_KK316828.1 RefSeq gene 236509 239409 . - . ID=gene-AL55_RS06815;Name=mmpL11;gbkey=Gene;gene=mmpL11;gene_biotype=protein_coding;locus_tag=AL55_RS06815;old_locus_tag=AL55_00211 NZ_KK316828.1 Protein Homology CDS 236509 239409 . - 0 ID=cds-WP_003401190.1;Parent=gene-AL55_RS06815;Dbxref=GenBank:WP_003401190.1;Name=WP_003401190.1;gbkey=CDS;gene=mmpL11;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214716.1;locus_tag=AL55_RS06815;product=RND transporter MmpL11;protein_id=WP_003401190.1;transl_table=11 NZ_KK316828.1 RefSeq gene 239631 240041 . + . ID=gene-AL55_RS06820;Name=AL55_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06820;old_locus_tag=AL55_00212 NZ_KK316828.1 Protein Homology CDS 239631 240041 . + 0 ID=cds-WP_003401194.1;Parent=gene-AL55_RS06820;Dbxref=GenBank:WP_003401194.1;Name=WP_003401194.1;Ontology_term=GO:0015886,GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214717.1;locus_tag=AL55_RS06820;product=hemophore;protein_id=WP_003401194.1;transl_table=11 NZ_KK316828.1 RefSeq gene 240093 241331 . - . ID=gene-AL55_RS06825;Name=AL55_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06825;old_locus_tag=AL55_00213 NZ_KK316828.1 Protein Homology CDS 240093 241331 . - 0 ID=cds-WP_031695331.1;Parent=gene-AL55_RS06825;Dbxref=GenBank:WP_031695331.1;Name=WP_031695331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214718.2;locus_tag=AL55_RS06825;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_031695331.1;transl_table=11 NZ_KK316828.1 RefSeq gene 241501 242604 . + . ID=gene-AL55_RS06830;Name=AL55_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06830;old_locus_tag=AL55_00214 NZ_KK316828.1 Protein Homology CDS 241501 242604 . + 0 ID=cds-WP_003899854.1;Parent=gene-AL55_RS06830;Dbxref=GenBank:WP_003899854.1;Name=WP_003899854.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214719.1;locus_tag=AL55_RS06830;product=AI-2E family transporter;protein_id=WP_003899854.1;transl_table=11 NZ_KK316828.1 RefSeq gene 242601 245435 . - . ID=gene-AL55_RS06835;Name=mmpL3;gbkey=Gene;gene=mmpL3;gene_biotype=protein_coding;locus_tag=AL55_RS06835;old_locus_tag=AL55_00215 NZ_KK316828.1 Protein Homology CDS 242601 245435 . - 0 ID=cds-WP_003899855.1;Parent=gene-AL55_RS06835;Dbxref=GenBank:WP_003899855.1;Name=WP_003899855.1;gbkey=CDS;gene=mmpL3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214720.1;locus_tag=AL55_RS06835;product=trehalose monomycolate RND transporter MmpL3;protein_id=WP_003899855.1;transl_table=11 NZ_KK316828.1 RefSeq gene 245501 246229 . - . ID=gene-AL55_RS06840;Name=AL55_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06840;old_locus_tag=AL55_00216 NZ_KK316828.1 Protein Homology CDS 245501 246229 . - 0 ID=cds-WP_003401202.1;Parent=gene-AL55_RS06840;Dbxref=GenBank:WP_003401202.1;Name=WP_003401202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214721.1;locus_tag=AL55_RS06840;product=NYN domain-containing protein;protein_id=WP_003401202.1;transl_table=11 NZ_KK316828.1 RefSeq gene 246232 247023 . - . ID=gene-AL55_RS06845;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=AL55_RS06845;old_locus_tag=AL55_00217 NZ_KK316828.1 Protein Homology CDS 246232 247023 . - 0 ID=cds-WP_003401204.1;Parent=gene-AL55_RS06845;Dbxref=GenBank:WP_003401204.1;Name=WP_003401204.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214722.1;locus_tag=AL55_RS06845;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_003401204.1;transl_table=11 NZ_KK316828.1 RefSeq gene 247155 248240 . + . ID=gene-AL55_RS06850;Name=AL55_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06850;old_locus_tag=AL55_00218 NZ_KK316828.1 Protein Homology CDS 247155 248240 . + 0 ID=cds-WP_003401206.1;Parent=gene-AL55_RS06850;Dbxref=GenBank:WP_003401206.1;Name=WP_003401206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214723.1;locus_tag=AL55_RS06850;product=hypothetical protein;protein_id=WP_003401206.1;transl_table=11 NZ_KK316828.1 RefSeq gene 248237 249715 . + . ID=gene-AL55_RS06855;Name=AL55_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06855;old_locus_tag=AL55_00219 NZ_KK316828.1 Protein Homology CDS 248237 249715 . + 0 ID=cds-WP_003401208.1;Parent=gene-AL55_RS06855;Dbxref=GenBank:WP_003401208.1;Name=WP_003401208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214724.1;locus_tag=AL55_RS06855;product=hypothetical protein;protein_id=WP_003401208.1;transl_table=11 NZ_KK316828.1 RefSeq gene 249899 251719 . + . ID=gene-AL55_RS06860;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=AL55_RS06860;old_locus_tag=AL55_00220 NZ_KK316828.1 Protein Homology CDS 249899 251719 . + 0 ID=cds-WP_003401212.1;Parent=gene-AL55_RS06860;Dbxref=GenBank:WP_003401212.1;Name=WP_003401212.1;Ontology_term=GO:0006094,GO:0004611,GO:0005525,GO:0017076;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase activity|0004611||IEA,GTP binding|0005525||IEA,purine nucleotide binding|0017076||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214725.1;locus_tag=AL55_RS06860;product=phosphoenolpyruvate carboxykinase (GTP);protein_id=WP_003401212.1;transl_table=11 NZ_KK316828.1 RefSeq gene 251786 252757 . - . ID=gene-AL55_RS06865;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=AL55_RS06865;old_locus_tag=AL55_00221 NZ_KK316828.1 Protein Homology CDS 251786 252757 . - 0 ID=cds-WP_003401213.1;Parent=gene-AL55_RS06865;Dbxref=GenBank:WP_003401213.1;Name=WP_003401213.1;Ontology_term=GO:0009435,GO:0000309;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214726.1;locus_tag=AL55_RS06865;product=nicotinamide-nucleotide adenylyltransferase;protein_id=WP_003401213.1;transl_table=11 NZ_KK316828.1 RefSeq gene 252754 254187 . - . ID=gene-AL55_RS06870;Name=AL55_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06870;old_locus_tag=AL55_00222 NZ_KK316828.1 Protein Homology CDS 252754 254187 . - 0 ID=cds-WP_003911129.1;Parent=gene-AL55_RS06870;Dbxref=GenBank:WP_003911129.1;Name=WP_003911129.1;Ontology_term=GO:0003824,GO:0031419,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,cobalamin binding|0031419||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911129.1;locus_tag=AL55_RS06870;product=B12-binding domain-containing radical SAM protein;protein_id=WP_003911129.1;transl_table=11 NZ_KK316828.1 RefSeq gene 254277 255794 . + . ID=gene-AL55_RS06875;Name=fadD4;gbkey=Gene;gene=fadD4;gene_biotype=protein_coding;locus_tag=AL55_RS06875;old_locus_tag=AL55_00223 NZ_KK316828.1 Protein Homology CDS 254277 255794 . + 0 ID=cds-WP_003911098.1;Parent=gene-AL55_RS06875;Dbxref=GenBank:WP_003911098.1;Name=WP_003911098.1;gbkey=CDS;gene=fadD4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009979674.1;locus_tag=AL55_RS06875;product=fatty-acid--CoA ligase FadD4;protein_id=WP_003911098.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 255836 256943 . - . ID=gene-AL55_RS06880;Name=AL55_RS06880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS06880;old_locus_tag=AL55_00224;pseudo=true NZ_KK316828.1 Protein Homology CDS 255836 256943 . - 0 ID=cds-AL55_RS06880;Parent=gene-AL55_RS06880;Note=frameshifted;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016705807.1;locus_tag=AL55_RS06880;product=acyl-CoA dehydrogenase family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 257030 258043 . + . ID=gene-AL55_RS06885;Name=AL55_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06885;old_locus_tag=AL55_00225 NZ_KK316828.1 Protein Homology CDS 257030 258043 . + 0 ID=cds-WP_003401224.1;Parent=gene-AL55_RS06885;Dbxref=GenBank:WP_003401224.1;Name=WP_003401224.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214730.1;locus_tag=AL55_RS06885;product=MaoC family dehydratase;protein_id=WP_003401224.1;transl_table=11 NZ_KK316828.1 RefSeq gene 258040 258948 . - . ID=gene-AL55_RS06890;Name=lipW;gbkey=Gene;gene=lipW;gene_biotype=protein_coding;locus_tag=AL55_RS06890;old_locus_tag=AL55_00226 NZ_KK316828.1 Protein Homology CDS 258040 258948 . - 0 ID=cds-WP_003900831.1;Parent=gene-AL55_RS06890;Dbxref=GenBank:WP_003900831.1;Name=WP_003900831.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipW;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214731.1;locus_tag=AL55_RS06890;product=alpha/beta hydrolase;protein_id=WP_003900831.1;transl_table=11 NZ_KK316828.1 RefSeq gene 259041 260369 . + . ID=gene-AL55_RS06895;Name=AL55_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06895;old_locus_tag=AL55_00227 NZ_KK316828.1 Protein Homology CDS 259041 260369 . + 0 ID=cds-WP_003901829.1;Parent=gene-AL55_RS06895;Dbxref=GenBank:WP_003901829.1;Name=WP_003901829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214732.1;locus_tag=AL55_RS06895;product=molybdopterin-dependent oxidoreductase;protein_id=WP_003901829.1;transl_table=11 NZ_KK316828.1 RefSeq gene 260371 260919 . + . ID=gene-AL55_RS06900;Name=AL55_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06900;old_locus_tag=AL55_00228 NZ_KK316828.1 Protein Homology CDS 260371 260919 . + 0 ID=cds-WP_003401230.1;Parent=gene-AL55_RS06900;Dbxref=GenBank:WP_003401230.1;Name=WP_003401230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214733.1;locus_tag=AL55_RS06900;product=hypothetical protein;protein_id=WP_003401230.1;transl_table=11 NZ_KK316828.1 RefSeq gene 260929 262140 . + . ID=gene-AL55_RS06905;Name=lipC;gbkey=Gene;gene=lipC;gene_biotype=protein_coding;locus_tag=AL55_RS06905;old_locus_tag=AL55_00229 NZ_KK316828.1 Protein Homology CDS 260929 262140 . + 0 ID=cds-WP_003899863.1;Parent=gene-AL55_RS06905;Dbxref=GenBank:WP_003899863.1;Name=WP_003899863.1;gbkey=CDS;gene=lipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214734.1;locus_tag=AL55_RS06905;product=esterase LipC;protein_id=WP_003899863.1;transl_table=11 NZ_KK316828.1 RefSeq gene 262184 263593 . + . ID=gene-AL55_RS06910;Name=AL55_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06910;old_locus_tag=AL55_00230 NZ_KK316828.1 Protein Homology CDS 262184 263593 . + 0 ID=cds-WP_003901830.1;Parent=gene-AL55_RS06910;Dbxref=GenBank:WP_003901830.1;Name=WP_003901830.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214735.1;locus_tag=AL55_RS06910;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003901830.1;transl_table=11 NZ_KK316828.1 RefSeq gene 263624 264412 . + . ID=gene-AL55_RS06915;Name=AL55_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06915;old_locus_tag=AL55_00231 NZ_KK316828.1 Protein Homology CDS 263624 264412 . + 0 ID=cds-WP_003899864.1;Parent=gene-AL55_RS06915;Dbxref=GenBank:WP_003899864.1;Name=WP_003899864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214736.1;locus_tag=AL55_RS06915;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003899864.1;transl_table=11 NZ_KK316828.1 RefSeq gene 264418 265881 . - . ID=gene-AL55_RS06920;Name=AL55_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06920;old_locus_tag=AL55_00232 NZ_KK316828.1 Protein Homology CDS 264418 265881 . - 0 ID=cds-WP_003902624.1;Parent=gene-AL55_RS06920;Dbxref=GenBank:WP_003902624.1;Name=WP_003902624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214737.1;locus_tag=AL55_RS06920;product=aldehyde dehydrogenase;protein_id=WP_003902624.1;transl_table=11 NZ_KK316828.1 RefSeq gene 265980 266744 . - . ID=gene-AL55_RS06925;Name=AL55_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06925;old_locus_tag=AL55_00233 NZ_KK316828.1 Protein Homology CDS 265980 266744 . - 0 ID=cds-WP_003401240.1;Parent=gene-AL55_RS06925;Dbxref=GenBank:WP_003401240.1;Name=WP_003401240.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214738.1;locus_tag=AL55_RS06925;product=class I SAM-dependent methyltransferase;protein_id=WP_003401240.1;transl_table=11 NZ_KK316828.1 RefSeq gene 266780 267934 . + . ID=gene-AL55_RS06930;Name=AL55_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06930;old_locus_tag=AL55_00234 NZ_KK316828.1 Protein Homology CDS 266780 267934 . + 0 ID=cds-WP_003401246.1;Parent=gene-AL55_RS06930;Dbxref=GenBank:WP_003401246.1;Name=WP_003401246.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214739.1;locus_tag=AL55_RS06930;product=glycosyltransferase family 4 protein;protein_id=WP_003401246.1;transl_table=11 NZ_KK316828.1 RefSeq gene 267951 269681 . - . ID=gene-AL55_RS06935;Name=AL55_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06935;old_locus_tag=AL55_00235 NZ_KK316828.1 Protein Homology CDS 267951 269681 . - 0 ID=cds-WP_003902626.1;Parent=gene-AL55_RS06935;Dbxref=GenBank:WP_003902626.1;Name=WP_003902626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214740.1;locus_tag=AL55_RS06935;product=MmpA family trehalose lipid delivery protein;protein_id=WP_003902626.1;transl_table=11 NZ_KK316828.1 RefSeq gene 269691 270971 . - . ID=gene-AL55_RS06940;Name=AL55_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06940;old_locus_tag=AL55_00236 NZ_KK316828.1 Protein Homology CDS 269691 270971 . - 0 ID=cds-WP_016719572.1;Parent=gene-AL55_RS06940;Dbxref=GenBank:WP_016719572.1;Name=WP_016719572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019284112.1;locus_tag=AL55_RS06940;product=cell envelope lipid trafficking protein PgfA;protein_id=WP_016719572.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 270973 271072 . - . ID=gene-AL55_RS28145;Name=AL55_RS28145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28145;partial=true;pseudo=true;start_range=.,270973 NZ_KK316828.1 Protein Homology CDS 270973 271072 . - 0 ID=cds-AL55_RS28145;Parent=gene-AL55_RS28145;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=AL55_RS28145;partial=true;product=hypothetical protein;pseudo=true;start_range=.,270973;transl_table=11 NZ_KK316828.1 RefSeq gene 271172 272395 . + . ID=gene-AL55_RS06945;Name=AL55_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06945;old_locus_tag=AL55_00237 NZ_KK316828.1 Protein Homology CDS 271172 272395 . + 0 ID=cds-WP_003401260.1;Parent=gene-AL55_RS06945;Dbxref=GenBank:WP_003401260.1;Name=WP_003401260.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214742.1;locus_tag=AL55_RS06945;product=acyltransferase family protein;protein_id=WP_003401260.1;transl_table=11 NZ_KK316828.1 RefSeq gene 272423 272836 . - . ID=gene-AL55_RS06950;Name=AL55_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06950;old_locus_tag=AL55_00238 NZ_KK316828.1 Protein Homology CDS 272423 272836 . - 0 ID=cds-WP_003911071.1;Parent=gene-AL55_RS06950;Dbxref=GenBank:WP_003911071.1;Name=WP_003911071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214743.2;locus_tag=AL55_RS06950;product=PIN domain nuclease;protein_id=WP_003911071.1;transl_table=11 NZ_KK316828.1 RefSeq gene 272827 273021 . - . ID=gene-AL55_RS06955;Name=AL55_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06955;old_locus_tag=AL55_00239 NZ_KK316828.1 Protein Homology CDS 272827 273021 . - 0 ID=cds-WP_003911072.1;Parent=gene-AL55_RS06955;Dbxref=GenBank:WP_003911072.1;Name=WP_003911072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911072.1;locus_tag=AL55_RS06955;product=hypothetical protein;protein_id=WP_003911072.1;transl_table=11 NZ_KK316828.1 RefSeq gene 273100 274080 . - . ID=gene-AL55_RS06960;Name=php;gbkey=Gene;gene=php;gene_biotype=protein_coding;locus_tag=AL55_RS06960;old_locus_tag=AL55_00240 NZ_KK316828.1 Protein Homology CDS 273100 274080 . - 0 ID=cds-WP_003900835.1;Parent=gene-AL55_RS06960;Dbxref=GenBank:WP_003900835.1;Name=WP_003900835.1;gbkey=CDS;gene=php;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214744.1;locus_tag=AL55_RS06960;product=phosphotriesterase-related protein;protein_id=WP_003900835.1;transl_table=11 NZ_KK316828.1 RefSeq gene 274175 275881 . + . ID=gene-AL55_RS06965;Name=AL55_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06965;old_locus_tag=AL55_00241 NZ_KK316828.1 Protein Homology CDS 274175 275881 . + 0 ID=cds-WP_003401265.1;Parent=gene-AL55_RS06965;Dbxref=GenBank:WP_003401265.1;Name=WP_003401265.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214745.1;locus_tag=AL55_RS06965;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003401265.1;transl_table=11 NZ_KK316828.1 RefSeq gene 276016 276705 . + . ID=gene-AL55_RS06970;Name=AL55_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06970;old_locus_tag=AL55_00242 NZ_KK316828.1 Protein Homology CDS 276016 276705 . + 0 ID=cds-WP_003401268.1;Parent=gene-AL55_RS06970;Dbxref=GenBank:WP_003401268.1;Name=WP_003401268.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214746.1;locus_tag=AL55_RS06970;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401268.1;transl_table=11 NZ_KK316828.1 RefSeq gene 276702 277646 . + . ID=gene-AL55_RS06975;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AL55_RS06975;old_locus_tag=AL55_00243 NZ_KK316828.1 Protein Homology CDS 276702 277646 . + 0 ID=cds-WP_003401270.1;Parent=gene-AL55_RS06975;Dbxref=GenBank:WP_003401270.1;Name=WP_003401270.1;gbkey=CDS;gene=nrdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214747.1;locus_tag=AL55_RS06975;product=R2-like ligand-binding oxidase;protein_id=WP_003401270.1;transl_table=11 NZ_KK316828.1 RefSeq gene 277722 279095 . - . ID=gene-AL55_RS06980;Name=AL55_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06980;old_locus_tag=AL55_00244 NZ_KK316828.1 Protein Homology CDS 277722 279095 . - 0 ID=cds-WP_003912534.1;Parent=gene-AL55_RS06980;Dbxref=GenBank:WP_003912534.1;Name=WP_003912534.1;Ontology_term=GO:0004030;gbkey=CDS;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908967.1;locus_tag=AL55_RS06980;product=NADP-dependent succinic semialdehyde dehydrogenase;protein_id=WP_003912534.1;transl_table=11 NZ_KK316828.1 RefSeq gene 279283 280731 . - . ID=gene-AL55_RS06985;Name=AL55_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06985;old_locus_tag=AL55_00245 NZ_KK316828.1 Protein Homology CDS 279283 280731 . - 0 ID=cds-WP_003401279.1;Parent=gene-AL55_RS06985;Dbxref=GenBank:WP_003401279.1;Name=WP_003401279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214749.1;locus_tag=AL55_RS06985;product=lipase maturation factor family protein;protein_id=WP_003401279.1;transl_table=11 NZ_KK316828.1 RefSeq gene 280766 284968 . - . ID=gene-AL55_RS06990;Name=aftD;gbkey=Gene;gene=aftD;gene_biotype=protein_coding;locus_tag=AL55_RS06990;old_locus_tag=AL55_00246 NZ_KK316828.1 Protein Homology CDS 280766 284968 . - 0 ID=cds-WP_003911073.1;Parent=gene-AL55_RS06990;Dbxref=GenBank:WP_003911073.1;Name=WP_003911073.1;Ontology_term=GO:0016740;gbkey=CDS;gene=aftD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214750.1;locus_tag=AL55_RS06990;product=DUF3367 domain-containing protein;protein_id=WP_003911073.1;transl_table=11 NZ_KK316828.1 RefSeq gene 285015 285188 . - . ID=gene-AL55_RS06995;Name=AL55_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS06995;old_locus_tag=AL55_00247 NZ_KK316828.1 Protein Homology CDS 285015 285188 . - 0 ID=cds-WP_003401289.1;Parent=gene-AL55_RS06995;Dbxref=GenBank:WP_003401289.1;Name=WP_003401289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177619.1;locus_tag=AL55_RS06995;product=DUF2613 domain-containing protein;protein_id=WP_003401289.1;transl_table=11 NZ_KK316828.1 RefSeq gene 285303 286469 . + . ID=gene-AL55_RS07000;Name=lpqI;gbkey=Gene;gene=lpqI;gene_biotype=protein_coding;locus_tag=AL55_RS07000;old_locus_tag=AL55_00248 NZ_KK316828.1 Protein Homology CDS 285303 286469 . + 0 ID=cds-WP_003401295.1;Parent=gene-AL55_RS07000;Dbxref=GenBank:WP_003401295.1;Name=WP_003401295.1;gbkey=CDS;gene=lpqI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177702.1;locus_tag=AL55_RS07000;product=beta-N-acetylhexosaminidase;protein_id=WP_003401295.1;transl_table=11 NZ_KK316828.1 RefSeq gene 286545 287159 . + . ID=gene-AL55_RS07005;Name=AL55_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07005;old_locus_tag=AL55_00249 NZ_KK316828.1 Protein Homology CDS 286545 287159 . + 0 ID=cds-WP_003401297.1;Parent=gene-AL55_RS07005;Dbxref=GenBank:WP_003401297.1;Name=WP_003401297.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214752.1;locus_tag=AL55_RS07005;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401297.1;transl_table=11 NZ_KK316828.1 RefSeq gene 287221 287454 . + . ID=gene-AL55_RS07010;Name=AL55_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07010;old_locus_tag=AL55_00250 NZ_KK316828.1 Protein Homology CDS 287221 287454 . + 0 ID=cds-WP_003401300.1;Parent=gene-AL55_RS07010;Dbxref=GenBank:WP_003401300.1;Name=WP_003401300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214753.1;locus_tag=AL55_RS07010;product=antitoxin;protein_id=WP_003401300.1;transl_table=11 NZ_KK316828.1 RefSeq gene 287462 287899 . + . ID=gene-AL55_RS07015;Name=AL55_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07015;old_locus_tag=AL55_00251 NZ_KK316828.1 Protein Homology CDS 287462 287899 . + 0 ID=cds-WP_003900837.1;Parent=gene-AL55_RS07015;Dbxref=GenBank:WP_003900837.1;Name=WP_003900837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214754.1;locus_tag=AL55_RS07015;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003900837.1;transl_table=11 NZ_KK316828.1 RefSeq gene 287929 288771 . - . ID=gene-AL55_RS07020;Name=htdX;gbkey=Gene;gene=htdX;gene_biotype=protein_coding;locus_tag=AL55_RS07020;old_locus_tag=AL55_00252 NZ_KK316828.1 Protein Homology CDS 287929 288771 . - 0 ID=cds-WP_003401305.1;Parent=gene-AL55_RS07020;Dbxref=GenBank:WP_003401305.1;Name=WP_003401305.1;gbkey=CDS;gene=htdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214755.1;locus_tag=AL55_RS07020;product=3-hydroxyacyl-thioester dehydratase HtdX;protein_id=WP_003401305.1;transl_table=11 NZ_KK316828.1 RefSeq gene 288782 290146 . - . ID=gene-AL55_RS07025;Name=AL55_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07025;old_locus_tag=AL55_00253 NZ_KK316828.1 Protein Homology CDS 288782 290146 . - 0 ID=cds-WP_031695333.1;Parent=gene-AL55_RS07025;Dbxref=GenBank:WP_031695333.1;Name=WP_031695333.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214756.1;locus_tag=AL55_RS07025;product=3-oxoacyl-ACP reductase;protein_id=WP_031695333.1;transl_table=11 NZ_KK316828.1 RefSeq gene 290288 291610 . + . ID=gene-AL55_RS07030;Name=AL55_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07030;old_locus_tag=AL55_00254 NZ_KK316828.1 Protein Homology CDS 290288 291610 . + 0 ID=cds-WP_003401309.1;Parent=gene-AL55_RS07030;Dbxref=GenBank:WP_003401309.1;Name=WP_003401309.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214757.1;locus_tag=AL55_RS07030;product=acetyl-CoA C-acetyltransferase;protein_id=WP_003401309.1;transl_table=11 NZ_KK316828.1 RefSeq gene 291916 293751 . - . ID=gene-AL55_RS07035;Name=AL55_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07035;old_locus_tag=AL55_00255 NZ_KK316828.1 Protein Homology CDS 291916 293751 . - 0 ID=cds-WP_003401312.1;Parent=gene-AL55_RS07035;Dbxref=GenBank:WP_003401312.1;Name=WP_003401312.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214758.1;locus_tag=AL55_RS07035;product=acyl-CoA dehydrogenase;protein_id=WP_003401312.1;transl_table=11 NZ_KK316828.1 RefSeq gene 294123 294611 . + . ID=gene-AL55_RS07040;Name=AL55_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07040;old_locus_tag=AL55_00256 NZ_KK316828.1 Protein Homology CDS 294123 294611 . + 0 ID=cds-WP_003911074.1;Parent=gene-AL55_RS07040;Dbxref=GenBank:WP_003911074.1;Name=WP_003911074.1;Ontology_term=GO:0010181,GO:0016491,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214759.1;locus_tag=AL55_RS07040;product=flavin reductase family protein;protein_id=WP_003911074.1;transl_table=11 NZ_KK316828.1 RefSeq gene 294927 296237 . + . ID=gene-AL55_RS07045;Name=AL55_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07045;old_locus_tag=AL55_00257 NZ_KK316828.1 Protein Homology CDS 294927 296237 . + 0 ID=cds-WP_003401317.1;Parent=gene-AL55_RS07045;Dbxref=GenBank:WP_003401317.1;Name=WP_003401317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214760.1;locus_tag=AL55_RS07045;product=integral membrane protein;protein_id=WP_003401317.1;transl_table=11 NZ_KK316828.1 RefSeq gene 296234 296980 . - . ID=gene-AL55_RS07050;Name=AL55_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07050;old_locus_tag=AL55_00258 NZ_KK316828.1 Protein Homology CDS 296234 296980 . - 0 ID=cds-WP_003401319.1;Parent=gene-AL55_RS07050;Dbxref=GenBank:WP_003401319.1;Name=WP_003401319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214761.1;locus_tag=AL55_RS07050;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_003401319.1;transl_table=11 NZ_KK316828.1 RefSeq gene 296981 298921 . - . ID=gene-AL55_RS07055;Name=AL55_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07055;old_locus_tag=AL55_00259 NZ_KK316828.1 Protein Homology CDS 296981 298921 . - 0 ID=cds-WP_003401322.1;Parent=gene-AL55_RS07055;Dbxref=GenBank:WP_003401322.1;Name=WP_003401322.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214762.1;locus_tag=AL55_RS07055;product=fumarate reductase/succinate dehydrogenase flavoprotein subunit;protein_id=WP_003401322.1;transl_table=11 NZ_KK316828.1 RefSeq gene 298952 299773 . - . ID=gene-AL55_RS07060;Name=AL55_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07060;old_locus_tag=AL55_00260 NZ_KK316828.1 Protein Homology CDS 298952 299773 . - 0 ID=cds-WP_003401324.1;Parent=gene-AL55_RS07060;Dbxref=GenBank:WP_003401324.1;Name=WP_003401324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214763.1;locus_tag=AL55_RS07060;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_003401324.1;transl_table=11 NZ_KK316828.1 RefSeq gene 299853 300146 . - . ID=gene-AL55_RS07065;Name=AL55_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07065;old_locus_tag=AL55_00261 NZ_KK316828.1 Protein Homology CDS 299853 300146 . - 0 ID=cds-WP_031721587.1;Parent=gene-AL55_RS07065;Dbxref=GenBank:WP_031721587.1;Name=WP_031721587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214764.1;locus_tag=AL55_RS07065;product=hypothetical protein;protein_id=WP_031721587.1;transl_table=11 NZ_KK316828.1 RefSeq gene 300291 300770 . - . ID=gene-AL55_RS07070;Name=acr2;gbkey=Gene;gene=acr2;gene_biotype=protein_coding;gene_synonym=hsp;locus_tag=AL55_RS07070;old_locus_tag=AL55_00262 NZ_KK316828.1 Protein Homology CDS 300291 300770 . - 0 ID=cds-WP_003900838.1;Parent=gene-AL55_RS07070;Dbxref=GenBank:WP_003900838.1;Name=WP_003900838.1;gbkey=CDS;gene=acr2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214765.1;locus_tag=AL55_RS07070;product=stress-responsive chaperone Acr2;protein_id=WP_003900838.1;transl_table=11 NZ_KK316828.1 RefSeq gene 300984 303545 . + . ID=gene-AL55_RS07075;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=AL55_RS07075;old_locus_tag=AL55_00263 NZ_KK316828.1 Protein Homology CDS 300984 303545 . + 0 ID=cds-WP_003911075.1;Parent=gene-AL55_RS07075;Dbxref=GenBank:WP_003911075.1;Name=WP_003911075.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214766.1;locus_tag=AL55_RS07075;product=nitrite reductase large subunit NirB;protein_id=WP_003911075.1;transl_table=11 NZ_KK316828.1 RefSeq gene 303571 303927 . + . ID=gene-AL55_RS07080;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=AL55_RS07080;old_locus_tag=AL55_00264 NZ_KK316828.1 Protein Homology CDS 303571 303927 . + 0 ID=cds-WP_003401341.1;Parent=gene-AL55_RS07080;Dbxref=GenBank:WP_003401341.1;Name=WP_003401341.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214767.1;locus_tag=AL55_RS07080;product=nitrite reductase small subunit NirD;protein_id=WP_003401341.1;transl_table=11 NZ_KK316828.1 RefSeq gene 303943 304467 . - . ID=gene-AL55_RS07085;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=AL55_RS07085;old_locus_tag=AL55_00265 NZ_KK316828.1 Protein Homology CDS 303943 304467 . - 0 ID=cds-WP_003899876.1;Parent=gene-AL55_RS07085;Dbxref=GenBank:WP_003899876.1;Name=WP_003899876.1;Ontology_term=GO:0009236,GO:0000166,GO:0008820,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,cobinamide phosphate guanylyltransferase activity|0008820||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214768.1;locus_tag=AL55_RS07085;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_003899876.1;transl_table=11 NZ_KK316828.1 RefSeq gene 304492 305976 . - . ID=gene-AL55_RS07090;Name=AL55_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07090;old_locus_tag=AL55_00266 NZ_KK316828.1 Protein Homology CDS 304492 305976 . - 0 ID=cds-WP_003899877.1;Parent=gene-AL55_RS07090;Dbxref=GenBank:WP_003899877.1;Name=WP_003899877.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177703.1;locus_tag=AL55_RS07090;product=cobyric acid synthase;protein_id=WP_003899877.1;transl_table=11 NZ_KK316828.1 RefSeq gene 305995 307665 . - . ID=gene-AL55_RS07095;Name=AL55_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07095;old_locus_tag=AL55_00267 NZ_KK316828.1 Protein Homology CDS 305995 307665 . - 0 ID=cds-WP_003401347.1;Parent=gene-AL55_RS07095;Dbxref=GenBank:WP_003401347.1;Name=WP_003401347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177704.1;locus_tag=AL55_RS07095;product=PPE family protein;protein_id=WP_003401347.1;transl_table=11 NZ_KK316828.1 cmsearch riboswitch 307804 307985 . - . ID=id-NZ_KK316828.1:307804..307985;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316828.1 RefSeq gene 308412 308867 . - . ID=gene-AL55_RS07105;Name=AL55_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07105;old_locus_tag=AL55_00269 NZ_KK316828.1 Protein Homology CDS 308412 308867 . - 0 ID=cds-WP_003401352.1;Parent=gene-AL55_RS07105;Dbxref=GenBank:WP_003401352.1;Name=WP_003401352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214772.1;locus_tag=AL55_RS07105;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401352.1;transl_table=11 NZ_KK316828.1 RefSeq gene 308892 309635 . - . ID=gene-AL55_RS07110;Name=AL55_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07110;old_locus_tag=AL55_00270 NZ_KK316828.1 Protein Homology CDS 308892 309635 . - 0 ID=cds-WP_003401354.1;Parent=gene-AL55_RS07110;Dbxref=GenBank:WP_003401354.1;Name=WP_003401354.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214773.1;locus_tag=AL55_RS07110;product=sirohydrochlorin chelatase;protein_id=WP_003401354.1;transl_table=11 NZ_KK316828.1 RefSeq gene 309632 310777 . - . ID=gene-AL55_RS07115;Name=AL55_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07115;old_locus_tag=AL55_00271 NZ_KK316828.1 Protein Homology CDS 309632 310777 . - 0 ID=cds-WP_003401357.1;Parent=gene-AL55_RS07115;Dbxref=GenBank:WP_003401357.1;Name=WP_003401357.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214774.1;locus_tag=AL55_RS07115;product=uroporphyrinogen-III synthase;protein_id=WP_003401357.1;transl_table=11 NZ_KK316828.1 RefSeq gene 310877 312286 . - . ID=gene-AL55_RS07120;Name=AL55_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07120;old_locus_tag=AL55_00272 NZ_KK316828.1 Protein Homology CDS 310877 312286 . - 0 ID=cds-WP_003401360.1;Parent=gene-AL55_RS07120;Dbxref=GenBank:WP_003401360.1;Name=WP_003401360.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214775.1;locus_tag=AL55_RS07120;product=MFS transporter;protein_id=WP_003401360.1;transl_table=11 NZ_KK316828.1 RefSeq gene 312427 312972 . - . ID=gene-AL55_RS07125;Name=aac(2')-Ic;gbkey=Gene;gene=aac(2')-Ic;gene_biotype=protein_coding;locus_tag=AL55_RS07125;old_locus_tag=AL55_00273 NZ_KK316828.1 Protein Homology CDS 312427 312972 . - 0 ID=cds-WP_003899880.1;Parent=gene-AL55_RS07125;Dbxref=GenBank:WP_003899880.1;Name=WP_003899880.1;gbkey=CDS;gene=aac(2')-Ic;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899880.1;locus_tag=AL55_RS07125;product=aminoglycoside N-acetyltransferase AAC(2')-Ic;protein_id=WP_003899880.1;transl_table=11 NZ_KK316828.1 RefSeq gene 312982 313884 . - . ID=gene-AL55_RS07130;Name=AL55_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07130;old_locus_tag=AL55_00274 NZ_KK316828.1 Protein Homology CDS 312982 313884 . - 0 ID=cds-WP_003401367.1;Parent=gene-AL55_RS07130;Dbxref=GenBank:WP_003401367.1;Name=WP_003401367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214777.1;locus_tag=AL55_RS07130;product=5-oxoprolinase/urea amidolyase family protein;protein_id=WP_003401367.1;transl_table=11 NZ_KK316828.1 RefSeq gene 313901 314533 . - . ID=gene-AL55_RS07135;Name=AL55_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07135;old_locus_tag=AL55_00275 NZ_KK316828.1 Protein Homology CDS 313901 314533 . - 0 ID=cds-WP_003401370.1;Parent=gene-AL55_RS07135;Dbxref=GenBank:WP_003401370.1;Name=WP_003401370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214778.1;locus_tag=AL55_RS07135;product=5-oxoprolinase subunit B family protein;protein_id=WP_003401370.1;transl_table=11 NZ_KK316828.1 RefSeq gene 314629 315621 . - . ID=gene-AL55_RS07140;Name=AL55_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07140;old_locus_tag=AL55_00276 NZ_KK316828.1 Protein Homology CDS 314629 315621 . - 0 ID=cds-WP_003401373.1;Parent=gene-AL55_RS07140;Dbxref=GenBank:WP_003401373.1;Name=WP_003401373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177705.1;locus_tag=AL55_RS07140;product=ABC transporter substrate-binding protein;protein_id=WP_003401373.1;transl_table=11 NZ_KK316828.1 RefSeq gene 315643 319272 . - . ID=gene-AL55_RS07145;Name=oplA;gbkey=Gene;gene=oplA;gene_biotype=protein_coding;locus_tag=AL55_RS07145;old_locus_tag=AL55_00277 NZ_KK316828.1 Protein Homology CDS 315643 319272 . - 0 ID=cds-WP_003899883.1;Parent=gene-AL55_RS07145;Dbxref=GenBank:WP_003899883.1;Name=WP_003899883.1;Ontology_term=GO:0003824;gbkey=CDS;gene=oplA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214780.1;locus_tag=AL55_RS07145;product=hydantoinase B/oxoprolinase family protein;protein_id=WP_003899883.1;transl_table=11 NZ_KK316828.1 RefSeq gene 319449 320840 . + . ID=gene-AL55_RS07150;Name=narU;gbkey=Gene;gene=narU;gene_biotype=protein_coding;locus_tag=AL55_RS07150;old_locus_tag=AL55_00278 NZ_KK316828.1 Protein Homology CDS 319449 320840 . + 0 ID=cds-WP_003401380.1;Parent=gene-AL55_RS07150;Dbxref=GenBank:WP_003401380.1;Name=WP_003401380.1;Ontology_term=GO:0015706,GO:0015707,GO:0015112,GO:0015113,GO:0016020;gbkey=CDS;gene=narU;go_component=membrane|0016020||IEA;go_function=nitrate transmembrane transporter activity|0015112||IEA,nitrite transmembrane transporter activity|0015113||IEA;go_process=nitrate transmembrane transport|0015706||IEA,nitrite transport|0015707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214781.1;locus_tag=AL55_RS07150;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_003401380.1;transl_table=11 NZ_KK316828.1 RefSeq gene 320882 321139 . - . ID=gene-AL55_RS27185;Name=AL55_RS27185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27185 NZ_KK316828.1 Protein Homology CDS 320882 321139 . - 0 ID=cds-WP_003911137.1;Parent=gene-AL55_RS27185;Dbxref=GenBank:WP_003911137.1;Name=WP_003911137.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: protein motif:HMM:TIGR01552.1;locus_tag=AL55_RS27185;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003911137.1;transl_table=11 NZ_KK316828.1 RefSeq gene 321136 321261 . - . ID=gene-AL55_RS27505;Name=AL55_RS27505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27505 NZ_KK316828.1 Protein Homology CDS 321136 321261 . - 0 ID=cds-WP_003918044.1;Parent=gene-AL55_RS27505;Dbxref=GenBank:WP_003918044.1;Name=WP_003918044.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: protein motif:HMM:NF016876.6;locus_tag=AL55_RS27505;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_003918044.1;transl_table=11 NZ_KK316828.1 RefSeq gene 321456 322649 . - . ID=gene-AL55_RS07160;Name=AL55_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07160;old_locus_tag=AL55_00280 NZ_KK316828.1 Protein Homology CDS 321456 322649 . - 0 ID=cds-WP_003401386.1;Parent=gene-AL55_RS07160;Dbxref=GenBank:WP_003401386.1;Name=WP_003401386.1;Ontology_term=GO:0006281;gbkey=CDS;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214783.1;locus_tag=AL55_RS07160;product=DNA polymerase domain-containing protein;protein_id=WP_003401386.1;transl_table=11 NZ_KK316828.1 RefSeq gene 322685 324367 . + . ID=gene-AL55_RS07165;Name=fadD2;gbkey=Gene;gene=fadD2;gene_biotype=protein_coding;locus_tag=AL55_RS07165;old_locus_tag=AL55_00281 NZ_KK316828.1 Protein Homology CDS 322685 324367 . + 0 ID=cds-WP_003899884.1;Parent=gene-AL55_RS07165;Dbxref=GenBank:WP_003899884.1;Name=WP_003899884.1;gbkey=CDS;gene=fadD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214784.1;locus_tag=AL55_RS07165;product=long-chain-fatty-acid--CoA ligase FadD2;protein_id=WP_003899884.1;transl_table=11 NZ_KK316828.1 RefSeq gene 324384 326579 . - . ID=gene-AL55_RS07170;Name=AL55_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07170;old_locus_tag=AL55_00282 NZ_KK316828.1 Protein Homology CDS 324384 326579 . - 0 ID=cds-WP_003401392.1;Parent=gene-AL55_RS07170;Dbxref=GenBank:WP_003401392.1;Name=WP_003401392.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214785.1;locus_tag=AL55_RS07170;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003401392.1;transl_table=11 NZ_KK316828.1 RefSeq gene 326693 327826 . - . ID=gene-AL55_RS07175;Name=AL55_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07175;old_locus_tag=AL55_00283 NZ_KK316828.1 Protein Homology CDS 326693 327826 . - 0 ID=cds-WP_003401394.1;Parent=gene-AL55_RS07175;Dbxref=GenBank:WP_003401394.1;Name=WP_003401394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214786.1;locus_tag=AL55_RS07175;product=alpha/beta fold hydrolase domain-containing protein;protein_id=WP_003401394.1;transl_table=11 NZ_KK316828.1 RefSeq gene 327823 328443 . - . ID=gene-AL55_RS07180;Name=AL55_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07180;old_locus_tag=AL55_00284 NZ_KK316828.1 Protein Homology CDS 327823 328443 . - 0 ID=cds-WP_003401397.1;Parent=gene-AL55_RS07180;Dbxref=GenBank:WP_003401397.1;Name=WP_003401397.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214787.1;locus_tag=AL55_RS07180;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401397.1;transl_table=11 NZ_KK316828.1 RefSeq gene 328540 329121 . + . ID=gene-AL55_RS07185;Name=AL55_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07185;old_locus_tag=AL55_00285 NZ_KK316828.1 Protein Homology CDS 328540 329121 . + 0 ID=cds-WP_003401399.1;Parent=gene-AL55_RS07185;Dbxref=GenBank:WP_003401399.1;Name=WP_003401399.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214788.1;locus_tag=AL55_RS07185;product=VOC family protein;protein_id=WP_003401399.1;transl_table=11 NZ_KK316828.1 RefSeq gene 329051 329776 . - . ID=gene-AL55_RS07190;Name=AL55_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07190;old_locus_tag=AL55_00286 NZ_KK316828.1 Protein Homology CDS 329051 329776 . - 0 ID=cds-WP_003899886.1;Parent=gene-AL55_RS07190;Dbxref=GenBank:WP_003899886.1;Name=WP_003899886.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177706.1;locus_tag=AL55_RS07190;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899886.1;transl_table=11 NZ_KK316828.1 RefSeq gene 329866 330786 . + . ID=gene-AL55_RS07195;Name=AL55_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07195;old_locus_tag=AL55_00287 NZ_KK316828.1 Protein Homology CDS 329866 330786 . + 0 ID=cds-WP_003401404.1;Parent=gene-AL55_RS07195;Dbxref=GenBank:WP_003401404.1;Name=WP_003401404.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214790.1;locus_tag=AL55_RS07195;product=oxygenase MpaB family protein;protein_id=WP_003401404.1;transl_table=11 NZ_KK316828.1 RefSeq gene 330826 331254 . - . ID=gene-AL55_RS07200;Name=AL55_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07200;old_locus_tag=AL55_00288 NZ_KK316828.1 Protein Homology CDS 330826 331254 . - 0 ID=cds-WP_003401406.1;Parent=gene-AL55_RS07200;Dbxref=GenBank:WP_003401406.1;Name=WP_003401406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214791.1;locus_tag=AL55_RS07200;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003401406.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 331278 331535 . - . ID=gene-AL55_RS07205;Name=vapB25;gbkey=Gene;gene=vapB25;gene_biotype=pseudogene;locus_tag=AL55_RS07205;old_locus_tag=AL55_00289;pseudo=true NZ_KK316828.1 Protein Homology CDS 331278 331535 . - 0 ID=cds-AL55_RS07205;Parent=gene-AL55_RS07205;Note=internal stop;gbkey=CDS;gene=vapB25;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215262.1;locus_tag=AL55_RS07205;product=type II toxin-antitoxin system antitoxin vapB25;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 331555 334362 . - . ID=gene-AL55_RS07210;Name=AL55_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07210;old_locus_tag=AL55_00290 NZ_KK316828.1 Protein Homology CDS 331555 334362 . - 0 ID=cds-WP_025202582.1;Parent=gene-AL55_RS07210;Dbxref=GenBank:WP_025202582.1;Name=WP_025202582.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177707.1;locus_tag=AL55_RS07210;product=PE family protein;protein_id=WP_025202582.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 334612 337334 . - . ID=gene-AL55_RS07215;Name=AL55_RS07215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS07215;old_locus_tag=AL55_00291;partial=true;pseudo=true;start_range=.,334612 NZ_KK316828.1 Protein Homology CDS 334612 337334 . - 0 ID=cds-AL55_RS07215;Parent=gene-AL55_RS07215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177707.1;locus_tag=AL55_RS07215;partial=true;product=PE family protein;pseudo=true;start_range=.,334612;transl_table=11 NZ_KK316828.1 RefSeq gene 337625 339235 . + . ID=gene-AL55_RS07220;Name=AL55_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07220;old_locus_tag=AL55_00292 NZ_KK316828.1 Protein Homology CDS 337625 339235 . + 0 ID=cds-WP_003902643.1;Parent=gene-AL55_RS07220;Dbxref=GenBank:WP_003902643.1;Name=WP_003902643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177709.1;locus_tag=AL55_RS07220;product=PPE family protein;protein_id=WP_003902643.1;transl_table=11 NZ_KK316828.1 RefSeq gene 339259 340167 . + . ID=gene-AL55_RS07225;Name=AL55_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07225;old_locus_tag=AL55_00293 NZ_KK316828.1 Protein Homology CDS 339259 340167 . + 0 ID=cds-WP_003401448.1;Parent=gene-AL55_RS07225;Dbxref=GenBank:WP_003401448.1;Name=WP_003401448.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214795.1;locus_tag=AL55_RS07225;product=class I SAM-dependent methyltransferase;protein_id=WP_003401448.1;transl_table=11 NZ_KK316828.1 RefSeq gene 340424 342286 . + . ID=gene-AL55_RS07230;Name=eccA3;gbkey=Gene;gene=eccA3;gene_biotype=protein_coding;locus_tag=AL55_RS07230;old_locus_tag=AL55_00294 NZ_KK316828.1 Protein Homology CDS 340424 342286 . + 0 ID=cds-WP_003911145.1;Parent=gene-AL55_RS07230;Dbxref=GenBank:WP_003911145.1;Name=WP_003911145.1;gbkey=CDS;gene=eccA3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911145.1;locus_tag=AL55_RS07230;product=type VII secretion system ESX-3 AAA family ATPase EccA3;protein_id=WP_003911145.1;transl_table=11 NZ_KK316828.1 RefSeq gene 342283 343899 . + . ID=gene-AL55_RS07235;Name=eccB3;gbkey=Gene;gene=eccB3;gene_biotype=protein_coding;locus_tag=AL55_RS07235;old_locus_tag=AL55_00295 NZ_KK316828.1 Protein Homology CDS 342283 343899 . + 0 ID=cds-WP_003401472.1;Parent=gene-AL55_RS07235;Dbxref=GenBank:WP_003401472.1;Name=WP_003401472.1;gbkey=CDS;gene=eccB3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214797.1;locus_tag=AL55_RS07235;product=type VII secretion system ESX-3 subunit EccB3;protein_id=WP_003401472.1;transl_table=11 NZ_KK316828.1 RefSeq gene 343896 347888 . + . ID=gene-AL55_RS07240;Name=eccC3;gbkey=Gene;gene=eccC3;gene_biotype=protein_coding;locus_tag=AL55_RS07240;old_locus_tag=AL55_00296 NZ_KK316828.1 Protein Homology CDS 343896 347888 . + 0 ID=cds-WP_003401478.1;Parent=gene-AL55_RS07240;Dbxref=GenBank:WP_003401478.1;Name=WP_003401478.1;gbkey=CDS;gene=eccC3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214798.1;locus_tag=AL55_RS07240;product=type VII secretion system ESX-3 FtsK/SpoIIIE family ATPase EccC3;protein_id=WP_003401478.1;transl_table=11 NZ_KK316828.1 RefSeq gene 347885 348193 . + . ID=gene-AL55_RS07245;Name=AL55_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07245;old_locus_tag=AL55_00297 NZ_KK316828.1 Protein Homology CDS 347885 348193 . + 0 ID=cds-WP_003401485.1;Parent=gene-AL55_RS07245;Dbxref=GenBank:WP_003401485.1;Name=WP_003401485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177710.1;locus_tag=AL55_RS07245;product=type VII secretion system ESX-3 target PE5;protein_id=WP_003401485.1;transl_table=11 NZ_KK316828.1 RefSeq gene 348196 349737 . + . ID=gene-AL55_RS07250;Name=AL55_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07250;old_locus_tag=AL55_00298 NZ_KK316828.1 Protein Homology CDS 348196 349737 . + 0 ID=cds-WP_003401488.1;Parent=gene-AL55_RS07250;Dbxref=GenBank:WP_003401488.1;Name=WP_003401488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177711.1;locus_tag=AL55_RS07250;product=type VII secretion system ESX-3 target PPE4;protein_id=WP_003401488.1;transl_table=11 NZ_KK316828.1 RefSeq gene 349786 350079 . + . ID=gene-AL55_RS07255;Name=esxG;gbkey=Gene;gene=esxG;gene_biotype=protein_coding;locus_tag=AL55_RS07255;old_locus_tag=AL55_00299 NZ_KK316828.1 Protein Homology CDS 349786 350079 . + 0 ID=cds-WP_003401503.1;Parent=gene-AL55_RS07255;Dbxref=GenBank:WP_003401503.1;Name=WP_003401503.1;gbkey=CDS;gene=esxG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214801.1;locus_tag=AL55_RS07255;product=type VII secretion system protein EsxG;protein_id=WP_003401503.1;transl_table=11 NZ_KK316828.1 RefSeq gene 350109 350399 . + . ID=gene-AL55_RS07260;Name=esxH;gbkey=Gene;gene=esxH;gene_biotype=protein_coding;locus_tag=AL55_RS07260;old_locus_tag=AL55_00300 NZ_KK316828.1 Protein Homology CDS 350109 350399 . + 0 ID=cds-WP_003401514.1;Parent=gene-AL55_RS07260;Dbxref=GenBank:WP_003401514.1;Name=WP_003401514.1;gbkey=CDS;gene=esxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214802.1;locus_tag=AL55_RS07260;product=type VII secretion system effector EsxH;protein_id=WP_003401514.1;transl_table=11 NZ_KK316828.1 RefSeq gene 350410 351297 . + . ID=gene-AL55_RS07265;Name=espG3;gbkey=Gene;gene=espG3;gene_biotype=protein_coding;locus_tag=AL55_RS07265;old_locus_tag=AL55_00301 NZ_KK316828.1 Protein Homology CDS 350410 351297 . + 0 ID=cds-WP_003401521.1;Parent=gene-AL55_RS07265;Dbxref=GenBank:WP_003401521.1;Name=WP_003401521.1;gbkey=CDS;gene=espG3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214803.1;locus_tag=AL55_RS07265;product=type VII secretion system ESX-3 associated protein EspG3;protein_id=WP_003401521.1;transl_table=11 NZ_KK316828.1 RefSeq gene 351344 352762 . + . ID=gene-AL55_RS07270;Name=eccD3;gbkey=Gene;gene=eccD3;gene_biotype=protein_coding;locus_tag=AL55_RS07270;old_locus_tag=AL55_00302 NZ_KK316828.1 Protein Homology CDS 351344 352762 . + 0 ID=cds-WP_003902645.1;Parent=gene-AL55_RS07270;Dbxref=GenBank:WP_003902645.1;Name=WP_003902645.1;gbkey=CDS;gene=eccD3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214804.1;locus_tag=AL55_RS07270;product=type VII secretion system ESX-3 subunit EccD3;protein_id=WP_003902645.1;transl_table=11 NZ_KK316828.1 RefSeq gene 352759 354144 . + . ID=gene-AL55_RS07275;Name=mycP3;gbkey=Gene;gene=mycP3;gene_biotype=protein_coding;locus_tag=AL55_RS07275;old_locus_tag=AL55_00303 NZ_KK316828.1 Protein Homology CDS 352759 354144 . + 0 ID=cds-WP_003401528.1;Parent=gene-AL55_RS07275;Dbxref=GenBank:WP_003401528.1;Name=WP_003401528.1;gbkey=CDS;gene=mycP3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214805.1;locus_tag=AL55_RS07275;product=type VII secretion system ESX-3 serine protease mycosin MycP3;protein_id=WP_003401528.1;transl_table=11 NZ_KK316828.1 RefSeq gene 354141 355136 . + . ID=gene-AL55_RS07280;Name=eccE3;gbkey=Gene;gene=eccE3;gene_biotype=protein_coding;locus_tag=AL55_RS07280;old_locus_tag=AL55_00304 NZ_KK316828.1 Protein Homology CDS 354141 355136 . + 0 ID=cds-WP_003401533.1;Parent=gene-AL55_RS07280;Dbxref=GenBank:WP_003401533.1;Name=WP_003401533.1;gbkey=CDS;gene=eccE3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214806.1;locus_tag=AL55_RS07280;product=type VII secretion system ESX-3 subunit EccE3;protein_id=WP_003401533.1;transl_table=11 NZ_KK316828.1 RefSeq gene 355123 356325 . - . ID=gene-AL55_RS07285;Name=AL55_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07285;old_locus_tag=AL55_00305 NZ_KK316828.1 Protein Homology CDS 355123 356325 . - 0 ID=cds-WP_003898396.1;Parent=gene-AL55_RS07285;Dbxref=GenBank:WP_003898396.1;Name=WP_003898396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214807.1;locus_tag=AL55_RS07285;product=alpha/beta fold hydrolase;protein_id=WP_003898396.1;transl_table=11 NZ_KK316828.1 RefSeq gene 356432 357217 . + . ID=gene-AL55_RS07290;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=AL55_RS07290;old_locus_tag=AL55_00306 NZ_KK316828.1 Protein Homology CDS 356432 357217 . + 0 ID=cds-WP_003401538.1;Parent=gene-AL55_RS07290;Dbxref=GenBank:WP_003401538.1;Name=WP_003401538.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214808.1;locus_tag=AL55_RS07290;product=trans-aconitate 2-methyltransferase;protein_id=WP_003401538.1;transl_table=11 NZ_KK316828.1 RefSeq gene 357206 358009 . - . ID=gene-AL55_RS07295;Name=stf0;gbkey=Gene;gene=stf0;gene_biotype=protein_coding;locus_tag=AL55_RS07295;old_locus_tag=AL55_00307 NZ_KK316828.1 Protein Homology CDS 357206 358009 . - 0 ID=cds-WP_003401540.1;Parent=gene-AL55_RS07295;Dbxref=GenBank:WP_003401540.1;Name=WP_003401540.1;Ontology_term=GO:0016740;gbkey=CDS;gene=stf0;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214809.1;locus_tag=AL55_RS07295;product=trehalose 2-sulfotransferase;protein_id=WP_003401540.1;transl_table=11 NZ_KK316828.1 RefSeq gene 358019 359416 . - . ID=gene-AL55_RS07300;Name=AL55_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07300;old_locus_tag=AL55_00308 NZ_KK316828.1 Protein Homology CDS 358019 359416 . - 0 ID=cds-WP_003401544.1;Parent=gene-AL55_RS07300;Dbxref=GenBank:WP_003401544.1;Name=WP_003401544.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177712.1;locus_tag=AL55_RS07300;product=sulfatase family protein;protein_id=WP_003401544.1;transl_table=11 NZ_KK316828.1 RefSeq gene 359595 361370 . + . ID=gene-AL55_RS07305;Name=AL55_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07305;old_locus_tag=AL55_00309 NZ_KK316828.1 Protein Homology CDS 359595 361370 . + 0 ID=cds-WP_010886074.1;Parent=gene-AL55_RS07305;Dbxref=GenBank:WP_010886074.1;Name=WP_010886074.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177713.1;locus_tag=AL55_RS07305;product=PE family protein;protein_id=WP_010886074.1;transl_table=11 NZ_KK316828.1 RefSeq gene 361513 361740 . + . ID=gene-AL55_RS07310;Name=AL55_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07310;old_locus_tag=AL55_00310 NZ_KK316828.1 Protein Homology CDS 361513 361740 . + 0 ID=cds-WP_003401555.1;Parent=gene-AL55_RS07310;Dbxref=GenBank:WP_003401555.1;Name=WP_003401555.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214812.1;locus_tag=AL55_RS07310;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003401555.1;transl_table=11 NZ_KK316828.1 RefSeq gene 361737 362039 . + . ID=gene-AL55_RS07315;Name=AL55_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07315;old_locus_tag=AL55_00311 NZ_KK316828.1 Protein Homology CDS 361737 362039 . + 0 ID=cds-WP_003401560.1;Parent=gene-AL55_RS07315;Dbxref=GenBank:WP_003401560.1;Name=WP_003401560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214813.1;locus_tag=AL55_RS07315;product=toxin-antitoxin system toxin;protein_id=WP_003401560.1;transl_table=11 NZ_KK316828.1 RefSeq gene 362087 362308 . + . ID=gene-AL55_RS07320;Name=vapB2;gbkey=Gene;gene=vapB2;gene_biotype=protein_coding;locus_tag=AL55_RS07320;old_locus_tag=AL55_00312 NZ_KK316828.1 Protein Homology CDS 362087 362308 . + 0 ID=cds-WP_003401563.1;Parent=gene-AL55_RS07320;Dbxref=GenBank:WP_003401563.1;Name=WP_003401563.1;gbkey=CDS;gene=vapB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214814.1;locus_tag=AL55_RS07320;product=type II toxin-antitoxin system antitoxin VapB2;protein_id=WP_003401563.1;transl_table=11 NZ_KK316828.1 RefSeq gene 362305 362730 . + . ID=gene-AL55_RS07325;Name=AL55_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07325;old_locus_tag=AL55_00313 NZ_KK316828.1 Protein Homology CDS 362305 362730 . + 0 ID=cds-WP_003401566.1;Parent=gene-AL55_RS07325;Dbxref=GenBank:WP_003401566.1;Name=WP_003401566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214815.1;locus_tag=AL55_RS07325;product=PIN domain nuclease;protein_id=WP_003401566.1;transl_table=11 NZ_KK316828.1 RefSeq gene 362866 363498 . + . ID=gene-AL55_RS07330;Name=AL55_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07330;old_locus_tag=AL55_00314 NZ_KK316828.1 Protein Homology CDS 362866 363498 . + 0 ID=cds-WP_003905275.1;Parent=gene-AL55_RS07330;Dbxref=GenBank:WP_003905275.1;Name=WP_003905275.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214816.1;locus_tag=AL55_RS07330;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003905275.1;transl_table=11 NZ_KK316828.1 RefSeq gene 363495 364403 . + . ID=gene-AL55_RS07335;Name=AL55_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07335;old_locus_tag=AL55_00315 NZ_KK316828.1 Protein Homology CDS 363495 364403 . + 0 ID=cds-WP_003900117.1;Parent=gene-AL55_RS07335;Dbxref=GenBank:WP_003900117.1;Name=WP_003900117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214817.1;locus_tag=AL55_RS07335;product=protochlorophyllide reductase;protein_id=WP_003900117.1;transl_table=11 NZ_KK316828.1 RefSeq gene 364411 373956 . - . ID=gene-AL55_RS0104195;Name=AL55_RS0104195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104195;old_locus_tag=AL55_00316 NZ_KK316828.1 Protein Homology CDS 364411 373956 . - 0 ID=cds-WP_031721876.1;Parent=gene-AL55_RS0104195;Dbxref=GenBank:WP_031721876.1;Name=WP_031721876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913099.1;locus_tag=AL55_RS0104195;product=PPE domain-containing protein;protein_id=WP_031721876.1;transl_table=11 NZ_KK316828.1 RefSeq gene 374159 374830 . + . ID=gene-AL55_RS07340;Name=bluB;gbkey=Gene;gene=bluB;gene_biotype=protein_coding;locus_tag=AL55_RS07340;old_locus_tag=AL55_00318 NZ_KK316828.1 Protein Homology CDS 374159 374830 . + 0 ID=cds-WP_003401584.1;Parent=gene-AL55_RS07340;Dbxref=GenBank:WP_003401584.1;Name=WP_003401584.1;Ontology_term=GO:0009236,GO:0032363,GO:0016722;gbkey=CDS;gene=bluB;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,FMN catabolic process|0032363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214820.1;locus_tag=AL55_RS07340;product=5%2C6-dimethylbenzimidazole synthase;protein_id=WP_003401584.1;transl_table=11 NZ_KK316828.1 RefSeq gene 374818 375300 . - . ID=gene-AL55_RS07345;Name=AL55_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07345;old_locus_tag=AL55_00319 NZ_KK316828.1 Protein Homology CDS 374818 375300 . - 0 ID=cds-WP_003401589.1;Parent=gene-AL55_RS07345;Dbxref=GenBank:WP_003401589.1;Name=WP_003401589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214821.1;locus_tag=AL55_RS07345;product=hypothetical protein;protein_id=WP_003401589.1;transl_table=11 NZ_KK316828.1 RefSeq gene 375358 376074 . + . ID=gene-AL55_RS07350;Name=AL55_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07350;old_locus_tag=AL55_00320 NZ_KK316828.1 Protein Homology CDS 375358 376074 . + 0 ID=cds-WP_031695338.1;Parent=gene-AL55_RS07350;Dbxref=GenBank:WP_031695338.1;Name=WP_031695338.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214822.1;locus_tag=AL55_RS07350;product=phosphatase PAP2 family protein;protein_id=WP_031695338.1;transl_table=11 NZ_KK316828.1 RefSeq gene 376176 376832 . + . ID=gene-AL55_RS07355;Name=AL55_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07355;old_locus_tag=AL55_00321 NZ_KK316828.1 Protein Homology CDS 376176 376832 . + 0 ID=cds-WP_003401597.1;Parent=gene-AL55_RS07355;Dbxref=GenBank:WP_003401597.1;Name=WP_003401597.1;Ontology_term=GO:0018104,GO:0071972;gbkey=CDS;go_function=peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214823.1;locus_tag=AL55_RS07355;product=L%2CD-transpeptidase family protein;protein_id=WP_003401597.1;transl_table=11 NZ_KK316828.1 RefSeq gene 376902 377393 . - . ID=gene-AL55_RS07360;Name=AL55_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07360;old_locus_tag=AL55_00322 NZ_KK316828.1 Protein Homology CDS 376902 377393 . - 0 ID=cds-WP_003401601.1;Parent=gene-AL55_RS07360;Dbxref=GenBank:WP_003401601.1;Name=WP_003401601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214824.1;locus_tag=AL55_RS07360;product=nuclear transport factor 2 family protein;protein_id=WP_003401601.1;transl_table=11 NZ_KK316828.1 RefSeq gene 377417 378646 . + . ID=gene-AL55_RS07365;Name=AL55_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07365;old_locus_tag=AL55_00323 NZ_KK316828.1 Protein Homology CDS 377417 378646 . + 0 ID=cds-WP_003902650.1;Parent=gene-AL55_RS07365;Dbxref=GenBank:WP_003902650.1;Name=WP_003902650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214825.1;locus_tag=AL55_RS07365;product=hypothetical protein;protein_id=WP_003902650.1;transl_table=11 NZ_KK316828.1 RefSeq gene 378801 380663 . + . ID=gene-AL55_RS07370;Name=AL55_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07370;old_locus_tag=AL55_00324 NZ_KK316828.1 Protein Homology CDS 378801 380663 . + 0 ID=cds-WP_003900119.1;Parent=gene-AL55_RS07370;Dbxref=GenBank:WP_003900119.1;Name=WP_003900119.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214826.1;locus_tag=AL55_RS07370;product=Hsp70 family protein;protein_id=WP_003900119.1;transl_table=11 NZ_KK316828.1 RefSeq gene 380735 381121 . + . ID=gene-AL55_RS07375;Name=AL55_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07375;old_locus_tag=AL55_00325 NZ_KK316828.1 Protein Homology CDS 380735 381121 . + 0 ID=cds-WP_003401613.1;Parent=gene-AL55_RS07375;Dbxref=GenBank:WP_003401613.1;Name=WP_003401613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214827.1;locus_tag=AL55_RS07375;product=hypothetical protein;protein_id=WP_003401613.1;transl_table=11 NZ_KK316828.1 RefSeq gene 381124 381759 . - . ID=gene-AL55_RS07380;Name=AL55_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07380;old_locus_tag=AL55_00326 NZ_KK316828.1 Protein Homology CDS 381124 381759 . - 0 ID=cds-WP_003902950.1;Parent=gene-AL55_RS07380;Dbxref=GenBank:WP_003902950.1;Name=WP_003902950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873918.1;locus_tag=AL55_RS07380;product=DUF3060 domain-containing protein;protein_id=WP_003902950.1;transl_table=11 NZ_KK316828.1 RefSeq gene 381847 382731 . + . ID=gene-AL55_RS07385;Name=AL55_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07385;old_locus_tag=AL55_00327 NZ_KK316828.1 Protein Homology CDS 381847 382731 . + 0 ID=cds-WP_003905279.1;Parent=gene-AL55_RS07385;Dbxref=GenBank:WP_003905279.1;Name=WP_003905279.1;Ontology_term=GO:0005975,GO:0004553,GO:0030246;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214829.1;locus_tag=AL55_RS07385;product=glycoside hydrolase family 16 protein;protein_id=WP_003905279.1;transl_table=11 NZ_KK316828.1 RefSeq gene 382780 383394 . + . ID=gene-AL55_RS07390;Name=AL55_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07390;old_locus_tag=AL55_00328 NZ_KK316828.1 Protein Homology CDS 382780 383394 . + 0 ID=cds-WP_003401623.1;Parent=gene-AL55_RS07390;Dbxref=GenBank:WP_003401623.1;Name=WP_003401623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214830.1;locus_tag=AL55_RS07390;product=muconolactone Delta-isomerase family protein;protein_id=WP_003401623.1;transl_table=11 NZ_KK316828.1 RefSeq gene 383418 384188 . - . ID=gene-AL55_RS07395;Name=AL55_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07395;old_locus_tag=AL55_00329 NZ_KK316828.1 Protein Homology CDS 383418 384188 . - 0 ID=cds-WP_003401625.1;Parent=gene-AL55_RS07395;Dbxref=GenBank:WP_003401625.1;Name=WP_003401625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214831.1;locus_tag=AL55_RS07395;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_003401625.1;transl_table=11 NZ_KK316828.1 RefSeq gene 384449 384519 . - . ID=gene-AL55_RS07400;Name=AL55_RS07400;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS07400;old_locus_tag=AL55_00330 NZ_KK316828.1 tRNAscan-SE tRNA 384449 384519 . - . ID=rna-AL55_RS07400;Parent=gene-AL55_RS07400;anticodon=(pos:complement(384485..384487));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS07400;product=tRNA-Gly NZ_KK316828.1 tRNAscan-SE exon 384449 384519 . - . ID=exon-AL55_RS07400-1;Parent=rna-AL55_RS07400;anticodon=(pos:complement(384485..384487));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS07400;product=tRNA-Gly NZ_KK316828.1 RefSeq gene 384550 385344 . - . ID=gene-AL55_RS07405;Name=AL55_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07405;old_locus_tag=AL55_00331 NZ_KK316828.1 Protein Homology CDS 384550 385344 . - 0 ID=cds-WP_003401627.1;Parent=gene-AL55_RS07405;Dbxref=GenBank:WP_003401627.1;Name=WP_003401627.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177716.1;locus_tag=AL55_RS07405;product=ZIP family metal transporter;protein_id=WP_003401627.1;transl_table=11 NZ_KK316828.1 RefSeq gene 385393 386061 . + . ID=gene-AL55_RS07410;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=AL55_RS07410;old_locus_tag=AL55_00332 NZ_KK316828.1 Protein Homology CDS 385393 386061 . + 0 ID=cds-WP_003401632.1;Parent=gene-AL55_RS07410;Dbxref=GenBank:WP_003401632.1;Name=WP_003401632.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214833.1;locus_tag=AL55_RS07410;product=pyroglutamyl-peptidase I;protein_id=WP_003401632.1;transl_table=11 NZ_KK316828.1 RefSeq gene 386133 386795 . + . ID=gene-AL55_RS07415;Name=AL55_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07415;old_locus_tag=AL55_00333 NZ_KK316828.1 Protein Homology CDS 386133 386795 . + 0 ID=cds-WP_003401636.1;Parent=gene-AL55_RS07415;Dbxref=GenBank:WP_003401636.1;Name=WP_003401636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214834.1;locus_tag=AL55_RS07415;product=VldE C-terminal domain-containing protein;protein_id=WP_003401636.1;transl_table=11 NZ_KK316828.1 RefSeq gene 386827 387399 . + . ID=gene-AL55_RS07420;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AL55_RS07420;old_locus_tag=AL55_00334 NZ_KK316828.1 Protein Homology CDS 386827 387399 . + 0 ID=cds-WP_003898399.1;Parent=gene-AL55_RS07420;Dbxref=GenBank:WP_003898399.1;Name=WP_003898399.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214835.1;locus_tag=AL55_RS07420;product=dCTP deaminase;protein_id=WP_003898399.1;transl_table=11 NZ_KK316828.1 RefSeq gene 387505 388836 . + . ID=gene-AL55_RS07425;Name=udgA;gbkey=Gene;gene=udgA;gene_biotype=protein_coding;locus_tag=AL55_RS07425;old_locus_tag=AL55_00335 NZ_KK316828.1 Protein Homology CDS 387505 388836 . + 0 ID=cds-WP_003898400.1;Parent=gene-AL55_RS07425;Dbxref=GenBank:WP_003898400.1;Name=WP_003898400.1;Ontology_term=GO:0016616;gbkey=CDS;gene=udgA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214836.1;locus_tag=AL55_RS07425;product=UDP-glucose dehydrogenase family protein;protein_id=WP_003898400.1;transl_table=11 NZ_KK316828.1 RefSeq gene 388825 389496 . - . ID=gene-AL55_RS07430;Name=AL55_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07430;old_locus_tag=AL55_00336 NZ_KK316828.1 Protein Homology CDS 388825 389496 . - 0 ID=cds-WP_003401643.1;Parent=gene-AL55_RS07430;Dbxref=GenBank:WP_003401643.1;Name=WP_003401643.1;Ontology_term=GO:0006506,GO:0000225;gbkey=CDS;go_function=N-acetylglucosaminylphosphatidylinositol deacetylase activity|0000225||IEA;go_process=GPI anchor biosynthetic process|0006506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214837.1;locus_tag=AL55_RS07430;product=PIG-L family deacetylase;protein_id=WP_003401643.1;transl_table=11 NZ_KK316828.1 RefSeq gene 389597 390277 . + . ID=gene-AL55_RS07435;Name=AL55_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07435;old_locus_tag=AL55_00337 NZ_KK316828.1 Protein Homology CDS 389597 390277 . + 0 ID=cds-WP_003401648.1;Parent=gene-AL55_RS07435;Dbxref=GenBank:WP_003401648.1;Name=WP_003401648.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214838.1;locus_tag=AL55_RS07435;product=Rv0324 family HTH-type transcriptional regulator;protein_id=WP_003401648.1;transl_table=11 NZ_KK316828.1 RefSeq gene 390311 390973 . + . ID=gene-AL55_RS0104200;Name=AL55_RS0104200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104200;old_locus_tag=AL55_00339 NZ_KK316828.1 Protein Homology CDS 390311 390973 . + 0 ID=cds-WP_003900903.1;Parent=gene-AL55_RS0104200;Dbxref=GenBank:WP_003900903.1;Name=WP_003900903.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900903.1;locus_tag=AL55_RS0104200;product=class I SAM-dependent methyltransferase;protein_id=WP_003900903.1;transl_table=11 NZ_KK316828.1 RefSeq gene 390941 392290 . - . ID=gene-AL55_RS07440;Name=AL55_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07440;old_locus_tag=AL55_00340 NZ_KK316828.1 Protein Homology CDS 390941 392290 . - 0 ID=cds-WP_003401650.1;Parent=gene-AL55_RS07440;Dbxref=GenBank:WP_003401650.1;Name=WP_003401650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214841.1;locus_tag=AL55_RS07440;product=cytochrome P450;protein_id=WP_003401650.1;transl_table=11 NZ_KK316828.1 RefSeq gene 392356 392958 . + . ID=gene-AL55_RS07445;Name=AL55_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07445;old_locus_tag=AL55_00341 NZ_KK316828.1 Protein Homology CDS 392356 392958 . + 0 ID=cds-WP_003401651.1;Parent=gene-AL55_RS07445;Dbxref=GenBank:WP_003401651.1;Name=WP_003401651.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214842.1;locus_tag=AL55_RS07445;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401651.1;transl_table=11 NZ_KK316828.1 RefSeq gene 392939 393565 . - . ID=gene-AL55_RS07450;Name=AL55_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07450;old_locus_tag=AL55_00342 NZ_KK316828.1 Protein Homology CDS 392939 393565 . - 0 ID=cds-WP_003401654.1;Parent=gene-AL55_RS07450;Dbxref=GenBank:WP_003401654.1;Name=WP_003401654.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214843.1;locus_tag=AL55_RS07450;product=class I SAM-dependent methyltransferase;protein_id=WP_003401654.1;transl_table=11 NZ_KK316828.1 RefSeq gene 393592 394332 . - . ID=gene-AL55_RS07455;Name=AL55_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07455;old_locus_tag=AL55_00343 NZ_KK316828.1 Protein Homology CDS 393592 394332 . - 0 ID=cds-WP_003401656.1;Parent=gene-AL55_RS07455;Dbxref=GenBank:WP_003401656.1;Name=WP_003401656.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214844.1;locus_tag=AL55_RS07455;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401656.1;transl_table=11 NZ_KK316828.1 RefSeq gene 394446 395612 . + . ID=gene-AL55_RS07460;Name=AL55_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07460;old_locus_tag=AL55_00344 NZ_KK316828.1 Protein Homology CDS 394446 395612 . + 0 ID=cds-WP_003900904.1;Parent=gene-AL55_RS07460;Dbxref=GenBank:WP_003900904.1;Name=WP_003900904.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214845.1;locus_tag=AL55_RS07460;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003900904.1;transl_table=11 NZ_KK316828.1 RefSeq gene 395717 396472 . + . ID=gene-AL55_RS07465;Name=AL55_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07465;old_locus_tag=AL55_00345 NZ_KK316828.1 Protein Homology CDS 395717 396472 . + 0 ID=cds-WP_003911158.1;Parent=gene-AL55_RS07465;Dbxref=GenBank:WP_003911158.1;Name=WP_003911158.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302514.1;locus_tag=AL55_RS07465;product=maleylpyruvate isomerase family mycothiol-dependent enzyme;protein_id=WP_003911158.1;transl_table=11 NZ_KK316828.1 RefSeq gene 396499 396873 . + . ID=gene-AL55_RS07470;Name=AL55_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07470;old_locus_tag=AL55_00346 NZ_KK316828.1 Protein Homology CDS 396499 396873 . + 0 ID=cds-WP_003401666.1;Parent=gene-AL55_RS07470;Dbxref=GenBank:WP_003401666.1;Name=WP_003401666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214847.1;locus_tag=AL55_RS07470;product=nuclear transport factor 2 family protein;protein_id=WP_003401666.1;transl_table=11 NZ_KK316828.1 RefSeq gene 396903 397769 . + . ID=gene-AL55_RS07475;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AL55_RS07475;old_locus_tag=AL55_00347 NZ_KK316828.1 Protein Homology CDS 396903 397769 . + 0 ID=cds-WP_003401670.1;Parent=gene-AL55_RS07475;Dbxref=GenBank:WP_003401670.1;Name=WP_003401670.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214848.1;locus_tag=AL55_RS07475;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_003401670.1;transl_table=11 NZ_KK316828.1 RefSeq gene 397780 398232 . - . ID=gene-AL55_RS27910;Name=AL55_RS27910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27910;old_locus_tag=AL55_00348 NZ_KK316828.1 Protein Homology CDS 397780 398232 . - 0 ID=cds-WP_003911159.1;Parent=gene-AL55_RS27910;Dbxref=GenBank:WP_003911159.1;Name=WP_003911159.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL55_RS27910;product=PE family protein PE6;protein_id=WP_003911159.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 398182 398299 . + . ID=gene-AL55_RS28150;Name=AL55_RS28150;end_range=398299,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28150;partial=true;pseudo=true;start_range=.,398182 NZ_KK316828.1 Protein Homology CDS 398182 398299 . + 0 ID=cds-AL55_RS28150;Parent=gene-AL55_RS28150;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=398299,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=AL55_RS28150;partial=true;product=hypothetical protein;pseudo=true;start_range=.,398182;transl_table=11 NZ_KK316828.1 RefSeq gene 398413 399948 . + . ID=gene-AL55_RS07480;Name=AL55_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07480;old_locus_tag=AL55_00349 NZ_KK316828.1 Protein Homology CDS 398413 399948 . + 0 ID=cds-WP_009940213.1;Parent=gene-AL55_RS07480;Dbxref=GenBank:WP_009940213.1;Name=WP_009940213.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287795.1;locus_tag=AL55_RS07480;product=HNH endonuclease signature motif containing protein;protein_id=WP_009940213.1;transl_table=11 NZ_KK316828.1 RefSeq gene 400118 401407 . - . ID=gene-AL55_RS07485;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=AL55_RS07485;old_locus_tag=AL55_00350 NZ_KK316828.1 Protein Homology CDS 400118 401407 . - 0 ID=cds-WP_003401733.1;Parent=gene-AL55_RS07485;Dbxref=GenBank:WP_003401733.1;Name=WP_003401733.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=aspC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214851.1;locus_tag=AL55_RS07485;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_003401733.1;transl_table=11 NZ_KK316828.1 RefSeq gene 401438 404086 . - . ID=gene-AL55_RS07490;Name=AL55_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07490;old_locus_tag=AL55_00351 NZ_KK316828.1 Protein Homology CDS 401438 404086 . - 0 ID=cds-WP_003401734.1;Parent=gene-AL55_RS07490;Dbxref=GenBank:WP_003401734.1;Name=WP_003401734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214852.1;locus_tag=AL55_RS07490;product=(Fe-S)-binding protein;protein_id=WP_003401734.1;transl_table=11 NZ_KK316828.1 RefSeq gene 404195 406693 . - . ID=gene-AL55_RS07495;Name=iniR;gbkey=Gene;gene=iniR;gene_biotype=protein_coding;locus_tag=AL55_RS07495;old_locus_tag=AL55_00352 NZ_KK316828.1 Protein Homology CDS 404195 406693 . - 0 ID=cds-WP_003401735.1;Parent=gene-AL55_RS07495;Dbxref=GenBank:WP_003401735.1;Name=WP_003401735.1;gbkey=CDS;gene=iniR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214853.1;locus_tag=AL55_RS07495;product=isoniazid response ATPase/transcriptional regulator IniR;protein_id=WP_003401735.1;transl_table=11 NZ_KK316828.1 RefSeq gene 406879 407418 . + . ID=gene-AL55_RS07500;Name=AL55_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07500;old_locus_tag=AL55_00353 NZ_KK316828.1 Protein Homology CDS 406879 407418 . + 0 ID=cds-WP_003401737.1;Parent=gene-AL55_RS07500;Dbxref=GenBank:WP_003401737.1;Name=WP_003401737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214854.1;locus_tag=AL55_RS07500;product=Rv0340 family IniB-related protein;protein_id=WP_003401737.1;transl_table=11 NZ_KK316828.1 RefSeq gene 407607 409046 . + . ID=gene-AL55_RS07505;Name=iniB;gbkey=Gene;gene=iniB;gene_biotype=protein_coding;locus_tag=AL55_RS07505;old_locus_tag=AL55_00354 NZ_KK316828.1 Protein Homology CDS 407607 409046 . + 0 ID=cds-WP_003901837.1;Parent=gene-AL55_RS07505;Dbxref=GenBank:WP_003901837.1;Name=WP_003901837.1;gbkey=CDS;gene=iniB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214855.1;locus_tag=AL55_RS07505;product=isoniazid-induced protein IniB;protein_id=WP_003901837.1;transl_table=11 NZ_KK316828.1 RefSeq gene 409152 411005 . + . ID=gene-AL55_RS07510;Name=iniA;gbkey=Gene;gene=iniA;gene_biotype=protein_coding;locus_tag=AL55_RS07510;old_locus_tag=AL55_00355 NZ_KK316828.1 Protein Homology CDS 409152 411005 . + 0 ID=cds-WP_003911164.1;Parent=gene-AL55_RS07510;Dbxref=GenBank:WP_003911164.1;Name=WP_003911164.1;gbkey=CDS;gene=iniA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292084.1;locus_tag=AL55_RS07510;product=isoniazid-induced dynamin-like GTPase IniA;protein_id=WP_003911164.1;transl_table=11 NZ_KK316828.1 RefSeq gene 411002 412483 . + . ID=gene-AL55_RS07515;Name=iniC;gbkey=Gene;gene=iniC;gene_biotype=protein_coding;locus_tag=AL55_RS07515;old_locus_tag=AL55_00356 NZ_KK316828.1 Protein Homology CDS 411002 412483 . + 0 ID=cds-WP_003401747.1;Parent=gene-AL55_RS07515;Dbxref=GenBank:WP_003401747.1;Name=WP_003401747.1;gbkey=CDS;gene=iniC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214857.1;locus_tag=AL55_RS07515;product=isoniazid-induced dynamin-like GTPase IniC;protein_id=WP_003401747.1;transl_table=11 NZ_KK316828.1 RefSeq gene 412626 413186 . - . ID=gene-AL55_RS07520;Name=AL55_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07520;old_locus_tag=AL55_00357 NZ_KK316828.1 Protein Homology CDS 412626 413186 . - 0 ID=cds-WP_003401751.1;Parent=gene-AL55_RS07520;Dbxref=GenBank:WP_003401751.1;Name=WP_003401751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214858.1;locus_tag=AL55_RS07520;product=hypothetical protein;protein_id=WP_003401751.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 413289 413853 . + . ID=gene-AL55_RS07525;Name=AL55_RS07525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS07525;old_locus_tag=AL55_00358;pseudo=true NZ_KK316828.1 Protein Homology CDS 413289 413853 . + 0 ID=cds-AL55_RS07525;Parent=gene-AL55_RS07525;Note=frameshifted;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007167464.1;locus_tag=AL55_RS07525;product=nucleotidyltransferase family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 413747 415210 . - . ID=gene-AL55_RS07530;Name=AL55_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07530;old_locus_tag=AL55_00359 NZ_KK316828.1 Protein Homology CDS 413747 415210 . - 0 ID=cds-WP_003898409.1;Parent=gene-AL55_RS07530;Dbxref=GenBank:WP_003898409.1;Name=WP_003898409.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177718.1;locus_tag=AL55_RS07530;product=amino acid permease;protein_id=WP_003898409.1;transl_table=11 NZ_KK316828.1 RefSeq gene 415723 416535 . + . ID=gene-AL55_RS07535;Name=AL55_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07535;old_locus_tag=AL55_00360 NZ_KK316828.1 Protein Homology CDS 415723 416535 . + 0 ID=cds-WP_003911187.1;Parent=gene-AL55_RS07535;Dbxref=GenBank:WP_003911187.1;Name=WP_003911187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911187.1;locus_tag=AL55_RS07535;product=TIGR04255 family protein;protein_id=WP_003911187.1;transl_table=11 NZ_KK316828.1 RefSeq gene 416538 417191 . + . ID=gene-AL55_RS07540;Name=mosR;gbkey=Gene;gene=mosR;gene_biotype=protein_coding;locus_tag=AL55_RS07540;old_locus_tag=AL55_00361 NZ_KK316828.1 Protein Homology CDS 416538 417191 . + 0 ID=cds-WP_003401756.1;Parent=gene-AL55_RS07540;Dbxref=GenBank:WP_003401756.1;Name=WP_003401756.1;gbkey=CDS;gene=mosR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214862.1;locus_tag=AL55_RS07540;product=hypoxia/intracellular survival transcriptional regulator MosR;protein_id=WP_003401756.1;transl_table=11 NZ_KK316828.1 RefSeq gene 417146 417364 . - . ID=gene-AL55_RS27525;Name=AL55_RS27525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27525 NZ_KK316828.1 Protein Homology CDS 417146 417364 . - 0 ID=cds-WP_003918061.1;Parent=gene-AL55_RS27525;Dbxref=GenBank:WP_003918061.1;Name=WP_003918061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918061.1;locus_tag=AL55_RS27525;product=hypothetical protein;protein_id=WP_003918061.1;transl_table=11 NZ_KK316828.1 RefSeq gene 417311 417853 . + . ID=gene-AL55_RS07545;Name=AL55_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07545;old_locus_tag=AL55_00362 NZ_KK316828.1 Protein Homology CDS 417311 417853 . + 0 ID=cds-WP_003401808.1;Parent=gene-AL55_RS07545;Dbxref=GenBank:WP_003401808.1;Name=WP_003401808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401808.1;locus_tag=AL55_RS07545;product=hypothetical protein;protein_id=WP_003401808.1;transl_table=11 NZ_KK316828.1 RefSeq gene 418080 419957 . + . ID=gene-AL55_RS07550;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AL55_RS07550;old_locus_tag=AL55_00363 NZ_KK316828.1 Protein Homology CDS 418080 419957 . + 0 ID=cds-WP_003401814.1;Parent=gene-AL55_RS07550;Dbxref=GenBank:WP_003401814.1;Name=WP_003401814.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214864.1;locus_tag=AL55_RS07550;product=molecular chaperone DnaK;protein_id=WP_003401814.1;transl_table=11 NZ_KK316828.1 RefSeq gene 419954 420661 . + . ID=gene-AL55_RS07555;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AL55_RS07555;old_locus_tag=AL55_00364 NZ_KK316828.1 Protein Homology CDS 419954 420661 . + 0 ID=cds-WP_003401817.1;Parent=gene-AL55_RS07555;Dbxref=GenBank:WP_003401817.1;Name=WP_003401817.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214865.1;locus_tag=AL55_RS07555;product=nucleotide exchange factor GrpE;protein_id=WP_003401817.1;transl_table=11 NZ_KK316828.1 RefSeq gene 420697 421884 . + . ID=gene-AL55_RS07560;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AL55_RS07560;old_locus_tag=AL55_00365 NZ_KK316828.1 Protein Homology CDS 420697 421884 . + 0 ID=cds-WP_003401821.1;Parent=gene-AL55_RS07560;Dbxref=GenBank:WP_003401821.1;Name=WP_003401821.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177719.1;locus_tag=AL55_RS07560;product=molecular chaperone DnaJ;protein_id=WP_003401821.1;transl_table=11 NZ_KK316828.1 RefSeq gene 421884 422264 . + . ID=gene-AL55_RS07565;Name=hspR;gbkey=Gene;gene=hspR;gene_biotype=protein_coding;locus_tag=AL55_RS07565;old_locus_tag=AL55_00366 NZ_KK316828.1 Protein Homology CDS 421884 422264 . + 0 ID=cds-WP_003401823.1;Parent=gene-AL55_RS07565;Dbxref=GenBank:WP_003401823.1;Name=WP_003401823.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hspR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214867.1;locus_tag=AL55_RS07565;product=heat shock protein transcriptional repressor HspR;protein_id=WP_003401823.1;transl_table=11 NZ_KK316828.1 RefSeq gene 422440 422991 . - . ID=gene-AL55_RS26850;Name=AL55_RS26850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26850;old_locus_tag=AL55_00367 NZ_KK316828.1 GeneMarkS-2+ CDS 422440 422991 . - 0 ID=cds-WP_003898412.1;Parent=gene-AL55_RS26850;Dbxref=GenBank:WP_003898412.1;Name=WP_003898412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS26850;product=hypothetical protein;protein_id=WP_003898412.1;transl_table=11 NZ_KK316828.1 RefSeq gene 423074 432745 . - . ID=gene-AL55_RS07575;Name=AL55_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07575;old_locus_tag=AL55_00368 NZ_KK316828.1 Protein Homology CDS 423074 432745 . - 0 ID=cds-WP_031708992.1;Parent=gene-AL55_RS07575;Dbxref=GenBank:WP_031708992.1;Name=WP_031708992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177721.2;locus_tag=AL55_RS07575;product=PPE family protein;protein_id=WP_031708992.1;transl_table=11 NZ_KK316828.1 RefSeq gene 432896 433540 . - . ID=gene-AL55_RS07580;Name=AL55_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07580;old_locus_tag=AL55_00369 NZ_KK316828.1 Protein Homology CDS 432896 433540 . - 0 ID=cds-WP_003401827.1;Parent=gene-AL55_RS07580;Dbxref=GenBank:WP_003401827.1;Name=WP_003401827.1;Ontology_term=GO:0016790,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214870.1;locus_tag=AL55_RS07580;product=PaaI family thioesterase;protein_id=WP_003401827.1;transl_table=11 NZ_KK316828.1 RefSeq gene 433537 434835 . - . ID=gene-AL55_RS07585;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=AL55_RS07585;old_locus_tag=AL55_00370 NZ_KK316828.1 Protein Homology CDS 433537 434835 . - 0 ID=cds-WP_003401829.1;Parent=gene-AL55_RS07585;Dbxref=GenBank:WP_003401829.1;Name=WP_003401829.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214871.1;locus_tag=AL55_RS07585;product=adenylosuccinate synthase;protein_id=WP_003401829.1;transl_table=11 NZ_KK316828.1 RefSeq gene 434926 435573 . + . ID=gene-AL55_RS07590;Name=AL55_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07590;old_locus_tag=AL55_00371 NZ_KK316828.1 Protein Homology CDS 434926 435573 . + 0 ID=cds-WP_003401831.1;Parent=gene-AL55_RS07590;Dbxref=GenBank:WP_003401831.1;Name=WP_003401831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214872.1;locus_tag=AL55_RS07590;product=hypothetical protein;protein_id=WP_003401831.1;transl_table=11 NZ_KK316828.1 RefSeq gene 435584 436363 . + . ID=gene-AL55_RS07595;Name=AL55_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07595;old_locus_tag=AL55_00372 NZ_KK316828.1 Protein Homology CDS 435584 436363 . + 0 ID=cds-WP_003898413.1;Parent=gene-AL55_RS07595;Dbxref=GenBank:WP_003898413.1;Name=WP_003898413.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214873.1;locus_tag=AL55_RS07595;product=site-2 protease family protein;protein_id=WP_003898413.1;transl_table=11 NZ_KK316828.1 RefSeq gene 436368 436781 . - . ID=gene-AL55_RS07600;Name=AL55_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07600;old_locus_tag=AL55_00373 NZ_KK316828.1 Protein Homology CDS 436368 436781 . - 0 ID=cds-WP_003401852.1;Parent=gene-AL55_RS07600;Dbxref=GenBank:WP_003401852.1;Name=WP_003401852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011726247.1;locus_tag=AL55_RS07600;product=DUF3151 domain-containing protein;protein_id=WP_003401852.1;transl_table=11 NZ_KK316828.1 RefSeq gene 436888 437715 . + . ID=gene-AL55_RS07605;Name=AL55_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07605;old_locus_tag=AL55_00374 NZ_KK316828.1 Protein Homology CDS 436888 437715 . + 0 ID=cds-WP_003401853.1;Parent=gene-AL55_RS07605;Dbxref=GenBank:WP_003401853.1;Name=WP_003401853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214875.1;locus_tag=AL55_RS07605;product=Rv0361 family membrane protein;protein_id=WP_003401853.1;transl_table=11 NZ_KK316828.1 RefSeq gene 437937 439319 . + . ID=gene-AL55_RS07610;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=AL55_RS07610;old_locus_tag=AL55_00375 NZ_KK316828.1 Protein Homology CDS 437937 439319 . + 0 ID=cds-WP_003898415.1;Parent=gene-AL55_RS07610;Dbxref=GenBank:WP_003898415.1;Name=WP_003898415.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214876.1;locus_tag=AL55_RS07610;product=magnesium transporter;protein_id=WP_003898415.1;transl_table=11 NZ_KK316828.1 RefSeq gene 439331 440365 . - . ID=gene-AL55_RS07615;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=AL55_RS07615;old_locus_tag=AL55_00376 NZ_KK316828.1 Protein Homology CDS 439331 440365 . - 0 ID=cds-WP_003401856.1;Parent=gene-AL55_RS07615;Dbxref=GenBank:WP_003401856.1;Name=WP_003401856.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214877.1;locus_tag=AL55_RS07615;product=class II fructose-bisphosphate aldolase;protein_id=WP_003401856.1;transl_table=11 NZ_KK316828.1 RefSeq gene 440461 441144 . + . ID=gene-AL55_RS07620;Name=AL55_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07620;old_locus_tag=AL55_00377 NZ_KK316828.1 Protein Homology CDS 440461 441144 . + 0 ID=cds-WP_003401857.1;Parent=gene-AL55_RS07620;Dbxref=GenBank:WP_003401857.1;Name=WP_003401857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214878.1;locus_tag=AL55_RS07620;product=VTT domain-containing protein;protein_id=WP_003401857.1;transl_table=11 NZ_KK316828.1 RefSeq gene 441133 442263 . - . ID=gene-AL55_RS07625;Name=AL55_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07625;old_locus_tag=AL55_00378 NZ_KK316828.1 Protein Homology CDS 441133 442263 . - 0 ID=cds-WP_003401858.1;Parent=gene-AL55_RS07625;Dbxref=GenBank:WP_003401858.1;Name=WP_003401858.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214879.1;locus_tag=AL55_RS07625;product=glycoside hydrolase family 76 protein;protein_id=WP_003401858.1;transl_table=11 NZ_KK316828.1 RefSeq gene 442288 442881 . - . ID=gene-AL55_RS07630;Name=AL55_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07630;old_locus_tag=AL55_00379 NZ_KK316828.1 Protein Homology CDS 442288 442881 . - 0 ID=cds-WP_003401859.1;Parent=gene-AL55_RS07630;Dbxref=GenBank:WP_003401859.1;Name=WP_003401859.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214880.1;locus_tag=AL55_RS07630;product=ATPase;protein_id=WP_003401859.1;transl_table=11 NZ_KK316828.1 RefSeq gene 442910 443299 . - . ID=gene-AL55_RS07635;Name=AL55_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07635;old_locus_tag=AL55_00380 NZ_KK316828.1 Protein Homology CDS 442910 443299 . - 0 ID=cds-WP_003401860.1;Parent=gene-AL55_RS07635;Dbxref=GenBank:WP_003401860.1;Name=WP_003401860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214881.1;locus_tag=AL55_RS07635;product=TA system antitoxin ParD family protein;protein_id=WP_003401860.1;transl_table=11 NZ_KK316828.1 RefSeq gene 443380 444591 . - . ID=gene-AL55_RS07640;Name=AL55_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07640;old_locus_tag=AL55_00381 NZ_KK316828.1 Protein Homology CDS 443380 444591 . - 0 ID=cds-WP_003401861.1;Parent=gene-AL55_RS07640;Dbxref=GenBank:WP_003401861.1;Name=WP_003401861.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214882.1;locus_tag=AL55_RS07640;product=vWA domain-containing protein;protein_id=WP_003401861.1;transl_table=11 NZ_KK316828.1 RefSeq gene 444597 445199 . - . ID=gene-AL55_RS07645;Name=AL55_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07645;old_locus_tag=AL55_00382 NZ_KK316828.1 Protein Homology CDS 444597 445199 . - 0 ID=cds-WP_003898417.1;Parent=gene-AL55_RS07645;Dbxref=GenBank:WP_003898417.1;Name=WP_003898417.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898417.1;locus_tag=AL55_RS07645;product=SRPBCC family protein;protein_id=WP_003898417.1;transl_table=11 NZ_KK316828.1 RefSeq gene 445213 446109 . - . ID=gene-AL55_RS07650;Name=AL55_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07650;old_locus_tag=AL55_00383 NZ_KK316828.1 Protein Homology CDS 445213 446109 . - 0 ID=cds-WP_003898418.1;Parent=gene-AL55_RS07650;Dbxref=GenBank:WP_003898418.1;Name=WP_003898418.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214884.1;locus_tag=AL55_RS07650;product=AAA family ATPase;protein_id=WP_003898418.1;transl_table=11 NZ_KK316828.1 RefSeq gene 446106 446699 . - . ID=gene-AL55_RS07655;Name=AL55_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07655;old_locus_tag=AL55_00384 NZ_KK316828.1 Protein Homology CDS 446106 446699 . - 0 ID=cds-WP_003401864.1;Parent=gene-AL55_RS07655;Dbxref=GenBank:WP_003401864.1;Name=WP_003401864.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214885.1;locus_tag=AL55_RS07655;product=nucleotidyltransferase family protein;protein_id=WP_003401864.1;transl_table=11 NZ_KK316828.1 RefSeq gene 446696 447451 . - . ID=gene-AL55_RS07660;Name=AL55_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07660;old_locus_tag=AL55_00385 NZ_KK316828.1 Protein Homology CDS 446696 447451 . - 0 ID=cds-WP_003401865.1;Parent=gene-AL55_RS07660;Dbxref=GenBank:WP_003401865.1;Name=WP_003401865.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214886.1;locus_tag=AL55_RS07660;product=XdhC family protein;protein_id=WP_003401865.1;transl_table=11 NZ_KK316828.1 RefSeq gene 447470 449869 . - . ID=gene-AL55_RS07665;Name=AL55_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07665;old_locus_tag=AL55_00386 NZ_KK316828.1 Protein Homology CDS 447470 449869 . - 0 ID=cds-WP_003900133.1;Parent=gene-AL55_RS07665;Dbxref=GenBank:WP_003900133.1;Name=WP_003900133.1;Ontology_term=GO:0005507,GO:0030151,GO:0043885;gbkey=CDS;go_function=copper ion binding|0005507||IEA,molybdenum ion binding|0030151||IEA,anaerobic carbon-monoxide dehydrogenase activity|0043885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214887.1;locus_tag=AL55_RS07665;product=aerobic carbon-monoxide dehydrogenase large subunit;protein_id=WP_003900133.1;transl_table=11 NZ_KK316828.1 RefSeq gene 449866 450345 . - . ID=gene-AL55_RS07670;Name=AL55_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07670;old_locus_tag=AL55_00387 NZ_KK316828.1 Protein Homology CDS 449866 450345 . - 0 ID=cds-WP_003401867.1;Parent=gene-AL55_RS07670;Dbxref=GenBank:WP_003401867.1;Name=WP_003401867.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214888.1;locus_tag=AL55_RS07670;product=(2Fe-2S)-binding protein;protein_id=WP_003401867.1;transl_table=11 NZ_KK316828.1 RefSeq gene 450360 451262 . - . ID=gene-AL55_RS07675;Name=AL55_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07675;old_locus_tag=AL55_00388 NZ_KK316828.1 Protein Homology CDS 450360 451262 . - 0 ID=cds-WP_003898419.1;Parent=gene-AL55_RS07675;Dbxref=GenBank:WP_003898419.1;Name=WP_003898419.1;Ontology_term=GO:0050660,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898419.1;locus_tag=AL55_RS07675;product=FAD binding domain-containing protein;protein_id=WP_003898419.1;transl_table=11 NZ_KK316828.1 RefSeq gene 451296 452462 . - . ID=gene-AL55_RS07680;Name=AL55_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07680;old_locus_tag=AL55_00389 NZ_KK316828.1 Protein Homology CDS 451296 452462 . - 0 ID=cds-WP_003918064.1;Parent=gene-AL55_RS07680;Dbxref=GenBank:WP_003918064.1;Name=WP_003918064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918064.1;locus_tag=AL55_RS07680;product=XdhC family protein;protein_id=WP_003918064.1;transl_table=11 NZ_KK316828.1 RefSeq gene 452487 453452 . + . ID=gene-AL55_RS07685;Name=AL55_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07685;old_locus_tag=AL55_00390 NZ_KK316828.1 Protein Homology CDS 452487 453452 . + 0 ID=cds-WP_003898421.1;Parent=gene-AL55_RS07685;Dbxref=GenBank:WP_003898421.1;Name=WP_003898421.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214891.1;locus_tag=AL55_RS07685;product=LysR family transcriptional regulator;protein_id=WP_003898421.1;transl_table=11 NZ_KK316828.1 RefSeq gene 453703 453924 . + . ID=gene-AL55_RS07690;Name=AL55_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07690;old_locus_tag=AL55_00391 NZ_KK316828.1 GeneMarkS-2+ CDS 453703 453924 . + 0 ID=cds-WP_003401880.1;Parent=gene-AL55_RS07690;Dbxref=GenBank:WP_003401880.1;Name=WP_003401880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS07690;product=hypothetical protein;protein_id=WP_003401880.1;transl_table=11 NZ_KK316828.1 RefSeq gene 454043 454258 . + . ID=gene-AL55_RS07695;Name=secE2;gbkey=Gene;gene=secE2;gene_biotype=protein_coding;locus_tag=AL55_RS07695;old_locus_tag=AL55_00392 NZ_KK316828.1 Protein Homology CDS 454043 454258 . + 0 ID=cds-WP_003401885.1;Parent=gene-AL55_RS07695;Dbxref=GenBank:WP_003401885.1;Name=WP_003401885.1;gbkey=CDS;gene=secE2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177722.1;locus_tag=AL55_RS07695;product=calcium dodecin;protein_id=WP_003401885.1;transl_table=11 NZ_KK316828.1 RefSeq gene 454334 454984 . - . ID=gene-AL55_RS07700;Name=AL55_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07700;old_locus_tag=AL55_00393 NZ_KK316828.1 Protein Homology CDS 454334 454984 . - 0 ID=cds-WP_029398175.1;Parent=gene-AL55_RS07700;Dbxref=GenBank:WP_029398175.1;Name=WP_029398175.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900914.1;locus_tag=AL55_RS07700;product=TrmH family RNA methyltransferase;protein_id=WP_029398175.1;transl_table=11 NZ_KK316828.1 RefSeq gene 454981 455889 . - . ID=gene-AL55_RS07705;Name=AL55_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07705;old_locus_tag=AL55_00394 NZ_KK316828.1 Protein Homology CDS 454981 455889 . - 0 ID=cds-WP_003401890.1;Parent=gene-AL55_RS07705;Dbxref=GenBank:WP_003401890.1;Name=WP_003401890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214895.1;locus_tag=AL55_RS07705;product=hypothetical protein;protein_id=WP_003401890.1;transl_table=11 NZ_KK316828.1 RefSeq gene 455907 456446 . - . ID=gene-AL55_RS07710;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AL55_RS07710;old_locus_tag=AL55_00395 NZ_KK316828.1 Protein Homology CDS 455907 456446 . - 0 ID=cds-WP_003401894.1;Parent=gene-AL55_RS07710;Dbxref=GenBank:WP_003401894.1;Name=WP_003401894.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177723.1;locus_tag=AL55_RS07710;product=orotate phosphoribosyltransferase;protein_id=WP_003401894.1;transl_table=11 NZ_KK316828.1 RefSeq gene 456527 457381 . - . ID=gene-AL55_RS07715;Name=ttfA;gbkey=Gene;gene=ttfA;gene_biotype=protein_coding;locus_tag=AL55_RS07715;old_locus_tag=AL55_00396 NZ_KK316828.1 Protein Homology CDS 456527 457381 . - 0 ID=cds-WP_003401897.1;Parent=gene-AL55_RS07715;Dbxref=GenBank:WP_003401897.1;Name=WP_003401897.1;Ontology_term=GO:0071555;gbkey=CDS;gene=ttfA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214897.1;locus_tag=AL55_RS07715;product=trehalose monomycolate transport factor TtfA;protein_id=WP_003401897.1;transl_table=11 NZ_KK316828.1 RefSeq gene 457522 460068 . - . ID=gene-AL55_RS07720;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AL55_RS07720;old_locus_tag=AL55_00397 NZ_KK316828.1 Protein Homology CDS 457522 460068 . - 0 ID=cds-WP_003401905.1;Parent=gene-AL55_RS07720;Dbxref=GenBank:WP_003401905.1;Name=WP_003401905.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401905.1;locus_tag=AL55_RS07720;product=ATP-dependent chaperone ClpB;protein_id=WP_003401905.1;transl_table=11 NZ_KK316828.1 RefSeq gene 460201 461373 . + . ID=gene-AL55_RS07725;Name=AL55_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07725;old_locus_tag=AL55_00398 NZ_KK316828.1 Protein Homology CDS 460201 461373 . + 0 ID=cds-WP_003401910.1;Parent=gene-AL55_RS07725;Dbxref=GenBank:WP_003401910.1;Name=WP_003401910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214899.1;locus_tag=AL55_RS07725;product=FAD-binding oxidoreductase;protein_id=WP_003401910.1;transl_table=11 NZ_KK316828.1 RefSeq gene 461477 464734 . + . ID=gene-AL55_RS07730;Name=AL55_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07730;old_locus_tag=AL55_00399 NZ_KK316828.1 Protein Homology CDS 461477 464734 . + 0 ID=cds-WP_003401912.1;Parent=gene-AL55_RS07730;Dbxref=GenBank:WP_003401912.1;Name=WP_003401912.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214900.1;locus_tag=AL55_RS07730;product=helix-turn-helix transcriptional regulator;protein_id=WP_003401912.1;transl_table=11 NZ_KK316828.1 RefSeq gene 464738 466069 . - . ID=gene-AL55_RS07735;Name=AL55_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07735;old_locus_tag=AL55_00400 NZ_KK316828.1 Protein Homology CDS 464738 466069 . - 0 ID=cds-WP_003401914.1;Parent=gene-AL55_RS07735;Dbxref=GenBank:WP_003401914.1;Name=WP_003401914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287807.1;locus_tag=AL55_RS07735;product=PPE family protein;protein_id=WP_003401914.1;transl_table=11 NZ_KK316828.1 RefSeq gene 466403 467662 . + . ID=gene-AL55_RS07740;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AL55_RS07740;old_locus_tag=AL55_00401 NZ_KK316828.1 Protein Homology CDS 466403 467662 . + 0 ID=cds-WP_003898427.1;Parent=gene-AL55_RS07740;Dbxref=GenBank:WP_003898427.1;Name=WP_003898427.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524,GO:0016742;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA,hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214903.1;locus_tag=AL55_RS07740;product=phosphoribosylglycinamide formyltransferase 2;protein_id=WP_003898427.1;transl_table=11 NZ_KK316828.1 RefSeq gene 467659 468081 . + . ID=gene-AL55_RS07745;Name=AL55_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07745;old_locus_tag=AL55_00402 NZ_KK316828.1 Protein Homology CDS 467659 468081 . + 0 ID=cds-WP_003401921.1;Parent=gene-AL55_RS07745;Dbxref=GenBank:WP_003401921.1;Name=WP_003401921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214904.1;locus_tag=AL55_RS07745;product=rhodanese-like domain-containing protein;protein_id=WP_003401921.1;transl_table=11 NZ_KK316828.1 RefSeq gene 468078 469298 . + . ID=gene-AL55_RS07750;Name=metZ;gbkey=Gene;gene=metZ;gene_biotype=protein_coding;locus_tag=AL55_RS07750;old_locus_tag=AL55_00403 NZ_KK316828.1 Protein Homology CDS 468078 469298 . + 0 ID=cds-WP_003401927.1;Parent=gene-AL55_RS07750;Dbxref=GenBank:WP_003401927.1;Name=WP_003401927.1;gbkey=CDS;gene=metZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214905.1;locus_tag=AL55_RS07750;product=O-succinylhomoserine sulfhydrylase;protein_id=WP_003401927.1;transl_table=11 NZ_KK316828.1 RefSeq gene 469295 470707 . - . ID=gene-AL55_RS07755;Name=ndhA;gbkey=Gene;gene=ndhA;gene_biotype=protein_coding;locus_tag=AL55_RS07755;old_locus_tag=AL55_00404 NZ_KK316828.1 Protein Homology CDS 469295 470707 . - 0 ID=cds-WP_003898428.1;Parent=gene-AL55_RS07755;Dbxref=GenBank:WP_003898428.1;Name=WP_003898428.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;gene=ndhA;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214906.1;locus_tag=AL55_RS07755;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003898428.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 470982 472174 . + . ID=gene-AL55_RS07760;Name=AL55_RS07760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS07760;old_locus_tag=AL55_00405;pseudo=true NZ_KK316828.1 Protein Homology CDS 470982 472174 . + 0 ID=cds-AL55_RS07760;Parent=gene-AL55_RS07760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014741.6;locus_tag=AL55_RS07760;product=DUF222 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 472190 472909 . - . ID=gene-AL55_RS07765;Name=AL55_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07765;old_locus_tag=AL55_00406 NZ_KK316828.1 Protein Homology CDS 472190 472909 . - 0 ID=cds-WP_003401942.1;Parent=gene-AL55_RS07765;Dbxref=GenBank:WP_003401942.1;Name=WP_003401942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214908.1;locus_tag=AL55_RS07765;product=hyaluronidase/chondrosulfatase;protein_id=WP_003401942.1;transl_table=11 NZ_KK316828.1 RefSeq gene 473008 473412 . + . ID=gene-AL55_RS07770;Name=AL55_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07770;old_locus_tag=AL55_00407 NZ_KK316828.1 Protein Homology CDS 473008 473412 . + 0 ID=cds-WP_003401944.1;Parent=gene-AL55_RS07770;Dbxref=GenBank:WP_003401944.1;Name=WP_003401944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214909.1;locus_tag=AL55_RS07770;product=hypothetical protein;protein_id=WP_003401944.1;transl_table=11 NZ_KK316828.1 RefSeq gene 473418 473810 . + . ID=gene-AL55_RS07775;Name=AL55_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07775;old_locus_tag=AL55_00408 NZ_KK316828.1 Protein Homology CDS 473418 473810 . + 0 ID=cds-WP_003401950.1;Parent=gene-AL55_RS07775;Dbxref=GenBank:WP_003401950.1;Name=WP_003401950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214910.1;locus_tag=AL55_RS07775;product=hypothetical protein;protein_id=WP_003401950.1;transl_table=11 NZ_KK316828.1 RefSeq gene 473884 474252 . + . ID=gene-AL55_RS07780;Name=AL55_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07780;old_locus_tag=AL55_00409 NZ_KK316828.1 Protein Homology CDS 473884 474252 . + 0 ID=cds-WP_003401960.1;Parent=gene-AL55_RS07780;Dbxref=GenBank:WP_003401960.1;Name=WP_003401960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014712350.1;locus_tag=AL55_RS07780;product=hypothetical protein;protein_id=WP_003401960.1;transl_table=11 NZ_KK316828.1 RefSeq gene 474462 474710 . + . ID=gene-AL55_RS07785;Name=AL55_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07785;old_locus_tag=AL55_00410 NZ_KK316828.1 Protein Homology CDS 474462 474710 . + 0 ID=cds-WP_003898430.1;Parent=gene-AL55_RS07785;Dbxref=GenBank:WP_003898430.1;Name=WP_003898430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837048.2;locus_tag=AL55_RS07785;product=hypothetical protein;protein_id=WP_003898430.1;transl_table=11 NZ_KK316828.1 RefSeq gene 474747 475388 . - . ID=gene-AL55_RS07790;Name=AL55_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07790;old_locus_tag=AL55_00411 NZ_KK316828.1 Protein Homology CDS 474747 475388 . - 0 ID=cds-WP_003900917.1;Parent=gene-AL55_RS07790;Dbxref=GenBank:WP_003900917.1;Name=WP_003900917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214912.1;locus_tag=AL55_RS07790;product=hypothetical protein;protein_id=WP_003900917.1;transl_table=11 NZ_KK316828.1 RefSeq gene 475395 476624 . - . ID=gene-AL55_RS07795;Name=lpqK;gbkey=Gene;gene=lpqK;gene_biotype=protein_coding;locus_tag=AL55_RS07795;old_locus_tag=AL55_00412 NZ_KK316828.1 Protein Homology CDS 475395 476624 . - 0 ID=cds-WP_003898432.1;Parent=gene-AL55_RS07795;Dbxref=GenBank:WP_003898432.1;Name=WP_003898432.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lpqK;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214913.1;locus_tag=AL55_RS07795;product=serine hydrolase domain-containing protein;protein_id=WP_003898432.1;transl_table=11 NZ_KK316828.1 RefSeq gene 476634 477821 . - . ID=gene-AL55_RS07800;Name=AL55_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07800;old_locus_tag=AL55_00413 NZ_KK316828.1 Protein Homology CDS 476634 477821 . - 0 ID=cds-WP_003401972.1;Parent=gene-AL55_RS07800;Dbxref=GenBank:WP_003401972.1;Name=WP_003401972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214914.1;locus_tag=AL55_RS07800;product=acyl-CoA dehydrogenase;protein_id=WP_003401972.1;transl_table=11 NZ_KK316828.1 RefSeq gene 477857 478228 . + . ID=gene-AL55_RS07805;Name=AL55_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07805;old_locus_tag=AL55_00414 NZ_KK316828.1 Protein Homology CDS 477857 478228 . + 0 ID=cds-WP_003401978.1;Parent=gene-AL55_RS07805;Dbxref=GenBank:WP_003401978.1;Name=WP_003401978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214915.1;locus_tag=AL55_RS07805;product=DUF3054 domain-containing protein;protein_id=WP_003401978.1;transl_table=11 NZ_KK316828.1 RefSeq gene 478423 481299 . - . ID=gene-AL55_RS07810;Name=mmpL1;gbkey=Gene;gene=mmpL1;gene_biotype=protein_coding;locus_tag=AL55_RS07810;old_locus_tag=AL55_00415 NZ_KK316828.1 Protein Homology CDS 478423 481299 . - 0 ID=cds-WP_003898435.1;Parent=gene-AL55_RS07810;Dbxref=GenBank:WP_003898435.1;Name=WP_003898435.1;gbkey=CDS;gene=mmpL1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214916.1;locus_tag=AL55_RS07810;product=RND transporter MmpL1;protein_id=WP_003898435.1;transl_table=11 NZ_KK316828.1 RefSeq gene 481296 481724 . - . ID=gene-AL55_RS07815;Name=AL55_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07815;old_locus_tag=AL55_00416 NZ_KK316828.1 Protein Homology CDS 481296 481724 . - 0 ID=cds-WP_003402074.1;Parent=gene-AL55_RS07815;Dbxref=GenBank:WP_003402074.1;Name=WP_003402074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214917.1;locus_tag=AL55_RS07815;product=MmpS family transport accessory protein;protein_id=WP_003402074.1;transl_table=11 NZ_KK316828.1 RefSeq gene 482045 483802 . + . ID=gene-AL55_RS07820;Name=fadD30;gbkey=Gene;gene=fadD30;gene_biotype=protein_coding;gene_synonym=faaL30;locus_tag=AL55_RS07820;old_locus_tag=AL55_00417 NZ_KK316828.1 Protein Homology CDS 482045 483802 . + 0 ID=cds-WP_003900921.1;Parent=gene-AL55_RS07820;Dbxref=GenBank:WP_003900921.1;Name=WP_003900921.1;gbkey=CDS;gene=fadD30;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900139.1;locus_tag=AL55_RS07820;product=fatty-acid--AMP ligase FAAL30/FadD30;protein_id=WP_003900921.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 483799 488006 . + . ID=gene-AL55_RS07825;Name=AL55_RS07825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS07825;old_locus_tag=AL55_00418;pseudo=true NZ_KK316828.1 Protein Homology CDS 483799 488006 . + 0 ID=cds-AL55_RS07825;Parent=gene-AL55_RS07825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402080.1;locus_tag=AL55_RS07825;product=beta-ketoacyl synthase N-terminal-like domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 487954 488712 . - . ID=gene-AL55_RS07830;Name=AL55_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07830;old_locus_tag=AL55_00419 NZ_KK316828.1 Protein Homology CDS 487954 488712 . - 0 ID=cds-WP_003911199.1;Parent=gene-AL55_RS07830;Dbxref=GenBank:WP_003911199.1;Name=WP_003911199.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015289016.1;locus_tag=AL55_RS07830;product=MBL fold metallo-hydrolase;protein_id=WP_003911199.1;transl_table=11 NZ_KK316828.1 RefSeq gene 488850 489860 . + . ID=gene-AL55_RS07835;Name=fgd;gbkey=Gene;gene=fgd;gene_biotype=protein_coding;locus_tag=AL55_RS07835;old_locus_tag=AL55_00420 NZ_KK316828.1 Protein Homology CDS 488850 489860 . + 0 ID=cds-WP_003898438.1;Parent=gene-AL55_RS07835;Dbxref=GenBank:WP_003898438.1;Name=WP_003898438.1;Ontology_term=GO:0006007,GO:0016614,GO:0070967;gbkey=CDS;gene=fgd;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,coenzyme F420 binding|0070967||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214921.1;locus_tag=AL55_RS07835;product=glucose-6-phosphate dehydrogenase (coenzyme-F420);protein_id=WP_003898438.1;transl_table=11 NZ_KK316828.1 RefSeq gene 489853 491925 . + . ID=gene-AL55_RS07840;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AL55_RS07840;old_locus_tag=AL55_00421 NZ_KK316828.1 Protein Homology CDS 489853 491925 . + 0 ID=cds-WP_003402089.1;Parent=gene-AL55_RS07840;Dbxref=GenBank:WP_003402089.1;Name=WP_003402089.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214922.1;locus_tag=AL55_RS07840;product=phosphate acetyltransferase;protein_id=WP_003402089.1;transl_table=11 NZ_KK316828.1 RefSeq gene 491918 493075 . + . ID=gene-AL55_RS07845;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=AL55_RS07845;old_locus_tag=AL55_00422 NZ_KK316828.1 Protein Homology CDS 491918 493075 . + 0 ID=cds-WP_003402097.1;Parent=gene-AL55_RS07845;Dbxref=GenBank:WP_003402097.1;Name=WP_003402097.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;gene=ackA;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214923.1;locus_tag=AL55_RS07845;product=acetate kinase;protein_id=WP_003402097.1;transl_table=11 NZ_KK316828.1 RefSeq gene 493129 495381 . - . ID=gene-AL55_RS07850;Name=pknG;gbkey=Gene;gene=pknG;gene_biotype=protein_coding;locus_tag=AL55_RS07850;old_locus_tag=AL55_00423 NZ_KK316828.1 Protein Homology CDS 493129 495381 . - 0 ID=cds-WP_003402100.1;Parent=gene-AL55_RS07850;Dbxref=GenBank:WP_003402100.1;Name=WP_003402100.1;gbkey=CDS;gene=pknG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214924.1;locus_tag=AL55_RS07850;product=serine/threonine protein kinase PknG;protein_id=WP_003402100.1;transl_table=11 NZ_KK316828.1 RefSeq gene 495381 496367 . - . ID=gene-AL55_RS07855;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=AL55_RS07855;old_locus_tag=AL55_00424 NZ_KK316828.1 Protein Homology CDS 495381 496367 . - 0 ID=cds-WP_003900142.1;Parent=gene-AL55_RS07855;Dbxref=GenBank:WP_003900142.1;Name=WP_003900142.1;gbkey=CDS;gene=glnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214925.1;locus_tag=AL55_RS07855;product=glutamate ABC transporter substrate-binding protein;protein_id=WP_003900142.1;transl_table=11 NZ_KK316828.1 RefSeq gene 496367 497686 . - . ID=gene-AL55_RS07860;Name=glnX;gbkey=Gene;gene=glnX;gene_biotype=protein_coding;locus_tag=AL55_RS07860;old_locus_tag=AL55_00425 NZ_KK316828.1 Protein Homology CDS 496367 497686 . - 0 ID=cds-WP_003402108.1;Parent=gene-AL55_RS07860;Dbxref=GenBank:WP_003402108.1;Name=WP_003402108.1;gbkey=CDS;gene=glnX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214926.1;locus_tag=AL55_RS07860;product=protein kinase G-activating protein GlnX;protein_id=WP_003402108.1;transl_table=11 NZ_KK316828.1 RefSeq gene 497813 498433 . + . ID=gene-AL55_RS07865;Name=AL55_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07865;old_locus_tag=AL55_00426 NZ_KK316828.1 Protein Homology CDS 497813 498433 . + 0 ID=cds-WP_003898441.1;Parent=gene-AL55_RS07865;Dbxref=GenBank:WP_003898441.1;Name=WP_003898441.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898441.1;locus_tag=AL55_RS07865;product=NUDIX hydrolase;protein_id=WP_003898441.1;transl_table=11 NZ_KK316828.1 RefSeq gene 498417 499085 . - . ID=gene-AL55_RS07870;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=AL55_RS07870;old_locus_tag=AL55_00427 NZ_KK316828.1 Protein Homology CDS 498417 499085 . - 0 ID=cds-WP_003402115.1;Parent=gene-AL55_RS07870;Dbxref=GenBank:WP_003402115.1;Name=WP_003402115.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214928.1;locus_tag=AL55_RS07870;product=thiamine phosphate synthase;protein_id=WP_003402115.1;transl_table=11 NZ_KK316828.1 cmsearch riboswitch 499114 499224 . + . ID=id-NZ_KK316828.1:499114..499224;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316828.1 RefSeq gene 499215 500237 . + . ID=gene-AL55_RS07875;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=AL55_RS07875;old_locus_tag=AL55_00428 NZ_KK316828.1 Protein Homology CDS 499215 500237 . + 0 ID=cds-WP_003402118.1;Parent=gene-AL55_RS07875;Dbxref=GenBank:WP_003402118.1;Name=WP_003402118.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214929.1;locus_tag=AL55_RS07875;product=glycine oxidase ThiO;protein_id=WP_003402118.1;transl_table=11 NZ_KK316828.1 RefSeq gene 500234 500440 . + . ID=gene-AL55_RS07880;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=AL55_RS07880;old_locus_tag=AL55_00429 NZ_KK316828.1 Protein Homology CDS 500234 500440 . + 0 ID=cds-WP_003402121.1;Parent=gene-AL55_RS07880;Dbxref=GenBank:WP_003402121.1;Name=WP_003402121.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214930.1;locus_tag=AL55_RS07880;product=sulfur carrier protein ThiS;protein_id=WP_003402121.1;transl_table=11 NZ_KK316828.1 RefSeq gene 500433 501191 . + . ID=gene-AL55_RS07885;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=AL55_RS07885;old_locus_tag=AL55_00430 NZ_KK316828.1 Protein Homology CDS 500433 501191 . + 0 ID=cds-WP_003402126.1;Parent=gene-AL55_RS07885;Dbxref=GenBank:WP_003402126.1;Name=WP_003402126.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214931.1;locus_tag=AL55_RS07885;product=thiazole synthase;protein_id=WP_003402126.1;transl_table=11 NZ_KK316828.1 RefSeq gene 501213 501365 . + . ID=gene-AL55_RS25530;Name=AL55_RS25530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25530 NZ_KK316828.1 Protein Homology CDS 501213 501365 . + 0 ID=cds-WP_003402129.1;Parent=gene-AL55_RS25530;Dbxref=GenBank:WP_003402129.1;Name=WP_003402129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402129.1;locus_tag=AL55_RS25530;product=DUF2752 domain-containing protein;protein_id=WP_003402129.1;transl_table=11 NZ_KK316828.1 RefSeq gene 501563 503065 . + . ID=gene-AL55_RS07890;Name=lpqL;gbkey=Gene;gene=lpqL;gene_biotype=protein_coding;locus_tag=AL55_RS07890;old_locus_tag=AL55_00431 NZ_KK316828.1 Protein Homology CDS 501563 503065 . + 0 ID=cds-WP_003402133.1;Parent=gene-AL55_RS07890;Dbxref=GenBank:WP_003402133.1;Name=WP_003402133.1;gbkey=CDS;gene=lpqL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214932.1;locus_tag=AL55_RS07890;product=M28 family metallopeptidase;protein_id=WP_003402133.1;transl_table=11 NZ_KK316828.1 RefSeq gene 503153 504649 . + . ID=gene-AL55_RS07895;Name=lpqM;gbkey=Gene;gene=lpqM;gene_biotype=protein_coding;locus_tag=AL55_RS07895;old_locus_tag=AL55_00432 NZ_KK316828.1 Protein Homology CDS 503153 504649 . + 0 ID=cds-WP_003402135.1;Parent=gene-AL55_RS07895;Dbxref=GenBank:WP_003402135.1;Name=WP_003402135.1;gbkey=CDS;gene=lpqM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214933.1;locus_tag=AL55_RS07895;product=neutral zinc metallopeptidase;protein_id=WP_003402135.1;transl_table=11 NZ_KK316828.1 RefSeq gene 504628 504969 . - . ID=gene-AL55_RS07900;Name=AL55_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07900;old_locus_tag=AL55_00433 NZ_KK316828.1 Protein Homology CDS 504628 504969 . - 0 ID=cds-WP_003911201.1;Parent=gene-AL55_RS07900;Dbxref=GenBank:WP_003911201.1;Name=WP_003911201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911201.1;locus_tag=AL55_RS07900;product=hypothetical protein;protein_id=WP_003911201.1;transl_table=11 NZ_KK316828.1 RefSeq gene 505198 505827 . - . ID=gene-AL55_RS07905;Name=AL55_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07905;old_locus_tag=AL55_00434 NZ_KK316828.1 Protein Homology CDS 505198 505827 . - 0 ID=cds-WP_003402145.1;Parent=gene-AL55_RS07905;Dbxref=GenBank:WP_003402145.1;Name=WP_003402145.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214935.1;locus_tag=AL55_RS07905;product=alpha/beta hydrolase family protein;protein_id=WP_003402145.1;transl_table=11 NZ_KK316828.1 RefSeq gene 505824 506651 . - . ID=gene-AL55_RS07910;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=AL55_RS07910;old_locus_tag=AL55_00435 NZ_KK316828.1 Protein Homology CDS 505824 506651 . - 0 ID=cds-WP_003898443.1;Parent=gene-AL55_RS07910;Dbxref=GenBank:WP_003898443.1;Name=WP_003898443.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898443.1;locus_tag=AL55_RS07910;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_003898443.1;transl_table=11 NZ_KK316828.1 RefSeq gene 506648 508291 . - . ID=gene-AL55_RS07915;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=AL55_RS07915;old_locus_tag=AL55_00436 NZ_KK316828.1 Protein Homology CDS 506648 508291 . - 0 ID=cds-WP_003900143.1;Parent=gene-AL55_RS07915;Dbxref=GenBank:WP_003900143.1;Name=WP_003900143.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214937.1;locus_tag=AL55_RS07915;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_003900143.1;transl_table=11 NZ_KK316828.1 cmsearch riboswitch 508282 508392 . - . ID=id-NZ_KK316828.1:508282..508392;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316828.1 RefSeq gene 508443 508718 . - . ID=gene-AL55_RS07920;Name=AL55_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07920;old_locus_tag=AL55_00437 NZ_KK316828.1 Protein Homology CDS 508443 508718 . - 0 ID=cds-WP_003402157.1;Parent=gene-AL55_RS07920;Dbxref=GenBank:WP_003402157.1;Name=WP_003402157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214938.1;locus_tag=AL55_RS07920;product=hypothetical protein;protein_id=WP_003402157.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 508617 508859 . + . ID=gene-AL55_RS27955;Name=AL55_RS27955;end_range=508859,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27955;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 508617 508859 . + 0 ID=cds-AL55_RS27955;Parent=gene-AL55_RS27955;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=508859,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040653.1;locus_tag=AL55_RS27955;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 508768 513387 . - . ID=gene-AL55_RS27960;Name=ctpH;gbkey=Gene;gene=ctpH;gene_biotype=protein_coding;locus_tag=AL55_RS27960;old_locus_tag=AL55_00438 NZ_KK316828.1 Protein Homology CDS 508768 513387 . - 0 ID=cds-WP_003898445.1;Parent=gene-AL55_RS27960;Dbxref=GenBank:WP_003898445.1;Name=WP_003898445.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;gene=ctpH;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214939.1;locus_tag=AL55_RS27960;product=cation-translocating P-type ATPase;protein_id=WP_003898445.1;transl_table=11 NZ_KK316828.1 RefSeq gene 513439 513882 . - . ID=gene-AL55_RS07930;Name=AL55_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07930;old_locus_tag=AL55_00439 NZ_KK316828.1 Protein Homology CDS 513439 513882 . - 0 ID=cds-WP_003402171.1;Parent=gene-AL55_RS07930;Dbxref=GenBank:WP_003402171.1;Name=WP_003402171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214940.1;locus_tag=AL55_RS07930;product=hypothetical protein;protein_id=WP_003402171.1;transl_table=11 NZ_KK316828.1 RefSeq gene 514083 514889 . - . ID=gene-AL55_RS07935;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=AL55_RS07935;old_locus_tag=AL55_00440 NZ_KK316828.1 Protein Homology CDS 514083 514889 . - 0 ID=cds-WP_031351974.1;Parent=gene-AL55_RS07935;Dbxref=GenBank:WP_031351974.1;Name=WP_031351974.1;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;gene=xthA;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004571494.1;locus_tag=AL55_RS07935;product=exodeoxyribonuclease III;protein_id=WP_031351974.1;transl_table=11 NZ_KK316828.1 RefSeq gene 514961 515869 . - . ID=gene-AL55_RS07940;Name=AL55_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07940;old_locus_tag=AL55_00441 NZ_KK316828.1 Protein Homology CDS 514961 515869 . - 0 ID=cds-WP_003402179.1;Parent=gene-AL55_RS07940;Dbxref=GenBank:WP_003402179.1;Name=WP_003402179.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214942.1;locus_tag=AL55_RS07940;product=N-acetylglutamate synthase%2C CG3035 family;protein_id=WP_003402179.1;transl_table=11 NZ_KK316828.1 RefSeq gene 515869 516462 . - . ID=gene-AL55_RS07945;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AL55_RS07945;old_locus_tag=AL55_00442 NZ_KK316828.1 Protein Homology CDS 515869 516462 . - 0 ID=cds-WP_003402185.1;Parent=gene-AL55_RS07945;Dbxref=GenBank:WP_003402185.1;Name=WP_003402185.1;Ontology_term=GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214943.1;locus_tag=AL55_RS07945;product=peptide deformylase;protein_id=WP_003402185.1;transl_table=11 NZ_KK316828.1 RefSeq gene 516799 517107 . + . ID=gene-AL55_RS07950;Name=AL55_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07950;old_locus_tag=AL55_00443 NZ_KK316828.1 Protein Homology CDS 516799 517107 . + 0 ID=cds-WP_003402188.1;Parent=gene-AL55_RS07950;Dbxref=GenBank:WP_003402188.1;Name=WP_003402188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214944.1;locus_tag=AL55_RS07950;product=DUF3263 domain-containing protein;protein_id=WP_003402188.1;transl_table=11 NZ_KK316828.1 RefSeq gene 517160 517633 . + . ID=gene-AL55_RS07955;Name=AL55_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07955;old_locus_tag=AL55_00444 NZ_KK316828.1 Protein Homology CDS 517160 517633 . + 0 ID=cds-WP_009938812.1;Parent=gene-AL55_RS07955;Dbxref=GenBank:WP_009938812.1;Name=WP_009938812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873789.1;locus_tag=AL55_RS07955;product=vesiculogenesis/immune response regulator VirR;protein_id=WP_009938812.1;transl_table=11 NZ_KK316828.1 RefSeq gene 517666 518388 . + . ID=gene-AL55_RS07960;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AL55_RS07960;old_locus_tag=AL55_00445 NZ_KK316828.1 Protein Homology CDS 517666 518388 . + 0 ID=cds-WP_003402198.1;Parent=gene-AL55_RS07960;Dbxref=GenBank:WP_003402198.1;Name=WP_003402198.1;Ontology_term=GO:0004784,GO:0005507;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA,copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214946.1;locus_tag=AL55_RS07960;product=superoxide dismutase[Cu-Zn];protein_id=WP_003402198.1;transl_table=11 NZ_KK316828.1 RefSeq gene 518390 519520 . + . ID=gene-AL55_RS07965;Name=AL55_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07965;old_locus_tag=AL55_00446 NZ_KK316828.1 Protein Homology CDS 518390 519520 . + 0 ID=cds-WP_003900145.1;Parent=gene-AL55_RS07965;Dbxref=GenBank:WP_003900145.1;Name=WP_003900145.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214947.1;locus_tag=AL55_RS07965;product=glutamate--cysteine ligase;protein_id=WP_003900145.1;transl_table=11 NZ_KK316828.1 RefSeq gene 519580 520233 . + . ID=gene-AL55_RS07970;Name=AL55_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07970;old_locus_tag=AL55_00447 NZ_KK316828.1 Protein Homology CDS 519580 520233 . + 0 ID=cds-WP_003900146.1;Parent=gene-AL55_RS07970;Dbxref=GenBank:WP_003900146.1;Name=WP_003900146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214948.1;locus_tag=AL55_RS07970;product=LON peptidase substrate-binding domain-containing protein;protein_id=WP_003900146.1;transl_table=11 NZ_KK316828.1 RefSeq gene 520413 522599 . - . ID=gene-AL55_RS07975;Name=AL55_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07975;old_locus_tag=AL55_00448 NZ_KK316828.1 Protein Homology CDS 520413 522599 . - 0 ID=cds-WP_003402206.1;Parent=gene-AL55_RS07975;Dbxref=GenBank:WP_003402206.1;Name=WP_003402206.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214949.1;locus_tag=AL55_RS07975;product=AAA family ATPase;protein_id=WP_003402206.1;transl_table=11 NZ_KK316828.1 RefSeq gene 522596 523456 . - . ID=gene-AL55_RS07980;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AL55_RS07980;old_locus_tag=AL55_00449 NZ_KK316828.1 Protein Homology CDS 522596 523456 . - 0 ID=cds-WP_003402213.1;Parent=gene-AL55_RS07980;Dbxref=GenBank:WP_003402213.1;Name=WP_003402213.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214950.1;locus_tag=AL55_RS07980;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_003402213.1;transl_table=11 NZ_KK316828.1 RefSeq gene 523453 524148 . - . ID=gene-AL55_RS07985;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=AL55_RS07985;old_locus_tag=AL55_00450 NZ_KK316828.1 Protein Homology CDS 523453 524148 . - 0 ID=cds-WP_003402216.1;Parent=gene-AL55_RS07985;Dbxref=GenBank:WP_003402216.1;Name=WP_003402216.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=psd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214951.1;locus_tag=AL55_RS07985;product=phosphatidylserine decarboxylase;protein_id=WP_003402216.1;transl_table=11 NZ_KK316828.1 RefSeq gene 524209 525426 . - . ID=gene-AL55_RS07990;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=AL55_RS07990;old_locus_tag=AL55_00451 NZ_KK316828.1 Protein Homology CDS 524209 525426 . - 0 ID=cds-WP_003898451.1;Parent=gene-AL55_RS07990;Dbxref=GenBank:WP_003898451.1;Name=WP_003898451.1;Ontology_term=GO:0032324,GO:0061599;gbkey=CDS;gene=moeA;go_function=molybdopterin molybdotransferase activity|0061599||IEA;go_process=molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177725.1;locus_tag=AL55_RS07990;product=molybdopterin molybdotransferase MoeA;protein_id=WP_003898451.1;transl_table=11 NZ_KK316828.1 RefSeq gene 525445 526380 . - . ID=gene-AL55_RS07995;Name=AL55_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS07995;old_locus_tag=AL55_00452 NZ_KK316828.1 Protein Homology CDS 525445 526380 . - 0 ID=cds-WP_003402219.1;Parent=gene-AL55_RS07995;Dbxref=GenBank:WP_003402219.1;Name=WP_003402219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214953.1;locus_tag=AL55_RS07995;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003402219.1;transl_table=11 NZ_KK316828.1 RefSeq gene 526674 528296 . + . ID=gene-AL55_RS08000;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AL55_RS08000;old_locus_tag=AL55_00453 NZ_KK316828.1 Protein Homology CDS 526674 528296 . + 0 ID=cds-WP_003402236.1;Parent=gene-AL55_RS08000;Dbxref=GenBank:WP_003402236.1;Name=WP_003402236.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214954.1;locus_tag=AL55_RS08000;product=chaperonin GroEL;protein_id=WP_003402236.1;transl_table=11 NZ_KK316828.1 RefSeq gene 528362 528790 . - . ID=gene-AL55_RS08005;Name=AL55_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08005;old_locus_tag=AL55_00454 NZ_KK316828.1 Protein Homology CDS 528362 528790 . - 0 ID=cds-WP_003402238.1;Parent=gene-AL55_RS08005;Dbxref=GenBank:WP_003402238.1;Name=WP_003402238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214955.1;locus_tag=AL55_RS08005;product=hypothetical protein;protein_id=WP_003402238.1;transl_table=11 NZ_KK316828.1 RefSeq gene 528817 530280 . - . ID=gene-AL55_RS08010;Name=AL55_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08010;old_locus_tag=AL55_00455 NZ_KK316828.1 Protein Homology CDS 528817 530280 . - 0 ID=cds-WP_003402239.1;Parent=gene-AL55_RS08010;Dbxref=GenBank:WP_003402239.1;Name=WP_003402239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177726.2;locus_tag=AL55_RS08010;product=PPE family protein;protein_id=WP_003402239.1;transl_table=11 NZ_KK316828.1 RefSeq gene 530462 530977 . + . ID=gene-AL55_RS08015;Name=AL55_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08015;old_locus_tag=AL55_00456 NZ_KK316828.1 Protein Homology CDS 530462 530977 . + 0 ID=cds-WP_003402240.1;Parent=gene-AL55_RS08015;Dbxref=GenBank:WP_003402240.1;Name=WP_003402240.1;Ontology_term=GO:0010127,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=mycothiol-dependent detoxification|0010127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214957.1;locus_tag=AL55_RS08015;product=mycothiol transferase;protein_id=WP_003402240.1;transl_table=11 NZ_KK316828.1 RefSeq gene 531157 531855 . - . ID=gene-AL55_RS08020;Name=rskA;gbkey=Gene;gene=rskA;gene_biotype=protein_coding;locus_tag=AL55_RS08020;old_locus_tag=AL55_00457 NZ_KK316828.1 Protein Homology CDS 531157 531855 . - 0 ID=cds-WP_003905315.1;Parent=gene-AL55_RS08020;Dbxref=GenBank:WP_003905315.1;Name=WP_003905315.1;gbkey=CDS;gene=rskA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214958.1;locus_tag=AL55_RS08020;product=anti-sigma-K factor RskA;protein_id=WP_003905315.1;transl_table=11 NZ_KK316828.1 RefSeq gene 531899 532462 . - . ID=gene-AL55_RS08025;Name=sigK;gbkey=Gene;gene=sigK;gene_biotype=protein_coding;locus_tag=AL55_RS08025;old_locus_tag=AL55_00458 NZ_KK316828.1 Protein Homology CDS 531899 532462 . - 0 ID=cds-WP_003402246.1;Parent=gene-AL55_RS08025;Dbxref=GenBank:WP_003402246.1;Name=WP_003402246.1;gbkey=CDS;gene=sigK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214959.1;locus_tag=AL55_RS08025;product=sigma-70 family RNA polymerase sigma factor SigK;protein_id=WP_003402246.1;transl_table=11 NZ_KK316828.1 RefSeq gene 532511 533281 . - . ID=gene-AL55_RS08030;Name=AL55_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08030;old_locus_tag=AL55_00459 NZ_KK316828.1 Protein Homology CDS 532511 533281 . - 0 ID=cds-WP_003402248.1;Parent=gene-AL55_RS08030;Dbxref=GenBank:WP_003402248.1;Name=WP_003402248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214960.1;locus_tag=AL55_RS08030;product=DUF1295 domain-containing protein;protein_id=WP_003402248.1;transl_table=11 NZ_KK316828.1 RefSeq gene 533290 534573 . - . ID=gene-AL55_RS08035;Name=AL55_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08035;old_locus_tag=AL55_00460 NZ_KK316828.1 Protein Homology CDS 533290 534573 . - 0 ID=cds-WP_003402250.1;Parent=gene-AL55_RS08035;Dbxref=GenBank:WP_003402250.1;Name=WP_003402250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214961.1;locus_tag=AL55_RS08035;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_003402250.1;transl_table=11 NZ_KK316828.1 RefSeq gene 534570 535301 . - . ID=gene-AL55_RS08040;Name=AL55_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08040;old_locus_tag=AL55_00461 NZ_KK316828.1 Protein Homology CDS 534570 535301 . - 0 ID=cds-WP_003900930.1;Parent=gene-AL55_RS08040;Dbxref=GenBank:WP_003900930.1;Name=WP_003900930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900930.1;locus_tag=AL55_RS08040;product=DUF1365 domain-containing protein;protein_id=WP_003900930.1;transl_table=11 NZ_KK316828.1 RefSeq gene 535295 536614 . - . ID=gene-AL55_RS08045;Name=AL55_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08045;old_locus_tag=AL55_00462 NZ_KK316828.1 Protein Homology CDS 535295 536614 . - 0 ID=cds-WP_003402268.1;Parent=gene-AL55_RS08045;Dbxref=GenBank:WP_003402268.1;Name=WP_003402268.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214963.1;locus_tag=AL55_RS08045;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003402268.1;transl_table=11 NZ_KK316828.1 RefSeq gene 536654 539557 . - . ID=gene-AL55_RS08050;Name=mmpL4;gbkey=Gene;gene=mmpL4;gene_biotype=protein_coding;locus_tag=AL55_RS08050;old_locus_tag=AL55_00463 NZ_KK316828.1 Protein Homology CDS 536654 539557 . - 0 ID=cds-WP_003898458.1;Parent=gene-AL55_RS08050;Dbxref=GenBank:WP_003898458.1;Name=WP_003898458.1;gbkey=CDS;gene=mmpL4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898458.1;locus_tag=AL55_RS08050;product=siderophore RND transporter MmpL4;protein_id=WP_003898458.1;transl_table=11 NZ_KK316828.1 RefSeq gene 539554 539976 . - . ID=gene-AL55_RS08055;Name=mmpS4;gbkey=Gene;gene=mmpS4;gene_biotype=protein_coding;locus_tag=AL55_RS08055;old_locus_tag=AL55_00464 NZ_KK316828.1 Protein Homology CDS 539554 539976 . - 0 ID=cds-WP_003402272.1;Parent=gene-AL55_RS08055;Dbxref=GenBank:WP_003402272.1;Name=WP_003402272.1;gbkey=CDS;gene=mmpS4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214965.1;locus_tag=AL55_RS08055;product=siderophore RND transporter accessory protein MmpS4;protein_id=WP_003402272.1;transl_table=11 NZ_KK316828.1 RefSeq gene 540208 540918 . + . ID=gene-AL55_RS08060;Name=AL55_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08060;old_locus_tag=AL55_00465 NZ_KK316828.1 Protein Homology CDS 540208 540918 . + 0 ID=cds-WP_031695346.1;Parent=gene-AL55_RS08060;Dbxref=GenBank:WP_031695346.1;Name=WP_031695346.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214966.1;locus_tag=AL55_RS08060;product=TetR/AcrR family transcriptional regulator;protein_id=WP_031695346.1;transl_table=11 NZ_KK316828.1 RefSeq gene 541240 542796 . + . ID=gene-AL55_RS08065;Name=AL55_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08065;old_locus_tag=AL55_00466 NZ_KK316828.1 Protein Homology CDS 541240 542796 . + 0 ID=cds-WP_003402284.1;Parent=gene-AL55_RS08065;Dbxref=GenBank:WP_003402284.1;Name=WP_003402284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177727.1;locus_tag=AL55_RS08065;product=PPE family protein;protein_id=WP_003402284.1;transl_table=11 NZ_KK316828.1 RefSeq gene 542802 543125 . - . ID=gene-AL55_RS27200;Name=AL55_RS27200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27200 NZ_KK316828.1 Protein Homology CDS 542802 543125 . - 0 ID=cds-WP_003898461.1;Parent=gene-AL55_RS27200;Dbxref=GenBank:WP_003898461.1;Name=WP_003898461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898461.1;locus_tag=AL55_RS27200;product=hypothetical protein;protein_id=WP_003898461.1;transl_table=11 NZ_KK316828.1 RefSeq gene 543441 543887 . - . ID=gene-AL55_RS08070;Name=AL55_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08070;old_locus_tag=AL55_00468 NZ_KK316828.1 Protein Homology CDS 543441 543887 . - 0 ID=cds-WP_003402286.1;Parent=gene-AL55_RS08070;Dbxref=GenBank:WP_003402286.1;Name=WP_003402286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214969.1;locus_tag=AL55_RS08070;product=DUF5078 domain-containing protein;protein_id=WP_003402286.1;transl_table=11 NZ_KK316828.1 RefSeq gene 543955 544869 . - . ID=gene-AL55_RS08075;Name=AL55_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08075;old_locus_tag=AL55_00469 NZ_KK316828.1 Protein Homology CDS 543955 544869 . - 0 ID=cds-WP_003898463.1;Parent=gene-AL55_RS08075;Dbxref=GenBank:WP_003898463.1;Name=WP_003898463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214970.1;locus_tag=AL55_RS08075;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003898463.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 545101 545423 . - . ID=gene-AL55_RS08080;Name=AL55_RS08080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS08080;old_locus_tag=AL55_00470;pseudo=true NZ_KK316828.1 Protein Homology CDS 545101 545423 . - 0 ID=cds-AL55_RS08080;Parent=gene-AL55_RS08080;Note=frameshifted;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013831006.1;locus_tag=AL55_RS08080;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 545410 545583 . - . ID=gene-AL55_RS08085;Name=AL55_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08085;old_locus_tag=AL55_00471 NZ_KK316828.1 Protein Homology CDS 545410 545583 . - 0 ID=cds-WP_003903009.1;Parent=gene-AL55_RS08085;Dbxref=GenBank:WP_003903009.1;Name=WP_003903009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409102.1;locus_tag=AL55_RS08085;product=antitoxin MazE;protein_id=WP_003903009.1;transl_table=11 NZ_KK316828.1 RefSeq gene 545652 547673 . - . ID=gene-AL55_RS08090;Name=AL55_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08090;old_locus_tag=AL55_00472 NZ_KK316828.1 Protein Homology CDS 545652 547673 . - 0 ID=cds-WP_009940441.1;Parent=gene-AL55_RS08090;Dbxref=GenBank:WP_009940441.1;Name=WP_009940441.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214971.1;locus_tag=AL55_RS08090;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_009940441.1;transl_table=11 NZ_KK316828.1 RefSeq gene 547741 549264 . + . ID=gene-AL55_RS08095;Name=exaC;gbkey=Gene;gene=exaC;gene_biotype=protein_coding;locus_tag=AL55_RS08095;old_locus_tag=AL55_00473 NZ_KK316828.1 Protein Homology CDS 547741 549264 . + 0 ID=cds-WP_003402294.1;Parent=gene-AL55_RS08095;Dbxref=GenBank:WP_003402294.1;Name=WP_003402294.1;Ontology_term=GO:0006068,GO:0004029;gbkey=CDS;gene=exaC;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA;go_process=ethanol catabolic process|0006068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214972.1;locus_tag=AL55_RS08095;product=acetaldehyde dehydrogenase ExaC;protein_id=WP_003402294.1;transl_table=11 NZ_KK316828.1 RefSeq gene 549264 549755 . + . ID=gene-AL55_RS08100;Name=AL55_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08100;old_locus_tag=AL55_00474 NZ_KK316828.1 Protein Homology CDS 549264 549755 . + 0 ID=cds-WP_003898464.1;Parent=gene-AL55_RS08100;Dbxref=GenBank:WP_003898464.1;Name=WP_003898464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214973.1;locus_tag=AL55_RS08100;product=DUF779 domain-containing protein;protein_id=WP_003898464.1;transl_table=11 NZ_KK316828.1 RefSeq gene 549776 550054 . + . ID=gene-AL55_RS08105;Name=AL55_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08105;old_locus_tag=AL55_00475 NZ_KK316828.1 Protein Homology CDS 549776 550054 . + 0 ID=cds-WP_003898465.1;Parent=gene-AL55_RS08105;Dbxref=GenBank:WP_003898465.1;Name=WP_003898465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015626659.1;locus_tag=AL55_RS08105;product=putative holin;protein_id=WP_003898465.1;transl_table=11 NZ_KK316828.1 RefSeq gene 550047 550616 . + . ID=gene-AL55_RS08110;Name=AL55_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08110;old_locus_tag=AL55_00476 NZ_KK316828.1 Protein Homology CDS 550047 550616 . + 0 ID=cds-WP_003898466.1;Parent=gene-AL55_RS08110;Dbxref=GenBank:WP_003898466.1;Name=WP_003898466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898466.1;locus_tag=AL55_RS08110;product=hypothetical protein;protein_id=WP_003898466.1;transl_table=11 NZ_KK316828.1 RefSeq gene 550680 552074 . + . ID=gene-AL55_RS08115;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AL55_RS08115;old_locus_tag=AL55_00477 NZ_KK316828.1 Protein Homology CDS 550680 552074 . + 0 ID=cds-WP_003402301.1;Parent=gene-AL55_RS08115;Dbxref=GenBank:WP_003402301.1;Name=WP_003402301.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214976.1;locus_tag=AL55_RS08115;product=dihydrolipoyl dehydrogenase;protein_id=WP_003402301.1;transl_table=11 NZ_KK316828.1 RefSeq gene 552082 552375 . + . ID=gene-AL55_RS08120;Name=AL55_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08120;old_locus_tag=AL55_00478 NZ_KK316828.1 Protein Homology CDS 552082 552375 . + 0 ID=cds-WP_003402304.1;Parent=gene-AL55_RS08120;Dbxref=GenBank:WP_003402304.1;Name=WP_003402304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214977.1;locus_tag=AL55_RS08120;product=hypothetical protein;protein_id=WP_003402304.1;transl_table=11 NZ_KK316828.1 RefSeq gene 552379 552951 . - . ID=gene-AL55_RS08125;Name=AL55_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08125;old_locus_tag=AL55_00479 NZ_KK316828.1 Protein Homology CDS 552379 552951 . - 0 ID=cds-WP_003402306.1;Parent=gene-AL55_RS08125;Dbxref=GenBank:WP_003402306.1;Name=WP_003402306.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214978.1;locus_tag=AL55_RS08125;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003402306.1;transl_table=11 NZ_KK316828.1 RefSeq gene 552948 554372 . - . ID=gene-AL55_RS08130;Name=ramB;gbkey=Gene;gene=ramB;gene_biotype=protein_coding;locus_tag=AL55_RS08130;old_locus_tag=AL55_00480 NZ_KK316828.1 Protein Homology CDS 552948 554372 . - 0 ID=cds-WP_003900935.1;Parent=gene-AL55_RS08130;Dbxref=GenBank:WP_003900935.1;Name=WP_003900935.1;gbkey=CDS;gene=ramB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214979.1;locus_tag=AL55_RS08130;product=acetate metabolism transcriptional regulator RamB;protein_id=WP_003900935.1;transl_table=11 NZ_KK316828.1 RefSeq gene 554524 555318 . + . ID=gene-AL55_RS08135;Name=AL55_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08135;old_locus_tag=AL55_00481 NZ_KK316828.1 Protein Homology CDS 554524 555318 . + 0 ID=cds-WP_003402311.1;Parent=gene-AL55_RS08135;Dbxref=GenBank:WP_003402311.1;Name=WP_003402311.1;Ontology_term=GO:0006633,GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214980.1;locus_tag=AL55_RS08135;product=acyl-[acyl-carrier-protein] thioesterase;protein_id=WP_003402311.1;transl_table=11 NZ_KK316828.1 RefSeq gene 555593 556879 . + . ID=gene-AL55_RS08140;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AL55_RS08140;old_locus_tag=AL55_00482 NZ_KK316828.1 Protein Homology CDS 555593 556879 . + 0 ID=cds-WP_003402316.1;Parent=gene-AL55_RS08140;Dbxref=GenBank:WP_003402316.1;Name=WP_003402316.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177728.1;locus_tag=AL55_RS08140;product=isocitrate lyase;protein_id=WP_003402316.1;transl_table=11 NZ_KK316828.1 RefSeq gene 556961 557821 . + . ID=gene-AL55_RS08145;Name=fadB2;gbkey=Gene;gene=fadB2;gene_biotype=protein_coding;locus_tag=AL55_RS08145;old_locus_tag=AL55_00483 NZ_KK316828.1 Protein Homology CDS 556961 557821 . + 0 ID=cds-WP_003402318.1;Parent=gene-AL55_RS08145;Dbxref=GenBank:WP_003402318.1;Name=WP_003402318.1;gbkey=CDS;gene=fadB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214982.1;locus_tag=AL55_RS08145;product=3-hydroxybutyryl-CoA dehydrogenase FadB2;protein_id=WP_003402318.1;transl_table=11 NZ_KK316828.1 RefSeq gene 557954 558814 . + . ID=gene-AL55_RS08150;Name=umaA;gbkey=Gene;gene=umaA;gene_biotype=protein_coding;locus_tag=AL55_RS08150;old_locus_tag=AL55_00484 NZ_KK316828.1 Protein Homology CDS 557954 558814 . + 0 ID=cds-WP_003900153.1;Parent=gene-AL55_RS08150;Dbxref=GenBank:WP_003900153.1;Name=WP_003900153.1;gbkey=CDS;gene=umaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177729.1;locus_tag=AL55_RS08150;product=SAM-dependent methyltransferase UmaA;protein_id=WP_003900153.1;transl_table=11 NZ_KK316828.1 RefSeq gene 558914 559777 . - . ID=gene-AL55_RS08155;Name=pcaA;gbkey=Gene;gene=pcaA;gene_biotype=protein_coding;locus_tag=AL55_RS08155;old_locus_tag=AL55_00485 NZ_KK316828.1 Protein Homology CDS 558914 559777 . - 0 ID=cds-WP_003402323.1;Parent=gene-AL55_RS08155;Dbxref=GenBank:WP_003402323.1;Name=WP_003402323.1;gbkey=CDS;gene=pcaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177730.1;locus_tag=AL55_RS08155;product=cyclopropane mycolic acid synthase PcaA;protein_id=WP_003402323.1;transl_table=11 NZ_KK316828.1 RefSeq gene 559920 560360 . - . ID=gene-AL55_RS08160;Name=AL55_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08160;old_locus_tag=AL55_00486 NZ_KK316828.1 Protein Homology CDS 559920 560360 . - 0 ID=cds-WP_003898470.1;Parent=gene-AL55_RS08160;Dbxref=GenBank:WP_003898470.1;Name=WP_003898470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177622.1;locus_tag=AL55_RS08160;product=UbiA prenyltransferase family protein;protein_id=WP_003898470.1;transl_table=11 NZ_KK316828.1 RefSeq gene 560291 560779 . - . ID=gene-AL55_RS08165;Name=AL55_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08165;old_locus_tag=AL55_00487 NZ_KK316828.1 Protein Homology CDS 560291 560779 . - 0 ID=cds-WP_003402327.1;Parent=gene-AL55_RS08165;Dbxref=GenBank:WP_003402327.1;Name=WP_003402327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214985.1;locus_tag=AL55_RS08165;product=UbiA prenyltransferase family protein;protein_id=WP_003402327.1;transl_table=11 NZ_KK316828.1 RefSeq gene 560789 561493 . - . ID=gene-AL55_RS08170;Name=AL55_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08170;old_locus_tag=AL55_00488 NZ_KK316828.1 Protein Homology CDS 560789 561493 . - 0 ID=cds-WP_003402330.1;Parent=gene-AL55_RS08170;Dbxref=GenBank:WP_003402330.1;Name=WP_003402330.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214986.1;locus_tag=AL55_RS08170;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003402330.1;transl_table=11 NZ_KK316828.1 RefSeq gene 561630 563000 . + . ID=gene-AL55_RS08175;Name=AL55_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08175;old_locus_tag=AL55_00489 NZ_KK316828.1 Protein Homology CDS 561630 563000 . + 0 ID=cds-WP_003402332.1;Parent=gene-AL55_RS08175;Dbxref=GenBank:WP_003402332.1;Name=WP_003402332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214987.2;locus_tag=AL55_RS08175;product=DUF445 domain-containing protein;protein_id=WP_003402332.1;transl_table=11 NZ_KK316828.1 RefSeq gene 563087 563509 . + . ID=gene-AL55_RS08180;Name=AL55_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08180;old_locus_tag=AL55_00490 NZ_KK316828.1 Protein Homology CDS 563087 563509 . + 0 ID=cds-WP_003402335.1;Parent=gene-AL55_RS08180;Dbxref=GenBank:WP_003402335.1;Name=WP_003402335.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214988.1;locus_tag=AL55_RS08180;product=helix-turn-helix domain-containing protein;protein_id=WP_003402335.1;transl_table=11 NZ_KK316828.1 RefSeq gene 563863 564462 . + . ID=gene-AL55_RS08185;Name=hbhA;gbkey=Gene;gene=hbhA;gene_biotype=protein_coding;locus_tag=AL55_RS08185;old_locus_tag=AL55_00491 NZ_KK316828.1 Protein Homology CDS 563863 564462 . + 0 ID=cds-WP_003402339.1;Parent=gene-AL55_RS08185;Dbxref=GenBank:WP_003402339.1;Name=WP_003402339.1;gbkey=CDS;gene=hbhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214989.1;locus_tag=AL55_RS08185;product=heparin-binding hemagglutinin HbhA;protein_id=WP_003402339.1;transl_table=11 NZ_KK316828.1 RefSeq gene 564550 564837 . + . ID=gene-AL55_RS08190;Name=AL55_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08190;old_locus_tag=AL55_00492 NZ_KK316828.1 Protein Homology CDS 564550 564837 . + 0 ID=cds-WP_003898474.1;Parent=gene-AL55_RS08190;Dbxref=GenBank:WP_003898474.1;Name=WP_003898474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898474.1;locus_tag=AL55_RS08190;product=DUF2516 family protein;protein_id=WP_003898474.1;transl_table=11 NZ_KK316828.1 RefSeq gene 564842 565288 . + . ID=gene-AL55_RS08195;Name=AL55_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08195;old_locus_tag=AL55_00493 NZ_KK316828.1 Protein Homology CDS 564842 565288 . + 0 ID=cds-WP_003402344.1;Parent=gene-AL55_RS08195;Dbxref=GenBank:WP_003402344.1;Name=WP_003402344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214991.1;locus_tag=AL55_RS08195;product=DUF2599 domain-containing protein;protein_id=WP_003402344.1;transl_table=11 NZ_KK316828.1 RefSeq gene 565288 565962 . + . ID=gene-AL55_RS08200;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AL55_RS08200;old_locus_tag=AL55_00494 NZ_KK316828.1 Protein Homology CDS 565288 565962 . + 0 ID=cds-WP_003402347.1;Parent=gene-AL55_RS08200;Dbxref=GenBank:WP_003402347.1;Name=WP_003402347.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214992.1;locus_tag=AL55_RS08200;product=deoxyribose-phosphate aldolase;protein_id=WP_003402347.1;transl_table=11 NZ_KK316828.1 RefSeq gene 565987 567033 . - . ID=gene-AL55_RS08205;Name=AL55_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08205;old_locus_tag=AL55_00495 NZ_KK316828.1 Protein Homology CDS 565987 567033 . - 0 ID=cds-WP_003898475.1;Parent=gene-AL55_RS08205;Dbxref=GenBank:WP_003898475.1;Name=WP_003898475.1;Ontology_term=GO:0005543;gbkey=CDS;go_function=phospholipid binding|0005543||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214993.1;locus_tag=AL55_RS08205;product=LmeA family phospholipid-binding protein;protein_id=WP_003898475.1;transl_table=11 NZ_KK316828.1 RefSeq gene 567030 567872 . - . ID=gene-AL55_RS08210;Name=AL55_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08210;old_locus_tag=AL55_00496 NZ_KK316828.1 Protein Homology CDS 567030 567872 . - 0 ID=cds-WP_003402350.1;Parent=gene-AL55_RS08210;Dbxref=GenBank:WP_003402350.1;Name=WP_003402350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214994.2;locus_tag=AL55_RS08210;product=carbon-nitrogen hydrolase family protein;protein_id=WP_003402350.1;transl_table=11 NZ_KK316828.1 RefSeq gene 568054 568578 . - . ID=gene-AL55_RS08215;Name=AL55_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08215;old_locus_tag=AL55_00497 NZ_KK316828.1 Protein Homology CDS 568054 568578 . - 0 ID=cds-WP_003402351.1;Parent=gene-AL55_RS08215;Dbxref=GenBank:WP_003402351.1;Name=WP_003402351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214995.1;locus_tag=AL55_RS08215;product=DUF2505 domain-containing protein;protein_id=WP_003402351.1;transl_table=11 NZ_KK316828.1 RefSeq gene 568605 569714 . + . ID=gene-AL55_RS08220;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AL55_RS08220;old_locus_tag=AL55_00498 NZ_KK316828.1 Protein Homology CDS 568605 569714 . + 0 ID=cds-WP_003402354.1;Parent=gene-AL55_RS08220;Dbxref=GenBank:WP_003402354.1;Name=WP_003402354.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214996.1;locus_tag=AL55_RS08220;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_003402354.1;transl_table=11 NZ_KK316828.1 RefSeq gene 569776 571131 . + . ID=gene-AL55_RS08225;Name=ldtMt5;gbkey=Gene;gene=ldtMt5;gene_biotype=protein_coding;locus_tag=AL55_RS08225;old_locus_tag=AL55_00499 NZ_KK316828.1 Protein Homology CDS 569776 571131 . + 0 ID=cds-WP_003402357.1;Parent=gene-AL55_RS08225;Dbxref=GenBank:WP_003402357.1;Name=WP_003402357.1;gbkey=CDS;gene=ldtMt5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214997.1;locus_tag=AL55_RS08225;product=L%2CD-transpeptidase LdtMt5;protein_id=WP_003402357.1;transl_table=11 NZ_KK316828.1 RefSeq gene 571112 571867 . - . ID=gene-AL55_RS08230;Name=AL55_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08230;old_locus_tag=AL55_00500 NZ_KK316828.1 Protein Homology CDS 571112 571867 . - 0 ID=cds-WP_003900154.1;Parent=gene-AL55_RS08230;Dbxref=GenBank:WP_003900154.1;Name=WP_003900154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214998.1;locus_tag=AL55_RS08230;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003900154.1;transl_table=11 NZ_KK316828.1 RefSeq gene 572050 573366 . + . ID=gene-AL55_RS08235;Name=AL55_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08235;old_locus_tag=AL55_00501 NZ_KK316828.1 Protein Homology CDS 572050 573366 . + 0 ID=cds-WP_003402361.1;Parent=gene-AL55_RS08235;Dbxref=GenBank:WP_003402361.1;Name=WP_003402361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214999.1;locus_tag=AL55_RS08235;product=transcriptional regulator;protein_id=WP_003402361.1;transl_table=11 NZ_KK316828.1 RefSeq gene 573414 574856 . + . ID=gene-AL55_RS08240;Name=mshA;gbkey=Gene;gene=mshA;gene_biotype=protein_coding;locus_tag=AL55_RS08240;old_locus_tag=AL55_00502 NZ_KK316828.1 Protein Homology CDS 573414 574856 . + 0 ID=cds-WP_003905320.1;Parent=gene-AL55_RS08240;Dbxref=GenBank:WP_003905320.1;Name=WP_003905320.1;Ontology_term=GO:0010125,GO:0008375;gbkey=CDS;gene=mshA;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215000.1;locus_tag=AL55_RS08240;product=D-inositol-3-phosphate glycosyltransferase;protein_id=WP_003905320.1;transl_table=11 NZ_KK316828.1 RefSeq gene 574853 575404 . + . ID=gene-AL55_RS08245;Name=AL55_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08245;old_locus_tag=AL55_00503 NZ_KK316828.1 Protein Homology CDS 574853 575404 . + 0 ID=cds-WP_003402370.1;Parent=gene-AL55_RS08245;Dbxref=GenBank:WP_003402370.1;Name=WP_003402370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215001.1;locus_tag=AL55_RS08245;product=type III secretion system chaperone family protein;protein_id=WP_003402370.1;transl_table=11 NZ_KK316828.1 RefSeq gene 575730 576335 . + . ID=gene-AL55_RS08250;Name=lysE;gbkey=Gene;gene=lysE;gene_biotype=protein_coding;locus_tag=AL55_RS08250;old_locus_tag=AL55_00504 NZ_KK316828.1 Protein Homology CDS 575730 576335 . + 0 ID=cds-WP_003402377.1;Parent=gene-AL55_RS08250;Dbxref=GenBank:WP_003402377.1;Name=WP_003402377.1;Ontology_term=GO:0016020;gbkey=CDS;gene=lysE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898479.1;locus_tag=AL55_RS08250;product=L-lysine exporter;protein_id=WP_003402377.1;transl_table=11 NZ_KK316828.1 RefSeq gene 576492 577241 . + . ID=gene-AL55_RS08255;Name=AL55_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08255;old_locus_tag=AL55_00505 NZ_KK316828.1 Protein Homology CDS 576492 577241 . + 0 ID=cds-WP_003402379.1;Parent=gene-AL55_RS08255;Dbxref=GenBank:WP_003402379.1;Name=WP_003402379.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177731.1;locus_tag=AL55_RS08255;product=phosphoglyceromutase;protein_id=WP_003402379.1;transl_table=11 NZ_KK316828.1 RefSeq gene 577415 578647 . + . ID=gene-AL55_RS08260;Name=senX3;gbkey=Gene;gene=senX3;gene_biotype=protein_coding;locus_tag=AL55_RS08260;old_locus_tag=AL55_00506 NZ_KK316828.1 Protein Homology CDS 577415 578647 . + 0 ID=cds-WP_003402390.1;Parent=gene-AL55_RS08260;Dbxref=GenBank:WP_003402390.1;Name=WP_003402390.1;gbkey=CDS;gene=senX3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215004.1;locus_tag=AL55_RS08260;product=two-component system sensor histidine kinase SenX3;protein_id=WP_003402390.1;transl_table=11 NZ_KK316828.1 RefSeq gene 578851 579534 . + . ID=gene-AL55_RS08265;Name=regX;gbkey=Gene;gene=regX;gene_biotype=protein_coding;locus_tag=AL55_RS08265;old_locus_tag=AL55_00507 NZ_KK316828.1 Protein Homology CDS 578851 579534 . + 0 ID=cds-WP_003402393.1;Parent=gene-AL55_RS08265;Dbxref=GenBank:WP_003402393.1;Name=WP_003402393.1;gbkey=CDS;gene=regX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402393.1;locus_tag=AL55_RS08265;product=two-component sensory transduction protein RegX;protein_id=WP_003402393.1;transl_table=11 NZ_KK316828.1 RefSeq gene 579531 581420 . - . ID=gene-AL55_RS08270;Name=AL55_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08270;old_locus_tag=AL55_00508 NZ_KK316828.1 Protein Homology CDS 579531 581420 . - 0 ID=cds-WP_031695351.1;Parent=gene-AL55_RS08270;Dbxref=GenBank:WP_031695351.1;Name=WP_031695351.1;Ontology_term=GO:0016614,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215006.2;locus_tag=AL55_RS08270;product=GMC family oxidoreductase;protein_id=WP_031695351.1;transl_table=11 NZ_KK316828.1 RefSeq gene 581417 581746 . - . ID=gene-AL55_RS08275;Name=AL55_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08275;old_locus_tag=AL55_00509 NZ_KK316828.1 Protein Homology CDS 581417 581746 . - 0 ID=cds-WP_003402400.1;Parent=gene-AL55_RS08275;Dbxref=GenBank:WP_003402400.1;Name=WP_003402400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177623.1;locus_tag=AL55_RS08275;product=hypothetical protein;protein_id=WP_003402400.1;transl_table=11 NZ_KK316828.1 RefSeq gene 581743 582693 . - . ID=gene-AL55_RS08280;Name=AL55_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08280;old_locus_tag=AL55_00510 NZ_KK316828.1 Protein Homology CDS 581743 582693 . - 0 ID=cds-WP_003918084.1;Parent=gene-AL55_RS08280;Dbxref=GenBank:WP_003918084.1;Name=WP_003918084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911182.1;locus_tag=AL55_RS08280;product=hypothetical protein;protein_id=WP_003918084.1;transl_table=11 NZ_KK316828.1 RefSeq gene 582749 583465 . + . ID=gene-AL55_RS08285;Name=AL55_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08285;old_locus_tag=AL55_00511 NZ_KK316828.1 Protein Homology CDS 582749 583465 . + 0 ID=cds-WP_003898483.1;Parent=gene-AL55_RS08285;Dbxref=GenBank:WP_003898483.1;Name=WP_003898483.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898483.1;locus_tag=AL55_RS08285;product=FadR/GntR family transcriptional regulator;protein_id=WP_003898483.1;transl_table=11 NZ_KK316828.1 RefSeq gene 583466 584260 . - . ID=gene-AL55_RS08290;Name=AL55_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08290;old_locus_tag=AL55_00512 NZ_KK316828.1 Protein Homology CDS 583466 584260 . - 0 ID=cds-WP_023637344.1;Parent=gene-AL55_RS08290;Dbxref=GenBank:WP_023637344.1;Name=WP_023637344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003879313.1;locus_tag=AL55_RS08290;product=DUF3109 family protein;protein_id=WP_023637344.1;transl_table=11 NZ_KK316828.1 RefSeq gene 584388 585422 . + . ID=gene-AL55_RS08295;Name=ppx1;gbkey=Gene;gene=ppx1;gene_biotype=protein_coding;locus_tag=AL55_RS08295;old_locus_tag=AL55_00513 NZ_KK316828.1 Protein Homology CDS 584388 585422 . + 0 ID=cds-WP_003402419.1;Parent=gene-AL55_RS08295;Dbxref=GenBank:WP_003402419.1;Name=WP_003402419.1;gbkey=CDS;gene=ppx1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402419.1;locus_tag=AL55_RS08295;product=exopolyphosphatase Ppx1;protein_id=WP_003402419.1;transl_table=11 NZ_KK316828.1 RefSeq gene 585419 586351 . + . ID=gene-AL55_RS08300;Name=AL55_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08300;old_locus_tag=AL55_00514 NZ_KK316828.1 Protein Homology CDS 585419 586351 . + 0 ID=cds-WP_003402426.1;Parent=gene-AL55_RS08300;Dbxref=GenBank:WP_003402426.1;Name=WP_003402426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215011.1;locus_tag=AL55_RS08300;product=hypothetical protein;protein_id=WP_003402426.1;transl_table=11 NZ_KK316828.1 RefSeq gene 586367 587209 . + . ID=gene-AL55_RS08305;Name=AL55_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08305;old_locus_tag=AL55_00515 NZ_KK316828.1 Protein Homology CDS 586367 587209 . + 0 ID=cds-WP_003402432.1;Parent=gene-AL55_RS08305;Dbxref=GenBank:WP_003402432.1;Name=WP_003402432.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215012.1;locus_tag=AL55_RS08305;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_003402432.1;transl_table=11 NZ_KK316828.1 RefSeq gene 587225 588100 . + . ID=gene-AL55_RS08310;Name=AL55_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08310;old_locus_tag=AL55_00516 NZ_KK316828.1 Protein Homology CDS 587225 588100 . + 0 ID=cds-WP_003402433.1;Parent=gene-AL55_RS08310;Dbxref=GenBank:WP_003402433.1;Name=WP_003402433.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215013.1;locus_tag=AL55_RS08310;product=thioesterase family protein;protein_id=WP_003402433.1;transl_table=11 NZ_KK316828.1 RefSeq gene 588137 589012 . + . ID=gene-AL55_RS08315;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=AL55_RS08315;old_locus_tag=AL55_00517 NZ_KK316828.1 Protein Homology CDS 588137 589012 . + 0 ID=cds-WP_003914605.1;Parent=gene-AL55_RS08315;Dbxref=GenBank:WP_003914605.1;Name=WP_003914605.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003892370.1;locus_tag=AL55_RS08315;product=pyrroline-5-carboxylate reductase;protein_id=WP_003914605.1;transl_table=11 NZ_KK316828.1 RefSeq gene 589153 589389 . + . ID=gene-AL55_RS08320;Name=AL55_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08320;old_locus_tag=AL55_00518 NZ_KK316828.1 Protein Homology CDS 589153 589389 . + 0 ID=cds-WP_003402437.1;Parent=gene-AL55_RS08320;Dbxref=GenBank:WP_003402437.1;Name=WP_003402437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177624.1;locus_tag=AL55_RS08320;product=cell division/environmental response transcriptional regulator;protein_id=WP_003402437.1;transl_table=11 NZ_KK316828.1 RefSeq gene 589517 589618 . + . ID=gene-AL55_RS08325;Name=AL55_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08325;old_locus_tag=AL55_00519 NZ_KK316828.1 Protein Homology CDS 589517 589618 . + 0 ID=cds-WP_003402602.1;Parent=gene-AL55_RS08325;Dbxref=GenBank:WP_003402602.1;Name=WP_003402602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402602.1;locus_tag=AL55_RS08325;product=30S ribosomal protein bS22;protein_id=WP_003402602.1;transl_table=11 NZ_KK316828.1 RefSeq gene 589696 590826 . + . ID=gene-AL55_RS08330;Name=AL55_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08330;old_locus_tag=AL55_00520 NZ_KK316828.1 Protein Homology CDS 589696 590826 . + 0 ID=cds-WP_003402607.1;Parent=gene-AL55_RS08330;Dbxref=GenBank:WP_003402607.1;Name=WP_003402607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215050.2;locus_tag=AL55_RS08330;product=SDR family oxidoreductase;protein_id=WP_003402607.1;transl_table=11 NZ_KK316828.1 RefSeq gene 590833 591909 . + . ID=gene-AL55_RS08335;Name=AL55_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08335;old_locus_tag=AL55_00521 NZ_KK316828.1 Protein Homology CDS 590833 591909 . + 0 ID=cds-WP_003898486.1;Parent=gene-AL55_RS08335;Dbxref=GenBank:WP_003898486.1;Name=WP_003898486.1;Ontology_term=GO:0006644,GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid metabolic process|0006644||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215016.1;locus_tag=AL55_RS08335;product=lysophospholipid acyltransferase family protein;protein_id=WP_003898486.1;transl_table=11 NZ_KK316828.1 RefSeq gene 591913 592821 . - . ID=gene-AL55_RS08340;Name=cmaA2;gbkey=Gene;gene=cmaA2;gene_biotype=protein_coding;locus_tag=AL55_RS08340;old_locus_tag=AL55_00522 NZ_KK316828.1 Protein Homology CDS 591913 592821 . - 0 ID=cds-WP_003402621.1;Parent=gene-AL55_RS08340;Dbxref=GenBank:WP_003402621.1;Name=WP_003402621.1;gbkey=CDS;gene=cmaA2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215017.1;locus_tag=AL55_RS08340;product=cyclopropane mycolic acid synthase CmaA2;protein_id=WP_003402621.1;transl_table=11 NZ_KK316828.1 RefSeq gene 592844 593344 . - . ID=gene-AL55_RS08345;Name=AL55_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08345;old_locus_tag=AL55_00523 NZ_KK316828.1 Protein Homology CDS 592844 593344 . - 0 ID=cds-WP_003402626.1;Parent=gene-AL55_RS08345;Dbxref=GenBank:WP_003402626.1;Name=WP_003402626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215018.1;locus_tag=AL55_RS08345;product=FAS1-like dehydratase domain-containing protein;protein_id=WP_003402626.1;transl_table=11 NZ_KK316828.1 RefSeq gene 593506 594414 . - . ID=gene-AL55_RS08350;Name=AL55_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08350;old_locus_tag=AL55_00524 NZ_KK316828.1 Protein Homology CDS 593506 594414 . - 0 ID=cds-WP_369810419.1;Parent=gene-AL55_RS08350;Dbxref=GenBank:WP_369810419.1;Name=WP_369810419.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908888.1;locus_tag=AL55_RS08350;product=HAD family hydrolase;protein_id=WP_369810419.1;transl_table=11 NZ_KK316828.1 RefSeq gene 594801 595244 . + . ID=gene-AL55_RS08355;Name=AL55_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08355;old_locus_tag=AL55_00525 NZ_KK316828.1 Protein Homology CDS 594801 595244 . + 0 ID=cds-WP_003402688.1;Parent=gene-AL55_RS08355;Dbxref=GenBank:WP_003402688.1;Name=WP_003402688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215020.1;locus_tag=AL55_RS08355;product=MmpS family transport accessory protein;protein_id=WP_003402688.1;transl_table=11 NZ_KK316828.1 RefSeq gene 595241 598147 . + . ID=gene-AL55_RS08360;Name=mmpL2;gbkey=Gene;gene=mmpL2;gene_biotype=protein_coding;locus_tag=AL55_RS08360;old_locus_tag=AL55_00526 NZ_KK316828.1 Protein Homology CDS 595241 598147 . + 0 ID=cds-WP_003900161.1;Parent=gene-AL55_RS08360;Dbxref=GenBank:WP_003900161.1;Name=WP_003900161.1;gbkey=CDS;gene=mmpL2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215021.1;locus_tag=AL55_RS08360;product=RND transporter MmpL2;protein_id=WP_003900161.1;transl_table=11 NZ_KK316828.1 RefSeq gene 598140 598433 . + . ID=gene-AL55_RS08365;Name=AL55_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08365;old_locus_tag=AL55_00527 NZ_KK316828.1 Protein Homology CDS 598140 598433 . + 0 ID=cds-WP_003402695.1;Parent=gene-AL55_RS08365;Dbxref=GenBank:WP_003402695.1;Name=WP_003402695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215022.1;locus_tag=AL55_RS08365;product=glutaredoxin family protein;protein_id=WP_003402695.1;transl_table=11 NZ_KK316828.1 RefSeq gene 598483 599889 . + . ID=gene-AL55_RS08370;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=AL55_RS08370;old_locus_tag=AL55_00528 NZ_KK316828.1 Protein Homology CDS 598483 599889 . + 0 ID=cds-WP_003402699.1;Parent=gene-AL55_RS08370;Dbxref=GenBank:WP_003402699.1;Name=WP_003402699.1;Ontology_term=GO:0008883;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215023.1;locus_tag=AL55_RS08370;product=glutamyl-tRNA reductase;protein_id=WP_003402699.1;transl_table=11 NZ_KK316828.1 RefSeq gene 599899 600828 . + . ID=gene-AL55_RS08375;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AL55_RS08375;old_locus_tag=AL55_00529 NZ_KK316828.1 Protein Homology CDS 599899 600828 . + 0 ID=cds-WP_003402702.1;Parent=gene-AL55_RS08375;Dbxref=GenBank:WP_003402702.1;Name=WP_003402702.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215024.1;locus_tag=AL55_RS08375;product=hydroxymethylbilane synthase;protein_id=WP_003402702.1;transl_table=11 NZ_KK316828.1 RefSeq gene 600861 602558 . + . ID=gene-AL55_RS08380;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=AL55_RS08380;old_locus_tag=AL55_00530 NZ_KK316828.1 Protein Homology CDS 600861 602558 . + 0 ID=cds-WP_003900163.1;Parent=gene-AL55_RS08380;Dbxref=GenBank:WP_003900163.1;Name=WP_003900163.1;Ontology_term=GO:0033014,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177733.1;locus_tag=AL55_RS08380;product=bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase;protein_id=WP_003900163.1;transl_table=11 NZ_KK316828.1 RefSeq gene 602644 603633 . + . ID=gene-AL55_RS08385;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AL55_RS08385;old_locus_tag=AL55_00531 NZ_KK316828.1 Protein Homology CDS 602644 603633 . + 0 ID=cds-WP_003898491.1;Parent=gene-AL55_RS08385;Dbxref=GenBank:WP_003898491.1;Name=WP_003898491.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215026.1;locus_tag=AL55_RS08385;product=porphobilinogen synthase;protein_id=WP_003898491.1;transl_table=11 NZ_KK316828.1 RefSeq gene 603646 604194 . + . ID=gene-AL55_RS08390;Name=AL55_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08390;old_locus_tag=AL55_00532 NZ_KK316828.1 Protein Homology CDS 603646 604194 . + 0 ID=cds-WP_003402713.1;Parent=gene-AL55_RS08390;Dbxref=GenBank:WP_003402713.1;Name=WP_003402713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215027.1;locus_tag=AL55_RS08390;product=hypothetical protein;protein_id=WP_003402713.1;transl_table=11 NZ_KK316828.1 RefSeq gene 604191 604490 . + . ID=gene-AL55_RS08395;Name=AL55_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08395;old_locus_tag=AL55_00533 NZ_KK316828.1 Protein Homology CDS 604191 604490 . + 0 ID=cds-WP_003402715.1;Parent=gene-AL55_RS08395;Dbxref=GenBank:WP_003402715.1;Name=WP_003402715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215028.1;locus_tag=AL55_RS08395;product=hypothetical protein;protein_id=WP_003402715.1;transl_table=11 NZ_KK316828.1 RefSeq gene 604569 606104 . + . ID=gene-AL55_RS08400;Name=AL55_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08400;old_locus_tag=AL55_00534 NZ_KK316828.1 Protein Homology CDS 604569 606104 . + 0 ID=cds-WP_003900122.1;Parent=gene-AL55_RS08400;Dbxref=GenBank:WP_003900122.1;Name=WP_003900122.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287795.1;locus_tag=AL55_RS08400;product=HNH endonuclease signature motif containing protein;protein_id=WP_003900122.1;transl_table=11 NZ_KK316828.1 RefSeq gene 606101 606577 . - . ID=gene-AL55_RS08405;Name=oprA;gbkey=Gene;gene=oprA;gene_biotype=protein_coding;locus_tag=AL55_RS08405;old_locus_tag=AL55_00535 NZ_KK316828.1 Protein Homology CDS 606101 606577 . - 0 ID=cds-WP_003402807.1;Parent=gene-AL55_RS08405;Dbxref=GenBank:WP_003402807.1;Name=WP_003402807.1;gbkey=CDS;gene=oprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215030.1;locus_tag=AL55_RS08405;product=osmosensory protein OprA;protein_id=WP_003402807.1;transl_table=11 NZ_KK316828.1 RefSeq gene 606866 608098 . + . ID=gene-AL55_RS08410;Name=AL55_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08410;old_locus_tag=AL55_00536 NZ_KK316828.1 Protein Homology CDS 606866 608098 . + 0 ID=cds-WP_003916685.1;Parent=gene-AL55_RS08410;Dbxref=GenBank:WP_003916685.1;Name=WP_003916685.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873687.1;locus_tag=AL55_RS08410;product=acyltransferase family protein;protein_id=WP_003916685.1;transl_table=11 NZ_KK316828.1 RefSeq gene 608230 608925 . + . ID=gene-AL55_RS08415;Name=AL55_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08415;old_locus_tag=AL55_00537 NZ_KK316828.1 Protein Homology CDS 608230 608925 . + 0 ID=cds-WP_003402818.1;Parent=gene-AL55_RS08415;Dbxref=GenBank:WP_003402818.1;Name=WP_003402818.1;Ontology_term=GO:0016042,GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215032.1;locus_tag=AL55_RS08415;product=Rv0518 family GDSL lipase;protein_id=WP_003402818.1;transl_table=11 NZ_KK316828.1 RefSeq gene 609214 610071 . - . ID=gene-AL55_RS08420;Name=AL55_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08420;old_locus_tag=AL55_00538 NZ_KK316828.1 Protein Homology CDS 609214 610071 . - 0 ID=cds-WP_003912593.1;Parent=gene-AL55_RS08420;Dbxref=GenBank:WP_003912593.1;Name=WP_003912593.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912593.1;locus_tag=AL55_RS08420;product=alpha/beta hydrolase;protein_id=WP_003912593.1;transl_table=11 NZ_KK316828.1 RefSeq gene 610336 610647 . + . ID=gene-AL55_RS08425;Name=AL55_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08425;old_locus_tag=AL55_00539 NZ_KK316828.1 Protein Homology CDS 610336 610647 . + 0 ID=cds-WP_014585060.1;Parent=gene-AL55_RS08425;Dbxref=GenBank:WP_014585060.1;Name=WP_014585060.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF019846.6;locus_tag=AL55_RS08425;product=class I SAM-dependent methyltransferase;protein_id=WP_014585060.1;transl_table=11 NZ_KK316828.1 RefSeq gene 610640 610945 . + . ID=gene-AL55_RS08430;Name=AL55_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08430;old_locus_tag=AL55_00540 NZ_KK316828.1 Protein Homology CDS 610640 610945 . + 0 ID=cds-WP_003898493.1;Parent=gene-AL55_RS08430;Dbxref=GenBank:WP_003898493.1;Name=WP_003898493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402835.1;locus_tag=AL55_RS08430;product=hypothetical protein;protein_id=WP_003898493.1;transl_table=11 NZ_KK316828.1 RefSeq gene 610999 612384 . + . ID=gene-AL55_RS08435;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=AL55_RS08435;old_locus_tag=AL55_00541 NZ_KK316828.1 Protein Homology CDS 610999 612384 . + 0 ID=cds-WP_003911231.1;Parent=gene-AL55_RS08435;Dbxref=GenBank:WP_003911231.1;Name=WP_003911231.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911231.1;locus_tag=AL55_RS08435;product=amino acid permease;protein_id=WP_003911231.1;transl_table=11 NZ_KK316828.1 RefSeq gene 612368 612763 . - . ID=gene-AL55_RS08440;Name=AL55_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08440;old_locus_tag=AL55_00542 NZ_KK316828.1 Protein Homology CDS 612368 612763 . - 0 ID=cds-WP_003402842.1;Parent=gene-AL55_RS08440;Dbxref=GenBank:WP_003402842.1;Name=WP_003402842.1;Ontology_term=GO:0003824,GO:0070967;gbkey=CDS;go_function=catalytic activity|0003824||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215037.1;locus_tag=AL55_RS08440;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003402842.1;transl_table=11 NZ_KK316828.1 RefSeq gene 612877 614265 . + . ID=gene-AL55_RS08445;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AL55_RS08445;old_locus_tag=AL55_00543 NZ_KK316828.1 Protein Homology CDS 612877 614265 . + 0 ID=cds-WP_003402844.1;Parent=gene-AL55_RS08445;Dbxref=GenBank:WP_003402844.1;Name=WP_003402844.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215038.1;locus_tag=AL55_RS08445;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_003402844.1;transl_table=11 NZ_KK316828.1 RefSeq gene 614265 614873 . + . ID=gene-AL55_RS08450;Name=AL55_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08450;old_locus_tag=AL55_00544 NZ_KK316828.1 Protein Homology CDS 614265 614873 . + 0 ID=cds-WP_003402845.1;Parent=gene-AL55_RS08450;Dbxref=GenBank:WP_003402845.1;Name=WP_003402845.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215039.1;locus_tag=AL55_RS08450;product=histidine phosphatase family protein;protein_id=WP_003402845.1;transl_table=11 NZ_KK316828.1 RefSeq gene 614927 615538 . + . ID=gene-AL55_RS08455;Name=AL55_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08455;old_locus_tag=AL55_00545 NZ_KK316828.1 Protein Homology CDS 614927 615538 . + 0 ID=cds-WP_003911234.1;Parent=gene-AL55_RS08455;Dbxref=GenBank:WP_003911234.1;Name=WP_003911234.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911234.1;locus_tag=AL55_RS08455;product=TlpA disulfide reductase family protein;protein_id=WP_003911234.1;transl_table=11 NZ_KK316828.1 RefSeq gene 615535 616314 . + . ID=gene-AL55_RS08460;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=AL55_RS08460;old_locus_tag=AL55_00546 NZ_KK316828.1 Protein Homology CDS 615535 616314 . + 0 ID=cds-WP_003402847.1;Parent=gene-AL55_RS08460;Dbxref=GenBank:WP_003402847.1;Name=WP_003402847.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;gene=ccdA;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177735.1;locus_tag=AL55_RS08460;product=cytochrome c biogenesis CcdA family protein;protein_id=WP_003402847.1;transl_table=11 NZ_KK316828.1 RefSeq gene 616347 617936 . + . ID=gene-AL55_RS08465;Name=resB;gbkey=Gene;gene=resB;gene_biotype=protein_coding;locus_tag=AL55_RS08465;old_locus_tag=AL55_00547 NZ_KK316828.1 Protein Homology CDS 616347 617936 . + 0 ID=cds-WP_003402848.1;Parent=gene-AL55_RS08465;Dbxref=GenBank:WP_003402848.1;Name=WP_003402848.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;gene=resB;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215042.1;locus_tag=AL55_RS08465;product=cytochrome c biogenesis protein ResB;protein_id=WP_003402848.1;transl_table=11 NZ_KK316828.1 RefSeq gene 617933 618907 . + . ID=gene-AL55_RS08470;Name=ccsB;gbkey=Gene;gene=ccsB;gene_biotype=protein_coding;locus_tag=AL55_RS08470;old_locus_tag=AL55_00548 NZ_KK316828.1 Protein Homology CDS 617933 618907 . + 0 ID=cds-WP_003905331.1;Parent=gene-AL55_RS08470;Dbxref=GenBank:WP_003905331.1;Name=WP_003905331.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsB;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215041.2;locus_tag=AL55_RS08470;product=c-type cytochrome biogenesis protein CcsB;protein_id=WP_003905331.1;transl_table=11 NZ_KK316828.1 RefSeq gene 618949 620166 . + . ID=gene-AL55_RS08475;Name=AL55_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08475;old_locus_tag=AL55_00549 NZ_KK316828.1 Protein Homology CDS 618949 620166 . + 0 ID=cds-WP_003910801.1;Parent=gene-AL55_RS08475;Dbxref=GenBank:WP_003910801.1;Name=WP_003910801.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215044.1;locus_tag=AL55_RS08475;product=MinD/ParA family ATP-binding protein;protein_id=WP_003910801.1;transl_table=11 NZ_KK316828.1 RefSeq gene 620163 620324 . - . ID=gene-AL55_RS08480;Name=AL55_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08480;old_locus_tag=AL55_00550 NZ_KK316828.1 Protein Homology CDS 620163 620324 . - 0 ID=cds-WP_003402851.1;Parent=gene-AL55_RS08480;Dbxref=GenBank:WP_003402851.1;Name=WP_003402851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409181.1;locus_tag=AL55_RS08480;product=hypothetical protein;protein_id=WP_003402851.1;transl_table=11 NZ_KK316828.1 RefSeq gene 620371 620688 . + . ID=gene-AL55_RS08485;Name=AL55_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08485;old_locus_tag=AL55_00551 NZ_KK316828.1 Protein Homology CDS 620371 620688 . + 0 ID=cds-WP_003402853.1;Parent=gene-AL55_RS08485;Dbxref=GenBank:WP_003402853.1;Name=WP_003402853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215045.1;locus_tag=AL55_RS08485;product=DUF4229 domain-containing protein;protein_id=WP_003402853.1;transl_table=11 NZ_KK316828.1 RefSeq gene 620835 622703 . + . ID=gene-AL55_RS08490;Name=AL55_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08490;old_locus_tag=AL55_00552 NZ_KK316828.1 Protein Homology CDS 620835 622703 . + 0 ID=cds-WP_034166960.1;Parent=gene-AL55_RS08490;Dbxref=GenBank:WP_034166960.1;Name=WP_034166960.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177736.1;locus_tag=AL55_RS08490;product=PE family protein;protein_id=WP_034166960.1;transl_table=11 NZ_KK316828.1 RefSeq gene 622599 623606 . - . ID=gene-AL55_RS08495;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=AL55_RS08495;old_locus_tag=AL55_00553 NZ_KK316828.1 Protein Homology CDS 622599 623606 . - 0 ID=cds-WP_003402861.1;Parent=gene-AL55_RS08495;Dbxref=GenBank:WP_003402861.1;Name=WP_003402861.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabH;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215047.1;locus_tag=AL55_RS08495;product=beta-ketoacyl-ACP synthase III;protein_id=WP_003402861.1;transl_table=11 NZ_KK316828.1 RefSeq gene 623688 624566 . - . ID=gene-AL55_RS08500;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=AL55_RS08500;old_locus_tag=AL55_00554 NZ_KK316828.1 Protein Homology CDS 623688 624566 . - 0 ID=cds-WP_003402865.1;Parent=gene-AL55_RS08500;Dbxref=GenBank:WP_003402865.1;Name=WP_003402865.1;Ontology_term=GO:0009234,GO:0046428,GO:0016020;gbkey=CDS;gene=menA;go_component=membrane|0016020||IEA;go_function=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215048.1;locus_tag=AL55_RS08500;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_003402865.1;transl_table=11 NZ_KK316828.1 RefSeq gene 624601 625377 . + . ID=gene-AL55_RS08505;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=AL55_RS08505;old_locus_tag=AL55_00555 NZ_KK316828.1 Protein Homology CDS 624601 625377 . + 0 ID=cds-WP_003911222.1;Parent=gene-AL55_RS08505;Dbxref=GenBank:WP_003911222.1;Name=WP_003911222.1;Ontology_term=GO:0009116,GO:0017061;gbkey=CDS;gene=pnp;go_function=S-methyl-5-thioadenosine phosphorylase activity|0017061||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009934924.1;locus_tag=AL55_RS08505;product=S-methyl-5'-thioadenosine phosphorylase;protein_id=WP_003911222.1;transl_table=11 NZ_KK316828.1 RefSeq gene 625374 626414 . + . ID=gene-AL55_RS08510;Name=AL55_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08510;old_locus_tag=AL55_00556 NZ_KK316828.1 Protein Homology CDS 625374 626414 . + 0 ID=cds-WP_003901872.1;Parent=gene-AL55_RS08510;Dbxref=GenBank:WP_003901872.1;Name=WP_003901872.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177737.1;locus_tag=AL55_RS08510;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003901872.1;transl_table=11 NZ_KK316828.1 RefSeq gene 626424 627857 . - . ID=gene-AL55_RS08515;Name=AL55_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08515;old_locus_tag=AL55_00557 NZ_KK316828.1 Protein Homology CDS 626424 627857 . - 0 ID=cds-WP_003900954.1;Parent=gene-AL55_RS08515;Dbxref=GenBank:WP_003900954.1;Name=WP_003900954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215051.1;locus_tag=AL55_RS08515;product=DUF7937 domain-containing protein;protein_id=WP_003900954.1;transl_table=11 NZ_KK316828.1 RefSeq gene 628166 629812 . + . ID=gene-AL55_RS08520;Name=AL55_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08520;old_locus_tag=AL55_00558 NZ_KK316828.1 Protein Homology CDS 628166 629812 . + 0 ID=cds-WP_003900169.1;Parent=gene-AL55_RS08520;Dbxref=GenBank:WP_003900169.1;Name=WP_003900169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215052.1;locus_tag=AL55_RS08520;product=DUF7159 family protein;protein_id=WP_003900169.1;transl_table=11 NZ_KK316828.1 RefSeq gene 629845 630501 . + . ID=gene-AL55_RS08525;Name=AL55_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08525;old_locus_tag=AL55_00559 NZ_KK316828.1 Protein Homology CDS 629845 630501 . + 0 ID=cds-WP_003898499.1;Parent=gene-AL55_RS08525;Dbxref=GenBank:WP_003898499.1;Name=WP_003898499.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898499.1;locus_tag=AL55_RS08525;product=glycosyltransferase family 2 protein;protein_id=WP_003898499.1;transl_table=11 NZ_KK316828.1 RefSeq gene 630498 631160 . + . ID=gene-AL55_RS08530;Name=AL55_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08530;old_locus_tag=AL55_00560 NZ_KK316828.1 Protein Homology CDS 630498 631160 . + 0 ID=cds-WP_003402886.1;Parent=gene-AL55_RS08530;Dbxref=GenBank:WP_003402886.1;Name=WP_003402886.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215054.1;locus_tag=AL55_RS08530;product=TIGR04282 family arsenosugar biosynthesis glycosyltransferase;protein_id=WP_003402886.1;transl_table=11 NZ_KK316828.1 RefSeq gene 631181 632530 . - . ID=gene-AL55_RS08535;Name=AL55_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08535;old_locus_tag=AL55_00561 NZ_KK316828.1 Protein Homology CDS 631181 632530 . - 0 ID=cds-WP_003402890.1;Parent=gene-AL55_RS08535;Dbxref=GenBank:WP_003402890.1;Name=WP_003402890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215055.1;locus_tag=AL55_RS08535;product=integral membrane protein;protein_id=WP_003402890.1;transl_table=11 NZ_KK316828.1 RefSeq gene 632542 633630 . - . ID=gene-AL55_RS08540;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=AL55_RS08540;old_locus_tag=AL55_00562 NZ_KK316828.1 Protein Homology CDS 632542 633630 . - 0 ID=cds-WP_003402892.1;Parent=gene-AL55_RS08540;Dbxref=GenBank:WP_003402892.1;Name=WP_003402892.1;gbkey=CDS;gene=menE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215056.1;locus_tag=AL55_RS08540;product=o-succinylbenzoate--CoA ligase;protein_id=WP_003402892.1;transl_table=11 NZ_KK316828.1 RefSeq gene 633699 634001 . - . ID=gene-AL55_RS08545;Name=AL55_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08545;old_locus_tag=AL55_00563 NZ_KK316828.1 Protein Homology CDS 633699 634001 . - 0 ID=cds-WP_003402896.1;Parent=gene-AL55_RS08545;Dbxref=GenBank:WP_003402896.1;Name=WP_003402896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215057.1;locus_tag=AL55_RS08545;product=DUF3349 domain-containing protein;protein_id=WP_003402896.1;transl_table=11 NZ_KK316828.1 RefSeq gene 634061 634339 . - . ID=gene-AL55_RS08550;Name=AL55_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08550;old_locus_tag=AL55_00564 NZ_KK316828.1 Protein Homology CDS 634061 634339 . - 0 ID=cds-WP_003402901.1;Parent=gene-AL55_RS08550;Dbxref=GenBank:WP_003402901.1;Name=WP_003402901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215058.1;locus_tag=AL55_RS08550;product=hypothetical protein;protein_id=WP_003402901.1;transl_table=11 NZ_KK316828.1 RefSeq gene 634336 635589 . - . ID=gene-AL55_RS08555;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=AL55_RS08555;old_locus_tag=AL55_00565 NZ_KK316828.1 Protein Homology CDS 634336 635589 . - 0 ID=cds-WP_003402904.1;Parent=gene-AL55_RS08555;Dbxref=GenBank:WP_003402904.1;Name=WP_003402904.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;gene=pitA;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215059.1;locus_tag=AL55_RS08555;product=inorganic phosphate transporter;protein_id=WP_003402904.1;transl_table=11 NZ_KK316828.1 RefSeq gene 635709 636095 . - . ID=gene-AL55_RS08560;Name=AL55_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08560;old_locus_tag=AL55_00566 NZ_KK316828.1 Protein Homology CDS 635709 636095 . - 0 ID=cds-WP_003402907.1;Parent=gene-AL55_RS08560;Dbxref=GenBank:WP_003402907.1;Name=WP_003402907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215060.1;locus_tag=AL55_RS08560;product=VOC family protein;protein_id=WP_003402907.1;transl_table=11 NZ_KK316828.1 RefSeq gene 636158 637042 . - . ID=gene-AL55_RS08565;Name=AL55_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08565;old_locus_tag=AL55_00567 NZ_KK316828.1 Protein Homology CDS 636158 637042 . - 0 ID=cds-WP_003402909.1;Parent=gene-AL55_RS08565;Dbxref=GenBank:WP_003402909.1;Name=WP_003402909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215061.1;locus_tag=AL55_RS08565;product=SDR family oxidoreductase;protein_id=WP_003402909.1;transl_table=11 NZ_KK316828.1 RefSeq gene 637138 638040 . - . ID=gene-AL55_RS08570;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=AL55_RS08570;old_locus_tag=AL55_00568 NZ_KK316828.1 Protein Homology CDS 637138 638040 . - 0 ID=cds-WP_003915439.1;Parent=gene-AL55_RS08570;Dbxref=GenBank:WP_003915439.1;Name=WP_003915439.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020727493.1;locus_tag=AL55_RS08570;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_003915439.1;transl_table=11 NZ_KK316828.1 RefSeq gene 638354 638767 . - . ID=gene-AL55_RS08575;Name=AL55_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08575;old_locus_tag=AL55_00569 NZ_KK316828.1 Protein Homology CDS 638354 638767 . - 0 ID=cds-WP_003898500.1;Parent=gene-AL55_RS08575;Dbxref=GenBank:WP_003898500.1;Name=WP_003898500.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215063.1;locus_tag=AL55_RS08575;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003898500.1;transl_table=11 NZ_KK316828.1 RefSeq gene 638764 639030 . - . ID=gene-AL55_RS08580;Name=AL55_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08580;old_locus_tag=AL55_00570 NZ_KK316828.1 Protein Homology CDS 638764 639030 . - 0 ID=cds-WP_003402915.1;Parent=gene-AL55_RS08580;Dbxref=GenBank:WP_003402915.1;Name=WP_003402915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215064.1;locus_tag=AL55_RS08580;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_003402915.1;transl_table=11 NZ_KK316828.1 RefSeq gene 639222 640937 . - . ID=gene-AL55_RS08585;Name=fadD8;gbkey=Gene;gene=fadD8;gene_biotype=protein_coding;locus_tag=AL55_RS08585;old_locus_tag=AL55_00571 NZ_KK316828.1 Protein Homology CDS 639222 640937 . - 0 ID=cds-WP_003402917.1;Parent=gene-AL55_RS08585;Dbxref=GenBank:WP_003402917.1;Name=WP_003402917.1;gbkey=CDS;gene=fadD8;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=AL55_RS08585;product=fatty-acid--CoA ligase FadD8;protein_id=WP_003402917.1;transl_table=11 NZ_KK316828.1 RefSeq gene 641015 642619 . + . ID=gene-AL55_RS08590;Name=AL55_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08590;old_locus_tag=AL55_00572 NZ_KK316828.1 Protein Homology CDS 641015 642619 . + 0 ID=cds-WP_003402920.1;Parent=gene-AL55_RS08590;Dbxref=GenBank:WP_003402920.1;Name=WP_003402920.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215066.1;locus_tag=AL55_RS08590;product=amidohydrolase;protein_id=WP_003402920.1;transl_table=11 NZ_KK316828.1 RefSeq gene 642616 643596 . + . ID=gene-AL55_RS08595;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=AL55_RS08595;old_locus_tag=AL55_00573 NZ_KK316828.1 Protein Homology CDS 642616 643596 . + 0 ID=cds-WP_003402923.1;Parent=gene-AL55_RS08595;Dbxref=GenBank:WP_003402923.1;Name=WP_003402923.1;gbkey=CDS;gene=menC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215067.1;locus_tag=AL55_RS08595;product=o-succinylbenzoate synthase;protein_id=WP_003402923.1;transl_table=11 NZ_KK316828.1 RefSeq gene 643593 644381 . + . ID=gene-AL55_RS08600;Name=bpoC;gbkey=Gene;gene=bpoC;gene_biotype=protein_coding;locus_tag=AL55_RS08600;old_locus_tag=AL55_00574 NZ_KK316828.1 Protein Homology CDS 643593 644381 . + 0 ID=cds-WP_003402925.1;Parent=gene-AL55_RS08600;Dbxref=GenBank:WP_003402925.1;Name=WP_003402925.1;gbkey=CDS;gene=bpoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215068.1;locus_tag=AL55_RS08600;product=alpha/beta fold hydrolase;protein_id=WP_003402925.1;transl_table=11 NZ_KK316828.1 RefSeq gene 644424 646088 . + . ID=gene-AL55_RS08605;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=AL55_RS08605;old_locus_tag=AL55_00575 NZ_KK316828.1 Protein Homology CDS 644424 646088 . + 0 ID=cds-WP_003402927.1;Parent=gene-AL55_RS08605;Dbxref=GenBank:WP_003402927.1;Name=WP_003402927.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215069.1;locus_tag=AL55_RS08605;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_003402927.1;transl_table=11 NZ_KK316828.1 RefSeq gene 646085 646600 . + . ID=gene-AL55_RS08610;Name=AL55_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08610;old_locus_tag=AL55_00576 NZ_KK316828.1 Protein Homology CDS 646085 646600 . + 0 ID=cds-WP_003402929.1;Parent=gene-AL55_RS08610;Dbxref=GenBank:WP_003402929.1;Name=WP_003402929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215070.1;locus_tag=AL55_RS08610;product=DUF3592 domain-containing protein;protein_id=WP_003402929.1;transl_table=11 NZ_KK316828.1 RefSeq gene 646671 647798 . + . ID=gene-AL55_RS08615;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=AL55_RS08615;old_locus_tag=AL55_00577 NZ_KK316828.1 Protein Homology CDS 646671 647798 . + 0 ID=cds-WP_003898502.1;Parent=gene-AL55_RS08615;Dbxref=GenBank:WP_003898502.1;Name=WP_003898502.1;gbkey=CDS;gene=mgtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912598.1;locus_tag=AL55_RS08615;product=GDP-mannose-dependent alpha-mannosyltransferase;protein_id=WP_003898502.1;transl_table=11 NZ_KK316828.1 RefSeq gene 647815 648519 . + . ID=gene-AL55_RS08620;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=AL55_RS08620;old_locus_tag=AL55_00578 NZ_KK316828.1 Protein Homology CDS 647815 648519 . + 0 ID=cds-WP_003402936.1;Parent=gene-AL55_RS08620;Dbxref=GenBank:WP_003402936.1;Name=WP_003402936.1;Ontology_term=GO:0008168;gbkey=CDS;gene=menH;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177738.1;locus_tag=AL55_RS08620;product=demethylmenaquinone methyltransferase;protein_id=WP_003402936.1;transl_table=11 NZ_KK316828.1 RefSeq gene 648533 648871 . - . ID=gene-AL55_RS08625;Name=AL55_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08625;old_locus_tag=AL55_00579 NZ_KK316828.1 Protein Homology CDS 648533 648871 . - 0 ID=cds-WP_003402937.1;Parent=gene-AL55_RS08625;Dbxref=GenBank:WP_003402937.1;Name=WP_003402937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215073.1;locus_tag=AL55_RS08625;product=DUF732 domain-containing protein;protein_id=WP_003402937.1;transl_table=11 NZ_KK316828.1 RefSeq gene 648905 649582 . - . ID=gene-AL55_RS08630;Name=AL55_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08630;old_locus_tag=AL55_00580 NZ_KK316828.1 Protein Homology CDS 648905 649582 . - 0 ID=cds-WP_003911240.1;Parent=gene-AL55_RS08630;Dbxref=GenBank:WP_003911240.1;Name=WP_003911240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911240.1;locus_tag=AL55_RS08630;product=benzoquinone methyltransferase;protein_id=WP_003911240.1;transl_table=11 NZ_KK316828.1 RefSeq gene 649655 650881 . - . ID=gene-AL55_RS08635;Name=menJ;gbkey=Gene;gene=menJ;gene_biotype=protein_coding;locus_tag=AL55_RS08635;old_locus_tag=AL55_00581 NZ_KK316828.1 Protein Homology CDS 649655 650881 . - 0 ID=cds-WP_003402939.1;Parent=gene-AL55_RS08635;Dbxref=GenBank:WP_003402939.1;Name=WP_003402939.1;Ontology_term=GO:0009234,GO:0016627,GO:0016628;gbkey=CDS;gene=menJ;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215075.1;locus_tag=AL55_RS08635;product=menaquinone reductase;protein_id=WP_003402939.1;transl_table=11 NZ_KK316828.1 RefSeq gene 650897 651904 . + . ID=gene-AL55_RS08640;Name=grcC;gbkey=Gene;gene=grcC;gene_biotype=protein_coding;locus_tag=AL55_RS08640;old_locus_tag=AL55_00582 NZ_KK316828.1 Protein Homology CDS 650897 651904 . + 0 ID=cds-WP_003402957.1;Parent=gene-AL55_RS08640;Dbxref=GenBank:WP_003402957.1;Name=WP_003402957.1;gbkey=CDS;gene=grcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215076.1;locus_tag=AL55_RS08640;product=polyprenyl-diphosphate synthase GrcC;protein_id=WP_003402957.1;transl_table=11 NZ_KK316828.1 RefSeq gene 652005 652865 . + . ID=gene-AL55_RS08645;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AL55_RS08645;old_locus_tag=AL55_00583 NZ_KK316828.1 Protein Homology CDS 652005 652865 . + 0 ID=cds-WP_003402959.1;Parent=gene-AL55_RS08645;Dbxref=GenBank:WP_003402959.1;Name=WP_003402959.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215077.1;locus_tag=AL55_RS08645;product=zinc metalloprotease HtpX;protein_id=WP_003402959.1;transl_table=11 NZ_KK316828.1 RefSeq gene 653050 654075 . - . ID=gene-AL55_RS08650;Name=AL55_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08650;old_locus_tag=AL55_00584 NZ_KK316828.1 Protein Homology CDS 653050 654075 . - 0 ID=cds-WP_003900965.1;Parent=gene-AL55_RS08650;Dbxref=GenBank:WP_003900965.1;Name=WP_003900965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215078.1;locus_tag=AL55_RS08650;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_003900965.1;transl_table=11 NZ_KK316828.1 RefSeq gene 654136 655596 . - . ID=gene-AL55_RS08655;Name=AL55_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08655;old_locus_tag=AL55_00585 NZ_KK316828.1 Protein Homology CDS 654136 655596 . - 0 ID=cds-WP_003900966.1;Parent=gene-AL55_RS08655;Dbxref=GenBank:WP_003900966.1;Name=WP_003900966.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215079.1;locus_tag=AL55_RS08655;product=flavin-containing monooxygenase;protein_id=WP_003900966.1;transl_table=11 NZ_KK316828.1 RefSeq gene 655674 656165 . - . ID=gene-AL55_RS08660;Name=AL55_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08660;old_locus_tag=AL55_00586 NZ_KK316828.1 Protein Homology CDS 655674 656165 . - 0 ID=cds-WP_003402987.1;Parent=gene-AL55_RS08660;Dbxref=GenBank:WP_003402987.1;Name=WP_003402987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215080.1;locus_tag=AL55_RS08660;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_003402987.1;transl_table=11 NZ_KK316828.1 RefSeq gene 656235 656318 . + . ID=gene-AL55_RS08665;Name=AL55_RS08665;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS08665;old_locus_tag=AL55_00587 NZ_KK316828.1 tRNAscan-SE tRNA 656235 656318 . + . ID=rna-AL55_RS08665;Parent=gene-AL55_RS08665;anticodon=(pos:656269..656271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS08665;product=tRNA-Tyr NZ_KK316828.1 tRNAscan-SE exon 656235 656318 . + . ID=exon-AL55_RS08665-1;Parent=rna-AL55_RS08665;anticodon=(pos:656269..656271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS08665;product=tRNA-Tyr NZ_KK316828.1 RefSeq gene 656447 657466 . + . ID=gene-AL55_RS08670;Name=AL55_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08670;old_locus_tag=AL55_00588 NZ_KK316828.1 Protein Homology CDS 656447 657466 . + 0 ID=cds-WP_003900173.1;Parent=gene-AL55_RS08670;Dbxref=GenBank:WP_003900173.1;Name=WP_003900173.1;Ontology_term=GO:0008171;gbkey=CDS;go_function=O-methyltransferase activity|0008171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215081.1;locus_tag=AL55_RS08670;product=methyltransferase;protein_id=WP_003900173.1;transl_table=11 NZ_KK316828.1 RefSeq gene 657576 658994 . + . ID=gene-AL55_RS08675;Name=AL55_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08675;old_locus_tag=AL55_00589 NZ_KK316828.1 Protein Homology CDS 657576 658994 . + 0 ID=cds-WP_003402992.1;Parent=gene-AL55_RS08675;Dbxref=GenBank:WP_003402992.1;Name=WP_003402992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215082.1;locus_tag=AL55_RS08675;product=cytochrome P450;protein_id=WP_003402992.1;transl_table=11 NZ_KK316828.1 RefSeq gene 659129 659395 . + . ID=gene-AL55_RS08680;Name=AL55_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08680;old_locus_tag=AL55_00590 NZ_KK316828.1 Protein Homology CDS 659129 659395 . + 0 ID=cds-WP_003402995.1;Parent=gene-AL55_RS08680;Dbxref=GenBank:WP_003402995.1;Name=WP_003402995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215083.1;locus_tag=AL55_RS08680;product=DUF1918 domain-containing protein;protein_id=WP_003402995.1;transl_table=11 NZ_KK316828.1 RefSeq gene 659421 661499 . + . ID=gene-AL55_RS08685;Name=nrdZ;gbkey=Gene;gene=nrdZ;gene_biotype=protein_coding;locus_tag=AL55_RS08685;old_locus_tag=AL55_00591 NZ_KK316828.1 Protein Homology CDS 659421 661499 . + 0 ID=cds-WP_003402998.1;Parent=gene-AL55_RS08685;Dbxref=GenBank:WP_003402998.1;Name=WP_003402998.1;Ontology_term=GO:0000166,GO:0004748,GO:0031419;gbkey=CDS;gene=nrdZ;go_function=nucleotide binding|0000166||IEA,ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215084.1;locus_tag=AL55_RS08685;product=adenosylcobalamin-dependent ribonucleoside-diphosphate reductase;protein_id=WP_003402998.1;transl_table=11 NZ_KK316828.1 RefSeq gene 661613 662944 . - . ID=gene-AL55_RS08690;Name=AL55_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08690;old_locus_tag=AL55_00592 NZ_KK316828.1 Protein Homology CDS 661613 662944 . - 0 ID=cds-WP_003403001.1;Parent=gene-AL55_RS08690;Dbxref=GenBank:WP_003403001.1;Name=WP_003403001.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215085.1;locus_tag=AL55_RS08690;product=phosphoribosyltransferase family protein;protein_id=WP_003403001.1;transl_table=11 NZ_KK316828.1 RefSeq gene 663168 663509 . - . ID=gene-AL55_RS08695;Name=AL55_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08695;old_locus_tag=AL55_00593 NZ_KK316828.1 Protein Homology CDS 663168 663509 . - 0 ID=cds-WP_003898507.1;Parent=gene-AL55_RS08695;Dbxref=GenBank:WP_003898507.1;Name=WP_003898507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215086.1;locus_tag=AL55_RS08695;product=hypothetical protein;protein_id=WP_003898507.1;transl_table=11 NZ_KK316828.1 RefSeq gene 663977 665368 . - . ID=gene-AL55_RS08700;Name=AL55_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08700;old_locus_tag=AL55_00594 NZ_KK316828.1 Protein Homology CDS 663977 665368 . - 0 ID=cds-WP_003403007.1;Parent=gene-AL55_RS08700;Dbxref=GenBank:WP_003403007.1;Name=WP_003403007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215087.1;locus_tag=AL55_RS08700;product=nicotinate phosphoribosyltransferase;protein_id=WP_003403007.1;transl_table=11 NZ_KK316828.1 RefSeq gene 665378 666520 . - . ID=gene-AL55_RS08705;Name=AL55_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08705;old_locus_tag=AL55_00595 NZ_KK316828.1 Protein Homology CDS 665378 666520 . - 0 ID=cds-WP_003403008.1;Parent=gene-AL55_RS08705;Dbxref=GenBank:WP_003403008.1;Name=WP_003403008.1;Ontology_term=GO:0045227,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215088.1;locus_tag=AL55_RS08705;product=CapA family protein;protein_id=WP_003403008.1;transl_table=11 NZ_KK316828.1 RefSeq gene 666705 667871 . - . ID=gene-AL55_RS08710;Name=AL55_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08710;old_locus_tag=AL55_00596 NZ_KK316828.1 Protein Homology CDS 666705 667871 . - 0 ID=cds-WP_003905341.1;Parent=gene-AL55_RS08710;Dbxref=GenBank:WP_003905341.1;Name=WP_003905341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215089.1;locus_tag=AL55_RS08710;product=FAD-binding domain;protein_id=WP_003905341.1;transl_table=11 NZ_KK316828.1 RefSeq gene 667974 669278 . + . ID=gene-AL55_RS0104245;Name=AL55_RS0104245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104245;old_locus_tag=AL55_00597 NZ_KK316828.1 Protein Homology CDS 667974 669278 . + 0 ID=cds-WP_003403011.1;Parent=gene-AL55_RS0104245;Dbxref=GenBank:WP_003403011.1;Name=WP_003403011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215090.1;locus_tag=AL55_RS0104245;product=TIGR03086 family metal-binding protein;protein_id=WP_003403011.1;transl_table=11 NZ_KK316828.1 RefSeq gene 669292 670077 . + . ID=gene-AL55_RS08715;Name=AL55_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08715;old_locus_tag=AL55_00598 NZ_KK316828.1 Protein Homology CDS 669292 670077 . + 0 ID=cds-WP_003403012.1;Parent=gene-AL55_RS08715;Dbxref=GenBank:WP_003403012.1;Name=WP_003403012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215091.1;locus_tag=AL55_RS08715;product=VOC family protein;protein_id=WP_003403012.1;transl_table=11 NZ_KK316828.1 RefSeq gene 670122 674036 . - . ID=gene-AL55_RS08720;Name=AL55_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08720;old_locus_tag=AL55_00599 NZ_KK316828.1 Protein Homology CDS 670122 674036 . - 0 ID=cds-WP_025202584.1;Parent=gene-AL55_RS08720;Dbxref=GenBank:WP_025202584.1;Name=WP_025202584.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177739.1;locus_tag=AL55_RS08720;product=PE family protein;protein_id=WP_025202584.1;transl_table=11 NZ_KK316828.1 RefSeq gene 674358 675116 . + . ID=gene-AL55_RS08725;Name=AL55_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08725;old_locus_tag=AL55_00600 NZ_KK316828.1 Protein Homology CDS 674358 675116 . + 0 ID=cds-WP_003898511.1;Parent=gene-AL55_RS08725;Dbxref=GenBank:WP_003898511.1;Name=WP_003898511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215093.1;locus_tag=AL55_RS08725;product=Mut7-C RNAse domain-containing protein;protein_id=WP_003898511.1;transl_table=11 NZ_KK316828.1 RefSeq gene 675245 675736 . - . ID=gene-AL55_RS08730;Name=AL55_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08730;old_locus_tag=AL55_00601 NZ_KK316828.1 Protein Homology CDS 675245 675736 . - 0 ID=cds-WP_003403017.1;Parent=gene-AL55_RS08730;Dbxref=GenBank:WP_003403017.1;Name=WP_003403017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215094.1;locus_tag=AL55_RS08730;product=mycobacterial cell wall protein Rv0580c;protein_id=WP_003403017.1;transl_table=11 NZ_KK316828.1 RefSeq gene 675830 676045 . + . ID=gene-AL55_RS08735;Name=vapB26;gbkey=Gene;gene=vapB26;gene_biotype=protein_coding;locus_tag=AL55_RS08735;old_locus_tag=AL55_00602 NZ_KK316828.1 Protein Homology CDS 675830 676045 . + 0 ID=cds-WP_003403039.1;Parent=gene-AL55_RS08735;Dbxref=GenBank:WP_003403039.1;Name=WP_003403039.1;gbkey=CDS;gene=vapB26;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215095.1;locus_tag=AL55_RS08735;product=type II toxin-antitoxin system antitoxin VapB26;protein_id=WP_003403039.1;transl_table=11 NZ_KK316828.1 RefSeq gene 676042 676449 . + . ID=gene-AL55_RS08740;Name=vapC26;gbkey=Gene;gene=vapC26;gene_biotype=protein_coding;locus_tag=AL55_RS08740;old_locus_tag=AL55_00603 NZ_KK316828.1 Protein Homology CDS 676042 676449 . + 0 ID=cds-WP_003403047.1;Parent=gene-AL55_RS08740;Dbxref=GenBank:WP_003403047.1;Name=WP_003403047.1;gbkey=CDS;gene=vapC26;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215096.1;locus_tag=AL55_RS08740;product=type II toxin-antitoxin system toxin ribonuclease C26;protein_id=WP_003403047.1;transl_table=11 NZ_KK316828.1 RefSeq gene 676509 677195 . - . ID=gene-AL55_RS08745;Name=lpqN;gbkey=Gene;gene=lpqN;gene_biotype=protein_coding;locus_tag=AL55_RS08745;old_locus_tag=AL55_00604 NZ_KK316828.1 Protein Homology CDS 676509 677195 . - 0 ID=cds-WP_003403052.1;Parent=gene-AL55_RS08745;Dbxref=GenBank:WP_003403052.1;Name=WP_003403052.1;gbkey=CDS;gene=lpqN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215097.1;locus_tag=AL55_RS08745;product=envelope biogenesis lipoprotein LpqN;protein_id=WP_003403052.1;transl_table=11 NZ_KK316828.1 RefSeq gene 677349 679982 . + . ID=gene-AL55_RS08750;Name=AL55_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08750;old_locus_tag=AL55_00605 NZ_KK316828.1 Protein Homology CDS 677349 679982 . + 0 ID=cds-WP_031695359.1;Parent=gene-AL55_RS08750;Dbxref=GenBank:WP_031695359.1;Name=WP_031695359.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215098.1;locus_tag=AL55_RS08750;product=GH92 family glycosyl hydrolase;protein_id=WP_031695359.1;transl_table=11 NZ_KK316828.1 RefSeq gene 680005 682392 . - . ID=gene-AL55_RS08755;Name=AL55_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08755;old_locus_tag=AL55_00606 NZ_KK316828.1 Protein Homology CDS 680005 682392 . - 0 ID=cds-WP_003900178.1;Parent=gene-AL55_RS08755;Dbxref=GenBank:WP_003900178.1;Name=WP_003900178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215099.1;locus_tag=AL55_RS08755;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_003900178.1;transl_table=11 NZ_KK316828.1 RefSeq gene 682530 683252 . + . ID=gene-AL55_RS08760;Name=mce2R;gbkey=Gene;gene=mce2R;gene_biotype=protein_coding;locus_tag=AL55_RS08760;old_locus_tag=AL55_00607 NZ_KK316828.1 Protein Homology CDS 682530 683252 . + 0 ID=cds-WP_003403065.1;Parent=gene-AL55_RS08760;Dbxref=GenBank:WP_003403065.1;Name=WP_003403065.1;gbkey=CDS;gene=mce2R;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215100.1;locus_tag=AL55_RS08760;product=FadR family transcriptional regulator Mce2R;protein_id=WP_003403065.1;transl_table=11 NZ_KK316828.1 RefSeq gene 683249 684046 . + . ID=gene-AL55_RS08765;Name=AL55_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08765;old_locus_tag=AL55_00608 NZ_KK316828.1 Protein Homology CDS 683249 684046 . + 0 ID=cds-WP_003403095.1;Parent=gene-AL55_RS08765;Dbxref=GenBank:WP_003403095.1;Name=WP_003403095.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215101.1;locus_tag=AL55_RS08765;product=MlaE family ABC transporter permease;protein_id=WP_003403095.1;transl_table=11 NZ_KK316828.1 RefSeq gene 684048 684935 . + . ID=gene-AL55_RS08770;Name=AL55_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08770;old_locus_tag=AL55_00609 NZ_KK316828.1 Protein Homology CDS 684048 684935 . + 0 ID=cds-WP_003905347.1;Parent=gene-AL55_RS08770;Dbxref=GenBank:WP_003905347.1;Name=WP_003905347.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215102.1;locus_tag=AL55_RS08770;product=ABC transporter permease;protein_id=WP_003905347.1;transl_table=11 NZ_KK316828.1 RefSeq gene 684941 686155 . + . ID=gene-AL55_RS08775;Name=AL55_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08775;old_locus_tag=AL55_00610 NZ_KK316828.1 Protein Homology CDS 684941 686155 . + 0 ID=cds-WP_003403104.1;Parent=gene-AL55_RS08775;Dbxref=GenBank:WP_003403104.1;Name=WP_003403104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177740.1;locus_tag=AL55_RS08775;product=MCE family protein;protein_id=WP_003403104.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 686152 687184 . + . ID=gene-AL55_RS0104250;Name=AL55_RS0104250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0104250;old_locus_tag=AL55_00611;pseudo=true NZ_KK316828.1 Protein Homology CDS 686152 687184 . + 0 ID=cds-AL55_RS0104250;Parent=gene-AL55_RS0104250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873596.1;locus_tag=AL55_RS0104250;product=MCE family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 687181 688626 . + . ID=gene-AL55_RS08780;Name=AL55_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08780;old_locus_tag=AL55_00613 NZ_KK316828.1 Protein Homology CDS 687181 688626 . + 0 ID=cds-WP_003900181.1;Parent=gene-AL55_RS08780;Dbxref=GenBank:WP_003900181.1;Name=WP_003900181.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215105.1;locus_tag=AL55_RS08780;product=virulence factor Mce family protein;protein_id=WP_003900181.1;transl_table=11 NZ_KK316828.1 RefSeq gene 688623 690149 . + . ID=gene-AL55_RS08785;Name=AL55_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08785;old_locus_tag=AL55_00614 NZ_KK316828.1 Protein Homology CDS 688623 690149 . + 0 ID=cds-WP_003403112.1;Parent=gene-AL55_RS08785;Dbxref=GenBank:WP_003403112.1;Name=WP_003403112.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215106.1;locus_tag=AL55_RS08785;product=virulence factor Mce family protein;protein_id=WP_003403112.1;transl_table=11 NZ_KK316828.1 RefSeq gene 690212 691354 . + . ID=gene-AL55_RS08790;Name=lprL;gbkey=Gene;gene=lprL;gene_biotype=protein_coding;locus_tag=AL55_RS08790;old_locus_tag=AL55_00615 NZ_KK316828.1 Protein Homology CDS 690212 691354 . + 0 ID=cds-WP_003911253.1;Parent=gene-AL55_RS08790;Dbxref=GenBank:WP_003911253.1;Name=WP_003911253.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=lprL;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911253.1;locus_tag=AL55_RS08790;product=virulence factor Mce family protein;protein_id=WP_003911253.1;transl_table=11 NZ_KK316828.1 RefSeq gene 691359 692909 . + . ID=gene-AL55_RS08795;Name=AL55_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08795;old_locus_tag=AL55_00616 NZ_KK316828.1 Protein Homology CDS 691359 692909 . + 0 ID=cds-WP_003905349.1;Parent=gene-AL55_RS08795;Dbxref=GenBank:WP_003905349.1;Name=WP_003905349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215108.1;locus_tag=AL55_RS08795;product=MCE family protein;protein_id=WP_003905349.1;transl_table=11 NZ_KK316828.1 RefSeq gene 692961 693353 . - . ID=gene-AL55_RS08800;Name=vapC4;gbkey=Gene;gene=vapC4;gene_biotype=protein_coding;locus_tag=AL55_RS08800;old_locus_tag=AL55_00617 NZ_KK316828.1 Protein Homology CDS 692961 693353 . - 0 ID=cds-WP_003403122.1;Parent=gene-AL55_RS08800;Dbxref=GenBank:WP_003403122.1;Name=WP_003403122.1;gbkey=CDS;gene=vapC4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215109.1;locus_tag=AL55_RS08800;product=type II toxin-antitoxin system toxin ribonuclease C4;protein_id=WP_003403122.1;transl_table=11 NZ_KK316828.1 RefSeq gene 693350 693607 . - . ID=gene-AL55_RS08805;Name=vapB4;gbkey=Gene;gene=vapB4;gene_biotype=protein_coding;locus_tag=AL55_RS08805;old_locus_tag=AL55_00618 NZ_KK316828.1 Protein Homology CDS 693350 693607 . - 0 ID=cds-WP_003403125.1;Parent=gene-AL55_RS08805;Dbxref=GenBank:WP_003403125.1;Name=WP_003403125.1;gbkey=CDS;gene=vapB4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215110.1;locus_tag=AL55_RS08805;product=type II toxin-antitoxin system antitoxin VapB4;protein_id=WP_003403125.1;transl_table=11 NZ_KK316828.1 RefSeq gene 693790 695025 . - . ID=gene-AL55_RS08810;Name=AL55_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08810;old_locus_tag=AL55_00619 NZ_KK316828.1 Protein Homology CDS 693790 695025 . - 0 ID=cds-WP_003403128.1;Parent=gene-AL55_RS08810;Dbxref=GenBank:WP_003403128.1;Name=WP_003403128.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215111.1;locus_tag=AL55_RS08810;product=ATP-binding protein;protein_id=WP_003403128.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 695127 695315 . + . ID=gene-AL55_RS27965;Name=AL55_RS27965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27965;partial=true;pseudo=true;start_range=.,695127 NZ_KK316828.1 Protein Homology CDS 695127 695315 . + 0 ID=cds-AL55_RS27965;Parent=gene-AL55_RS27965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013827543.1;locus_tag=AL55_RS27965;partial=true;product=hypothetical protein;pseudo=true;start_range=.,695127;transl_table=11 NZ_KK316828.1 RefSeq gene 695276 695689 . - . ID=gene-AL55_RS08815;Name=AL55_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08815;old_locus_tag=AL55_00620 NZ_KK316828.1 Protein Homology CDS 695276 695689 . - 0 ID=cds-WP_003403137.1;Parent=gene-AL55_RS08815;Dbxref=GenBank:WP_003403137.1;Name=WP_003403137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215112.1;locus_tag=AL55_RS08815;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403137.1;transl_table=11 NZ_KK316828.1 RefSeq gene 695686 695922 . - . ID=gene-AL55_RS08820;Name=vapB27;gbkey=Gene;gene=vapB27;gene_biotype=protein_coding;locus_tag=AL55_RS08820;old_locus_tag=AL55_00621 NZ_KK316828.1 Protein Homology CDS 695686 695922 . - 0 ID=cds-WP_003403139.1;Parent=gene-AL55_RS08820;Dbxref=GenBank:WP_003403139.1;Name=WP_003403139.1;gbkey=CDS;gene=vapB27;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215113.1;locus_tag=AL55_RS08820;product=type II toxin-antitoxin system antitoxin VapB27;protein_id=WP_003403139.1;transl_table=11 NZ_KK316828.1 RefSeq gene 696026 696532 . - . ID=gene-AL55_RS08825;Name=AL55_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08825;old_locus_tag=AL55_00622 NZ_KK316828.1 Protein Homology CDS 696026 696532 . - 0 ID=cds-WP_003900973.1;Parent=gene-AL55_RS08825;Dbxref=GenBank:WP_003900973.1;Name=WP_003900973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900973.1;locus_tag=AL55_RS08825;product=two component system sensor kinase HK1;protein_id=WP_003900973.1;transl_table=11 NZ_KK316828.1 RefSeq gene 696646 697176 . - . ID=gene-AL55_RS08830;Name=AL55_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08830;old_locus_tag=AL55_00623 NZ_KK316828.1 Protein Homology CDS 696646 697176 . - 0 ID=cds-WP_003917320.1;Parent=gene-AL55_RS08830;Dbxref=GenBank:WP_003917320.1;Name=WP_003917320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917320.1;locus_tag=AL55_RS08830;product=two component system sensor kinase HK2;protein_id=WP_003917320.1;transl_table=11 NZ_KK316828.1 RefSeq gene 697160 697855 . - . ID=gene-AL55_RS08835;Name=tcrA;gbkey=Gene;gene=tcrA;gene_biotype=protein_coding;locus_tag=AL55_RS08835;old_locus_tag=AL55_00624 NZ_KK316828.1 Protein Homology CDS 697160 697855 . - 0 ID=cds-WP_003918099.1;Parent=gene-AL55_RS08835;Dbxref=GenBank:WP_003918099.1;Name=WP_003918099.1;gbkey=CDS;gene=tcrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585072.1;locus_tag=AL55_RS08835;product=two-component system response regulator TcrA;protein_id=WP_003918099.1;transl_table=11 NZ_KK316828.1 RefSeq gene 697978 698289 . + . ID=gene-AL55_RS08840;Name=AL55_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08840;old_locus_tag=AL55_00625 NZ_KK316828.1 Protein Homology CDS 697978 698289 . + 0 ID=cds-WP_003403164.1;Parent=gene-AL55_RS08840;Dbxref=GenBank:WP_003403164.1;Name=WP_003403164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215117.1;locus_tag=AL55_RS08840;product=PepSY domain-containing protein;protein_id=WP_003403164.1;transl_table=11 NZ_KK316828.1 RefSeq gene 698361 699311 . + . ID=gene-AL55_RS08845;Name=lpqO;gbkey=Gene;gene=lpqO;gene_biotype=protein_coding;locus_tag=AL55_RS08845;old_locus_tag=AL55_00626 NZ_KK316828.1 Protein Homology CDS 698361 699311 . + 0 ID=cds-WP_003900184.1;Parent=gene-AL55_RS08845;Dbxref=GenBank:WP_003900184.1;Name=WP_003900184.1;gbkey=CDS;gene=lpqO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215118.1;locus_tag=AL55_RS08845;product=DUF1259 domain-containing protein;protein_id=WP_003900184.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 699364 699458 . - . ID=gene-AL55_RS28155;Name=AL55_RS28155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28155;partial=true;pseudo=true;start_range=.,699364 NZ_KK316828.1 Protein Homology CDS 699364 699458 . - 0 ID=cds-AL55_RS28155;Parent=gene-AL55_RS28155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215127.1;locus_tag=AL55_RS28155;partial=true;product=hypothetical protein;pseudo=true;start_range=.,699364;transl_table=11 NZ_KK316828.1 RefSeq gene 699552 700136 . + . ID=gene-AL55_RS08850;Name=AL55_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08850;old_locus_tag=AL55_00627 NZ_KK316828.1 Protein Homology CDS 699552 700136 . + 0 ID=cds-WP_003403171.1;Parent=gene-AL55_RS08850;Dbxref=GenBank:WP_003403171.1;Name=WP_003403171.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215119.2;locus_tag=AL55_RS08850;product=IS607-like element IS1536 family transposase;protein_id=WP_003403171.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 700138 700848 . + . ID=gene-AL55_RS08855;Name=tnpB;end_range=700848,.;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AL55_RS08855;old_locus_tag=AL55_00628;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 700138 700848 . + 0 ID=cds-AL55_RS08855;Parent=gene-AL55_RS08855;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=700848,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217494.1;locus_tag=AL55_RS08855;partial=true;product=IS607 family element RNA-guided endonuclease TnpB;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 700851 701321 . + . ID=gene-AL55_RS08860;Name=AL55_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08860;old_locus_tag=AL55_00629 NZ_KK316828.1 Protein Homology CDS 700851 701321 . + 0 ID=cds-WP_003898523.1;Parent=gene-AL55_RS08860;Dbxref=GenBank:WP_003898523.1;Name=WP_003898523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898523.1;locus_tag=AL55_RS08860;product=hypothetical protein;protein_id=WP_003898523.1;transl_table=11 NZ_KK316828.1 RefSeq gene 701366 701611 . + . ID=gene-AL55_RS08865;Name=AL55_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08865;old_locus_tag=AL55_00630 NZ_KK316828.1 Protein Homology CDS 701366 701611 . + 0 ID=cds-WP_003403184.1;Parent=gene-AL55_RS08865;Dbxref=GenBank:WP_003403184.1;Name=WP_003403184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215122.1;locus_tag=AL55_RS08865;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003403184.1;transl_table=11 NZ_KK316828.1 RefSeq gene 701608 702009 . + . ID=gene-AL55_RS08870;Name=AL55_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08870;old_locus_tag=AL55_00631 NZ_KK316828.1 Protein Homology CDS 701608 702009 . + 0 ID=cds-WP_003403187.1;Parent=gene-AL55_RS08870;Dbxref=GenBank:WP_003403187.1;Name=WP_003403187.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215123.1;locus_tag=AL55_RS08870;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403187.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 702015 702179 . + . ID=gene-AL55_RS27540;Name=AL55_RS27540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27540;old_locus_tag=AL55_00632;partial=true;pseudo=true;start_range=.,702015 NZ_KK316828.1 Protein Homology CDS 702015 702179 . + 0 ID=cds-AL55_RS27540;Parent=gene-AL55_RS27540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292309.1;locus_tag=AL55_RS27540;partial=true;product=hypothetical protein;pseudo=true;start_range=.,702015;transl_table=11 NZ_KK316828.1 RefSeq gene 702397 702564 . - . ID=gene-AL55_RS27970;Name=AL55_RS27970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27970 NZ_KK316828.1 Protein Homology CDS 702397 702564 . - 0 ID=cds-WP_077385191.1;Parent=gene-AL55_RS27970;Dbxref=GenBank:WP_077385191.1;Name=WP_077385191.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.6;locus_tag=AL55_RS27970;product=DUF3800 domain-containing protein;protein_id=WP_077385191.1;transl_table=11 NZ_KK316828.1 RefSeq gene 702588 702881 . + . ID=gene-AL55_RS27975;Name=AL55_RS27975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27975 NZ_KK316828.1 Protein Homology CDS 702588 702881 . + 0 ID=cds-WP_016719609.1;Parent=gene-AL55_RS27975;Dbxref=GenBank:WP_016719609.1;Name=WP_016719609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719609.1;locus_tag=AL55_RS27975;product=hypothetical protein;protein_id=WP_016719609.1;transl_table=11 NZ_KK316828.1 RefSeq gene 702874 704031 . - . ID=gene-AL55_RS08880;Name=AL55_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08880;old_locus_tag=AL55_00633 NZ_KK316828.1 Protein Homology CDS 702874 704031 . - 0 ID=cds-WP_003898524.1;Parent=gene-AL55_RS08880;Dbxref=GenBank:WP_003898524.1;Name=WP_003898524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215124.1;locus_tag=AL55_RS08880;product=hypothetical protein;protein_id=WP_003898524.1;transl_table=11 NZ_KK316828.1 RefSeq gene 704083 704304 . - . ID=gene-AL55_RS0104265;Name=AL55_RS0104265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104265 NZ_KK316828.1 Protein Homology CDS 704083 704304 . - 0 ID=cds-WP_003898525.1;Parent=gene-AL55_RS0104265;Dbxref=GenBank:WP_003898525.1;Name=WP_003898525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215125.2;locus_tag=AL55_RS0104265;product=DUF4926 domain-containing protein;protein_id=WP_003898525.1;transl_table=11 NZ_KK316828.1 RefSeq gene 704446 705051 . + . ID=gene-AL55_RS08885;Name=AL55_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08885;old_locus_tag=AL55_00635 NZ_KK316828.1 Protein Homology CDS 704446 705051 . + 0 ID=cds-WP_003898526.1;Parent=gene-AL55_RS08885;Dbxref=GenBank:WP_003898526.1;Name=WP_003898526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215126.1;locus_tag=AL55_RS08885;product=hypothetical protein;protein_id=WP_003898526.1;transl_table=11 NZ_KK316828.1 RefSeq gene 705070 707637 . - . ID=gene-AL55_RS08890;Name=AL55_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08890;old_locus_tag=AL55_00636 NZ_KK316828.1 Protein Homology CDS 705070 707637 . - 0 ID=cds-WP_003901879.1;Parent=gene-AL55_RS08890;Dbxref=GenBank:WP_003901879.1;Name=WP_003901879.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215127.1;locus_tag=AL55_RS08890;product=SEC-C metal-binding domain-containing protein;protein_id=WP_003901879.1;transl_table=11 NZ_KK316828.1 RefSeq gene 707721 708470 . + . ID=gene-AL55_RS0104270;Name=AL55_RS0104270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104270;old_locus_tag=AL55_00637 NZ_KK316828.1 Protein Homology CDS 707721 708470 . + 0 ID=cds-WP_003898528.1;Parent=gene-AL55_RS0104270;Dbxref=GenBank:WP_003898528.1;Name=WP_003898528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215128.2;locus_tag=AL55_RS0104270;product=hypothetical protein;protein_id=WP_003898528.1;transl_table=11 NZ_KK316828.1 RefSeq gene 708467 708709 . + . ID=gene-AL55_RS08895;Name=AL55_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08895;old_locus_tag=AL55_00638 NZ_KK316828.1 Protein Homology CDS 708467 708709 . + 0 ID=cds-WP_003403210.1;Parent=gene-AL55_RS08895;Dbxref=GenBank:WP_003403210.1;Name=WP_003403210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215129.1;locus_tag=AL55_RS08895;product=hypothetical protein;protein_id=WP_003403210.1;transl_table=11 NZ_KK316828.1 RefSeq gene 708706 708972 . - . ID=gene-AL55_RS27980;Name=AL55_RS27980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27980;old_locus_tag=AL55_00639 NZ_KK316828.1 Protein Homology CDS 708706 708972 . - 0 ID=cds-WP_003898530.1;Parent=gene-AL55_RS27980;Dbxref=GenBank:WP_003898530.1;Name=WP_003898530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898530.1;locus_tag=AL55_RS27980;product=hypothetical protein;protein_id=WP_003898530.1;transl_table=11 NZ_KK316828.1 RefSeq gene 708904 709131 . + . ID=gene-AL55_RS08905;Name=AL55_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08905;old_locus_tag=AL55_00640 NZ_KK316828.1 Protein Homology CDS 708904 709131 . + 0 ID=cds-WP_003403213.1;Parent=gene-AL55_RS08905;Dbxref=GenBank:WP_003403213.1;Name=WP_003403213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409270.1;locus_tag=AL55_RS08905;product=antitoxin VapB29;protein_id=WP_003403213.1;transl_table=11 NZ_KK316828.1 RefSeq gene 709128 709529 . + . ID=gene-AL55_RS08910;Name=vapC29;gbkey=Gene;gene=vapC29;gene_biotype=protein_coding;locus_tag=AL55_RS08910;old_locus_tag=AL55_00641 NZ_KK316828.1 Protein Homology CDS 709128 709529 . + 0 ID=cds-WP_003403218.1;Parent=gene-AL55_RS08910;Dbxref=GenBank:WP_003403218.1;Name=WP_003403218.1;gbkey=CDS;gene=vapC29;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215131.1;locus_tag=AL55_RS08910;product=type II toxin-antitoxin system ribonuclease VapC29;protein_id=WP_003403218.1;transl_table=11 NZ_KK316828.1 RefSeq gene 709760 710353 . + . ID=gene-AL55_RS28160;Name=AL55_RS28160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28160;old_locus_tag=AL55_00642 NZ_KK316828.1 Protein Homology CDS 709760 710353 . + 0 ID=cds-WP_015629632.1;Parent=gene-AL55_RS28160;Dbxref=GenBank:WP_015629632.1;Name=WP_015629632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015629632.1;locus_tag=AL55_RS28160;product=HIT family protein;protein_id=WP_015629632.1;transl_table=11 NZ_KK316828.1 RefSeq gene 710371 710841 . + . ID=gene-AL55_RS28165;Name=AL55_RS28165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28165;old_locus_tag=AL55_00643 NZ_KK316828.1 Protein Homology CDS 710371 710841 . + 0 ID=cds-WP_003900190.1;Parent=gene-AL55_RS28165;Dbxref=GenBank:WP_003900190.1;Name=WP_003900190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012054156.1;locus_tag=AL55_RS28165;product=HIT family protein;protein_id=WP_003900190.1;transl_table=11 NZ_KK316828.1 RefSeq gene 710838 711929 . + . ID=gene-AL55_RS08915;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=AL55_RS08915;old_locus_tag=AL55_00644 NZ_KK316828.1 Protein Homology CDS 710838 711929 . + 0 ID=cds-WP_003900977.1;Parent=gene-AL55_RS08915;Dbxref=GenBank:WP_003900977.1;Name=WP_003900977.1;gbkey=CDS;gene=galK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215134.1;locus_tag=AL55_RS08915;product=galactokinase;protein_id=WP_003900977.1;transl_table=11 NZ_KK316828.1 RefSeq gene 712324 713388 . + . ID=gene-AL55_RS08920;Name=AL55_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08920;old_locus_tag=AL55_00645 NZ_KK316828.1 Protein Homology CDS 712324 713388 . + 0 ID=cds-WP_003898532.1;Parent=gene-AL55_RS08920;Dbxref=GenBank:WP_003898532.1;Name=WP_003898532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215135.1;locus_tag=AL55_RS08920;product=zinc ribbon domain-containing protein;protein_id=WP_003898532.1;transl_table=11 NZ_KK316828.1 RefSeq gene 713492 714439 . + . ID=gene-AL55_RS08925;Name=AL55_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08925;old_locus_tag=AL55_00646 NZ_KK316828.1 Protein Homology CDS 713492 714439 . + 0 ID=cds-WP_003403232.1;Parent=gene-AL55_RS08925;Dbxref=GenBank:WP_003403232.1;Name=WP_003403232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215136.2;locus_tag=AL55_RS08925;product=DUF732 domain-containing protein;protein_id=WP_003403232.1;transl_table=11 NZ_KK316828.1 RefSeq gene 714532 714786 . + . ID=gene-AL55_RS08930;Name=vapB30;gbkey=Gene;gene=vapB30;gene_biotype=protein_coding;locus_tag=AL55_RS08930;old_locus_tag=AL55_00647 NZ_KK316828.1 Protein Homology CDS 714532 714786 . + 0 ID=cds-WP_003403235.1;Parent=gene-AL55_RS08930;Dbxref=GenBank:WP_003403235.1;Name=WP_003403235.1;gbkey=CDS;gene=vapB30;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215137.1;locus_tag=AL55_RS08930;product=type II toxin-antitoxin system antitoxin VapB30;protein_id=WP_003403235.1;transl_table=11 NZ_KK316828.1 RefSeq gene 714786 715181 . + . ID=gene-AL55_RS08935;Name=vapC30;gbkey=Gene;gene=vapC30;gene_biotype=protein_coding;locus_tag=AL55_RS08935;old_locus_tag=AL55_00648 NZ_KK316828.1 Protein Homology CDS 714786 715181 . + 0 ID=cds-WP_003403236.1;Parent=gene-AL55_RS08935;Dbxref=GenBank:WP_003403236.1;Name=WP_003403236.1;gbkey=CDS;gene=vapC30;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215138.1;locus_tag=AL55_RS08935;product=type II toxin-antitoxin system toxin ribonuclease C30;protein_id=WP_003403236.1;transl_table=11 NZ_KK316828.1 RefSeq gene 715275 716015 . - . ID=gene-AL55_RS08940;Name=AL55_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08940;old_locus_tag=AL55_00649 NZ_KK316828.1 Protein Homology CDS 715275 716015 . - 0 ID=cds-WP_003403239.1;Parent=gene-AL55_RS08940;Dbxref=GenBank:WP_003403239.1;Name=WP_003403239.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215139.1;locus_tag=AL55_RS08940;product=TVP38/TMEM64 family protein;protein_id=WP_003403239.1;transl_table=11 NZ_KK316828.1 RefSeq gene 716147 716407 . + . ID=gene-AL55_RS08945;Name=AL55_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08945;old_locus_tag=AL55_00650 NZ_KK316828.1 Protein Homology CDS 716147 716407 . + 0 ID=cds-WP_003403244.1;Parent=gene-AL55_RS08945;Dbxref=GenBank:WP_003403244.1;Name=WP_003403244.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215140.1;locus_tag=AL55_RS08945;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003403244.1;transl_table=11 NZ_KK316828.1 RefSeq gene 716404 716811 . + . ID=gene-AL55_RS08950;Name=AL55_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08950;old_locus_tag=AL55_00651 NZ_KK316828.1 Protein Homology CDS 716404 716811 . + 0 ID=cds-WP_003403246.1;Parent=gene-AL55_RS08950;Dbxref=GenBank:WP_003403246.1;Name=WP_003403246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215141.1;locus_tag=AL55_RS08950;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403246.1;transl_table=11 NZ_KK316828.1 RefSeq gene 716883 718034 . - . ID=gene-AL55_RS08955;Name=AL55_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08955;old_locus_tag=AL55_00652 NZ_KK316828.1 Protein Homology CDS 716883 718034 . - 0 ID=cds-WP_003403248.1;Parent=gene-AL55_RS08955;Dbxref=GenBank:WP_003403248.1;Name=WP_003403248.1;Ontology_term=GO:0007165;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215142.1;locus_tag=AL55_RS08955;product=FIST signal transduction protein;protein_id=WP_003403248.1;transl_table=11 NZ_KK316828.1 RefSeq gene 718127 719854 . - . ID=gene-AL55_RS08960;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AL55_RS08960;old_locus_tag=AL55_00653 NZ_KK316828.1 Protein Homology CDS 718127 719854 . - 0 ID=cds-WP_003901883.1;Parent=gene-AL55_RS08960;Dbxref=GenBank:WP_003901883.1;Name=WP_003901883.1;Ontology_term=GO:0006281,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215143.1;locus_tag=AL55_RS08960;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_003901883.1;transl_table=11 NZ_KK316828.1 RefSeq gene 719851 723135 . - . ID=gene-AL55_RS08965;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AL55_RS08965;old_locus_tag=AL55_00654 NZ_KK316828.1 Protein Homology CDS 719851 723135 . - 0 ID=cds-WP_003905355.1;Parent=gene-AL55_RS08965;Dbxref=GenBank:WP_003905355.1;Name=WP_003905355.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215144.1;locus_tag=AL55_RS08965;product=exodeoxyribonuclease V subunit beta;protein_id=WP_003905355.1;transl_table=11 NZ_KK316828.1 RefSeq gene 723135 726428 . - . ID=gene-AL55_RS08970;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AL55_RS08970;old_locus_tag=AL55_00655 NZ_KK316828.1 Protein Homology CDS 723135 726428 . - 0 ID=cds-WP_003900193.1;Parent=gene-AL55_RS08970;Dbxref=GenBank:WP_003900193.1;Name=WP_003900193.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215145.1;locus_tag=AL55_RS08970;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_003900193.1;transl_table=11 NZ_KK316828.1 RefSeq gene 726705 727400 . - . ID=gene-AL55_RS08975;Name=AL55_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08975;old_locus_tag=AL55_00656 NZ_KK316828.1 Protein Homology CDS 726705 727400 . - 0 ID=cds-WP_003403259.1;Parent=gene-AL55_RS08975;Dbxref=GenBank:WP_003403259.1;Name=WP_003403259.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215146.1;locus_tag=AL55_RS08975;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003403259.1;transl_table=11 NZ_KK316828.1 RefSeq gene 727449 728288 . - . ID=gene-AL55_RS08980;Name=AL55_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08980;old_locus_tag=AL55_00657 NZ_KK316828.1 Protein Homology CDS 727449 728288 . - 0 ID=cds-WP_003403262.1;Parent=gene-AL55_RS08980;Dbxref=GenBank:WP_003403262.1;Name=WP_003403262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215147.1;locus_tag=AL55_RS08980;product=hypothetical protein;protein_id=WP_003403262.1;transl_table=11 NZ_KK316828.1 RefSeq gene 728442 729155 . - . ID=gene-AL55_RS08985;Name=AL55_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08985;old_locus_tag=AL55_00658 NZ_KK316828.1 Protein Homology CDS 728442 729155 . - 0 ID=cds-WP_003403266.1;Parent=gene-AL55_RS08985;Dbxref=GenBank:WP_003403266.1;Name=WP_003403266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215148.1;locus_tag=AL55_RS08985;product=MBL fold metallo-hydrolase;protein_id=WP_003403266.1;transl_table=11 NZ_KK316828.1 RefSeq gene 729274 729486 . + . ID=gene-AL55_RS08990;Name=AL55_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS08990;old_locus_tag=AL55_00659 NZ_KK316828.1 Protein Homology CDS 729274 729486 . + 0 ID=cds-WP_003898537.1;Parent=gene-AL55_RS08990;Dbxref=GenBank:WP_003898537.1;Name=WP_003898537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287878.1;locus_tag=AL55_RS08990;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003898537.1;transl_table=11 NZ_KK316828.1 RefSeq gene 729616 729688 . + . ID=gene-AL55_RS08995;Name=AL55_RS08995;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS08995;old_locus_tag=AL55_00660 NZ_KK316828.1 tRNAscan-SE tRNA 729616 729688 . + . ID=rna-AL55_RS08995;Parent=gene-AL55_RS08995;anticodon=(pos:729649..729651);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS08995;product=tRNA-Thr NZ_KK316828.1 tRNAscan-SE exon 729616 729688 . + . ID=exon-AL55_RS08995-1;Parent=rna-AL55_RS08995;anticodon=(pos:729649..729651);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS08995;product=tRNA-Thr NZ_KK316828.1 RefSeq gene 729725 729798 . + . ID=gene-AL55_RS09000;Name=AL55_RS09000;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS09000;old_locus_tag=AL55_00661 NZ_KK316828.1 tRNAscan-SE tRNA 729725 729798 . + . ID=rna-AL55_RS09000;Parent=gene-AL55_RS09000;anticodon=(pos:729759..729761);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS09000;product=tRNA-Met NZ_KK316828.1 tRNAscan-SE exon 729725 729798 . + . ID=exon-AL55_RS09000-1;Parent=rna-AL55_RS09000;anticodon=(pos:729759..729761);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS09000;product=tRNA-Met NZ_KK316828.1 RefSeq gene 729834 730001 . + . ID=gene-AL55_RS09005;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AL55_RS09005;old_locus_tag=AL55_00662 NZ_KK316828.1 Protein Homology CDS 729834 730001 . + 0 ID=cds-WP_003898538.1;Parent=gene-AL55_RS09005;Dbxref=GenBank:WP_003898538.1;Name=WP_003898538.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177630.1;locus_tag=AL55_RS09005;product=50S ribosomal protein L33;protein_id=WP_003898538.1;transl_table=11 NZ_KK316828.1 RefSeq gene 730052 730528 . + . ID=gene-AL55_RS09010;Name=hadA;gbkey=Gene;gene=hadA;gene_biotype=protein_coding;locus_tag=AL55_RS09010;old_locus_tag=AL55_00663 NZ_KK316828.1 Protein Homology CDS 730052 730528 . + 0 ID=cds-WP_003403277.1;Parent=gene-AL55_RS09010;Dbxref=GenBank:WP_003403277.1;Name=WP_003403277.1;gbkey=CDS;gene=hadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215149.1;locus_tag=AL55_RS09010;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadA;protein_id=WP_003403277.1;transl_table=11 NZ_KK316828.1 RefSeq gene 730515 730943 . + . ID=gene-AL55_RS09015;Name=hadB;gbkey=Gene;gene=hadB;gene_biotype=protein_coding;locus_tag=AL55_RS09015;old_locus_tag=AL55_00664 NZ_KK316828.1 Protein Homology CDS 730515 730943 . + 0 ID=cds-WP_003903106.1;Parent=gene-AL55_RS09015;Dbxref=GenBank:WP_003903106.1;Name=WP_003903106.1;Ontology_term=GO:0071768;gbkey=CDS;gene=hadB;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215150.1;locus_tag=AL55_RS09015;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadB;protein_id=WP_003903106.1;transl_table=11 NZ_KK316828.1 RefSeq gene 730947 731447 . + . ID=gene-AL55_RS09020;Name=hadC;gbkey=Gene;gene=hadC;gene_biotype=protein_coding;locus_tag=AL55_RS09020;old_locus_tag=AL55_00665 NZ_KK316828.1 Protein Homology CDS 730947 731447 . + 0 ID=cds-WP_003403282.1;Parent=gene-AL55_RS09020;Dbxref=GenBank:WP_003403282.1;Name=WP_003403282.1;gbkey=CDS;gene=hadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215151.1;locus_tag=AL55_RS09020;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadC;protein_id=WP_003403282.1;transl_table=11 NZ_KK316828.1 RefSeq gene 731646 731718 . + . ID=gene-AL55_RS09025;Name=AL55_RS09025;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS09025;old_locus_tag=AL55_00666 NZ_KK316828.1 tRNAscan-SE tRNA 731646 731718 . + . ID=rna-AL55_RS09025;Parent=gene-AL55_RS09025;anticodon=(pos:731679..731681);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS09025;product=tRNA-Trp NZ_KK316828.1 tRNAscan-SE exon 731646 731718 . + . ID=exon-AL55_RS09025-1;Parent=rna-AL55_RS09025;anticodon=(pos:731679..731681);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS09025;product=tRNA-Trp NZ_KK316828.1 RefSeq gene 731859 732344 . + . ID=gene-AL55_RS09030;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AL55_RS09030;old_locus_tag=AL55_00667 NZ_KK316828.1 Protein Homology CDS 731859 732344 . + 0 ID=cds-WP_003403284.1;Parent=gene-AL55_RS09030;Dbxref=GenBank:WP_003403284.1;Name=WP_003403284.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177743.1;locus_tag=AL55_RS09030;product=preprotein translocase subunit SecE;protein_id=WP_003403284.1;transl_table=11 NZ_KK316828.1 RefSeq gene 732376 733092 . + . ID=gene-AL55_RS09035;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AL55_RS09035;old_locus_tag=AL55_00668 NZ_KK316828.1 Protein Homology CDS 732376 733092 . + 0 ID=cds-WP_003403288.1;Parent=gene-AL55_RS09035;Dbxref=GenBank:WP_003403288.1;Name=WP_003403288.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215153.1;locus_tag=AL55_RS09035;product=transcription termination/antitermination protein NusG;protein_id=WP_003403288.1;transl_table=11 NZ_KK316828.1 RefSeq gene 733144 733572 . + . ID=gene-AL55_RS09040;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AL55_RS09040;old_locus_tag=AL55_00669 NZ_KK316828.1 Protein Homology CDS 733144 733572 . + 0 ID=cds-WP_003403291.1;Parent=gene-AL55_RS09040;Dbxref=GenBank:WP_003403291.1;Name=WP_003403291.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215154.1;locus_tag=AL55_RS09040;product=50S ribosomal protein L11;protein_id=WP_003403291.1;transl_table=11 NZ_KK316828.1 RefSeq gene 733639 734346 . + . ID=gene-AL55_RS09045;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AL55_RS09045;old_locus_tag=AL55_00670 NZ_KK316828.1 Protein Homology CDS 733639 734346 . + 0 ID=cds-WP_003403292.1;Parent=gene-AL55_RS09045;Dbxref=GenBank:WP_003403292.1;Name=WP_003403292.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215155.1;locus_tag=AL55_RS09045;product=50S ribosomal protein L1;protein_id=WP_003403292.1;transl_table=11 NZ_KK316828.1 RefSeq gene 734420 735325 . - . ID=gene-AL55_RS09050;Name=mmaA4;gbkey=Gene;gene=mmaA4;gene_biotype=protein_coding;locus_tag=AL55_RS09050;old_locus_tag=AL55_00671 NZ_KK316828.1 Protein Homology CDS 734420 735325 . - 0 ID=cds-WP_003900195.1;Parent=gene-AL55_RS09050;Dbxref=GenBank:WP_003900195.1;Name=WP_003900195.1;gbkey=CDS;gene=mmaA4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215156.1;locus_tag=AL55_RS09050;product=hydroxymycolate synthase MmaA4;protein_id=WP_003900195.1;transl_table=11 NZ_KK316828.1 RefSeq gene 735390 736271 . - . ID=gene-AL55_RS09055;Name=mmaA3;gbkey=Gene;gene=mmaA3;gene_biotype=protein_coding;locus_tag=AL55_RS09055;old_locus_tag=AL55_00672 NZ_KK316828.1 Protein Homology CDS 735390 736271 . - 0 ID=cds-WP_003403302.1;Parent=gene-AL55_RS09055;Dbxref=GenBank:WP_003403302.1;Name=WP_003403302.1;gbkey=CDS;gene=mmaA3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215157.1;locus_tag=AL55_RS09055;product=methoxy mycolic acid synthase MmaA3;protein_id=WP_003403302.1;transl_table=11 NZ_KK316828.1 RefSeq gene 736419 737282 . - . ID=gene-AL55_RS09060;Name=mmaA2;gbkey=Gene;gene=mmaA2;gene_biotype=protein_coding;locus_tag=AL55_RS09060;old_locus_tag=AL55_00673 NZ_KK316828.1 Protein Homology CDS 736419 737282 . - 0 ID=cds-WP_003905358.1;Parent=gene-AL55_RS09060;Dbxref=GenBank:WP_003905358.1;Name=WP_003905358.1;gbkey=CDS;gene=mmaA2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215158.1;locus_tag=AL55_RS09060;product=cyclopropane mycolic acid synthase MmaA2;protein_id=WP_003905358.1;transl_table=11 NZ_KK316828.1 RefSeq gene 737449 738309 . - . ID=gene-AL55_RS09065;Name=mmaA1;gbkey=Gene;gene=mmaA1;gene_biotype=protein_coding;locus_tag=AL55_RS09065;old_locus_tag=AL55_00674 NZ_KK316828.1 Protein Homology CDS 737449 738309 . - 0 ID=cds-WP_003403310.1;Parent=gene-AL55_RS09065;Dbxref=GenBank:WP_003403310.1;Name=WP_003403310.1;gbkey=CDS;gene=mmaA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215159.1;locus_tag=AL55_RS09065;product=mycolic acid methyltransferase MmaA1;protein_id=WP_003403310.1;transl_table=11 NZ_KK316828.1 RefSeq gene 738356 739261 . - . ID=gene-AL55_RS09070;Name=lipG;gbkey=Gene;gene=lipG;gene_biotype=protein_coding;locus_tag=AL55_RS09070;old_locus_tag=AL55_00675 NZ_KK316828.1 Protein Homology CDS 738356 739261 . - 0 ID=cds-WP_003403314.1;Parent=gene-AL55_RS09070;Dbxref=GenBank:WP_003403314.1;Name=WP_003403314.1;gbkey=CDS;gene=lipG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215160.1;locus_tag=AL55_RS09070;product=lipase/esterase LipG;protein_id=WP_003403314.1;transl_table=11 NZ_KK316828.1 RefSeq gene 739273 740619 . - . ID=gene-AL55_RS09075;Name=AL55_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09075;old_locus_tag=AL55_00676 NZ_KK316828.1 Protein Homology CDS 739273 740619 . - 0 ID=cds-WP_003904450.1;Parent=gene-AL55_RS09075;Dbxref=GenBank:WP_003904450.1;Name=WP_003904450.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292344.1;locus_tag=AL55_RS09075;product=ABC1 kinase family protein;protein_id=WP_003904450.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 740845 745045 . + . ID=gene-AL55_RS0104295;Name=AL55_RS0104295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0104295;old_locus_tag=AL55_00677;pseudo=true NZ_KK316828.1 Protein Homology CDS 740845 745045 . + 0 ID=cds-AL55_RS0104295;Parent=gene-AL55_RS0104295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013988757.1;locus_tag=AL55_RS0104295;product=NEW3 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 745042 745716 . + . ID=gene-AL55_RS09080;Name=AL55_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09080;old_locus_tag=AL55_00678 NZ_KK316828.1 Protein Homology CDS 745042 745716 . + 0 ID=cds-WP_003403326.1;Parent=gene-AL55_RS09080;Dbxref=GenBank:WP_003403326.1;Name=WP_003403326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177744.1;locus_tag=AL55_RS09080;product=DUF7158 domain-containing protein;protein_id=WP_003403326.1;transl_table=11 NZ_KK316828.1 RefSeq gene 745716 746624 . + . ID=gene-AL55_RS09085;Name=AL55_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09085;old_locus_tag=AL55_00679 NZ_KK316828.1 Protein Homology CDS 745716 746624 . + 0 ID=cds-WP_003403330.1;Parent=gene-AL55_RS09085;Dbxref=GenBank:WP_003403330.1;Name=WP_003403330.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215164.1;locus_tag=AL55_RS09085;product=ROK family protein;protein_id=WP_003403330.1;transl_table=11 NZ_KK316828.1 RefSeq gene 746955 747491 . + . ID=gene-AL55_RS09090;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AL55_RS09090;old_locus_tag=AL55_00680 NZ_KK316828.1 Protein Homology CDS 746955 747491 . + 0 ID=cds-WP_003403341.1;Parent=gene-AL55_RS09090;Dbxref=GenBank:WP_003403341.1;Name=WP_003403341.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215165.1;locus_tag=AL55_RS09090;product=50S ribosomal protein L10;protein_id=WP_003403341.1;transl_table=11 NZ_KK316828.1 RefSeq gene 747528 747920 . + . ID=gene-AL55_RS09095;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AL55_RS09095;old_locus_tag=AL55_00681 NZ_KK316828.1 Protein Homology CDS 747528 747920 . + 0 ID=cds-WP_003403353.1;Parent=gene-AL55_RS09095;Dbxref=GenBank:WP_003403353.1;Name=WP_003403353.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215166.1;locus_tag=AL55_RS09095;product=50S ribosomal protein L7/L12;protein_id=WP_003403353.1;transl_table=11 NZ_KK316828.1 RefSeq gene 747913 748608 . - . ID=gene-AL55_RS09100;Name=AL55_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09100;old_locus_tag=AL55_00682 NZ_KK316828.1 Protein Homology CDS 747913 748608 . - 0 ID=cds-WP_003403355.1;Parent=gene-AL55_RS09100;Dbxref=GenBank:WP_003403355.1;Name=WP_003403355.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215167.1;locus_tag=AL55_RS09100;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403355.1;transl_table=11 NZ_KK316828.1 RefSeq gene 748679 750184 . + . ID=gene-AL55_RS09105;Name=AL55_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09105;old_locus_tag=AL55_00683 NZ_KK316828.1 Protein Homology CDS 748679 750184 . + 0 ID=cds-WP_003403360.1;Parent=gene-AL55_RS09105;Dbxref=GenBank:WP_003403360.1;Name=WP_003403360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215168.1;locus_tag=AL55_RS09105;product=carotenoid cleavage oxygenase;protein_id=WP_003403360.1;transl_table=11 NZ_KK316828.1 RefSeq gene 750265 751275 . + . ID=gene-AL55_RS09110;Name=mkl;gbkey=Gene;gene=mkl;gene_biotype=protein_coding;locus_tag=AL55_RS09110;old_locus_tag=AL55_00684 NZ_KK316828.1 Protein Homology CDS 750265 751275 . + 0 ID=cds-WP_003911248.1;Parent=gene-AL55_RS09110;Dbxref=GenBank:WP_003911248.1;Name=WP_003911248.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=mkl;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911248.1;locus_tag=AL55_RS09110;product=ABC transporter ATP-binding protein;protein_id=WP_003911248.1;transl_table=11 NZ_KK316828.1 RefSeq gene 751663 752046 . - . ID=gene-AL55_RS09115;Name=AL55_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09115;old_locus_tag=AL55_00685 NZ_KK316828.1 Protein Homology CDS 751663 752046 . - 0 ID=cds-WP_003403365.1;Parent=gene-AL55_RS09115;Dbxref=GenBank:WP_003403365.1;Name=WP_003403365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215170.1;locus_tag=AL55_RS09115;product=ribonuclease VapC6;protein_id=WP_003403365.1;transl_table=11 NZ_KK316828.1 RefSeq gene 752141 752296 . - . ID=gene-AL55_RS09120;Name=AL55_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09120;old_locus_tag=AL55_00686 NZ_KK316828.1 Protein Homology CDS 752141 752296 . - 0 ID=cds-WP_003403368.1;Parent=gene-AL55_RS09120;Dbxref=GenBank:WP_003403368.1;Name=WP_003403368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215171.1;locus_tag=AL55_RS09120;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003403368.1;transl_table=11 NZ_KK316828.1 RefSeq gene 752372 753088 . - . ID=gene-AL55_RS09125;Name=AL55_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09125;old_locus_tag=AL55_00687 NZ_KK316828.1 Protein Homology CDS 752372 753088 . - 0 ID=cds-WP_003403371.1;Parent=gene-AL55_RS09125;Dbxref=GenBank:WP_003403371.1;Name=WP_003403371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215172.1;locus_tag=AL55_RS09125;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_003403371.1;transl_table=11 NZ_KK316828.1 RefSeq gene 753364 753672 . - . ID=gene-AL55_RS09130;Name=AL55_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09130;old_locus_tag=AL55_00688 NZ_KK316828.1 Protein Homology CDS 753364 753672 . - 0 ID=cds-WP_003403376.1;Parent=gene-AL55_RS09130;Dbxref=GenBank:WP_003403376.1;Name=WP_003403376.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215173.1;locus_tag=AL55_RS09130;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_003403376.1;transl_table=11 NZ_KK316828.1 RefSeq gene 753659 753904 . - . ID=gene-AL55_RS09135;Name=AL55_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09135;old_locus_tag=AL55_00689 NZ_KK316828.1 Protein Homology CDS 753659 753904 . - 0 ID=cds-WP_003403381.1;Parent=gene-AL55_RS09135;Dbxref=GenBank:WP_003403381.1;Name=WP_003403381.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215174.1;locus_tag=AL55_RS09135;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003403381.1;transl_table=11 NZ_KK316828.1 RefSeq gene 754014 754451 . - . ID=gene-AL55_RS09140;Name=AL55_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09140;old_locus_tag=AL55_00690 NZ_KK316828.1 Protein Homology CDS 754014 754451 . - 0 ID=cds-WP_003403386.1;Parent=gene-AL55_RS09140;Dbxref=GenBank:WP_003403386.1;Name=WP_003403386.1;Ontology_term=GO:0004540,GO:0046872,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215175.1;locus_tag=AL55_RS09140;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403386.1;transl_table=11 NZ_KK316828.1 RefSeq gene 754448 754702 . - . ID=gene-AL55_RS0104300;Name=AL55_RS0104300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104300;old_locus_tag=AL55_00691 NZ_KK316828.1 Protein Homology CDS 754448 754702 . - 0 ID=cds-WP_003911263.1;Parent=gene-AL55_RS0104300;Dbxref=GenBank:WP_003911263.1;Name=WP_003911263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215176.2;locus_tag=AL55_RS0104300;product=antitoxin VapB7;protein_id=WP_003911263.1;transl_table=11 NZ_KK316828.1 RefSeq gene 754816 757179 . + . ID=gene-AL55_RS09145;Name=atsD;gbkey=Gene;gene=atsD;gene_biotype=protein_coding;locus_tag=AL55_RS09145;old_locus_tag=AL55_00692 NZ_KK316828.1 Protein Homology CDS 754816 757179 . + 0 ID=cds-WP_003901895.1;Parent=gene-AL55_RS09145;Dbxref=GenBank:WP_003901895.1;Name=WP_003901895.1;gbkey=CDS;gene=atsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215177.1;locus_tag=AL55_RS09145;product=arylsulfatase AtsD;protein_id=WP_003901895.1;transl_table=11 NZ_KK316828.1 RefSeq gene 757242 757568 . + . ID=gene-AL55_RS09150;Name=AL55_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09150;old_locus_tag=AL55_00693 NZ_KK316828.1 Protein Homology CDS 757242 757568 . + 0 ID=cds-WP_003403401.1;Parent=gene-AL55_RS09150;Dbxref=GenBank:WP_003403401.1;Name=WP_003403401.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: protein motif:HMM:TIGR01552.1;locus_tag=AL55_RS09150;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003403401.1;transl_table=11 NZ_KK316828.1 RefSeq gene 757480 757818 . + . ID=gene-AL55_RS09155;Name=AL55_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09155;old_locus_tag=AL55_00694 NZ_KK316828.1 Protein Homology CDS 757480 757818 . + 0 ID=cds-WP_003403405.1;Parent=gene-AL55_RS09155;Dbxref=GenBank:WP_003403405.1;Name=WP_003403405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215179.1;locus_tag=AL55_RS09155;product=PIN domain-containing protein;protein_id=WP_003403405.1;transl_table=11 NZ_KK316828.1 RefSeq gene 757815 757988 . + . ID=gene-AL55_RS09160;Name=AL55_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09160;old_locus_tag=AL55_00695 NZ_KK316828.1 Protein Homology CDS 757815 757988 . + 0 ID=cds-WP_003898549.1;Parent=gene-AL55_RS09160;Dbxref=GenBank:WP_003898549.1;Name=WP_003898549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215180.1;locus_tag=AL55_RS09160;product=hypothetical protein;protein_id=WP_003898549.1;transl_table=11 NZ_KK316828.1 RefSeq gene 758486 762004 . + . ID=gene-AL55_RS09165;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AL55_RS09165;old_locus_tag=AL55_00696 NZ_KK316828.1 Protein Homology CDS 758486 762004 . + 0 ID=cds-WP_003900992.1;Parent=gene-AL55_RS09165;Dbxref=GenBank:WP_003900992.1;Name=WP_003900992.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0032549;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,ribonucleoside binding|0032549||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215181.1;locus_tag=AL55_RS09165;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_003900992.1;transl_table=11 NZ_KK316828.1 RefSeq gene 762049 765999 . + . ID=gene-AL55_RS09170;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AL55_RS09170;old_locus_tag=AL55_00697 NZ_KK316828.1 Protein Homology CDS 762049 765999 . + 0 ID=cds-WP_003403413.1;Parent=gene-AL55_RS09170;Dbxref=GenBank:WP_003403413.1;Name=WP_003403413.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003892756.1;locus_tag=AL55_RS09170;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_003403413.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 766076 766376 . + . ID=gene-AL55_RS27985;Name=AL55_RS27985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27985;partial=true;pseudo=true;start_range=.,766076 NZ_KK316828.1 Protein Homology CDS 766076 766376 . + 0 ID=cds-AL55_RS27985;Parent=gene-AL55_RS27985;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585402.1;locus_tag=AL55_RS27985;partial=true;product=amidase family protein;pseudo=true;start_range=.,766076;transl_table=11 NZ_KK316828.1 RefSeq gene 766363 768276 . - . ID=gene-AL55_RS09175;Name=AL55_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09175;old_locus_tag=AL55_00698 NZ_KK316828.1 Protein Homology CDS 766363 768276 . - 0 ID=cds-WP_003900995.1;Parent=gene-AL55_RS09175;Dbxref=GenBank:WP_003900995.1;Name=WP_003900995.1;Ontology_term=GO:0046514,GO:0017040;gbkey=CDS;go_function=N-acylsphingosine amidohydrolase activity|0017040||IEA;go_process=ceramide catabolic process|0046514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215183.1;locus_tag=AL55_RS09175;product=neutral ceramidase;protein_id=WP_003900995.1;transl_table=11 NZ_KK316828.1 RefSeq gene 768471 769229 . + . ID=gene-AL55_RS09180;Name=end;gbkey=Gene;gene=end;gene_biotype=protein_coding;locus_tag=AL55_RS09180;old_locus_tag=AL55_00699 NZ_KK316828.1 Protein Homology CDS 768471 769229 . + 0 ID=cds-WP_003403419.1;Parent=gene-AL55_RS09180;Dbxref=GenBank:WP_003403419.1;Name=WP_003403419.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=end;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215184.1;locus_tag=AL55_RS09180;product=deoxyribonuclease IV;protein_id=WP_003403419.1;transl_table=11 NZ_KK316828.1 RefSeq gene 769261 770103 . + . ID=gene-AL55_RS09185;Name=lpqP;gbkey=Gene;gene=lpqP;gene_biotype=protein_coding;locus_tag=AL55_RS09185;old_locus_tag=AL55_00700 NZ_KK316828.1 Protein Homology CDS 769261 770103 . + 0 ID=cds-WP_003403421.1;Parent=gene-AL55_RS09185;Dbxref=GenBank:WP_003403421.1;Name=WP_003403421.1;Ontology_term=GO:0052689;gbkey=CDS;gene=lpqP;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215185.1;locus_tag=AL55_RS09185;product=CE1 family esterase;protein_id=WP_003403421.1;transl_table=11 NZ_KK316828.1 RefSeq gene 770163 771791 . + . ID=gene-AL55_RS09190;Name=AL55_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09190;old_locus_tag=AL55_00701 NZ_KK316828.1 Protein Homology CDS 770163 771791 . + 0 ID=cds-WP_003403423.1;Parent=gene-AL55_RS09190;Dbxref=GenBank:WP_003403423.1;Name=WP_003403423.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215186.1;locus_tag=AL55_RS09190;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003403423.1;transl_table=11 NZ_KK316828.1 RefSeq gene 771802 772740 . + . ID=gene-AL55_RS09195;Name=AL55_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09195;old_locus_tag=AL55_00702 NZ_KK316828.1 Protein Homology CDS 771802 772740 . + 0 ID=cds-WP_003905366.1;Parent=gene-AL55_RS09195;Dbxref=GenBank:WP_003905366.1;Name=WP_003905366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215187.1;locus_tag=AL55_RS09195;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003905366.1;transl_table=11 NZ_KK316828.1 RefSeq gene 772743 773465 . + . ID=gene-AL55_RS09200;Name=AL55_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09200;old_locus_tag=AL55_00703 NZ_KK316828.1 Protein Homology CDS 772743 773465 . + 0 ID=cds-WP_003403429.1;Parent=gene-AL55_RS09200;Dbxref=GenBank:WP_003403429.1;Name=WP_003403429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215188.1;locus_tag=AL55_RS09200;product=PaaX family transcriptional regulator C-terminal domain-containing protein;protein_id=WP_003403429.1;transl_table=11 NZ_KK316828.1 RefSeq gene 773462 774253 . + . ID=gene-AL55_RS09205;Name=AL55_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09205;old_locus_tag=AL55_00704 NZ_KK316828.1 Protein Homology CDS 773462 774253 . + 0 ID=cds-WP_003403433.1;Parent=gene-AL55_RS09205;Dbxref=GenBank:WP_003403433.1;Name=WP_003403433.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177745.1;locus_tag=AL55_RS09205;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003403433.1;transl_table=11 NZ_KK316828.1 RefSeq gene 774265 777159 . - . ID=gene-AL55_RS09210;Name=mmpL5;gbkey=Gene;gene=mmpL5;gene_biotype=protein_coding;locus_tag=AL55_RS09210;old_locus_tag=AL55_00705 NZ_KK316828.1 Protein Homology CDS 774265 777159 . - 0 ID=cds-WP_003905367.1;Parent=gene-AL55_RS09210;Dbxref=GenBank:WP_003905367.1;Name=WP_003905367.1;gbkey=CDS;gene=mmpL5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215190.1;locus_tag=AL55_RS09210;product=siderophore RND transporter MmpL5;protein_id=WP_003905367.1;transl_table=11 NZ_KK316828.1 RefSeq gene 777156 777584 . - . ID=gene-AL55_RS09215;Name=mmpS5;gbkey=Gene;gene=mmpS5;gene_biotype=protein_coding;locus_tag=AL55_RS09215;old_locus_tag=AL55_00706 NZ_KK316828.1 Protein Homology CDS 777156 777584 . - 0 ID=cds-WP_003403439.1;Parent=gene-AL55_RS09215;Dbxref=GenBank:WP_003403439.1;Name=WP_003403439.1;gbkey=CDS;gene=mmpS5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215191.1;locus_tag=AL55_RS09215;product=siderophore transporter accessory protein MmpS5;protein_id=WP_003403439.1;transl_table=11 NZ_KK316828.1 RefSeq gene 777669 778166 . + . ID=gene-AL55_RS09220;Name=mmpR5;gbkey=Gene;gene=mmpR5;gene_biotype=protein_coding;locus_tag=AL55_RS09220;old_locus_tag=AL55_00707 NZ_KK316828.1 Protein Homology CDS 777669 778166 . + 0 ID=cds-WP_003403442.1;Parent=gene-AL55_RS09220;Dbxref=GenBank:WP_003403442.1;Name=WP_003403442.1;gbkey=CDS;gene=mmpR5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215192.1;locus_tag=AL55_RS09220;product=siderophore transport transcriptional regulator MmpR5;protein_id=WP_003403442.1;transl_table=11 NZ_KK316828.1 RefSeq gene 778222 778719 . - . ID=gene-AL55_RS09225;Name=AL55_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09225;old_locus_tag=AL55_00708 NZ_KK316828.1 Protein Homology CDS 778222 778719 . - 0 ID=cds-WP_003901898.1;Parent=gene-AL55_RS09225;Dbxref=GenBank:WP_003901898.1;Name=WP_003901898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215193.1;locus_tag=AL55_RS09225;product=DUF3060 domain-containing protein;protein_id=WP_003901898.1;transl_table=11 NZ_KK316828.1 RefSeq gene 778721 779095 . - . ID=gene-AL55_RS09230;Name=AL55_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09230;old_locus_tag=AL55_00709 NZ_KK316828.1 Protein Homology CDS 778721 779095 . - 0 ID=cds-WP_003403448.1;Parent=gene-AL55_RS09230;Dbxref=GenBank:WP_003403448.1;Name=WP_003403448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215194.1;locus_tag=AL55_RS09230;product=DUF3060 domain-containing protein;protein_id=WP_003403448.1;transl_table=11 NZ_KK316828.1 RefSeq gene 779400 779990 . + . ID=gene-AL55_RS09235;Name=AL55_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09235;old_locus_tag=AL55_00710 NZ_KK316828.1 Protein Homology CDS 779400 779990 . + 0 ID=cds-WP_003403451.1;Parent=gene-AL55_RS09235;Dbxref=GenBank:WP_003403451.1;Name=WP_003403451.1;Ontology_term=GO:0006355,GO:0045892,GO:0046677,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215195.1;locus_tag=AL55_RS09235;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403451.1;transl_table=11 NZ_KK316828.1 RefSeq gene 780239 780613 . + . ID=gene-AL55_RS09240;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AL55_RS09240;old_locus_tag=AL55_00711 NZ_KK316828.1 Protein Homology CDS 780239 780613 . + 0 ID=cds-WP_003403453.1;Parent=gene-AL55_RS09240;Dbxref=GenBank:WP_003403453.1;Name=WP_003403453.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215196.1;locus_tag=AL55_RS09240;product=30S ribosomal protein S12;protein_id=WP_003403453.1;transl_table=11 NZ_KK316828.1 RefSeq gene 780613 781083 . + . ID=gene-AL55_RS09245;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AL55_RS09245;old_locus_tag=AL55_00712 NZ_KK316828.1 Protein Homology CDS 780613 781083 . + 0 ID=cds-WP_003403456.1;Parent=gene-AL55_RS09245;Dbxref=GenBank:WP_003403456.1;Name=WP_003403456.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012084986.1;locus_tag=AL55_RS09245;product=30S ribosomal protein S7;protein_id=WP_003403456.1;transl_table=11 NZ_KK316828.1 RefSeq gene 781164 783269 . + . ID=gene-AL55_RS09250;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AL55_RS09250;old_locus_tag=AL55_00713 NZ_KK316828.1 Protein Homology CDS 781164 783269 . + 0 ID=cds-WP_003898554.1;Parent=gene-AL55_RS09250;Dbxref=GenBank:WP_003898554.1;Name=WP_003898554.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177746.1;locus_tag=AL55_RS09250;product=elongation factor G;protein_id=WP_003898554.1;transl_table=11 NZ_KK316828.1 RefSeq gene 783500 784690 . + . ID=gene-AL55_RS09255;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AL55_RS09255;old_locus_tag=AL55_00714 NZ_KK316828.1 Protein Homology CDS 783500 784690 . + 0 ID=cds-WP_003403463.1;Parent=gene-AL55_RS09255;Dbxref=GenBank:WP_003403463.1;Name=WP_003403463.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005055596.1;locus_tag=AL55_RS09255;product=elongation factor Tu;protein_id=WP_003403463.1;transl_table=11 NZ_KK316828.1 RefSeq gene 784828 785625 . + . ID=gene-AL55_RS09260;Name=AL55_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09260;old_locus_tag=AL55_00715 NZ_KK316828.1 Protein Homology CDS 784828 785625 . + 0 ID=cds-WP_003403465.1;Parent=gene-AL55_RS09260;Dbxref=GenBank:WP_003403465.1;Name=WP_003403465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215200.1;locus_tag=AL55_RS09260;product=SHOCT domain-containing protein;protein_id=WP_003403465.1;transl_table=11 NZ_KK316828.1 RefSeq gene 785778 786605 . + . ID=gene-AL55_RS09265;Name=AL55_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09265;old_locus_tag=AL55_00716 NZ_KK316828.1 Protein Homology CDS 785778 786605 . + 0 ID=cds-WP_003403468.1;Parent=gene-AL55_RS09265;Dbxref=GenBank:WP_003403468.1;Name=WP_003403468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215201.1;locus_tag=AL55_RS09265;product=Rv0687 family mycofactocin-dependent SDR oxidoreductase;protein_id=WP_003403468.1;transl_table=11 NZ_KK316828.1 RefSeq gene 786619 787839 . + . ID=gene-AL55_RS09270;Name=AL55_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09270;old_locus_tag=AL55_00717 NZ_KK316828.1 Protein Homology CDS 786619 787839 . + 0 ID=cds-WP_003901000.1;Parent=gene-AL55_RS09270;Dbxref=GenBank:WP_003901000.1;Name=WP_003901000.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215202.1;locus_tag=AL55_RS09270;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003901000.1;transl_table=11 NZ_KK316828.1 RefSeq gene 787851 788099 . + . ID=gene-AL55_RS27205;Name=AL55_RS27205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27205 NZ_KK316828.1 GeneMarkS-2+ CDS 787851 788099 . + 0 ID=cds-WP_178121162.1;Parent=gene-AL55_RS27205;Dbxref=GenBank:WP_178121162.1;Name=WP_178121162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS27205;product=hypothetical protein;protein_id=WP_178121162.1;transl_table=11 NZ_KK316828.1 RefSeq gene 788703 789752 . - . ID=gene-AL55_RS09280;Name=AL55_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09280;old_locus_tag=AL55_00719 NZ_KK316828.1 Protein Homology CDS 788703 789752 . - 0 ID=cds-WP_003403477.1;Parent=gene-AL55_RS09280;Dbxref=GenBank:WP_003403477.1;Name=WP_003403477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215204.1;locus_tag=AL55_RS09280;product=DUF2332 domain-containing protein;protein_id=WP_003403477.1;transl_table=11 NZ_KK316828.1 RefSeq gene 789749 790345 . - . ID=gene-AL55_RS09285;Name=mftR;gbkey=Gene;gene=mftR;gene_biotype=protein_coding;locus_tag=AL55_RS09285;old_locus_tag=AL55_00720 NZ_KK316828.1 Protein Homology CDS 789749 790345 . - 0 ID=cds-WP_003905369.1;Parent=gene-AL55_RS09285;Dbxref=GenBank:WP_003905369.1;Name=WP_003905369.1;Note=MftR%2C the mycofactocin system transcriptional regulator%2C is an uncharacterized TetR family DNA-binding transcription factor. Its role is inferred by context. It occurs as part of the biosynthesis locus for mycofactocin%2C a partially characterized electron carrier derived from the terminal Val-Tyr dipeptide of the precursor peptide MftA%2C through a radical SAM enzyme-mediated process.;Ontology_term=GO:0006355,GO:0003700,GO:0036042;gbkey=CDS;gene=mftR;go_function=DNA-binding transcription factor activity|0003700||IEA,long-chain fatty acyl-CoA binding|0036042||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215205.1;locus_tag=AL55_RS09285;product=mycofactocin system transcriptional regulator;protein_id=WP_003905369.1;transl_table=11 NZ_KK316828.1 RefSeq gene 790436 790525 . + . ID=gene-AL55_RS26880;Name=mftA;gbkey=Gene;gene=mftA;gene_biotype=protein_coding;locus_tag=AL55_RS26880 NZ_KK316828.1 Protein Homology CDS 790436 790525 . + 0 ID=cds-WP_003403483.1;Parent=gene-AL55_RS26880;Dbxref=GenBank:WP_003403483.1;Name=WP_003403483.1;Note=Mycofactocin is a small molecule electron carrier derived from the final two amino acids%2C Val-Tyr%2C of MftA%2C the mycofactocin precursor. It plays a role in redox homeostasis and the metabolism of alcohols and aldehydes in Actinobacteria%2C including Mycobacterium tuberculosis.;Ontology_term=GO:0140604,GO:0009055;gbkey=CDS;gene=mftA;go_function=electron transfer activity|0009055||IEA;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409348.2;locus_tag=AL55_RS26880;product=mycofactocin precursor MftA;protein_id=WP_003403483.1;transl_table=11 NZ_KK316828.1 RefSeq gene 790510 790839 . + . ID=gene-AL55_RS09290;Name=mftB;gbkey=Gene;gene=mftB;gene_biotype=protein_coding;locus_tag=AL55_RS09290;old_locus_tag=AL55_00722 NZ_KK316828.1 Protein Homology CDS 790510 790839 . + 0 ID=cds-WP_003403486.1;Parent=gene-AL55_RS09290;Dbxref=GenBank:WP_003403486.1;Name=WP_003403486.1;Note=MftB%2C a small protein%2C is a peptide chaperone that assists the radical SAM enzyme MftC in performing two modifications to the C-terminal Val-Tyr dipeptide of the mycofactocin precursor peptide%2C MftA. MftB's role is analogous to the role of PqqD in the biosynthesis of PQQ%2C a cofactor that derives entirely from a Tyr and a Glu in the precursor PqqA.;Ontology_term=GO:0140604,GO:0042277;gbkey=CDS;gene=mftB;go_function=peptide binding|0042277||IEA;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215206.1;locus_tag=AL55_RS09290;product=mycofactocin biosynthesis chaperone MftB;protein_id=WP_003403486.1;transl_table=11 NZ_KK316828.1 RefSeq gene 790836 792011 . + . ID=gene-AL55_RS09295;Name=mftC;gbkey=Gene;gene=mftC;gene_biotype=protein_coding;locus_tag=AL55_RS09295;old_locus_tag=AL55_00723 NZ_KK316828.1 Protein Homology CDS 790836 792011 . + 0 ID=cds-WP_003403490.1;Parent=gene-AL55_RS09295;Dbxref=GenBank:WP_003403490.1;Name=WP_003403490.1;Note=MftC is a radical SAM/SPASM enzyme that catalyzes the first two steps in biosynthesis of the electron carrier mycofactocin from the terminal Val-Tyr dipeptide of the precursor peptide MftA.;Ontology_term=GO:0031179,GO:0140604,GO:0051539;gbkey=CDS;gene=mftC;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptide modification|0031179||IEA,mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215207.1;locus_tag=AL55_RS09295;product=mycofactocin radical SAM maturase;protein_id=WP_003403490.1;transl_table=11 NZ_KK316828.1 RefSeq gene 792014 793204 . + . ID=gene-AL55_RS09300;Name=mftD;gbkey=Gene;gene=mftD;gene_biotype=protein_coding;locus_tag=AL55_RS09300;old_locus_tag=AL55_00724 NZ_KK316828.1 Protein Homology CDS 792014 793204 . + 0 ID=cds-WP_003898557.1;Parent=gene-AL55_RS09300;Dbxref=GenBank:WP_003898557.1;Name=WP_003898557.1;Note=MftD%2C an enzyme found in the mycofactocin biosynthesis locus%2C performs an oxidative deamination of 3-amino-5-[(p-hydroxyphenyl)methyl]-4%2C4-dimethyl-2-pyrrolidinone (AHDP). The resulting compound%2C now called pre-mycofactocin (PMFT)%2C is a biologically active redox cofactor that can oxidize the non-exchangeable NADH of TIGR03971 family SDR-type oxidoreductases.;Ontology_term=GO:0140604;gbkey=CDS;gene=mftD;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215208.1;locus_tag=AL55_RS09300;product=pre-mycofactocin synthase MftD;protein_id=WP_003898557.1;transl_table=11 NZ_KK316828.1 RefSeq gene 793394 794149 . + . ID=gene-AL55_RS09305;Name=mftE;gbkey=Gene;gene=mftE;gene_biotype=protein_coding;locus_tag=AL55_RS09305;old_locus_tag=AL55_00725 NZ_KK316828.1 Protein Homology CDS 793394 794149 . + 0 ID=cds-WP_003403497.1;Parent=gene-AL55_RS09305;Dbxref=GenBank:WP_003403497.1;Name=WP_003403497.1;Ontology_term=GO:0140604;gbkey=CDS;gene=mftE;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215209.1;locus_tag=AL55_RS09305;product=mycofactocin biosynthesis peptidyl-dipeptidase MftE;protein_id=WP_003403497.1;transl_table=11 NZ_KK316828.1 RefSeq gene 794198 795610 . + . ID=gene-AL55_RS09310;Name=mftF;gbkey=Gene;gene=mftF;gene_biotype=protein_coding;locus_tag=AL55_RS09310;old_locus_tag=AL55_00726 NZ_KK316828.1 Protein Homology CDS 794198 795610 . + 0 ID=cds-WP_003403501.1;Parent=gene-AL55_RS09310;Dbxref=GenBank:WP_003403501.1;Name=WP_003403501.1;Note=Members of this protein family%2C MftF%2C are glycosyltransferases%2C members of PF00535 (glycosyl transferase family 2). The encoding gene is found as part of the mycofactocin cassette%2C in Mycobacterium tuberculosis%2C many other Actinobacteria%2C and occasional members of other lineages. Mycofactocin itself%2C a putative redox carrier%2C is a heavily modified derivative of the C-terminal Val-Tyr dipeptide of the mycofactocin precursor MftA (TIGR03969).;Ontology_term=GO:0140604,GO:0016740;gbkey=CDS;gene=mftF;go_function=transferase activity|0016740||IEA;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215210.1;locus_tag=AL55_RS09310;product=mycofactocin biosynthesis glycosyltransferase MftF;protein_id=WP_003403501.1;transl_table=11 NZ_KK316828.1 RefSeq gene 795612 797051 . + . ID=gene-AL55_RS09315;Name=mftG;gbkey=Gene;gene=mftG;gene_biotype=protein_coding;locus_tag=AL55_RS09315;old_locus_tag=AL55_00727 NZ_KK316828.1 Protein Homology CDS 795612 797051 . + 0 ID=cds-WP_003901900.1;Parent=gene-AL55_RS09315;Dbxref=GenBank:WP_003901900.1;Name=WP_003901900.1;Ontology_term=GO:0016614;gbkey=CDS;gene=mftG;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215211.1;locus_tag=AL55_RS09315;product=mycofactocin dehydrogenase MftG;protein_id=WP_003901900.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 797327 797473 . + . ID=gene-AL55_RS25605;Name=AL55_RS25605;end_range=797473,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25605;partial=true;pseudo=true;start_range=.,797327 NZ_KK316828.1 Protein Homology CDS 797327 797473 . + 0 ID=cds-AL55_RS25605;Parent=gene-AL55_RS25605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=797473,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491516.1;locus_tag=AL55_RS25605;partial=true;product=transposase;pseudo=true;start_range=.,797327;transl_table=11 NZ_KK316828.1 RefSeq gene 798308 798529 . + . ID=gene-AL55_RS25615;Name=AL55_RS25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25615;old_locus_tag=AL55_00729 NZ_KK316828.1 Protein Homology CDS 798308 798529 . + 0 ID=cds-WP_003910987.1;Parent=gene-AL55_RS25615;Dbxref=GenBank:WP_003910987.1;Name=WP_003910987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215213.1;locus_tag=AL55_RS25615;product=hypothetical protein;protein_id=WP_003910987.1;transl_table=11 NZ_KK316828.1 RefSeq gene 798783 799013 . - . ID=gene-AL55_RS27560;Name=AL55_RS27560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27560 NZ_KK316828.1 Protein Homology CDS 798783 799013 . - 0 ID=cds-WP_003403573.1;Parent=gene-AL55_RS27560;Dbxref=GenBank:WP_003403573.1;Name=WP_003403573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403573.1;locus_tag=AL55_RS27560;product=hypothetical protein;protein_id=WP_003403573.1;transl_table=11 NZ_KK316828.1 RefSeq gene 799166 799471 . + . ID=gene-AL55_RS09330;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AL55_RS09330;old_locus_tag=AL55_00730 NZ_KK316828.1 Protein Homology CDS 799166 799471 . + 0 ID=cds-WP_003403578.1;Parent=gene-AL55_RS09330;Dbxref=GenBank:WP_003403578.1;Name=WP_003403578.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009948626.1;locus_tag=AL55_RS09330;product=30S ribosomal protein S10;protein_id=WP_003403578.1;transl_table=11 NZ_KK316828.1 RefSeq gene 799488 800141 . + . ID=gene-AL55_RS09335;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AL55_RS09335;old_locus_tag=AL55_00731 NZ_KK316828.1 Protein Homology CDS 799488 800141 . + 0 ID=cds-WP_003403579.1;Parent=gene-AL55_RS09335;Dbxref=GenBank:WP_003403579.1;Name=WP_003403579.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215215.1;locus_tag=AL55_RS09335;product=50S ribosomal protein L3;protein_id=WP_003403579.1;transl_table=11 NZ_KK316828.1 RefSeq gene 800141 800812 . + . ID=gene-AL55_RS09340;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AL55_RS09340;old_locus_tag=AL55_00732 NZ_KK316828.1 Protein Homology CDS 800141 800812 . + 0 ID=cds-WP_003403580.1;Parent=gene-AL55_RS09340;Dbxref=GenBank:WP_003403580.1;Name=WP_003403580.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215216.1;locus_tag=AL55_RS09340;product=50S ribosomal protein L4;protein_id=WP_003403580.1;transl_table=11 NZ_KK316828.1 RefSeq gene 800812 801114 . + . ID=gene-AL55_RS09345;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AL55_RS09345;old_locus_tag=AL55_00733 NZ_KK316828.1 Protein Homology CDS 800812 801114 . + 0 ID=cds-WP_003403581.1;Parent=gene-AL55_RS09345;Dbxref=GenBank:WP_003403581.1;Name=WP_003403581.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215217.1;locus_tag=AL55_RS09345;product=50S ribosomal protein L23;protein_id=WP_003403581.1;transl_table=11 NZ_KK316828.1 RefSeq gene 801369 802211 . + . ID=gene-AL55_RS09355;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AL55_RS09355;old_locus_tag=AL55_00734 NZ_KK316828.1 Protein Homology CDS 801369 802211 . + 0 ID=cds-WP_003403582.1;Parent=gene-AL55_RS09355;Dbxref=GenBank:WP_003403582.1;Name=WP_003403582.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215218.1;locus_tag=AL55_RS09355;product=50S ribosomal protein L2;protein_id=WP_003403582.1;transl_table=11 NZ_KK316828.1 RefSeq gene 802252 802533 . + . ID=gene-AL55_RS09360;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AL55_RS09360;old_locus_tag=AL55_00735 NZ_KK316828.1 Protein Homology CDS 802252 802533 . + 0 ID=cds-WP_003403584.1;Parent=gene-AL55_RS09360;Dbxref=GenBank:WP_003403584.1;Name=WP_003403584.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215219.1;locus_tag=AL55_RS09360;product=30S ribosomal protein S19;protein_id=WP_003403584.1;transl_table=11 NZ_KK316828.1 RefSeq gene 802530 803123 . + . ID=gene-AL55_RS09365;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AL55_RS09365;old_locus_tag=AL55_00736 NZ_KK316828.1 Protein Homology CDS 802530 803123 . + 0 ID=cds-WP_003403587.1;Parent=gene-AL55_RS09365;Dbxref=GenBank:WP_003403587.1;Name=WP_003403587.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215220.1;locus_tag=AL55_RS09365;product=50S ribosomal protein L22;protein_id=WP_003403587.1;transl_table=11 NZ_KK316828.1 RefSeq gene 803123 803947 . + . ID=gene-AL55_RS09370;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AL55_RS09370;old_locus_tag=AL55_00737 NZ_KK316828.1 Protein Homology CDS 803123 803947 . + 0 ID=cds-WP_003403590.1;Parent=gene-AL55_RS09370;Dbxref=GenBank:WP_003403590.1;Name=WP_003403590.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215221.1;locus_tag=AL55_RS09370;product=30S ribosomal protein S3;protein_id=WP_003403590.1;transl_table=11 NZ_KK316828.1 RefSeq gene 803951 804367 . + . ID=gene-AL55_RS09375;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AL55_RS09375;old_locus_tag=AL55_00738 NZ_KK316828.1 Protein Homology CDS 803951 804367 . + 0 ID=cds-WP_003403592.1;Parent=gene-AL55_RS09375;Dbxref=GenBank:WP_003403592.1;Name=WP_003403592.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215222.1;locus_tag=AL55_RS09375;product=50S ribosomal protein L16;protein_id=WP_003403592.1;transl_table=11 NZ_KK316828.1 RefSeq gene 804367 804600 . + . ID=gene-AL55_RS09380;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AL55_RS09380;old_locus_tag=AL55_00739 NZ_KK316828.1 Protein Homology CDS 804367 804600 . + 0 ID=cds-WP_003403594.1;Parent=gene-AL55_RS09380;Dbxref=GenBank:WP_003403594.1;Name=WP_003403594.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215223.1;locus_tag=AL55_RS09380;product=50S ribosomal protein L29;protein_id=WP_003403594.1;transl_table=11 NZ_KK316828.1 RefSeq gene 804597 805007 . + . ID=gene-AL55_RS09385;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AL55_RS09385;old_locus_tag=AL55_00740 NZ_KK316828.1 Protein Homology CDS 804597 805007 . + 0 ID=cds-WP_003403596.1;Parent=gene-AL55_RS09385;Dbxref=GenBank:WP_003403596.1;Name=WP_003403596.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215224.1;locus_tag=AL55_RS09385;product=30S ribosomal protein S17;protein_id=WP_003403596.1;transl_table=11 NZ_KK316828.1 RefSeq gene 805176 807539 . + . ID=gene-AL55_RS09390;Name=atsA;gbkey=Gene;gene=atsA;gene_biotype=protein_coding;locus_tag=AL55_RS09390;old_locus_tag=AL55_00741 NZ_KK316828.1 Protein Homology CDS 805176 807539 . + 0 ID=cds-WP_003898561.1;Parent=gene-AL55_RS09390;Dbxref=GenBank:WP_003898561.1;Name=WP_003898561.1;gbkey=CDS;gene=atsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215225.1;locus_tag=AL55_RS09390;product=arylsulfatase AtsA;protein_id=WP_003898561.1;transl_table=11 NZ_KK316828.1 RefSeq gene 807587 808486 . + . ID=gene-AL55_RS09395;Name=AL55_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09395;old_locus_tag=AL55_00742 NZ_KK316828.1 Protein Homology CDS 807587 808486 . + 0 ID=cds-WP_003403610.1;Parent=gene-AL55_RS09395;Dbxref=GenBank:WP_003403610.1;Name=WP_003403610.1;Ontology_term=GO:0016670,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C oxygen as acceptor|0016670||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215226.1;locus_tag=AL55_RS09395;product=formylglycine-generating enzyme family protein;protein_id=WP_003403610.1;transl_table=11 NZ_KK316828.1 RefSeq gene 808787 809728 . + . ID=gene-AL55_RS09400;Name=AL55_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09400;old_locus_tag=AL55_00743 NZ_KK316828.1 Protein Homology CDS 808787 809728 . + 0 ID=cds-WP_031695368.1;Parent=gene-AL55_RS09400;Dbxref=GenBank:WP_031695368.1;Name=WP_031695368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215227.1;locus_tag=AL55_RS09400;product=DUF4436 domain-containing protein;protein_id=WP_031695368.1;transl_table=11 NZ_KK316828.1 RefSeq gene 810214 810582 . + . ID=gene-AL55_RS09405;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AL55_RS09405;old_locus_tag=AL55_00744 NZ_KK316828.1 Protein Homology CDS 810214 810582 . + 0 ID=cds-WP_003403649.1;Parent=gene-AL55_RS09405;Dbxref=GenBank:WP_003403649.1;Name=WP_003403649.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1;locus_tag=AL55_RS09405;product=50S ribosomal protein L14;protein_id=WP_003403649.1;transl_table=11 NZ_KK316828.1 RefSeq gene 810583 810900 . + . ID=gene-AL55_RS09410;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AL55_RS09410;old_locus_tag=AL55_00745 NZ_KK316828.1 Protein Homology CDS 810583 810900 . + 0 ID=cds-WP_003403654.1;Parent=gene-AL55_RS09410;Dbxref=GenBank:WP_003403654.1;Name=WP_003403654.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215229.1;locus_tag=AL55_RS09410;product=50S ribosomal protein L24;protein_id=WP_003403654.1;transl_table=11 NZ_KK316828.1 RefSeq gene 810900 811463 . + . ID=gene-AL55_RS09415;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AL55_RS09415;old_locus_tag=AL55_00746 NZ_KK316828.1 Protein Homology CDS 810900 811463 . + 0 ID=cds-WP_003403660.1;Parent=gene-AL55_RS09415;Dbxref=GenBank:WP_003403660.1;Name=WP_003403660.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215230.1;locus_tag=AL55_RS09415;product=50S ribosomal protein L5;protein_id=WP_003403660.1;transl_table=11 NZ_KK316828.1 RefSeq gene 811468 811653 . + . ID=gene-AL55_RS09420;Name=AL55_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09420;old_locus_tag=AL55_00747 NZ_KK316828.1 Protein Homology CDS 811468 811653 . + 0 ID=cds-WP_003403667.1;Parent=gene-AL55_RS09420;Dbxref=GenBank:WP_003403667.1;Name=WP_003403667.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003948630.1;locus_tag=AL55_RS09420;product=type Z 30S ribosomal protein S14;protein_id=WP_003403667.1;transl_table=11 NZ_KK316828.1 RefSeq gene 811817 812215 . + . ID=gene-AL55_RS09425;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AL55_RS09425;old_locus_tag=AL55_00748 NZ_KK316828.1 Protein Homology CDS 811817 812215 . + 0 ID=cds-WP_003403669.1;Parent=gene-AL55_RS09425;Dbxref=GenBank:WP_003403669.1;Name=WP_003403669.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908572.1;locus_tag=AL55_RS09425;product=30S ribosomal protein S8;protein_id=WP_003403669.1;transl_table=11 NZ_KK316828.1 RefSeq gene 812239 812778 . + . ID=gene-AL55_RS09430;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AL55_RS09430;old_locus_tag=AL55_00749 NZ_KK316828.1 Protein Homology CDS 812239 812778 . + 0 ID=cds-WP_003403673.1;Parent=gene-AL55_RS09430;Dbxref=GenBank:WP_003403673.1;Name=WP_003403673.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908571.1;locus_tag=AL55_RS09430;product=50S ribosomal protein L6;protein_id=WP_003403673.1;transl_table=11 NZ_KK316828.1 RefSeq gene 812781 813149 . + . ID=gene-AL55_RS09435;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AL55_RS09435;old_locus_tag=AL55_00750 NZ_KK316828.1 Protein Homology CDS 812781 813149 . + 0 ID=cds-WP_003403677.1;Parent=gene-AL55_RS09435;Dbxref=GenBank:WP_003403677.1;Name=WP_003403677.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215234.1;locus_tag=AL55_RS09435;product=50S ribosomal protein L18;protein_id=WP_003403677.1;transl_table=11 NZ_KK316828.1 RefSeq gene 813169 813831 . + . ID=gene-AL55_RS09440;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AL55_RS09440;old_locus_tag=AL55_00751 NZ_KK316828.1 Protein Homology CDS 813169 813831 . + 0 ID=cds-WP_003403680.1;Parent=gene-AL55_RS09440;Dbxref=GenBank:WP_003403680.1;Name=WP_003403680.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215235.1;locus_tag=AL55_RS09440;product=30S ribosomal protein S5;protein_id=WP_003403680.1;transl_table=11 NZ_KK316828.1 RefSeq gene 813834 814031 . + . ID=gene-AL55_RS09445;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AL55_RS09445;old_locus_tag=AL55_00752 NZ_KK316828.1 Protein Homology CDS 813834 814031 . + 0 ID=cds-WP_003403683.1;Parent=gene-AL55_RS09445;Dbxref=GenBank:WP_003403683.1;Name=WP_003403683.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215236.1;locus_tag=AL55_RS09445;product=50S ribosomal protein L30;protein_id=WP_003403683.1;transl_table=11 NZ_KK316828.1 RefSeq gene 814031 814471 . + . ID=gene-AL55_RS09450;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AL55_RS09450;old_locus_tag=AL55_00753 NZ_KK316828.1 Protein Homology CDS 814031 814471 . + 0 ID=cds-WP_003898563.1;Parent=gene-AL55_RS09450;Dbxref=GenBank:WP_003898563.1;Name=WP_003898563.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215237.1;locus_tag=AL55_RS09450;product=50S ribosomal protein L15;protein_id=WP_003898563.1;transl_table=11 NZ_KK316828.1 RefSeq gene 814573 816375 . + . ID=gene-AL55_RS09455;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=AL55_RS09455;old_locus_tag=AL55_00754 NZ_KK316828.1 Protein Homology CDS 814573 816375 . + 0 ID=cds-WP_003403686.1;Parent=gene-AL55_RS09455;Dbxref=GenBank:WP_003403686.1;Name=WP_003403686.1;Ontology_term=GO:0006465,GO:0006508,GO:0008233,GO:0016020;gbkey=CDS;gene=sppA;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003879455.1;locus_tag=AL55_RS09455;product=signal peptide peptidase SppA;protein_id=WP_003403686.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 816372 817285 . - . ID=gene-AL55_RS09460;Name=AL55_RS09460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS09460;old_locus_tag=AL55_00756;pseudo=true NZ_KK316828.1 Protein Homology CDS 816372 817285 . - 0 ID=cds-AL55_RS09460;Parent=gene-AL55_RS09460;Note=frameshifted;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020727409.1;locus_tag=AL55_RS09460;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 817378 818481 . - . ID=gene-AL55_RS09465;Name=AL55_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09465;old_locus_tag=AL55_00757 NZ_KK316828.1 Protein Homology CDS 817378 818481 . - 0 ID=cds-WP_003403691.1;Parent=gene-AL55_RS09465;Dbxref=GenBank:WP_003403691.1;Name=WP_003403691.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215240.1;locus_tag=AL55_RS09465;product=class I SAM-dependent methyltransferase;protein_id=WP_003403691.1;transl_table=11 NZ_KK316828.1 RefSeq gene 818684 819340 . - . ID=gene-AL55_RS09470;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=AL55_RS09470;old_locus_tag=AL55_00758 NZ_KK316828.1 Protein Homology CDS 818684 819340 . - 0 ID=cds-WP_003403695.1;Parent=gene-AL55_RS09470;Dbxref=GenBank:WP_003403695.1;Name=WP_003403695.1;gbkey=CDS;gene=fucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215241.1;locus_tag=AL55_RS09470;product=L-fuculose-phosphate aldolase;protein_id=WP_003403695.1;transl_table=11 NZ_KK316828.1 RefSeq gene 819337 820317 . - . ID=gene-AL55_RS09475;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AL55_RS09475;old_locus_tag=AL55_00759 NZ_KK316828.1 Protein Homology CDS 819337 820317 . - 0 ID=cds-WP_003403698.1;Parent=gene-AL55_RS09475;Dbxref=GenBank:WP_003403698.1;Name=WP_003403698.1;gbkey=CDS;gene=serA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215242.1;locus_tag=AL55_RS09475;product=D-3-phosphoglycerate dehydrogenase SerA;protein_id=WP_003403698.1;transl_table=11 NZ_KK316828.1 RefSeq gene 820348 821694 . + . ID=gene-AL55_RS09480;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AL55_RS09480;old_locus_tag=AL55_00760 NZ_KK316828.1 Protein Homology CDS 820348 821694 . + 0 ID=cds-WP_003900204.1;Parent=gene-AL55_RS09480;Dbxref=GenBank:WP_003900204.1;Name=WP_003900204.1;gbkey=CDS;gene=xylB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215243.1;locus_tag=AL55_RS09480;product=D-xylulose kinase;protein_id=WP_003900204.1;transl_table=11 NZ_KK316828.1 RefSeq gene 821749 822435 . + . ID=gene-AL55_RS09485;Name=AL55_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09485;old_locus_tag=AL55_00761 NZ_KK316828.1 Protein Homology CDS 821749 822435 . + 0 ID=cds-WP_009935961.1;Parent=gene-AL55_RS09485;Dbxref=GenBank:WP_009935961.1;Name=WP_009935961.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935961.1;locus_tag=AL55_RS09485;product=GNAT family N-acetyltransferase;protein_id=WP_009935961.1;transl_table=11 NZ_KK316828.1 RefSeq gene 822524 823480 . - . ID=gene-AL55_RS09490;Name=AL55_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09490;old_locus_tag=AL55_00762 NZ_KK316828.1 Protein Homology CDS 822524 823480 . - 0 ID=cds-WP_003403717.1;Parent=gene-AL55_RS09490;Dbxref=GenBank:WP_003403717.1;Name=WP_003403717.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215245.1;locus_tag=AL55_RS09490;product=class I SAM-dependent methyltransferase;protein_id=WP_003403717.1;transl_table=11 NZ_KK316828.1 RefSeq gene 823641 824966 . + . ID=gene-AL55_RS09495;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AL55_RS09495;old_locus_tag=AL55_00763 NZ_KK316828.1 Protein Homology CDS 823641 824966 . + 0 ID=cds-WP_003403723.1;Parent=gene-AL55_RS09495;Dbxref=GenBank:WP_003403723.1;Name=WP_003403723.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215246.1;locus_tag=AL55_RS09495;product=preprotein translocase subunit SecY;protein_id=WP_003403723.1;transl_table=11 NZ_KK316828.1 RefSeq gene 824963 825508 . + . ID=gene-AL55_RS09500;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AL55_RS09500;old_locus_tag=AL55_00764 NZ_KK316828.1 Protein Homology CDS 824963 825508 . + 0 ID=cds-WP_003403726.1;Parent=gene-AL55_RS09500;Dbxref=GenBank:WP_003403726.1;Name=WP_003403726.1;Ontology_term=GO:0006139,GO:0005524,GO:0019205;gbkey=CDS;gene=adk;go_function=ATP binding|0005524||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215247.1;locus_tag=AL55_RS09500;product=adenylate kinase;protein_id=WP_003403726.1;transl_table=11 NZ_KK316828.1 RefSeq gene 825511 826311 . + . ID=gene-AL55_RS09505;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AL55_RS09505;old_locus_tag=AL55_00765 NZ_KK316828.1 Protein Homology CDS 825511 826311 . + 0 ID=cds-WP_003403728.1;Parent=gene-AL55_RS09505;Dbxref=GenBank:WP_003403728.1;Name=WP_003403728.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177748.1;locus_tag=AL55_RS09505;product=type I methionyl aminopeptidase;protein_id=WP_003403728.1;transl_table=11 NZ_KK316828.1 RefSeq gene 826384 826917 . + . ID=gene-AL55_RS09510;Name=sigL;gbkey=Gene;gene=sigL;gene_biotype=protein_coding;locus_tag=AL55_RS09510;old_locus_tag=AL55_00766 NZ_KK316828.1 Protein Homology CDS 826384 826917 . + 0 ID=cds-WP_003403731.1;Parent=gene-AL55_RS09510;Dbxref=GenBank:WP_003403731.1;Name=WP_003403731.1;gbkey=CDS;gene=sigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215249.1;locus_tag=AL55_RS09510;product=sigma-70 family RNA polymerase sigma factor SigL;protein_id=WP_003403731.1;transl_table=11 NZ_KK316828.1 RefSeq gene 826981 827733 . + . ID=gene-AL55_RS09515;Name=rslA;gbkey=Gene;gene=rslA;gene_biotype=protein_coding;locus_tag=AL55_RS09515;old_locus_tag=AL55_00767 NZ_KK316828.1 Protein Homology CDS 826981 827733 . + 0 ID=cds-WP_003403733.1;Parent=gene-AL55_RS09515;Dbxref=GenBank:WP_003403733.1;Name=WP_003403733.1;gbkey=CDS;gene=rslA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215250.1;locus_tag=AL55_RS09515;product=anti-sigma-L factor RslA;protein_id=WP_003403733.1;transl_table=11 NZ_KK316828.1 RefSeq gene 827788 828000 . + . ID=gene-AL55_RS25620;Name=AL55_RS25620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25620 NZ_KK316828.1 Protein Homology CDS 827788 828000 . + 0 ID=cds-WP_003898567.1;Parent=gene-AL55_RS25620;Dbxref=GenBank:WP_003898567.1;Name=WP_003898567.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898567.1;locus_tag=AL55_RS25620;product=thiamine pyrophosphate-binding protein;protein_id=WP_003898567.1;transl_table=11 NZ_KK316828.1 RefSeq gene 828048 828545 . + . ID=gene-AL55_RS09520;Name=AL55_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09520;old_locus_tag=AL55_00768 NZ_KK316828.1 Protein Homology CDS 828048 828545 . + 0 ID=cds-WP_003403738.1;Parent=gene-AL55_RS09520;Dbxref=GenBank:WP_003403738.1;Name=WP_003403738.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215251.1;locus_tag=AL55_RS09520;product=MarR family transcriptional regulator;protein_id=WP_003403738.1;transl_table=11 NZ_KK316828.1 RefSeq gene 828542 828754 . + . ID=gene-AL55_RS25625;Name=AL55_RS25625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25625 NZ_KK316828.1 Protein Homology CDS 828542 828754 . + 0 ID=cds-WP_003906436.1;Parent=gene-AL55_RS25625;Dbxref=GenBank:WP_003906436.1;Name=WP_003906436.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL55_RS25625;product=PE domain-containing protein;protein_id=WP_003906436.1;transl_table=11 NZ_KK316828.1 RefSeq gene 828903 829451 . + . ID=gene-AL55_RS09525;Name=AL55_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09525;old_locus_tag=AL55_00769 NZ_KK316828.1 Protein Homology CDS 828903 829451 . + 0 ID=cds-WP_003403741.1;Parent=gene-AL55_RS09525;Dbxref=GenBank:WP_003403741.1;Name=WP_003403741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215252.1;locus_tag=AL55_RS09525;product=TIGR03086 family metal-binding protein;protein_id=WP_003403741.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 829471 829614 . - . ID=gene-AL55_RS25630;Name=AL55_RS25630;end_range=829614,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25630;partial=true;pseudo=true;start_range=.,829471 NZ_KK316828.1 Protein Homology CDS 829471 829614 . - 0 ID=cds-AL55_RS25630;Parent=gene-AL55_RS25630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=829614,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403844.1;locus_tag=AL55_RS25630;partial=true;product=3-hydroxyisobutyrate dehydrogenase;pseudo=true;start_range=.,829471;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 829696 830504 . + . ID=gene-AL55_RS09530;Name=AL55_RS09530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS09530;old_locus_tag=AL55_00770;pseudo=true NZ_KK316828.1 Protein Homology CDS 829696 830504 . + 0 ID=cds-AL55_RS09530;Parent=gene-AL55_RS09530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215253.1;locus_tag=AL55_RS09530;product=DUF4226 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 830619 831146 . + . ID=gene-AL55_RS09535;Name=AL55_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09535;old_locus_tag=AL55_00771 NZ_KK316828.1 Protein Homology CDS 830619 831146 . + 0 ID=cds-WP_003901008.1;Parent=gene-AL55_RS09535;Dbxref=GenBank:WP_003901008.1;Name=WP_003901008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215254.1;locus_tag=AL55_RS09535;product=DUF7956 family protein;protein_id=WP_003901008.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 831368 831691 . + . ID=gene-AL55_RS09540;Name=AL55_RS09540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS09540;old_locus_tag=AL55_00772;partial=true;pseudo=true;start_range=.,831368 NZ_KK316828.1 Protein Homology CDS 831368 831691 . + 0 ID=cds-AL55_RS09540;Parent=gene-AL55_RS09540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215829.1;locus_tag=AL55_RS09540;partial=true;product=transposase;pseudo=true;start_range=.,831368;transl_table=11 NZ_KK316828.1 RefSeq gene 831824 832351 . + . ID=gene-AL55_RS09545;Name=AL55_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09545;old_locus_tag=AL55_00773 NZ_KK316828.1 Protein Homology CDS 831824 832351 . + 0 ID=cds-WP_003901009.1;Parent=gene-AL55_RS09545;Dbxref=GenBank:WP_003901009.1;Name=WP_003901009.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177749.1;locus_tag=AL55_RS09545;product=PE family protein;protein_id=WP_003901009.1;transl_table=11 NZ_KK316828.1 RefSeq gene 832729 833286 . - . ID=gene-AL55_RS09550;Name=AL55_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09550;old_locus_tag=AL55_00774 NZ_KK316828.1 Protein Homology CDS 832729 833286 . - 0 ID=cds-WP_003403820.1;Parent=gene-AL55_RS09550;Dbxref=GenBank:WP_003403820.1;Name=WP_003403820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215257.1;locus_tag=AL55_RS09550;product=DUF6036 family nucleotidyltransferase;protein_id=WP_003403820.1;transl_table=11 NZ_KK316828.1 RefSeq gene 833283 833789 . - . ID=gene-AL55_RS09555;Name=AL55_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09555;old_locus_tag=AL55_00775 NZ_KK316828.1 Protein Homology CDS 833283 833789 . - 0 ID=cds-WP_003403827.1;Parent=gene-AL55_RS09555;Dbxref=GenBank:WP_003403827.1;Name=WP_003403827.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215258.1;locus_tag=AL55_RS09555;product=helix-turn-helix domain-containing protein;protein_id=WP_003403827.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 833902 834045 . - . ID=gene-AL55_RS09560;Name=AL55_RS09560;end_range=834045,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS09560;old_locus_tag=AL55_00776;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 833902 834045 . - 0 ID=cds-AL55_RS09560;Parent=gene-AL55_RS09560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=834045,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012392970.1;locus_tag=AL55_RS09560;partial=true;product=3-hydroxyisobutyryl-CoA hydrolase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 834057 834316 . + . ID=gene-AL55_RS27210;Name=AL55_RS27210;end_range=834316,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27210;partial=true;pseudo=true;start_range=.,834057 NZ_KK316828.1 Protein Homology CDS 834057 834316 . + 0 ID=cds-AL55_RS27210;Parent=gene-AL55_RS27210;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=834316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010924697.1;locus_tag=AL55_RS27210;partial=true;product=Zn-binding domain-containing protein;pseudo=true;start_range=.,834057;transl_table=11 NZ_KK316828.1 RefSeq gene 834544 836898 . + . ID=gene-AL55_RS09570;Name=AL55_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09570;old_locus_tag=AL55_00778 NZ_KK316828.1 Protein Homology CDS 834544 836898 . + 0 ID=cds-WP_009940490.1;Parent=gene-AL55_RS09570;Dbxref=GenBank:WP_009940490.1;Name=WP_009940490.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940490.1;locus_tag=AL55_RS09570;product=PE family protein;protein_id=WP_009940490.1;transl_table=11 NZ_KK316828.1 RefSeq gene 837297 839570 . + . ID=gene-AL55_RS09575;Name=AL55_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09575;old_locus_tag=AL55_00779 NZ_KK316828.1 Protein Homology CDS 837297 839570 . + 0 ID=cds-WP_016330384.1;Parent=gene-AL55_RS09575;Dbxref=GenBank:WP_016330384.1;Name=WP_016330384.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177751.1;locus_tag=AL55_RS09575;product=PE family protein;protein_id=WP_016330384.1;transl_table=11 NZ_KK316828.1 RefSeq gene 839661 839918 . + . ID=gene-AL55_RS09580;Name=AL55_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09580;old_locus_tag=AL55_00780 NZ_KK316828.1 Protein Homology CDS 839661 839918 . + 0 ID=cds-WP_003403834.1;Parent=gene-AL55_RS09580;Dbxref=GenBank:WP_003403834.1;Name=WP_003403834.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215262.1;locus_tag=AL55_RS09580;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003403834.1;transl_table=11 NZ_KK316828.1 RefSeq gene 839942 840370 . + . ID=gene-AL55_RS09585;Name=AL55_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09585;old_locus_tag=AL55_00781 NZ_KK316828.1 Protein Homology CDS 839942 840370 . + 0 ID=cds-WP_003403837.1;Parent=gene-AL55_RS09585;Dbxref=GenBank:WP_003403837.1;Name=WP_003403837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215263.1;locus_tag=AL55_RS09585;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403837.1;transl_table=11 NZ_KK316828.1 RefSeq gene 840451 840588 . - . ID=gene-AL55_RS09590;Name=AL55_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09590;old_locus_tag=AL55_00782 NZ_KK316828.1 GeneMarkS-2+ CDS 840451 840588 . - 0 ID=cds-WP_003403839.1;Parent=gene-AL55_RS09590;Dbxref=GenBank:WP_003403839.1;Name=WP_003403839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS09590;product=hypothetical protein;protein_id=WP_003403839.1;transl_table=11 NZ_KK316828.1 RefSeq gene 840747 840992 . + . ID=gene-AL55_RS09595;Name=AL55_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09595;old_locus_tag=AL55_00783 NZ_KK316828.1 Protein Homology CDS 840747 840992 . + 0 ID=cds-WP_003403841.1;Parent=gene-AL55_RS09595;Dbxref=GenBank:WP_003403841.1;Name=WP_003403841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215264.1;locus_tag=AL55_RS09595;product=DUF7956 family protein;protein_id=WP_003403841.1;transl_table=11 NZ_KK316828.1 RefSeq gene 841061 841945 . - . ID=gene-AL55_RS09600;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=AL55_RS09600;old_locus_tag=AL55_00784 NZ_KK316828.1 Protein Homology CDS 841061 841945 . - 0 ID=cds-WP_003403844.1;Parent=gene-AL55_RS09600;Dbxref=GenBank:WP_003403844.1;Name=WP_003403844.1;Ontology_term=GO:0006574,GO:0008442,GO:0051287;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA,NAD binding|0051287||IEA;go_process=L-valine catabolic process|0006574||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215265.1;locus_tag=AL55_RS09600;product=3-hydroxyisobutyrate dehydrogenase;protein_id=WP_003403844.1;transl_table=11 NZ_KK316828.1 RefSeq gene 841956 843128 . - . ID=gene-AL55_RS09605;Name=AL55_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09605;old_locus_tag=AL55_00785 NZ_KK316828.1 Protein Homology CDS 841956 843128 . - 0 ID=cds-WP_003403845.1;Parent=gene-AL55_RS09605;Dbxref=GenBank:WP_003403845.1;Name=WP_003403845.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215266.1;locus_tag=AL55_RS09605;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003403845.1;transl_table=11 NZ_KK316828.1 RefSeq gene 843135 844667 . - . ID=gene-AL55_RS09610;Name=mmsA;gbkey=Gene;gene=mmsA;gene_biotype=protein_coding;locus_tag=AL55_RS09610;old_locus_tag=AL55_00786 NZ_KK316828.1 Protein Homology CDS 843135 844667 . - 0 ID=cds-WP_003403847.1;Parent=gene-AL55_RS09610;Dbxref=GenBank:WP_003403847.1;Name=WP_003403847.1;gbkey=CDS;gene=mmsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215267.1;locus_tag=AL55_RS09610;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_003403847.1;transl_table=11 NZ_KK316828.1 RefSeq gene 844873 846627 . + . ID=gene-AL55_RS09615;Name=AL55_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09615;old_locus_tag=AL55_00787 NZ_KK316828.1 Protein Homology CDS 844873 846627 . + 0 ID=cds-WP_003403850.1;Parent=gene-AL55_RS09615;Dbxref=GenBank:WP_003403850.1;Name=WP_003403850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177752.1;locus_tag=AL55_RS09615;product=phosphoglycerate mutase PE_PGRS11;protein_id=WP_003403850.1;transl_table=11 NZ_KK316828.1 RefSeq gene 846817 848754 . - . ID=gene-AL55_RS09620;Name=AL55_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09620;old_locus_tag=AL55_00788 NZ_KK316828.1 Protein Homology CDS 846817 848754 . - 0 ID=cds-WP_003898574.1;Parent=gene-AL55_RS09620;Dbxref=GenBank:WP_003898574.1;Name=WP_003898574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177753.1;locus_tag=AL55_RS09620;product=PPE family protein;protein_id=WP_003898574.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 849083 849241 . - . ID=gene-AL55_RS09625;Name=AL55_RS09625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS09625;old_locus_tag=AL55_00789;partial=true;pseudo=true;start_range=.,849083 NZ_KK316828.1 Protein Homology CDS 849083 849241 . - 0 ID=cds-AL55_RS09625;Parent=gene-AL55_RS09625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010948855.1;locus_tag=AL55_RS09625;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,849083;transl_table=11 NZ_KK316828.1 RefSeq gene 849356 849427 . - . ID=gene-AL55_RS09630;Name=AL55_RS09630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS09630;old_locus_tag=AL55_00790 NZ_KK316828.1 tRNAscan-SE tRNA 849356 849427 . - . ID=rna-AL55_RS09630;Parent=gene-AL55_RS09630;anticodon=(pos:complement(849393..849395));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS09630;product=tRNA-Thr NZ_KK316828.1 tRNAscan-SE exon 849356 849427 . - . ID=exon-AL55_RS09630-1;Parent=rna-AL55_RS09630;anticodon=(pos:complement(849393..849395));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS09630;product=tRNA-Thr NZ_KK316828.1 RefSeq gene 849455 850180 . - . ID=gene-AL55_RS09635;Name=AL55_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09635;old_locus_tag=AL55_00791 NZ_KK316828.1 Protein Homology CDS 849455 850180 . - 0 ID=cds-WP_003403862.1;Parent=gene-AL55_RS09635;Dbxref=GenBank:WP_003403862.1;Name=WP_003403862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215270.1;locus_tag=AL55_RS09635;product=hypothetical protein;protein_id=WP_003403862.1;transl_table=11 NZ_KK316828.1 RefSeq gene 850322 851065 . + . ID=gene-AL55_RS09640;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=AL55_RS09640;old_locus_tag=AL55_00792 NZ_KK316828.1 Protein Homology CDS 850322 851065 . + 0 ID=cds-WP_003403867.1;Parent=gene-AL55_RS09640;Dbxref=GenBank:WP_003403867.1;Name=WP_003403867.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215271.1;locus_tag=AL55_RS09640;product=two-component system response regulator PhoP;protein_id=WP_003403867.1;transl_table=11 NZ_KK316828.1 RefSeq gene 851110 852567 . + . ID=gene-AL55_RS09645;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=AL55_RS09645;old_locus_tag=AL55_00793 NZ_KK316828.1 Protein Homology CDS 851110 852567 . + 0 ID=cds-WP_003898576.1;Parent=gene-AL55_RS09645;Dbxref=GenBank:WP_003898576.1;Name=WP_003898576.1;gbkey=CDS;gene=phoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215272.1;locus_tag=AL55_RS09645;product=sensory box histidine kinase PhoR;protein_id=WP_003898576.1;transl_table=11 NZ_KK316828.1 RefSeq gene 852539 852940 . - . ID=gene-AL55_RS09650;Name=AL55_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09650;old_locus_tag=AL55_00794 NZ_KK316828.1 Protein Homology CDS 852539 852940 . - 0 ID=cds-WP_003403876.1;Parent=gene-AL55_RS09650;Dbxref=GenBank:WP_003403876.1;Name=WP_003403876.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403876.1;locus_tag=AL55_RS09650;product=HIT family protein;protein_id=WP_003403876.1;transl_table=11 NZ_KK316828.1 RefSeq gene 852980 853399 . - . ID=gene-AL55_RS09655;Name=AL55_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09655;old_locus_tag=AL55_00795 NZ_KK316828.1 Protein Homology CDS 852980 853399 . - 0 ID=cds-WP_003403880.1;Parent=gene-AL55_RS09655;Dbxref=GenBank:WP_003403880.1;Name=WP_003403880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215274.1;locus_tag=AL55_RS09655;product=ketosteroid isomerase family protein;protein_id=WP_003403880.1;transl_table=11 NZ_KK316828.1 RefSeq gene 853412 854539 . - . ID=gene-AL55_RS09660;Name=adhB;gbkey=Gene;gene=adhB;gene_biotype=protein_coding;locus_tag=AL55_RS09660;old_locus_tag=AL55_00796 NZ_KK316828.1 Protein Homology CDS 853412 854539 . - 0 ID=cds-WP_003403885.1;Parent=gene-AL55_RS09660;Dbxref=GenBank:WP_003403885.1;Name=WP_003403885.1;gbkey=CDS;gene=adhB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177754.1;locus_tag=AL55_RS09660;product=NDMA-dependent alcohol dehydrogenase;protein_id=WP_003403885.1;transl_table=11 NZ_KK316828.1 RefSeq gene 854638 855183 . - . ID=gene-AL55_RS09665;Name=AL55_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09665;old_locus_tag=AL55_00797 NZ_KK316828.1 Protein Homology CDS 854638 855183 . - 0 ID=cds-WP_003403887.1;Parent=gene-AL55_RS09665;Dbxref=GenBank:WP_003403887.1;Name=WP_003403887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215276.1;locus_tag=AL55_RS09665;product=Cif family virulence factor;protein_id=WP_003403887.1;transl_table=11 NZ_KK316828.1 RefSeq gene 855186 855392 . - . ID=gene-AL55_RS09670;Name=AL55_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09670;old_locus_tag=AL55_00798 NZ_KK316828.1 Protein Homology CDS 855186 855392 . - 0 ID=cds-WP_003403890.1;Parent=gene-AL55_RS09670;Dbxref=GenBank:WP_003403890.1;Name=WP_003403890.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215277.1;locus_tag=AL55_RS09670;product=ferredoxin;protein_id=WP_003403890.1;transl_table=11 NZ_KK316828.1 RefSeq gene 855395 856750 . - . ID=gene-AL55_RS09675;Name=cyp51;gbkey=Gene;gene=cyp51;gene_biotype=protein_coding;locus_tag=AL55_RS09675;old_locus_tag=AL55_00799 NZ_KK316828.1 Protein Homology CDS 855395 856750 . - 0 ID=cds-WP_003898577.1;Parent=gene-AL55_RS09675;Dbxref=GenBank:WP_003898577.1;Name=WP_003898577.1;gbkey=CDS;gene=cyp51;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215278.1;locus_tag=AL55_RS09675;product=lanosterol 14-alpha demethylase;protein_id=WP_003898577.1;transl_table=11 NZ_KK316828.1 RefSeq gene 856750 857577 . - . ID=gene-AL55_RS09680;Name=AL55_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09680;old_locus_tag=AL55_00800 NZ_KK316828.1 Protein Homology CDS 856750 857577 . - 0 ID=cds-WP_003898578.1;Parent=gene-AL55_RS09680;Dbxref=GenBank:WP_003898578.1;Name=WP_003898578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215279.1;locus_tag=AL55_RS09680;product=SDR family oxidoreductase;protein_id=WP_003898578.1;transl_table=11 NZ_KK316828.1 RefSeq gene 857577 858785 . - . ID=gene-AL55_RS09685;Name=AL55_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09685;old_locus_tag=AL55_00801 NZ_KK316828.1 Protein Homology CDS 857577 858785 . - 0 ID=cds-WP_003403911.1;Parent=gene-AL55_RS09685;Dbxref=GenBank:WP_003403911.1;Name=WP_003403911.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215280.1;locus_tag=AL55_RS09685;product=cytochrome P450;protein_id=WP_003403911.1;transl_table=11 NZ_KK316828.1 RefSeq gene 858782 859423 . - . ID=gene-AL55_RS09690;Name=AL55_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09690;old_locus_tag=AL55_00802 NZ_KK316828.1 Protein Homology CDS 858782 859423 . - 0 ID=cds-WP_003403915.1;Parent=gene-AL55_RS09690;Dbxref=GenBank:WP_003403915.1;Name=WP_003403915.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215281.1;locus_tag=AL55_RS09690;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403915.1;transl_table=11 NZ_KK316828.1 RefSeq gene 859625 861094 . + . ID=gene-AL55_RS09695;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=AL55_RS09695;old_locus_tag=AL55_00803 NZ_KK316828.1 Protein Homology CDS 859625 861094 . + 0 ID=cds-WP_003901913.1;Parent=gene-AL55_RS09695;Dbxref=GenBank:WP_003901913.1;Name=WP_003901913.1;Ontology_term=GO:0016903;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215282.1;locus_tag=AL55_RS09695;product=aldehyde dehydrogenase;protein_id=WP_003901913.1;transl_table=11 NZ_KK316828.1 RefSeq gene 861125 861871 . + . ID=gene-AL55_RS09700;Name=AL55_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09700;old_locus_tag=AL55_00804 NZ_KK316828.1 Protein Homology CDS 861125 861871 . + 0 ID=cds-WP_003898579.1;Parent=gene-AL55_RS09700;Dbxref=GenBank:WP_003898579.1;Name=WP_003898579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215283.1;locus_tag=AL55_RS09700;product=SDR family oxidoreductase;protein_id=WP_003898579.1;transl_table=11 NZ_KK316828.1 RefSeq gene 861969 862856 . + . ID=gene-AL55_RS09705;Name=AL55_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09705;old_locus_tag=AL55_00805 NZ_KK316828.1 Protein Homology CDS 861969 862856 . + 0 ID=cds-WP_003403924.1;Parent=gene-AL55_RS09705;Dbxref=GenBank:WP_003403924.1;Name=WP_003403924.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215284.1;locus_tag=AL55_RS09705;product=NAD(P)-dependent oxidoreductase;protein_id=WP_003403924.1;transl_table=11 NZ_KK316828.1 RefSeq gene 862853 863287 . + . ID=gene-AL55_RS09710;Name=AL55_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09710;old_locus_tag=AL55_00806 NZ_KK316828.1 Protein Homology CDS 862853 863287 . + 0 ID=cds-WP_003403928.1;Parent=gene-AL55_RS09710;Dbxref=GenBank:WP_003403928.1;Name=WP_003403928.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215285.1;locus_tag=AL55_RS09710;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003403928.1;transl_table=11 NZ_KK316828.1 RefSeq gene 863299 864567 . + . ID=gene-AL55_RS09715;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=AL55_RS09715;old_locus_tag=AL55_00807 NZ_KK316828.1 Protein Homology CDS 863299 864567 . + 0 ID=cds-WP_003898580.1;Parent=gene-AL55_RS09715;Dbxref=GenBank:WP_003898580.1;Name=WP_003898580.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215286.1;locus_tag=AL55_RS09715;product=phosphoribosylamine--glycine ligase;protein_id=WP_003898580.1;transl_table=11 NZ_KK316828.1 RefSeq gene 864564 866147 . - . ID=gene-AL55_RS09720;Name=ggtA;gbkey=Gene;gene=ggtA;gene_biotype=protein_coding;locus_tag=AL55_RS09720;old_locus_tag=AL55_00808 NZ_KK316828.1 Protein Homology CDS 864564 866147 . - 0 ID=cds-WP_003918129.1;Parent=gene-AL55_RS09720;Dbxref=GenBank:WP_003918129.1;Name=WP_003918129.1;gbkey=CDS;gene=ggtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918129.1;locus_tag=AL55_RS09720;product=gamma-glutamyltranspeptidase GgtA;protein_id=WP_003918129.1;transl_table=11 NZ_KK316828.1 RefSeq gene 866153 867064 . - . ID=gene-AL55_RS09725;Name=AL55_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09725;old_locus_tag=AL55_00809 NZ_KK316828.1 Protein Homology CDS 866153 867064 . - 0 ID=cds-WP_003403938.1;Parent=gene-AL55_RS09725;Dbxref=GenBank:WP_003403938.1;Name=WP_003403938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215288.2;locus_tag=AL55_RS09725;product=iron-stress inducible esterase;protein_id=WP_003403938.1;transl_table=11 NZ_KK316828.1 RefSeq gene 867120 867743 . + . ID=gene-AL55_RS09730;Name=AL55_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09730;old_locus_tag=AL55_00810 NZ_KK316828.1 Protein Homology CDS 867120 867743 . + 0 ID=cds-WP_009940497.1;Parent=gene-AL55_RS09730;Dbxref=GenBank:WP_009940497.1;Name=WP_009940497.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215289.1;locus_tag=AL55_RS09730;product=TetR/AcrR family transcriptional regulator;protein_id=WP_009940497.1;transl_table=11 NZ_KK316828.1 RefSeq gene 867697 868476 . - . ID=gene-AL55_RS09735;Name=AL55_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09735;old_locus_tag=AL55_00811 NZ_KK316828.1 Protein Homology CDS 867697 868476 . - 0 ID=cds-WP_003403949.1;Parent=gene-AL55_RS09735;Dbxref=GenBank:WP_003403949.1;Name=WP_003403949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215290.1;locus_tag=AL55_RS09735;product=DUF429 domain-containing protein;protein_id=WP_003403949.1;transl_table=11 NZ_KK316828.1 RefSeq gene 868721 870139 . + . ID=gene-AL55_RS09740;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AL55_RS09740;old_locus_tag=AL55_00812 NZ_KK316828.1 Protein Homology CDS 868721 870139 . + 0 ID=cds-WP_003898583.1;Parent=gene-AL55_RS09740;Dbxref=GenBank:WP_003898583.1;Name=WP_003898583.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215291.1;locus_tag=AL55_RS09740;product=adenylosuccinate lyase;protein_id=WP_003898583.1;transl_table=11 NZ_KK316828.1 RefSeq gene 870144 871388 . + . ID=gene-AL55_RS09745;Name=AL55_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09745;old_locus_tag=AL55_00813 NZ_KK316828.1 Protein Homology CDS 870144 871388 . + 0 ID=cds-WP_003898584.1;Parent=gene-AL55_RS09745;Dbxref=GenBank:WP_003898584.1;Name=WP_003898584.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215292.1;locus_tag=AL55_RS09745;product=cytochrome P450;protein_id=WP_003898584.1;transl_table=11 NZ_KK316828.1 RefSeq gene 871385 872005 . - . ID=gene-AL55_RS09750;Name=AL55_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09750;old_locus_tag=AL55_00814 NZ_KK316828.1 Protein Homology CDS 871385 872005 . - 0 ID=cds-WP_003403957.1;Parent=gene-AL55_RS09750;Dbxref=GenBank:WP_003403957.1;Name=WP_003403957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215293.1;locus_tag=AL55_RS09750;product=hypothetical protein;protein_id=WP_003403957.1;transl_table=11 NZ_KK316828.1 RefSeq gene 872056 872949 . + . ID=gene-AL55_RS09755;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=AL55_RS09755;old_locus_tag=AL55_00815 NZ_KK316828.1 Protein Homology CDS 872056 872949 . + 0 ID=cds-WP_003403962.1;Parent=gene-AL55_RS09755;Dbxref=GenBank:WP_003403962.1;Name=WP_003403962.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215294.1;locus_tag=AL55_RS09755;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_003403962.1;transl_table=11 NZ_KK316828.1 RefSeq gene 872946 875105 . + . ID=gene-AL55_RS09760;Name=AL55_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09760;old_locus_tag=AL55_00816 NZ_KK316828.1 Protein Homology CDS 872946 875105 . + 0 ID=cds-WP_003898586.1;Parent=gene-AL55_RS09760;Dbxref=GenBank:WP_003898586.1;Name=WP_003898586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915458.1;locus_tag=AL55_RS09760;product=S9 family peptidase;protein_id=WP_003898586.1;transl_table=11 NZ_KK316828.1 RefSeq gene 875404 875544 . + . ID=gene-AL55_RS0104360;Name=AL55_RS0104360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104360 NZ_KK316828.1 Protein Homology CDS 875404 875544 . + 0 ID=cds-WP_003403974.1;Parent=gene-AL55_RS0104360;Dbxref=GenBank:WP_003403974.1;Name=WP_003403974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403974.1;locus_tag=AL55_RS0104360;product=WHG domain-containing protein;protein_id=WP_003403974.1;transl_table=11 NZ_KK316828.1 RefSeq gene 875533 877155 . - . ID=gene-AL55_RS09765;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AL55_RS09765;old_locus_tag=AL55_00817 NZ_KK316828.1 Protein Homology CDS 875533 877155 . - 0 ID=cds-WP_003403977.1;Parent=gene-AL55_RS09765;Dbxref=GenBank:WP_003403977.1;Name=WP_003403977.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215297.1;locus_tag=AL55_RS09765;product=MFS transporter;protein_id=WP_003403977.1;transl_table=11 NZ_KK316828.1 RefSeq gene 877335 878039 . + . ID=gene-AL55_RS09770;Name=AL55_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09770;old_locus_tag=AL55_00818 NZ_KK316828.1 Protein Homology CDS 877335 878039 . + 0 ID=cds-WP_003403980.1;Parent=gene-AL55_RS09770;Dbxref=GenBank:WP_003403980.1;Name=WP_003403980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403980.1;locus_tag=AL55_RS09770;product=DUF2334 domain-containing protein;protein_id=WP_003403980.1;transl_table=11 NZ_KK316828.1 RefSeq gene 878055 879755 . + . ID=gene-AL55_RS09775;Name=AL55_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09775;old_locus_tag=AL55_00819 NZ_KK316828.1 Protein Homology CDS 878055 879755 . + 0 ID=cds-WP_003898590.1;Parent=gene-AL55_RS09775;Dbxref=GenBank:WP_003898590.1;Name=WP_003898590.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215299.1;locus_tag=AL55_RS09775;product=FAD-binding dehydrogenase;protein_id=WP_003898590.1;transl_table=11 NZ_KK316828.1 RefSeq gene 879790 880428 . - . ID=gene-AL55_RS09780;Name=AL55_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09780;old_locus_tag=AL55_00820 NZ_KK316828.1 Protein Homology CDS 879790 880428 . - 0 ID=cds-WP_003403989.1;Parent=gene-AL55_RS09780;Dbxref=GenBank:WP_003403989.1;Name=WP_003403989.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215300.2;locus_tag=AL55_RS09780;product=MBL fold metallo-hydrolase;protein_id=WP_003403989.1;transl_table=11 NZ_KK316828.1 RefSeq gene 880342 881133 . + . ID=gene-AL55_RS0104365;Name=AL55_RS0104365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104365;old_locus_tag=AL55_00821 NZ_KK316828.1 Protein Homology CDS 880342 881133 . + 0 ID=cds-WP_021036368.1;Parent=gene-AL55_RS0104365;Dbxref=GenBank:WP_021036368.1;Name=WP_021036368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584682.1;locus_tag=AL55_RS0104365;product=hypothetical protein;protein_id=WP_021036368.1;transl_table=11 NZ_KK316828.1 RefSeq gene 881239 881478 . + . ID=gene-AL55_RS09785;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=AL55_RS09785;old_locus_tag=AL55_00822 NZ_KK316828.1 Protein Homology CDS 881239 881478 . + 0 ID=cds-WP_003403993.1;Parent=gene-AL55_RS09785;Dbxref=GenBank:WP_003403993.1;Name=WP_003403993.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177755.1;locus_tag=AL55_RS09785;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_003403993.1;transl_table=11 NZ_KK316828.1 RefSeq gene 881475 882149 . + . ID=gene-AL55_RS09790;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=AL55_RS09790;old_locus_tag=AL55_00823 NZ_KK316828.1 Protein Homology CDS 881475 882149 . + 0 ID=cds-WP_003403995.1;Parent=gene-AL55_RS09790;Dbxref=GenBank:WP_003403995.1;Name=WP_003403995.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215303.1;locus_tag=AL55_RS09790;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_003403995.1;transl_table=11 NZ_KK316828.1 RefSeq gene 882166 882639 . - . ID=gene-AL55_RS0104370;Name=AL55_RS0104370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104370;old_locus_tag=AL55_00824 NZ_KK316828.1 Protein Homology CDS 882166 882639 . - 0 ID=cds-WP_014584683.1;Parent=gene-AL55_RS0104370;Dbxref=GenBank:WP_014584683.1;Name=WP_014584683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584683.1;locus_tag=AL55_RS0104370;product=hypothetical protein;protein_id=WP_014584683.1;transl_table=11 NZ_KK316828.1 RefSeq gene 882787 883515 . - . ID=gene-AL55_RS09795;Name=AL55_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09795;old_locus_tag=AL55_00825 NZ_KK316828.1 Protein Homology CDS 882787 883515 . - 0 ID=cds-WP_003404002.1;Parent=gene-AL55_RS09795;Dbxref=GenBank:WP_003404002.1;Name=WP_003404002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215305.1;locus_tag=AL55_RS09795;product=transglutaminase-like domain-containing protein;protein_id=WP_003404002.1;transl_table=11 NZ_KK316828.1 RefSeq gene 883512 884555 . - . ID=gene-AL55_RS09800;Name=AL55_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09800;old_locus_tag=AL55_00826 NZ_KK316828.1 Protein Homology CDS 883512 884555 . - 0 ID=cds-WP_003404004.1;Parent=gene-AL55_RS09800;Dbxref=GenBank:WP_003404004.1;Name=WP_003404004.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215306.1;locus_tag=AL55_RS09800;product=TIGR03619 family F420-dependent LLM class oxidoreductase;protein_id=WP_003404004.1;transl_table=11 NZ_KK316828.1 RefSeq gene 884552 885361 . - . ID=gene-AL55_RS09805;Name=AL55_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09805;old_locus_tag=AL55_00827 NZ_KK316828.1 Protein Homology CDS 884552 885361 . - 0 ID=cds-WP_003404007.1;Parent=gene-AL55_RS09805;Dbxref=GenBank:WP_003404007.1;Name=WP_003404007.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215307.1;locus_tag=AL55_RS09805;product=Rv0792c family HTH-type transcriptional regulator;protein_id=WP_003404007.1;transl_table=11 NZ_KK316828.1 RefSeq gene 885434 885739 . + . ID=gene-AL55_RS09810;Name=AL55_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09810;old_locus_tag=AL55_00828 NZ_KK316828.1 Protein Homology CDS 885434 885739 . + 0 ID=cds-WP_003404010.1;Parent=gene-AL55_RS09810;Dbxref=GenBank:WP_003404010.1;Name=WP_003404010.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215308.1;locus_tag=AL55_RS09810;product=putative quinol monooxygenase;protein_id=WP_003404010.1;transl_table=11 NZ_KK316828.1 RefSeq gene 885852 887351 . - . ID=gene-AL55_RS09815;Name=AL55_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09815;old_locus_tag=AL55_00829 NZ_KK316828.1 Protein Homology CDS 885852 887351 . - 0 ID=cds-WP_003404013.1;Parent=gene-AL55_RS09815;Dbxref=GenBank:WP_003404013.1;Name=WP_003404013.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177756.1;locus_tag=AL55_RS09815;product=dihydrolipoyl dehydrogenase family protein;protein_id=WP_003404013.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 887744 888817 . + . ID=gene-AL55_RS09820;Name=AL55_RS09820;end_range=888817,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS09820;old_locus_tag=AL55_00830;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 887744 888817 . + 0 ID=cds-AL55_RS09820;Parent=gene-AL55_RS09820;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=888817,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217844.1;locus_tag=AL55_RS09820;partial=true;product=IS110-like element IS1547 family transposase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 888828 889625 . - . ID=gene-AL55_RS09825;Name=AL55_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09825;old_locus_tag=AL55_00831 NZ_KK316828.1 Protein Homology CDS 888828 889625 . - 0 ID=cds-WP_003404092.1;Parent=gene-AL55_RS09825;Dbxref=GenBank:WP_003404092.1;Name=WP_003404092.1;Ontology_term=GO:0140737;gbkey=CDS;go_component=encapsulin nanocompartment|0140737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215313.1;locus_tag=AL55_RS09825;product=family 1 encapsulin nanocompartment shell protein;protein_id=WP_003404092.1;transl_table=11 NZ_KK316828.1 RefSeq gene 889622 890629 . - . ID=gene-AL55_RS09830;Name=AL55_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09830;old_locus_tag=AL55_00832 NZ_KK316828.1 Protein Homology CDS 889622 890629 . - 0 ID=cds-WP_003404098.1;Parent=gene-AL55_RS09830;Dbxref=GenBank:WP_003404098.1;Name=WP_003404098.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215314.1;locus_tag=AL55_RS09830;product=Dyp-type peroxidase;protein_id=WP_003404098.1;transl_table=11 NZ_KK316828.1 RefSeq gene 890674 891975 . + . ID=gene-AL55_RS09835;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=AL55_RS09835;old_locus_tag=AL55_00833 NZ_KK316828.1 Protein Homology CDS 890674 891975 . + 0 ID=cds-WP_003404103.1;Parent=gene-AL55_RS09835;Dbxref=GenBank:WP_003404103.1;Name=WP_003404103.1;Ontology_term=GO:0006508,GO:0004177,GO:0008270;gbkey=CDS;gene=pepC;go_function=aminopeptidase activity|0004177||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215315.1;locus_tag=AL55_RS09835;product=M18 family aminopeptidase;protein_id=WP_003404103.1;transl_table=11 NZ_KK316828.1 RefSeq gene 891987 892334 . + . ID=gene-AL55_RS09840;Name=AL55_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09840;old_locus_tag=AL55_00834 NZ_KK316828.1 Protein Homology CDS 891987 892334 . + 0 ID=cds-WP_003898592.1;Parent=gene-AL55_RS09840;Dbxref=GenBank:WP_003898592.1;Name=WP_003898592.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215316.1;locus_tag=AL55_RS09840;product=VOC family protein;protein_id=WP_003898592.1;transl_table=11 NZ_KK316828.1 RefSeq gene 892328 892984 . - . ID=gene-AL55_RS09845;Name=AL55_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09845;old_locus_tag=AL55_00835 NZ_KK316828.1 Protein Homology CDS 892328 892984 . - 0 ID=cds-WP_003404111.1;Parent=gene-AL55_RS09845;Dbxref=GenBank:WP_003404111.1;Name=WP_003404111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215317.1;locus_tag=AL55_RS09845;product=acetyl-/succinyl-CoA transferase;protein_id=WP_003404111.1;transl_table=11 NZ_KK316828.1 RefSeq gene 893176 895440 . + . ID=gene-AL55_RS09850;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=AL55_RS09850;old_locus_tag=AL55_00836 NZ_KK316828.1 Protein Homology CDS 893176 895440 . + 0 ID=cds-WP_003404114.1;Parent=gene-AL55_RS09850;Dbxref=GenBank:WP_003404114.1;Name=WP_003404114.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215318.1;locus_tag=AL55_RS09850;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_003404114.1;transl_table=11 NZ_KK316828.1 RefSeq gene 895437 896066 . + . ID=gene-AL55_RS09855;Name=AL55_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09855;old_locus_tag=AL55_00837 NZ_KK316828.1 Protein Homology CDS 895437 896066 . + 0 ID=cds-WP_003404117.1;Parent=gene-AL55_RS09855;Dbxref=GenBank:WP_003404117.1;Name=WP_003404117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215319.1;locus_tag=AL55_RS09855;product=Rv0804 family intramembrane glutamic endopeptidase;protein_id=WP_003404117.1;transl_table=11 NZ_KK316828.1 RefSeq gene 896187 897143 . + . ID=gene-AL55_RS09860;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=AL55_RS09860;old_locus_tag=AL55_00838 NZ_KK316828.1 Protein Homology CDS 896187 897143 . + 0 ID=cds-WP_003404120.1;Parent=gene-AL55_RS09860;Dbxref=GenBank:WP_003404120.1;Name=WP_003404120.1;gbkey=CDS;gene=cpdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215320.1;locus_tag=AL55_RS09860;product=3'%2C5'-cyclic adenosine monophosphate phosphodiesterase CpdA;protein_id=WP_003404120.1;transl_table=11 NZ_KK316828.1 RefSeq gene 897088 898686 . - . ID=gene-AL55_RS09865;Name=cpsY;gbkey=Gene;gene=cpsY;gene_biotype=protein_coding;locus_tag=AL55_RS09865;old_locus_tag=AL55_00839 NZ_KK316828.1 Protein Homology CDS 897088 898686 . - 0 ID=cds-WP_003898594.1;Parent=gene-AL55_RS09865;Dbxref=GenBank:WP_003898594.1;Name=WP_003898594.1;gbkey=CDS;gene=cpsY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215321.1;locus_tag=AL55_RS09865;product=stealth family protein;protein_id=WP_003898594.1;transl_table=11 NZ_KK316828.1 RefSeq gene 898991 899380 . + . ID=gene-AL55_RS09870;Name=AL55_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09870;old_locus_tag=AL55_00840 NZ_KK316828.1 Protein Homology CDS 898991 899380 . + 0 ID=cds-WP_003404127.1;Parent=gene-AL55_RS09870;Dbxref=GenBank:WP_003404127.1;Name=WP_003404127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215322.1;locus_tag=AL55_RS09870;product=sterol carrier family protein;protein_id=WP_003404127.1;transl_table=11 NZ_KK316828.1 RefSeq gene 899521 901050 . + . ID=gene-AL55_RS09875;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AL55_RS09875;old_locus_tag=AL55_00841 NZ_KK316828.1 Protein Homology CDS 899521 901050 . + 0 ID=cds-WP_031646911.1;Parent=gene-AL55_RS09875;Dbxref=GenBank:WP_031646911.1;Name=WP_031646911.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911290.1;locus_tag=AL55_RS09875;product=amidophosphoribosyltransferase;protein_id=WP_031646911.1;transl_table=11 NZ_KK316828.1 RefSeq gene 901081 902175 . + . ID=gene-AL55_RS09880;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AL55_RS09880;old_locus_tag=AL55_00842 NZ_KK316828.1 Protein Homology CDS 901081 902175 . + 0 ID=cds-WP_003404132.1;Parent=gene-AL55_RS09880;Dbxref=GenBank:WP_003404132.1;Name=WP_003404132.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215324.1;locus_tag=AL55_RS09880;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_003404132.1;transl_table=11 NZ_KK316828.1 RefSeq gene 902261 902443 . - . ID=gene-AL55_RS09885;Name=AL55_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09885;old_locus_tag=AL55_00843 NZ_KK316828.1 Protein Homology CDS 902261 902443 . - 0 ID=cds-WP_003404135.1;Parent=gene-AL55_RS09885;Dbxref=GenBank:WP_003404135.1;Name=WP_003404135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007777661.1;locus_tag=AL55_RS09885;product=DUF3073 domain-containing protein;protein_id=WP_003404135.1;transl_table=11 NZ_KK316828.1 RefSeq gene 902590 903696 . - . ID=gene-AL55_RS09890;Name=AL55_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09890;old_locus_tag=AL55_00844 NZ_KK316828.1 Protein Homology CDS 902590 903696 . - 0 ID=cds-WP_003404137.1;Parent=gene-AL55_RS09890;Dbxref=GenBank:WP_003404137.1;Name=WP_003404137.1;Ontology_term=GO:0016226,GO:0016740,GO:0005739;gbkey=CDS;go_component=mitochondrion|0005739||IEA;go_function=transferase activity|0016740||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215326.1;locus_tag=AL55_RS09890;product=CAF17-like 4Fe-4S cluster assembly/insertion protein YgfZ;protein_id=WP_003404137.1;transl_table=11 NZ_KK316828.1 RefSeq gene 903779 904648 . + . ID=gene-AL55_RS09895;Name=AL55_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09895;old_locus_tag=AL55_00845 NZ_KK316828.1 Protein Homology CDS 903779 904648 . + 0 ID=cds-WP_003404139.1;Parent=gene-AL55_RS09895;Dbxref=GenBank:WP_003404139.1;Name=WP_003404139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177757.1;locus_tag=AL55_RS09895;product=aminodeoxychorismate lyase;protein_id=WP_003404139.1;transl_table=11 NZ_KK316828.1 RefSeq gene 904694 905374 . - . ID=gene-AL55_RS09900;Name=AL55_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09900;old_locus_tag=AL55_00846 NZ_KK316828.1 Protein Homology CDS 904694 905374 . - 0 ID=cds-WP_003898596.1;Parent=gene-AL55_RS09900;Dbxref=GenBank:WP_003898596.1;Name=WP_003898596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215328.1;locus_tag=AL55_RS09900;product=nitrobindin family protein;protein_id=WP_003898596.1;transl_table=11 NZ_KK316828.1 RefSeq gene 905537 905839 . - . ID=gene-AL55_RS09905;Name=AL55_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09905;old_locus_tag=AL55_00847 NZ_KK316828.1 Protein Homology CDS 905537 905839 . - 0 ID=cds-WP_003905391.1;Parent=gene-AL55_RS09905;Dbxref=GenBank:WP_003905391.1;Name=WP_003905391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003877205.1;locus_tag=AL55_RS09905;product=DUF1416 domain-containing protein;protein_id=WP_003905391.1;transl_table=11 NZ_KK316828.1 RefSeq gene 905841 906674 . - . ID=gene-AL55_RS09910;Name=AL55_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09910;old_locus_tag=AL55_00848 NZ_KK316828.1 Protein Homology CDS 905841 906674 . - 0 ID=cds-WP_003404293.1;Parent=gene-AL55_RS09910;Dbxref=GenBank:WP_003404293.1;Name=WP_003404293.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215330.1;locus_tag=AL55_RS09910;product=sulfurtransferase;protein_id=WP_003404293.1;transl_table=11 NZ_KK316828.1 RefSeq gene 906848 906961 . - . ID=gene-AL55_RS27990;Name=AL55_RS27990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27990 NZ_KK316828.1 Protein Homology CDS 906848 906961 . - 0 ID=cds-WP_349814712.1;Parent=gene-AL55_RS27990;Dbxref=GenBank:WP_349814712.1;Name=WP_349814712.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042933.1;locus_tag=AL55_RS27990;product=Ms5788A family Cys-rich leader peptide;protein_id=WP_349814712.1;transl_table=11 NZ_KK316828.1 RefSeq gene 906967 907389 . - . ID=gene-AL55_RS09915;Name=thiX;gbkey=Gene;gene=thiX;gene_biotype=protein_coding;locus_tag=AL55_RS09915;old_locus_tag=AL55_00849 NZ_KK316828.1 Protein Homology CDS 906967 907389 . - 0 ID=cds-WP_003898598.1;Parent=gene-AL55_RS09915;Dbxref=GenBank:WP_003898598.1;Name=WP_003898598.1;Ontology_term=GO:0015035;gbkey=CDS;gene=thiX;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215331.1;locus_tag=AL55_RS09915;product=thioredoxin family protein;protein_id=WP_003898598.1;transl_table=11 NZ_KK316828.1 RefSeq gene 907386 908198 . - . ID=gene-AL55_RS09920;Name=lmeA;gbkey=Gene;gene=lmeA;gene_biotype=protein_coding;locus_tag=AL55_RS09920;old_locus_tag=AL55_00850 NZ_KK316828.1 Protein Homology CDS 907386 908198 . - 0 ID=cds-WP_003404298.1;Parent=gene-AL55_RS09920;Dbxref=GenBank:WP_003404298.1;Name=WP_003404298.1;gbkey=CDS;gene=lmeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215332.1;locus_tag=AL55_RS09920;product=mannan chain length control protein LmeA;protein_id=WP_003404298.1;transl_table=11 NZ_KK316828.1 RefSeq gene 908328 909095 . + . ID=gene-AL55_RS09925;Name=AL55_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09925;old_locus_tag=AL55_00851 NZ_KK316828.1 Protein Homology CDS 908328 909095 . + 0 ID=cds-WP_003898599.1;Parent=gene-AL55_RS09925;Dbxref=GenBank:WP_003898599.1;Name=WP_003898599.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215333.1;locus_tag=AL55_RS09925;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_003898599.1;transl_table=11 NZ_KK316828.1 RefSeq gene 909092 910039 . + . ID=gene-AL55_RS09930;Name=mshD;gbkey=Gene;gene=mshD;gene_biotype=protein_coding;locus_tag=AL55_RS09930;old_locus_tag=AL55_00852 NZ_KK316828.1 Protein Homology CDS 909092 910039 . + 0 ID=cds-WP_003404307.1;Parent=gene-AL55_RS09930;Dbxref=GenBank:WP_003404307.1;Name=WP_003404307.1;Ontology_term=GO:0010125,GO:0035447;gbkey=CDS;gene=mshD;go_function=mycothiol synthase activity|0035447||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215334.1;locus_tag=AL55_RS09930;product=mycothiol synthase;protein_id=WP_003404307.1;transl_table=11 NZ_KK316828.1 RefSeq gene 910082 910858 . + . ID=gene-AL55_RS09935;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AL55_RS09935;old_locus_tag=AL55_00853 NZ_KK316828.1 Protein Homology CDS 910082 910858 . + 0 ID=cds-WP_003404312.1;Parent=gene-AL55_RS09935;Dbxref=GenBank:WP_003404312.1;Name=WP_003404312.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215335.1;locus_tag=AL55_RS09935;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_003404312.1;transl_table=11 NZ_KK316828.1 RefSeq gene 910914 911555 . - . ID=gene-AL55_RS09940;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AL55_RS09940;old_locus_tag=AL55_00854 NZ_KK316828.1 Protein Homology CDS 910914 911555 . - 0 ID=cds-WP_003404314.1;Parent=gene-AL55_RS09940;Dbxref=GenBank:WP_003404314.1;Name=WP_003404314.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215336.1;locus_tag=AL55_RS09940;product=phosphate signaling complex protein PhoU;protein_id=WP_003404314.1;transl_table=11 NZ_KK316828.1 RefSeq gene 911613 913667 . - . ID=gene-AL55_RS09945;Name=AL55_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09945;old_locus_tag=AL55_00855 NZ_KK316828.1 Protein Homology CDS 911613 913667 . - 0 ID=cds-WP_003898600.1;Parent=gene-AL55_RS09945;Dbxref=GenBank:WP_003898600.1;Name=WP_003898600.1;Ontology_term=GO:0070726,GO:0071555,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=cell wall assembly|0070726||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215337.1;locus_tag=AL55_RS09945;product=LCP family protein;protein_id=WP_003898600.1;transl_table=11 NZ_KK316828.1 RefSeq gene 913833 914999 . - . ID=gene-AL55_RS09950;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=AL55_RS09950;old_locus_tag=AL55_00856 NZ_KK316828.1 Protein Homology CDS 913833 914999 . - 0 ID=cds-WP_003901917.1;Parent=gene-AL55_RS09950;Dbxref=GenBank:WP_003901917.1;Name=WP_003901917.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215338.1;locus_tag=AL55_RS09950;product=tRNA dihydrouridine synthase DusB;protein_id=WP_003901917.1;transl_table=11 NZ_KK316828.1 RefSeq gene 915087 916103 . - . ID=gene-AL55_RS09955;Name=desA1;gbkey=Gene;gene=desA1;gene_biotype=protein_coding;locus_tag=AL55_RS09955;old_locus_tag=AL55_00857 NZ_KK316828.1 Protein Homology CDS 915087 916103 . - 0 ID=cds-WP_003404321.1;Parent=gene-AL55_RS09955;Dbxref=GenBank:WP_003404321.1;Name=WP_003404321.1;gbkey=CDS;gene=desA1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177758.1;locus_tag=AL55_RS09955;product=acyl-ACP desaturase DesA1;protein_id=WP_003404321.1;transl_table=11 NZ_KK316828.1 RefSeq gene 916265 916906 . - . ID=gene-AL55_RS09960;Name=AL55_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09960;old_locus_tag=AL55_00858 NZ_KK316828.1 Protein Homology CDS 916265 916906 . - 0 ID=cds-WP_003901918.1;Parent=gene-AL55_RS09960;Dbxref=GenBank:WP_003901918.1;Name=WP_003901918.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215340.1;locus_tag=AL55_RS09960;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003901918.1;transl_table=11 NZ_KK316828.1 RefSeq gene 916987 918042 . + . ID=gene-AL55_RS09965;Name=AL55_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09965;old_locus_tag=AL55_00859 NZ_KK316828.1 Protein Homology CDS 916987 918042 . + 0 ID=cds-WP_003898602.1;Parent=gene-AL55_RS09965;Dbxref=GenBank:WP_003898602.1;Name=WP_003898602.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215341.1;locus_tag=AL55_RS09965;product=oxygenase MpaB family protein;protein_id=WP_003898602.1;transl_table=11 NZ_KK316828.1 RefSeq gene 918094 918486 . - . ID=gene-AL55_RS09970;Name=kmtR;gbkey=Gene;gene=kmtR;gene_biotype=protein_coding;locus_tag=AL55_RS09970;old_locus_tag=AL55_00860 NZ_KK316828.1 Protein Homology CDS 918094 918486 . - 0 ID=cds-WP_003404335.1;Parent=gene-AL55_RS09970;Dbxref=GenBank:WP_003404335.1;Name=WP_003404335.1;gbkey=CDS;gene=kmtR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215342.1;locus_tag=AL55_RS09970;product=Ni(II)/Co(II)-sensing metalloregulatory transcriptional repressor KmtR;protein_id=WP_003404335.1;transl_table=11 NZ_KK316828.1 RefSeq gene 918544 918891 . - . ID=gene-AL55_RS09975;Name=AL55_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09975;old_locus_tag=AL55_00861 NZ_KK316828.1 Protein Homology CDS 918544 918891 . - 0 ID=cds-WP_078377808.1;Parent=gene-AL55_RS09975;Dbxref=GenBank:WP_078377808.1;Name=WP_078377808.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012601.6;locus_tag=AL55_RS09975;product=tRNA-specific adenosine deaminase;protein_id=WP_078377808.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 918918 919218 . + . ID=gene-AL55_RS09980;Name=AL55_RS09980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS09980;old_locus_tag=AL55_00862;partial=true;pseudo=true;start_range=.,918918 NZ_KK316828.1 Protein Homology CDS 918918 919218 . + 0 ID=cds-AL55_RS09980;Parent=gene-AL55_RS09980;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288650.1;locus_tag=AL55_RS09980;partial=true;product=zinc ribbon domain-containing protein;pseudo=true;start_range=.,918918;transl_table=11 NZ_KK316828.1 RefSeq gene 919323 920228 . + . ID=gene-AL55_RS09985;Name=AL55_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09985;old_locus_tag=AL55_00863 NZ_KK316828.1 Protein Homology CDS 919323 920228 . + 0 ID=cds-WP_003404349.1;Parent=gene-AL55_RS09985;Dbxref=GenBank:WP_003404349.1;Name=WP_003404349.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215345.1;locus_tag=AL55_RS09985;product=SAM-dependent methyltransferase;protein_id=WP_003404349.1;transl_table=11 NZ_KK316828.1 RefSeq gene 920247 921062 . - . ID=gene-AL55_RS09990;Name=AL55_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS09990;old_locus_tag=AL55_00864 NZ_KK316828.1 Protein Homology CDS 920247 921062 . - 0 ID=cds-WP_003404352.1;Parent=gene-AL55_RS09990;Dbxref=GenBank:WP_003404352.1;Name=WP_003404352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215346.1;locus_tag=AL55_RS09990;product=TIGR04255 family protein;protein_id=WP_003404352.1;transl_table=11 NZ_KK316828.1 RefSeq gene 921156 921228 . - . ID=gene-AL55_RS09995;Name=AL55_RS09995;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS09995;old_locus_tag=AL55_00865 NZ_KK316828.1 tRNAscan-SE tRNA 921156 921228 . - . ID=rna-AL55_RS09995;Parent=gene-AL55_RS09995;anticodon=(pos:complement(921193..921195));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS09995;product=tRNA-Lys NZ_KK316828.1 tRNAscan-SE exon 921156 921228 . - . ID=exon-AL55_RS09995-1;Parent=rna-AL55_RS09995;anticodon=(pos:complement(921193..921195));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS09995;product=tRNA-Lys NZ_KK316828.1 RefSeq gene 921352 921425 . + . ID=gene-AL55_RS10000;Name=AL55_RS10000;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS10000;old_locus_tag=AL55_00866 NZ_KK316828.1 tRNAscan-SE tRNA 921352 921425 . + . ID=rna-AL55_RS10000;Parent=gene-AL55_RS10000;anticodon=(pos:921387..921389);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS10000;product=tRNA-Glu NZ_KK316828.1 tRNAscan-SE exon 921352 921425 . + . ID=exon-AL55_RS10000-1;Parent=rna-AL55_RS10000;anticodon=(pos:921387..921389);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS10000;product=tRNA-Glu NZ_KK316828.1 RefSeq gene 921463 921539 . + . ID=gene-AL55_RS10005;Name=AL55_RS10005;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS10005;old_locus_tag=AL55_00867 NZ_KK316828.1 tRNAscan-SE tRNA 921463 921539 . + . ID=rna-AL55_RS10005;Parent=gene-AL55_RS10005;anticodon=(pos:921497..921499);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS10005;product=tRNA-Asp NZ_KK316828.1 tRNAscan-SE exon 921463 921539 . + . ID=exon-AL55_RS10005-1;Parent=rna-AL55_RS10005;anticodon=(pos:921497..921499);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS10005;product=tRNA-Asp NZ_KK316828.1 RefSeq gene 921566 921642 . + . ID=gene-AL55_RS10010;Name=AL55_RS10010;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS10010;old_locus_tag=AL55_00868 NZ_KK316828.1 tRNAscan-SE tRNA 921566 921642 . + . ID=rna-AL55_RS10010;Parent=gene-AL55_RS10010;anticodon=(pos:921600..921602);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS10010;product=tRNA-Phe NZ_KK316828.1 tRNAscan-SE exon 921566 921642 . + . ID=exon-AL55_RS10010-1;Parent=rna-AL55_RS10010;anticodon=(pos:921600..921602);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS10010;product=tRNA-Phe NZ_KK316828.1 RefSeq gene 922304 922717 . + . ID=gene-AL55_RS10015;Name=AL55_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10015;old_locus_tag=AL55_00869 NZ_KK316828.1 Protein Homology CDS 922304 922717 . + 0 ID=cds-WP_003404353.1;Parent=gene-AL55_RS10015;Dbxref=GenBank:WP_003404353.1;Name=WP_003404353.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177759.1;locus_tag=AL55_RS10015;product=PE family protein;protein_id=WP_003404353.1;transl_table=11 NZ_KK316828.1 RefSeq gene 922714 923121 . + . ID=gene-AL55_RS10020;Name=AL55_RS10020;end_range=923121,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10020;old_locus_tag=AL55_00870;partial=true NZ_KK316828.1 Protein Homology CDS 922714 923121 . + 0 ID=cds-WP_031721877.1;Parent=gene-AL55_RS10020;Dbxref=GenBank:WP_031721877.1;Name=WP_031721877.1;end_range=923121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940505.1;locus_tag=AL55_RS10020;partial=true;product=hypothetical protein;protein_id=WP_031721877.1;transl_table=11 NZ_KK316828.1 RefSeq gene 924761 924940 . + . ID=gene-AL55_RS27995;Name=AL55_RS27995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27995 NZ_KK316828.1 Protein Homology CDS 924761 924940 . + 0 ID=cds-WP_003404355.1;Parent=gene-AL55_RS27995;Dbxref=GenBank:WP_003404355.1;Name=WP_003404355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404355.1;locus_tag=AL55_RS27995;product=hypothetical protein;protein_id=WP_003404355.1;transl_table=11 NZ_KK316828.1 RefSeq gene 924969 927617 . - . ID=gene-AL55_RS10025;Name=AL55_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10025;old_locus_tag=AL55_00871 NZ_KK316828.1 Protein Homology CDS 924969 927617 . - 0 ID=cds-WP_010886090.1;Parent=gene-AL55_RS10025;Dbxref=GenBank:WP_010886090.1;Name=WP_010886090.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177761.1;locus_tag=AL55_RS10025;product=PE family protein;protein_id=WP_010886090.1;transl_table=11 NZ_KK316828.1 RefSeq gene 928085 928729 . + . ID=gene-AL55_RS10030;Name=lpqQ;gbkey=Gene;gene=lpqQ;gene_biotype=protein_coding;locus_tag=AL55_RS10030;old_locus_tag=AL55_00872 NZ_KK316828.1 Protein Homology CDS 928085 928729 . + 0 ID=cds-WP_003404362.1;Parent=gene-AL55_RS10030;Dbxref=GenBank:WP_003404362.1;Name=WP_003404362.1;gbkey=CDS;gene=lpqQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215350.1;locus_tag=AL55_RS10030;product=sensor domain-containing protein;protein_id=WP_003404362.1;transl_table=11 NZ_KK316828.1 RefSeq gene 928710 929066 . - . ID=gene-AL55_RS27570;Name=AL55_RS27570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27570 NZ_KK316828.1 Protein Homology CDS 928710 929066 . - 0 ID=cds-WP_003911324.1;Parent=gene-AL55_RS27570;Dbxref=GenBank:WP_003911324.1;Name=WP_003911324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911324.1;locus_tag=AL55_RS27570;product=hypothetical protein;protein_id=WP_003911324.1;transl_table=11 NZ_KK316828.1 RefSeq gene 929342 930157 . - . ID=gene-AL55_RS10035;Name=AL55_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10035;old_locus_tag=AL55_00873 NZ_KK316828.1 Protein Homology CDS 929342 930157 . - 0 ID=cds-WP_003404365.1;Parent=gene-AL55_RS10035;Dbxref=GenBank:WP_003404365.1;Name=WP_003404365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015629722.1;locus_tag=AL55_RS10035;product=hypothetical protein;protein_id=WP_003404365.1;transl_table=11 NZ_KK316828.1 RefSeq gene 930135 931163 . - . ID=gene-AL55_RS10040;Name=AL55_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10040;old_locus_tag=AL55_00874 NZ_KK316828.1 Protein Homology CDS 930135 931163 . - 0 ID=cds-WP_003404368.1;Parent=gene-AL55_RS10040;Dbxref=GenBank:WP_003404368.1;Name=WP_003404368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215352.1;locus_tag=AL55_RS10040;product=type IV toxin-antitoxin system AbiEi family antitoxin;protein_id=WP_003404368.1;transl_table=11 NZ_KK316828.1 RefSeq gene 931852 932622 . + . ID=gene-AL55_RS10045;Name=lpqR;gbkey=Gene;gene=lpqR;gene_biotype=protein_coding;locus_tag=AL55_RS10045;old_locus_tag=AL55_00875 NZ_KK316828.1 Protein Homology CDS 931852 932622 . + 0 ID=cds-WP_003898609.1;Parent=gene-AL55_RS10045;Dbxref=GenBank:WP_003898609.1;Name=WP_003898609.1;gbkey=CDS;gene=lpqR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215353.1;locus_tag=AL55_RS10045;product=M15 family metallopeptidase;protein_id=WP_003898609.1;transl_table=11 NZ_KK316828.1 RefSeq gene 932709 933521 . + . ID=gene-AL55_RS10050;Name=AL55_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10050;old_locus_tag=AL55_00876 NZ_KK316828.1 Protein Homology CDS 932709 933521 . + 0 ID=cds-WP_003404373.1;Parent=gene-AL55_RS10050;Dbxref=GenBank:WP_003404373.1;Name=WP_003404373.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215354.1;locus_tag=AL55_RS10050;product=class I SAM-dependent methyltransferase;protein_id=WP_003404373.1;transl_table=11 NZ_KK316828.1 RefSeq gene 933589 934449 . - . ID=gene-AL55_RS10055;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=AL55_RS10055;old_locus_tag=AL55_00877 NZ_KK316828.1 Protein Homology CDS 933589 934449 . - 0 ID=cds-WP_003404376.1;Parent=gene-AL55_RS10055;Dbxref=GenBank:WP_003404376.1;Name=WP_003404376.1;gbkey=CDS;gene=pip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215355.1;locus_tag=AL55_RS10055;product=proline-specific peptidase family protein;protein_id=WP_003404376.1;transl_table=11 NZ_KK316828.1 RefSeq gene 935244 936536 . + . ID=gene-AL55_RS10065;Name=AL55_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10065;old_locus_tag=AL55_00879 NZ_KK316828.1 Protein Homology CDS 935244 936536 . + 0 ID=cds-WP_003404382.1;Parent=gene-AL55_RS10065;Dbxref=GenBank:WP_003404382.1;Name=WP_003404382.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215357.1;locus_tag=AL55_RS10065;product=MFS transporter;protein_id=WP_003404382.1;transl_table=11 NZ_KK316828.1 RefSeq gene 936520 937524 . + . ID=gene-AL55_RS10070;Name=AL55_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10070;old_locus_tag=AL55_00880 NZ_KK316828.1 Protein Homology CDS 936520 937524 . + 0 ID=cds-WP_003404384.1;Parent=gene-AL55_RS10070;Dbxref=GenBank:WP_003404384.1;Name=WP_003404384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215358.1;locus_tag=AL55_RS10070;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_003404384.1;transl_table=11 NZ_KK316828.1 RefSeq gene 937588 938238 . - . ID=gene-AL55_RS10075;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=AL55_RS10075;old_locus_tag=AL55_00881 NZ_KK316828.1 Protein Homology CDS 937588 938238 . - 0 ID=cds-WP_003901023.1;Parent=gene-AL55_RS10075;Dbxref=GenBank:WP_003901023.1;Name=WP_003901023.1;gbkey=CDS;gene=narL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215359.1;locus_tag=AL55_RS10075;product=two-component system response regulator NarL;protein_id=WP_003901023.1;transl_table=11 NZ_KK316828.1 RefSeq gene 938379 939599 . + . ID=gene-AL55_RS10080;Name=AL55_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10080;old_locus_tag=AL55_00882 NZ_KK316828.1 Protein Homology CDS 938379 939599 . + 0 ID=cds-WP_015287938.1;Parent=gene-AL55_RS10080;Dbxref=GenBank:WP_015287938.1;Name=WP_015287938.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287938.1;locus_tag=AL55_RS10080;product=sensor histidine kinase;protein_id=WP_015287938.1;transl_table=11 NZ_KK316828.1 RefSeq gene 939812 941326 . - . ID=gene-AL55_RS10085;Name=mmcO;gbkey=Gene;gene=mmcO;gene_biotype=protein_coding;locus_tag=AL55_RS10085;old_locus_tag=AL55_00883 NZ_KK316828.1 Protein Homology CDS 939812 941326 . - 0 ID=cds-WP_003404392.1;Parent=gene-AL55_RS10085;Dbxref=GenBank:WP_003404392.1;Name=WP_003404392.1;gbkey=CDS;gene=mmcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215361.1;locus_tag=AL55_RS10085;product=multicopper oxidase MmcO;protein_id=WP_003404392.1;transl_table=11 NZ_KK316828.1 RefSeq gene 941475 941867 . + . ID=gene-AL55_RS10090;Name=lpqs;gbkey=Gene;gene=lpqs;gene_biotype=protein_coding;locus_tag=AL55_RS10090;old_locus_tag=AL55_00884 NZ_KK316828.1 Protein Homology CDS 941475 941867 . + 0 ID=cds-WP_003901025.1;Parent=gene-AL55_RS10090;Dbxref=GenBank:WP_003901025.1;Name=WP_003901025.1;gbkey=CDS;gene=lpqs;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215362.1;locus_tag=AL55_RS10090;product=putative copper homeostasis (lipo)protein LpqS;protein_id=WP_003901025.1;transl_table=11 NZ_KK316828.1 RefSeq gene 942070 943188 . + . ID=gene-AL55_RS10095;Name=cysK2;gbkey=Gene;gene=cysK2;gene_biotype=protein_coding;locus_tag=AL55_RS10095;old_locus_tag=AL55_00885 NZ_KK316828.1 Protein Homology CDS 942070 943188 . + 0 ID=cds-WP_003404395.1;Parent=gene-AL55_RS10095;Dbxref=GenBank:WP_003404395.1;Name=WP_003404395.1;gbkey=CDS;gene=cysK2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177762.1;locus_tag=AL55_RS10095;product=S-sulfocysteine synthase CysK2;protein_id=WP_003404395.1;transl_table=11 NZ_KK316828.1 RefSeq gene 943188 944447 . + . ID=gene-AL55_RS10100;Name=AL55_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10100;old_locus_tag=AL55_00886 NZ_KK316828.1 Protein Homology CDS 943188 944447 . + 0 ID=cds-WP_003404402.1;Parent=gene-AL55_RS10100;Dbxref=GenBank:WP_003404402.1;Name=WP_003404402.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215364.1;locus_tag=AL55_RS10100;product=MDR family MFS transporter;protein_id=WP_003404402.1;transl_table=11 NZ_KK316828.1 RefSeq gene 944444 944776 . + . ID=gene-AL55_RS10105;Name=AL55_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10105;old_locus_tag=AL55_00887 NZ_KK316828.1 Protein Homology CDS 944444 944776 . + 0 ID=cds-WP_003404404.1;Parent=gene-AL55_RS10105;Dbxref=GenBank:WP_003404404.1;Name=WP_003404404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404404.1;locus_tag=AL55_RS10105;product=transposase;protein_id=WP_003404404.1;transl_table=11 NZ_KK316828.1 RefSeq gene 944773 945600 . - . ID=gene-AL55_RS10110;Name=AL55_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10110;old_locus_tag=AL55_00888 NZ_KK316828.1 Protein Homology CDS 944773 945600 . - 0 ID=cds-WP_003898616.1;Parent=gene-AL55_RS10110;Dbxref=GenBank:WP_003898616.1;Name=WP_003898616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215366.1;locus_tag=AL55_RS10110;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003898616.1;transl_table=11 NZ_KK316828.1 RefSeq gene 945889 946527 . + . ID=gene-AL55_RS0104390;Name=AL55_RS0104390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104390;old_locus_tag=AL55_00889 NZ_KK316828.1 Protein Homology CDS 945889 946527 . + 0 ID=cds-WP_003913008.1;Parent=gene-AL55_RS0104390;Dbxref=GenBank:WP_003913008.1;Name=WP_003913008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215367.2;locus_tag=AL55_RS0104390;product=hypothetical protein;protein_id=WP_003913008.1;transl_table=11 NZ_KK316828.1 RefSeq gene 946568 948250 . - . ID=gene-AL55_RS10115;Name=pdc;gbkey=Gene;gene=pdc;gene_biotype=protein_coding;locus_tag=AL55_RS10115;old_locus_tag=AL55_00890 NZ_KK316828.1 Protein Homology CDS 946568 948250 . - 0 ID=cds-WP_003900222.1;Parent=gene-AL55_RS10115;Dbxref=GenBank:WP_003900222.1;Name=WP_003900222.1;gbkey=CDS;gene=pdc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215368.1;locus_tag=AL55_RS10115;product=alpha-keto-acid decarboxylase;protein_id=WP_003900222.1;transl_table=11 NZ_KK316828.1 RefSeq gene 948315 948758 . + . ID=gene-AL55_RS10120;Name=AL55_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10120;old_locus_tag=AL55_00891 NZ_KK316828.1 Protein Homology CDS 948315 948758 . + 0 ID=cds-WP_003404412.1;Parent=gene-AL55_RS10120;Dbxref=GenBank:WP_003404412.1;Name=WP_003404412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215369.1;locus_tag=AL55_RS10120;product=SRPBCC family protein;protein_id=WP_003404412.1;transl_table=11 NZ_KK316828.1 RefSeq gene 948764 949843 . + . ID=gene-AL55_RS10125;Name=far;gbkey=Gene;gene=far;gene_biotype=protein_coding;locus_tag=AL55_RS10125;old_locus_tag=AL55_00892 NZ_KK316828.1 Protein Homology CDS 948764 949843 . + 0 ID=cds-WP_003905398.1;Parent=gene-AL55_RS10125;Dbxref=GenBank:WP_003905398.1;Name=WP_003905398.1;gbkey=CDS;gene=far;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215370.1;locus_tag=AL55_RS10125;product=fatty-acid-CoA racemase;protein_id=WP_003905398.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 949902 950361 . + . ID=gene-AL55_RS10130;Name=AL55_RS10130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS10130;old_locus_tag=AL55_00893;pseudo=true NZ_KK316828.1 Protein Homology CDS 949902 950361 . + 0 ID=cds-AL55_RS10130;Parent=gene-AL55_RS10130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351365.1;locus_tag=AL55_RS10130;product=SRPBCC family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 950410 950862 . + . ID=gene-AL55_RS10135;Name=AL55_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10135;old_locus_tag=AL55_00894 NZ_KK316828.1 Protein Homology CDS 950410 950862 . + 0 ID=cds-WP_003911328.1;Parent=gene-AL55_RS10135;Dbxref=GenBank:WP_003911328.1;Name=WP_003911328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287941.1;locus_tag=AL55_RS10135;product=SRPBCC family protein;protein_id=WP_003911328.1;transl_table=11 NZ_KK316828.1 RefSeq gene 950859 952052 . - . ID=gene-AL55_RS10140;Name=dapC;gbkey=Gene;gene=dapC;gene_biotype=protein_coding;locus_tag=AL55_RS10140;old_locus_tag=AL55_00895 NZ_KK316828.1 Protein Homology CDS 950859 952052 . - 0 ID=cds-WP_031695373.1;Parent=gene-AL55_RS10140;Dbxref=GenBank:WP_031695373.1;Name=WP_031695373.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=dapC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215373.1;locus_tag=AL55_RS10140;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_031695373.1;transl_table=11 NZ_KK316828.1 RefSeq gene 952209 953420 . + . ID=gene-AL55_RS10145;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AL55_RS10145;old_locus_tag=AL55_00896 NZ_KK316828.1 Protein Homology CDS 952209 953420 . + 0 ID=cds-WP_003404423.1;Parent=gene-AL55_RS10145;Dbxref=GenBank:WP_003404423.1;Name=WP_003404423.1;Ontology_term=GO:0016747;gbkey=CDS;gene=fadA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215374.1;locus_tag=AL55_RS10145;product=acetyl-CoA C-acetyltransferase;protein_id=WP_003404423.1;transl_table=11 NZ_KK316828.1 RefSeq gene 953425 955587 . + . ID=gene-AL55_RS10150;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=AL55_RS10150;old_locus_tag=AL55_00897 NZ_KK316828.1 Protein Homology CDS 953425 955587 . + 0 ID=cds-WP_003404426.1;Parent=gene-AL55_RS10150;Dbxref=GenBank:WP_003404426.1;Name=WP_003404426.1;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215375.1;locus_tag=AL55_RS10150;product=fatty oxidation protein FadB;protein_id=WP_003404426.1;transl_table=11 NZ_KK316828.1 RefSeq gene 955655 957304 . - . ID=gene-AL55_RS10155;Name=AL55_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10155;old_locus_tag=AL55_00898 NZ_KK316828.1 Protein Homology CDS 955655 957304 . - 0 ID=cds-WP_003913615.1;Parent=gene-AL55_RS10155;Dbxref=GenBank:WP_003913615.1;Name=WP_003913615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020729577.1;locus_tag=AL55_RS10155;product=DNA repair helicase XPB;protein_id=WP_003913615.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 957424 957518 . - . ID=gene-AL55_RS28170;Name=AL55_RS28170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28170;partial=true;pseudo=true;start_range=.,957424 NZ_KK316828.1 Protein Homology CDS 957424 957518 . - 0 ID=cds-AL55_RS28170;Parent=gene-AL55_RS28170;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=AL55_RS28170;partial=true;product=sirohydrochlorin chelatase;pseudo=true;start_range=.,957424;transl_table=11 NZ_KK316828.1 RefSeq gene 957527 959797 . - . ID=gene-AL55_RS10160;Name=AL55_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10160;old_locus_tag=AL55_00899 NZ_KK316828.1 Protein Homology CDS 957527 959797 . - 0 ID=cds-WP_003404512.1;Parent=gene-AL55_RS10160;Dbxref=GenBank:WP_003404512.1;Name=WP_003404512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215377.1;locus_tag=AL55_RS10160;product=helicase-associated domain-containing protein;protein_id=WP_003404512.1;transl_table=11 NZ_KK316828.1 RefSeq gene 959865 960065 . + . ID=gene-AL55_RS0104395;Name=AL55_RS0104395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104395;old_locus_tag=AL55_00900 NZ_KK316828.1 Protein Homology CDS 959865 960065 . + 0 ID=cds-WP_003911329.1;Parent=gene-AL55_RS0104395;Dbxref=GenBank:WP_003911329.1;Name=WP_003911329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215378.2;locus_tag=AL55_RS0104395;product=hypothetical protein;protein_id=WP_003911329.1;transl_table=11 NZ_KK316828.1 RefSeq gene 960075 960578 . + . ID=gene-AL55_RS10165;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AL55_RS10165;old_locus_tag=AL55_00901 NZ_KK316828.1 Protein Homology CDS 960075 960578 . + 0 ID=cds-WP_003404544.1;Parent=gene-AL55_RS10165;Dbxref=GenBank:WP_003404544.1;Name=WP_003404544.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215379.1;locus_tag=AL55_RS10165;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_003404544.1;transl_table=11 NZ_KK316828.1 RefSeq gene 960575 961057 . + . ID=gene-AL55_RS10170;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=AL55_RS10170;old_locus_tag=AL55_00902 NZ_KK316828.1 Protein Homology CDS 960575 961057 . + 0 ID=cds-WP_003404549.1;Parent=gene-AL55_RS10170;Dbxref=GenBank:WP_003404549.1;Name=WP_003404549.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;gene=mog;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215380.1;locus_tag=AL55_RS10170;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_003404549.1;transl_table=11 NZ_KK316828.1 RefSeq gene 961054 961479 . + . ID=gene-AL55_RS10175;Name=moaE2;gbkey=Gene;gene=moaE2;gene_biotype=protein_coding;locus_tag=AL55_RS10175;old_locus_tag=AL55_00903 NZ_KK316828.1 Protein Homology CDS 961054 961479 . + 0 ID=cds-WP_003404552.1;Parent=gene-AL55_RS10175;Dbxref=GenBank:WP_003404552.1;Name=WP_003404552.1;gbkey=CDS;gene=moaE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215381.1;locus_tag=AL55_RS10175;product=molybdopterin synthase subunit MoaE2;protein_id=WP_003404552.1;transl_table=11 NZ_KK316828.1 RefSeq gene 961497 962720 . - . ID=gene-AL55_RS10180;Name=rpfA;gbkey=Gene;gene=rpfA;gene_biotype=protein_coding;locus_tag=AL55_RS10180;old_locus_tag=AL55_00904 NZ_KK316828.1 Protein Homology CDS 961497 962720 . - 0 ID=cds-WP_003900223.1;Parent=gene-AL55_RS10180;Dbxref=GenBank:WP_003900223.1;Name=WP_003900223.1;gbkey=CDS;gene=rpfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215382.1;locus_tag=AL55_RS10180;product=resuscitation-promoting factor RpfA;protein_id=WP_003900223.1;transl_table=11 NZ_KK316828.1 cmsearch riboswitch 962730 962952 . - . ID=id-NZ_KK316828.1:962730..962952;Dbxref=RFAM:RF00379;Note=cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP;bound_moiety=cyclic di-AMP;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316828.1 RefSeq gene 963168 963446 . - . ID=gene-AL55_RS10185;Name=moaD2;gbkey=Gene;gene=moaD2;gene_biotype=protein_coding;locus_tag=AL55_RS10185;old_locus_tag=AL55_00905 NZ_KK316828.1 Protein Homology CDS 963168 963446 . - 0 ID=cds-WP_003404559.1;Parent=gene-AL55_RS10185;Dbxref=GenBank:WP_003404559.1;Name=WP_003404559.1;gbkey=CDS;gene=moaD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215383.1;locus_tag=AL55_RS10185;product=molybdopterin synthase subunit MoaD2;protein_id=WP_003404559.1;transl_table=11 NZ_KK316828.1 RefSeq gene 963450 964532 . - . ID=gene-AL55_RS10190;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AL55_RS10190;old_locus_tag=AL55_00906 NZ_KK316828.1 Protein Homology CDS 963450 964532 . - 0 ID=cds-WP_003404564.1;Parent=gene-AL55_RS10190;Dbxref=GenBank:WP_003404564.1;Name=WP_003404564.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215384.1;locus_tag=AL55_RS10190;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_003404564.1;transl_table=11 NZ_KK316828.1 RefSeq gene 964529 964918 . - . ID=gene-AL55_RS10195;Name=AL55_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10195;old_locus_tag=AL55_00907 NZ_KK316828.1 Protein Homology CDS 964529 964918 . - 0 ID=cds-WP_003404566.1;Parent=gene-AL55_RS10195;Dbxref=GenBank:WP_003404566.1;Name=WP_003404566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215385.1;locus_tag=AL55_RS10195;product=YccF domain-containing protein;protein_id=WP_003404566.1;transl_table=11 NZ_KK316828.1 RefSeq gene 965083 965490 . + . ID=gene-AL55_RS10200;Name=cspB;gbkey=Gene;gene=cspB;gene_biotype=protein_coding;locus_tag=AL55_RS10200;old_locus_tag=AL55_00908 NZ_KK316828.1 Protein Homology CDS 965083 965490 . + 0 ID=cds-WP_003404570.1;Parent=gene-AL55_RS10200;Dbxref=GenBank:WP_003404570.1;Name=WP_003404570.1;Ontology_term=GO:0003676;gbkey=CDS;gene=cspB;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215386.1;locus_tag=AL55_RS10200;product=cold-shock protein;protein_id=WP_003404570.1;transl_table=11 NZ_KK316828.1 RefSeq gene 965609 967438 . - . ID=gene-AL55_RS10205;Name=AL55_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10205;old_locus_tag=AL55_00909 NZ_KK316828.1 Protein Homology CDS 965609 967438 . - 0 ID=cds-WP_009938284.1;Parent=gene-AL55_RS10205;Dbxref=GenBank:WP_009938284.1;Name=WP_009938284.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938284.1;locus_tag=AL55_RS10205;product=PE family protein;protein_id=WP_009938284.1;transl_table=11 NZ_KK316828.1 RefSeq gene 967699 969651 . + . ID=gene-AL55_RS10210;Name=AL55_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10210;old_locus_tag=AL55_00910 NZ_KK316828.1 Protein Homology CDS 967699 969651 . + 0 ID=cds-WP_003898626.1;Parent=gene-AL55_RS10210;Dbxref=GenBank:WP_003898626.1;Name=WP_003898626.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215388.1;locus_tag=AL55_RS10210;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003898626.1;transl_table=11 NZ_KK316828.1 RefSeq gene 969740 970900 . - . ID=gene-AL55_RS10215;Name=AL55_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10215;old_locus_tag=AL55_00911 NZ_KK316828.1 Protein Homology CDS 969740 970900 . - 0 ID=cds-WP_003901031.1;Parent=gene-AL55_RS10215;Dbxref=GenBank:WP_003901031.1;Name=WP_003901031.1;Ontology_term=GO:0007165;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215389.1;locus_tag=AL55_RS10215;product=FIST signal transduction protein;protein_id=WP_003901031.1;transl_table=11 NZ_KK316828.1 RefSeq gene 971000 971488 . - . ID=gene-AL55_RS10220;Name=AL55_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10220;old_locus_tag=AL55_00912 NZ_KK316828.1 Protein Homology CDS 971000 971488 . - 0 ID=cds-WP_003404591.1;Parent=gene-AL55_RS10220;Dbxref=GenBank:WP_003404591.1;Name=WP_003404591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215390.1;locus_tag=AL55_RS10220;product=DUF2771 domain-containing protein;protein_id=WP_003404591.1;transl_table=11 NZ_KK316828.1 RefSeq gene 971485 973131 . - . ID=gene-AL55_RS10225;Name=AL55_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10225;old_locus_tag=AL55_00913 NZ_KK316828.1 Protein Homology CDS 971485 973131 . - 0 ID=cds-WP_003900225.1;Parent=gene-AL55_RS10225;Dbxref=GenBank:WP_003900225.1;Name=WP_003900225.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215391.1;locus_tag=AL55_RS10225;product=MFS transporter;protein_id=WP_003900225.1;transl_table=11 NZ_KK316828.1 RefSeq gene 973269 974057 . + . ID=gene-AL55_RS10230;Name=AL55_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10230;old_locus_tag=AL55_00914 NZ_KK316828.1 Protein Homology CDS 973269 974057 . + 0 ID=cds-WP_003404596.1;Parent=gene-AL55_RS10230;Dbxref=GenBank:WP_003404596.1;Name=WP_003404596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215392.1;locus_tag=AL55_RS10230;product=DUF3027 domain-containing protein;protein_id=WP_003404596.1;transl_table=11 NZ_KK316828.1 RefSeq gene 974066 975400 . - . ID=gene-AL55_RS10235;Name=AL55_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10235;old_locus_tag=AL55_00915 NZ_KK316828.1 Protein Homology CDS 974066 975400 . - 0 ID=cds-WP_023643435.1;Parent=gene-AL55_RS10235;Dbxref=GenBank:WP_023643435.1;Name=WP_023643435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177764.1;locus_tag=AL55_RS10235;product=PPE family protein;protein_id=WP_023643435.1;transl_table=11 NZ_KK316828.1 RefSeq gene 975678 975953 . - . ID=gene-AL55_RS10240;Name=AL55_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10240;old_locus_tag=AL55_00916 NZ_KK316828.1 Protein Homology CDS 975678 975953 . - 0 ID=cds-WP_003404603.1;Parent=gene-AL55_RS10240;Dbxref=GenBank:WP_003404603.1;Name=WP_003404603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215394.1;locus_tag=AL55_RS10240;product=DUF2530 domain-containing protein;protein_id=WP_003404603.1;transl_table=11 NZ_KK316828.1 RefSeq gene 976131 976562 . + . ID=gene-AL55_RS10245;Name=AL55_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10245;old_locus_tag=AL55_00917 NZ_KK316828.1 Protein Homology CDS 976131 976562 . + 0 ID=cds-WP_003404606.1;Parent=gene-AL55_RS10245;Dbxref=GenBank:WP_003404606.1;Name=WP_003404606.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215395.1;locus_tag=AL55_RS10245;product=Rv0880 family HTH-type transcriptional regulator;protein_id=WP_003404606.1;transl_table=11 NZ_KK316828.1 RefSeq gene 976559 977425 . + . ID=gene-AL55_RS10250;Name=AL55_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10250;old_locus_tag=AL55_00918 NZ_KK316828.1 Protein Homology CDS 976559 977425 . + 0 ID=cds-WP_003404610.1;Parent=gene-AL55_RS10250;Dbxref=GenBank:WP_003404610.1;Name=WP_003404610.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215396.1;locus_tag=AL55_RS10250;product=TrmH family RNA methyltransferase;protein_id=WP_003404610.1;transl_table=11 NZ_KK316828.1 RefSeq gene 977422 977706 . + . ID=gene-AL55_RS10255;Name=AL55_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10255;old_locus_tag=AL55_00919 NZ_KK316828.1 Protein Homology CDS 977422 977706 . + 0 ID=cds-WP_003404614.1;Parent=gene-AL55_RS10255;Dbxref=GenBank:WP_003404614.1;Name=WP_003404614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215397.1;locus_tag=AL55_RS10255;product=DUF2537 domain-containing protein;protein_id=WP_003404614.1;transl_table=11 NZ_KK316828.1 RefSeq gene 977703 978464 . - . ID=gene-AL55_RS10260;Name=sepH;gbkey=Gene;gene=sepH;gene_biotype=protein_coding;locus_tag=AL55_RS10260;old_locus_tag=AL55_00920 NZ_KK316828.1 Protein Homology CDS 977703 978464 . - 0 ID=cds-WP_003404617.1;Parent=gene-AL55_RS10260;Dbxref=GenBank:WP_003404617.1;Name=WP_003404617.1;Ontology_term=GO:0051301;gbkey=CDS;gene=sepH;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215398.1;locus_tag=AL55_RS10260;product=septation protein SepH;protein_id=WP_003404617.1;transl_table=11 NZ_KK316828.1 RefSeq gene 978621 979751 . - . ID=gene-AL55_RS10265;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AL55_RS10265;old_locus_tag=AL55_00921 NZ_KK316828.1 Protein Homology CDS 978621 979751 . - 0 ID=cds-WP_003404623.1;Parent=gene-AL55_RS10265;Dbxref=GenBank:WP_003404623.1;Name=WP_003404623.1;Ontology_term=GO:0006564,GO:0009058,GO:0004648;gbkey=CDS;gene=serC;go_function=O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215399.1;locus_tag=AL55_RS10265;product=phosphoserine transaminase;protein_id=WP_003404623.1;transl_table=11 NZ_KK316828.1 RefSeq gene 979959 980981 . + . ID=gene-AL55_RS10270;Name=AL55_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10270;old_locus_tag=AL55_00922 NZ_KK316828.1 Protein Homology CDS 979959 980981 . + 0 ID=cds-WP_003404627.1;Parent=gene-AL55_RS10270;Dbxref=GenBank:WP_003404627.1;Name=WP_003404627.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215400.1;locus_tag=AL55_RS10270;product=AurF N-oxygenase family protein;protein_id=WP_003404627.1;transl_table=11 NZ_KK316828.1 RefSeq gene 981000 982727 . + . ID=gene-AL55_RS10275;Name=fprB;gbkey=Gene;gene=fprB;gene_biotype=protein_coding;locus_tag=AL55_RS10275;old_locus_tag=AL55_00923 NZ_KK316828.1 Protein Homology CDS 981000 982727 . + 0 ID=cds-WP_003404631.1;Parent=gene-AL55_RS10275;Dbxref=GenBank:WP_003404631.1;Name=WP_003404631.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fprB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215401.1;locus_tag=AL55_RS10275;product=FAD-dependent oxidoreductase;protein_id=WP_003404631.1;transl_table=11 NZ_KK316828.1 RefSeq gene 982710 983168 . - . ID=gene-AL55_RS10280;Name=AL55_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10280;old_locus_tag=AL55_00924 NZ_KK316828.1 Protein Homology CDS 982710 983168 . - 0 ID=cds-WP_003404633.1;Parent=gene-AL55_RS10280;Dbxref=GenBank:WP_003404633.1;Name=WP_003404633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215402.1;locus_tag=AL55_RS10280;product=VOC family protein;protein_id=WP_003404633.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 984430 985903 . + . ID=gene-AL55_RS0104405;Name=spmT;gbkey=Gene;gene=spmT;gene_biotype=pseudogene;locus_tag=AL55_RS0104405;old_locus_tag=AL55_00925;pseudo=true NZ_KK316828.1 Protein Homology CDS 984430 985903 . + 0 ID=cds-AL55_RS0104405;Parent=gene-AL55_RS0104405;Note=frameshifted;gbkey=CDS;gene=spmT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215403.1;locus_tag=AL55_RS0104405;product=sphingomyelinase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 985938 987059 . - . ID=gene-AL55_RS10285;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=AL55_RS10285;old_locus_tag=AL55_00926 NZ_KK316828.1 Protein Homology CDS 985938 987059 . - 0 ID=cds-WP_003898633.1;Parent=gene-AL55_RS10285;Dbxref=GenBank:WP_003898633.1;Name=WP_003898633.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215404.1;locus_tag=AL55_RS10285;product=citrate synthase 2;protein_id=WP_003898633.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 987146 990410 . - . ID=gene-AL55_RS10290;Name=AL55_RS10290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS10290;old_locus_tag=AL55_00927;pseudo=true NZ_KK316828.1 Protein Homology CDS 987146 990410 . - 0 ID=cds-AL55_RS10290;Parent=gene-AL55_RS10290;Note=frameshifted;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292513.1;locus_tag=AL55_RS10290;product=LuxR C-terminal-related transcriptional regulator;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 991051 992538 . + . ID=gene-AL55_RS10300;Name=AL55_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10300;old_locus_tag=AL55_00929 NZ_KK316828.1 Protein Homology CDS 991051 992538 . + 0 ID=cds-WP_003404651.1;Parent=gene-AL55_RS10300;Dbxref=GenBank:WP_003404651.1;Name=WP_003404651.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215407.1;locus_tag=AL55_RS10300;product=flavin-containing monooxygenase;protein_id=WP_003404651.1;transl_table=11 NZ_KK316828.1 RefSeq gene 992516 993493 . - . ID=gene-AL55_RS10305;Name=AL55_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10305;old_locus_tag=AL55_00930 NZ_KK316828.1 Protein Homology CDS 992516 993493 . - 0 ID=cds-WP_003901941.1;Parent=gene-AL55_RS10305;Dbxref=GenBank:WP_003901941.1;Name=WP_003901941.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215408.1;locus_tag=AL55_RS10305;product=class I SAM-dependent methyltransferase;protein_id=WP_003901941.1;transl_table=11 NZ_KK316828.1 RefSeq gene 993722 994903 . + . ID=gene-AL55_RS10310;Name=AL55_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10310;old_locus_tag=AL55_00931 NZ_KK316828.1 Protein Homology CDS 993722 994903 . + 0 ID=cds-WP_003404660.1;Parent=gene-AL55_RS10310;Dbxref=GenBank:WP_003404660.1;Name=WP_003404660.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215409.1;locus_tag=AL55_RS10310;product=ATP-binding protein;protein_id=WP_003404660.1;transl_table=11 NZ_KK316828.1 RefSeq gene 995061 996497 . + . ID=gene-AL55_RS10315;Name=AL55_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10315;old_locus_tag=AL55_00932 NZ_KK316828.1 Protein Homology CDS 995061 996497 . + 0 ID=cds-WP_003898635.1;Parent=gene-AL55_RS10315;Dbxref=GenBank:WP_003898635.1;Name=WP_003898635.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898635.1;locus_tag=AL55_RS10315;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003898635.1;transl_table=11 NZ_KK316828.1 RefSeq gene 996670 997965 . + . ID=gene-AL55_RS10320;Name=AL55_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10320;old_locus_tag=AL55_00933 NZ_KK316828.1 Protein Homology CDS 996670 997965 . + 0 ID=cds-WP_003901040.1;Parent=gene-AL55_RS10320;Dbxref=GenBank:WP_003901040.1;Name=WP_003901040.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215411.1;locus_tag=AL55_RS10320;product=citrate synthase;protein_id=WP_003901040.1;transl_table=11 NZ_KK316828.1 RefSeq gene 998006 999613 . - . ID=gene-AL55_RS10325;Name=AL55_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10325;old_locus_tag=AL55_00934 NZ_KK316828.1 Protein Homology CDS 998006 999613 . - 0 ID=cds-WP_003900230.1;Parent=gene-AL55_RS10325;Dbxref=GenBank:WP_003900230.1;Name=WP_003900230.1;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215412.1;locus_tag=AL55_RS10325;product=phytoene desaturase family protein;protein_id=WP_003900230.1;transl_table=11 NZ_KK316828.1 RefSeq gene 999639 999902 . - . ID=gene-AL55_RS10330;Name=AL55_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10330;old_locus_tag=AL55_00935 NZ_KK316828.1 Protein Homology CDS 999639 999902 . - 0 ID=cds-WP_003404673.1;Parent=gene-AL55_RS10330;Dbxref=GenBank:WP_003404673.1;Name=WP_003404673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215413.1;locus_tag=AL55_RS10330;product=DUF2630 family protein;protein_id=WP_003404673.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1000010 1000990 . + . ID=gene-AL55_RS10335;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=protein_coding;gene_synonym=ompATb;locus_tag=AL55_RS10335;old_locus_tag=AL55_00936 NZ_KK316828.1 Protein Homology CDS 1000010 1000990 . + 0 ID=cds-WP_003404684.1;Parent=gene-AL55_RS10335;Dbxref=GenBank:WP_003404684.1;Name=WP_003404684.1;gbkey=CDS;gene=arfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215414.1;locus_tag=AL55_RS10335;product=channel-forming protein ArfA/OmpATb;protein_id=WP_003404684.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1001003 1001155 . + . ID=gene-AL55_RS10340;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=AL55_RS10340;old_locus_tag=AL55_00937 NZ_KK316828.1 Protein Homology CDS 1001003 1001155 . + 0 ID=cds-WP_003404687.1;Parent=gene-AL55_RS10340;Dbxref=GenBank:WP_003404687.1;Name=WP_003404687.1;gbkey=CDS;gene=arfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215415.1;locus_tag=AL55_RS10340;product=channel accessory protein ArfB;protein_id=WP_003404687.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1001155 1001682 . + . ID=gene-AL55_RS10345;Name=arfC;gbkey=Gene;gene=arfC;gene_biotype=protein_coding;locus_tag=AL55_RS10345;old_locus_tag=AL55_00938 NZ_KK316828.1 Protein Homology CDS 1001155 1001682 . + 0 ID=cds-WP_003404688.1;Parent=gene-AL55_RS10345;Dbxref=GenBank:WP_003404688.1;Name=WP_003404688.1;gbkey=CDS;gene=arfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215416.1;locus_tag=AL55_RS10345;product=channel accessory protein ArfC%2C sunset domain variant;protein_id=WP_003404688.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1001699 1003039 . - . ID=gene-AL55_RS10350;Name=prrB;gbkey=Gene;gene=prrB;gene_biotype=protein_coding;locus_tag=AL55_RS10350;old_locus_tag=AL55_00939 NZ_KK316828.1 Protein Homology CDS 1001699 1003039 . - 0 ID=cds-WP_003404689.1;Parent=gene-AL55_RS10350;Dbxref=GenBank:WP_003404689.1;Name=WP_003404689.1;gbkey=CDS;gene=prrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215417.1;locus_tag=AL55_RS10350;product=two-component system sensor histidine kinase PrrB;protein_id=WP_003404689.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1003050 1003760 . - . ID=gene-AL55_RS10355;Name=prrA;gbkey=Gene;gene=prrA;gene_biotype=protein_coding;locus_tag=AL55_RS10355;old_locus_tag=AL55_00940 NZ_KK316828.1 Protein Homology CDS 1003050 1003760 . - 0 ID=cds-WP_003404690.1;Parent=gene-AL55_RS10355;Dbxref=GenBank:WP_003404690.1;Name=WP_003404690.1;gbkey=CDS;gene=prrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215418.1;locus_tag=AL55_RS10355;product=two-component system response regulator PrrA;protein_id=WP_003404690.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1003891 1005378 . - . ID=gene-AL55_RS10360;Name=AL55_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10360;old_locus_tag=AL55_00941 NZ_KK316828.1 Protein Homology CDS 1003891 1005378 . - 0 ID=cds-WP_003404691.1;Parent=gene-AL55_RS10360;Dbxref=GenBank:WP_003404691.1;Name=WP_003404691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215419.1;locus_tag=AL55_RS10360;product=carboxyl transferase domain-containing protein;protein_id=WP_003404691.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1005405 1006136 . + . ID=gene-AL55_RS10365;Name=AL55_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10365;old_locus_tag=AL55_00942 NZ_KK316828.1 Protein Homology CDS 1005405 1006136 . + 0 ID=cds-WP_003404702.1;Parent=gene-AL55_RS10365;Dbxref=GenBank:WP_003404702.1;Name=WP_003404702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215420.1;locus_tag=AL55_RS10365;product=enoyl-CoA hydratase;protein_id=WP_003404702.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1006142 1007260 . + . ID=gene-AL55_RS10370;Name=AL55_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10370;old_locus_tag=AL55_00943 NZ_KK316828.1 Protein Homology CDS 1006142 1007260 . + 0 ID=cds-WP_003404705.1;Parent=gene-AL55_RS10370;Dbxref=GenBank:WP_003404705.1;Name=WP_003404705.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215421.1;locus_tag=AL55_RS10370;product=MBL fold metallo-hydrolase;protein_id=WP_003404705.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1007353 1008933 . + . ID=gene-AL55_RS10375;Name=AL55_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10375;old_locus_tag=AL55_00944 NZ_KK316828.1 Protein Homology CDS 1007353 1008933 . + 0 ID=cds-WP_003910977.1;Parent=gene-AL55_RS10375;Dbxref=GenBank:WP_003910977.1;Name=WP_003910977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009975161.1;locus_tag=AL55_RS10375;product=serine hydrolase;protein_id=WP_003910977.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1008930 1011323 . + . ID=gene-AL55_RS10380;Name=ctpE;gbkey=Gene;gene=ctpE;gene_biotype=protein_coding;locus_tag=AL55_RS10380;old_locus_tag=AL55_00945 NZ_KK316828.1 Protein Homology CDS 1008930 1011323 . + 0 ID=cds-WP_003898639.1;Parent=gene-AL55_RS10380;Dbxref=GenBank:WP_003898639.1;Name=WP_003898639.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=ctpE;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215423.1;locus_tag=AL55_RS10380;product=cation-translocating P-type ATPase;protein_id=WP_003898639.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1011596 1011754 . + . ID=gene-AL55_RS27215;Name=AL55_RS27215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27215 NZ_KK316828.1 Protein Homology CDS 1011596 1011754 . + 0 ID=cds-WP_003404720.1;Parent=gene-AL55_RS27215;Dbxref=GenBank:WP_003404720.1;Name=WP_003404720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404720.1;locus_tag=AL55_RS27215;product=hypothetical protein;protein_id=WP_003404720.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1011880 1012059 . + . ID=gene-AL55_RS10385;Name=AL55_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10385;old_locus_tag=AL55_00946 NZ_KK316828.1 Protein Homology CDS 1011880 1012059 . + 0 ID=cds-WP_003898641.1;Parent=gene-AL55_RS10385;Dbxref=GenBank:WP_003898641.1;Name=WP_003898641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215424.1;locus_tag=AL55_RS10385;product=antitoxin;protein_id=WP_003898641.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1012065 1012499 . + . ID=gene-AL55_RS10390;Name=AL55_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10390;old_locus_tag=AL55_00947 NZ_KK316828.1 Protein Homology CDS 1012065 1012499 . + 0 ID=cds-WP_003404726.1;Parent=gene-AL55_RS10390;Dbxref=GenBank:WP_003404726.1;Name=WP_003404726.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215425.1;locus_tag=AL55_RS10390;product=type II toxin-antitoxin system Rv0910 family toxin;protein_id=WP_003404726.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1012597 1013370 . + . ID=gene-AL55_RS10395;Name=AL55_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10395;old_locus_tag=AL55_00948 NZ_KK316828.1 Protein Homology CDS 1012597 1013370 . + 0 ID=cds-WP_003404735.1;Parent=gene-AL55_RS10395;Dbxref=GenBank:WP_003404735.1;Name=WP_003404735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215426.1;locus_tag=AL55_RS10395;product=VOC family protein;protein_id=WP_003404735.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1013435 1013884 . + . ID=gene-AL55_RS10400;Name=AL55_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10400;old_locus_tag=AL55_00949 NZ_KK316828.1 Protein Homology CDS 1013435 1013884 . + 0 ID=cds-WP_003404738.1;Parent=gene-AL55_RS10400;Dbxref=GenBank:WP_003404738.1;Name=WP_003404738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215427.1;locus_tag=AL55_RS10400;product=hypothetical protein;protein_id=WP_003404738.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1014019 1014249 . - . ID=gene-AL55_RS0104420;Name=AL55_RS0104420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104420 NZ_KK316828.1 Protein Homology CDS 1014019 1014249 . - 0 ID=cds-WP_003898642.1;Parent=gene-AL55_RS0104420;Dbxref=GenBank:WP_003898642.1;Name=WP_003898642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404739.1;locus_tag=AL55_RS0104420;product=hypothetical protein;protein_id=WP_003898642.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1014416 1015924 . - . ID=gene-AL55_RS10405;Name=AL55_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10405;old_locus_tag=AL55_00950 NZ_KK316828.1 Protein Homology CDS 1014416 1015924 . - 0 ID=cds-WP_003404742.1;Parent=gene-AL55_RS10405;Dbxref=GenBank:WP_003404742.1;Name=WP_003404742.1;Ontology_term=GO:0006720,GO:0016702,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of two atoms of oxygen|0016702||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid metabolic process|0006720||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215428.1;locus_tag=AL55_RS10405;product=carotenoid oxygenase family protein;protein_id=WP_003404742.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1015926 1017164 . - . ID=gene-AL55_RS10410;Name=AL55_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10410;old_locus_tag=AL55_00951 NZ_KK316828.1 Protein Homology CDS 1015926 1017164 . - 0 ID=cds-WP_003404744.1;Parent=gene-AL55_RS10410;Dbxref=GenBank:WP_003404744.1;Name=WP_003404744.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215429.1;locus_tag=AL55_RS10410;product=acetyl-CoA acetyltransferase;protein_id=WP_003404744.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1017257 1018528 . - . ID=gene-AL55_RS10415;Name=AL55_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10415;old_locus_tag=AL55_00952 NZ_KK316828.1 Protein Homology CDS 1017257 1018528 . - 0 ID=cds-WP_003404747.1;Parent=gene-AL55_RS10415;Dbxref=GenBank:WP_003404747.1;Name=WP_003404747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177765.1;locus_tag=AL55_RS10415;product=PPE family protein;protein_id=WP_003404747.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1018543 1018842 . - . ID=gene-AL55_RS10420;Name=AL55_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10420;old_locus_tag=AL55_00953 NZ_KK316828.1 Protein Homology CDS 1018543 1018842 . - 0 ID=cds-WP_003404748.1;Parent=gene-AL55_RS10420;Dbxref=GenBank:WP_003404748.1;Name=WP_003404748.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177766.1;locus_tag=AL55_RS10420;product=PE family protein;protein_id=WP_003404748.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1019286 1021067 . + . ID=gene-AL55_RS10425;Name=betP;gbkey=Gene;gene=betP;gene_biotype=protein_coding;locus_tag=AL55_RS10425;old_locus_tag=AL55_00954 NZ_KK316828.1 Protein Homology CDS 1019286 1021067 . + 0 ID=cds-WP_003404749.1;Parent=gene-AL55_RS10425;Dbxref=GenBank:WP_003404749.1;Name=WP_003404749.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;gene=betP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215432.1;locus_tag=AL55_RS10425;product=BCCT family transporter;protein_id=WP_003404749.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1021064 1021321 . + . ID=gene-AL55_RS0104425;Name=AL55_RS0104425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104425 NZ_KK316828.1 Protein Homology CDS 1021064 1021321 . + 0 ID=cds-WP_003404750.1;Parent=gene-AL55_RS0104425;Dbxref=GenBank:WP_003404750.1;Name=WP_003404750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404750.1;locus_tag=AL55_RS0104425;product=hypothetical protein;protein_id=WP_003404750.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1021410 1021886 . + . ID=gene-AL55_RS10430;Name=AL55_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10430;old_locus_tag=AL55_00955 NZ_KK316828.1 Protein Homology CDS 1021410 1021886 . + 0 ID=cds-WP_003404754.1;Parent=gene-AL55_RS10430;Dbxref=GenBank:WP_003404754.1;Name=WP_003404754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215433.1;locus_tag=AL55_RS10430;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_003404754.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1021883 1022383 . + . ID=gene-AL55_RS10435;Name=AL55_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10435;old_locus_tag=AL55_00956 NZ_KK316828.1 Protein Homology CDS 1021883 1022383 . + 0 ID=cds-WP_003404756.1;Parent=gene-AL55_RS10435;Dbxref=GenBank:WP_003404756.1;Name=WP_003404756.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215434.1;locus_tag=AL55_RS10435;product=GNAT family N-acetyltransferase;protein_id=WP_003404756.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1022520 1022592 . - . ID=gene-AL55_RS10440;Name=AL55_RS10440;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS10440;old_locus_tag=AL55_00957 NZ_KK316828.1 tRNAscan-SE tRNA 1022520 1022592 . - . ID=rna-AL55_RS10440;Parent=gene-AL55_RS10440;anticodon=(pos:complement(1022557..1022559));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS10440;product=tRNA-Arg NZ_KK316828.1 tRNAscan-SE exon 1022520 1022592 . - . ID=exon-AL55_RS10440-1;Parent=rna-AL55_RS10440;anticodon=(pos:complement(1022557..1022559));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS10440;product=tRNA-Arg NZ_KK316828.1 RefSeq gene 1022696 1024015 . - . ID=gene-AL55_RS10445;Name=AL55_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10445;old_locus_tag=AL55_00958 NZ_KK316828.1 Protein Homology CDS 1022696 1024015 . - 0 ID=cds-WP_003404757.1;Parent=gene-AL55_RS10445;Dbxref=GenBank:WP_003404757.1;Name=WP_003404757.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215435.1;locus_tag=AL55_RS10445;product=IS256-like element IS1554 family transposase;protein_id=WP_003404757.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1024303 1024884 . + . ID=gene-AL55_RS10450;Name=AL55_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10450;old_locus_tag=AL55_00959 NZ_KK316828.1 Protein Homology CDS 1024303 1024884 . + 0 ID=cds-WP_003404760.1;Parent=gene-AL55_RS10450;Dbxref=GenBank:WP_003404760.1;Name=WP_003404760.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215436.1;locus_tag=AL55_RS10450;product=IS607-like element IS1535 family transposase;protein_id=WP_003404760.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1024884 1026536 . + . ID=gene-AL55_RS10455;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AL55_RS10455;old_locus_tag=AL55_00960 NZ_KK316828.1 Protein Homology CDS 1024884 1026536 . + 0 ID=cds-WP_003905412.1;Parent=gene-AL55_RS10455;Dbxref=GenBank:WP_003905412.1;Name=WP_003905412.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215437.1;locus_tag=AL55_RS10455;product=IS607 family element RNA-guided endonuclease TnpB;protein_id=WP_003905412.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1026712 1027776 . - . ID=gene-AL55_RS10460;Name=AL55_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10460;old_locus_tag=AL55_00961 NZ_KK316828.1 Protein Homology CDS 1026712 1027776 . - 0 ID=cds-WP_003898648.1;Parent=gene-AL55_RS10460;Dbxref=GenBank:WP_003898648.1;Name=WP_003898648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215438.1;locus_tag=AL55_RS10460;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_003898648.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1027777 1029063 . - . ID=gene-AL55_RS10465;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=AL55_RS10465;old_locus_tag=AL55_00962 NZ_KK316828.1 Protein Homology CDS 1027777 1029063 . - 0 ID=cds-WP_003898649.1;Parent=gene-AL55_RS10465;Dbxref=GenBank:WP_003898649.1;Name=WP_003898649.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mntH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177767.1;locus_tag=AL55_RS10465;product=Nramp family divalent metal transporter;protein_id=WP_003898649.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1029095 1029832 . - . ID=gene-AL55_RS10470;Name=AL55_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10470;old_locus_tag=AL55_00963 NZ_KK316828.1 Protein Homology CDS 1029095 1029832 . - 0 ID=cds-WP_003404764.1;Parent=gene-AL55_RS10470;Dbxref=GenBank:WP_003404764.1;Name=WP_003404764.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215440.1;locus_tag=AL55_RS10470;product=flavodoxin family protein;protein_id=WP_003404764.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1029909 1030985 . - . ID=gene-AL55_RS10475;Name=AL55_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10475;old_locus_tag=AL55_00964 NZ_KK316828.1 Protein Homology CDS 1029909 1030985 . - 0 ID=cds-WP_003404767.1;Parent=gene-AL55_RS10475;Dbxref=GenBank:WP_003404767.1;Name=WP_003404767.1;Ontology_term=GO:0016638;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215441.1;locus_tag=AL55_RS10475;product=NAD(P)H-dependent amine dehydrogenase family protein;protein_id=WP_003404767.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1031039 1031827 . - . ID=gene-AL55_RS10480;Name=AL55_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10480;old_locus_tag=AL55_00965 NZ_KK316828.1 Protein Homology CDS 1031039 1031827 . - 0 ID=cds-WP_003901945.1;Parent=gene-AL55_RS10480;Dbxref=GenBank:WP_003901945.1;Name=WP_003901945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215442.1;locus_tag=AL55_RS10480;product=SDR family oxidoreductase;protein_id=WP_003901945.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1032099 1033211 . + . ID=gene-AL55_RS10485;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AL55_RS10485;old_locus_tag=AL55_00966 NZ_KK316828.1 Protein Homology CDS 1032099 1033211 . + 0 ID=cds-WP_003404775.1;Parent=gene-AL55_RS10485;Dbxref=GenBank:WP_003404775.1;Name=WP_003404775.1;Ontology_term=GO:0006817,GO:0035435,GO:0015415,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;go_process=phosphate ion transport|0006817||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177768.1;locus_tag=AL55_RS10485;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_003404775.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1033224 1034198 . + . ID=gene-AL55_RS10490;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AL55_RS10490;old_locus_tag=AL55_00967 NZ_KK316828.1 Protein Homology CDS 1033224 1034198 . + 0 ID=cds-WP_003404779.1;Parent=gene-AL55_RS10490;Dbxref=GenBank:WP_003404779.1;Name=WP_003404779.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215444.1;locus_tag=AL55_RS10490;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_003404779.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1034195 1035109 . + . ID=gene-AL55_RS10495;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AL55_RS10495;old_locus_tag=AL55_00968 NZ_KK316828.1 Protein Homology CDS 1034195 1035109 . + 0 ID=cds-WP_003898651.1;Parent=gene-AL55_RS10495;Dbxref=GenBank:WP_003898651.1;Name=WP_003898651.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898651.1;locus_tag=AL55_RS10495;product=phosphate ABC transporter permease PstA;protein_id=WP_003898651.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1035116 1037110 . - . ID=gene-AL55_RS10500;Name=pknD;gbkey=Gene;gene=pknD;gene_biotype=protein_coding;locus_tag=AL55_RS10500;old_locus_tag=AL55_00969 NZ_KK316828.1 Protein Homology CDS 1035116 1037110 . - 0 ID=cds-WP_003404782.1;Parent=gene-AL55_RS10500;Dbxref=GenBank:WP_003404782.1;Name=WP_003404782.1;gbkey=CDS;gene=pknD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215446.1;locus_tag=AL55_RS10500;product=serine/threonine protein kinase PknD;protein_id=WP_003404782.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1037132 1038244 . - . ID=gene-AL55_RS10505;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AL55_RS10505;old_locus_tag=AL55_00970 NZ_KK316828.1 Protein Homology CDS 1037132 1038244 . - 0 ID=cds-WP_003898652.1;Parent=gene-AL55_RS10505;Dbxref=GenBank:WP_003898652.1;Name=WP_003898652.1;Ontology_term=GO:0006817,GO:0035435,GO:0015415,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;go_process=phosphate ion transport|0006817||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177769.1;locus_tag=AL55_RS10505;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_003898652.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1038460 1039290 . + . ID=gene-AL55_RS10510;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AL55_RS10510;old_locus_tag=AL55_00971 NZ_KK316828.1 Protein Homology CDS 1038460 1039290 . + 0 ID=cds-WP_003898653.1;Parent=gene-AL55_RS10510;Dbxref=GenBank:WP_003898653.1;Name=WP_003898653.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215448.1;locus_tag=AL55_RS10510;product=phosphate ABC transporter ATP-binding protein;protein_id=WP_003898653.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1039311 1040435 . + . ID=gene-AL55_RS10515;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AL55_RS10515;old_locus_tag=AL55_00972 NZ_KK316828.1 Protein Homology CDS 1039311 1040435 . + 0 ID=cds-WP_003900236.1;Parent=gene-AL55_RS10515;Dbxref=GenBank:WP_003900236.1;Name=WP_003900236.1;Ontology_term=GO:0006817,GO:0035435,GO:0015415,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;go_process=phosphate ion transport|0006817||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177770.1;locus_tag=AL55_RS10515;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_003900236.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1040495 1041511 . + . ID=gene-AL55_RS10520;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AL55_RS10520;old_locus_tag=AL55_00973 NZ_KK316828.1 Protein Homology CDS 1040495 1041511 . + 0 ID=cds-WP_003404792.1;Parent=gene-AL55_RS10520;Dbxref=GenBank:WP_003404792.1;Name=WP_003404792.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177771.1;locus_tag=AL55_RS10520;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_003404792.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1041513 1042418 . + . ID=gene-AL55_RS10525;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AL55_RS10525;old_locus_tag=AL55_00974 NZ_KK316828.1 Protein Homology CDS 1041513 1042418 . + 0 ID=cds-WP_003404794.1;Parent=gene-AL55_RS10525;Dbxref=GenBank:WP_003404794.1;Name=WP_003404794.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215451.1;locus_tag=AL55_RS10525;product=phosphate ABC transporter permease PstA;protein_id=WP_003404794.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1042395 1043216 . - . ID=gene-AL55_RS10530;Name=mku;gbkey=Gene;gene=mku;gene_biotype=protein_coding;locus_tag=AL55_RS10530;old_locus_tag=AL55_00975 NZ_KK316828.1 Protein Homology CDS 1042395 1043216 . - 0 ID=cds-WP_003404795.1;Parent=gene-AL55_RS10530;Dbxref=GenBank:WP_003404795.1;Name=WP_003404795.1;Ontology_term=GO:0006303,GO:0045027;gbkey=CDS;gene=mku;go_function=DNA end binding|0045027||IEA;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215452.1;locus_tag=AL55_RS10530;product=non-homologous end joining protein Ku;protein_id=WP_003404795.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1043332 1045611 . + . ID=gene-AL55_RS10535;Name=ligD;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=AL55_RS10535;old_locus_tag=AL55_00976 NZ_KK316828.1 Protein Homology CDS 1043332 1045611 . + 0 ID=cds-WP_003898655.1;Parent=gene-AL55_RS10535;Dbxref=GenBank:WP_003898655.1;Name=WP_003898655.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910;gbkey=CDS;gene=ligD;go_function=DNA ligase (ATP) activity|0003910||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215453.1;locus_tag=AL55_RS10535;product=ATP-dependent DNA ligase;protein_id=WP_003898655.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1045608 1047542 . + . ID=gene-AL55_RS10540;Name=AL55_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10540;old_locus_tag=AL55_00977 NZ_KK316828.1 Protein Homology CDS 1045608 1047542 . + 0 ID=cds-WP_031695379.1;Parent=gene-AL55_RS10540;Dbxref=GenBank:WP_031695379.1;Name=WP_031695379.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215454.1;locus_tag=AL55_RS10540;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_031695379.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1047789 1048655 . - . ID=gene-AL55_RS10545;Name=AL55_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10545;old_locus_tag=AL55_00978 NZ_KK316828.1 Protein Homology CDS 1047789 1048655 . - 0 ID=cds-WP_003404819.1;Parent=gene-AL55_RS10545;Dbxref=GenBank:WP_003404819.1;Name=WP_003404819.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215455.1;locus_tag=AL55_RS10545;product=TIGR03619 family F420-dependent LLM class oxidoreductase;protein_id=WP_003404819.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1048740 1049513 . - . ID=gene-AL55_RS10550;Name=AL55_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10550;old_locus_tag=AL55_00979 NZ_KK316828.1 Protein Homology CDS 1048740 1049513 . - 0 ID=cds-WP_003404823.1;Parent=gene-AL55_RS10550;Dbxref=GenBank:WP_003404823.1;Name=WP_003404823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215456.1;locus_tag=AL55_RS10550;product=STAS domain-containing protein;protein_id=WP_003404823.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1049556 1049834 . + . ID=gene-AL55_RS10555;Name=AL55_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10555;old_locus_tag=AL55_00980 NZ_KK316828.1 Protein Homology CDS 1049556 1049834 . + 0 ID=cds-WP_003901948.1;Parent=gene-AL55_RS10555;Dbxref=GenBank:WP_003901948.1;Name=WP_003901948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215457.1;locus_tag=AL55_RS10555;product=DUF8092 domain-containing protein;protein_id=WP_003901948.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1049892 1050932 . - . ID=gene-AL55_RS10560;Name=AL55_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10560;old_locus_tag=AL55_00981 NZ_KK316828.1 Protein Homology CDS 1049892 1050932 . - 0 ID=cds-WP_003898656.1;Parent=gene-AL55_RS10560;Dbxref=GenBank:WP_003898656.1;Name=WP_003898656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215458.1;locus_tag=AL55_RS10560;product=DUF4873 domain-containing protein;protein_id=WP_003898656.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1050961 1051437 . + . ID=gene-AL55_RS10565;Name=AL55_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10565;old_locus_tag=AL55_00982 NZ_KK316828.1 Protein Homology CDS 1050961 1051437 . + 0 ID=cds-WP_003404828.1;Parent=gene-AL55_RS10565;Dbxref=GenBank:WP_003404828.1;Name=WP_003404828.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215459.1;locus_tag=AL55_RS10565;product=zinc finger domain-containing protein;protein_id=WP_003404828.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1051455 1052204 . + . ID=gene-AL55_RS10570;Name=AL55_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10570;old_locus_tag=AL55_00983 NZ_KK316828.1 Protein Homology CDS 1051455 1052204 . + 0 ID=cds-WP_003918158.1;Parent=gene-AL55_RS10570;Dbxref=GenBank:WP_003918158.1;Name=WP_003918158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007777012.1;locus_tag=AL55_RS10570;product=SDR family oxidoreductase;protein_id=WP_003918158.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1052220 1053881 . - . ID=gene-AL55_RS10575;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AL55_RS10575;old_locus_tag=AL55_00984 NZ_KK316828.1 Protein Homology CDS 1052220 1053881 . - 0 ID=cds-WP_003404830.1;Parent=gene-AL55_RS10575;Dbxref=GenBank:WP_003404830.1;Name=WP_003404830.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215461.1;locus_tag=AL55_RS10575;product=glucose-6-phosphate isomerase;protein_id=WP_003404830.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1054496 1054726 . - . ID=gene-AL55_RS27575;Name=AL55_RS27575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27575 NZ_KK316828.1 Protein Homology CDS 1054496 1054726 . - 0 ID=cds-WP_003404833.1;Parent=gene-AL55_RS27575;Dbxref=GenBank:WP_003404833.1;Name=WP_003404833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404833.1;locus_tag=AL55_RS27575;product=mycolyltransferase;protein_id=WP_003404833.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1054643 1054837 . + . ID=gene-AL55_RS0104440;Name=AL55_RS0104440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104440 NZ_KK316828.1 Protein Homology CDS 1054643 1054837 . + 0 ID=cds-WP_003404835.1;Parent=gene-AL55_RS0104440;Dbxref=GenBank:WP_003404835.1;Name=WP_003404835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404835.1;locus_tag=AL55_RS0104440;product=hypothetical protein;protein_id=WP_003404835.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1054842 1055159 . - . ID=gene-AL55_RS10580;Name=AL55_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10580;old_locus_tag=AL55_00985 NZ_KK316828.1 Protein Homology CDS 1054842 1055159 . - 0 ID=cds-WP_003404838.1;Parent=gene-AL55_RS10580;Dbxref=GenBank:WP_003404838.1;Name=WP_003404838.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215463.1;locus_tag=AL55_RS10580;product=chorismate mutase;protein_id=WP_003404838.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1055456 1057771 . + . ID=gene-AL55_RS10585;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=AL55_RS10585;old_locus_tag=AL55_00986 NZ_KK316828.1 Protein Homology CDS 1055456 1057771 . + 0 ID=cds-WP_003404859.1;Parent=gene-AL55_RS10585;Dbxref=GenBank:WP_003404859.1;Name=WP_003404859.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177772.1;locus_tag=AL55_RS10585;product=DNA helicase PcrA;protein_id=WP_003404859.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1057852 1058850 . - . ID=gene-AL55_RS10590;Name=AL55_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10590;old_locus_tag=AL55_00987 NZ_KK316828.1 Protein Homology CDS 1057852 1058850 . - 0 ID=cds-WP_003404862.1;Parent=gene-AL55_RS10590;Dbxref=GenBank:WP_003404862.1;Name=WP_003404862.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215465.1;locus_tag=AL55_RS10590;product=M23 family metallopeptidase;protein_id=WP_003404862.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1059160 1060323 . + . ID=gene-AL55_RS10595;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AL55_RS10595;old_locus_tag=AL55_00988 NZ_KK316828.1 Protein Homology CDS 1059160 1060323 . + 0 ID=cds-WP_003898659.1;Parent=gene-AL55_RS10595;Dbxref=GenBank:WP_003898659.1;Name=WP_003898659.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215466.1;locus_tag=AL55_RS10595;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_003898659.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1060345 1061247 . + . ID=gene-AL55_RS10600;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=AL55_RS10600;old_locus_tag=AL55_00989 NZ_KK316828.1 Protein Homology CDS 1060345 1061247 . + 0 ID=cds-WP_009935735.1;Parent=gene-AL55_RS10600;Dbxref=GenBank:WP_009935735.1;Name=WP_009935735.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007776997.1;locus_tag=AL55_RS10600;product=succinate--CoA ligase subunit alpha;protein_id=WP_009935735.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1061310 1062158 . - . ID=gene-AL55_RS10605;Name=AL55_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10605;old_locus_tag=AL55_00990 NZ_KK316828.1 Protein Homology CDS 1061310 1062158 . - 0 ID=cds-WP_003404873.1;Parent=gene-AL55_RS10605;Dbxref=GenBank:WP_003404873.1;Name=WP_003404873.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215468.1;locus_tag=AL55_RS10605;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003404873.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1062323 1063234 . + . ID=gene-AL55_RS10610;Name=AL55_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10610;old_locus_tag=AL55_00991 NZ_KK316828.1 Protein Homology CDS 1062323 1063234 . + 0 ID=cds-WP_003404875.1;Parent=gene-AL55_RS10610;Dbxref=GenBank:WP_003404875.1;Name=WP_003404875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215469.1;locus_tag=AL55_RS10610;product=DUF5336 domain-containing protein;protein_id=WP_003404875.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1063274 1064641 . + . ID=gene-AL55_RS10615;Name=AL55_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10615;old_locus_tag=AL55_00992 NZ_KK316828.1 Protein Homology CDS 1063274 1064641 . + 0 ID=cds-WP_003901049.1;Parent=gene-AL55_RS10615;Dbxref=GenBank:WP_003901049.1;Name=WP_003901049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215470.1;locus_tag=AL55_RS10615;product=cell division protein PerM;protein_id=WP_003901049.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1064757 1065404 . + . ID=gene-AL55_RS10620;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AL55_RS10620;old_locus_tag=AL55_00993 NZ_KK316828.1 Protein Homology CDS 1064757 1065404 . + 0 ID=cds-WP_003898661.1;Parent=gene-AL55_RS10620;Dbxref=GenBank:WP_003898661.1;Name=WP_003898661.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215471.1;locus_tag=AL55_RS10620;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_003898661.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1065401 1066972 . + . ID=gene-AL55_RS10625;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AL55_RS10625;old_locus_tag=AL55_00994 NZ_KK316828.1 Protein Homology CDS 1065401 1066972 . + 0 ID=cds-WP_003404890.1;Parent=gene-AL55_RS10625;Dbxref=GenBank:WP_003404890.1;Name=WP_003404890.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215472.1;locus_tag=AL55_RS10625;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_003404890.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1067079 1068458 . + . ID=gene-AL55_RS10630;Name=AL55_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10630;old_locus_tag=AL55_00995 NZ_KK316828.1 Protein Homology CDS 1067079 1068458 . + 0 ID=cds-WP_003404892.1;Parent=gene-AL55_RS10630;Dbxref=GenBank:WP_003404892.1;Name=WP_003404892.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215473.1;locus_tag=AL55_RS10630;product=sigma 54-interacting transcriptional regulator;protein_id=WP_003404892.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1068451 1070469 . + . ID=gene-AL55_RS10635;Name=AL55_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10635;old_locus_tag=AL55_00996 NZ_KK316828.1 Protein Homology CDS 1068451 1070469 . + 0 ID=cds-WP_003901955.1;Parent=gene-AL55_RS10635;Dbxref=GenBank:WP_003901955.1;Name=WP_003901955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215474.1;locus_tag=AL55_RS10635;product=vWA domain-containing protein;protein_id=WP_003901955.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1070523 1070744 . + . ID=gene-AL55_RS10640;Name=AL55_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10640;old_locus_tag=AL55_00997 NZ_KK316828.1 Protein Homology CDS 1070523 1070744 . + 0 ID=cds-WP_003404898.1;Parent=gene-AL55_RS10640;Dbxref=GenBank:WP_003404898.1;Name=WP_003404898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409620.1;locus_tag=AL55_RS10640;product=antitoxin VapB9;protein_id=WP_003404898.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1070741 1071124 . + . ID=gene-AL55_RS10645;Name=AL55_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10645;old_locus_tag=AL55_00998 NZ_KK316828.1 Protein Homology CDS 1070741 1071124 . + 0 ID=cds-WP_003404903.1;Parent=gene-AL55_RS10645;Dbxref=GenBank:WP_003404903.1;Name=WP_003404903.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215475.1;locus_tag=AL55_RS10645;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003404903.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1071270 1071617 . + . ID=gene-AL55_RS10650;Name=AL55_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10650;old_locus_tag=AL55_00999 NZ_KK316828.1 Protein Homology CDS 1071270 1071617 . + 0 ID=cds-WP_003404907.1;Parent=gene-AL55_RS10650;Dbxref=GenBank:WP_003404907.1;Name=WP_003404907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215476.1;locus_tag=AL55_RS10650;product=hypothetical protein;protein_id=WP_003404907.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1071636 1072310 . - . ID=gene-AL55_RS10655;Name=lprP;gbkey=Gene;gene=lprP;gene_biotype=protein_coding;locus_tag=AL55_RS10655;old_locus_tag=AL55_01000 NZ_KK316828.1 Protein Homology CDS 1071636 1072310 . - 0 ID=cds-WP_003898662.1;Parent=gene-AL55_RS10655;Dbxref=GenBank:WP_003898662.1;Name=WP_003898662.1;gbkey=CDS;gene=lprP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215477.1;locus_tag=AL55_RS10655;product=LppA family lipoprotein;protein_id=WP_003898662.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1072307 1072447 . - . ID=gene-AL55_RS27580;Name=AL55_RS27580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27580 NZ_KK316828.1 Protein Homology CDS 1072307 1072447 . - 0 ID=cds-WP_003404912.1;Parent=gene-AL55_RS27580;Dbxref=GenBank:WP_003404912.1;Name=WP_003404912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404912.1;locus_tag=AL55_RS27580;product=hypothetical protein;protein_id=WP_003404912.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1072493 1073446 . - . ID=gene-AL55_RS27585;Name=AL55_RS27585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27585;old_locus_tag=AL55_01001 NZ_KK316828.1 Protein Homology CDS 1072493 1073446 . - 0 ID=cds-WP_003914276.1;Parent=gene-AL55_RS27585;Dbxref=GenBank:WP_003914276.1;Name=WP_003914276.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018018.6;locus_tag=AL55_RS27585;product=alpha/beta hydrolase family protein;protein_id=WP_003914276.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1073468 1073614 . + . ID=gene-AL55_RS27590;Name=AL55_RS27590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27590 NZ_KK316828.1 Protein Homology CDS 1073468 1073614 . + 0 ID=cds-WP_009937438.1;Parent=gene-AL55_RS27590;Dbxref=GenBank:WP_009937438.1;Name=WP_009937438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009937438.1;locus_tag=AL55_RS27590;product=hypothetical protein;protein_id=WP_009937438.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1073974 1074393 . - . ID=gene-AL55_RS10670;Name=AL55_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10670;old_locus_tag=AL55_01003 NZ_KK316828.1 Protein Homology CDS 1073974 1074393 . - 0 ID=cds-WP_003404920.1;Parent=gene-AL55_RS10670;Dbxref=GenBank:WP_003404920.1;Name=WP_003404920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215480.1;locus_tag=AL55_RS10670;product=hypothetical protein;protein_id=WP_003404920.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1074429 1075031 . - . ID=gene-AL55_RS10675;Name=AL55_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10675;old_locus_tag=AL55_01004 NZ_KK316828.1 Protein Homology CDS 1074429 1075031 . - 0 ID=cds-WP_003900243.1;Parent=gene-AL55_RS10675;Dbxref=GenBank:WP_003900243.1;Name=WP_003900243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215481.2;locus_tag=AL55_RS10675;product=DUF1707 SHOCT-like domain-containing protein;protein_id=WP_003900243.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1075171 1075530 . + . ID=gene-AL55_RS10680;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=AL55_RS10680;old_locus_tag=AL55_01005 NZ_KK316828.1 Protein Homology CDS 1075171 1075530 . + 0 ID=cds-WP_003404935.1;Parent=gene-AL55_RS10680;Dbxref=GenBank:WP_003404935.1;Name=WP_003404935.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215482.1;locus_tag=AL55_RS10680;product=copper-sensing transcriptional repressor CsoR;protein_id=WP_003404935.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1075587 1075883 . + . ID=gene-AL55_RS10685;Name=AL55_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10685;old_locus_tag=AL55_01006 NZ_KK316828.1 Protein Homology CDS 1075587 1075883 . + 0 ID=cds-WP_003404939.1;Parent=gene-AL55_RS10685;Dbxref=GenBank:WP_003404939.1;Name=WP_003404939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215483.1;locus_tag=AL55_RS10685;product=DUF1490 family protein;protein_id=WP_003404939.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1075939 1078251 . + . ID=gene-AL55_RS10690;Name=ctpV;gbkey=Gene;gene=ctpV;gene_biotype=protein_coding;locus_tag=AL55_RS10690;old_locus_tag=AL55_01007 NZ_KK316828.1 Protein Homology CDS 1075939 1078251 . + 0 ID=cds-WP_003404941.1;Parent=gene-AL55_RS10690;Dbxref=GenBank:WP_003404941.1;Name=WP_003404941.1;gbkey=CDS;gene=ctpV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215484.3;locus_tag=AL55_RS10690;product=copper-translocating P-type ATPase;protein_id=WP_003404941.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1078248 1078880 . + . ID=gene-AL55_RS10695;Name=AL55_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10695;old_locus_tag=AL55_01008 NZ_KK316828.1 Protein Homology CDS 1078248 1078880 . + 0 ID=cds-WP_003898666.1;Parent=gene-AL55_RS10695;Dbxref=GenBank:WP_003898666.1;Name=WP_003898666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215485.1;locus_tag=AL55_RS10695;product=DUF5134 domain-containing protein;protein_id=WP_003898666.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1078971 1079780 . - . ID=gene-AL55_RS10700;Name=AL55_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10700;old_locus_tag=AL55_01009 NZ_KK316828.1 Protein Homology CDS 1078971 1079780 . - 0 ID=cds-WP_003404949.1;Parent=gene-AL55_RS10700;Dbxref=GenBank:WP_003404949.1;Name=WP_003404949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215486.1;locus_tag=AL55_RS10700;product=enoyl-CoA hydratase family protein;protein_id=WP_003404949.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1079780 1080946 . - . ID=gene-AL55_RS10705;Name=AL55_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10705;old_locus_tag=AL55_01010 NZ_KK316828.1 Protein Homology CDS 1079780 1080946 . - 0 ID=cds-WP_003898667.1;Parent=gene-AL55_RS10705;Dbxref=GenBank:WP_003898667.1;Name=WP_003898667.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215487.1;locus_tag=AL55_RS10705;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003898667.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1080943 1082946 . - . ID=gene-AL55_RS10710;Name=AL55_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10710;old_locus_tag=AL55_01011 NZ_KK316828.1 Protein Homology CDS 1080943 1082946 . - 0 ID=cds-WP_003900244.1;Parent=gene-AL55_RS10710;Dbxref=GenBank:WP_003900244.1;Name=WP_003900244.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215488.1;locus_tag=AL55_RS10710;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_003900244.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1082952 1084541 . - . ID=gene-AL55_RS10715;Name=AL55_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10715;old_locus_tag=AL55_01012 NZ_KK316828.1 Protein Homology CDS 1082952 1084541 . - 0 ID=cds-WP_003900245.1;Parent=gene-AL55_RS10715;Dbxref=GenBank:WP_003900245.1;Name=WP_003900245.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215489.1;locus_tag=AL55_RS10715;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003900245.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1084544 1085692 . - . ID=gene-AL55_RS10720;Name=AL55_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10720;old_locus_tag=AL55_01013 NZ_KK316828.1 Protein Homology CDS 1084544 1085692 . - 0 ID=cds-WP_003898670.1;Parent=gene-AL55_RS10720;Dbxref=GenBank:WP_003898670.1;Name=WP_003898670.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215490.1;locus_tag=AL55_RS10720;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003898670.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1085689 1087371 . - . ID=gene-AL55_RS10725;Name=AL55_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10725;old_locus_tag=AL55_01014 NZ_KK316828.1 Protein Homology CDS 1085689 1087371 . - 0 ID=cds-WP_003404960.1;Parent=gene-AL55_RS10725;Dbxref=GenBank:WP_003404960.1;Name=WP_003404960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215491.1;locus_tag=AL55_RS10725;product=acyclic terpene utilization AtuA family protein;protein_id=WP_003404960.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1087570 1090341 . + . ID=gene-AL55_RS10730;Name=AL55_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10730;old_locus_tag=AL55_01015 NZ_KK316828.1 Protein Homology CDS 1087570 1090341 . + 0 ID=cds-WP_010886098.1;Parent=gene-AL55_RS10730;Dbxref=GenBank:WP_010886098.1;Name=WP_010886098.1;Ontology_term=GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177773.1;locus_tag=AL55_RS10730;product=PecA family PE domain-processing aspartic protease;protein_id=WP_010886098.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1090558 1091565 . - . ID=gene-AL55_RS28000;Name=AL55_RS28000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28000;old_locus_tag=AL55_01016 NZ_KK316828.1 Protein Homology CDS 1090558 1091565 . - 0 ID=cds-WP_009937445.1;Parent=gene-AL55_RS28000;Dbxref=GenBank:WP_009937445.1;Name=WP_009937445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177774.1;locus_tag=AL55_RS28000;product=PE-PGRS family protein;protein_id=WP_009937445.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1091879 1092073 . - . ID=gene-AL55_RS10740;Name=AL55_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10740;old_locus_tag=AL55_01017 NZ_KK316828.1 Protein Homology CDS 1091879 1092073 . - 0 ID=cds-WP_003907536.1;Parent=gene-AL55_RS10740;Dbxref=GenBank:WP_003907536.1;Name=WP_003907536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215494.2;locus_tag=AL55_RS10740;product=hypothetical protein;protein_id=WP_003907536.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1092095 1092268 . + . ID=gene-AL55_RS10745;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AL55_RS10745;old_locus_tag=AL55_01018 NZ_KK316828.1 Protein Homology CDS 1092095 1092268 . + 0 ID=cds-WP_003405053.1;Parent=gene-AL55_RS10745;Dbxref=GenBank:WP_003405053.1;Name=WP_003405053.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011892777.1;locus_tag=AL55_RS10745;product=50S ribosomal protein L32;protein_id=WP_003405053.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1092287 1093660 . - . ID=gene-AL55_RS10750;Name=AL55_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10750;old_locus_tag=AL55_01019 NZ_KK316828.1 Protein Homology CDS 1092287 1093660 . - 0 ID=cds-WP_003910962.1;Parent=gene-AL55_RS10750;Dbxref=GenBank:WP_003910962.1;Name=WP_003910962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177775.1;locus_tag=AL55_RS10750;product=PE-PGRS family protein;protein_id=WP_003910962.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1094031 1094717 . + . ID=gene-AL55_RS10755;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=AL55_RS10755;old_locus_tag=AL55_01020 NZ_KK316828.1 Protein Homology CDS 1094031 1094717 . + 0 ID=cds-WP_003916757.1;Parent=gene-AL55_RS10755;Dbxref=GenBank:WP_003916757.1;Name=WP_003916757.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215496.2;locus_tag=AL55_RS10755;product=two-component system response regulator MprA;protein_id=WP_003916757.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1094717 1096231 . + . ID=gene-AL55_RS10760;Name=mprB;gbkey=Gene;gene=mprB;gene_biotype=protein_coding;locus_tag=AL55_RS10760;old_locus_tag=AL55_01021 NZ_KK316828.1 Protein Homology CDS 1094717 1096231 . + 0 ID=cds-WP_003405123.1;Parent=gene-AL55_RS10760;Dbxref=GenBank:WP_003405123.1;Name=WP_003405123.1;gbkey=CDS;gene=mprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215497.1;locus_tag=AL55_RS10760;product=two-component system sensor histidine kinase MprB;protein_id=WP_003405123.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1096275 1097669 . + . ID=gene-AL55_RS10765;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=AL55_RS10765;old_locus_tag=AL55_01022 NZ_KK316828.1 Protein Homology CDS 1096275 1097669 . + 0 ID=cds-WP_003901059.1;Parent=gene-AL55_RS10765;Dbxref=GenBank:WP_003901059.1;Name=WP_003901059.1;gbkey=CDS;gene=pepD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215498.1;locus_tag=AL55_RS10765;product=serine protease PepD;protein_id=WP_003901059.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1097669 1098214 . + . ID=gene-AL55_RS10770;Name=AL55_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10770;old_locus_tag=AL55_01023 NZ_KK316828.1 Protein Homology CDS 1097669 1098214 . + 0 ID=cds-WP_003405127.1;Parent=gene-AL55_RS10770;Dbxref=GenBank:WP_003405127.1;Name=WP_003405127.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215499.1;locus_tag=AL55_RS10770;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_003405127.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1098234 1098689 . - . ID=gene-AL55_RS10775;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=AL55_RS10775;old_locus_tag=AL55_01024 NZ_KK316828.1 Protein Homology CDS 1098234 1098689 . - 0 ID=cds-WP_003405128.1;Parent=gene-AL55_RS10775;Dbxref=GenBank:WP_003405128.1;Name=WP_003405128.1;Ontology_term=GO:0034220,GO:0008381,GO:0016020;gbkey=CDS;gene=mscL;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215500.1;locus_tag=AL55_RS10775;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_003405128.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1099012 1099758 . + . ID=gene-AL55_RS10780;Name=AL55_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10780;old_locus_tag=AL55_01025 NZ_KK316828.1 Protein Homology CDS 1099012 1099758 . + 0 ID=cds-WP_003900248.1;Parent=gene-AL55_RS10780;Dbxref=GenBank:WP_003900248.1;Name=WP_003900248.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215501.1;locus_tag=AL55_RS10780;product=ABC transporter ATP-binding protein;protein_id=WP_003900248.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1099751 1102318 . + . ID=gene-AL55_RS10785;Name=AL55_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10785;old_locus_tag=AL55_01026 NZ_KK316828.1 Protein Homology CDS 1099751 1102318 . + 0 ID=cds-WP_031695381.1;Parent=gene-AL55_RS10785;Dbxref=GenBank:WP_031695381.1;Name=WP_031695381.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215502.1;locus_tag=AL55_RS10785;product=ABC transporter permease;protein_id=WP_031695381.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1102325 1103485 . + . ID=gene-AL55_RS10790;Name=AL55_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10790;old_locus_tag=AL55_01027 NZ_KK316828.1 Protein Homology CDS 1102325 1103485 . + 0 ID=cds-WP_003905422.1;Parent=gene-AL55_RS10790;Dbxref=GenBank:WP_003905422.1;Name=WP_003905422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215503.1;locus_tag=AL55_RS10790;product=lipocalin-like domain-containing protein;protein_id=WP_003905422.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1103614 1104591 . - . ID=gene-AL55_RS10795;Name=grcC;gbkey=Gene;gene=grcC;gene_biotype=protein_coding;locus_tag=AL55_RS10795;old_locus_tag=AL55_01028 NZ_KK316828.1 Protein Homology CDS 1103614 1104591 . - 0 ID=cds-WP_003405136.1;Parent=gene-AL55_RS10795;Dbxref=GenBank:WP_003405136.1;Name=WP_003405136.1;gbkey=CDS;gene=grcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215504.1;locus_tag=AL55_RS10795;product=polyprenyl-diphosphate synthase GrcC;protein_id=WP_003405136.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1104652 1105308 . - . ID=gene-AL55_RS10800;Name=AL55_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10800;old_locus_tag=AL55_01029 NZ_KK316828.1 Protein Homology CDS 1104652 1105308 . - 0 ID=cds-WP_003405138.1;Parent=gene-AL55_RS10800;Dbxref=GenBank:WP_003405138.1;Name=WP_003405138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215505.1;locus_tag=AL55_RS10800;product=SAF domain-containing protein;protein_id=WP_003405138.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1105381 1105713 . - . ID=gene-AL55_RS10805;Name=AL55_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10805;old_locus_tag=AL55_01030 NZ_KK316828.1 Protein Homology CDS 1105381 1105713 . - 0 ID=cds-WP_003405142.1;Parent=gene-AL55_RS10805;Dbxref=GenBank:WP_003405142.1;Name=WP_003405142.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215506.1;locus_tag=AL55_RS10805;product=FmdB family zinc ribbon protein;protein_id=WP_003405142.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1105787 1106380 . - . ID=gene-AL55_RS10810;Name=AL55_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10810;old_locus_tag=AL55_01031 NZ_KK316828.1 Protein Homology CDS 1105787 1106380 . - 0 ID=cds-WP_003901063.1;Parent=gene-AL55_RS10810;Dbxref=GenBank:WP_003901063.1;Name=WP_003901063.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215507.1;locus_tag=AL55_RS10810;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_003901063.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1106481 1107401 . + . ID=gene-AL55_RS10815;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AL55_RS10815;old_locus_tag=AL55_01032 NZ_KK316828.1 Protein Homology CDS 1106481 1107401 . + 0 ID=cds-WP_003405145.1;Parent=gene-AL55_RS10815;Dbxref=GenBank:WP_003405145.1;Name=WP_003405145.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215508.1;locus_tag=AL55_RS10815;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_003405145.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1107478 1108758 . + . ID=gene-AL55_RS10820;Name=glp;gbkey=Gene;gene=glp;gene_biotype=protein_coding;locus_tag=AL55_RS10820;old_locus_tag=AL55_01033 NZ_KK316828.1 Protein Homology CDS 1107478 1108758 . + 0 ID=cds-WP_003898680.1;Parent=gene-AL55_RS10820;Dbxref=GenBank:WP_003898680.1;Name=WP_003898680.1;Ontology_term=GO:1990586;gbkey=CDS;gene=glp;go_component=divisome complex|1990586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177776.1;locus_tag=AL55_RS10820;product=molybdotransferase-like divisome protein Glp;protein_id=WP_003898680.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1108779 1109432 . + . ID=gene-AL55_RS10825;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=AL55_RS10825;old_locus_tag=AL55_01034 NZ_KK316828.1 Protein Homology CDS 1108779 1109432 . + 0 ID=cds-WP_176722929.1;Parent=gene-AL55_RS10825;Dbxref=GenBank:WP_176722929.1;Name=WP_176722929.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898681.1;locus_tag=AL55_RS10825;product=GNAT family N-acetyltransferase;protein_id=WP_176722929.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1109593 1110669 . + . ID=gene-AL55_RS10830;Name=sepX;gbkey=Gene;gene=sepX;gene_biotype=protein_coding;gene_synonym=glpR;locus_tag=AL55_RS10830;old_locus_tag=AL55_01035 NZ_KK316828.1 Protein Homology CDS 1109593 1110669 . + 0 ID=cds-WP_003901065.1;Parent=gene-AL55_RS10830;Dbxref=GenBank:WP_003901065.1;Name=WP_003901065.1;Ontology_term=GO:1990586;gbkey=CDS;gene=sepX;go_component=divisome complex|1990586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215511.1;locus_tag=AL55_RS10830;product=divisome protein SepX/GlpR;protein_id=WP_003901065.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1110720 1110795 . + . ID=gene-AL55_RS10835;Name=AL55_RS10835;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS10835;old_locus_tag=AL55_01036 NZ_KK316828.1 tRNAscan-SE tRNA 1110720 1110795 . + . ID=rna-AL55_RS10835;Parent=gene-AL55_RS10835;anticodon=(pos:1110753..1110755);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS10835;product=tRNA-Ala NZ_KK316828.1 tRNAscan-SE exon 1110720 1110795 . + . ID=exon-AL55_RS10835-1;Parent=rna-AL55_RS10835;anticodon=(pos:1110753..1110755);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS10835;product=tRNA-Ala NZ_KK316828.1 RefSeq gene 1111070 1111321 . + . ID=gene-AL55_RS0104450;Name=AL55_RS0104450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104450 NZ_KK316828.1 Protein Homology CDS 1111070 1111321 . + 0 ID=cds-WP_003405150.1;Parent=gene-AL55_RS0104450;Dbxref=GenBank:WP_003405150.1;Name=WP_003405150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030028.1;locus_tag=AL55_RS0104450;product=hypothetical protein;protein_id=WP_003405150.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1111382 1111591 . - . ID=gene-AL55_RS0104455;Name=AL55_RS0104455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104455 NZ_KK316828.1 Protein Homology CDS 1111382 1111591 . - 0 ID=cds-WP_003405160.1;Parent=gene-AL55_RS0104455;Dbxref=GenBank:WP_003405160.1;Name=WP_003405160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627059.1;locus_tag=AL55_RS0104455;product=hypothetical protein;protein_id=WP_003405160.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1111595 1112050 . - . ID=gene-AL55_RS0104460;Name=AL55_RS0104460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104460 NZ_KK316828.1 Protein Homology CDS 1111595 1112050 . - 0 ID=cds-WP_003908620.1;Parent=gene-AL55_RS0104460;Dbxref=GenBank:WP_003908620.1;Name=WP_003908620.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF019846.6;locus_tag=AL55_RS0104460;product=class I SAM-dependent methyltransferase;protein_id=WP_003908620.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1111957 1112958 . + . ID=gene-AL55_RS10840;Name=AL55_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10840;old_locus_tag=AL55_01038 NZ_KK316828.1 Protein Homology CDS 1111957 1112958 . + 0 ID=cds-WP_003405164.1;Parent=gene-AL55_RS10840;Dbxref=GenBank:WP_003405164.1;Name=WP_003405164.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215513.1;locus_tag=AL55_RS10840;product=GNAT family N-acetyltransferase;protein_id=WP_003405164.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1112955 1113044 . + . ID=gene-AL55_RS27225;Name=AL55_RS27225;end_range=1113044,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27225;partial=true;pseudo=true;start_range=.,1112955 NZ_KK316828.1 Protein Homology CDS 1112955 1113044 . + 0 ID=cds-AL55_RS27225;Parent=gene-AL55_RS27225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1113044,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872787.1;locus_tag=AL55_RS27225;partial=true;product=DUF5642 family protein;pseudo=true;start_range=.,1112955;transl_table=11 NZ_KK316828.1 RefSeq gene 1113075 1113734 . + . ID=gene-AL55_RS10845;Name=AL55_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10845;old_locus_tag=AL55_01039 NZ_KK316828.1 Protein Homology CDS 1113075 1113734 . + 0 ID=cds-WP_003911352.1;Parent=gene-AL55_RS10845;Dbxref=GenBank:WP_003911352.1;Name=WP_003911352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911352.1;locus_tag=AL55_RS10845;product=DUF5642 family protein;protein_id=WP_003911352.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1113740 1114336 . - . ID=gene-AL55_RS10850;Name=AL55_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10850;old_locus_tag=AL55_01040 NZ_KK316828.1 Protein Homology CDS 1113740 1114336 . - 0 ID=cds-WP_003913180.1;Parent=gene-AL55_RS10850;Dbxref=GenBank:WP_003913180.1;Name=WP_003913180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632682.1;locus_tag=AL55_RS10850;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_003913180.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1114394 1115602 . + . ID=gene-AL55_RS10855;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=AL55_RS10855;old_locus_tag=AL55_01041 NZ_KK316828.1 Protein Homology CDS 1114394 1115602 . + 0 ID=cds-WP_003405169.1;Parent=gene-AL55_RS10855;Dbxref=GenBank:WP_003405169.1;Name=WP_003405169.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215517.1;locus_tag=AL55_RS10855;product=arginine deiminase;protein_id=WP_003405169.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1115637 1117148 . - . ID=gene-AL55_RS10860;Name=AL55_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10860;old_locus_tag=AL55_01042 NZ_KK316828.1 Protein Homology CDS 1115637 1117148 . - 0 ID=cds-WP_003901066.1;Parent=gene-AL55_RS10860;Dbxref=GenBank:WP_003901066.1;Name=WP_003901066.1;Ontology_term=GO:0004169;gbkey=CDS;go_function=dolichyl-phosphate-mannose-protein mannosyltransferase activity|0004169||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215518.1;locus_tag=AL55_RS10860;product=dolichyl-phosphate-mannose--protein mannosyltransferase;protein_id=WP_003901066.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1117231 1118088 . + . ID=gene-AL55_RS10865;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=AL55_RS10865;old_locus_tag=AL55_01043 NZ_KK316828.1 Protein Homology CDS 1117231 1118088 . + 0 ID=cds-WP_003405173.1;Parent=gene-AL55_RS10865;Dbxref=GenBank:WP_003405173.1;Name=WP_003405173.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215519.1;locus_tag=AL55_RS10865;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_003405173.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1118098 1119342 . - . ID=gene-AL55_RS10870;Name=AL55_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10870;old_locus_tag=AL55_01044 NZ_KK316828.1 Protein Homology CDS 1118098 1119342 . - 0 ID=cds-WP_031646945.1;Parent=gene-AL55_RS10870;Dbxref=GenBank:WP_031646945.1;Name=WP_031646945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215520.1;locus_tag=AL55_RS10870;product=hypothetical protein;protein_id=WP_031646945.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1119416 1120702 . - . ID=gene-AL55_RS10875;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=AL55_RS10875;old_locus_tag=AL55_01045 NZ_KK316828.1 Protein Homology CDS 1119416 1120702 . - 0 ID=cds-WP_003405178.1;Parent=gene-AL55_RS10875;Dbxref=GenBank:WP_003405178.1;Name=WP_003405178.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405178.1;locus_tag=AL55_RS10875;product=aminodeoxychorismate synthase component I;protein_id=WP_003405178.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1120908 1122611 . + . ID=gene-AL55_RS10880;Name=AL55_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10880;old_locus_tag=AL55_01046 NZ_KK316828.1 Protein Homology CDS 1120908 1122611 . + 0 ID=cds-WP_003405180.1;Parent=gene-AL55_RS10880;Dbxref=GenBank:WP_003405180.1;Name=WP_003405180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215522.1;locus_tag=AL55_RS10880;product=hypothetical protein;protein_id=WP_003405180.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1122638 1124197 . - . ID=gene-AL55_RS10885;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AL55_RS10885;old_locus_tag=AL55_01047 NZ_KK316828.1 Protein Homology CDS 1122638 1124197 . - 0 ID=cds-WP_003405183.1;Parent=gene-AL55_RS10885;Dbxref=GenBank:WP_003405183.1;Name=WP_003405183.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215523.1;locus_tag=AL55_RS10885;product=methionine--tRNA ligase;protein_id=WP_003405183.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1124217 1125077 . + . ID=gene-AL55_RS10890;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=AL55_RS10890;old_locus_tag=AL55_01048 NZ_KK316828.1 Protein Homology CDS 1124217 1125077 . + 0 ID=cds-WP_003898688.1;Parent=gene-AL55_RS10890;Dbxref=GenBank:WP_003898688.1;Name=WP_003898688.1;gbkey=CDS;gene=tatD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898688.1;locus_tag=AL55_RS10890;product=TatD family hydrolase;protein_id=WP_003898688.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1125246 1126373 . + . ID=gene-AL55_RS10895;Name=rpfB;gbkey=Gene;gene=rpfB;gene_biotype=protein_coding;locus_tag=AL55_RS10895;old_locus_tag=AL55_01049 NZ_KK316828.1 Protein Homology CDS 1125246 1126373 . + 0 ID=cds-WP_031695384.1;Parent=gene-AL55_RS10895;Dbxref=GenBank:WP_031695384.1;Name=WP_031695384.1;gbkey=CDS;gene=rpfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031657245.1;locus_tag=AL55_RS10895;product=resuscitation-promoting factor protein RpfB;protein_id=WP_031695384.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1126346 1127299 . + . ID=gene-AL55_RS10900;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AL55_RS10900;old_locus_tag=AL55_01050 NZ_KK316828.1 Protein Homology CDS 1126346 1127299 . + 0 ID=cds-WP_003405191.1;Parent=gene-AL55_RS10900;Dbxref=GenBank:WP_003405191.1;Name=WP_003405191.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215526.1;locus_tag=AL55_RS10900;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_003405191.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1127349 1128305 . + . ID=gene-AL55_RS10905;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=AL55_RS10905;old_locus_tag=AL55_01051 NZ_KK316828.1 Protein Homology CDS 1127349 1128305 . + 0 ID=cds-WP_003898690.1;Parent=gene-AL55_RS10905;Dbxref=GenBank:WP_003898690.1;Name=WP_003898690.1;Ontology_term=GO:0016114,GO:0005524,GO:0050515;gbkey=CDS;gene=ispE;go_function=ATP binding|0005524||IEA,4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912970.1;locus_tag=AL55_RS10905;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_003898690.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1128322 1128615 . + . ID=gene-AL55_RS10910;Name=AL55_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10910;old_locus_tag=AL55_01052 NZ_KK316828.1 Protein Homology CDS 1128322 1128615 . + 0 ID=cds-WP_003900254.1;Parent=gene-AL55_RS10910;Dbxref=GenBank:WP_003900254.1;Name=WP_003900254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215528.1;locus_tag=AL55_RS10910;product=hypothetical protein;protein_id=WP_003900254.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1128819 1130453 . + . ID=gene-AL55_RS10915;Name=AL55_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10915;old_locus_tag=AL55_01053 NZ_KK316828.1 Protein Homology CDS 1128819 1130453 . + 0 ID=cds-WP_003405202.1;Parent=gene-AL55_RS10915;Dbxref=GenBank:WP_003405202.1;Name=WP_003405202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215529.1;locus_tag=AL55_RS10915;product=fatty acyl-AMP ligase;protein_id=WP_003405202.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1130527 1131102 . - . ID=gene-AL55_RS10920;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AL55_RS10920;old_locus_tag=AL55_01054 NZ_KK316828.1 Protein Homology CDS 1130527 1131102 . - 0 ID=cds-WP_003405251.1;Parent=gene-AL55_RS10920;Dbxref=GenBank:WP_003405251.1;Name=WP_003405251.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215530.1;locus_tag=AL55_RS10920;product=aminoacyl-tRNA hydrolase;protein_id=WP_003405251.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1131115 1131762 . - . ID=gene-AL55_RS10925;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=AL55_RS10925;old_locus_tag=AL55_01055 NZ_KK316828.1 Protein Homology CDS 1131115 1131762 . - 0 ID=cds-WP_003405254.1;Parent=gene-AL55_RS10925;Dbxref=GenBank:WP_003405254.1;Name=WP_003405254.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215531.1;locus_tag=AL55_RS10925;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_003405254.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1131979 1132587 . - . ID=gene-AL55_RS10930;Name=AL55_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10930;old_locus_tag=AL55_01056 NZ_KK316828.1 Protein Homology CDS 1131979 1132587 . - 0 ID=cds-WP_042507738.1;Parent=gene-AL55_RS10930;Dbxref=GenBank:WP_042507738.1;Name=WP_042507738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014941374.1;locus_tag=AL55_RS10930;product=LpqN/LpqT family lipoprotein;protein_id=WP_042507738.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1132695 1133675 . - . ID=gene-AL55_RS10935;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=AL55_RS10935;old_locus_tag=AL55_01057 NZ_KK316828.1 Protein Homology CDS 1132695 1133675 . - 0 ID=cds-WP_003405263.1;Parent=gene-AL55_RS10935;Dbxref=GenBank:WP_003405263.1;Name=WP_003405263.1;Ontology_term=GO:0009058,GO:0000287,GO:0004749;gbkey=CDS;gene=prsA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215533.1;locus_tag=AL55_RS10935;product=ribose-phosphate diphosphokinase;protein_id=WP_003405263.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1133767 1135254 . - . ID=gene-AL55_RS10940;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AL55_RS10940;old_locus_tag=AL55_01058 NZ_KK316828.1 Protein Homology CDS 1133767 1135254 . - 0 ID=cds-WP_003405267.1;Parent=gene-AL55_RS10940;Dbxref=GenBank:WP_003405267.1;Name=WP_003405267.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215534.1;locus_tag=AL55_RS10940;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_003405267.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1135270 1135341 . - . ID=gene-AL55_RS10945;Name=AL55_RS10945;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS10945;old_locus_tag=AL55_01059 NZ_KK316828.1 tRNAscan-SE tRNA 1135270 1135341 . - . ID=rna-AL55_RS10945;Parent=gene-AL55_RS10945;anticodon=(pos:complement(1135306..1135308));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS10945;product=tRNA-Gln NZ_KK316828.1 tRNAscan-SE exon 1135270 1135341 . - . ID=exon-AL55_RS10945-1;Parent=rna-AL55_RS10945;anticodon=(pos:complement(1135306..1135308));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS10945;product=tRNA-Gln NZ_KK316828.1 RefSeq gene 1135509 1136102 . + . ID=gene-AL55_RS10950;Name=AL55_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10950;old_locus_tag=AL55_01060 NZ_KK316828.1 Protein Homology CDS 1135509 1136102 . + 0 ID=cds-WP_003405271.1;Parent=gene-AL55_RS10950;Dbxref=GenBank:WP_003405271.1;Name=WP_003405271.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215535.1;locus_tag=AL55_RS10950;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003405271.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1136161 1139865 . + . ID=gene-AL55_RS10955;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=AL55_RS10955;old_locus_tag=AL55_01061 NZ_KK316828.1 Protein Homology CDS 1136161 1139865 . + 0 ID=cds-WP_003405273.1;Parent=gene-AL55_RS10955;Dbxref=GenBank:WP_003405273.1;Name=WP_003405273.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215536.1;locus_tag=AL55_RS10955;product=transcription-repair coupling factor;protein_id=WP_003405273.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1139865 1140842 . + . ID=gene-AL55_RS10960;Name=AL55_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10960;old_locus_tag=AL55_01062 NZ_KK316828.1 Protein Homology CDS 1139865 1140842 . + 0 ID=cds-WP_003405276.1;Parent=gene-AL55_RS10960;Dbxref=GenBank:WP_003405276.1;Name=WP_003405276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215537.1;locus_tag=AL55_RS10960;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_003405276.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1140930 1141661 . + . ID=gene-AL55_RS10965;Name=lpqU;gbkey=Gene;gene=lpqU;gene_biotype=protein_coding;locus_tag=AL55_RS10965;old_locus_tag=AL55_01063 NZ_KK316828.1 Protein Homology CDS 1140930 1141661 . + 0 ID=cds-WP_003900256.1;Parent=gene-AL55_RS10965;Dbxref=GenBank:WP_003900256.1;Name=WP_003900256.1;Ontology_term=GO:0004553;gbkey=CDS;gene=lpqU;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215538.1;locus_tag=AL55_RS10965;product=lytic transglycosylase domain-containing protein;protein_id=WP_003900256.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1141758 1143047 . + . ID=gene-AL55_RS10970;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AL55_RS10970;old_locus_tag=AL55_01064 NZ_KK316828.1 Protein Homology CDS 1141758 1143047 . + 0 ID=cds-WP_003901975.1;Parent=gene-AL55_RS10970;Dbxref=GenBank:WP_003901975.1;Name=WP_003901975.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215539.1;locus_tag=AL55_RS10970;product=phosphopyruvate hydratase;protein_id=WP_003901975.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1143052 1143738 . + . ID=gene-AL55_RS10975;Name=AL55_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10975;old_locus_tag=AL55_01065 NZ_KK316828.1 Protein Homology CDS 1143052 1143738 . + 0 ID=cds-WP_003405293.1;Parent=gene-AL55_RS10975;Dbxref=GenBank:WP_003405293.1;Name=WP_003405293.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215540.1;locus_tag=AL55_RS10975;product=FtsB family cell division protein;protein_id=WP_003405293.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1143731 1144222 . + . ID=gene-AL55_RS10980;Name=AL55_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS10980;old_locus_tag=AL55_01066 NZ_KK316828.1 Protein Homology CDS 1143731 1144222 . + 0 ID=cds-WP_003405296.1;Parent=gene-AL55_RS10980;Dbxref=GenBank:WP_003405296.1;Name=WP_003405296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901072.1;locus_tag=AL55_RS10980;product=DUF501 domain-containing protein;protein_id=WP_003405296.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1144213 1145172 . + . ID=gene-AL55_RS10985;Name=ppx2;gbkey=Gene;gene=ppx2;gene_biotype=protein_coding;locus_tag=AL55_RS10985;old_locus_tag=AL55_01067 NZ_KK316828.1 Protein Homology CDS 1144213 1145172 . + 0 ID=cds-WP_003405299.1;Parent=gene-AL55_RS10985;Dbxref=GenBank:WP_003405299.1;Name=WP_003405299.1;gbkey=CDS;gene=ppx2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215542.1;locus_tag=AL55_RS10985;product=exopolyphosphatase Ppx2;protein_id=WP_003405299.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1145621 1146301 . - . ID=gene-AL55_RS10990;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=AL55_RS10990;old_locus_tag=AL55_01068 NZ_KK316828.1 Protein Homology CDS 1145621 1146301 . - 0 ID=cds-WP_003905437.1;Parent=gene-AL55_RS10990;Dbxref=GenBank:WP_003905437.1;Name=WP_003905437.1;gbkey=CDS;gene=kdpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215543.1;locus_tag=AL55_RS10990;product=two-component system response regulator KdpE;protein_id=WP_003905437.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1146298 1148880 . - . ID=gene-AL55_RS10995;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=AL55_RS10995;old_locus_tag=AL55_01069 NZ_KK316828.1 Protein Homology CDS 1146298 1148880 . - 0 ID=cds-WP_003898694.1;Parent=gene-AL55_RS10995;Dbxref=GenBank:WP_003898694.1;Name=WP_003898694.1;gbkey=CDS;gene=kdpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215544.1;locus_tag=AL55_RS10995;product=sensor histidine kinase KdpD;protein_id=WP_003898694.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1148971 1149117 . + . ID=gene-AL55_RS0104475;Name=AL55_RS0104475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104475 NZ_KK316828.1 Protein Homology CDS 1148971 1149117 . + 0 ID=cds-WP_003405313.1;Parent=gene-AL55_RS0104475;Dbxref=GenBank:WP_003405313.1;Name=WP_003405313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405313.1;locus_tag=AL55_RS0104475;product=hypothetical protein;protein_id=WP_003405313.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1149114 1149206 . + . ID=gene-AL55_RS11000;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=AL55_RS11000;old_locus_tag=AL55_01070 NZ_KK316828.1 Protein Homology CDS 1149114 1149206 . + 0 ID=cds-WP_003405316.1;Parent=gene-AL55_RS11000;Dbxref=GenBank:WP_003405316.1;Name=WP_003405316.1;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177636.1;locus_tag=AL55_RS11000;product=K(+)-transporting ATPase subunit F;protein_id=WP_003405316.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1149206 1150921 . + . ID=gene-AL55_RS11005;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=AL55_RS11005;old_locus_tag=AL55_01071 NZ_KK316828.1 Protein Homology CDS 1149206 1150921 . + 0 ID=cds-WP_003405318.1;Parent=gene-AL55_RS11005;Dbxref=GenBank:WP_003405318.1;Name=WP_003405318.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215545.1;locus_tag=AL55_RS11005;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_003405318.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1150918 1153047 . + . ID=gene-AL55_RS11010;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=AL55_RS11010;old_locus_tag=AL55_01072 NZ_KK316828.1 Protein Homology CDS 1150918 1153047 . + 0 ID=cds-WP_003405320.1;Parent=gene-AL55_RS11010;Dbxref=GenBank:WP_003405320.1;Name=WP_003405320.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215546.1;locus_tag=AL55_RS11010;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_003405320.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1153047 1153616 . + . ID=gene-AL55_RS11015;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=AL55_RS11015;old_locus_tag=AL55_01073 NZ_KK316828.1 Protein Homology CDS 1153047 1153616 . + 0 ID=cds-WP_003405322.1;Parent=gene-AL55_RS11015;Dbxref=GenBank:WP_003405322.1;Name=WP_003405322.1;gbkey=CDS;gene=kdpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215547.1;locus_tag=AL55_RS11015;product=K(+)-transporting ATPase subunit C;protein_id=WP_003405322.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1153620 1155149 . - . ID=gene-AL55_RS11020;Name=trcS;gbkey=Gene;gene=trcS;gene_biotype=protein_coding;locus_tag=AL55_RS11020;old_locus_tag=AL55_01074 NZ_KK316828.1 Protein Homology CDS 1153620 1155149 . - 0 ID=cds-WP_003405324.1;Parent=gene-AL55_RS11020;Dbxref=GenBank:WP_003405324.1;Name=WP_003405324.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;gene=trcS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215548.1;locus_tag=AL55_RS11020;product=two component system sensor histidine kinase TrcS;protein_id=WP_003405324.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1155157 1155930 . - . ID=gene-AL55_RS11025;Name=trcR;gbkey=Gene;gene=trcR;gene_biotype=protein_coding;locus_tag=AL55_RS11025;old_locus_tag=AL55_01075 NZ_KK316828.1 Protein Homology CDS 1155157 1155930 . - 0 ID=cds-WP_003405328.1;Parent=gene-AL55_RS11025;Dbxref=GenBank:WP_003405328.1;Name=WP_003405328.1;gbkey=CDS;gene=trcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215549.1;locus_tag=AL55_RS11025;product=two-component system response regulator TrcR;protein_id=WP_003405328.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1156112 1157552 . - . ID=gene-AL55_RS25715;Name=AL55_RS25715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25715;pseudo=true NZ_KK316828.1 Protein Homology CDS 1156112 1157552 . - 0 ID=cds-AL55_RS25715;Parent=gene-AL55_RS25715;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612244.1;locus_tag=AL55_RS25715;product=ISNCY family transposase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1157738 1158022 . - . ID=gene-AL55_RS11040;Name=esxV;gbkey=Gene;gene=esxV;gene_biotype=protein_coding;locus_tag=AL55_RS11040;old_locus_tag=AL55_01079 NZ_KK316828.1 Protein Homology CDS 1157738 1158022 . - 0 ID=cds-WP_003405333.1;Parent=gene-AL55_RS11040;Dbxref=GenBank:WP_003405333.1;Name=WP_003405333.1;gbkey=CDS;gene=esxV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215553.1;locus_tag=AL55_RS11040;product=type VII secretion system protein EsxV;protein_id=WP_003405333.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1158049 1158345 . - . ID=gene-AL55_RS11045;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=protein_coding;locus_tag=AL55_RS11045;old_locus_tag=AL55_01080 NZ_KK316828.1 Protein Homology CDS 1158049 1158345 . - 0 ID=cds-WP_003405345.1;Parent=gene-AL55_RS11045;Dbxref=GenBank:WP_003405345.1;Name=WP_003405345.1;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215554.1;locus_tag=AL55_RS11045;product=type VII secretion system ESX-5 protein EsxJ;protein_id=WP_003405345.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1158491 1159666 . - . ID=gene-AL55_RS11050;Name=AL55_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11050;old_locus_tag=AL55_01081 NZ_KK316828.1 Protein Homology CDS 1158491 1159666 . - 0 ID=cds-WP_003405368.1;Parent=gene-AL55_RS11050;Dbxref=GenBank:WP_003405368.1;Name=WP_003405368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177778.1;locus_tag=AL55_RS11050;product=PPE family protein;protein_id=WP_003405368.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1159743 1160570 . - . ID=gene-AL55_RS11055;Name=AL55_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11055;old_locus_tag=AL55_01082 NZ_KK316828.1 Protein Homology CDS 1159743 1160570 . - 0 ID=cds-WP_003405370.1;Parent=gene-AL55_RS11055;Dbxref=GenBank:WP_003405370.1;Name=WP_003405370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177779.1;locus_tag=AL55_RS11055;product=PE family protein PE8;protein_id=WP_003405370.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1161358 1161597 . - . ID=gene-AL55_RS0104485;Name=AL55_RS0104485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104485 NZ_KK316828.1 Protein Homology CDS 1161358 1161597 . - 0 ID=cds-WP_003405375.1;Parent=gene-AL55_RS0104485;Dbxref=GenBank:WP_003405375.1;Name=WP_003405375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936438.1;locus_tag=AL55_RS0104485;product=hypothetical protein;protein_id=WP_003405375.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1161766 1162693 . - . ID=gene-AL55_RS25730;Name=AL55_RS25730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25730;old_locus_tag=AL55_01083;pseudo=true NZ_KK316828.1 Protein Homology CDS 1161766 1162693 . - 0 ID=cds-AL55_RS25730;Parent=gene-AL55_RS25730;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612358.1;locus_tag=AL55_RS25730;product=IS5-like element ISMt1 family transposase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1162976 1164001 . - . ID=gene-AL55_RS11065;Name=AL55_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11065;old_locus_tag=AL55_01085 NZ_KK316828.1 Protein Homology CDS 1162976 1164001 . - 0 ID=cds-WP_003405514.1;Parent=gene-AL55_RS11065;Dbxref=GenBank:WP_003405514.1;Name=WP_003405514.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215559.1;locus_tag=AL55_RS11065;product=S1 family peptidase;protein_id=WP_003405514.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1164248 1164871 . + . ID=gene-AL55_RS11070;Name=AL55_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11070;old_locus_tag=AL55_01086 NZ_KK316828.1 Protein Homology CDS 1164248 1164871 . + 0 ID=cds-WP_003405517.1;Parent=gene-AL55_RS11070;Dbxref=GenBank:WP_003405517.1;Name=WP_003405517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215560.1;locus_tag=AL55_RS11070;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_003405517.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1164868 1165736 . + . ID=gene-AL55_RS25735;Name=AL55_RS25735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25735;pseudo=true NZ_KK316828.1 Protein Homology CDS 1164868 1165736 . + 0 ID=cds-AL55_RS25735;Parent=gene-AL55_RS25735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215561.1;locus_tag=AL55_RS25735;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1166606 1167853 . + . ID=gene-AL55_RS11080;Name=AL55_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11080;old_locus_tag=AL55_01089 NZ_KK316828.1 Protein Homology CDS 1166606 1167853 . + 0 ID=cds-WP_003901078.1;Parent=gene-AL55_RS11080;Dbxref=GenBank:WP_003901078.1;Name=WP_003901078.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL55_RS11080;product=IS256-like element IS1081 family transposase;protein_id=WP_003901078.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1168221 1169336 . - . ID=gene-AL55_RS11085;Name=AL55_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11085;old_locus_tag=AL55_01090 NZ_KK316828.1 Protein Homology CDS 1168221 1169336 . - 0 ID=cds-WP_003901982.1;Parent=gene-AL55_RS11085;Dbxref=GenBank:WP_003901982.1;Name=WP_003901982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215564.1;locus_tag=AL55_RS11085;product=hypothetical protein;protein_id=WP_003901982.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1169293 1169496 . - . ID=gene-AL55_RS0104515;Name=AL55_RS0104515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104515 NZ_KK316828.1 Protein Homology CDS 1169293 1169496 . - 0 ID=cds-WP_003405585.1;Parent=gene-AL55_RS0104515;Dbxref=GenBank:WP_003405585.1;Name=WP_003405585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405585.1;locus_tag=AL55_RS0104515;product=hypothetical protein;protein_id=WP_003405585.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1169569 1170015 . + . ID=gene-AL55_RS11090;Name=AL55_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11090;old_locus_tag=AL55_01091 NZ_KK316828.1 Protein Homology CDS 1169569 1170015 . + 0 ID=cds-WP_003405595.1;Parent=gene-AL55_RS11090;Dbxref=GenBank:WP_003405595.1;Name=WP_003405595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215565.1;locus_tag=AL55_RS11090;product=oxidation-sensing regulator MosR;protein_id=WP_003405595.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1170064 1170969 . + . ID=gene-AL55_RS11095;Name=AL55_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11095;old_locus_tag=AL55_01092 NZ_KK316828.1 Protein Homology CDS 1170064 1170969 . + 0 ID=cds-WP_003405600.1;Parent=gene-AL55_RS11095;Dbxref=GenBank:WP_003405600.1;Name=WP_003405600.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215566.1;locus_tag=AL55_RS11095;product=SDR family oxidoreductase;protein_id=WP_003405600.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1171007 1171123 . - . ID=gene-AL55_RS28175;Name=AL55_RS28175;end_range=1171123,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28175;partial=true;pseudo=true;start_range=.,1171007 NZ_KK316828.1 Protein Homology CDS 1171007 1171123 . - 0 ID=cds-AL55_RS28175;Parent=gene-AL55_RS28175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1171123,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487708.1;locus_tag=AL55_RS28175;partial=true;product=EthD domain-containing protein;pseudo=true;start_range=.,1171007;transl_table=11 NZ_KK316828.1 RefSeq gene 1171128 1172078 . - . ID=gene-AL55_RS28180;Name=AL55_RS28180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28180;old_locus_tag=AL55_01093 NZ_KK316828.1 Protein Homology CDS 1171128 1172078 . - 0 ID=cds-WP_369810505.1;Parent=gene-AL55_RS28180;Dbxref=GenBank:WP_369810505.1;Name=WP_369810505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020419.6;locus_tag=AL55_RS28180;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_369810505.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1173044 1173295 . + . ID=gene-AL55_RS27455;Name=AL55_RS27455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27455 NZ_KK316828.1 GeneMarkS-2+ CDS 1173044 1173295 . + 0 ID=cds-WP_003898708.1;Parent=gene-AL55_RS27455;Dbxref=GenBank:WP_003898708.1;Name=WP_003898708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS27455;product=hypothetical protein;protein_id=WP_003898708.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1173458 1173685 . + . ID=gene-AL55_RS27460;Name=AL55_RS27460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27460 NZ_KK316828.1 Protein Homology CDS 1173458 1173685 . + 0 ID=cds-WP_234827446.1;Parent=gene-AL55_RS27460;Dbxref=GenBank:WP_234827446.1;Name=WP_234827446.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.6;locus_tag=AL55_RS27460;product=Fic family protein;protein_id=WP_234827446.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1174111 1174425 . + . ID=gene-AL55_RS11115;Name=AL55_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11115;old_locus_tag=AL55_01096 NZ_KK316828.1 Protein Homology CDS 1174111 1174425 . + 0 ID=cds-WP_003905442.1;Parent=gene-AL55_RS11115;Dbxref=GenBank:WP_003905442.1;Name=WP_003905442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003905442.1;locus_tag=AL55_RS11115;product=hypothetical protein;protein_id=WP_003905442.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1174356 1174556 . + . ID=gene-AL55_RS27630;Name=AL55_RS27630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27630;old_locus_tag=AL55_01097 NZ_KK316828.1 Protein Homology CDS 1174356 1174556 . + 0 ID=cds-WP_223695525.1;Parent=gene-AL55_RS27630;Dbxref=GenBank:WP_223695525.1;Name=WP_223695525.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=AL55_RS27630;product=site-specific integrase;protein_id=WP_223695525.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1174579 1174652 . + . ID=gene-AL55_RS11125;Name=AL55_RS11125;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS11125;old_locus_tag=AL55_01098 NZ_KK316828.1 tRNAscan-SE tRNA 1174579 1174652 . + . ID=rna-AL55_RS11125;Parent=gene-AL55_RS11125;anticodon=(pos:1174613..1174615);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS11125;product=tRNA-Leu NZ_KK316828.1 tRNAscan-SE exon 1174579 1174652 . + . ID=exon-AL55_RS11125-1;Parent=rna-AL55_RS11125;anticodon=(pos:1174613..1174615);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS11125;product=tRNA-Leu NZ_KK316828.1 RefSeq gene 1174811 1175575 . + . ID=gene-AL55_RS11130;Name=AL55_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11130;old_locus_tag=AL55_01099 NZ_KK316828.1 Protein Homology CDS 1174811 1175575 . + 0 ID=cds-WP_003900263.1;Parent=gene-AL55_RS11130;Dbxref=GenBank:WP_003900263.1;Name=WP_003900263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215572.1;locus_tag=AL55_RS11130;product=DUF427 domain-containing protein;protein_id=WP_003900263.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1175787 1175951 . - . ID=gene-AL55_RS28005;Name=AL55_RS28005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28005 NZ_KK316828.1 Protein Homology CDS 1175787 1175951 . - 0 ID=cds-WP_003898712.1;Parent=gene-AL55_RS28005;Dbxref=GenBank:WP_003898712.1;Name=WP_003898712.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014741.6;locus_tag=AL55_RS28005;product=DUF222 domain-containing protein;protein_id=WP_003898712.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1176579 1177760 . + . ID=gene-AL55_RS11135;Name=AL55_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11135;old_locus_tag=AL55_01100 NZ_KK316828.1 Protein Homology CDS 1176579 1177760 . + 0 ID=cds-WP_003405622.1;Parent=gene-AL55_RS11135;Dbxref=GenBank:WP_003405622.1;Name=WP_003405622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215573.1;locus_tag=AL55_RS11135;product=YncE family protein;protein_id=WP_003405622.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1177867 1179498 . + . ID=gene-AL55_RS11140;Name=AL55_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11140;old_locus_tag=AL55_01101 NZ_KK316828.1 Protein Homology CDS 1177867 1179498 . + 0 ID=cds-WP_003405625.1;Parent=gene-AL55_RS11140;Dbxref=GenBank:WP_003405625.1;Name=WP_003405625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215574.1;locus_tag=AL55_RS11140;product=long-chain fatty acid--CoA ligase;protein_id=WP_003405625.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1179574 1180638 . + . ID=gene-AL55_RS11145;Name=AL55_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11145;old_locus_tag=AL55_01102 NZ_KK316828.1 Protein Homology CDS 1179574 1180638 . + 0 ID=cds-WP_003405629.1;Parent=gene-AL55_RS11145;Dbxref=GenBank:WP_003405629.1;Name=WP_003405629.1;Ontology_term=GO:0016638;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215575.1;locus_tag=AL55_RS11145;product=NAD(P)H-dependent amine dehydrogenase family protein;protein_id=WP_003405629.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1180691 1181164 . + . ID=gene-AL55_RS11150;Name=AL55_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11150;old_locus_tag=AL55_01103 NZ_KK316828.1 Protein Homology CDS 1180691 1181164 . + 0 ID=cds-WP_003405633.1;Parent=gene-AL55_RS11150;Dbxref=GenBank:WP_003405633.1;Name=WP_003405633.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215576.1;locus_tag=AL55_RS11150;product=SRPBCC family protein;protein_id=WP_003405633.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1181198 1182061 . + . ID=gene-AL55_RS11155;Name=AL55_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11155;old_locus_tag=AL55_01104 NZ_KK316828.1 Protein Homology CDS 1181198 1182061 . + 0 ID=cds-WP_003405636.1;Parent=gene-AL55_RS11155;Dbxref=GenBank:WP_003405636.1;Name=WP_003405636.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215577.1;locus_tag=AL55_RS11155;product=class II glutamine amidotransferase;protein_id=WP_003405636.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1182066 1182923 . + . ID=gene-AL55_RS11160;Name=AL55_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11160;old_locus_tag=AL55_01105 NZ_KK316828.1 Protein Homology CDS 1182066 1182923 . + 0 ID=cds-WP_003405640.1;Parent=gene-AL55_RS11160;Dbxref=GenBank:WP_003405640.1;Name=WP_003405640.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215578.1;locus_tag=AL55_RS11160;product=patatin-like phospholipase family protein;protein_id=WP_003405640.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1182924 1184006 . - . ID=gene-AL55_RS11165;Name=AL55_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11165;old_locus_tag=AL55_01106 NZ_KK316828.1 Protein Homology CDS 1182924 1184006 . - 0 ID=cds-WP_003405642.1;Parent=gene-AL55_RS11165;Dbxref=GenBank:WP_003405642.1;Name=WP_003405642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215579.1;locus_tag=AL55_RS11165;product=patatin family protein;protein_id=WP_003405642.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1184087 1184506 . - . ID=gene-AL55_RS11170;Name=lpqV;gbkey=Gene;gene=lpqV;gene_biotype=protein_coding;locus_tag=AL55_RS11170;old_locus_tag=AL55_01107 NZ_KK316828.1 Protein Homology CDS 1184087 1184506 . - 0 ID=cds-WP_003405645.1;Parent=gene-AL55_RS11170;Dbxref=GenBank:WP_003405645.1;Name=WP_003405645.1;gbkey=CDS;gene=lpqV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215580.1;locus_tag=AL55_RS11170;product=lipoprotein LpqV;protein_id=WP_003405645.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1184618 1185184 . + . ID=gene-AL55_RS11175;Name=AL55_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11175;old_locus_tag=AL55_01108 NZ_KK316828.1 Protein Homology CDS 1184618 1185184 . + 0 ID=cds-WP_003405649.1;Parent=gene-AL55_RS11175;Dbxref=GenBank:WP_003405649.1;Name=WP_003405649.1;Ontology_term=GO:0008198,GO:0017172;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,cysteine dioxygenase activity|0017172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215581.1;locus_tag=AL55_RS11175;product=cysteine dioxygenase;protein_id=WP_003405649.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1185181 1185576 . + . ID=gene-AL55_RS11180;Name=AL55_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11180;old_locus_tag=AL55_01109 NZ_KK316828.1 Protein Homology CDS 1185181 1185576 . + 0 ID=cds-WP_003405651.1;Parent=gene-AL55_RS11180;Dbxref=GenBank:WP_003405651.1;Name=WP_003405651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215582.1;locus_tag=AL55_RS11180;product=rhodanese-like domain-containing protein;protein_id=WP_003405651.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1185604 1187625 . - . ID=gene-AL55_RS11185;Name=AL55_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11185;old_locus_tag=AL55_01110 NZ_KK316828.1 Protein Homology CDS 1185604 1187625 . - 0 ID=cds-WP_016330390.1;Parent=gene-AL55_RS11185;Dbxref=GenBank:WP_016330390.1;Name=WP_016330390.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177780.1;locus_tag=AL55_RS11185;product=PE family protein;protein_id=WP_016330390.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1187958 1189496 . - . ID=gene-AL55_RS11190;Name=AL55_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11190;old_locus_tag=AL55_01111 NZ_KK316828.1 Protein Homology CDS 1187958 1189496 . - 0 ID=cds-WP_031660269.1;Parent=gene-AL55_RS11190;Dbxref=GenBank:WP_031660269.1;Name=WP_031660269.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177781.1;locus_tag=AL55_RS11190;product=PE family protein;protein_id=WP_031660269.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1189858 1191621 . - . ID=gene-AL55_RS11195;Name=AL55_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11195;old_locus_tag=AL55_01112 NZ_KK316828.1 Protein Homology CDS 1189858 1191621 . - 0 ID=cds-WP_003405708.1;Parent=gene-AL55_RS11195;Dbxref=GenBank:WP_003405708.1;Name=WP_003405708.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215585.1;locus_tag=AL55_RS11195;product=alpha/beta hydrolase;protein_id=WP_003405708.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1191618 1192391 . - . ID=gene-AL55_RS11200;Name=AL55_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11200;old_locus_tag=AL55_01113 NZ_KK316828.1 Protein Homology CDS 1191618 1192391 . - 0 ID=cds-WP_003405712.1;Parent=gene-AL55_RS11200;Dbxref=GenBank:WP_003405712.1;Name=WP_003405712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215586.1;locus_tag=AL55_RS11200;product=enoyl-CoA hydratase;protein_id=WP_003405712.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1192403 1193440 . - . ID=gene-AL55_RS11205;Name=AL55_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11205;old_locus_tag=AL55_01114 NZ_KK316828.1 Protein Homology CDS 1192403 1193440 . - 0 ID=cds-WP_003405716.1;Parent=gene-AL55_RS11205;Dbxref=GenBank:WP_003405716.1;Name=WP_003405716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215587.1;locus_tag=AL55_RS11205;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_003405716.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1193627 1194463 . + . ID=gene-AL55_RS11210;Name=AL55_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11210;old_locus_tag=AL55_01115 NZ_KK316828.1 Protein Homology CDS 1193627 1194463 . + 0 ID=cds-WP_003405719.1;Parent=gene-AL55_RS11210;Dbxref=GenBank:WP_003405719.1;Name=WP_003405719.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215588.1;locus_tag=AL55_RS11210;product=Bax inhibitor-1/YccA family protein;protein_id=WP_003405719.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1194579 1195430 . + . ID=gene-AL55_RS11215;Name=AL55_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11215;old_locus_tag=AL55_01116 NZ_KK316828.1 Protein Homology CDS 1194579 1195430 . + 0 ID=cds-WP_003405722.1;Parent=gene-AL55_RS11215;Dbxref=GenBank:WP_003405722.1;Name=WP_003405722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215589.1;locus_tag=AL55_RS11215;product=hypothetical protein;protein_id=WP_003405722.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1195504 1196721 . - . ID=gene-AL55_RS11220;Name=AL55_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11220;old_locus_tag=AL55_01117 NZ_KK316828.1 Protein Homology CDS 1195504 1196721 . - 0 ID=cds-WP_003405724.1;Parent=gene-AL55_RS11220;Dbxref=GenBank:WP_003405724.1;Name=WP_003405724.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215590.1;locus_tag=AL55_RS11220;product=acetyl-CoA C-acetyltransferase;protein_id=WP_003405724.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1196774 1197718 . - . ID=gene-AL55_RS11225;Name=AL55_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11225;old_locus_tag=AL55_01118 NZ_KK316828.1 Protein Homology CDS 1196774 1197718 . - 0 ID=cds-WP_003405726.1;Parent=gene-AL55_RS11225;Dbxref=GenBank:WP_003405726.1;Name=WP_003405726.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215591.1;locus_tag=AL55_RS11225;product=SGNH/GDSL hydrolase family protein;protein_id=WP_003405726.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1197941 1199008 . + . ID=gene-AL55_RS11230;Name=lipU;gbkey=Gene;gene=lipU;gene_biotype=protein_coding;locus_tag=AL55_RS11230;old_locus_tag=AL55_01119 NZ_KK316828.1 Protein Homology CDS 1197941 1199008 . + 0 ID=cds-WP_003918181.1;Parent=gene-AL55_RS11230;Dbxref=GenBank:WP_003918181.1;Name=WP_003918181.1;gbkey=CDS;gene=lipU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918181.1;locus_tag=AL55_RS11230;product=lipase LipU;protein_id=WP_003918181.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1199065 1200459 . + . ID=gene-AL55_RS11235;Name=cbs;gbkey=Gene;gene=cbs;gene_biotype=protein_coding;locus_tag=AL55_RS11235;old_locus_tag=AL55_01120 NZ_KK316828.1 Protein Homology CDS 1199065 1200459 . + 0 ID=cds-WP_003405730.1;Parent=gene-AL55_RS11235;Dbxref=GenBank:WP_003405730.1;Name=WP_003405730.1;Ontology_term=GO:0019343,GO:0004122,GO:0005737;gbkey=CDS;gene=cbs;go_component=cytoplasm|0005737||IEA;go_function=cystathionine beta-synthase activity|0004122||IEA;go_process=cysteine biosynthetic process via cystathionine|0019343||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177782.1;locus_tag=AL55_RS11235;product=cystathionine beta-synthase;protein_id=WP_003405730.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1200661 1201383 . + . ID=gene-AL55_RS11240;Name=pra;gbkey=Gene;gene=pra;gene_biotype=protein_coding;locus_tag=AL55_RS11240;old_locus_tag=AL55_01121 NZ_KK316828.1 Protein Homology CDS 1200661 1201383 . + 0 ID=cds-WP_003901991.1;Parent=gene-AL55_RS11240;Dbxref=GenBank:WP_003901991.1;Name=WP_003901991.1;Ontology_term=GO:0005886;gbkey=CDS;gene=pra;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215594.1;locus_tag=AL55_RS11240;product=RDD family protein;protein_id=WP_003901991.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1201415 1202581 . + . ID=gene-AL55_RS11245;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=AL55_RS11245;old_locus_tag=AL55_01122 NZ_KK316828.1 Protein Homology CDS 1201415 1202581 . + 0 ID=cds-WP_003405736.1;Parent=gene-AL55_RS11245;Dbxref=GenBank:WP_003405736.1;Name=WP_003405736.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;gene=metB;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215595.1;locus_tag=AL55_RS11245;product=cystathionine gamma-synthase;protein_id=WP_003405736.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1202652 1203146 . - . ID=gene-AL55_RS11250;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AL55_RS11250;old_locus_tag=AL55_01123 NZ_KK316828.1 Protein Homology CDS 1202652 1203146 . - 0 ID=cds-WP_003405742.1;Parent=gene-AL55_RS11250;Dbxref=GenBank:WP_003405742.1;Name=WP_003405742.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908869.1;locus_tag=AL55_RS11250;product=transcription elongation factor GreA;protein_id=WP_003405742.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1203332 1203766 . - . ID=gene-AL55_RS11255;Name=AL55_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11255;old_locus_tag=AL55_01124 NZ_KK316828.1 Protein Homology CDS 1203332 1203766 . - 0 ID=cds-WP_003405744.1;Parent=gene-AL55_RS11255;Dbxref=GenBank:WP_003405744.1;Name=WP_003405744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215597.1;locus_tag=AL55_RS11255;product=DUF4307 domain-containing protein;protein_id=WP_003405744.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1203868 1204734 . + . ID=gene-AL55_RS11260;Name=mca;gbkey=Gene;gene=mca;gene_biotype=protein_coding;locus_tag=AL55_RS11260;old_locus_tag=AL55_01125 NZ_KK316828.1 Protein Homology CDS 1203868 1204734 . + 0 ID=cds-WP_003405746.1;Parent=gene-AL55_RS11260;Dbxref=GenBank:WP_003405746.1;Name=WP_003405746.1;Ontology_term=GO:0010126;gbkey=CDS;gene=mca;go_process=mycothiol metabolic process|0010126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215598.1;locus_tag=AL55_RS11260;product=mycothiol conjugate amidase Mca;protein_id=WP_003405746.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1204731 1204997 . + . ID=gene-AL55_RS11265;Name=AL55_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11265;old_locus_tag=AL55_01126 NZ_KK316828.1 Protein Homology CDS 1204731 1204997 . + 0 ID=cds-WP_003405749.1;Parent=gene-AL55_RS11265;Dbxref=GenBank:WP_003405749.1;Name=WP_003405749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215599.1;locus_tag=AL55_RS11265;product=hypothetical protein;protein_id=WP_003405749.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1204984 1207005 . + . ID=gene-AL55_RS11270;Name=AL55_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11270;old_locus_tag=AL55_01127 NZ_KK316828.1 Protein Homology CDS 1204984 1207005 . + 0 ID=cds-WP_003405750.1;Parent=gene-AL55_RS11270;Dbxref=GenBank:WP_003405750.1;Name=WP_003405750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215600.1;locus_tag=AL55_RS11270;product=thioredoxin domain-containing protein;protein_id=WP_003405750.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1207104 1207832 . - . ID=gene-AL55_RS11275;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=AL55_RS11275;old_locus_tag=AL55_01128 NZ_KK316828.1 Protein Homology CDS 1207104 1207832 . - 0 ID=cds-WP_003901993.1;Parent=gene-AL55_RS11275;Dbxref=GenBank:WP_003901993.1;Name=WP_003901993.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215601.1;locus_tag=AL55_RS11275;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_003901993.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1207943 1208731 . + . ID=gene-AL55_RS11280;Name=AL55_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11280;old_locus_tag=AL55_01129 NZ_KK316828.1 Protein Homology CDS 1207943 1208731 . + 0 ID=cds-WP_003903314.1;Parent=gene-AL55_RS11280;Dbxref=GenBank:WP_003903314.1;Name=WP_003903314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215602.1;locus_tag=AL55_RS11280;product=(2Z%2C6E)-farnesyl diphosphate synthase;protein_id=WP_003903314.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1208908 1211208 . + . ID=gene-AL55_RS11285;Name=AL55_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11285;old_locus_tag=AL55_01130 NZ_KK316828.1 Protein Homology CDS 1208908 1211208 . + 0 ID=cds-WP_016330392.1;Parent=gene-AL55_RS11285;Dbxref=GenBank:WP_016330392.1;Name=WP_016330392.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177783.1;locus_tag=AL55_RS11285;product=PE family protein;protein_id=WP_016330392.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1211415 1211705 . + . ID=gene-AL55_RS28185;Name=AL55_RS28185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28185;old_locus_tag=AL55_01131;partial=true;pseudo=true;start_range=.,1211415 NZ_KK316828.1 Protein Homology CDS 1211415 1211705 . + 0 ID=cds-AL55_RS28185;Parent=gene-AL55_RS28185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878551.1;locus_tag=AL55_RS28185;partial=true;product=undecaprenyl diphosphate synthase family protein;pseudo=true;start_range=.,1211415;transl_table=11 NZ_KK316828.1 RefSeq gene 1211858 1212292 . + . ID=gene-AL55_RS28190;Name=AL55_RS28190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28190;old_locus_tag=AL55_01132 NZ_KK316828.1 Protein Homology CDS 1211858 1212292 . + 0 ID=cds-WP_003900271.1;Parent=gene-AL55_RS28190;Dbxref=GenBank:WP_003900271.1;Name=WP_003900271.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585063.1;locus_tag=AL55_RS28190;product=PE family protein;protein_id=WP_003900271.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1212309 1212557 . + . ID=gene-AL55_RS0104540;Name=AL55_RS0104540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104540 NZ_KK316828.1 Protein Homology CDS 1212309 1212557 . + 0 ID=cds-WP_003901996.1;Parent=gene-AL55_RS0104540;Dbxref=GenBank:WP_003901996.1;Name=WP_003901996.1;Ontology_term=GO:0005975,GO:0004553,GO:0030246;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012762.6;locus_tag=AL55_RS0104540;product=cellulose binding domain-containing protein;protein_id=WP_003901996.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1212569 1212751 . + . ID=gene-AL55_RS0104545;Name=AL55_RS0104545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104545 NZ_KK316828.1 Protein Homology CDS 1212569 1212751 . + 0 ID=cds-WP_003898724.1;Parent=gene-AL55_RS0104545;Dbxref=GenBank:WP_003898724.1;Name=WP_003898724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030029.1;locus_tag=AL55_RS0104545;product=hypothetical protein;protein_id=WP_003898724.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1212861 1212965 . + . ID=gene-AL55_RS27645;Name=AL55_RS27645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27645;old_locus_tag=AL55_01134 NZ_KK316828.1 Protein Homology CDS 1212861 1212965 . + 0 ID=cds-WP_003405770.1;Parent=gene-AL55_RS27645;Dbxref=GenBank:WP_003405770.1;Name=WP_003405770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405770.1;locus_tag=AL55_RS27645;product=endo-1%2C4-beta-glucanase;protein_id=WP_003405770.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1212943 1213398 . + . ID=gene-AL55_RS11305;Name=AL55_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11305;old_locus_tag=AL55_01135 NZ_KK316828.1 Protein Homology CDS 1212943 1213398 . + 0 ID=cds-WP_003905452.1;Parent=gene-AL55_RS11305;Dbxref=GenBank:WP_003905452.1;Name=WP_003905452.1;Ontology_term=GO:0000272,GO:0008810;gbkey=CDS;go_function=cellulase activity|0008810||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627137.1;locus_tag=AL55_RS11305;product=GH12 family glycosyl hydrolase domain-containing protein;protein_id=WP_003905452.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1213813 1216374 . + . ID=gene-AL55_RS11310;Name=AL55_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11310;old_locus_tag=AL55_01136 NZ_KK316828.1 Protein Homology CDS 1213813 1216374 . + 0 ID=cds-WP_014585135.1;Parent=gene-AL55_RS11310;Dbxref=GenBank:WP_014585135.1;Name=WP_014585135.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177786.1;locus_tag=AL55_RS11310;product=PE family protein;protein_id=WP_014585135.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1216592 1217530 . - . ID=gene-AL55_RS11315;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AL55_RS11315;old_locus_tag=AL55_01137 NZ_KK316828.1 Protein Homology CDS 1216592 1217530 . - 0 ID=cds-WP_003405790.1;Parent=gene-AL55_RS11315;Dbxref=GenBank:WP_003405790.1;Name=WP_003405790.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875370.1;locus_tag=AL55_RS11315;product=type I pantothenate kinase;protein_id=WP_003405790.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1217918 1219198 . + . ID=gene-AL55_RS11320;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AL55_RS11320;old_locus_tag=AL55_01138 NZ_KK316828.1 Protein Homology CDS 1217918 1219198 . + 0 ID=cds-WP_003405797.1;Parent=gene-AL55_RS11320;Dbxref=GenBank:WP_003405797.1;Name=WP_003405797.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177787.3;locus_tag=AL55_RS11320;product=serine hydroxymethyltransferase;protein_id=WP_003405797.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1219303 1220130 . + . ID=gene-AL55_RS11325;Name=AL55_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11325;old_locus_tag=AL55_01139 NZ_KK316828.1 Protein Homology CDS 1219303 1220130 . + 0 ID=cds-WP_003405801.1;Parent=gene-AL55_RS11325;Dbxref=GenBank:WP_003405801.1;Name=WP_003405801.1;Ontology_term=GO:0006631,GO:0045300;gbkey=CDS;go_function=stearoyl-[ACP] desaturase activity|0045300||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215610.1;locus_tag=AL55_RS11325;product=acyl-ACP desaturase;protein_id=WP_003405801.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1220341 1221642 . + . ID=gene-AL55_RS11330;Name=AL55_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11330;old_locus_tag=AL55_01140 NZ_KK316828.1 Protein Homology CDS 1220341 1221642 . + 0 ID=cds-WP_003405802.1;Parent=gene-AL55_RS11330;Dbxref=GenBank:WP_003405802.1;Name=WP_003405802.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215611.1;locus_tag=AL55_RS11330;product=PhoH family protein;protein_id=WP_003405802.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1221729 1222604 . + . ID=gene-AL55_RS11335;Name=AL55_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11335;old_locus_tag=AL55_01141 NZ_KK316828.1 Protein Homology CDS 1221729 1222604 . + 0 ID=cds-WP_003898725.1;Parent=gene-AL55_RS11335;Dbxref=GenBank:WP_003898725.1;Name=WP_003898725.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215612.1;locus_tag=AL55_RS11335;product=polysaccharide deacetylase family protein;protein_id=WP_003898725.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1222607 1223488 . - . ID=gene-AL55_RS11340;Name=AL55_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11340;old_locus_tag=AL55_01142 NZ_KK316828.1 Protein Homology CDS 1222607 1223488 . - 0 ID=cds-WP_003405804.1;Parent=gene-AL55_RS11340;Dbxref=GenBank:WP_003405804.1;Name=WP_003405804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215613.1;locus_tag=AL55_RS11340;product=hypothetical protein;protein_id=WP_003405804.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1223485 1224909 . - . ID=gene-AL55_RS11345;Name=fum;gbkey=Gene;gene=fum;gene_biotype=protein_coding;locus_tag=AL55_RS11345;old_locus_tag=AL55_01143 NZ_KK316828.1 Protein Homology CDS 1223485 1224909 . - 0 ID=cds-WP_003405805.1;Parent=gene-AL55_RS11345;Dbxref=GenBank:WP_003405805.1;Name=WP_003405805.1;Ontology_term=GO:0006099,GO:0006106,GO:0006108,GO:0004333;gbkey=CDS;gene=fum;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,fumarate metabolic process|0006106||IEA,malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215614.1;locus_tag=AL55_RS11345;product=class II fumarate hydratase;protein_id=WP_003405805.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1224940 1226028 . - . ID=gene-AL55_RS11350;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AL55_RS11350;old_locus_tag=AL55_01144 NZ_KK316828.1 Protein Homology CDS 1224940 1226028 . - 0 ID=cds-WP_003898726.1;Parent=gene-AL55_RS11350;Dbxref=GenBank:WP_003898726.1;Name=WP_003898726.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215615.3;locus_tag=AL55_RS11350;product=class II fructose-bisphosphatase;protein_id=WP_003898726.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1226084 1226728 . + . ID=gene-AL55_RS11355;Name=AL55_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11355;old_locus_tag=AL55_01145 NZ_KK316828.1 Protein Homology CDS 1226084 1226728 . + 0 ID=cds-WP_003915494.1;Parent=gene-AL55_RS11355;Dbxref=GenBank:WP_003915494.1;Name=WP_003915494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915494.1;locus_tag=AL55_RS11355;product=DUF4245 domain-containing protein;protein_id=WP_003915494.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1226735 1227892 . - . ID=gene-AL55_RS11360;Name=AL55_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11360;old_locus_tag=AL55_01146 NZ_KK316828.1 Protein Homology CDS 1226735 1227892 . - 0 ID=cds-WP_003898727.1;Parent=gene-AL55_RS11360;Dbxref=GenBank:WP_003898727.1;Name=WP_003898727.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215617.1;locus_tag=AL55_RS11360;product=AI-2E family transporter;protein_id=WP_003898727.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1228004 1228315 . - . ID=gene-AL55_RS11365;Name=mazF3;gbkey=Gene;gene=mazF3;gene_biotype=protein_coding;gene_synonym=mazF-mt6;locus_tag=AL55_RS11365;old_locus_tag=AL55_01147 NZ_KK316828.1 Protein Homology CDS 1228004 1228315 . - 0 ID=cds-WP_003405820.1;Parent=gene-AL55_RS11365;Dbxref=GenBank:WP_003405820.1;Name=WP_003405820.1;gbkey=CDS;gene=mazF3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215618.1;locus_tag=AL55_RS11365;product=type II toxin-antitoxin system toxin endoribonuclease MazF3;protein_id=WP_003405820.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1228315 1228635 . - . ID=gene-AL55_RS11370;Name=mazE3;gbkey=Gene;gene=mazE3;gene_biotype=protein_coding;locus_tag=AL55_RS11370;old_locus_tag=AL55_01148 NZ_KK316828.1 Protein Homology CDS 1228315 1228635 . - 0 ID=cds-WP_003405836.1;Parent=gene-AL55_RS11370;Dbxref=GenBank:WP_003405836.1;Name=WP_003405836.1;gbkey=CDS;gene=mazE3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405836.1;locus_tag=AL55_RS11370;product=type II toxin-antitoxin system antitoxin MazE3;protein_id=WP_003405836.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1228645 1230181 . + . ID=gene-AL55_RS25765;Name=AL55_RS25765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25765;pseudo=true NZ_KK316828.1 Protein Homology CDS 1228645 1230181 . + 0 ID=cds-AL55_RS25765;Parent=gene-AL55_RS25765;Note=frameshifted;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011724013.1;locus_tag=AL55_RS25765;product=carboxylesterase/lipase family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1230188 1231300 . - . ID=gene-AL55_RS11385;Name=AL55_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11385;old_locus_tag=AL55_01151 NZ_KK316828.1 Protein Homology CDS 1230188 1231300 . - 0 ID=cds-WP_003405840.1;Parent=gene-AL55_RS11385;Dbxref=GenBank:WP_003405840.1;Name=WP_003405840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215622.1;locus_tag=AL55_RS11385;product=3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase;protein_id=WP_003405840.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1231310 1231567 . - . ID=gene-AL55_RS11390;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=AL55_RS11390;old_locus_tag=AL55_01152 NZ_KK316828.1 Protein Homology CDS 1231310 1231567 . - 0 ID=cds-WP_003405844.1;Parent=gene-AL55_RS11390;Dbxref=GenBank:WP_003405844.1;Name=WP_003405844.1;Ontology_term=GO:0006308,GO:0008855;gbkey=CDS;gene=xseB;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215623.1;locus_tag=AL55_RS11390;product=exodeoxyribonuclease VII small subunit;protein_id=WP_003405844.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1231557 1232804 . - . ID=gene-AL55_RS11395;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AL55_RS11395;old_locus_tag=AL55_01153 NZ_KK316828.1 Protein Homology CDS 1231557 1232804 . - 0 ID=cds-WP_003405846.1;Parent=gene-AL55_RS11395;Dbxref=GenBank:WP_003405846.1;Name=WP_003405846.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215624.1;locus_tag=AL55_RS11395;product=exodeoxyribonuclease VII large subunit;protein_id=WP_003405846.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1232801 1233439 . - . ID=gene-AL55_RS11400;Name=AL55_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11400;old_locus_tag=AL55_01154 NZ_KK316828.1 Protein Homology CDS 1232801 1233439 . - 0 ID=cds-WP_003898730.1;Parent=gene-AL55_RS11400;Dbxref=GenBank:WP_003898730.1;Name=WP_003898730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215625.1;locus_tag=AL55_RS11400;product=lipid droplet-associated protein;protein_id=WP_003898730.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1233529 1234536 . + . ID=gene-AL55_RS11405;Name=AL55_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11405;old_locus_tag=AL55_01155 NZ_KK316828.1 Protein Homology CDS 1233529 1234536 . + 0 ID=cds-WP_003405853.1;Parent=gene-AL55_RS11405;Dbxref=GenBank:WP_003405853.1;Name=WP_003405853.1;Ontology_term=GO:0019288,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177788.1;locus_tag=AL55_RS11405;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_003405853.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1234553 1235536 . - . ID=gene-AL55_RS11410;Name=AL55_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11410;old_locus_tag=AL55_01156 NZ_KK316828.1 Protein Homology CDS 1234553 1235536 . - 0 ID=cds-WP_003898731.1;Parent=gene-AL55_RS11410;Dbxref=GenBank:WP_003898731.1;Name=WP_003898731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215627.2;locus_tag=AL55_RS11410;product=DUF6542 domain-containing protein;protein_id=WP_003898731.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1235599 1236672 . + . ID=gene-AL55_RS11415;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AL55_RS11415;old_locus_tag=AL55_01157 NZ_KK316828.1 Protein Homology CDS 1235599 1236672 . + 0 ID=cds-WP_003898732.1;Parent=gene-AL55_RS11415;Dbxref=GenBank:WP_003898732.1;Name=WP_003898732.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215628.1;locus_tag=AL55_RS11415;product=redox-regulated ATPase YchF;protein_id=WP_003898732.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1236760 1236957 . + . ID=gene-AL55_RS11420;Name=AL55_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11420;old_locus_tag=AL55_01158 NZ_KK316828.1 Protein Homology CDS 1236760 1236957 . + 0 ID=cds-WP_003405863.1;Parent=gene-AL55_RS11420;Dbxref=GenBank:WP_003405863.1;Name=WP_003405863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215629.1;locus_tag=AL55_RS11420;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003405863.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1236954 1237328 . + . ID=gene-AL55_RS11425;Name=AL55_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11425;old_locus_tag=AL55_01159 NZ_KK316828.1 Protein Homology CDS 1236954 1237328 . + 0 ID=cds-WP_003405865.1;Parent=gene-AL55_RS11425;Dbxref=GenBank:WP_003405865.1;Name=WP_003405865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215630.1;locus_tag=AL55_RS11425;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003405865.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1237531 1238229 . + . ID=gene-AL55_RS11430;Name=AL55_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11430;old_locus_tag=AL55_01160 NZ_KK316828.1 Protein Homology CDS 1237531 1238229 . + 0 ID=cds-WP_003898733.1;Parent=gene-AL55_RS11430;Dbxref=GenBank:WP_003898733.1;Name=WP_003898733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215631.1;locus_tag=AL55_RS11430;product=hypothetical protein;protein_id=WP_003898733.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1238347 1238532 . + . ID=gene-AL55_RS11435;Name=AL55_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11435;old_locus_tag=AL55_01161 NZ_KK316828.1 Protein Homology CDS 1238347 1238532 . + 0 ID=cds-WP_003901093.1;Parent=gene-AL55_RS11435;Dbxref=GenBank:WP_003901093.1;Name=WP_003901093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215632.1;locus_tag=AL55_RS11435;product=hypothetical protein;protein_id=WP_003901093.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1238459 1238734 . - . ID=gene-AL55_RS11440;Name=AL55_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11440;old_locus_tag=AL55_01162 NZ_KK316828.1 Protein Homology CDS 1238459 1238734 . - 0 ID=cds-WP_003405867.1;Parent=gene-AL55_RS11440;Dbxref=GenBank:WP_003405867.1;Name=WP_003405867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627157.1;locus_tag=AL55_RS11440;product=hypothetical protein;protein_id=WP_003405867.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1238977 1239300 . + . ID=gene-AL55_RS11445;Name=AL55_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11445;old_locus_tag=AL55_01163 NZ_KK316828.1 Protein Homology CDS 1238977 1239300 . + 0 ID=cds-WP_003405871.1;Parent=gene-AL55_RS11445;Dbxref=GenBank:WP_003405871.1;Name=WP_003405871.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215633.1;locus_tag=AL55_RS11445;product=putative quinol monooxygenase;protein_id=WP_003405871.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1239315 1240025 . - . ID=gene-AL55_RS11450;Name=AL55_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11450;old_locus_tag=AL55_01164 NZ_KK316828.1 Protein Homology CDS 1239315 1240025 . - 0 ID=cds-WP_003911399.1;Parent=gene-AL55_RS11450;Dbxref=GenBank:WP_003911399.1;Name=WP_003911399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013828012.1;locus_tag=AL55_RS11450;product=hypothetical protein;protein_id=WP_003911399.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1240047 1240256 . + . ID=gene-AL55_RS27240;Name=AL55_RS27240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27240 NZ_KK316828.1 Protein Homology CDS 1240047 1240256 . + 0 ID=cds-WP_003911400.1;Parent=gene-AL55_RS27240;Dbxref=GenBank:WP_003911400.1;Name=WP_003911400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016706054.1;locus_tag=AL55_RS27240;product=hypothetical protein;protein_id=WP_003911400.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1240208 1240978 . - . ID=gene-AL55_RS11460;Name=AL55_RS11460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS11460;old_locus_tag=AL55_01166;pseudo=true NZ_KK316828.1 Protein Homology CDS 1240208 1240978 . - 0 ID=cds-AL55_RS11460;Parent=gene-AL55_RS11460;Note=frameshifted;Ontology_term=GO:0009190,GO:0035556,GO:0009975,GO:0016849,GO:0032555,GO:0046872;gbkey=CDS;go_function=cyclase activity|0009975||IEA,phosphorus-oxygen lyase activity|0016849||IEA,purine ribonucleotide binding|0032555||IEA,metal ion binding|0046872||IEA;go_process=cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020729832.1;locus_tag=AL55_RS11460;product=adenylate/guanylate cyclase domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1241051 1242451 . + . ID=gene-AL55_RS11465;Name=AL55_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11465;old_locus_tag=AL55_01167 NZ_KK316828.1 Protein Homology CDS 1241051 1242451 . + 0 ID=cds-WP_003898735.1;Parent=gene-AL55_RS11465;Dbxref=GenBank:WP_003898735.1;Name=WP_003898735.1;Ontology_term=GO:0006006,GO:0004345;gbkey=CDS;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177789.1;locus_tag=AL55_RS11465;product=glucose-6-phosphate dehydrogenase;protein_id=WP_003898735.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1242473 1243495 . + . ID=gene-AL55_RS11470;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=AL55_RS11470;old_locus_tag=AL55_01168 NZ_KK316828.1 Protein Homology CDS 1242473 1243495 . + 0 ID=cds-WP_003405880.1;Parent=gene-AL55_RS11470;Dbxref=GenBank:WP_003405880.1;Name=WP_003405880.1;Ontology_term=GO:0006098,GO:0016616;gbkey=CDS;gene=gnd;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215638.1;locus_tag=AL55_RS11470;product=phosphogluconate dehydrogenase (NAD(+)-dependent%2C decarboxylating);protein_id=WP_003405880.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1243488 1244354 . - . ID=gene-AL55_RS11475;Name=bpoB;gbkey=Gene;gene=bpoB;gene_biotype=protein_coding;locus_tag=AL55_RS11475;old_locus_tag=AL55_01169 NZ_KK316828.1 Protein Homology CDS 1243488 1244354 . - 0 ID=cds-WP_003898736.1;Parent=gene-AL55_RS11475;Dbxref=GenBank:WP_003898736.1;Name=WP_003898736.1;gbkey=CDS;gene=bpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898736.1;locus_tag=AL55_RS11475;product=alpha/beta fold hydrolase;protein_id=WP_003898736.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1244516 1245421 . + . ID=gene-AL55_RS11480;Name=ephC;gbkey=Gene;gene=ephC;gene_biotype=protein_coding;locus_tag=AL55_RS11480;old_locus_tag=AL55_01170 NZ_KK316828.1 Protein Homology CDS 1244516 1245421 . + 0 ID=cds-WP_003911402.1;Parent=gene-AL55_RS11480;Dbxref=GenBank:WP_003911402.1;Name=WP_003911402.1;gbkey=CDS;gene=ephC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911402.1;locus_tag=AL55_RS11480;product=alpha/beta fold hydrolase;protein_id=WP_003911402.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1245426 1246670 . + . ID=gene-AL55_RS11485;Name=AL55_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11485;old_locus_tag=AL55_01171 NZ_KK316828.1 Protein Homology CDS 1245426 1246670 . + 0 ID=cds-WP_003901095.1;Parent=gene-AL55_RS11485;Dbxref=GenBank:WP_003901095.1;Name=WP_003901095.1;Ontology_term=GO:0004144;gbkey=CDS;go_function=diacylglycerol O-acyltransferase activity|0004144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215641.1;locus_tag=AL55_RS11485;product=WS/DGAT domain-containing protein;protein_id=WP_003901095.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1246674 1247279 . - . ID=gene-AL55_RS11490;Name=AL55_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11490;old_locus_tag=AL55_01172 NZ_KK316828.1 Protein Homology CDS 1246674 1247279 . - 0 ID=cds-WP_003405892.1;Parent=gene-AL55_RS11490;Dbxref=GenBank:WP_003405892.1;Name=WP_003405892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215642.1;locus_tag=AL55_RS11490;product=hypothetical protein;protein_id=WP_003405892.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1247276 1248748 . - . ID=gene-AL55_RS11495;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=AL55_RS11495;old_locus_tag=AL55_01173 NZ_KK316828.1 Protein Homology CDS 1247276 1248748 . - 0 ID=cds-WP_003898737.1;Parent=gene-AL55_RS11495;Dbxref=GenBank:WP_003898737.1;Name=WP_003898737.1;gbkey=CDS;gene=ppdK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215643.1;locus_tag=AL55_RS11495;product=pyruvate%2C phosphate dikinase;protein_id=WP_003898737.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1248961 1250315 . - . ID=gene-AL55_RS0104560;Name=AL55_RS0104560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0104560;old_locus_tag=AL55_01174;pseudo=true NZ_KK316828.1 Protein Homology CDS 1248961 1250315 . - 0 ID=cds-AL55_RS0104560;Parent=gene-AL55_RS0104560;Note=frameshifted;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF014741.6;locus_tag=AL55_RS0104560;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1250417 1251877 . - . ID=gene-AL55_RS11500;Name=AL55_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11500;old_locus_tag=AL55_01175 NZ_KK316828.1 Protein Homology CDS 1250417 1251877 . - 0 ID=cds-WP_003405904.1;Parent=gene-AL55_RS11500;Dbxref=GenBank:WP_003405904.1;Name=WP_003405904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215645.1;locus_tag=AL55_RS11500;product=short-chain fatty acyl-CoA regulator family protein;protein_id=WP_003405904.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1251973 1253478 . + . ID=gene-AL55_RS11505;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=AL55_RS11505;old_locus_tag=AL55_01176 NZ_KK316828.1 Protein Homology CDS 1251973 1253478 . + 0 ID=cds-WP_003405907.1;Parent=gene-AL55_RS11505;Dbxref=GenBank:WP_003405907.1;Name=WP_003405907.1;Ontology_term=GO:0047547;gbkey=CDS;gene=prpD;go_function=2-methylcitrate dehydratase activity|0047547||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288002.1;locus_tag=AL55_RS11505;product=2-methylcitrate dehydratase PrpD;protein_id=WP_003405907.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1253475 1254656 . + . ID=gene-AL55_RS11510;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=AL55_RS11510;old_locus_tag=AL55_01177 NZ_KK316828.1 Protein Homology CDS 1253475 1254656 . + 0 ID=cds-WP_003405909.1;Parent=gene-AL55_RS11510;Dbxref=GenBank:WP_003405909.1;Name=WP_003405909.1;Ontology_term=GO:0006099,GO:0036440,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate synthase activity|0036440||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215647.1;locus_tag=AL55_RS11510;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_003405909.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1254668 1256398 . + . ID=gene-AL55_RS11515;Name=AL55_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11515;old_locus_tag=AL55_01178 NZ_KK316828.1 Protein Homology CDS 1254668 1256398 . + 0 ID=cds-WP_003405912.1;Parent=gene-AL55_RS11515;Dbxref=GenBank:WP_003405912.1;Name=WP_003405912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215648.1;locus_tag=AL55_RS11515;product=DUF3556 domain-containing protein;protein_id=WP_003405912.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1256410 1258689 . - . ID=gene-AL55_RS11520;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=AL55_RS11520;old_locus_tag=AL55_01179 NZ_KK316828.1 Protein Homology CDS 1256410 1258689 . - 0 ID=cds-WP_003405914.1;Parent=gene-AL55_RS11520;Dbxref=GenBank:WP_003405914.1;Name=WP_003405914.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215649.1;locus_tag=AL55_RS11520;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_003405914.1;transl_table=11 NZ_KK316828.1 cmsearch riboswitch 1258823 1259058 . - . ID=id-NZ_KK316828.1:1258823..1259058;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316828.1 RefSeq gene 1259265 1259501 . + . ID=gene-AL55_RS11525;Name=AL55_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11525;old_locus_tag=AL55_01180 NZ_KK316828.1 Protein Homology CDS 1259265 1259501 . + 0 ID=cds-WP_003405917.1;Parent=gene-AL55_RS11525;Dbxref=GenBank:WP_003405917.1;Name=WP_003405917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215650.1;locus_tag=AL55_RS11525;product=hypothetical protein;protein_id=WP_003405917.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1259615 1260304 . - . ID=gene-AL55_RS0104565;Name=AL55_RS0104565;end_range=1260304,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0104565;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 1259615 1260304 . - 0 ID=cds-AL55_RS0104565;Parent=gene-AL55_RS0104565;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1260304,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177790.1;locus_tag=AL55_RS0104565;partial=true;product=PPE family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1260349 1261610 . - . ID=gene-AL55_RS11530;Name=AL55_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11530;old_locus_tag=AL55_01181 NZ_KK316828.1 Protein Homology CDS 1261322 1261610 . - 0 ID=cds-WP_087902221.1-2;Parent=gene-AL55_RS11530;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS11530;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 1260349 1261322 . - 2 ID=cds-WP_087902221.1-2;Parent=gene-AL55_RS11530;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS11530;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1261567 1261847 . - . ID=gene-AL55_RS27650;Name=AL55_RS27650;end_range=1261847,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27650;old_locus_tag=AL55_01183;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 1261567 1261847 . - 2 ID=cds-AL55_RS27650;Parent=gene-AL55_RS27650;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1261847,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013623.6;locus_tag=AL55_RS27650;partial=true;product=pentapeptide repeat-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1261948 1262952 . - . ID=gene-AL55_RS0104575;Name=AL55_RS0104575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104575;old_locus_tag=AL55_01184;partial=true;start_range=.,1261948 NZ_KK316828.1 Protein Homology CDS 1261948 1262952 . - 0 ID=cds-WP_031648735.1;Parent=gene-AL55_RS0104575;Dbxref=GenBank:WP_031648735.1;Name=WP_031648735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177790.1;locus_tag=AL55_RS0104575;partial=true;product=PPE family protein;protein_id=WP_031648735.1;start_range=.,1261948;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1263216 1263380 . + . ID=gene-AL55_RS11540;Name=AL55_RS11540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS11540;old_locus_tag=AL55_01185;partial=true;pseudo=true;start_range=.,1263216 NZ_KK316828.1 Protein Homology CDS 1263216 1263380 . + 0 ID=cds-AL55_RS11540;Parent=gene-AL55_RS11540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003920476.1;locus_tag=AL55_RS11540;partial=true;product=acetyl-CoA acetyltransferase;pseudo=true;start_range=.,1263216;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1263430 1264100 . + . ID=gene-AL55_RS27245;Name=AL55_RS27245;end_range=1264100,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27245;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 1263430 1264100 . + 0 ID=cds-AL55_RS27245;Parent=gene-AL55_RS27245;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003824;end_range=1264100,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005147140.1;locus_tag=AL55_RS27245;partial=true;product=enoyl-CoA hydratase-related protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1264296 1265312 . - . ID=gene-AL55_RS11550;Name=AL55_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11550;old_locus_tag=AL55_01188 NZ_KK316828.1 Protein Homology CDS 1264296 1265312 . - 0 ID=cds-WP_003405932.1;Parent=gene-AL55_RS11550;Dbxref=GenBank:WP_003405932.1;Name=WP_003405932.1;Ontology_term=GO:0000166,GO:0016491,GO:0071949;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215654.1;locus_tag=AL55_RS11550;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003405932.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1265309 1265809 . - . ID=gene-AL55_RS11555;Name=AL55_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11555;old_locus_tag=AL55_01189 NZ_KK316828.1 Protein Homology CDS 1265309 1265809 . - 0 ID=cds-WP_003405935.1;Parent=gene-AL55_RS11555;Dbxref=GenBank:WP_003405935.1;Name=WP_003405935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215655.1;locus_tag=AL55_RS11555;product=isoprenylcysteine carboxyl methyltransferase family protein;protein_id=WP_003405935.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1266297 1267019 . + . ID=gene-AL55_RS11560;Name=AL55_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11560;old_locus_tag=AL55_01190 NZ_KK316828.1 Protein Homology CDS 1266297 1267019 . + 0 ID=cds-WP_003911379.1;Parent=gene-AL55_RS11560;Dbxref=GenBank:WP_003911379.1;Name=WP_003911379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011724051.1;locus_tag=AL55_RS11560;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_003911379.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1267027 1267833 . - . ID=gene-AL55_RS11565;Name=AL55_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11565;old_locus_tag=AL55_01191 NZ_KK316828.1 Protein Homology CDS 1267027 1267833 . - 0 ID=cds-WP_003405951.1;Parent=gene-AL55_RS11565;Dbxref=GenBank:WP_003405951.1;Name=WP_003405951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215657.1;locus_tag=AL55_RS11565;product=enoyl-CoA hydratase;protein_id=WP_003405951.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1267976 1268782 . - . ID=gene-AL55_RS11570;Name=AL55_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11570;old_locus_tag=AL55_01192 NZ_KK316828.1 Protein Homology CDS 1267976 1268782 . - 0 ID=cds-WP_003405957.1;Parent=gene-AL55_RS11570;Dbxref=GenBank:WP_003405957.1;Name=WP_003405957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215658.1;locus_tag=AL55_RS11570;product=enoyl-CoA hydratase;protein_id=WP_003405957.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1268886 1269968 . + . ID=gene-AL55_RS11575;Name=mcr;gbkey=Gene;gene=mcr;gene_biotype=protein_coding;locus_tag=AL55_RS11575;old_locus_tag=AL55_01193 NZ_KK316828.1 Protein Homology CDS 1268886 1269968 . + 0 ID=cds-WP_003898740.1;Parent=gene-AL55_RS11575;Dbxref=GenBank:WP_003898740.1;Name=WP_003898740.1;gbkey=CDS;gene=mcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215659.1;locus_tag=AL55_RS11575;product=alpha-methylacyl-CoA racemase;protein_id=WP_003898740.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1269980 1270732 . + . ID=gene-AL55_RS11580;Name=AL55_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11580;old_locus_tag=AL55_01194 NZ_KK316828.1 Protein Homology CDS 1269980 1270732 . + 0 ID=cds-WP_003405961.1;Parent=gene-AL55_RS11580;Dbxref=GenBank:WP_003405961.1;Name=WP_003405961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215660.1;locus_tag=AL55_RS11580;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_003405961.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1270860 1270991 . - . ID=gene-AL55_RS27915;Name=AL55_RS27915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27915;old_locus_tag=AL55_01195 NZ_KK316828.1 Protein Homology CDS 1270860 1270991 . - 0 ID=cds-WP_003405966.1;Parent=gene-AL55_RS27915;Dbxref=GenBank:WP_003405966.1;Name=WP_003405966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405966.1;locus_tag=AL55_RS27915;product=hypothetical protein;protein_id=WP_003405966.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1271247 1273592 . + . ID=gene-AL55_RS0104585;Name=AL55_RS0104585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104585 NZ_KK316828.1 Protein Homology CDS 1271247 1273592 . + 0 ID=cds-WP_003405970.1;Parent=gene-AL55_RS0104585;Dbxref=GenBank:WP_003405970.1;Name=WP_003405970.1;Ontology_term=GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015629850.1;locus_tag=AL55_RS0104585;product=MMPL family transporter;protein_id=WP_003405970.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1273725 1274375 . + . ID=gene-AL55_RS11585;Name=AL55_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11585;old_locus_tag=AL55_01198 NZ_KK316828.1 Protein Homology CDS 1273725 1274375 . + 0 ID=cds-WP_003405982.1;Parent=gene-AL55_RS11585;Dbxref=GenBank:WP_003405982.1;Name=WP_003405982.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215663.1;locus_tag=AL55_RS11585;product=class I SAM-dependent methyltransferase;protein_id=WP_003405982.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1274750 1274851 . + . ID=gene-AL55_RS27655;Name=AL55_RS27655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27655;partial=true;pseudo=true;start_range=.,1274750 NZ_KK316828.1 Protein Homology CDS 1274750 1274851 . + 0 ID=cds-AL55_RS27655;Parent=gene-AL55_RS27655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216464.1;locus_tag=AL55_RS27655;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1274750;transl_table=11 NZ_KK316828.1 RefSeq gene 1274853 1275128 . - . ID=gene-AL55_RS27660;Name=AL55_RS27660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27660 NZ_KK316828.1 Protein Homology CDS 1274853 1275128 . - 0 ID=cds-WP_003405990.1;Parent=gene-AL55_RS27660;Dbxref=GenBank:WP_003405990.1;Name=WP_003405990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405990.1;locus_tag=AL55_RS27660;product=hypothetical protein;protein_id=WP_003405990.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1275125 1276489 . - . ID=gene-AL55_RS11590;Name=AL55_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11590;old_locus_tag=AL55_01199 NZ_KK316828.1 Protein Homology CDS 1275125 1276489 . - 0 ID=cds-WP_009939811.1;Parent=gene-AL55_RS11590;Dbxref=GenBank:WP_009939811.1;Name=WP_009939811.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216461.1;locus_tag=AL55_RS11590;product=HNH endonuclease signature motif containing protein;protein_id=WP_009939811.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1276718 1277645 . + . ID=gene-AL55_RS25790;Name=AL55_RS25790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25790;old_locus_tag=AL55_01200;pseudo=true NZ_KK316828.1 Protein Homology CDS 1276718 1277645 . + 0 ID=cds-AL55_RS25790;Parent=gene-AL55_RS25790;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612358.1;locus_tag=AL55_RS25790;product=IS5-like element ISMt1 family transposase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1277729 1278442 . - . ID=gene-AL55_RS11595;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=AL55_RS11595;old_locus_tag=AL55_01201 NZ_KK316828.1 Protein Homology CDS 1277729 1278442 . - 0 ID=cds-WP_003406044.1;Parent=gene-AL55_RS11595;Dbxref=GenBank:WP_003406044.1;Name=WP_003406044.1;gbkey=CDS;gene=cobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215667.1;locus_tag=AL55_RS11595;product=NAD-dependent protein deacylase;protein_id=WP_003406044.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1278480 1278845 . + . ID=gene-AL55_RS11600;Name=AL55_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11600;old_locus_tag=AL55_01202 NZ_KK316828.1 Protein Homology CDS 1278480 1278845 . + 0 ID=cds-WP_009939812.1;Parent=gene-AL55_RS11600;Dbxref=GenBank:WP_009939812.1;Name=WP_009939812.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215668.1;locus_tag=AL55_RS11600;product=Rv1152 family transcriptional regulator;protein_id=WP_009939812.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1278823 1279671 . - . ID=gene-AL55_RS11605;Name=omt;gbkey=Gene;gene=omt;gene_biotype=protein_coding;locus_tag=AL55_RS11605;old_locus_tag=AL55_01203 NZ_KK316828.1 Protein Homology CDS 1278823 1279671 . - 0 ID=cds-WP_003898744.1;Parent=gene-AL55_RS11605;Dbxref=GenBank:WP_003898744.1;Name=WP_003898744.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;gene=omt;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215669.1;locus_tag=AL55_RS11605;product=class I SAM-dependent methyltransferase;protein_id=WP_003898744.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1279668 1280198 . - . ID=gene-AL55_RS11610;Name=AL55_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11610;old_locus_tag=AL55_01204 NZ_KK316828.1 Protein Homology CDS 1279668 1280198 . - 0 ID=cds-WP_023637376.1;Parent=gene-AL55_RS11610;Dbxref=GenBank:WP_023637376.1;Name=WP_023637376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012395864.1;locus_tag=AL55_RS11610;product=DUF1697 domain-containing protein;protein_id=WP_023637376.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1280254 1280697 . + . ID=gene-AL55_RS11615;Name=AL55_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11615;old_locus_tag=AL55_01205 NZ_KK316828.1 Protein Homology CDS 1280254 1280697 . + 0 ID=cds-WP_003406060.1;Parent=gene-AL55_RS11615;Dbxref=GenBank:WP_003406060.1;Name=WP_003406060.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215671.1;locus_tag=AL55_RS11615;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003406060.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1280855 1281043 . + . ID=gene-AL55_RS0104610;Name=AL55_RS0104610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104610 NZ_KK316828.1 Protein Homology CDS 1280855 1281043 . + 0 ID=cds-WP_003406063.1;Parent=gene-AL55_RS0104610;Dbxref=GenBank:WP_003406063.1;Name=WP_003406063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030031.1;locus_tag=AL55_RS0104610;product=DUF5302 domain-containing protein;protein_id=WP_003406063.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1281131 1281718 . + . ID=gene-AL55_RS11620;Name=AL55_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11620;old_locus_tag=AL55_01206 NZ_KK316828.1 Protein Homology CDS 1281131 1281718 . + 0 ID=cds-WP_003406064.1;Parent=gene-AL55_RS11620;Dbxref=GenBank:WP_003406064.1;Name=WP_003406064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215672.1;locus_tag=AL55_RS11620;product=HhH-GPD-type base excision DNA repair protein;protein_id=WP_003406064.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1281715 1281861 . + . ID=gene-AL55_RS25795;Name=AL55_RS25795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25795 NZ_KK316828.1 Protein Homology CDS 1281715 1281861 . + 0 ID=cds-WP_003406065.1;Parent=gene-AL55_RS25795;Dbxref=GenBank:WP_003406065.1;Name=WP_003406065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007169078.1;locus_tag=AL55_RS25795;product=hypothetical protein;protein_id=WP_003406065.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1281881 1282996 . - . ID=gene-AL55_RS11625;Name=AL55_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11625;old_locus_tag=AL55_01207 NZ_KK316828.1 Protein Homology CDS 1281881 1282996 . - 0 ID=cds-WP_003406066.1;Parent=gene-AL55_RS11625;Dbxref=GenBank:WP_003406066.1;Name=WP_003406066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215673.1;locus_tag=AL55_RS11625;product=Rv1157c family protein;protein_id=WP_003406066.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1283004 1283687 . - . ID=gene-AL55_RS11630;Name=AL55_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11630;old_locus_tag=AL55_01208 NZ_KK316828.1 Protein Homology CDS 1283004 1283687 . - 0 ID=cds-WP_003406075.1;Parent=gene-AL55_RS11630;Dbxref=GenBank:WP_003406075.1;Name=WP_003406075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215674.1;locus_tag=AL55_RS11630;product=hypothetical protein;protein_id=WP_003406075.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1283817 1285112 . + . ID=gene-AL55_RS11635;Name=pimE;gbkey=Gene;gene=pimE;gene_biotype=protein_coding;locus_tag=AL55_RS11635;old_locus_tag=AL55_01209 NZ_KK316828.1 Protein Homology CDS 1283817 1285112 . + 0 ID=cds-WP_003902013.1;Parent=gene-AL55_RS11635;Dbxref=GenBank:WP_003902013.1;Name=WP_003902013.1;gbkey=CDS;gene=pimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215675.1;locus_tag=AL55_RS11635;product=mannosyltransferase;protein_id=WP_003902013.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1285109 1285393 . - . ID=gene-AL55_RS11640;Name=AL55_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11640;old_locus_tag=AL55_01210 NZ_KK316828.1 Protein Homology CDS 1285109 1285393 . - 0 ID=cds-WP_003406082.1;Parent=gene-AL55_RS11640;Dbxref=GenBank:WP_003406082.1;Name=WP_003406082.1;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177641.1;locus_tag=AL55_RS11640;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_003406082.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1285420 1285845 . + . ID=gene-AL55_RS11645;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=AL55_RS11645;old_locus_tag=AL55_01211 NZ_KK316828.1 Protein Homology CDS 1285420 1285845 . + 0 ID=cds-WP_003905474.1;Parent=gene-AL55_RS11645;Dbxref=GenBank:WP_003905474.1;Name=WP_003905474.1;gbkey=CDS;gene=mutT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215676.1;locus_tag=AL55_RS11645;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_003905474.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1286153 1289851 . + . ID=gene-AL55_RS11650;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;locus_tag=AL55_RS11650;old_locus_tag=AL55_01212 NZ_KK316828.1 Protein Homology CDS 1286153 1289851 . + 0 ID=cds-WP_003898748.1;Parent=gene-AL55_RS11650;Dbxref=GenBank:WP_003898748.1;Name=WP_003898748.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narG;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215677.1;locus_tag=AL55_RS11650;product=nitrate reductase subunit alpha;protein_id=WP_003898748.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1289890 1291566 . + . ID=gene-AL55_RS11655;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AL55_RS11655;old_locus_tag=AL55_01213 NZ_KK316828.1 Protein Homology CDS 1289890 1291566 . + 0 ID=cds-WP_003406090.1;Parent=gene-AL55_RS11655;Dbxref=GenBank:WP_003406090.1;Name=WP_003406090.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898749.1;locus_tag=AL55_RS11655;product=nitrate reductase subunit beta;protein_id=WP_003406090.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1291563 1292228 . + . ID=gene-AL55_RS11660;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=AL55_RS11660;old_locus_tag=AL55_01214 NZ_KK316828.1 Protein Homology CDS 1291563 1292228 . + 0 ID=cds-WP_014584726.1;Parent=gene-AL55_RS11660;Dbxref=GenBank:WP_014584726.1;Name=WP_014584726.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911426.1;locus_tag=AL55_RS11660;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_014584726.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1292231 1292971 . + . ID=gene-AL55_RS11665;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AL55_RS11665;old_locus_tag=AL55_01215 NZ_KK316828.1 Protein Homology CDS 1292231 1292971 . + 0 ID=cds-WP_003406095.1;Parent=gene-AL55_RS11665;Dbxref=GenBank:WP_003406095.1;Name=WP_003406095.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215680.1;locus_tag=AL55_RS11665;product=respiratory nitrate reductase subunit gamma;protein_id=WP_003406095.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1292993 1294879 . + . ID=gene-AL55_RS11670;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=AL55_RS11670;old_locus_tag=AL55_01216 NZ_KK316828.1 Protein Homology CDS 1292993 1294879 . + 0 ID=cds-WP_003406099.1;Parent=gene-AL55_RS11670;Dbxref=GenBank:WP_003406099.1;Name=WP_003406099.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215681.1;locus_tag=AL55_RS11670;product=translational GTPase TypA;protein_id=WP_003406099.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1294977 1296884 . + . ID=gene-AL55_RS11675;Name=lpqW;gbkey=Gene;gene=lpqW;gene_biotype=protein_coding;locus_tag=AL55_RS11675;old_locus_tag=AL55_01217 NZ_KK316828.1 Protein Homology CDS 1294977 1296884 . + 0 ID=cds-WP_003406102.1;Parent=gene-AL55_RS11675;Dbxref=GenBank:WP_003406102.1;Name=WP_003406102.1;gbkey=CDS;gene=lpqW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215682.1;locus_tag=AL55_RS11675;product=lipoarabinomannan biosynthesis protein LpqW;protein_id=WP_003406102.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1296912 1297517 . - . ID=gene-AL55_RS11680;Name=AL55_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11680;old_locus_tag=AL55_01218 NZ_KK316828.1 Protein Homology CDS 1296912 1297517 . - 0 ID=cds-WP_003406104.1;Parent=gene-AL55_RS11680;Dbxref=GenBank:WP_003406104.1;Name=WP_003406104.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215683.1;locus_tag=AL55_RS11680;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003406104.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1297589 1298629 . - . ID=gene-AL55_RS11685;Name=AL55_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11685;old_locus_tag=AL55_01219 NZ_KK316828.1 Protein Homology CDS 1297589 1298629 . - 0 ID=cds-WP_003902014.1;Parent=gene-AL55_RS11685;Dbxref=GenBank:WP_003902014.1;Name=WP_003902014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177791.1;locus_tag=AL55_RS11685;product=PPE family protein;protein_id=WP_003902014.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1298647 1298949 . - . ID=gene-AL55_RS11690;Name=lipX;gbkey=Gene;gene=lipX;gene_biotype=protein_coding;gene_synonym=PE11;locus_tag=AL55_RS11690;old_locus_tag=AL55_01220 NZ_KK316828.1 Protein Homology CDS 1298647 1298949 . - 0 ID=cds-WP_003898752.1;Parent=gene-AL55_RS11690;Dbxref=GenBank:WP_003898752.1;Name=WP_003898752.1;gbkey=CDS;gene=lipX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177792.1;locus_tag=AL55_RS11690;product=lipase/esterase LipX;protein_id=WP_003898752.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1299129 1300040 . + . ID=gene-AL55_RS11695;Name=mshB;gbkey=Gene;gene=mshB;gene_biotype=protein_coding;locus_tag=AL55_RS11695;old_locus_tag=AL55_01221 NZ_KK316828.1 Protein Homology CDS 1299129 1300040 . + 0 ID=cds-WP_003406154.1;Parent=gene-AL55_RS11695;Dbxref=GenBank:WP_003406154.1;Name=WP_003406154.1;Ontology_term=GO:0010125,GO:0035595;gbkey=CDS;gene=mshB;go_function=N-acetylglucosaminylinositol deacetylase activity|0035595||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215686.1;locus_tag=AL55_RS11695;product=N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase;protein_id=WP_003406154.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1300132 1300572 . + . ID=gene-AL55_RS11700;Name=AL55_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11700;old_locus_tag=AL55_01222 NZ_KK316828.1 Protein Homology CDS 1300132 1300572 . + 0 ID=cds-WP_003406163.1;Parent=gene-AL55_RS11700;Dbxref=GenBank:WP_003406163.1;Name=WP_003406163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215687.2;locus_tag=AL55_RS11700;product=hypothetical protein;protein_id=WP_003406163.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1300580 1301506 . - . ID=gene-AL55_RS11705;Name=AL55_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11705;old_locus_tag=AL55_01223 NZ_KK316828.1 Protein Homology CDS 1300580 1301506 . - 0 ID=cds-WP_003898753.1;Parent=gene-AL55_RS11705;Dbxref=GenBank:WP_003898753.1;Name=WP_003898753.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177793.1;locus_tag=AL55_RS11705;product=PE family protein;protein_id=WP_003898753.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1301756 1304326 . + . ID=gene-AL55_RS11710;Name=fbiC;gbkey=Gene;gene=fbiC;gene_biotype=protein_coding;locus_tag=AL55_RS11710;old_locus_tag=AL55_01224 NZ_KK316828.1 Protein Homology CDS 1301756 1304326 . + 0 ID=cds-WP_003406167.1;Parent=gene-AL55_RS11710;Dbxref=GenBank:WP_003406167.1;Name=WP_003406167.1;Ontology_term=GO:0016765,GO:0051539;gbkey=CDS;gene=fbiC;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215689.1;locus_tag=AL55_RS11710;product=bifunctional FO biosynthesis protein CofGH;protein_id=WP_003406167.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1304432 1304764 . - . ID=gene-AL55_RS11715;Name=AL55_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11715;old_locus_tag=AL55_01225 NZ_KK316828.1 Protein Homology CDS 1304432 1304764 . - 0 ID=cds-WP_003406169.1;Parent=gene-AL55_RS11715;Dbxref=GenBank:WP_003406169.1;Name=WP_003406169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215690.1;locus_tag=AL55_RS11715;product=hemophore-related protein;protein_id=WP_003406169.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1304965 1306989 . - . ID=gene-AL55_RS11720;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=AL55_RS11720;old_locus_tag=AL55_01226 NZ_KK316828.1 Protein Homology CDS 1304965 1306989 . - 0 ID=cds-WP_003898755.1;Parent=gene-AL55_RS11720;Dbxref=GenBank:WP_003898755.1;Name=WP_003898755.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fadH;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215691.1;locus_tag=AL55_RS11720;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_003898755.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1306986 1307555 . - . ID=gene-AL55_RS11725;Name=AL55_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11725;old_locus_tag=AL55_01227 NZ_KK316828.1 Protein Homology CDS 1306986 1307555 . - 0 ID=cds-WP_003406182.1;Parent=gene-AL55_RS11725;Dbxref=GenBank:WP_003406182.1;Name=WP_003406182.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215692.1;locus_tag=AL55_RS11725;product=PadR family transcriptional regulator;protein_id=WP_003406182.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1307768 1308094 . + . ID=gene-AL55_RS11730;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=AL55_RS11730;old_locus_tag=AL55_01228 NZ_KK316828.1 Protein Homology CDS 1307768 1308094 . + 0 ID=cds-WP_003406185.1;Parent=gene-AL55_RS11730;Dbxref=GenBank:WP_003406185.1;Name=WP_003406185.1;Ontology_term=GO:0009055,GO:0046872;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215693.1;locus_tag=AL55_RS11730;product=ferredoxin;protein_id=WP_003406185.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1308127 1309215 . + . ID=gene-AL55_RS11735;Name=dapC;gbkey=Gene;gene=dapC;gene_biotype=protein_coding;locus_tag=AL55_RS11735;old_locus_tag=AL55_01229 NZ_KK316828.1 Protein Homology CDS 1308127 1309215 . + 0 ID=cds-WP_003898756.1;Parent=gene-AL55_RS11735;Dbxref=GenBank:WP_003898756.1;Name=WP_003898756.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=dapC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215694.1;locus_tag=AL55_RS11735;product=succinyldiaminopimelate transaminase;protein_id=WP_003898756.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1309243 1312062 . - . ID=gene-AL55_RS11740;Name=AL55_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11740;old_locus_tag=AL55_01230 NZ_KK316828.1 Protein Homology CDS 1309243 1312062 . - 0 ID=cds-WP_003406189.1;Parent=gene-AL55_RS11740;Dbxref=GenBank:WP_003406189.1;Name=WP_003406189.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215695.1;locus_tag=AL55_RS11740;product=DEAD/DEAH box helicase family protein;protein_id=WP_003406189.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1312489 1318746 . + . ID=gene-AL55_RS11745;Name=pks2;gbkey=Gene;gene=pks2;gene_biotype=protein_coding;locus_tag=AL55_RS11745;old_locus_tag=AL55_01231 NZ_KK316828.1 Protein Homology CDS 1312489 1318746 . + 0 ID=cds-WP_003406192.1;Parent=gene-AL55_RS11745;Dbxref=GenBank:WP_003406192.1;Name=WP_003406192.1;gbkey=CDS;gene=pks2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799162.1;locus_tag=AL55_RS11745;product=sulfolipid-1 biosynthesis phthioceranic/hydroxyphthioceranic acid synthase;protein_id=WP_003406192.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1318799 1320217 . + . ID=gene-AL55_RS11750;Name=papA3;gbkey=Gene;gene=papA3;gene_biotype=protein_coding;locus_tag=AL55_RS11750;old_locus_tag=AL55_01232 NZ_KK316828.1 Protein Homology CDS 1318799 1320217 . + 0 ID=cds-WP_003898759.1;Parent=gene-AL55_RS11750;Dbxref=GenBank:WP_003898759.1;Name=WP_003898759.1;gbkey=CDS;gene=papA3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215698.1;locus_tag=AL55_RS11750;product=acyltransferase PapA3;protein_id=WP_003898759.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1320239 1323292 . + . ID=gene-AL55_RS11755;Name=mmpL10;gbkey=Gene;gene=mmpL10;gene_biotype=protein_coding;locus_tag=AL55_RS11755;old_locus_tag=AL55_01233 NZ_KK316828.1 Protein Homology CDS 1320239 1323292 . + 0 ID=cds-WP_256388736.1;Parent=gene-AL55_RS11755;Dbxref=GenBank:WP_256388736.1;Name=WP_256388736.1;gbkey=CDS;gene=mmpL10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003889070.1;locus_tag=AL55_RS11755;product=RND transporter MmpL10;protein_id=WP_256388736.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1323296 1324375 . - . ID=gene-AL55_RS11760;Name=chp2;gbkey=Gene;gene=chp2;gene_biotype=protein_coding;locus_tag=AL55_RS11760;old_locus_tag=AL55_01234 NZ_KK316828.1 Protein Homology CDS 1323296 1324375 . - 0 ID=cds-WP_003406195.1;Parent=gene-AL55_RS11760;Dbxref=GenBank:WP_003406195.1;Name=WP_003406195.1;gbkey=CDS;gene=chp2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215700.1;locus_tag=AL55_RS11760;product=diacyltrehalose acyltransferase Chp2;protein_id=WP_003406195.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1324540 1326276 . - . ID=gene-AL55_RS11765;Name=fadD21;gbkey=Gene;gene=fadD21;gene_biotype=protein_coding;locus_tag=AL55_RS11765;old_locus_tag=AL55_01235 NZ_KK316828.1 Protein Homology CDS 1324540 1326276 . - 0 ID=cds-WP_003406196.1;Parent=gene-AL55_RS11765;Dbxref=GenBank:WP_003406196.1;Name=WP_003406196.1;gbkey=CDS;gene=fadD21;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215701.1;locus_tag=AL55_RS11765;product=fatty-acid--AMP ligase FAAL21/FadD21;protein_id=WP_003406196.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1326453 1328069 . - . ID=gene-AL55_RS11770;Name=AL55_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11770;old_locus_tag=AL55_01236 NZ_KK316828.1 Protein Homology CDS 1326453 1328069 . - 0 ID=cds-WP_003406197.1;Parent=gene-AL55_RS11770;Dbxref=GenBank:WP_003406197.1;Name=WP_003406197.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215702.1;locus_tag=AL55_RS11770;product=PucR family transcriptional regulator;protein_id=WP_003406197.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1328154 1329785 . + . ID=gene-AL55_RS11775;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=AL55_RS11775;old_locus_tag=AL55_01237 NZ_KK316828.1 Protein Homology CDS 1328154 1329785 . + 0 ID=cds-WP_003900286.1;Parent=gene-AL55_RS11775;Dbxref=GenBank:WP_003900286.1;Name=WP_003900286.1;Ontology_term=GO:0010133,GO:0003842;gbkey=CDS;gene=pruA;go_function=L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA;go_process=L-proline catabolic process to L-glutamate|0010133||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215703.1;locus_tag=AL55_RS11775;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_003900286.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1329785 1330774 . + . ID=gene-AL55_RS11780;Name=AL55_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11780;old_locus_tag=AL55_01238 NZ_KK316828.1 Protein Homology CDS 1329785 1330774 . + 0 ID=cds-WP_003900287.1;Parent=gene-AL55_RS11780;Dbxref=GenBank:WP_003900287.1;Name=WP_003900287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215704.1;locus_tag=AL55_RS11780;product=proline dehydrogenase family protein;protein_id=WP_003900287.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1330856 1331728 . + . ID=gene-AL55_RS11785;Name=sigI;gbkey=Gene;gene=sigI;gene_biotype=protein_coding;locus_tag=AL55_RS11785;old_locus_tag=AL55_01239 NZ_KK316828.1 Protein Homology CDS 1330856 1331728 . + 0 ID=cds-WP_003406207.1;Parent=gene-AL55_RS11785;Dbxref=GenBank:WP_003406207.1;Name=WP_003406207.1;gbkey=CDS;gene=sigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215705.1;locus_tag=AL55_RS11785;product=RNA polymerase sigma factor SigI;protein_id=WP_003406207.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1331744 1332622 . + . ID=gene-AL55_RS11790;Name=AL55_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11790;old_locus_tag=AL55_01240 NZ_KK316828.1 Protein Homology CDS 1331744 1332622 . + 0 ID=cds-WP_003406212.1;Parent=gene-AL55_RS11790;Dbxref=GenBank:WP_003406212.1;Name=WP_003406212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215706.1;locus_tag=AL55_RS11790;product=alpha/beta fold hydrolase;protein_id=WP_003406212.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1332695 1333609 . + . ID=gene-AL55_RS11795;Name=AL55_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11795;old_locus_tag=AL55_01241 NZ_KK316828.1 Protein Homology CDS 1332695 1333609 . + 0 ID=cds-WP_003406215.1;Parent=gene-AL55_RS11795;Dbxref=GenBank:WP_003406215.1;Name=WP_003406215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215707.1;locus_tag=AL55_RS11795;product=alpha/beta fold hydrolase;protein_id=WP_003406215.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1333691 1334518 . + . ID=gene-AL55_RS11800;Name=AL55_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11800;old_locus_tag=AL55_01242 NZ_KK316828.1 Protein Homology CDS 1333691 1334518 . + 0 ID=cds-WP_003898763.1;Parent=gene-AL55_RS11800;Dbxref=GenBank:WP_003898763.1;Name=WP_003898763.1;Ontology_term=GO:0016042,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215708.1;locus_tag=AL55_RS11800;product=esterase/lipase family protein;protein_id=WP_003898763.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1334558 1335979 . + . ID=gene-AL55_RS11805;Name=AL55_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11805;old_locus_tag=AL55_01243 NZ_KK316828.1 Protein Homology CDS 1334558 1335979 . + 0 ID=cds-WP_003905485.1;Parent=gene-AL55_RS11805;Dbxref=GenBank:WP_003905485.1;Name=WP_003905485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215709.1;locus_tag=AL55_RS11805;product=acyl-CoA synthetase;protein_id=WP_003905485.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1336012 1337277 . - . ID=gene-AL55_RS11810;Name=AL55_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11810;old_locus_tag=AL55_01244 NZ_KK316828.1 Protein Homology CDS 1336012 1337277 . - 0 ID=cds-WP_003406219.1;Parent=gene-AL55_RS11810;Dbxref=GenBank:WP_003406219.1;Name=WP_003406219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215710.1;locus_tag=AL55_RS11810;product=Rv1453 family transcriptional regulator;protein_id=WP_003406219.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1337767 1338066 . + . ID=gene-AL55_RS11815;Name=AL55_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11815;old_locus_tag=AL55_01245 NZ_KK316828.1 Protein Homology CDS 1337767 1338066 . + 0 ID=cds-WP_003406222.1;Parent=gene-AL55_RS11815;Dbxref=GenBank:WP_003406222.1;Name=WP_003406222.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177794.1;locus_tag=AL55_RS11815;product=PE family protein;protein_id=WP_003406222.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1338113 1339288 . + . ID=gene-AL55_RS11820;Name=AL55_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11820;old_locus_tag=AL55_01246 NZ_KK316828.1 Protein Homology CDS 1338113 1339288 . + 0 ID=cds-WP_003902024.1;Parent=gene-AL55_RS11820;Dbxref=GenBank:WP_003902024.1;Name=WP_003902024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177795.1;locus_tag=AL55_RS11820;product=PPE family protein PPE18;protein_id=WP_003902024.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1339423 1339719 . + . ID=gene-AL55_RS11825;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=protein_coding;locus_tag=AL55_RS11825;old_locus_tag=AL55_01247 NZ_KK316828.1 Protein Homology CDS 1339423 1339719 . + 0 ID=cds-WP_003421604.1;Parent=gene-AL55_RS11825;Dbxref=GenBank:WP_003421604.1;Name=WP_003421604.1;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215713.1;locus_tag=AL55_RS11825;product=type VII secretion system ESX-5 protein EsxJ;protein_id=WP_003421604.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1339770 1340054 . + . ID=gene-AL55_RS11830;Name=esxL;gbkey=Gene;gene=esxL;gene_biotype=protein_coding;locus_tag=AL55_RS11830;old_locus_tag=AL55_01248 NZ_KK316828.1 Protein Homology CDS 1339770 1340054 . + 0 ID=cds-WP_003898766.1;Parent=gene-AL55_RS11830;Dbxref=GenBank:WP_003898766.1;Name=WP_003898766.1;gbkey=CDS;gene=esxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215714.1;locus_tag=AL55_RS11830;product=type VII secretion system ESX-5 protein EsxL;protein_id=WP_003898766.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1340122 1341369 . - . ID=gene-AL55_RS11835;Name=AL55_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11835;old_locus_tag=AL55_01249 NZ_KK316828.1 Protein Homology CDS 1340122 1341369 . - 0 ID=cds-WP_003901078.1-2;Parent=gene-AL55_RS11835;Dbxref=GenBank:WP_003901078.1;Name=WP_003901078.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL55_RS11835;product=IS256-like element IS1081 family transposase;protein_id=WP_003901078.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1341706 1342983 . + . ID=gene-AL55_RS11840;Name=AL55_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11840;old_locus_tag=AL55_01250 NZ_KK316828.1 Protein Homology CDS 1341706 1342983 . + 0 ID=cds-WP_003406233.1;Parent=gene-AL55_RS11840;Dbxref=GenBank:WP_003406233.1;Name=WP_003406233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215716.1;locus_tag=AL55_RS11840;product=MHS family MFS transporter;protein_id=WP_003406233.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1342980 1343933 . - . ID=gene-AL55_RS11845;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AL55_RS11845;old_locus_tag=AL55_01251 NZ_KK316828.1 Protein Homology CDS 1342980 1343933 . - 0 ID=cds-WP_003898768.1;Parent=gene-AL55_RS11845;Dbxref=GenBank:WP_003898768.1;Name=WP_003898768.1;Ontology_term=GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215717.1;locus_tag=AL55_RS11845;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_003898768.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1344024 1345088 . + . ID=gene-AL55_RS11850;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=AL55_RS11850;old_locus_tag=AL55_01252 NZ_KK316828.1 Protein Homology CDS 1344024 1345088 . + 0 ID=cds-WP_003406235.1;Parent=gene-AL55_RS11850;Dbxref=GenBank:WP_003406235.1;Name=WP_003406235.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177796.1;locus_tag=AL55_RS11850;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_003406235.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1345085 1347388 . - . ID=gene-AL55_RS11860;Name=AL55_RS11860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS11860;old_locus_tag=AL55_01254;pseudo=true NZ_KK316828.1 Protein Homology CDS 1345085 1347388 . - 0 ID=cds-AL55_RS11860;Parent=gene-AL55_RS11860;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015289657.1;locus_tag=AL55_RS11860;product=AAA family ATPase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1347483 1348046 . + . ID=gene-AL55_RS11865;Name=AL55_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11865;old_locus_tag=AL55_01255 NZ_KK316828.1 Protein Homology CDS 1347483 1348046 . + 0 ID=cds-WP_003898770.1;Parent=gene-AL55_RS11865;Dbxref=GenBank:WP_003898770.1;Name=WP_003898770.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215721.1;locus_tag=AL55_RS11865;product=LOG family protein;protein_id=WP_003898770.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1348096 1349889 . + . ID=gene-AL55_RS11870;Name=fadD6;gbkey=Gene;gene=fadD6;gene_biotype=protein_coding;locus_tag=AL55_RS11870;old_locus_tag=AL55_01256 NZ_KK316828.1 Protein Homology CDS 1348096 1349889 . + 0 ID=cds-WP_003905502.1;Parent=gene-AL55_RS11870;Dbxref=GenBank:WP_003905502.1;Name=WP_003905502.1;gbkey=CDS;gene=fadD6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215722.1;locus_tag=AL55_RS11870;product=long-chain-acyl-CoA synthetase FadD6;protein_id=WP_003905502.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1349955 1350911 . + . ID=gene-AL55_RS11880;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AL55_RS11880;old_locus_tag=AL55_01257 NZ_KK316828.1 Protein Homology CDS 1349955 1350911 . + 0 ID=cds-WP_003406241.1;Parent=gene-AL55_RS11880;Dbxref=GenBank:WP_003406241.1;Name=WP_003406241.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215723.1;locus_tag=AL55_RS11880;product=dihydropteroate synthase;protein_id=WP_003406241.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1350908 1351882 . + . ID=gene-AL55_RS11885;Name=gpgS;gbkey=Gene;gene=gpgS;gene_biotype=protein_coding;locus_tag=AL55_RS11885;old_locus_tag=AL55_01258 NZ_KK316828.1 Protein Homology CDS 1350908 1351882 . + 0 ID=cds-WP_003406242.1;Parent=gene-AL55_RS11885;Dbxref=GenBank:WP_003406242.1;Name=WP_003406242.1;gbkey=CDS;gene=gpgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215724.1;locus_tag=AL55_RS11885;product=glucosyl-3-phosphoglycerate synthase;protein_id=WP_003406242.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1351921 1352289 . + . ID=gene-AL55_RS11890;Name=AL55_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11890;old_locus_tag=AL55_01259 NZ_KK316828.1 Protein Homology CDS 1351921 1352289 . + 0 ID=cds-WP_003406243.1;Parent=gene-AL55_RS11890;Dbxref=GenBank:WP_003406243.1;Name=WP_003406243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215725.1;locus_tag=AL55_RS11890;product=DivIVA domain-containing protein;protein_id=WP_003406243.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1352286 1352900 . + . ID=gene-AL55_RS11895;Name=tagA;gbkey=Gene;gene=tagA;gene_biotype=protein_coding;locus_tag=AL55_RS11895;old_locus_tag=AL55_01260 NZ_KK316828.1 Protein Homology CDS 1352286 1352900 . + 0 ID=cds-WP_003406244.1;Parent=gene-AL55_RS11895;Dbxref=GenBank:WP_003406244.1;Name=WP_003406244.1;gbkey=CDS;gene=tagA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215726.1;locus_tag=AL55_RS11895;product=DNA-3-methyladenine glycosylase I;protein_id=WP_003406244.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1353067 1353234 . + . ID=gene-AL55_RS11900;Name=AL55_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11900;old_locus_tag=AL55_01261 NZ_KK316828.1 Protein Homology CDS 1353067 1353234 . + 0 ID=cds-WP_003406247.1;Parent=gene-AL55_RS11900;Dbxref=GenBank:WP_003406247.1;Name=WP_003406247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003945169.1;locus_tag=AL55_RS11900;product=DUF3117 domain-containing protein;protein_id=WP_003406247.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1353262 1354425 . - . ID=gene-AL55_RS11905;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=AL55_RS11905;old_locus_tag=AL55_01262 NZ_KK316828.1 Protein Homology CDS 1353262 1354425 . - 0 ID=cds-WP_003898773.1;Parent=gene-AL55_RS11905;Dbxref=GenBank:WP_003898773.1;Name=WP_003898773.1;Ontology_term=GO:0009250,GO:0004373,GO:0016740;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA,transferase activity|0016740||IEA;go_process=glucan biosynthetic process|0009250||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215728.1;locus_tag=AL55_RS11905;product=glycogen synthase;protein_id=WP_003898773.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1354600 1355814 . + . ID=gene-AL55_RS11910;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AL55_RS11910;old_locus_tag=AL55_01263 NZ_KK316828.1 Protein Homology CDS 1354600 1355814 . + 0 ID=cds-WP_003406249.1;Parent=gene-AL55_RS11910;Dbxref=GenBank:WP_003406249.1;Name=WP_003406249.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011781656.1;locus_tag=AL55_RS11910;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_003406249.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1355913 1356428 . - . ID=gene-AL55_RS27465;Name=AL55_RS27465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27465;old_locus_tag=AL55_01264;partial=true;pseudo=true;start_range=.,1355913 NZ_KK316828.1 Protein Homology CDS 1355913 1356428 . - 0 ID=cds-AL55_RS27465;Parent=gene-AL55_RS27465;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799154.1;locus_tag=AL55_RS27465;partial=true;product=PE family protein;pseudo=true;start_range=.,1355913;transl_table=11 NZ_KK316828.1 RefSeq gene 1356523 1358208 . - . ID=gene-AL55_RS11920;Name=AL55_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11920;old_locus_tag=AL55_01265 NZ_KK316828.1 Protein Homology CDS 1356523 1358208 . - 0 ID=cds-WP_003898774.1;Parent=gene-AL55_RS11920;Dbxref=GenBank:WP_003898774.1;Name=WP_003898774.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215731.1;locus_tag=AL55_RS11920;product=CocE/NonD family hydrolase;protein_id=WP_003898774.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1358236 1358910 . - . ID=gene-AL55_RS11925;Name=AL55_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11925;old_locus_tag=AL55_01266 NZ_KK316828.1 Protein Homology CDS 1358236 1358910 . - 0 ID=cds-WP_003406252.1;Parent=gene-AL55_RS11925;Dbxref=GenBank:WP_003406252.1;Name=WP_003406252.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215732.1;locus_tag=AL55_RS11925;product=methyltransferase family protein;protein_id=WP_003406252.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1358919 1360565 . - . ID=gene-AL55_RS11930;Name=AL55_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11930;old_locus_tag=AL55_01267 NZ_KK316828.1 Protein Homology CDS 1358919 1360565 . - 0 ID=cds-WP_003902026.1;Parent=gene-AL55_RS11930;Dbxref=GenBank:WP_003902026.1;Name=WP_003902026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215733.1;locus_tag=AL55_RS11930;product=multidrug efflux ABC transporter permease;protein_id=WP_003902026.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1360562 1361497 . - . ID=gene-AL55_RS11935;Name=AL55_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11935;old_locus_tag=AL55_01268 NZ_KK316828.1 Protein Homology CDS 1360562 1361497 . - 0 ID=cds-WP_003900295.1;Parent=gene-AL55_RS11935;Dbxref=GenBank:WP_003900295.1;Name=WP_003900295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215734.1;locus_tag=AL55_RS11935;product=multidrug efflux ABC transporter ATP-binding protein;protein_id=WP_003900295.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1361487 1362125 . - . ID=gene-AL55_RS11940;Name=raaS;gbkey=Gene;gene=raaS;gene_biotype=protein_coding;locus_tag=AL55_RS11940;old_locus_tag=AL55_01269 NZ_KK316828.1 Protein Homology CDS 1361487 1362125 . - 0 ID=cds-WP_003406254.1;Parent=gene-AL55_RS11940;Dbxref=GenBank:WP_003406254.1;Name=WP_003406254.1;gbkey=CDS;gene=raaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215735.1;locus_tag=AL55_RS11940;product=transcriptional regulator RaaS;protein_id=WP_003406254.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1362267 1362914 . - . ID=gene-AL55_RS11945;Name=AL55_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11945;old_locus_tag=AL55_01270 NZ_KK316828.1 Protein Homology CDS 1362267 1362914 . - 0 ID=cds-WP_003406255.1;Parent=gene-AL55_RS11945;Dbxref=GenBank:WP_003406255.1;Name=WP_003406255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003406255.1;locus_tag=AL55_RS11945;product=SAM-dependent O-methyltransferase;protein_id=WP_003406255.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1363177 1363950 . + . ID=gene-AL55_RS11950;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=AL55_RS11950;old_locus_tag=AL55_01271 NZ_KK316828.1 Protein Homology CDS 1363177 1363950 . + 0 ID=cds-WP_003406257.1;Parent=gene-AL55_RS11950;Dbxref=GenBank:WP_003406257.1;Name=WP_003406257.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=sigE;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215737.1;locus_tag=AL55_RS11950;product=RNA polymerase sigma factor SigE;protein_id=WP_003406257.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1364108 1364572 . + . ID=gene-AL55_RS11955;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=AL55_RS11955;old_locus_tag=AL55_01272 NZ_KK316828.1 Protein Homology CDS 1364108 1364572 . + 0 ID=cds-WP_003406258.1;Parent=gene-AL55_RS11955;Dbxref=GenBank:WP_003406258.1;Name=WP_003406258.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215738.1;locus_tag=AL55_RS11955;product=anti-sigma E factor RseA;protein_id=WP_003406258.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1364713 1366227 . + . ID=gene-AL55_RS11960;Name=htrA;gbkey=Gene;gene=htrA;gene_biotype=protein_coding;locus_tag=AL55_RS11960;old_locus_tag=AL55_01273 NZ_KK316828.1 Protein Homology CDS 1364713 1366227 . + 0 ID=cds-WP_003911452.1;Parent=gene-AL55_RS11960;Dbxref=GenBank:WP_003911452.1;Name=WP_003911452.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=htrA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007773721.1;locus_tag=AL55_RS11960;product=serine protease HtrA;protein_id=WP_003911452.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1366229 1366624 . + . ID=gene-AL55_RS11965;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=AL55_RS11965;old_locus_tag=AL55_01274 NZ_KK316828.1 Protein Homology CDS 1366229 1366624 . + 0 ID=cds-WP_003406260.1;Parent=gene-AL55_RS11965;Dbxref=GenBank:WP_003406260.1;Name=WP_003406260.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215740.1;locus_tag=AL55_RS11965;product=Sec-independent protein translocase protein TatB;protein_id=WP_003406260.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1366657 1367488 . - . ID=gene-AL55_RS0104625;Name=AL55_RS0104625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0104625;old_locus_tag=AL55_01275;pseudo=true NZ_KK316828.1 Protein Homology CDS 1366657 1367488 . - 0 ID=cds-AL55_RS0104625;Parent=gene-AL55_RS0104625;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215741.1;locus_tag=AL55_RS0104625;product=HAD-IIA family hydrolase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1367599 1369062 . - . ID=gene-AL55_RS11970;Name=AL55_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11970;old_locus_tag=AL55_01276 NZ_KK316828.1 Protein Homology CDS 1367599 1369062 . - 0 ID=cds-WP_003898781.1;Parent=gene-AL55_RS11970;Dbxref=GenBank:WP_003898781.1;Name=WP_003898781.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215742.1;locus_tag=AL55_RS11970;product=PH domain-containing protein;protein_id=WP_003898781.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1369059 1369592 . - . ID=gene-AL55_RS11975;Name=AL55_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11975;old_locus_tag=AL55_01277 NZ_KK316828.1 Protein Homology CDS 1369059 1369592 . - 0 ID=cds-WP_003406264.1;Parent=gene-AL55_RS11975;Dbxref=GenBank:WP_003406264.1;Name=WP_003406264.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215743.1;locus_tag=AL55_RS11975;product=PH domain-containing protein;protein_id=WP_003406264.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1369687 1370244 . + . ID=gene-AL55_RS11980;Name=AL55_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11980;old_locus_tag=AL55_01278 NZ_KK316828.1 Protein Homology CDS 1369687 1370244 . + 0 ID=cds-WP_003406266.1;Parent=gene-AL55_RS11980;Dbxref=GenBank:WP_003406266.1;Name=WP_003406266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215744.1;locus_tag=AL55_RS11980;product=hypothetical protein;protein_id=WP_003406266.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1370296 1370469 . + . ID=gene-AL55_RS25815;Name=AL55_RS25815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25815 NZ_KK316828.1 Protein Homology CDS 1370296 1370469 . + 0 ID=cds-WP_003908664.1;Parent=gene-AL55_RS25815;Dbxref=GenBank:WP_003908664.1;Name=WP_003908664.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030032.1;locus_tag=AL55_RS25815;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003908664.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1370544 1371716 . - . ID=gene-AL55_RS11985;Name=mrp;gbkey=Gene;gene=mrp;gene_biotype=protein_coding;locus_tag=AL55_RS11985;old_locus_tag=AL55_01279 NZ_KK316828.1 Protein Homology CDS 1370544 1371716 . - 0 ID=cds-WP_003406273.1;Parent=gene-AL55_RS11985;Dbxref=GenBank:WP_003406273.1;Name=WP_003406273.1;gbkey=CDS;gene=mrp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215745.1;locus_tag=AL55_RS11985;product=Mrp/NBP35 family ATP-binding protein;protein_id=WP_003406273.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1371729 1372964 . - . ID=gene-AL55_RS11990;Name=AL55_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11990;old_locus_tag=AL55_01280 NZ_KK316828.1 Protein Homology CDS 1371729 1372964 . - 0 ID=cds-WP_003406276.1;Parent=gene-AL55_RS11990;Dbxref=GenBank:WP_003406276.1;Name=WP_003406276.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215746.1;locus_tag=AL55_RS11990;product=lytic transglycosylase domain-containing protein;protein_id=WP_003406276.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1373089 1373631 . - . ID=gene-AL55_RS11995;Name=AL55_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS11995;old_locus_tag=AL55_01281 NZ_KK316828.1 Protein Homology CDS 1373089 1373631 . - 0 ID=cds-WP_003406283.1;Parent=gene-AL55_RS11995;Dbxref=GenBank:WP_003406283.1;Name=WP_003406283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215747.1;locus_tag=AL55_RS11995;product=DUF1003 domain-containing protein;protein_id=WP_003406283.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1373628 1374935 . - . ID=gene-AL55_RS12000;Name=AL55_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12000;old_locus_tag=AL55_01282 NZ_KK316828.1 Protein Homology CDS 1373628 1374935 . - 0 ID=cds-WP_003406286.1;Parent=gene-AL55_RS12000;Dbxref=GenBank:WP_003406286.1;Name=WP_003406286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215748.1;locus_tag=AL55_RS12000;product=magnesium transporter;protein_id=WP_003406286.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1374997 1375593 . - . ID=gene-AL55_RS12005;Name=AL55_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12005;old_locus_tag=AL55_01283 NZ_KK316828.1 Protein Homology CDS 1374997 1375593 . - 0 ID=cds-WP_003406288.1;Parent=gene-AL55_RS12005;Dbxref=GenBank:WP_003406288.1;Name=WP_003406288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215749.1;locus_tag=AL55_RS12005;product=DUF4190 domain-containing protein;protein_id=WP_003406288.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1375743 1376270 . + . ID=gene-AL55_RS12010;Name=AL55_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12010;old_locus_tag=AL55_01284 NZ_KK316828.1 Protein Homology CDS 1375743 1376270 . + 0 ID=cds-WP_003406290.1;Parent=gene-AL55_RS12010;Dbxref=GenBank:WP_003406290.1;Name=WP_003406290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215750.1;locus_tag=AL55_RS12010;product=YflT domain-containing protein;protein_id=WP_003406290.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1376291 1377697 . + . ID=gene-AL55_RS12015;Name=lpqY;gbkey=Gene;gene=lpqY;gene_biotype=protein_coding;locus_tag=AL55_RS12015;old_locus_tag=AL55_01285 NZ_KK316828.1 Protein Homology CDS 1376291 1377697 . + 0 ID=cds-WP_003898783.1;Parent=gene-AL55_RS12015;Dbxref=GenBank:WP_003898783.1;Name=WP_003898783.1;gbkey=CDS;gene=lpqY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215751.1;locus_tag=AL55_RS12015;product=trehalose ABC transporter substrate-binding protein LpqY;protein_id=WP_003898783.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1377694 1378617 . + . ID=gene-AL55_RS12020;Name=sugA;gbkey=Gene;gene=sugA;gene_biotype=protein_coding;locus_tag=AL55_RS12020;old_locus_tag=AL55_01286 NZ_KK316828.1 Protein Homology CDS 1377694 1378617 . + 0 ID=cds-WP_003406295.1;Parent=gene-AL55_RS12020;Dbxref=GenBank:WP_003406295.1;Name=WP_003406295.1;gbkey=CDS;gene=sugA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215752.1;locus_tag=AL55_RS12020;product=trehalose ABC transporter permease SugA;protein_id=WP_003406295.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1378622 1379446 . + . ID=gene-AL55_RS12025;Name=sugB;gbkey=Gene;gene=sugB;gene_biotype=protein_coding;locus_tag=AL55_RS12025;old_locus_tag=AL55_01287 NZ_KK316828.1 Protein Homology CDS 1378622 1379446 . + 0 ID=cds-WP_003900298.1;Parent=gene-AL55_RS12025;Dbxref=GenBank:WP_003900298.1;Name=WP_003900298.1;gbkey=CDS;gene=sugB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215753.1;locus_tag=AL55_RS12025;product=trehalose ABC transporter permease SugB;protein_id=WP_003900298.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1379451 1380632 . + . ID=gene-AL55_RS12030;Name=sugC;gbkey=Gene;gene=sugC;gene_biotype=protein_coding;locus_tag=AL55_RS12030;old_locus_tag=AL55_01288 NZ_KK316828.1 Protein Homology CDS 1379451 1380632 . + 0 ID=cds-WP_003406299.1;Parent=gene-AL55_RS12030;Dbxref=GenBank:WP_003406299.1;Name=WP_003406299.1;gbkey=CDS;gene=sugC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215754.1;locus_tag=AL55_RS12030;product=trehalose ABC transporter ATP-binding protein SugC;protein_id=WP_003406299.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1380709 1381809 . - . ID=gene-AL55_RS12035;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AL55_RS12035;old_locus_tag=AL55_01289 NZ_KK316828.1 Protein Homology CDS 1380709 1381809 . - 0 ID=cds-WP_003406300.1;Parent=gene-AL55_RS12035;Dbxref=GenBank:WP_003406300.1;Name=WP_003406300.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215755.1;locus_tag=AL55_RS12035;product=magnesium/cobalt transporter CorA;protein_id=WP_003406300.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1381980 1382969 . + . ID=gene-AL55_RS12040;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AL55_RS12040;old_locus_tag=AL55_01290 NZ_KK316828.1 Protein Homology CDS 1381980 1382969 . + 0 ID=cds-WP_003406301.1;Parent=gene-AL55_RS12040;Dbxref=GenBank:WP_003406301.1;Name=WP_003406301.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;gene=mdh;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215756.1;locus_tag=AL55_RS12040;product=malate dehydrogenase;protein_id=WP_003406301.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1383045 1383305 . + . ID=gene-AL55_RS12045;Name=vapB33;gbkey=Gene;gene=vapB33;gene_biotype=protein_coding;locus_tag=AL55_RS12045;old_locus_tag=AL55_01291 NZ_KK316828.1 Protein Homology CDS 1383045 1383305 . + 0 ID=cds-WP_003406302.1;Parent=gene-AL55_RS12045;Dbxref=GenBank:WP_003406302.1;Name=WP_003406302.1;gbkey=CDS;gene=vapB33;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215757.1;locus_tag=AL55_RS12045;product=type II toxin-antitoxin system antitoxin VapB33;protein_id=WP_003406302.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1383302 1383733 . + . ID=gene-AL55_RS12050;Name=AL55_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12050;old_locus_tag=AL55_01292 NZ_KK316828.1 Protein Homology CDS 1383302 1383733 . + 0 ID=cds-WP_003406304.1;Parent=gene-AL55_RS12050;Dbxref=GenBank:WP_003406304.1;Name=WP_003406304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215758.1;locus_tag=AL55_RS12050;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003406304.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1383756 1385339 . - . ID=gene-AL55_RS12055;Name=AL55_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12055;old_locus_tag=AL55_01293 NZ_KK316828.1 Protein Homology CDS 1383756 1385339 . - 0 ID=cds-WP_009940130.1;Parent=gene-AL55_RS12055;Dbxref=GenBank:WP_009940130.1;Name=WP_009940130.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177798.1;locus_tag=AL55_RS12055;product=PE family protein;protein_id=WP_009940130.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1385519 1386379 . + . ID=gene-AL55_RS12060;Name=lpqZ;gbkey=Gene;gene=lpqZ;gene_biotype=protein_coding;locus_tag=AL55_RS12060;old_locus_tag=AL55_01294 NZ_KK316828.1 Protein Homology CDS 1385519 1386379 . + 0 ID=cds-WP_003900301.1;Parent=gene-AL55_RS12060;Dbxref=GenBank:WP_003900301.1;Name=WP_003900301.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=lpqZ;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215760.1;locus_tag=AL55_RS12060;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_003900301.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1386460 1387290 . - . ID=gene-AL55_RS12065;Name=AL55_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12065;old_locus_tag=AL55_01295 NZ_KK316828.1 Protein Homology CDS 1386460 1387290 . - 0 ID=cds-WP_003898788.1;Parent=gene-AL55_RS12065;Dbxref=GenBank:WP_003898788.1;Name=WP_003898788.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215761.1;locus_tag=AL55_RS12065;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003898788.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1387347 1387640 . - . ID=gene-AL55_RS12070;Name=relE;gbkey=Gene;gene=relE;gene_biotype=protein_coding;locus_tag=AL55_RS12070;old_locus_tag=AL55_01296 NZ_KK316828.1 Protein Homology CDS 1387347 1387640 . - 0 ID=cds-WP_003898789.1;Parent=gene-AL55_RS12070;Dbxref=GenBank:WP_003898789.1;Name=WP_003898789.1;gbkey=CDS;gene=relE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215762.1;locus_tag=AL55_RS12070;product=type II toxin-antitoxin system mRNA interferase RelE;protein_id=WP_003898789.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1387637 1387906 . - . ID=gene-AL55_RS12075;Name=relB;gbkey=Gene;gene=relB;gene_biotype=protein_coding;locus_tag=AL55_RS12075;old_locus_tag=AL55_01297 NZ_KK316828.1 Protein Homology CDS 1387637 1387906 . - 0 ID=cds-WP_003406322.1;Parent=gene-AL55_RS12075;Dbxref=GenBank:WP_003406322.1;Name=WP_003406322.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;gene=relB;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215763.1;locus_tag=AL55_RS12075;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003406322.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1388019 1391714 . - . ID=gene-AL55_RS12080;Name=AL55_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12080;old_locus_tag=AL55_01298 NZ_KK316828.1 Protein Homology CDS 1388019 1391714 . - 0 ID=cds-WP_003406323.1;Parent=gene-AL55_RS12080;Dbxref=GenBank:WP_003406323.1;Name=WP_003406323.1;Ontology_term=GO:0006099,GO:0004591,GO:0016746,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,acyltransferase activity|0016746||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215764.2;locus_tag=AL55_RS12080;product=multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;protein_id=WP_003406323.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1391856 1392644 . - . ID=gene-AL55_RS12085;Name=AL55_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12085;old_locus_tag=AL55_01299 NZ_KK316828.1 Protein Homology CDS 1391856 1392644 . - 0 ID=cds-WP_003406325.1;Parent=gene-AL55_RS12085;Dbxref=GenBank:WP_003406325.1;Name=WP_003406325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215765.1;locus_tag=AL55_RS12085;product=hypothetical protein;protein_id=WP_003406325.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1392841 1394580 . + . ID=gene-AL55_RS12090;Name=AL55_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12090;old_locus_tag=AL55_01300 NZ_KK316828.1 Protein Homology CDS 1392841 1394580 . + 0 ID=cds-WP_003898791.1;Parent=gene-AL55_RS12090;Dbxref=GenBank:WP_003898791.1;Name=WP_003898791.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215766.1;locus_tag=AL55_RS12090;product=MFS transporter;protein_id=WP_003898791.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1394483 1397902 . - . ID=gene-AL55_RS12095;Name=AL55_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12095;old_locus_tag=AL55_01301 NZ_KK316828.1 Protein Homology CDS 1394483 1397902 . - 0 ID=cds-WP_003406332.1;Parent=gene-AL55_RS12095;Dbxref=GenBank:WP_003406332.1;Name=WP_003406332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215767.1;locus_tag=AL55_RS12095;product=TM0106 family RecB-like putative nuclease;protein_id=WP_003406332.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1397958 1398566 . - . ID=gene-AL55_RS12100;Name=lprE;gbkey=Gene;gene=lprE;gene_biotype=protein_coding;locus_tag=AL55_RS12100;old_locus_tag=AL55_01302 NZ_KK316828.1 Protein Homology CDS 1397958 1398566 . - 0 ID=cds-WP_003406334.1;Parent=gene-AL55_RS12100;Dbxref=GenBank:WP_003406334.1;Name=WP_003406334.1;gbkey=CDS;gene=lprE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215768.1;locus_tag=AL55_RS12100;product=LppP/LprE family lipoprotein;protein_id=WP_003406334.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1398632 1400323 . + . ID=gene-AL55_RS12105;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=AL55_RS12105;old_locus_tag=AL55_01303 NZ_KK316828.1 Protein Homology CDS 1398632 1400323 . + 0 ID=cds-WP_003898793.1;Parent=gene-AL55_RS12105;Dbxref=GenBank:WP_003898793.1;Name=WP_003898793.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215769.1;locus_tag=AL55_RS12105;product=DEAD/DEAH box helicase;protein_id=WP_003898793.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1400320 1401471 . + . ID=gene-AL55_RS12110;Name=AL55_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12110;old_locus_tag=AL55_01304 NZ_KK316828.1 Protein Homology CDS 1400320 1401471 . + 0 ID=cds-WP_003406347.1;Parent=gene-AL55_RS12110;Dbxref=GenBank:WP_003406347.1;Name=WP_003406347.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215770.1;locus_tag=AL55_RS12110;product=acyltransferase family protein;protein_id=WP_003406347.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1401440 1402048 . - . ID=gene-AL55_RS12115;Name=AL55_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12115;old_locus_tag=AL55_01305 NZ_KK316828.1 Protein Homology CDS 1401440 1402048 . - 0 ID=cds-WP_003406350.1;Parent=gene-AL55_RS12115;Dbxref=GenBank:WP_003406350.1;Name=WP_003406350.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215771.1;locus_tag=AL55_RS12115;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003406350.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1402048 1403265 . - . ID=gene-AL55_RS12120;Name=cyp130;gbkey=Gene;gene=cyp130;gene_biotype=protein_coding;locus_tag=AL55_RS12120;old_locus_tag=AL55_01306 NZ_KK316828.1 Protein Homology CDS 1402048 1403265 . - 0 ID=cds-WP_003406352.1;Parent=gene-AL55_RS12120;Dbxref=GenBank:WP_003406352.1;Name=WP_003406352.1;gbkey=CDS;gene=cyp130;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215772.1;locus_tag=AL55_RS12120;product=cytochrome P450 Cyp130;protein_id=WP_003406352.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1403379 1404746 . - . ID=gene-AL55_RS12125;Name=AL55_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12125;old_locus_tag=AL55_01307 NZ_KK316828.1 Protein Homology CDS 1403379 1404746 . - 0 ID=cds-WP_003406358.1;Parent=gene-AL55_RS12125;Dbxref=GenBank:WP_003406358.1;Name=WP_003406358.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215773.1;locus_tag=AL55_RS12125;product=FAD-binding oxidoreductase;protein_id=WP_003406358.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1404743 1406003 . - . ID=gene-AL55_RS27250;Name=AL55_RS27250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27250;pseudo=true NZ_KK316828.1 Protein Homology CDS 1404743 1406003 . - 0 ID=cds-AL55_RS27250;Parent=gene-AL55_RS27250;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215774.1;locus_tag=AL55_RS27250;product=MFS transporter;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1406074 1406901 . + . ID=gene-AL55_RS12135;Name=udgB;gbkey=Gene;gene=udgB;gene_biotype=protein_coding;locus_tag=AL55_RS12135;old_locus_tag=AL55_01309 NZ_KK316828.1 Protein Homology CDS 1406074 1406901 . + 0 ID=cds-WP_003911466.1;Parent=gene-AL55_RS12135;Dbxref=GenBank:WP_003911466.1;Name=WP_003911466.1;gbkey=CDS;gene=udgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011724119.1;locus_tag=AL55_RS12135;product=uracil-DNA glycosylase;protein_id=WP_003911466.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1406903 1408021 . + . ID=gene-AL55_RS12140;Name=AL55_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12140;old_locus_tag=AL55_01310 NZ_KK316828.1 Protein Homology CDS 1406903 1408021 . + 0 ID=cds-WP_003406361.1;Parent=gene-AL55_RS12140;Dbxref=GenBank:WP_003406361.1;Name=WP_003406361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215776.1;locus_tag=AL55_RS12140;product=FAD-binding protein;protein_id=WP_003406361.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1408147 1408596 . - . ID=gene-AL55_RS12145;Name=AL55_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12145;old_locus_tag=AL55_01311 NZ_KK316828.1 Protein Homology CDS 1408147 1408596 . - 0 ID=cds-WP_003406364.1;Parent=gene-AL55_RS12145;Dbxref=GenBank:WP_003406364.1;Name=WP_003406364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215777.1;locus_tag=AL55_RS12145;product=F420H(2)-dependent quinone reductase;protein_id=WP_003406364.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1408601 1409035 . - . ID=gene-AL55_RS12150;Name=AL55_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12150;old_locus_tag=AL55_01312 NZ_KK316828.1 Protein Homology CDS 1408601 1409035 . - 0 ID=cds-WP_003898798.1;Parent=gene-AL55_RS12150;Dbxref=GenBank:WP_003898798.1;Name=WP_003898798.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215778.1;locus_tag=AL55_RS12150;product=HIT family protein;protein_id=WP_003898798.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1409094 1410482 . + . ID=gene-AL55_RS12155;Name=AL55_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12155;old_locus_tag=AL55_01313 NZ_KK316828.1 Protein Homology CDS 1409094 1410482 . + 0 ID=cds-WP_003406369.1;Parent=gene-AL55_RS12155;Dbxref=GenBank:WP_003406369.1;Name=WP_003406369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215779.1;locus_tag=AL55_RS12155;product=amidase;protein_id=WP_003406369.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1410557 1411750 . + . ID=gene-AL55_RS12160;Name=AL55_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12160;old_locus_tag=AL55_01314 NZ_KK316828.1 Protein Homology CDS 1410557 1411750 . + 0 ID=cds-WP_003406372.1;Parent=gene-AL55_RS12160;Dbxref=GenBank:WP_003406372.1;Name=WP_003406372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215780.1;locus_tag=AL55_RS12160;product=adenylate cyclase;protein_id=WP_003406372.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1411922 1412602 . + . ID=gene-AL55_RS12165;Name=abmR;gbkey=Gene;gene=abmR;gene_biotype=protein_coding;locus_tag=AL55_RS12165;old_locus_tag=AL55_01315 NZ_KK316828.1 Protein Homology CDS 1411922 1412602 . + 0 ID=cds-WP_003406375.1;Parent=gene-AL55_RS12165;Dbxref=GenBank:WP_003406375.1;Name=WP_003406375.1;gbkey=CDS;gene=abmR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003406375.1;locus_tag=AL55_RS12165;product=transcriptional regulator AbmR;protein_id=WP_003406375.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1412622 1414502 . - . ID=gene-AL55_RS12170;Name=pknH;gbkey=Gene;gene=pknH;gene_biotype=protein_coding;locus_tag=AL55_RS12170;old_locus_tag=AL55_01316 NZ_KK316828.1 Protein Homology CDS 1412622 1414502 . - 0 ID=cds-WP_003898799.1;Parent=gene-AL55_RS12170;Dbxref=GenBank:WP_003898799.1;Name=WP_003898799.1;gbkey=CDS;gene=pknH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215782.1;locus_tag=AL55_RS12170;product=serine/threonine protein kinase PknH;protein_id=WP_003898799.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1414843 1416009 . - . ID=gene-AL55_RS12175;Name=embR;gbkey=Gene;gene=embR;gene_biotype=protein_coding;locus_tag=AL55_RS12175;old_locus_tag=AL55_01317 NZ_KK316828.1 Protein Homology CDS 1414843 1416009 . - 0 ID=cds-WP_003406553.1;Parent=gene-AL55_RS12175;Dbxref=GenBank:WP_003406553.1;Name=WP_003406553.1;Note=Phosphorylation of EmbR by cognate serine/threonine kinase PknH leads to increased DNA-binding activity%2C increased expression of embCAB genes%2C and reduced senstivity to ethambutol.;gbkey=CDS;gene=embR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215783.1;locus_tag=AL55_RS12175;product=ATPase/transcriptional regulator EmbR;protein_id=WP_003406553.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1416320 1417018 . - . ID=gene-AL55_RS12180;Name=AL55_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12180;old_locus_tag=AL55_01318 NZ_KK316828.1 Protein Homology CDS 1416320 1417018 . - 0 ID=cds-WP_003898800.1;Parent=gene-AL55_RS12180;Dbxref=GenBank:WP_003898800.1;Name=WP_003898800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215784.1;locus_tag=AL55_RS12180;product=C39 family peptidase;protein_id=WP_003898800.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1417241 1417623 . - . ID=gene-AL55_RS25830;Name=AL55_RS25830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25830;old_locus_tag=AL55_01319;pseudo=true NZ_KK316828.1 Protein Homology CDS 1417241 1417623 . - 0 ID=cds-AL55_RS25830;Parent=gene-AL55_RS25830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215785.1;locus_tag=AL55_RS25830;product=DUF4189 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1417684 1418418 . - . ID=gene-AL55_RS12185;Name=lprA;gbkey=Gene;gene=lprA;gene_biotype=protein_coding;locus_tag=AL55_RS12185;old_locus_tag=AL55_01320 NZ_KK316828.1 Protein Homology CDS 1417684 1418418 . - 0 ID=cds-WP_003406562.1;Parent=gene-AL55_RS12185;Dbxref=GenBank:WP_003406562.1;Name=WP_003406562.1;gbkey=CDS;gene=lprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215786.1;locus_tag=AL55_RS12185;product=TLR2 agonist LprA;protein_id=WP_003406562.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1418631 1418972 . - . ID=gene-AL55_RS12190;Name=AL55_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12190;old_locus_tag=AL55_01321 NZ_KK316828.1 Protein Homology CDS 1418631 1418972 . - 0 ID=cds-WP_003406566.1;Parent=gene-AL55_RS12190;Dbxref=GenBank:WP_003406566.1;Name=WP_003406566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215787.1;locus_tag=AL55_RS12190;product=DUF732 domain-containing protein;protein_id=WP_003406566.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1419080 1420975 . - . ID=gene-AL55_RS12195;Name=AL55_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12195;old_locus_tag=AL55_01322 NZ_KK316828.1 Protein Homology CDS 1419080 1420975 . - 0 ID=cds-WP_003406569.1;Parent=gene-AL55_RS12195;Dbxref=GenBank:WP_003406569.1;Name=WP_003406569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215788.1;locus_tag=AL55_RS12195;product=fatty acid ABC transporter ATP-binding protein/permease;protein_id=WP_003406569.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1420972 1422720 . - . ID=gene-AL55_RS12200;Name=AL55_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12200;old_locus_tag=AL55_01323 NZ_KK316828.1 Protein Homology CDS 1420972 1422720 . - 0 ID=cds-WP_003406574.1;Parent=gene-AL55_RS12200;Dbxref=GenBank:WP_003406574.1;Name=WP_003406574.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215789.1;locus_tag=AL55_RS12200;product=ABC transporter ATP-binding protein;protein_id=WP_003406574.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1422867 1423424 . + . ID=gene-AL55_RS12205;Name=lprB;gbkey=Gene;gene=lprB;gene_biotype=protein_coding;locus_tag=AL55_RS12205;old_locus_tag=AL55_01324 NZ_KK316828.1 Protein Homology CDS 1422867 1423424 . + 0 ID=cds-WP_003901123.1;Parent=gene-AL55_RS12205;Dbxref=GenBank:WP_003901123.1;Name=WP_003901123.1;gbkey=CDS;gene=lprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215790.1;locus_tag=AL55_RS12205;product=DUF3558 domain-containing protein;protein_id=WP_003901123.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1423421 1423963 . + . ID=gene-AL55_RS12210;Name=lprC;gbkey=Gene;gene=lprC;gene_biotype=protein_coding;locus_tag=AL55_RS12210;old_locus_tag=AL55_01325 NZ_KK316828.1 Protein Homology CDS 1423421 1423963 . + 0 ID=cds-WP_003900308.1;Parent=gene-AL55_RS12210;Dbxref=GenBank:WP_003900308.1;Name=WP_003900308.1;gbkey=CDS;gene=lprC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215791.1;locus_tag=AL55_RS12210;product=DUF3558 domain-containing protein;protein_id=WP_003900308.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1424108 1424614 . - . ID=gene-AL55_RS12215;Name=AL55_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12215;old_locus_tag=AL55_01326 NZ_KK316828.1 Protein Homology CDS 1424108 1424614 . - 0 ID=cds-WP_003898805.1;Parent=gene-AL55_RS12215;Dbxref=GenBank:WP_003898805.1;Name=WP_003898805.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385265.1;locus_tag=AL55_RS12215;product=SixA phosphatase family protein;protein_id=WP_003898805.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1424936 1426087 . + . ID=gene-AL55_RS12220;Name=AL55_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12220;old_locus_tag=AL55_01327 NZ_KK316828.1 Protein Homology CDS 1424936 1426087 . + 0 ID=cds-WP_003911418.1;Parent=gene-AL55_RS12220;Dbxref=GenBank:WP_003911418.1;Name=WP_003911418.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011741672.1;locus_tag=AL55_RS12220;product=metallophosphoesterase family protein;protein_id=WP_003911418.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1426084 1428711 . + . ID=gene-AL55_RS12225;Name=AL55_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12225;old_locus_tag=AL55_01328 NZ_KK316828.1 Protein Homology CDS 1426084 1428711 . + 0 ID=cds-WP_003898806.1;Parent=gene-AL55_RS12225;Dbxref=GenBank:WP_003898806.1;Name=WP_003898806.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215794.1;locus_tag=AL55_RS12225;product=AAA family ATPase;protein_id=WP_003898806.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1428732 1430318 . + . ID=gene-AL55_RS12230;Name=AL55_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12230;old_locus_tag=AL55_01329 NZ_KK316828.1 Protein Homology CDS 1428732 1430318 . + 0 ID=cds-WP_003406598.1;Parent=gene-AL55_RS12230;Dbxref=GenBank:WP_003406598.1;Name=WP_003406598.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215795.1;locus_tag=AL55_RS12230;product=GMC family oxidoreductase;protein_id=WP_003406598.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1430335 1432110 . - . ID=gene-AL55_RS12235;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=AL55_RS12235;old_locus_tag=AL55_01330 NZ_KK316828.1 Protein Homology CDS 1430335 1432110 . - 0 ID=cds-WP_003900310.1;Parent=gene-AL55_RS12235;Dbxref=GenBank:WP_003900310.1;Name=WP_003900310.1;gbkey=CDS;gene=oppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215796.1;locus_tag=AL55_RS12235;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_003900310.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1432103 1433941 . - . ID=gene-AL55_RS12240;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AL55_RS12240;old_locus_tag=AL55_01331 NZ_KK316828.1 Protein Homology CDS 1432103 1433941 . - 0 ID=cds-WP_003406602.1;Parent=gene-AL55_RS12240;Dbxref=GenBank:WP_003406602.1;Name=WP_003406602.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=oppD;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215797.1;locus_tag=AL55_RS12240;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_003406602.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1433938 1434813 . - . ID=gene-AL55_RS12245;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=AL55_RS12245;old_locus_tag=AL55_01332 NZ_KK316828.1 Protein Homology CDS 1433938 1434813 . - 0 ID=cds-WP_003406607.1;Parent=gene-AL55_RS12245;Dbxref=GenBank:WP_003406607.1;Name=WP_003406607.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=oppC;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215798.1;locus_tag=AL55_RS12245;product=ABC transporter permease;protein_id=WP_003406607.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1434810 1435787 . - . ID=gene-AL55_RS12250;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AL55_RS12250;old_locus_tag=AL55_01333 NZ_KK316828.1 Protein Homology CDS 1434810 1435787 . - 0 ID=cds-WP_003406613.1;Parent=gene-AL55_RS12250;Dbxref=GenBank:WP_003406613.1;Name=WP_003406613.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215799.1;locus_tag=AL55_RS12250;product=ABC transporter permease;protein_id=WP_003406613.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1435994 1436485 . + . ID=gene-AL55_RS12255;Name=canA;gbkey=Gene;gene=canA;gene_biotype=protein_coding;locus_tag=AL55_RS12255;old_locus_tag=AL55_01334 NZ_KK316828.1 Protein Homology CDS 1435994 1436485 . + 0 ID=cds-WP_003406616.1;Parent=gene-AL55_RS12255;Dbxref=GenBank:WP_003406616.1;Name=WP_003406616.1;gbkey=CDS;gene=canA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215800.1;locus_tag=AL55_RS12255;product=beta-carbonic anhydrase CanA;protein_id=WP_003406616.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1436579 1437577 . + . ID=gene-AL55_RS12260;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=AL55_RS12260;old_locus_tag=AL55_01335 NZ_KK316828.1 Protein Homology CDS 1436579 1437577 . + 0 ID=cds-WP_003406618.1;Parent=gene-AL55_RS12260;Dbxref=GenBank:WP_003406618.1;Name=WP_003406618.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215801.1;locus_tag=AL55_RS12260;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_003406618.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1437577 1439421 . + . ID=gene-AL55_RS12265;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=AL55_RS12265;old_locus_tag=AL55_01336 NZ_KK316828.1 Protein Homology CDS 1437577 1439421 . + 0 ID=cds-WP_003406621.1;Parent=gene-AL55_RS12265;Dbxref=GenBank:WP_003406621.1;Name=WP_003406621.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215802.1;locus_tag=AL55_RS12265;product=adenylyl-sulfate kinase;protein_id=WP_003406621.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1439475 1439960 . + . ID=gene-AL55_RS12270;Name=AL55_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12270;old_locus_tag=AL55_01337 NZ_KK316828.1 Protein Homology CDS 1439475 1439960 . + 0 ID=cds-WP_003406624.1;Parent=gene-AL55_RS12270;Dbxref=GenBank:WP_003406624.1;Name=WP_003406624.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215803.1;locus_tag=AL55_RS12270;product=Rrf2 family transcriptional regulator;protein_id=WP_003406624.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1440018 1441388 . + . ID=gene-AL55_RS12275;Name=AL55_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12275;old_locus_tag=AL55_01338 NZ_KK316828.1 Protein Homology CDS 1440018 1441388 . + 0 ID=cds-WP_031654254.1;Parent=gene-AL55_RS12275;Dbxref=GenBank:WP_031654254.1;Name=WP_031654254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215804.1;locus_tag=AL55_RS12275;product=esterase;protein_id=WP_031654254.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1441437 1442069 . + . ID=gene-AL55_RS12280;Name=AL55_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12280;old_locus_tag=AL55_01339 NZ_KK316828.1 Protein Homology CDS 1441437 1442069 . + 0 ID=cds-WP_003406626.1;Parent=gene-AL55_RS12280;Dbxref=GenBank:WP_003406626.1;Name=WP_003406626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215805.1;locus_tag=AL55_RS12280;product=hypothetical protein;protein_id=WP_003406626.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1442152 1443717 . - . ID=gene-AL55_RS12285;Name=AL55_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12285;old_locus_tag=AL55_01340 NZ_KK316828.1 Protein Homology CDS 1442152 1443717 . - 0 ID=cds-WP_003406627.1;Parent=gene-AL55_RS12285;Dbxref=GenBank:WP_003406627.1;Name=WP_003406627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215806.1;locus_tag=AL55_RS12285;product=DUF2254 domain-containing protein;protein_id=WP_003406627.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1443728 1444042 . + . ID=gene-AL55_RS12290;Name=AL55_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12290;old_locus_tag=AL55_01341 NZ_KK316828.1 Protein Homology CDS 1443728 1444042 . + 0 ID=cds-WP_003406628.1;Parent=gene-AL55_RS12290;Dbxref=GenBank:WP_003406628.1;Name=WP_003406628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177642.1;locus_tag=AL55_RS12290;product=hypothetical protein;protein_id=WP_003406628.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1444169 1444504 . - . ID=gene-AL55_RS12295;Name=AL55_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12295;old_locus_tag=AL55_01342 NZ_KK316828.1 Protein Homology CDS 1444169 1444504 . - 0 ID=cds-WP_003406629.1;Parent=gene-AL55_RS12295;Dbxref=GenBank:WP_003406629.1;Name=WP_003406629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215807.1;locus_tag=AL55_RS12295;product=DUF732 domain-containing protein;protein_id=WP_003406629.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1444863 1444935 . - . ID=gene-AL55_RS12300;Name=AL55_RS12300;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS12300;old_locus_tag=AL55_01343 NZ_KK316828.1 tRNAscan-SE tRNA 1444863 1444935 . - . ID=rna-AL55_RS12300;Parent=gene-AL55_RS12300;anticodon=(pos:complement(1444900..1444902));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS12300;product=tRNA-Arg NZ_KK316828.1 tRNAscan-SE exon 1444863 1444935 . - . ID=exon-AL55_RS12300-1;Parent=rna-AL55_RS12300;anticodon=(pos:complement(1444900..1444902));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS12300;product=tRNA-Arg NZ_KK316828.1 RefSeq gene 1445049 1446701 . + . ID=gene-AL55_RS12305;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AL55_RS12305;old_locus_tag=AL55_01344 NZ_KK316828.1 Protein Homology CDS 1445049 1446701 . + 0 ID=cds-WP_003406630.1;Parent=gene-AL55_RS12305;Dbxref=GenBank:WP_003406630.1;Name=WP_003406630.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215808.1;locus_tag=AL55_RS12305;product=arginine--tRNA ligase;protein_id=WP_003406630.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1446698 1448041 . + . ID=gene-AL55_RS12310;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=AL55_RS12310;old_locus_tag=AL55_01345 NZ_KK316828.1 Protein Homology CDS 1446698 1448041 . + 0 ID=cds-WP_003406632.1;Parent=gene-AL55_RS12310;Dbxref=GenBank:WP_003406632.1;Name=WP_003406632.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215809.1;locus_tag=AL55_RS12310;product=diaminopimelate decarboxylase;protein_id=WP_003406632.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1448045 1449370 . + . ID=gene-AL55_RS12315;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AL55_RS12315;old_locus_tag=AL55_01346 NZ_KK316828.1 Protein Homology CDS 1448045 1449370 . + 0 ID=cds-WP_003406648.1;Parent=gene-AL55_RS12315;Dbxref=GenBank:WP_003406648.1;Name=WP_003406648.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;gene=thrA;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215810.1;locus_tag=AL55_RS12315;product=homoserine dehydrogenase;protein_id=WP_003406648.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1449367 1450449 . + . ID=gene-AL55_RS12320;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=AL55_RS12320;old_locus_tag=AL55_01347 NZ_KK316828.1 Protein Homology CDS 1449367 1450449 . + 0 ID=cds-WP_009940140.1;Parent=gene-AL55_RS12320;Dbxref=GenBank:WP_009940140.1;Name=WP_009940140.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215811.1;locus_tag=AL55_RS12320;product=threonine synthase;protein_id=WP_009940140.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1450553 1451503 . + . ID=gene-AL55_RS12325;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=AL55_RS12325;old_locus_tag=AL55_01348 NZ_KK316828.1 Protein Homology CDS 1450553 1451503 . + 0 ID=cds-WP_003406654.1;Parent=gene-AL55_RS12325;Dbxref=GenBank:WP_003406654.1;Name=WP_003406654.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215812.1;locus_tag=AL55_RS12325;product=homoserine kinase;protein_id=WP_003406654.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1451760 1453568 . + . ID=gene-AL55_RS12330;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AL55_RS12330;old_locus_tag=AL55_01349 NZ_KK316828.1 Protein Homology CDS 1451760 1453568 . + 0 ID=cds-WP_003898814.1;Parent=gene-AL55_RS12330;Dbxref=GenBank:WP_003898814.1;Name=WP_003898814.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215813.1;locus_tag=AL55_RS12330;product=transcription termination factor Rho;protein_id=WP_003898814.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1453719 1453961 . + . ID=gene-AL55_RS12335;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AL55_RS12335;old_locus_tag=AL55_01350 NZ_KK316828.1 Protein Homology CDS 1453719 1453961 . + 0 ID=cds-WP_003406668.1;Parent=gene-AL55_RS12335;Dbxref=GenBank:WP_003406668.1;Name=WP_003406668.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215814.1;locus_tag=AL55_RS12335;product=50S ribosomal protein L31;protein_id=WP_003406668.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1454051 1455124 . + . ID=gene-AL55_RS12340;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AL55_RS12340;old_locus_tag=AL55_01351 NZ_KK316828.1 Protein Homology CDS 1454051 1455124 . + 0 ID=cds-WP_003406670.1;Parent=gene-AL55_RS12340;Dbxref=GenBank:WP_003406670.1;Name=WP_003406670.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215815.1;locus_tag=AL55_RS12340;product=peptide chain release factor 1;protein_id=WP_003406670.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1455184 1456098 . + . ID=gene-AL55_RS12345;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=AL55_RS12345;old_locus_tag=AL55_01352 NZ_KK316828.1 Protein Homology CDS 1455184 1456098 . + 0 ID=cds-WP_003917449.1;Parent=gene-AL55_RS12345;Dbxref=GenBank:WP_003917449.1;Name=WP_003917449.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003922247.1;locus_tag=AL55_RS12345;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_003917449.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1456114 1456767 . + . ID=gene-AL55_RS12350;Name=AL55_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12350;old_locus_tag=AL55_01353 NZ_KK316828.1 Protein Homology CDS 1456114 1456767 . + 0 ID=cds-WP_003898815.1;Parent=gene-AL55_RS12350;Dbxref=GenBank:WP_003898815.1;Name=WP_003898815.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215817.1;locus_tag=AL55_RS12350;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_003898815.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1456851 1458065 . + . ID=gene-AL55_RS12355;Name=rfe;gbkey=Gene;gene=rfe;gene_biotype=protein_coding;locus_tag=AL55_RS12355;old_locus_tag=AL55_01354 NZ_KK316828.1 Protein Homology CDS 1456851 1458065 . + 0 ID=cds-WP_003898816.1;Parent=gene-AL55_RS12355;Dbxref=GenBank:WP_003898816.1;Name=WP_003898816.1;gbkey=CDS;gene=rfe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215818.1;locus_tag=AL55_RS12355;product=UDP-N-acetylglucosamine--decaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_003898816.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1458322 1458807 . + . ID=gene-AL55_RS12360;Name=AL55_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12360;old_locus_tag=AL55_01355 NZ_KK316828.1 Protein Homology CDS 1458322 1458807 . + 0 ID=cds-WP_003406680.1;Parent=gene-AL55_RS12360;Dbxref=GenBank:WP_003406680.1;Name=WP_003406680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215819.1;locus_tag=AL55_RS12360;product=ATP synthase subunit I;protein_id=WP_003406680.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1458800 1459552 . + . ID=gene-AL55_RS12365;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AL55_RS12365;old_locus_tag=AL55_01356 NZ_KK316828.1 Protein Homology CDS 1458800 1459552 . + 0 ID=cds-WP_003406681.1;Parent=gene-AL55_RS12365;Dbxref=GenBank:WP_003406681.1;Name=WP_003406681.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215820.1;locus_tag=AL55_RS12365;product=F0F1 ATP synthase subunit A;protein_id=WP_003406681.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1459601 1459846 . + . ID=gene-AL55_RS12370;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=AL55_RS12370;old_locus_tag=AL55_01357 NZ_KK316828.1 Protein Homology CDS 1459601 1459846 . + 0 ID=cds-WP_003406686.1;Parent=gene-AL55_RS12370;Dbxref=GenBank:WP_003406686.1;Name=WP_003406686.1;gbkey=CDS;gene=atpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215821.1;locus_tag=AL55_RS12370;product=F0F1 ATP synthase subunit C;protein_id=WP_003406686.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1459877 1460392 . + . ID=gene-AL55_RS12375;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=AL55_RS12375;old_locus_tag=AL55_01358 NZ_KK316828.1 Protein Homology CDS 1459877 1460392 . + 0 ID=cds-WP_003898818.1;Parent=gene-AL55_RS12375;Dbxref=GenBank:WP_003898818.1;Name=WP_003898818.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpF;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215822.1;locus_tag=AL55_RS12375;product=F0F1 ATP synthase subunit B;protein_id=WP_003898818.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1460399 1461739 . + . ID=gene-AL55_RS12380;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=AL55_RS12380;old_locus_tag=AL55_01359 NZ_KK316828.1 Protein Homology CDS 1460399 1461739 . + 0 ID=cds-WP_003406697.1;Parent=gene-AL55_RS12380;Dbxref=GenBank:WP_003406697.1;Name=WP_003406697.1;gbkey=CDS;gene=atpH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215823.1;locus_tag=AL55_RS12380;product=F0F1 ATP synthase subunit B/delta;protein_id=WP_003406697.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1461784 1463433 . + . ID=gene-AL55_RS12385;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AL55_RS12385;old_locus_tag=AL55_01360 NZ_KK316828.1 Protein Homology CDS 1461784 1463433 . + 0 ID=cds-WP_003406699.1;Parent=gene-AL55_RS12385;Dbxref=GenBank:WP_003406699.1;Name=WP_003406699.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215824.1;locus_tag=AL55_RS12385;product=F0F1 ATP synthase subunit alpha;protein_id=WP_003406699.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1463440 1464357 . + . ID=gene-AL55_RS12390;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=AL55_RS12390;old_locus_tag=AL55_01361 NZ_KK316828.1 Protein Homology CDS 1463440 1464357 . + 0 ID=cds-WP_003898819.1;Parent=gene-AL55_RS12390;Dbxref=GenBank:WP_003898819.1;Name=WP_003898819.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215825.1;locus_tag=AL55_RS12390;product=F0F1 ATP synthase subunit gamma;protein_id=WP_003898819.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1464397 1465857 . + . ID=gene-AL55_RS12395;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AL55_RS12395;old_locus_tag=AL55_01362 NZ_KK316828.1 Protein Homology CDS 1464397 1465857 . + 0 ID=cds-WP_003406701.1;Parent=gene-AL55_RS12395;Dbxref=GenBank:WP_003406701.1;Name=WP_003406701.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215826.1;locus_tag=AL55_RS12395;product=F0F1 ATP synthase subunit beta;protein_id=WP_003406701.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1465871 1466236 . + . ID=gene-AL55_RS12400;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AL55_RS12400;old_locus_tag=AL55_01363 NZ_KK316828.1 Protein Homology CDS 1465871 1466236 . + 0 ID=cds-WP_003406708.1;Parent=gene-AL55_RS12400;Dbxref=GenBank:WP_003406708.1;Name=WP_003406708.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpC;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215827.1;locus_tag=AL55_RS12400;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_003406708.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1466244 1466687 . + . ID=gene-AL55_RS12405;Name=AL55_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12405;old_locus_tag=AL55_01364 NZ_KK316828.1 Protein Homology CDS 1466244 1466687 . + 0 ID=cds-WP_003406722.1;Parent=gene-AL55_RS12405;Dbxref=GenBank:WP_003406722.1;Name=WP_003406722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215828.1;locus_tag=AL55_RS12405;product=DUF2550 domain-containing protein;protein_id=WP_003406722.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1466727 1468061 . - . ID=gene-AL55_RS12410;Name=AL55_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12410;old_locus_tag=AL55_01365 NZ_KK316828.1 Protein Homology CDS 1466727 1468061 . - 0 ID=cds-WP_003900311.1;Parent=gene-AL55_RS12410;Dbxref=GenBank:WP_003900311.1;Name=WP_003900311.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215829.1;locus_tag=AL55_RS12410;product=ISL3-like element IS1557 family transposase;protein_id=WP_003900311.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1468227 1468808 . - . ID=gene-AL55_RS12415;Name=AL55_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12415;old_locus_tag=AL55_01366 NZ_KK316828.1 Protein Homology CDS 1468227 1468808 . - 0 ID=cds-WP_003406839.1;Parent=gene-AL55_RS12415;Dbxref=GenBank:WP_003406839.1;Name=WP_003406839.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215830.1;locus_tag=AL55_RS12415;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_003406839.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1468877 1470133 . + . ID=gene-AL55_RS12420;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=AL55_RS12420;old_locus_tag=AL55_01367 NZ_KK316828.1 Protein Homology CDS 1468877 1470133 . + 0 ID=cds-WP_003406845.1;Parent=gene-AL55_RS12420;Dbxref=GenBank:WP_003406845.1;Name=WP_003406845.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215831.1;locus_tag=AL55_RS12420;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_003406845.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1470405 1471936 . + . ID=gene-AL55_RS12425;Name=AL55_RS12425;gbkey=Gene;gene_biotype=rRNA;locus_tag=AL55_RS12425;old_locus_tag=AL55_01368 NZ_KK316828.1 cmsearch rRNA 1470405 1471936 . + . ID=rna-AL55_RS12425;Parent=gene-AL55_RS12425;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL55_RS12425;product=16S ribosomal RNA NZ_KK316828.1 cmsearch exon 1470405 1471936 . + . ID=exon-AL55_RS12425-1;Parent=rna-AL55_RS12425;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL55_RS12425;product=16S ribosomal RNA NZ_KK316828.1 RefSeq gene 1472214 1475351 . + . ID=gene-AL55_RS12430;Name=AL55_RS12430;gbkey=Gene;gene_biotype=rRNA;locus_tag=AL55_RS12430;old_locus_tag=AL55_01369 NZ_KK316828.1 cmsearch rRNA 1472214 1475351 . + . ID=rna-AL55_RS12430;Parent=gene-AL55_RS12430;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL55_RS12430;product=23S ribosomal RNA NZ_KK316828.1 cmsearch exon 1472214 1475351 . + . ID=exon-AL55_RS12430-1;Parent=rna-AL55_RS12430;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL55_RS12430;product=23S ribosomal RNA NZ_KK316828.1 RefSeq gene 1475456 1475568 . + . ID=gene-AL55_RS12435;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AL55_RS12435;old_locus_tag=AL55_01370 NZ_KK316828.1 cmsearch rRNA 1475456 1475568 . + . ID=rna-AL55_RS12435;Parent=gene-AL55_RS12435;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL55_RS12435;product=5S ribosomal RNA NZ_KK316828.1 cmsearch exon 1475456 1475568 . + . ID=exon-AL55_RS12435-1;Parent=rna-AL55_RS12435;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL55_RS12435;product=5S ribosomal RNA NZ_KK316828.1 RefSeq gene 1475690 1476187 . - . ID=gene-AL55_RS12440;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=AL55_RS12440;old_locus_tag=AL55_01371 NZ_KK316828.1 Protein Homology CDS 1475690 1476187 . - 0 ID=cds-WP_003406857.1;Parent=gene-AL55_RS12440;Dbxref=GenBank:WP_003406857.1;Name=WP_003406857.1;gbkey=CDS;gene=ogt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215832.1;locus_tag=AL55_RS12440;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=WP_003406857.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1476184 1477674 . - . ID=gene-AL55_RS12445;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=AL55_RS12445;old_locus_tag=AL55_01372 NZ_KK316828.1 Protein Homology CDS 1476184 1477674 . - 0 ID=cds-WP_003406860.1;Parent=gene-AL55_RS12445;Dbxref=GenBank:WP_003406860.1;Name=WP_003406860.1;gbkey=CDS;gene=alkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215833.1;locus_tag=AL55_RS12445;product=bifunctional regulatory protein/DNA repair enzyme AlkA;protein_id=WP_003406860.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1477755 1479380 . - . ID=gene-AL55_RS12450;Name=AL55_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12450;old_locus_tag=AL55_01373 NZ_KK316828.1 Protein Homology CDS 1477755 1479380 . - 0 ID=cds-WP_003406864.1;Parent=gene-AL55_RS12450;Dbxref=GenBank:WP_003406864.1;Name=WP_003406864.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215834.1;locus_tag=AL55_RS12450;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003406864.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1479450 1481057 . - . ID=gene-AL55_RS12455;Name=AL55_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12455;old_locus_tag=AL55_01374 NZ_KK316828.1 Protein Homology CDS 1479450 1481057 . - 0 ID=cds-WP_003406867.1;Parent=gene-AL55_RS12455;Dbxref=GenBank:WP_003406867.1;Name=WP_003406867.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215835.1;locus_tag=AL55_RS12455;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003406867.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1481070 1482773 . - . ID=gene-AL55_RS12460;Name=AL55_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12460;old_locus_tag=AL55_01375 NZ_KK316828.1 Protein Homology CDS 1481070 1482773 . - 0 ID=cds-WP_003898821.1;Parent=gene-AL55_RS12460;Dbxref=GenBank:WP_003898821.1;Name=WP_003898821.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215836.1;locus_tag=AL55_RS12460;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003898821.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1482844 1483515 . + . ID=gene-AL55_RS12465;Name=nucS;gbkey=Gene;gene=nucS;gene_biotype=protein_coding;locus_tag=AL55_RS12465;old_locus_tag=AL55_01376 NZ_KK316828.1 Protein Homology CDS 1482844 1483515 . + 0 ID=cds-WP_003406872.1;Parent=gene-AL55_RS12465;Dbxref=GenBank:WP_003406872.1;Name=WP_003406872.1;Ontology_term=GO:0004519;gbkey=CDS;gene=nucS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011893218.1;locus_tag=AL55_RS12465;product=endonuclease NucS;protein_id=WP_003406872.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1483538 1483834 . + . ID=gene-AL55_RS12470;Name=AL55_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12470;old_locus_tag=AL55_01377 NZ_KK316828.1 Protein Homology CDS 1483538 1483834 . + 0 ID=cds-WP_003898823.1;Parent=gene-AL55_RS12470;Dbxref=GenBank:WP_003898823.1;Name=WP_003898823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215838.1;locus_tag=AL55_RS12470;product=hypothetical protein;protein_id=WP_003898823.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1483869 1484327 . - . ID=gene-AL55_RS12475;Name=mce;gbkey=Gene;gene=mce;gene_biotype=protein_coding;locus_tag=AL55_RS12475;old_locus_tag=AL55_01378 NZ_KK316828.1 Protein Homology CDS 1483869 1484327 . - 0 ID=cds-WP_003406879.1;Parent=gene-AL55_RS12475;Dbxref=GenBank:WP_003406879.1;Name=WP_003406879.1;gbkey=CDS;gene=mce;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177643.1;locus_tag=AL55_RS12475;product=methylmalonyl-CoA epimerase;protein_id=WP_003406879.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1484406 1485587 . + . ID=gene-AL55_RS12480;Name=AL55_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12480;old_locus_tag=AL55_01379 NZ_KK316828.1 Protein Homology CDS 1484406 1485587 . + 0 ID=cds-WP_023637385.1;Parent=gene-AL55_RS12480;Dbxref=GenBank:WP_023637385.1;Name=WP_023637385.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020726153.1;locus_tag=AL55_RS12480;product=acetyl-CoA C-acetyltransferase;protein_id=WP_023637385.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1485717 1486631 . + . ID=gene-AL55_RS12485;Name=AL55_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12485;old_locus_tag=AL55_01380 NZ_KK316828.1 Protein Homology CDS 1485717 1486631 . + 0 ID=cds-WP_003406887.1;Parent=gene-AL55_RS12485;Dbxref=GenBank:WP_003406887.1;Name=WP_003406887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215840.1;locus_tag=AL55_RS12485;product=thioredoxin family protein;protein_id=WP_003406887.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1486710 1488485 . - . ID=gene-AL55_RS12490;Name=AL55_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12490;old_locus_tag=AL55_01381 NZ_KK316828.1 Protein Homology CDS 1486710 1488485 . - 0 ID=cds-WP_014584742.1;Parent=gene-AL55_RS12490;Dbxref=GenBank:WP_014584742.1;Name=WP_014584742.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177799.1;locus_tag=AL55_RS12490;product=PE family protein;protein_id=WP_014584742.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1488637 1490832 . - . ID=gene-AL55_RS12495;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=AL55_RS12495;old_locus_tag=AL55_01382 NZ_KK316828.1 Protein Homology CDS 1488637 1490832 . - 0 ID=cds-WP_003901134.1;Parent=gene-AL55_RS12495;Dbxref=GenBank:WP_003901134.1;Name=WP_003901134.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215842.1;locus_tag=AL55_RS12495;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_003901134.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1490840 1492906 . - . ID=gene-AL55_RS12500;Name=glgE;gbkey=Gene;gene=glgE;gene_biotype=protein_coding;locus_tag=AL55_RS12500;old_locus_tag=AL55_01383 NZ_KK316828.1 Protein Homology CDS 1490840 1492906 . - 0 ID=cds-WP_003915171.1;Parent=gene-AL55_RS12500;Dbxref=GenBank:WP_003915171.1;Name=WP_003915171.1;gbkey=CDS;gene=glgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915171.1;locus_tag=AL55_RS12500;product=alpha-1%2C4-glucan:maltose-1-phosphate maltosyltransferase;protein_id=WP_003915171.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1493084 1495675 . + . ID=gene-AL55_RS12505;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=AL55_RS12505;old_locus_tag=AL55_01384 NZ_KK316828.1 Protein Homology CDS 1493084 1495675 . + 0 ID=cds-WP_003901135.1;Parent=gene-AL55_RS12505;Dbxref=GenBank:WP_003901135.1;Name=WP_003901135.1;gbkey=CDS;gene=glgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215844.1;locus_tag=AL55_RS12505;product=glycosyltransferase family 1 protein;protein_id=WP_003901135.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1495715 1497709 . - . ID=gene-AL55_RS12510;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=AL55_RS12510;old_locus_tag=AL55_01385 NZ_KK316828.1 Protein Homology CDS 1495715 1497709 . - 0 ID=cds-WP_003901136.1;Parent=gene-AL55_RS12510;Dbxref=GenBank:WP_003901136.1;Name=WP_003901136.1;gbkey=CDS;gene=dinG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215845.1;locus_tag=AL55_RS12510;product=ATP-dependent helicase DinG;protein_id=WP_003901136.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1497733 1499079 . - . ID=gene-AL55_RS12515;Name=AL55_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12515;old_locus_tag=AL55_01386 NZ_KK316828.1 Protein Homology CDS 1497733 1499079 . - 0 ID=cds-WP_003900321.1;Parent=gene-AL55_RS12515;Dbxref=GenBank:WP_003900321.1;Name=WP_003900321.1;Ontology_term=GO:0009435,GO:0004514,GO:0004516;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA,nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215846.2;locus_tag=AL55_RS12515;product=nicotinate phosphoribosyltransferase;protein_id=WP_003900321.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1499181 1499486 . + . ID=gene-AL55_RS12520;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=AL55_RS12520;old_locus_tag=AL55_01387 NZ_KK316828.1 Protein Homology CDS 1499181 1499486 . + 0 ID=cds-WP_003406906.1;Parent=gene-AL55_RS12520;Dbxref=GenBank:WP_003406906.1;Name=WP_003406906.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215847.1;locus_tag=AL55_RS12520;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_003406906.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1499512 1500102 . + . ID=gene-AL55_RS12525;Name=AL55_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12525;old_locus_tag=AL55_01388 NZ_KK316828.1 Protein Homology CDS 1499512 1500102 . + 0 ID=cds-WP_003406907.1;Parent=gene-AL55_RS12525;Dbxref=GenBank:WP_003406907.1;Name=WP_003406907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008254882.1;locus_tag=AL55_RS12525;product=oxidative stress transcriptional regulator AosR;protein_id=WP_003406907.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1500119 1501153 . + . ID=gene-AL55_RS12530;Name=AL55_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12530;old_locus_tag=AL55_01389 NZ_KK316828.1 Protein Homology CDS 1500119 1501153 . + 0 ID=cds-WP_003406908.1;Parent=gene-AL55_RS12530;Dbxref=GenBank:WP_003406908.1;Name=WP_003406908.1;Ontology_term=GO:0006508,GO:0004177;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215849.1;locus_tag=AL55_RS12530;product=P1 family peptidase;protein_id=WP_003406908.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1501161 1501601 . + . ID=gene-AL55_RS12535;Name=mec;gbkey=Gene;gene=mec;gene_biotype=protein_coding;locus_tag=AL55_RS12535;old_locus_tag=AL55_01390 NZ_KK316828.1 Protein Homology CDS 1501161 1501601 . + 0 ID=cds-WP_003898830.1;Parent=gene-AL55_RS12535;Dbxref=GenBank:WP_003898830.1;Name=WP_003898830.1;gbkey=CDS;gene=mec;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215850.1;locus_tag=AL55_RS12535;product=CysO-cysteine peptidase;protein_id=WP_003898830.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1501623 1501904 . + . ID=gene-AL55_RS12540;Name=cysO;gbkey=Gene;gene=cysO;gene_biotype=protein_coding;locus_tag=AL55_RS12540;old_locus_tag=AL55_01391 NZ_KK316828.1 Protein Homology CDS 1501623 1501904 . + 0 ID=cds-WP_003406910.1;Parent=gene-AL55_RS12540;Dbxref=GenBank:WP_003406910.1;Name=WP_003406910.1;gbkey=CDS;gene=cysO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215851.1;locus_tag=AL55_RS12540;product=sulfur carrier protein CysO;protein_id=WP_003406910.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1501914 1502885 . + . ID=gene-AL55_RS12545;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=AL55_RS12545;old_locus_tag=AL55_01392 NZ_KK316828.1 Protein Homology CDS 1501914 1502885 . + 0 ID=cds-WP_003406912.1;Parent=gene-AL55_RS12545;Dbxref=GenBank:WP_003406912.1;Name=WP_003406912.1;gbkey=CDS;gene=cysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215852.1;locus_tag=AL55_RS12545;product=O-phosphoserine sulfhydrylase;protein_id=WP_003406912.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1502876 1503598 . + . ID=gene-AL55_RS12550;Name=AL55_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12550;old_locus_tag=AL55_01393 NZ_KK316828.1 Protein Homology CDS 1502876 1503598 . + 0 ID=cds-WP_003898831.1;Parent=gene-AL55_RS12550;Dbxref=GenBank:WP_003898831.1;Name=WP_003898831.1;Ontology_term=GO:0006508,GO:0004252,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215853.1;locus_tag=AL55_RS12550;product=rhomboid family intramembrane serine protease;protein_id=WP_003898831.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1503595 1504410 . + . ID=gene-AL55_RS12555;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AL55_RS12555;old_locus_tag=AL55_01394 NZ_KK316828.1 Protein Homology CDS 1503595 1504410 . + 0 ID=cds-WP_003406919.1;Parent=gene-AL55_RS12555;Dbxref=GenBank:WP_003406919.1;Name=WP_003406919.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215854.1;locus_tag=AL55_RS12555;product=glutamate racemase;protein_id=WP_003406919.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1504482 1505258 . + . ID=gene-AL55_RS12560;Name=AL55_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12560;old_locus_tag=AL55_01395 NZ_KK316828.1 Protein Homology CDS 1504482 1505258 . + 0 ID=cds-WP_009936344.1;Parent=gene-AL55_RS12560;Dbxref=GenBank:WP_009936344.1;Name=WP_009936344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936344.1;locus_tag=AL55_RS12560;product=cyclic nucleotide-degrading phosphodiesterase;protein_id=WP_009936344.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1505275 1506054 . + . ID=gene-AL55_RS12565;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AL55_RS12565;old_locus_tag=AL55_01396 NZ_KK316828.1 Protein Homology CDS 1505275 1506054 . + 0 ID=cds-WP_003406926.1;Parent=gene-AL55_RS12565;Dbxref=GenBank:WP_003406926.1;Name=WP_003406926.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215856.1;locus_tag=AL55_RS12565;product=ribonuclease PH;protein_id=WP_003406926.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1506093 1506707 . + . ID=gene-AL55_RS12570;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=AL55_RS12570;old_locus_tag=AL55_01397 NZ_KK316828.1 Protein Homology CDS 1506093 1506707 . + 0 ID=cds-WP_003406931.1;Parent=gene-AL55_RS12570;Dbxref=GenBank:WP_003406931.1;Name=WP_003406931.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215857.1;locus_tag=AL55_RS12570;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_003406931.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1506704 1507066 . - . ID=gene-AL55_RS12575;Name=AL55_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12575;old_locus_tag=AL55_01398 NZ_KK316828.1 Protein Homology CDS 1506704 1507066 . - 0 ID=cds-WP_003406937.1;Parent=gene-AL55_RS12575;Dbxref=GenBank:WP_003406937.1;Name=WP_003406937.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177800.1;locus_tag=AL55_RS12575;product=DUF3817 domain-containing protein;protein_id=WP_003406937.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1507063 1507443 . - . ID=gene-AL55_RS12580;Name=AL55_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12580;old_locus_tag=AL55_01399 NZ_KK316828.1 Protein Homology CDS 1507063 1507443 . - 0 ID=cds-WP_003898833.1;Parent=gene-AL55_RS12580;Dbxref=GenBank:WP_003898833.1;Name=WP_003898833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215859.1;locus_tag=AL55_RS12580;product=hypothetical protein;protein_id=WP_003898833.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1507554 1507808 . + . ID=gene-AL55_RS0104655;Name=AL55_RS0104655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104655;old_locus_tag=AL55_01400 NZ_KK316828.1 Protein Homology CDS 1507554 1507808 . + 0 ID=cds-WP_003911484.1;Parent=gene-AL55_RS0104655;Dbxref=GenBank:WP_003911484.1;Name=WP_003911484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911484.1;locus_tag=AL55_RS0104655;product=acyl carrier protein;protein_id=WP_003911484.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1507801 1509366 . + . ID=gene-AL55_RS12585;Name=mbtM;gbkey=Gene;gene=mbtM;gene_biotype=protein_coding;locus_tag=AL55_RS12585;old_locus_tag=AL55_01401 NZ_KK316828.1 Protein Homology CDS 1507801 1509366 . + 0 ID=cds-WP_003406950.1;Parent=gene-AL55_RS12585;Dbxref=GenBank:WP_003406950.1;Name=WP_003406950.1;gbkey=CDS;gene=mbtM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215861.1;locus_tag=AL55_RS12585;product=long-chain-fatty acid--ACP ligase MbtM;protein_id=WP_003406950.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1509366 1510526 . + . ID=gene-AL55_RS12590;Name=mbtN;gbkey=Gene;gene=mbtN;gene_biotype=protein_coding;locus_tag=AL55_RS12590;old_locus_tag=AL55_01402 NZ_KK316828.1 Protein Homology CDS 1509366 1510526 . + 0 ID=cds-WP_003406953.1;Parent=gene-AL55_RS12590;Dbxref=GenBank:WP_003406953.1;Name=WP_003406953.1;gbkey=CDS;gene=mbtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215862.1;locus_tag=AL55_RS12590;product=acyl-ACP dehydrogenase MbtN;protein_id=WP_003406953.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1510493 1511125 . - . ID=gene-AL55_RS12595;Name=mbtK;gbkey=Gene;gene=mbtK;gene_biotype=protein_coding;locus_tag=AL55_RS12595;old_locus_tag=AL55_01403 NZ_KK316828.1 Protein Homology CDS 1510493 1511125 . - 0 ID=cds-WP_003406956.1;Parent=gene-AL55_RS12595;Dbxref=GenBank:WP_003406956.1;Name=WP_003406956.1;gbkey=CDS;gene=mbtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215863.1;locus_tag=AL55_RS12595;product=lysine N-acyltransferase MbtK;protein_id=WP_003406956.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1511248 1511331 . + . ID=gene-AL55_RS12600;Name=AL55_RS12600;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS12600;old_locus_tag=AL55_01404 NZ_KK316828.1 tRNAscan-SE tRNA 1511248 1511331 . + . ID=rna-AL55_RS12600;Parent=gene-AL55_RS12600;anticodon=(pos:1511282..1511284);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS12600;product=tRNA-Leu NZ_KK316828.1 tRNAscan-SE exon 1511248 1511331 . + . ID=exon-AL55_RS12600-1;Parent=rna-AL55_RS12600;anticodon=(pos:1511282..1511284);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS12600;product=tRNA-Leu NZ_KK316828.1 RefSeq gene 1511567 1514146 . + . ID=gene-AL55_RS12605;Name=irtA;gbkey=Gene;gene=irtA;gene_biotype=protein_coding;locus_tag=AL55_RS12605;old_locus_tag=AL55_01405 NZ_KK316828.1 Protein Homology CDS 1511567 1514146 . + 0 ID=cds-WP_003406958.1;Parent=gene-AL55_RS12605;Dbxref=GenBank:WP_003406958.1;Name=WP_003406958.1;gbkey=CDS;gene=irtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215864.1;locus_tag=AL55_RS12605;product=iron ABC transporter ATP-binding protein/permease IrtA;protein_id=WP_003406958.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1514143 1515882 . + . ID=gene-AL55_RS12610;Name=irtB;gbkey=Gene;gene=irtB;gene_biotype=protein_coding;locus_tag=AL55_RS12610;old_locus_tag=AL55_01406 NZ_KK316828.1 Protein Homology CDS 1514143 1515882 . + 0 ID=cds-WP_003900322.1;Parent=gene-AL55_RS12610;Dbxref=GenBank:WP_003900322.1;Name=WP_003900322.1;gbkey=CDS;gene=irtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215865.1;locus_tag=AL55_RS12610;product=iron ABC transporter ATP-binding protein/permease IrtB;protein_id=WP_003900322.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1515875 1516045 . - . ID=gene-AL55_RS25845;Name=AL55_RS25845;end_range=1516045,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25845;partial=true;pseudo=true;start_range=.,1515875 NZ_KK316828.1 Protein Homology CDS 1515875 1516045 . - 0 ID=cds-AL55_RS25845;Parent=gene-AL55_RS25845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016627;end_range=1516045,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009952867.1;locus_tag=AL55_RS25845;partial=true;product=acyl-CoA dehydrogenase family protein;pseudo=true;start_range=.,1515875;transl_table=11 NZ_KK316828.1 RefSeq gene 1516011 1516754 . + . ID=gene-AL55_RS12615;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AL55_RS12615;old_locus_tag=AL55_01407 NZ_KK316828.1 Protein Homology CDS 1516011 1516754 . + 0 ID=cds-WP_003406963.1;Parent=gene-AL55_RS12615;Dbxref=GenBank:WP_003406963.1;Name=WP_003406963.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215866.1;locus_tag=AL55_RS12615;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_003406963.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1516765 1516827 . + . ID=gene-AL55_RS28015;Name=AL55_RS28015;end_range=1516827,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28015;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 1516765 1516827 . + 0 ID=cds-AL55_RS28015;Parent=gene-AL55_RS28015;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1516827,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014790.6;locus_tag=AL55_RS28015;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1516808 1517080 . + . ID=gene-AL55_RS12620;Name=AL55_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12620;old_locus_tag=AL55_01408 NZ_KK316828.1 Protein Homology CDS 1516808 1517080 . + 0 ID=cds-WP_003918231.1;Parent=gene-AL55_RS12620;Dbxref=GenBank:WP_003918231.1;Name=WP_003918231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918231.1;locus_tag=AL55_RS12620;product=hypothetical protein;protein_id=WP_003918231.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1517283 1517654 . + . ID=gene-AL55_RS12625;Name=AL55_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12625;old_locus_tag=AL55_01409 NZ_KK316828.1 Protein Homology CDS 1517283 1517654 . + 0 ID=cds-WP_003406967.1;Parent=gene-AL55_RS12625;Dbxref=GenBank:WP_003406967.1;Name=WP_003406967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215868.1;locus_tag=AL55_RS12625;product=hypothetical protein;protein_id=WP_003406967.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1517720 1518505 . - . ID=gene-AL55_RS12630;Name=AL55_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12630;old_locus_tag=AL55_01410 NZ_KK316828.1 Protein Homology CDS 1517720 1518505 . - 0 ID=cds-WP_003898836.1;Parent=gene-AL55_RS12630;Dbxref=GenBank:WP_003898836.1;Name=WP_003898836.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215869.1;locus_tag=AL55_RS12630;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003898836.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1518525 1520396 . - . ID=gene-AL55_RS12635;Name=AL55_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12635;old_locus_tag=AL55_01411 NZ_KK316828.1 Protein Homology CDS 1518525 1520396 . - 0 ID=cds-WP_003898837.1;Parent=gene-AL55_RS12635;Dbxref=GenBank:WP_003898837.1;Name=WP_003898837.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215870.1;locus_tag=AL55_RS12635;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_003898837.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1520405 1522552 . - . ID=gene-AL55_RS12640;Name=moeY;gbkey=Gene;gene=moeY;gene_biotype=protein_coding;locus_tag=AL55_RS12640;old_locus_tag=AL55_01412 NZ_KK316828.1 Protein Homology CDS 1520405 1522552 . - 0 ID=cds-WP_003898838.1;Parent=gene-AL55_RS12640;Dbxref=GenBank:WP_003898838.1;Name=WP_003898838.1;Ontology_term=GO:0016491;gbkey=CDS;gene=moeY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215871.1;locus_tag=AL55_RS12640;product=Rv1355c family protein;protein_id=WP_003898838.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1522549 1523304 . - . ID=gene-AL55_RS12645;Name=AL55_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12645;old_locus_tag=AL55_01413 NZ_KK316828.1 Protein Homology CDS 1522549 1523304 . - 0 ID=cds-WP_003911502.1;Parent=gene-AL55_RS12645;Dbxref=GenBank:WP_003911502.1;Name=WP_003911502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911502.1;locus_tag=AL55_RS12645;product=hypothetical protein;protein_id=WP_003911502.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1523813 1524736 . - . ID=gene-AL55_RS12650;Name=AL55_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12650;old_locus_tag=AL55_01414 NZ_KK316828.1 Protein Homology CDS 1523813 1524736 . - 0 ID=cds-WP_003406987.1;Parent=gene-AL55_RS12650;Dbxref=GenBank:WP_003406987.1;Name=WP_003406987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215873.1;locus_tag=AL55_RS12650;product=cyclic diguanylate phosphodiesterase;protein_id=WP_003406987.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1524756 1524896 . - . ID=gene-AL55_RS27255;Name=AL55_RS27255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27255 NZ_KK316828.1 Protein Homology CDS 1524756 1524896 . - 0 ID=cds-WP_009940161.1;Parent=gene-AL55_RS27255;Dbxref=GenBank:WP_009940161.1;Name=WP_009940161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940161.1;locus_tag=AL55_RS27255;product=hypothetical protein;protein_id=WP_009940161.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1525132 1528611 . + . ID=gene-AL55_RS12655;Name=AL55_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12655;old_locus_tag=AL55_01415 NZ_KK316828.1 Protein Homology CDS 1525132 1528611 . + 0 ID=cds-WP_003901139.1;Parent=gene-AL55_RS12655;Dbxref=GenBank:WP_003901139.1;Name=WP_003901139.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215874.1;locus_tag=AL55_RS12655;product=helix-turn-helix transcriptional regulator;protein_id=WP_003901139.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1528807 1529445 . + . ID=gene-AL55_RS12660;Name=AL55_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12660;old_locus_tag=AL55_01416 NZ_KK316828.1 GeneMarkS-2+ CDS 1528807 1529445 . + 0 ID=cds-WP_194164305.1;Parent=gene-AL55_RS12660;Dbxref=GenBank:WP_194164305.1;Name=WP_194164305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS12660;product=nucleotidyl cyclase domain-containing protein;protein_id=WP_194164305.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1529493 1529729 . - . ID=gene-AL55_RS12665;Name=AL55_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12665 NZ_KK316828.1 Protein Homology CDS 1529493 1529729 . - 0 ID=cds-WP_003407054.1;Parent=gene-AL55_RS12665;Dbxref=GenBank:WP_003407054.1;Name=WP_003407054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627344.1;locus_tag=AL55_RS12665;product=hypothetical protein;protein_id=WP_003407054.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1529868 1530890 . + . ID=gene-AL55_RS12670;Name=AL55_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12670;old_locus_tag=AL55_01417 NZ_KK316828.1 Protein Homology CDS 1529868 1530890 . + 0 ID=cds-WP_003898842.1;Parent=gene-AL55_RS12670;Dbxref=GenBank:WP_003898842.1;Name=WP_003898842.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215876.1;locus_tag=AL55_RS12670;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003898842.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1530963 1532153 . - . ID=gene-AL55_RS12675;Name=AL55_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12675;old_locus_tag=AL55_01418 NZ_KK316828.1 Protein Homology CDS 1530963 1532153 . - 0 ID=cds-WP_003901140.1;Parent=gene-AL55_RS12675;Dbxref=GenBank:WP_003901140.1;Name=WP_003901140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177801.1;locus_tag=AL55_RS12675;product=PPE family protein PPE19;protein_id=WP_003901140.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1532468 1533130 . - . ID=gene-AL55_RS12680;Name=AL55_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12680;old_locus_tag=AL55_01419 NZ_KK316828.1 Protein Homology CDS 1532468 1533130 . - 0 ID=cds-WP_003407152.1;Parent=gene-AL55_RS12680;Dbxref=GenBank:WP_003407152.1;Name=WP_003407152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215878.1;locus_tag=AL55_RS12680;product=membrane protein;protein_id=WP_003407152.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1533127 1533912 . - . ID=gene-AL55_RS12685;Name=AL55_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12685;old_locus_tag=AL55_01420 NZ_KK316828.1 Protein Homology CDS 1533127 1533912 . - 0 ID=cds-WP_003407157.1;Parent=gene-AL55_RS12685;Dbxref=GenBank:WP_003407157.1;Name=WP_003407157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215879.1;locus_tag=AL55_RS12685;product=membrane protein;protein_id=WP_003407157.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1534203 1536164 . - . ID=gene-AL55_RS12690;Name=AL55_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12690;old_locus_tag=AL55_01421 NZ_KK316828.1 Protein Homology CDS 1534203 1536164 . - 0 ID=cds-WP_003407159.1;Parent=gene-AL55_RS12690;Dbxref=GenBank:WP_003407159.1;Name=WP_003407159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177802.1;locus_tag=AL55_RS12690;product=sigma-F factor regulator;protein_id=WP_003407159.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1536303 1536689 . - . ID=gene-AL55_RS12695;Name=rsfA;gbkey=Gene;gene=rsfA;gene_biotype=protein_coding;locus_tag=AL55_RS12695;old_locus_tag=AL55_01422 NZ_KK316828.1 Protein Homology CDS 1536303 1536689 . - 0 ID=cds-WP_003898845.1;Parent=gene-AL55_RS12695;Dbxref=GenBank:WP_003898845.1;Name=WP_003898845.1;gbkey=CDS;gene=rsfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215881.1;locus_tag=AL55_RS12695;product=anti-sigma-F factor antagonist RsfA;protein_id=WP_003898845.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1536910 1537731 . + . ID=gene-AL55_RS12700;Name=AL55_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12700;old_locus_tag=AL55_01423 NZ_KK316828.1 Protein Homology CDS 1536910 1537731 . + 0 ID=cds-WP_003407164.1;Parent=gene-AL55_RS12700;Dbxref=GenBank:WP_003407164.1;Name=WP_003407164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215882.1;locus_tag=AL55_RS12700;product=GTP pyrophosphokinase;protein_id=WP_003407164.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1537724 1537960 . + . ID=gene-AL55_RS12705;Name=AL55_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12705;old_locus_tag=AL55_01424 NZ_KK316828.1 Protein Homology CDS 1537724 1537960 . + 0 ID=cds-WP_003407167.1;Parent=gene-AL55_RS12705;Dbxref=GenBank:WP_003407167.1;Name=WP_003407167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003407167.1;locus_tag=AL55_RS12705;product=hypothetical protein;protein_id=WP_003407167.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1538032 1539237 . - . ID=gene-AL55_RS12710;Name=AL55_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12710;old_locus_tag=AL55_01425 NZ_KK316828.1 Protein Homology CDS 1538032 1539237 . - 0 ID=cds-WP_003918234.1;Parent=gene-AL55_RS12710;Dbxref=GenBank:WP_003918234.1;Name=WP_003918234.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355830.1;locus_tag=AL55_RS12710;product=serine hydrolase domain-containing protein;protein_id=WP_003918234.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1539540 1540325 . + . ID=gene-AL55_RS12715;Name=lprF;gbkey=Gene;gene=lprF;gene_biotype=protein_coding;locus_tag=AL55_RS12715;old_locus_tag=AL55_01426 NZ_KK316828.1 Protein Homology CDS 1539540 1540325 . + 0 ID=cds-WP_003902048.1;Parent=gene-AL55_RS12715;Dbxref=GenBank:WP_003902048.1;Name=WP_003902048.1;gbkey=CDS;gene=lprF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215884.1;locus_tag=AL55_RS12715;product=lipoprotein LprF;protein_id=WP_003902048.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1540521 1541135 . + . ID=gene-AL55_RS0104670;Name=AL55_RS0104670;end_range=1541135,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0104670;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 1540521 1541135 . + 0 ID=cds-AL55_RS0104670;Parent=gene-AL55_RS0104670;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1541135,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215887.1;locus_tag=AL55_RS0104670;partial=true;product=cytochrome b5 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1541177 1542438 . - . ID=gene-AL55_RS12720;Name=AL55_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12720;old_locus_tag=AL55_01427 NZ_KK316828.1 Protein Homology CDS 1542150 1542438 . - 0 ID=cds-WP_087902221.1-3;Parent=gene-AL55_RS12720;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS12720;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 1541177 1542150 . - 2 ID=cds-WP_087902221.1-3;Parent=gene-AL55_RS12720;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS12720;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1542489 1543349 . + . ID=gene-AL55_RS12730;Name=AL55_RS12730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS12730;old_locus_tag=AL55_01429;partial=true;pseudo=true;start_range=.,1542489 NZ_KK316828.1 Protein Homology CDS 1542489 1543349 . + 0 ID=cds-AL55_RS12730;Parent=gene-AL55_RS12730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215887.1;locus_tag=AL55_RS12730;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1542489;transl_table=11 NZ_KK316828.1 RefSeq gene 1543346 1544527 . + . ID=gene-AL55_RS12735;Name=AL55_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12735;old_locus_tag=AL55_01430 NZ_KK316828.1 Protein Homology CDS 1543346 1544527 . + 0 ID=cds-WP_003407185.1;Parent=gene-AL55_RS12735;Dbxref=GenBank:WP_003407185.1;Name=WP_003407185.1;Ontology_term=GO:0030639,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177803.1;locus_tag=AL55_RS12735;product=type III polyketide synthase;protein_id=WP_003407185.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1544533 1545513 . + . ID=gene-AL55_RS12740;Name=AL55_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12740;old_locus_tag=AL55_01431 NZ_KK316828.1 Protein Homology CDS 1544533 1545513 . + 0 ID=cds-WP_003903426.1;Parent=gene-AL55_RS12740;Dbxref=GenBank:WP_003903426.1;Name=WP_003903426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215889.1;locus_tag=AL55_RS12740;product=glycolipid sulfotransferase;protein_id=WP_003903426.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1545593 1546051 . - . ID=gene-AL55_RS12745;Name=AL55_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12745;old_locus_tag=AL55_01432 NZ_KK316828.1 Protein Homology CDS 1545593 1546051 . - 0 ID=cds-WP_003901145.1;Parent=gene-AL55_RS12745;Dbxref=GenBank:WP_003901145.1;Name=WP_003901145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215890.2;locus_tag=AL55_RS12745;product=hypothetical protein;protein_id=WP_003901145.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1546353 1547672 . + . ID=gene-AL55_RS12750;Name=AL55_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12750;old_locus_tag=AL55_01433 NZ_KK316828.1 Protein Homology CDS 1546353 1547672 . + 0 ID=cds-WP_003898850.1;Parent=gene-AL55_RS12750;Dbxref=GenBank:WP_003898850.1;Name=WP_003898850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215891.1;locus_tag=AL55_RS12750;product=YcaO-like family protein;protein_id=WP_003898850.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1547669 1549162 . + . ID=gene-AL55_RS12755;Name=AL55_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12755;old_locus_tag=AL55_01434 NZ_KK316828.1 Protein Homology CDS 1547669 1549162 . + 0 ID=cds-WP_003900327.1;Parent=gene-AL55_RS12755;Dbxref=GenBank:WP_003900327.1;Name=WP_003900327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215892.1;locus_tag=AL55_RS12755;product=TfuA-like protein;protein_id=WP_003900327.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1549100 1549738 . - . ID=gene-AL55_RS12760;Name=AL55_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12760;old_locus_tag=AL55_01435 NZ_KK316828.1 Protein Homology CDS 1549100 1549738 . - 0 ID=cds-WP_003898852.1;Parent=gene-AL55_RS12760;Dbxref=GenBank:WP_003898852.1;Name=WP_003898852.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215893.1;locus_tag=AL55_RS12760;product=class I SAM-dependent methyltransferase;protein_id=WP_003898852.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1549749 1551038 . - . ID=gene-AL55_RS12765;Name=AL55_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12765;old_locus_tag=AL55_01436 NZ_KK316828.1 Protein Homology CDS 1549749 1551038 . - 0 ID=cds-WP_003911527.1;Parent=gene-AL55_RS12765;Dbxref=GenBank:WP_003911527.1;Name=WP_003911527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911527.1;locus_tag=AL55_RS12765;product=HNH endonuclease;protein_id=WP_003911527.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1551175 1551756 . + . ID=gene-AL55_RS12770;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=AL55_RS12770;old_locus_tag=AL55_01437 NZ_KK316828.1 Protein Homology CDS 1551175 1551756 . + 0 ID=cds-WP_003407196.1;Parent=gene-AL55_RS12770;Dbxref=GenBank:WP_003407196.1;Name=WP_003407196.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215895.1;locus_tag=AL55_RS12770;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_003407196.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1551753 1552712 . + . ID=gene-AL55_RS12775;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AL55_RS12775;old_locus_tag=AL55_01438 NZ_KK316828.1 Protein Homology CDS 1551753 1552712 . + 0 ID=cds-WP_003407200.1;Parent=gene-AL55_RS12775;Dbxref=GenBank:WP_003407200.1;Name=WP_003407200.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215896.1;locus_tag=AL55_RS12775;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_003407200.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1552709 1554001 . + . ID=gene-AL55_RS12780;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=AL55_RS12780;old_locus_tag=AL55_01439 NZ_KK316828.1 Protein Homology CDS 1552709 1554001 . + 0 ID=cds-WP_031721878.1;Parent=gene-AL55_RS12780;Dbxref=GenBank:WP_031721878.1;Name=WP_031721878.1;gbkey=CDS;gene=pyrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215897.1;locus_tag=AL55_RS12780;product=dihydroorotase;protein_id=WP_031721878.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1553998 1554495 . + . ID=gene-AL55_RS12785;Name=AL55_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12785;old_locus_tag=AL55_01440 NZ_KK316828.1 Protein Homology CDS 1553998 1554495 . + 0 ID=cds-WP_003898853.1;Parent=gene-AL55_RS12785;Dbxref=GenBank:WP_003898853.1;Name=WP_003898853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215898.1;locus_tag=AL55_RS12785;product=PH-like domain-containing protein;protein_id=WP_003898853.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1554492 1555622 . + . ID=gene-AL55_RS12790;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=AL55_RS12790;old_locus_tag=AL55_01441 NZ_KK316828.1 Protein Homology CDS 1554492 1555622 . + 0 ID=cds-WP_003902052.1;Parent=gene-AL55_RS12790;Dbxref=GenBank:WP_003902052.1;Name=WP_003902052.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215899.1;locus_tag=AL55_RS12790;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_003902052.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1555622 1558969 . + . ID=gene-AL55_RS12795;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AL55_RS12795;old_locus_tag=AL55_01442 NZ_KK316828.1 Protein Homology CDS 1555622 1558969 . + 0 ID=cds-WP_003898855.1;Parent=gene-AL55_RS12795;Dbxref=GenBank:WP_003898855.1;Name=WP_003898855.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177804.1;locus_tag=AL55_RS12795;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_003898855.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1558966 1559790 . + . ID=gene-AL55_RS12800;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AL55_RS12800;old_locus_tag=AL55_01443 NZ_KK316828.1 Protein Homology CDS 1558966 1559790 . + 0 ID=cds-WP_003407220.1;Parent=gene-AL55_RS12800;Dbxref=GenBank:WP_003407220.1;Name=WP_003407220.1;Ontology_term=GO:0006221,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215901.1;locus_tag=AL55_RS12800;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_003407220.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1559985 1560293 . + . ID=gene-AL55_RS12805;Name=AL55_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12805;old_locus_tag=AL55_01444 NZ_KK316828.1 Protein Homology CDS 1559985 1560293 . + 0 ID=cds-WP_003407225.1;Parent=gene-AL55_RS12805;Dbxref=GenBank:WP_003407225.1;Name=WP_003407225.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177805.1;locus_tag=AL55_RS12805;product=PE family protein;protein_id=WP_003407225.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1560290 1561909 . + . ID=gene-AL55_RS12810;Name=AL55_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12810;old_locus_tag=AL55_01445 NZ_KK316828.1 Protein Homology CDS 1560290 1561909 . + 0 ID=cds-WP_003905549.1;Parent=gene-AL55_RS12810;Dbxref=GenBank:WP_003905549.1;Name=WP_003905549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177806.1;locus_tag=AL55_RS12810;product=PPE family protein;protein_id=WP_003905549.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1562470 1562787 . + . ID=gene-AL55_RS26935;Name=mihF;gbkey=Gene;gene=mihF;gene_biotype=protein_coding;locus_tag=AL55_RS26935 NZ_KK316828.1 Protein Homology CDS 1562470 1562787 . + 0 ID=cds-WP_003407240.1;Parent=gene-AL55_RS26935;Dbxref=GenBank:WP_003407240.1;Name=WP_003407240.1;gbkey=CDS;gene=mihF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010907783.1;locus_tag=AL55_RS26935;product=integration host factor%2C actinobacterial type;protein_id=WP_003407240.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1562922 1563548 . + . ID=gene-AL55_RS12815;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=AL55_RS12815;old_locus_tag=AL55_01447 NZ_KK316828.1 Protein Homology CDS 1562922 1563548 . + 0 ID=cds-WP_003900331.1;Parent=gene-AL55_RS12815;Dbxref=GenBank:WP_003900331.1;Name=WP_003900331.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215905.1;locus_tag=AL55_RS12815;product=guanylate kinase;protein_id=WP_003900331.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1563614 1563946 . + . ID=gene-AL55_RS12820;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AL55_RS12820;old_locus_tag=AL55_01448 NZ_KK316828.1 Protein Homology CDS 1563614 1563946 . + 0 ID=cds-WP_003407248.1;Parent=gene-AL55_RS12820;Dbxref=GenBank:WP_003407248.1;Name=WP_003407248.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215906.1;locus_tag=AL55_RS12820;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_003407248.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1563962 1565218 . + . ID=gene-AL55_RS12825;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AL55_RS12825;old_locus_tag=AL55_01449 NZ_KK316828.1 Protein Homology CDS 1563962 1565218 . + 0 ID=cds-WP_003898859.1;Parent=gene-AL55_RS12825;Dbxref=GenBank:WP_003898859.1;Name=WP_003898859.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215907.1;locus_tag=AL55_RS12825;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_003898859.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1565346 1566557 . + . ID=gene-AL55_RS12830;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AL55_RS12830;old_locus_tag=AL55_01450 NZ_KK316828.1 Protein Homology CDS 1565346 1566557 . + 0 ID=cds-WP_031695399.1;Parent=gene-AL55_RS12830;Dbxref=GenBank:WP_031695399.1;Name=WP_031695399.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012393969.1;locus_tag=AL55_RS12830;product=methionine adenosyltransferase;protein_id=WP_031695399.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1566630 1568108 . - . ID=gene-AL55_RS12835;Name=AL55_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12835;old_locus_tag=AL55_01451 NZ_KK316828.1 Protein Homology CDS 1566630 1568108 . - 0 ID=cds-WP_003407257.1;Parent=gene-AL55_RS12835;Dbxref=GenBank:WP_003407257.1;Name=WP_003407257.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215909.1;locus_tag=AL55_RS12835;product=flavin-containing monooxygenase;protein_id=WP_003407257.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1568105 1569490 . - . ID=gene-AL55_RS12840;Name=AL55_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12840;old_locus_tag=AL55_01452 NZ_KK316828.1 Protein Homology CDS 1568105 1569490 . - 0 ID=cds-WP_003407260.1;Parent=gene-AL55_RS12840;Dbxref=GenBank:WP_003407260.1;Name=WP_003407260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177807.1;locus_tag=AL55_RS12840;product=cytochrome P450;protein_id=WP_003407260.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1569568 1570602 . + . ID=gene-AL55_RS12845;Name=AL55_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12845;old_locus_tag=AL55_01453 NZ_KK316828.1 Protein Homology CDS 1569568 1570602 . + 0 ID=cds-WP_003407264.1;Parent=gene-AL55_RS12845;Dbxref=GenBank:WP_003407264.1;Name=WP_003407264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177808.1;locus_tag=AL55_RS12845;product=AraC family transcriptional regulator;protein_id=WP_003407264.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1570648 1572378 . - . ID=gene-AL55_RS12850;Name=AL55_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12850;old_locus_tag=AL55_01454 NZ_KK316828.1 Protein Homology CDS 1570648 1572378 . - 0 ID=cds-WP_009940170.1;Parent=gene-AL55_RS12850;Dbxref=GenBank:WP_009940170.1;Name=WP_009940170.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177809.1;locus_tag=AL55_RS12850;product=PE family protein;protein_id=WP_009940170.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1572633 1573034 . - . ID=gene-AL55_RS12855;Name=AL55_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12855;old_locus_tag=AL55_01455 NZ_KK316828.1 Protein Homology CDS 1572633 1573034 . - 0 ID=cds-WP_003898861.1;Parent=gene-AL55_RS12855;Dbxref=GenBank:WP_003898861.1;Name=WP_003898861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215913.1;locus_tag=AL55_RS12855;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003898861.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1573031 1573288 . - . ID=gene-AL55_RS12860;Name=AL55_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12860;old_locus_tag=AL55_01456 NZ_KK316828.1 Protein Homology CDS 1573031 1573288 . - 0 ID=cds-WP_003407272.1;Parent=gene-AL55_RS12860;Dbxref=GenBank:WP_003407272.1;Name=WP_003407272.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215914.1;locus_tag=AL55_RS12860;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003407272.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1573371 1574330 . - . ID=gene-AL55_RS12865;Name=nlhH;gbkey=Gene;gene=nlhH;gene_biotype=protein_coding;locus_tag=AL55_RS12865;old_locus_tag=AL55_01457 NZ_KK316828.1 Protein Homology CDS 1573371 1574330 . - 0 ID=cds-WP_003407276.1;Parent=gene-AL55_RS12865;Dbxref=GenBank:WP_003407276.1;Name=WP_003407276.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nlhH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215915.1;locus_tag=AL55_RS12865;product=alpha/beta hydrolase;protein_id=WP_003407276.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1574355 1575317 . - . ID=gene-AL55_RS12870;Name=lipI;gbkey=Gene;gene=lipI;gene_biotype=protein_coding;locus_tag=AL55_RS12870;old_locus_tag=AL55_01458 NZ_KK316828.1 Protein Homology CDS 1574355 1575317 . - 0 ID=cds-WP_003905554.1;Parent=gene-AL55_RS12870;Dbxref=GenBank:WP_003905554.1;Name=WP_003905554.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipI;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215916.1;locus_tag=AL55_RS12870;product=alpha/beta hydrolase;protein_id=WP_003905554.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1575268 1576053 . + . ID=gene-AL55_RS12875;Name=AL55_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12875;old_locus_tag=AL55_01459 NZ_KK316828.1 Protein Homology CDS 1575268 1576053 . + 0 ID=cds-WP_003898862.1;Parent=gene-AL55_RS12875;Dbxref=GenBank:WP_003898862.1;Name=WP_003898862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898862.1;locus_tag=AL55_RS12875;product=lysoplasmalogenase;protein_id=WP_003898862.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1576134 1578101 . + . ID=gene-AL55_RS12880;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AL55_RS12880;old_locus_tag=AL55_01460 NZ_KK316828.1 Protein Homology CDS 1576134 1578101 . + 0 ID=cds-WP_003407285.1;Parent=gene-AL55_RS12880;Dbxref=GenBank:WP_003407285.1;Name=WP_003407285.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013829229.1;locus_tag=AL55_RS12880;product=primosomal protein N';protein_id=WP_003407285.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1578119 1578943 . - . ID=gene-AL55_RS12885;Name=AL55_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12885;old_locus_tag=AL55_01461 NZ_KK316828.1 Protein Homology CDS 1578119 1578943 . - 0 ID=cds-WP_003407292.1;Parent=gene-AL55_RS12885;Dbxref=GenBank:WP_003407292.1;Name=WP_003407292.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215919.1;locus_tag=AL55_RS12885;product=class I SAM-dependent methyltransferase;protein_id=WP_003407292.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1579112 1579594 . + . ID=gene-AL55_RS12890;Name=AL55_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12890;old_locus_tag=AL55_01462 NZ_KK316828.1 Protein Homology CDS 1579112 1579594 . + 0 ID=cds-WP_003407295.1;Parent=gene-AL55_RS12890;Dbxref=GenBank:WP_003407295.1;Name=WP_003407295.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215920.1;locus_tag=AL55_RS12890;product=MarR family transcriptional regulator;protein_id=WP_003407295.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1579666 1580490 . - . ID=gene-AL55_RS12895;Name=AL55_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12895;old_locus_tag=AL55_01463 NZ_KK316828.1 Protein Homology CDS 1579666 1580490 . - 0 ID=cds-WP_003407297.1;Parent=gene-AL55_RS12895;Dbxref=GenBank:WP_003407297.1;Name=WP_003407297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215921.1;locus_tag=AL55_RS12895;product=virulence-associated methyltransferase;protein_id=WP_003407297.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1580687 1581625 . + . ID=gene-AL55_RS12900;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AL55_RS12900;old_locus_tag=AL55_01464 NZ_KK316828.1 Protein Homology CDS 1580687 1581625 . + 0 ID=cds-WP_003900336.1;Parent=gene-AL55_RS12900;Dbxref=GenBank:WP_003900336.1;Name=WP_003900336.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215922.1;locus_tag=AL55_RS12900;product=methionyl-tRNA formyltransferase;protein_id=WP_003900336.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1581622 1582995 . + . ID=gene-AL55_RS12905;Name=fmu;gbkey=Gene;gene=fmu;gene_biotype=protein_coding;locus_tag=AL55_RS12905;old_locus_tag=AL55_01465 NZ_KK316828.1 Protein Homology CDS 1581622 1582995 . + 0 ID=cds-WP_003898865.1;Parent=gene-AL55_RS12905;Dbxref=GenBank:WP_003898865.1;Name=WP_003898865.1;gbkey=CDS;gene=fmu;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215923.1;locus_tag=AL55_RS12905;product=RsmB/NOP family class I SAM-dependent RNA methyltransferase;protein_id=WP_003898865.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1583020 1583718 . + . ID=gene-AL55_RS12910;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AL55_RS12910;old_locus_tag=AL55_01466 NZ_KK316828.1 Protein Homology CDS 1583020 1583718 . + 0 ID=cds-WP_003901153.1;Parent=gene-AL55_RS12910;Dbxref=GenBank:WP_003901153.1;Name=WP_003901153.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215924.1;locus_tag=AL55_RS12910;product=ribulose-phosphate 3-epimerase;protein_id=WP_003901153.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1583715 1584734 . + . ID=gene-AL55_RS12915;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AL55_RS12915;old_locus_tag=AL55_01467 NZ_KK316828.1 Protein Homology CDS 1583715 1584734 . + 0 ID=cds-WP_003898867.1;Parent=gene-AL55_RS12915;Dbxref=GenBank:WP_003898867.1;Name=WP_003898867.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215925.1;locus_tag=AL55_RS12915;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_003898867.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1584731 1586287 . - . ID=gene-AL55_RS12920;Name=AL55_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12920;old_locus_tag=AL55_01468 NZ_KK316828.1 Protein Homology CDS 1584731 1586287 . - 0 ID=cds-WP_003407310.1;Parent=gene-AL55_RS12920;Dbxref=GenBank:WP_003407310.1;Name=WP_003407310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215926.1;locus_tag=AL55_RS12920;product=aminoglycoside/tetracycline transporter;protein_id=WP_003407310.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1586293 1587003 . - . ID=gene-AL55_RS12925;Name=lprG;gbkey=Gene;gene=lprG;gene_biotype=protein_coding;locus_tag=AL55_RS12925;old_locus_tag=AL55_01469 NZ_KK316828.1 Protein Homology CDS 1586293 1587003 . - 0 ID=cds-WP_003407315.1;Parent=gene-AL55_RS12925;Dbxref=GenBank:WP_003407315.1;Name=WP_003407315.1;gbkey=CDS;gene=lprG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215927.1;locus_tag=AL55_RS12925;product=lipoarabinomannan carrier protein LprG;protein_id=WP_003407315.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1587088 1587693 . + . ID=gene-AL55_RS12930;Name=ribC;gbkey=Gene;gene=ribC;gene_biotype=protein_coding;locus_tag=AL55_RS12930;old_locus_tag=AL55_01470 NZ_KK316828.1 Protein Homology CDS 1587088 1587693 . + 0 ID=cds-WP_003407318.1;Parent=gene-AL55_RS12930;Dbxref=GenBank:WP_003407318.1;Name=WP_003407318.1;gbkey=CDS;gene=ribC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215928.1;locus_tag=AL55_RS12930;product=riboflavin synthase;protein_id=WP_003407318.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1587720 1588813 . + . ID=gene-AL55_RS27260;Name=AL55_RS27260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27260;pseudo=true NZ_KK316828.1 Protein Homology CDS 1587720 1588813 . + 0 ID=cds-AL55_RS27260;Parent=gene-AL55_RS27260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292928.1;locus_tag=AL55_RS27260;product=alanine racemase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1588918 1590195 . + . ID=gene-AL55_RS12945;Name=AL55_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12945;old_locus_tag=AL55_01473 NZ_KK316828.1 Protein Homology CDS 1588918 1590195 . + 0 ID=cds-WP_003407334.1;Parent=gene-AL55_RS12945;Dbxref=GenBank:WP_003407334.1;Name=WP_003407334.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215931.1;locus_tag=AL55_RS12945;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_003407334.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1590192 1590674 . + . ID=gene-AL55_RS12950;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AL55_RS12950;old_locus_tag=AL55_01474 NZ_KK316828.1 Protein Homology CDS 1590192 1590674 . + 0 ID=cds-WP_003898872.1;Parent=gene-AL55_RS12950;Dbxref=GenBank:WP_003898872.1;Name=WP_003898872.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215932.2;locus_tag=AL55_RS12950;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_003898872.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1590671 1591135 . + . ID=gene-AL55_RS12955;Name=AL55_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12955;old_locus_tag=AL55_01475 NZ_KK316828.1 Protein Homology CDS 1590671 1591135 . + 0 ID=cds-WP_003407340.1;Parent=gene-AL55_RS12955;Dbxref=GenBank:WP_003407340.1;Name=WP_003407340.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215933.1;locus_tag=AL55_RS12955;product=PH domain-containing protein;protein_id=WP_003407340.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1591160 1591846 . + . ID=gene-AL55_RS12960;Name=AL55_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12960;old_locus_tag=AL55_01476 NZ_KK316828.1 Protein Homology CDS 1591160 1591846 . + 0 ID=cds-WP_003407343.1;Parent=gene-AL55_RS12960;Dbxref=GenBank:WP_003407343.1;Name=WP_003407343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215934.1;locus_tag=AL55_RS12960;product=hypothetical protein;protein_id=WP_003407343.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1592026 1592499 . + . ID=gene-AL55_RS12965;Name=AL55_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12965;old_locus_tag=AL55_01477 NZ_KK316828.1 Protein Homology CDS 1592026 1592499 . + 0 ID=cds-WP_003407345.1;Parent=gene-AL55_RS12965;Dbxref=GenBank:WP_003407345.1;Name=WP_003407345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215935.1;locus_tag=AL55_RS12965;product=lectin;protein_id=WP_003407345.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1592563 1594503 . + . ID=gene-AL55_RS12970;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AL55_RS12970;old_locus_tag=AL55_01478 NZ_KK316828.1 Protein Homology CDS 1592563 1594503 . + 0 ID=cds-WP_003910831.1;Parent=gene-AL55_RS12970;Dbxref=GenBank:WP_003910831.1;Name=WP_003910831.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215936.1;locus_tag=AL55_RS12970;product=excinuclease ABC subunit UvrC;protein_id=WP_003910831.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1594500 1595405 . + . ID=gene-AL55_RS12975;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=AL55_RS12975;old_locus_tag=AL55_01479 NZ_KK316828.1 Protein Homology CDS 1594500 1595405 . + 0 ID=cds-WP_003898873.1;Parent=gene-AL55_RS12975;Dbxref=GenBank:WP_003898873.1;Name=WP_003898873.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215937.1;locus_tag=AL55_RS12975;product=RNase adapter RapZ;protein_id=WP_003898873.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1595402 1596430 . + . ID=gene-AL55_RS12980;Name=cuvA;gbkey=Gene;gene=cuvA;gene_biotype=protein_coding;locus_tag=AL55_RS12980;old_locus_tag=AL55_01480 NZ_KK316828.1 Protein Homology CDS 1595402 1596430 . + 0 ID=cds-WP_003407352.1;Parent=gene-AL55_RS12980;Dbxref=GenBank:WP_003407352.1;Name=WP_003407352.1;gbkey=CDS;gene=cuvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215938.1;locus_tag=AL55_RS12980;product=carbon utilization/virulence protein CuvA;protein_id=WP_003407352.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1596427 1597404 . + . ID=gene-AL55_RS12985;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=AL55_RS12985;old_locus_tag=AL55_01481 NZ_KK316828.1 Protein Homology CDS 1596427 1597404 . + 0 ID=cds-WP_003901156.1;Parent=gene-AL55_RS12985;Dbxref=GenBank:WP_003901156.1;Name=WP_003901156.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215939.1;locus_tag=AL55_RS12985;product=DNA-binding protein WhiA;protein_id=WP_003901156.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1597414 1598175 . - . ID=gene-AL55_RS12990;Name=AL55_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12990;old_locus_tag=AL55_01482 NZ_KK316828.1 Protein Homology CDS 1597414 1598175 . - 0 ID=cds-WP_003407359.1;Parent=gene-AL55_RS12990;Dbxref=GenBank:WP_003407359.1;Name=WP_003407359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215940.1;locus_tag=AL55_RS12990;product=membrane protein;protein_id=WP_003407359.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1598179 1599558 . + . ID=gene-AL55_RS12995;Name=AL55_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS12995;old_locus_tag=AL55_01483 NZ_KK316828.1 Protein Homology CDS 1598179 1599558 . + 0 ID=cds-WP_003898875.1;Parent=gene-AL55_RS12995;Dbxref=GenBank:WP_003898875.1;Name=WP_003898875.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215941.1;locus_tag=AL55_RS12995;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003898875.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1599580 1600842 . - . ID=gene-AL55_RS13000;Name=lipO;gbkey=Gene;gene=lipO;gene_biotype=protein_coding;locus_tag=AL55_RS13000;old_locus_tag=AL55_01484 NZ_KK316828.1 Protein Homology CDS 1599580 1600842 . - 0 ID=cds-WP_003407371.1;Parent=gene-AL55_RS13000;Dbxref=GenBank:WP_003407371.1;Name=WP_003407371.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipO;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215942.1;locus_tag=AL55_RS13000;product=alpha/beta hydrolase;protein_id=WP_003407371.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1600842 1602449 . - . ID=gene-AL55_RS13005;Name=fadD12;gbkey=Gene;gene=fadD12;gene_biotype=protein_coding;locus_tag=AL55_RS13005;old_locus_tag=AL55_01485 NZ_KK316828.1 Protein Homology CDS 1600842 1602449 . - 0 ID=cds-WP_003898876.1;Parent=gene-AL55_RS13005;Dbxref=GenBank:WP_003898876.1;Name=WP_003898876.1;gbkey=CDS;gene=fadD12;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215943.1;locus_tag=AL55_RS13005;product=acyl-CoA ligase FadD12;protein_id=WP_003898876.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1602453 1603280 . - . ID=gene-AL55_RS13010;Name=AL55_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13010;old_locus_tag=AL55_01486 NZ_KK316828.1 Protein Homology CDS 1602453 1603280 . - 0 ID=cds-WP_003407374.1;Parent=gene-AL55_RS13010;Dbxref=GenBank:WP_003407374.1;Name=WP_003407374.1;Ontology_term=GO:0006644,GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid metabolic process|0006644||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215944.1;locus_tag=AL55_RS13010;product=lysophospholipid acyltransferase family protein;protein_id=WP_003407374.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1603399 1604667 . + . ID=gene-AL55_RS13015;Name=AL55_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13015;old_locus_tag=AL55_01487 NZ_KK316828.1 Protein Homology CDS 1603399 1604667 . + 0 ID=cds-WP_003407376.1;Parent=gene-AL55_RS13015;Dbxref=GenBank:WP_003407376.1;Name=WP_003407376.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215945.1;locus_tag=AL55_RS13015;product=PucR family transcriptional regulator;protein_id=WP_003407376.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1604907 1606493 . + . ID=gene-AL55_RS13020;Name=AL55_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13020;old_locus_tag=AL55_01488 NZ_KK316828.1 Protein Homology CDS 1604907 1606493 . + 0 ID=cds-WP_003407378.1;Parent=gene-AL55_RS13020;Dbxref=GenBank:WP_003407378.1;Name=WP_003407378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177810.1;locus_tag=AL55_RS13020;product=esterase PE16;protein_id=WP_003407378.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1606604 1608373 . + . ID=gene-AL55_RS13025;Name=AL55_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13025;old_locus_tag=AL55_01489 NZ_KK316828.1 Protein Homology CDS 1606604 1608373 . + 0 ID=cds-WP_003901159.1;Parent=gene-AL55_RS13025;Dbxref=GenBank:WP_003901159.1;Name=WP_003901159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215947.1;locus_tag=AL55_RS13025;product=DUF3556 domain-containing protein;protein_id=WP_003901159.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1608370 1609791 . + . ID=gene-AL55_RS13030;Name=AL55_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13030;old_locus_tag=AL55_01490 NZ_KK316828.1 Protein Homology CDS 1608370 1609791 . + 0 ID=cds-WP_003407382.1;Parent=gene-AL55_RS13030;Dbxref=GenBank:WP_003407382.1;Name=WP_003407382.1;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215948.1;locus_tag=AL55_RS13030;product=phytoene desaturase family protein;protein_id=WP_003407382.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1609955 1610770 . + . ID=gene-AL55_RS13035;Name=ldtMt3;gbkey=Gene;gene=ldtMt3;gene_biotype=protein_coding;locus_tag=AL55_RS13035;old_locus_tag=AL55_01491 NZ_KK316828.1 Protein Homology CDS 1609955 1610770 . + 0 ID=cds-WP_003407384.1;Parent=gene-AL55_RS13035;Dbxref=GenBank:WP_003407384.1;Name=WP_003407384.1;gbkey=CDS;gene=ldtMt3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215949.1;locus_tag=AL55_RS13035;product=L%2CD-transpeptidase LdtMt3;protein_id=WP_003407384.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1610777 1610914 . + . ID=gene-AL55_RS13040;Name=AL55_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13040;old_locus_tag=AL55_01492 NZ_KK316828.1 Protein Homology CDS 1610777 1610914 . + 0 ID=cds-WP_003908693.1;Parent=gene-AL55_RS13040;Dbxref=GenBank:WP_003908693.1;Name=WP_003908693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215950.1;locus_tag=AL55_RS13040;product=hypothetical protein;protein_id=WP_003908693.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1610863 1611492 . - . ID=gene-AL55_RS13045;Name=AL55_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13045;old_locus_tag=AL55_01493 NZ_KK316828.1 Protein Homology CDS 1610863 1611492 . - 0 ID=cds-WP_003898878.1;Parent=gene-AL55_RS13045;Dbxref=GenBank:WP_003898878.1;Name=WP_003898878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215951.1;locus_tag=AL55_RS13045;product=hypothetical protein;protein_id=WP_003898878.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1611849 1612868 . + . ID=gene-AL55_RS13050;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=AL55_RS13050;old_locus_tag=AL55_01494 NZ_KK316828.1 Protein Homology CDS 1611849 1612868 . + 0 ID=cds-WP_003407390.1;Parent=gene-AL55_RS13050;Dbxref=GenBank:WP_003407390.1;Name=WP_003407390.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215952.1;locus_tag=AL55_RS13050;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_003407390.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1612871 1614109 . + . ID=gene-AL55_RS13055;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=AL55_RS13055;old_locus_tag=AL55_01495 NZ_KK316828.1 Protein Homology CDS 1612871 1614109 . + 0 ID=cds-WP_003900339.1;Parent=gene-AL55_RS13055;Dbxref=GenBank:WP_003900339.1;Name=WP_003900339.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;gene=pgk;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215953.1;locus_tag=AL55_RS13055;product=phosphoglycerate kinase;protein_id=WP_003900339.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1614106 1614891 . + . ID=gene-AL55_RS13060;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AL55_RS13060;old_locus_tag=AL55_01496 NZ_KK316828.1 Protein Homology CDS 1614106 1614891 . + 0 ID=cds-WP_003407398.1;Parent=gene-AL55_RS13060;Dbxref=GenBank:WP_003407398.1;Name=WP_003407398.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215954.1;locus_tag=AL55_RS13060;product=triose-phosphate isomerase;protein_id=WP_003407398.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1614907 1615134 . - . ID=gene-AL55_RS0104695;Name=AL55_RS0104695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104695 NZ_KK316828.1 Protein Homology CDS 1614907 1615134 . - 0 ID=cds-WP_003407402.1;Parent=gene-AL55_RS0104695;Dbxref=GenBank:WP_003407402.1;Name=WP_003407402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003407402.1;locus_tag=AL55_RS0104695;product=hypothetical protein;protein_id=WP_003407402.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1615110 1615241 . - . ID=gene-AL55_RS28025;Name=AL55_RS28025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28025 NZ_KK316828.1 Protein Homology CDS 1615110 1615241 . - 0 ID=cds-WP_349875721.1;Parent=gene-AL55_RS28025;Dbxref=GenBank:WP_349875721.1;Name=WP_349875721.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044451.3;locus_tag=AL55_RS28025;product=hypothetical protein;protein_id=WP_349875721.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1615325 1615495 . - . ID=gene-AL55_RS28030;Name=AL55_RS28030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28030;partial=true;pseudo=true;start_range=.,1615325 NZ_KK316828.1 Protein Homology CDS 1615325 1615495 . - 0 ID=cds-AL55_RS28030;Parent=gene-AL55_RS28030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF012655.6;locus_tag=AL55_RS28030;partial=true;product=TetR family transcriptional regulator;pseudo=true;start_range=.,1615325;transl_table=11 NZ_KK316828.1 RefSeq gene 1615503 1615928 . - . ID=gene-AL55_RS13065;Name=AL55_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13065;old_locus_tag=AL55_01497 NZ_KK316828.1 Protein Homology CDS 1615503 1615928 . - 0 ID=cds-WP_003902070.1;Parent=gene-AL55_RS13065;Dbxref=GenBank:WP_003902070.1;Name=WP_003902070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215955.1;locus_tag=AL55_RS13065;product=nuclear transport factor 2 family protein;protein_id=WP_003902070.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1616379 1616612 . + . ID=gene-AL55_RS13070;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AL55_RS13070;old_locus_tag=AL55_01498 NZ_KK316828.1 Protein Homology CDS 1616379 1616612 . + 0 ID=cds-WP_003407407.1;Parent=gene-AL55_RS13070;Dbxref=GenBank:WP_003407407.1;Name=WP_003407407.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215956.2;locus_tag=AL55_RS13070;product=preprotein translocase subunit SecG;protein_id=WP_003407407.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1616751 1618208 . - . ID=gene-AL55_RS13075;Name=AL55_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13075;old_locus_tag=AL55_01499 NZ_KK316828.1 Protein Homology CDS 1616751 1618208 . - 0 ID=cds-WP_016810222.1;Parent=gene-AL55_RS13075;Dbxref=GenBank:WP_016810222.1;Name=WP_016810222.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177811.1;locus_tag=AL55_RS13075;product=PE family protein;protein_id=WP_016810222.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1618315 1620615 . + . ID=gene-AL55_RS13080;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=AL55_RS13080;old_locus_tag=AL55_01500 NZ_KK316828.1 Protein Homology CDS 1618315 1620615 . + 0 ID=cds-WP_003902073.1;Parent=gene-AL55_RS13080;Dbxref=GenBank:WP_003902073.1;Name=WP_003902073.1;gbkey=CDS;gene=bisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215958.1;locus_tag=AL55_RS13080;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_003902073.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1620731 1621195 . - . ID=gene-AL55_RS13085;Name=AL55_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13085;old_locus_tag=AL55_01501 NZ_KK316828.1 Protein Homology CDS 1620731 1621195 . - 0 ID=cds-WP_014584749.1;Parent=gene-AL55_RS13085;Dbxref=GenBank:WP_014584749.1;Name=WP_014584749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584749.1;locus_tag=AL55_RS13085;product=SRPBCC family protein;protein_id=WP_014584749.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1621292 1621531 . + . ID=gene-AL55_RS28035;Name=AL55_RS28035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28035 NZ_KK316828.1 Protein Homology CDS 1621292 1621531 . + 0 ID=cds-WP_003407426.1;Parent=gene-AL55_RS28035;Dbxref=GenBank:WP_003407426.1;Name=WP_003407426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015456255.1;locus_tag=AL55_RS28035;product=hypothetical protein;protein_id=WP_003407426.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1621811 1622220 . - . ID=gene-AL55_RS13090;Name=AL55_RS13090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS13090;old_locus_tag=AL55_01502;pseudo=true NZ_KK316828.1 Protein Homology CDS 1621811 1622220 . - 0 ID=cds-AL55_RS13090;Parent=gene-AL55_RS13090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011739930.1;locus_tag=AL55_RS13090;product=ATPase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1622237 1622980 . - . ID=gene-AL55_RS13095;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=AL55_RS13095;old_locus_tag=AL55_01503 NZ_KK316828.1 Protein Homology CDS 1622237 1622980 . - 0 ID=cds-WP_003407433.1;Parent=gene-AL55_RS13095;Dbxref=GenBank:WP_003407433.1;Name=WP_003407433.1;Ontology_term=GO:0005975,GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=carbohydrate metabolic process|0005975||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215961.1;locus_tag=AL55_RS13095;product=6-phosphogluconolactonase;protein_id=WP_003407433.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1622977 1623891 . - . ID=gene-AL55_RS13100;Name=opcA;gbkey=Gene;gene=opcA;gene_biotype=protein_coding;locus_tag=AL55_RS13100;old_locus_tag=AL55_01504 NZ_KK316828.1 Protein Homology CDS 1622977 1623891 . - 0 ID=cds-WP_003902074.1;Parent=gene-AL55_RS13100;Dbxref=GenBank:WP_003902074.1;Name=WP_003902074.1;Ontology_term=GO:0006098,GO:0065003;gbkey=CDS;gene=opcA;go_process=pentose-phosphate shunt|0006098||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215962.1;locus_tag=AL55_RS13100;product=glucose-6-phosphate dehydrogenase assembly protein OpcA;protein_id=WP_003902074.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1623944 1625488 . - . ID=gene-AL55_RS13105;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=AL55_RS13105;old_locus_tag=AL55_01505 NZ_KK316828.1 Protein Homology CDS 1623944 1625488 . - 0 ID=cds-WP_003407443.1;Parent=gene-AL55_RS13105;Dbxref=GenBank:WP_003407443.1;Name=WP_003407443.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215963.1;locus_tag=AL55_RS13105;product=glucose-6-phosphate dehydrogenase;protein_id=WP_003407443.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1625485 1626606 . - . ID=gene-AL55_RS13110;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AL55_RS13110;old_locus_tag=AL55_01506 NZ_KK316828.1 Protein Homology CDS 1625485 1626606 . - 0 ID=cds-WP_003407447.1;Parent=gene-AL55_RS13110;Dbxref=GenBank:WP_003407447.1;Name=WP_003407447.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215964.1;locus_tag=AL55_RS13110;product=transaldolase;protein_id=WP_003407447.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1626623 1628725 . - . ID=gene-AL55_RS13115;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AL55_RS13115;old_locus_tag=AL55_01507 NZ_KK316828.1 Protein Homology CDS 1626623 1628725 . - 0 ID=cds-WP_003407451.1;Parent=gene-AL55_RS13115;Dbxref=GenBank:WP_003407451.1;Name=WP_003407451.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215965.1;locus_tag=AL55_RS13115;product=transketolase;protein_id=WP_003407451.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1629164 1632577 . - . ID=gene-AL55_RS13120;Name=AL55_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13120;old_locus_tag=AL55_01508 NZ_KK316828.1 Protein Homology CDS 1629164 1632577 . - 0 ID=cds-WP_434738398.1;Parent=gene-AL55_RS13120;Dbxref=GenBank:WP_434738398.1;Name=WP_434738398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830018.1;locus_tag=AL55_RS13120;product=PE family protein;protein_id=WP_434738398.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1632679 1632991 . - . ID=gene-AL55_RS27670;Name=AL55_RS27670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27670;partial=true;start_range=.,1632679 NZ_KK316828.1 Protein Homology CDS 1632679 1632991 . - 0 ID=cds-WP_151922647.1;Parent=gene-AL55_RS27670;Dbxref=GenBank:WP_151922647.1;Name=WP_151922647.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177799.1;locus_tag=AL55_RS27670;partial=true;product=PE family protein;protein_id=WP_151922647.1;start_range=.,1632679;transl_table=11 NZ_KK316828.1 RefSeq gene 1633393 1634319 . + . ID=gene-AL55_RS13125;Name=ctaB;gbkey=Gene;gene=ctaB;gene_biotype=protein_coding;locus_tag=AL55_RS13125;old_locus_tag=AL55_01509 NZ_KK316828.1 Protein Homology CDS 1633393 1634319 . + 0 ID=cds-WP_003898882.1;Parent=gene-AL55_RS13125;Dbxref=GenBank:WP_003898882.1;Name=WP_003898882.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=ctaB;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215967.1;locus_tag=AL55_RS13125;product=heme o synthase;protein_id=WP_003898882.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1634368 1636671 . - . ID=gene-AL55_RS13130;Name=AL55_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13130;old_locus_tag=AL55_01510 NZ_KK316828.1 Protein Homology CDS 1634368 1636671 . - 0 ID=cds-WP_031648889.1;Parent=gene-AL55_RS13130;Dbxref=GenBank:WP_031648889.1;Name=WP_031648889.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177813.1;locus_tag=AL55_RS13130;product=PE family protein;protein_id=WP_031648889.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1636823 1638088 . + . ID=gene-AL55_RS13135;Name=AL55_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13135;old_locus_tag=AL55_01511 NZ_KK316828.1 Protein Homology CDS 1636823 1638088 . + 0 ID=cds-WP_003904629.1;Parent=gene-AL55_RS13135;Dbxref=GenBank:WP_003904629.1;Name=WP_003904629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215969.2;locus_tag=AL55_RS13135;product=Rv1453 family transcriptional regulator;protein_id=WP_003904629.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1638116 1639102 . - . ID=gene-AL55_RS13140;Name=qor;gbkey=Gene;gene=qor;gene_biotype=protein_coding;locus_tag=AL55_RS13140;old_locus_tag=AL55_01512 NZ_KK316828.1 Protein Homology CDS 1638116 1639102 . - 0 ID=cds-WP_003407462.1;Parent=gene-AL55_RS13140;Dbxref=GenBank:WP_003407462.1;Name=WP_003407462.1;Ontology_term=GO:0003960,GO:0070402;gbkey=CDS;gene=qor;go_function=NADPH:quinone reductase activity|0003960||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215970.1;locus_tag=AL55_RS13140;product=quinone oxidoreductase family protein;protein_id=WP_003407462.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1639122 1639985 . + . ID=gene-AL55_RS13145;Name=AL55_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13145;old_locus_tag=AL55_01513 NZ_KK316828.1 Protein Homology CDS 1639122 1639985 . + 0 ID=cds-WP_003900341.1;Parent=gene-AL55_RS13145;Dbxref=GenBank:WP_003900341.1;Name=WP_003900341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215971.1;locus_tag=AL55_RS13145;product=ATP-grasp domain-containing protein;protein_id=WP_003900341.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1639935 1640867 . - . ID=gene-AL55_RS13150;Name=AL55_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13150;old_locus_tag=AL55_01514 NZ_KK316828.1 Protein Homology CDS 1639935 1640867 . - 0 ID=cds-WP_003407466.1;Parent=gene-AL55_RS13150;Dbxref=GenBank:WP_003407466.1;Name=WP_003407466.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215972.1;locus_tag=AL55_RS13150;product=COX15/CtaA family protein;protein_id=WP_003407466.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1640979 1641764 . - . ID=gene-AL55_RS13155;Name=AL55_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13155;old_locus_tag=AL55_01515 NZ_KK316828.1 Protein Homology CDS 1640979 1641764 . - 0 ID=cds-WP_003407475.1;Parent=gene-AL55_RS13155;Dbxref=GenBank:WP_003407475.1;Name=WP_003407475.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215973.1;locus_tag=AL55_RS13155;product=ABC transporter permease;protein_id=WP_003407475.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1641761 1642702 . - . ID=gene-AL55_RS13160;Name=AL55_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13160;old_locus_tag=AL55_01516 NZ_KK316828.1 Protein Homology CDS 1641761 1642702 . - 0 ID=cds-WP_003901170.1;Parent=gene-AL55_RS13160;Dbxref=GenBank:WP_003901170.1;Name=WP_003901170.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215974.1;locus_tag=AL55_RS13160;product=ABC transporter ATP-binding protein;protein_id=WP_003901170.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1642858 1644633 . - . ID=gene-AL55_RS13165;Name=mptB;gbkey=Gene;gene=mptB;gene_biotype=protein_coding;locus_tag=AL55_RS13165;old_locus_tag=AL55_01517 NZ_KK316828.1 Protein Homology CDS 1642858 1644633 . - 0 ID=cds-WP_003407479.1;Parent=gene-AL55_RS13165;Dbxref=GenBank:WP_003407479.1;Name=WP_003407479.1;gbkey=CDS;gene=mptB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215975.1;locus_tag=AL55_RS13165;product=polyprenol phosphomannose-dependent alpha 1%2C6 mannosyltransferase MptB;protein_id=WP_003407479.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1644681 1645487 . + . ID=gene-AL55_RS13170;Name=sufR;gbkey=Gene;gene=sufR;gene_biotype=protein_coding;locus_tag=AL55_RS13170;old_locus_tag=AL55_01518 NZ_KK316828.1 Protein Homology CDS 1644681 1645487 . + 0 ID=cds-WP_003902080.1;Parent=gene-AL55_RS13170;Dbxref=GenBank:WP_003902080.1;Name=WP_003902080.1;gbkey=CDS;gene=sufR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215976.2;locus_tag=AL55_RS13170;product=suf operon transcriptional regulator SufR;protein_id=WP_003902080.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1645484 1648024 . + . ID=gene-AL55_RS13175;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=AL55_RS13175;old_locus_tag=AL55_01519 NZ_KK316828.1 Protein Homology CDS 1645484 1648024 . + 0 ID=cds-WP_003902081.1;Parent=gene-AL55_RS13175;Dbxref=GenBank:WP_003902081.1;Name=WP_003902081.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215977.1;locus_tag=AL55_RS13175;product=intein-containing Fe-S cluster assembly protein SufB;protein_id=WP_003902081.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1648021 1649214 . + . ID=gene-AL55_RS13180;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=AL55_RS13180;old_locus_tag=AL55_01520 NZ_KK316828.1 Protein Homology CDS 1648021 1649214 . + 0 ID=cds-WP_003407487.1;Parent=gene-AL55_RS13180;Dbxref=GenBank:WP_003407487.1;Name=WP_003407487.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215978.1;locus_tag=AL55_RS13180;product=Fe-S cluster assembly protein SufD;protein_id=WP_003407487.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1649211 1650011 . + . ID=gene-AL55_RS13185;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AL55_RS13185;old_locus_tag=AL55_01521 NZ_KK316828.1 Protein Homology CDS 1649211 1650011 . + 0 ID=cds-WP_003902082.1;Parent=gene-AL55_RS13185;Dbxref=GenBank:WP_003902082.1;Name=WP_003902082.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215979.1;locus_tag=AL55_RS13185;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_003902082.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1650013 1651266 . + . ID=gene-AL55_RS13190;Name=csd;gbkey=Gene;gene=csd;gene_biotype=protein_coding;locus_tag=AL55_RS13190;old_locus_tag=AL55_01522 NZ_KK316828.1 Protein Homology CDS 1650013 1651266 . + 0 ID=cds-WP_003407490.1;Parent=gene-AL55_RS13190;Dbxref=GenBank:WP_003407490.1;Name=WP_003407490.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=csd;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215980.1;locus_tag=AL55_RS13190;product=cysteine desulfurase;protein_id=WP_003407490.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1651263 1651751 . + . ID=gene-AL55_RS13195;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=AL55_RS13195;old_locus_tag=AL55_01523 NZ_KK316828.1 Protein Homology CDS 1651263 1651751 . + 0 ID=cds-WP_003407491.1;Parent=gene-AL55_RS13195;Dbxref=GenBank:WP_003407491.1;Name=WP_003407491.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215981.1;locus_tag=AL55_RS13195;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_003407491.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1651726 1652073 . + . ID=gene-AL55_RS13200;Name=AL55_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13200;old_locus_tag=AL55_01524 NZ_KK316828.1 Protein Homology CDS 1651726 1652073 . + 0 ID=cds-WP_003407492.1;Parent=gene-AL55_RS13200;Dbxref=GenBank:WP_003407492.1;Name=WP_003407492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215982.1;locus_tag=AL55_RS13200;product=metal-sulfur cluster assembly factor;protein_id=WP_003407492.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1652168 1653997 . - . ID=gene-AL55_RS13205;Name=AL55_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13205;old_locus_tag=AL55_01525 NZ_KK316828.1 Protein Homology CDS 1652168 1653997 . - 0 ID=cds-WP_003900343.1;Parent=gene-AL55_RS13205;Dbxref=GenBank:WP_003900343.1;Name=WP_003900343.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215983.1;locus_tag=AL55_RS13205;product=acyl-CoA dehydrogenase;protein_id=WP_003900343.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1654104 1655216 . - . ID=gene-AL55_RS13210;Name=AL55_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13210;old_locus_tag=AL55_01526 NZ_KK316828.1 Protein Homology CDS 1654104 1655216 . - 0 ID=cds-WP_003407494.1;Parent=gene-AL55_RS13210;Dbxref=GenBank:WP_003407494.1;Name=WP_003407494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177814.1;locus_tag=AL55_RS13210;product=PE-PGRS family ubiquitin-binding protein;protein_id=WP_003407494.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1655553 1656814 . - . ID=gene-AL55_RS13215;Name=AL55_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13215;old_locus_tag=AL55_01527 NZ_KK316828.1 Protein Homology CDS 1656526 1656814 . - 0 ID=cds-WP_087902221.1-4;Parent=gene-AL55_RS13215;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS13215;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 1655553 1656526 . - 2 ID=cds-WP_087902221.1-4;Parent=gene-AL55_RS13215;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS13215;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1656813 1658789 . + . ID=gene-AL55_RS13225;Name=ctpD;gbkey=Gene;gene=ctpD;gene_biotype=protein_coding;locus_tag=AL55_RS13225;old_locus_tag=AL55_01529 NZ_KK316828.1 Protein Homology CDS 1656813 1658789 . + 0 ID=cds-WP_003905583.1;Parent=gene-AL55_RS13225;Dbxref=GenBank:WP_003905583.1;Name=WP_003905583.1;gbkey=CDS;gene=ctpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215985.1;locus_tag=AL55_RS13225;product=cobalt-translocating P-type ATPase CtpD;protein_id=WP_003905583.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1658833 1659207 . + . ID=gene-AL55_RS13230;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AL55_RS13230;old_locus_tag=AL55_01530 NZ_KK316828.1 Protein Homology CDS 1658833 1659207 . + 0 ID=cds-WP_003900345.1;Parent=gene-AL55_RS13230;Dbxref=GenBank:WP_003900345.1;Name=WP_003900345.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215986.1;locus_tag=AL55_RS13230;product=thioredoxin family protein;protein_id=WP_003900345.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1659223 1659594 . + . ID=gene-AL55_RS13235;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AL55_RS13235;old_locus_tag=AL55_01531 NZ_KK316828.1 Protein Homology CDS 1659223 1659594 . + 0 ID=cds-WP_003407501.1;Parent=gene-AL55_RS13235;Dbxref=GenBank:WP_003407501.1;Name=WP_003407501.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177815.1;locus_tag=AL55_RS13235;product=thioredoxin;protein_id=WP_003407501.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1659616 1660473 . + . ID=gene-AL55_RS13240;Name=AL55_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13240;old_locus_tag=AL55_01532 NZ_KK316828.1 Protein Homology CDS 1659616 1660473 . + 0 ID=cds-WP_003898888.1;Parent=gene-AL55_RS13240;Dbxref=GenBank:WP_003898888.1;Name=WP_003898888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215988.1;locus_tag=AL55_RS13240;product=enoyl-CoA hydratase;protein_id=WP_003898888.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1660509 1662137 . + . ID=gene-AL55_RS13245;Name=AL55_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13245;old_locus_tag=AL55_01533 NZ_KK316828.1 Protein Homology CDS 1660509 1662137 . + 0 ID=cds-WP_003407507.1;Parent=gene-AL55_RS13245;Dbxref=GenBank:WP_003407507.1;Name=WP_003407507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215989.1;locus_tag=AL55_RS13245;product=macrolide ABC transporter ATP-binding protein;protein_id=WP_003407507.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1662234 1662425 . + . ID=gene-AL55_RS13250;Name=AL55_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13250;old_locus_tag=AL55_01534 NZ_KK316828.1 Protein Homology CDS 1662234 1662425 . + 0 ID=cds-WP_003407511.1;Parent=gene-AL55_RS13250;Dbxref=GenBank:WP_003407511.1;Name=WP_003407511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177644.1;locus_tag=AL55_RS13250;product=helix-turn-helix domain-containing protein;protein_id=WP_003407511.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1662494 1663057 . - . ID=gene-AL55_RS13255;Name=AL55_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13255;old_locus_tag=AL55_01535 NZ_KK316828.1 Protein Homology CDS 1662494 1663057 . - 0 ID=cds-WP_003407514.1;Parent=gene-AL55_RS13255;Dbxref=GenBank:WP_003407514.1;Name=WP_003407514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215990.1;locus_tag=AL55_RS13255;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003407514.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1663068 1665899 . - . ID=gene-AL55_RS13260;Name=acn;gbkey=Gene;gene=acn;gene_biotype=protein_coding;locus_tag=AL55_RS13260;old_locus_tag=AL55_01536 NZ_KK316828.1 Protein Homology CDS 1663068 1665899 . - 0 ID=cds-WP_003898889.1;Parent=gene-AL55_RS13260;Dbxref=GenBank:WP_003898889.1;Name=WP_003898889.1;gbkey=CDS;gene=acn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215991.1;locus_tag=AL55_RS13260;product=iron-regulated aconitate hydratase Acn;protein_id=WP_003898889.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1666057 1666617 . + . ID=gene-AL55_RS13265;Name=AL55_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13265;old_locus_tag=AL55_01537 NZ_KK316828.1 Protein Homology CDS 1666057 1666617 . + 0 ID=cds-WP_003407520.1;Parent=gene-AL55_RS13265;Dbxref=GenBank:WP_003407520.1;Name=WP_003407520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215992.1;locus_tag=AL55_RS13265;product=Rv1476 family membrane protein;protein_id=WP_003407520.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1666843 1668261 . + . ID=gene-AL55_RS13270;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;locus_tag=AL55_RS13270;old_locus_tag=AL55_01538 NZ_KK316828.1 Protein Homology CDS 1666843 1668261 . + 0 ID=cds-WP_003407523.1;Parent=gene-AL55_RS13270;Dbxref=GenBank:WP_003407523.1;Name=WP_003407523.1;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215993.1;locus_tag=AL55_RS13270;product=NlpC/P60 family peptidoglycan endopeptidase RipA;protein_id=WP_003407523.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1668272 1668997 . + . ID=gene-AL55_RS13275;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=AL55_RS13275;old_locus_tag=AL55_01539 NZ_KK316828.1 Protein Homology CDS 1668272 1668997 . + 0 ID=cds-WP_003407525.1;Parent=gene-AL55_RS13275;Dbxref=GenBank:WP_003407525.1;Name=WP_003407525.1;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215994.1;locus_tag=AL55_RS13275;product=NlpC/P60 family peptidoglycan endopeptidase RipB;protein_id=WP_003407525.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1669136 1670269 . + . ID=gene-AL55_RS13280;Name=moxR1;gbkey=Gene;gene=moxR1;gene_biotype=protein_coding;locus_tag=AL55_RS13280;old_locus_tag=AL55_01540 NZ_KK316828.1 Protein Homology CDS 1669136 1670269 . + 0 ID=cds-WP_003407527.1;Parent=gene-AL55_RS13280;Dbxref=GenBank:WP_003407527.1;Name=WP_003407527.1;gbkey=CDS;gene=moxR1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177816.1;locus_tag=AL55_RS13280;product=chaperone MoxR1;protein_id=WP_003407527.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1670266 1671219 . + . ID=gene-AL55_RS13285;Name=AL55_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13285;old_locus_tag=AL55_01541 NZ_KK316828.1 Protein Homology CDS 1670266 1671219 . + 0 ID=cds-WP_003407529.1;Parent=gene-AL55_RS13285;Dbxref=GenBank:WP_003407529.1;Name=WP_003407529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215996.1;locus_tag=AL55_RS13285;product=DUF58 domain-containing protein;protein_id=WP_003407529.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1671230 1672237 . + . ID=gene-AL55_RS13290;Name=AL55_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13290;old_locus_tag=AL55_01542 NZ_KK316828.1 Protein Homology CDS 1671230 1672237 . + 0 ID=cds-WP_003407530.1;Parent=gene-AL55_RS13290;Dbxref=GenBank:WP_003407530.1;Name=WP_003407530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215997.1;locus_tag=AL55_RS13290;product=VWA domain-containing protein;protein_id=WP_003407530.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1672310 1673152 . - . ID=gene-AL55_RS13295;Name=AL55_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13295;old_locus_tag=AL55_01543 NZ_KK316828.1 Protein Homology CDS 1672310 1673152 . - 0 ID=cds-WP_003407537.1;Parent=gene-AL55_RS13295;Dbxref=GenBank:WP_003407537.1;Name=WP_003407537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215998.2;locus_tag=AL55_RS13295;product=hypothetical protein;protein_id=WP_003407537.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1673293 1674036 . + . ID=gene-AL55_RS13300;Name=fabG1;gbkey=Gene;gene=fabG1;gene_biotype=protein_coding;gene_synonym=mabA;locus_tag=AL55_RS13300;old_locus_tag=AL55_01544 NZ_KK316828.1 Protein Homology CDS 1673293 1674036 . + 0 ID=cds-WP_003898892.1;Parent=gene-AL55_RS13300;Dbxref=GenBank:WP_003898892.1;Name=WP_003898892.1;gbkey=CDS;gene=fabG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215999.1;locus_tag=AL55_RS13300;product=3-oxoacyl-ACP reductase FabG1;protein_id=WP_003898892.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1674055 1674864 . + . ID=gene-AL55_RS13305;Name=inhA;gbkey=Gene;gene=inhA;gene_biotype=protein_coding;locus_tag=AL55_RS13305;old_locus_tag=AL55_01545 NZ_KK316828.1 Protein Homology CDS 1674055 1674864 . + 0 ID=cds-WP_003407553.1;Parent=gene-AL55_RS13305;Dbxref=GenBank:WP_003407553.1;Name=WP_003407553.1;Ontology_term=GO:0071768;gbkey=CDS;gene=inhA;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216000.1;locus_tag=AL55_RS13305;product=NADH-dependent enoyl-ACP reductase InhA;protein_id=WP_003407553.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1674870 1675904 . + . ID=gene-AL55_RS13310;Name=hemZ;gbkey=Gene;gene=hemZ;gene_biotype=protein_coding;locus_tag=AL55_RS13310;old_locus_tag=AL55_01546 NZ_KK316828.1 Protein Homology CDS 1674870 1675904 . + 0 ID=cds-WP_003407559.1;Parent=gene-AL55_RS13310;Dbxref=GenBank:WP_003407559.1;Name=WP_003407559.1;Ontology_term=GO:0006783,GO:0004325;gbkey=CDS;gene=hemZ;go_function=ferrochelatase activity|0004325||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216001.1;locus_tag=AL55_RS13310;product=ferrochelatase;protein_id=WP_003407559.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1675870 1676736 . - . ID=gene-AL55_RS13315;Name=AL55_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13315;old_locus_tag=AL55_01547 NZ_KK316828.1 Protein Homology CDS 1675870 1676736 . - 0 ID=cds-WP_003902086.1;Parent=gene-AL55_RS13315;Dbxref=GenBank:WP_003902086.1;Name=WP_003902086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216002.2;locus_tag=AL55_RS13315;product=hypothetical protein;protein_id=WP_003902086.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1676794 1677228 . + . ID=gene-AL55_RS13320;Name=AL55_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13320;old_locus_tag=AL55_01548 NZ_KK316828.1 Protein Homology CDS 1676794 1677228 . + 0 ID=cds-WP_003407562.1;Parent=gene-AL55_RS13320;Dbxref=GenBank:WP_003407562.1;Name=WP_003407562.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216003.1;locus_tag=AL55_RS13320;product=NfeD family protein;protein_id=WP_003407562.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1677250 1678395 . + . ID=gene-AL55_RS13325;Name=AL55_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13325;old_locus_tag=AL55_01549 NZ_KK316828.1 Protein Homology CDS 1677250 1678395 . + 0 ID=cds-WP_003407571.1;Parent=gene-AL55_RS13325;Dbxref=GenBank:WP_003407571.1;Name=WP_003407571.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216004.1;locus_tag=AL55_RS13325;product=SPFH domain-containing protein;protein_id=WP_003407571.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1678405 1678761 . + . ID=gene-AL55_RS13330;Name=AL55_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13330;old_locus_tag=AL55_01550 NZ_KK316828.1 Protein Homology CDS 1678405 1678761 . + 0 ID=cds-WP_003902087.1;Parent=gene-AL55_RS13330;Dbxref=GenBank:WP_003902087.1;Name=WP_003902087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177645.1;locus_tag=AL55_RS13330;product=DoxX family protein;protein_id=WP_003902087.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1678807 1678986 . + . ID=gene-AL55_RS13335;Name=AL55_RS13335;end_range=1678986,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS13335;old_locus_tag=AL55_01551;partial=true;pseudo=true;start_range=.,1678807 NZ_KK316828.1 Protein Homology CDS 1678807 1678986 . + 0 ID=cds-AL55_RS13335;Parent=gene-AL55_RS13335;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1678986,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903477.1;locus_tag=AL55_RS13335;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1678807;transl_table=11 NZ_KK316828.1 RefSeq gene 1679175 1680482 . + . ID=gene-AL55_RS13340;Name=AL55_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13340;old_locus_tag=AL55_01552 NZ_KK316828.1 Protein Homology CDS 1679175 1680482 . + 0 ID=cds-WP_003898896.1;Parent=gene-AL55_RS13340;Dbxref=GenBank:WP_003898896.1;Name=WP_003898896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216006.1;locus_tag=AL55_RS13340;product=membrane protein;protein_id=WP_003898896.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1680523 1680714 . + . ID=gene-AL55_RS28195;Name=AL55_RS28195;end_range=1680714,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28195;partial=true;pseudo=true;start_range=.,1680523 NZ_KK316828.1 Protein Homology CDS 1680523 1680714 . + 0 ID=cds-AL55_RS28195;Parent=gene-AL55_RS28195;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1680714,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015289458.1;locus_tag=AL55_RS28195;partial=true;product=transposase;pseudo=true;start_range=.,1680523;transl_table=11 NZ_KK316828.1 RefSeq gene 1681061 1681819 . - . ID=gene-AL55_RS13345;Name=AL55_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13345;old_locus_tag=AL55_01553 NZ_KK316828.1 Protein Homology CDS 1681061 1681819 . - 0 ID=cds-WP_003407583.1;Parent=gene-AL55_RS13345;Dbxref=GenBank:WP_003407583.1;Name=WP_003407583.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216007.1;locus_tag=AL55_RS13345;product=TVP38/TMEM64 family protein;protein_id=WP_003407583.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1682010 1683857 . + . ID=gene-AL55_RS13350;Name=mutA;gbkey=Gene;gene=mutA;gene_biotype=protein_coding;locus_tag=AL55_RS13350;old_locus_tag=AL55_01554 NZ_KK316828.1 Protein Homology CDS 1682010 1683857 . + 0 ID=cds-WP_003407585.1;Parent=gene-AL55_RS13350;Dbxref=GenBank:WP_003407585.1;Name=WP_003407585.1;Ontology_term=GO:0019652,GO:0004494;gbkey=CDS;gene=mutA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA;go_process=lactate fermentation to propionate and acetate|0019652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216008.1;locus_tag=AL55_RS13350;product=methylmalonyl-CoA mutase small subunit;protein_id=WP_003407585.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1683858 1686110 . + . ID=gene-AL55_RS13355;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=AL55_RS13355;old_locus_tag=AL55_01555 NZ_KK316828.1 Protein Homology CDS 1683858 1686110 . + 0 ID=cds-WP_003407587.1;Parent=gene-AL55_RS13355;Dbxref=GenBank:WP_003407587.1;Name=WP_003407587.1;Ontology_term=GO:0004494,GO:0031419,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,cobalamin binding|0031419||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216009.1;locus_tag=AL55_RS13355;product=methylmalonyl-CoA mutase;protein_id=WP_003407587.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1686124 1686426 . + . ID=gene-AL55_RS13360;Name=mazE4;gbkey=Gene;gene=mazE4;gene_biotype=protein_coding;locus_tag=AL55_RS13360;old_locus_tag=AL55_01556 NZ_KK316828.1 Protein Homology CDS 1686124 1686426 . + 0 ID=cds-WP_003900349.1;Parent=gene-AL55_RS13360;Dbxref=GenBank:WP_003900349.1;Name=WP_003900349.1;gbkey=CDS;gene=mazE4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216010.1;locus_tag=AL55_RS13360;product=type II toxin-antitoxin system antitoxin MazE4;protein_id=WP_003900349.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1686423 1686740 . + . ID=gene-AL55_RS13365;Name=mazF4;gbkey=Gene;gene=mazF4;gene_biotype=protein_coding;gene_synonym=mazF-mt7;locus_tag=AL55_RS13365;old_locus_tag=AL55_01557 NZ_KK316828.1 Protein Homology CDS 1686423 1686740 . + 0 ID=cds-WP_003407593.1;Parent=gene-AL55_RS13365;Dbxref=GenBank:WP_003407593.1;Name=WP_003407593.1;gbkey=CDS;gene=mazF4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216011.1;locus_tag=AL55_RS13365;product=type II toxin-antitoxin system toxin endoribonuclease MazF4;protein_id=WP_003407593.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1686737 1687741 . + . ID=gene-AL55_RS13370;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=AL55_RS13370;old_locus_tag=AL55_01558 NZ_KK316828.1 Protein Homology CDS 1686737 1687741 . + 0 ID=cds-WP_003407596.1;Parent=gene-AL55_RS13370;Dbxref=GenBank:WP_003407596.1;Name=WP_003407596.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216012.1;locus_tag=AL55_RS13370;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_003407596.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1687794 1689083 . + . ID=gene-AL55_RS13375;Name=lipL;gbkey=Gene;gene=lipL;gene_biotype=protein_coding;locus_tag=AL55_RS13375;old_locus_tag=AL55_01559 NZ_KK316828.1 Protein Homology CDS 1687794 1689083 . + 0 ID=cds-WP_003902090.1;Parent=gene-AL55_RS13375;Dbxref=GenBank:WP_003902090.1;Name=WP_003902090.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipL;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216013.1;locus_tag=AL55_RS13375;product=esterase/beta-lactamase LipL;protein_id=WP_003902090.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1689156 1689932 . - . ID=gene-AL55_RS13380;Name=AL55_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13380;old_locus_tag=AL55_01560 NZ_KK316828.1 Protein Homology CDS 1689156 1689932 . - 0 ID=cds-WP_305953045.1;Parent=gene-AL55_RS13380;Dbxref=GenBank:WP_305953045.1;Name=WP_305953045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898898.1;locus_tag=AL55_RS13380;product=class I SAM-dependent methyltransferase;protein_id=WP_305953045.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1689987 1690199 . - . ID=gene-AL55_RS13385;Name=AL55_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13385;old_locus_tag=AL55_01561 NZ_KK316828.1 Protein Homology CDS 1689987 1690199 . - 0 ID=cds-WP_003898900.1;Parent=gene-AL55_RS13385;Dbxref=GenBank:WP_003898900.1;Name=WP_003898900.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177647.1;locus_tag=AL55_RS13385;product=dodecin;protein_id=WP_003898900.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1690209 1690511 . - . ID=gene-AL55_RS28045;Name=AL55_RS28045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28045 NZ_KK316828.1 Protein Homology CDS 1690209 1690511 . - 0 ID=cds-WP_003407610.1;Parent=gene-AL55_RS28045;Dbxref=GenBank:WP_003407610.1;Name=WP_003407610.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012514.6;locus_tag=AL55_RS28045;product=NUDIX domain-containing protein;protein_id=WP_003407610.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1690703 1691731 . + . ID=gene-AL55_RS13395;Name=losA;gbkey=Gene;gene=losA;gene_biotype=protein_coding;gene_synonym=pimF;locus_tag=AL55_RS13395;old_locus_tag=AL55_01563 NZ_KK316828.1 Protein Homology CDS 1690703 1691731 . + 0 ID=cds-WP_003407612.1;Parent=gene-AL55_RS13395;Dbxref=GenBank:WP_003407612.1;Name=WP_003407612.1;gbkey=CDS;gene=losA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216016.1;locus_tag=AL55_RS13395;product=glycosyltransferase LosA;protein_id=WP_003407612.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1691743 1692564 . + . ID=gene-AL55_RS13400;Name=AL55_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13400;old_locus_tag=AL55_01564 NZ_KK316828.1 Protein Homology CDS 1691743 1692564 . + 0 ID=cds-WP_003898901.1;Parent=gene-AL55_RS13400;Dbxref=GenBank:WP_003898901.1;Name=WP_003898901.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216017.1;locus_tag=AL55_RS13400;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_003898901.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1692777 1693676 . + . ID=gene-AL55_RS13405;Name=AL55_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13405;old_locus_tag=AL55_01565 NZ_KK316828.1 Protein Homology CDS 1692777 1693676 . + 0 ID=cds-WP_003407616.1;Parent=gene-AL55_RS13405;Dbxref=GenBank:WP_003407616.1;Name=WP_003407616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216018.1;locus_tag=AL55_RS13405;product=glycoside hydrolase family protein;protein_id=WP_003407616.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1693849 1694997 . - . ID=gene-AL55_RS25885;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=pseudogene;gene_synonym=fcnA,wecE;locus_tag=AL55_RS25885;old_locus_tag=AL55_01566;pseudo=true NZ_KK316828.1 Protein Homology CDS 1693849 1694997 . - 0 ID=cds-AL55_RS25885;Parent=gene-AL55_RS25885;Note=internal stop;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950550.1;locus_tag=AL55_RS25885;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1695134 1695799 . - . ID=gene-AL55_RS13410;Name=AL55_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13410;old_locus_tag=AL55_01567 NZ_KK316828.1 Protein Homology CDS 1695134 1695799 . - 0 ID=cds-WP_003901181.1;Parent=gene-AL55_RS13410;Dbxref=GenBank:WP_003901181.1;Name=WP_003901181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216021.1;locus_tag=AL55_RS13410;product=acetyltransferase;protein_id=WP_003901181.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1695796 1696314 . - . ID=gene-AL55_RS13415;Name=AL55_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13415;old_locus_tag=AL55_01568 NZ_KK316828.1 Protein Homology CDS 1695796 1696314 . - 0 ID=cds-WP_003898904.1;Parent=gene-AL55_RS13415;Dbxref=GenBank:WP_003898904.1;Name=WP_003898904.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF019847.6;locus_tag=AL55_RS13415;product=class I SAM-dependent methyltransferase;protein_id=WP_003898904.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1696579 1697274 . - . ID=gene-AL55_RS13420;Name=AL55_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13420;old_locus_tag=AL55_01569 NZ_KK316828.1 Protein Homology CDS 1696579 1697274 . - 0 ID=cds-WP_031695402.1;Parent=gene-AL55_RS13420;Dbxref=GenBank:WP_031695402.1;Name=WP_031695402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216023.1;locus_tag=AL55_RS13420;product=WbqC family protein;protein_id=WP_031695402.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1697208 1697711 . + . ID=gene-AL55_RS13425;Name=AL55_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13425;old_locus_tag=AL55_01570 NZ_KK316828.1 Protein Homology CDS 1697208 1697711 . + 0 ID=cds-WP_003900353.1;Parent=gene-AL55_RS13425;Dbxref=GenBank:WP_003900353.1;Name=WP_003900353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177648.1;locus_tag=AL55_RS13425;product=hypothetical protein;protein_id=WP_003900353.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1697947 1699746 . - . ID=gene-AL55_RS13430;Name=AL55_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13430;old_locus_tag=AL55_01571 NZ_KK316828.1 Protein Homology CDS 1697947 1699746 . - 0 ID=cds-WP_003902092.1;Parent=gene-AL55_RS13430;Dbxref=GenBank:WP_003902092.1;Name=WP_003902092.1;Ontology_term=GO:0016758;gbkey=CDS;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216024.1;locus_tag=AL55_RS13430;product=glycosyltransferase 87 family protein;protein_id=WP_003902092.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1699811 1699930 . + . ID=gene-AL55_RS27680;Name=AL55_RS27680;end_range=1699930,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27680;partial=true;pseudo=true;start_range=.,1699811 NZ_KK316828.1 Protein Homology CDS 1699811 1699930 . + 0 ID=cds-AL55_RS27680;Parent=gene-AL55_RS27680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1699930,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216027.1;locus_tag=AL55_RS27680;partial=true;product=GDP-mannose 4%2C6-dehydratase;pseudo=true;start_range=.,1699811;transl_table=11 NZ_KK316828.1 RefSeq gene 1700064 1700945 . + . ID=gene-AL55_RS13440;Name=AL55_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13440;old_locus_tag=AL55_01573 NZ_KK316828.1 Protein Homology CDS 1700064 1700945 . + 0 ID=cds-WP_003407632.1;Parent=gene-AL55_RS13440;Dbxref=GenBank:WP_003407632.1;Name=WP_003407632.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216025.1;locus_tag=AL55_RS13440;product=class I SAM-dependent methyltransferase;protein_id=WP_003407632.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1701147 1702445 . + . ID=gene-AL55_RS13445;Name=AL55_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13445;old_locus_tag=AL55_01574 NZ_KK316828.1 Protein Homology CDS 1701147 1702445 . + 0 ID=cds-WP_003901183.1;Parent=gene-AL55_RS13445;Dbxref=GenBank:WP_003901183.1;Name=WP_003901183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216026.1;locus_tag=AL55_RS13445;product=hypothetical protein;protein_id=WP_003901183.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1702926 1703948 . + . ID=gene-AL55_RS13450;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AL55_RS13450;old_locus_tag=AL55_01575 NZ_KK316828.1 Protein Homology CDS 1702926 1703948 . + 0 ID=cds-WP_003407639.1;Parent=gene-AL55_RS13450;Dbxref=GenBank:WP_003407639.1;Name=WP_003407639.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216027.1;locus_tag=AL55_RS13450;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_003407639.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1703945 1704913 . + . ID=gene-AL55_RS13455;Name=epiA;gbkey=Gene;gene=epiA;gene_biotype=protein_coding;locus_tag=AL55_RS13455;old_locus_tag=AL55_01576 NZ_KK316828.1 Protein Homology CDS 1703945 1704913 . + 0 ID=cds-WP_003407642.1;Parent=gene-AL55_RS13455;Dbxref=GenBank:WP_003407642.1;Name=WP_003407642.1;Ontology_term=GO:0016491;gbkey=CDS;gene=epiA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216028.1;locus_tag=AL55_RS13455;product=GDP-L-fucose synthase family protein;protein_id=WP_003407642.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1704910 1705641 . + . ID=gene-AL55_RS13460;Name=AL55_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13460;old_locus_tag=AL55_01577 NZ_KK316828.1 Protein Homology CDS 1704910 1705641 . + 0 ID=cds-WP_003407647.1;Parent=gene-AL55_RS13460;Dbxref=GenBank:WP_003407647.1;Name=WP_003407647.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216029.1;locus_tag=AL55_RS13460;product=FkbM family methyltransferase;protein_id=WP_003407647.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1705659 1706447 . - . ID=gene-AL55_RS13465;Name=AL55_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13465;old_locus_tag=AL55_01578 NZ_KK316828.1 Protein Homology CDS 1705659 1706447 . - 0 ID=cds-WP_003407650.1;Parent=gene-AL55_RS13465;Dbxref=GenBank:WP_003407650.1;Name=WP_003407650.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216030.1;locus_tag=AL55_RS13465;product=glycosyltransferase family 2 protein;protein_id=WP_003407650.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1706482 1707378 . - . ID=gene-AL55_RS13470;Name=AL55_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13470;old_locus_tag=AL55_01579 NZ_KK316828.1 Protein Homology CDS 1706482 1707378 . - 0 ID=cds-WP_003905587.1;Parent=gene-AL55_RS13470;Dbxref=GenBank:WP_003905587.1;Name=WP_003905587.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216031.1;locus_tag=AL55_RS13470;product=class I SAM-dependent methyltransferase;protein_id=WP_003905587.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1707381 1708391 . - . ID=gene-AL55_RS13475;Name=AL55_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13475;old_locus_tag=AL55_01580 NZ_KK316828.1 Protein Homology CDS 1707381 1708391 . - 0 ID=cds-WP_003900357.1;Parent=gene-AL55_RS13475;Dbxref=GenBank:WP_003900357.1;Name=WP_003900357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216032.2;locus_tag=AL55_RS13475;product=glycosyltransferase;protein_id=WP_003900357.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1708723 1709487 . + . ID=gene-AL55_RS13480;Name=AL55_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13480;old_locus_tag=AL55_01581 NZ_KK316828.1 Protein Homology CDS 1708723 1709487 . + 0 ID=cds-WP_003407654.1;Parent=gene-AL55_RS13480;Dbxref=GenBank:WP_003407654.1;Name=WP_003407654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216033.1;locus_tag=AL55_RS13480;product=GAP family protein;protein_id=WP_003407654.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1709496 1710455 . + . ID=gene-AL55_RS13485;Name=AL55_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13485;old_locus_tag=AL55_01582 NZ_KK316828.1 Protein Homology CDS 1709496 1710455 . + 0 ID=cds-WP_003407655.1;Parent=gene-AL55_RS13485;Dbxref=GenBank:WP_003407655.1;Name=WP_003407655.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216034.1;locus_tag=AL55_RS13485;product=glycosyltransferase family 2 protein;protein_id=WP_003407655.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1710702 1710854 . + . ID=gene-AL55_RS27270;Name=AL55_RS27270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27270;partial=true;pseudo=true;start_range=.,1710702 NZ_KK316828.1 Protein Homology CDS 1710702 1710854 . + 0 ID=cds-AL55_RS27270;Parent=gene-AL55_RS27270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217919.1;locus_tag=AL55_RS27270;partial=true;product=DegT/DnrJ/EryC1/StrS family aminotransferase;pseudo=true;start_range=.,1710702;transl_table=11 NZ_KK316828.1 RefSeq gene 1710880 1711920 . + . ID=gene-AL55_RS13495;Name=AL55_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13495;old_locus_tag=AL55_01584 NZ_KK316828.1 Protein Homology CDS 1710880 1711920 . + 0 ID=cds-WP_003901186.1;Parent=gene-AL55_RS13495;Dbxref=GenBank:WP_003901186.1;Name=WP_003901186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216036.3;locus_tag=AL55_RS13495;product=glycosyltransferase;protein_id=WP_003901186.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1712154 1713905 . + . ID=gene-AL55_RS13500;Name=fadD25;gbkey=Gene;gene=fadD25;gene_biotype=protein_coding;gene_synonym=faaL25;locus_tag=AL55_RS13500;old_locus_tag=AL55_01585 NZ_KK316828.1 Protein Homology CDS 1712154 1713905 . + 0 ID=cds-WP_003901187.1;Parent=gene-AL55_RS13500;Dbxref=GenBank:WP_003901187.1;Name=WP_003901187.1;gbkey=CDS;gene=fadD25;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216037.1;locus_tag=AL55_RS13500;product=fatty-acid--AMP ligase FAAL25/FadD25;protein_id=WP_003901187.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1714024 1717464 . - . ID=gene-AL55_RS13505;Name=mmpL12;gbkey=Gene;gene=mmpL12;gene_biotype=protein_coding;locus_tag=AL55_RS13505;old_locus_tag=AL55_01586 NZ_KK316828.1 Protein Homology CDS 1714024 1717464 . - 0 ID=cds-WP_003901188.1;Parent=gene-AL55_RS13505;Dbxref=GenBank:WP_003901188.1;Name=WP_003901188.1;gbkey=CDS;gene=mmpL12;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216038.1;locus_tag=AL55_RS13505;product=RND transporter MmpL12;protein_id=WP_003901188.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1717505 1718548 . + . ID=gene-AL55_RS13510;Name=AL55_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13510;old_locus_tag=AL55_01587 NZ_KK316828.1 Protein Homology CDS 1717505 1718548 . + 0 ID=cds-WP_003407670.1;Parent=gene-AL55_RS13510;Dbxref=GenBank:WP_003407670.1;Name=WP_003407670.1;Ontology_term=GO:0071770,GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=DIM/DIP cell wall layer assembly|0071770||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216039.1;locus_tag=AL55_RS13510;product=phthiotriol/phenolphthiotriol dimycocerosates methyltransferase;protein_id=WP_003407670.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1718578 1719822 . + . ID=gene-AL55_RS13515;Name=AL55_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13515;old_locus_tag=AL55_01588 NZ_KK316828.1 Protein Homology CDS 1718578 1719822 . + 0 ID=cds-WP_003407671.1;Parent=gene-AL55_RS13515;Dbxref=GenBank:WP_003407671.1;Name=WP_003407671.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216040.1;locus_tag=AL55_RS13515;product=glycosyltransferase;protein_id=WP_003407671.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1719869 1720654 . + . ID=gene-AL55_RS13520;Name=AL55_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13520;old_locus_tag=AL55_01589 NZ_KK316828.1 Protein Homology CDS 1719869 1720654 . + 0 ID=cds-WP_003407672.1;Parent=gene-AL55_RS13520;Dbxref=GenBank:WP_003407672.1;Name=WP_003407672.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216041.1;locus_tag=AL55_RS13520;product=glycosyltransferase family 2 protein;protein_id=WP_003407672.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1720632 1721912 . - . ID=gene-AL55_RS13525;Name=AL55_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13525;old_locus_tag=AL55_01590 NZ_KK316828.1 Protein Homology CDS 1720632 1721912 . - 0 ID=cds-WP_003407676.1;Parent=gene-AL55_RS13525;Dbxref=GenBank:WP_003407676.1;Name=WP_003407676.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216042.1;locus_tag=AL55_RS13525;product=glycosyltransferase;protein_id=WP_003407676.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1721935 1728261 . - . ID=gene-AL55_RS13530;Name=pks2;gbkey=Gene;gene=pks2;gene_biotype=protein_coding;locus_tag=AL55_RS13530;old_locus_tag=AL55_01591 NZ_KK316828.1 Protein Homology CDS 1721935 1728261 . - 0 ID=cds-WP_003901190.1;Parent=gene-AL55_RS13530;Dbxref=GenBank:WP_003901190.1;Name=WP_003901190.1;gbkey=CDS;gene=pks2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216043.1;locus_tag=AL55_RS13530;product=sulfolipid-1 biosynthesis phthioceranic/hydroxyphthioceranic acid synthase;protein_id=WP_003901190.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1728805 1729302 . - . ID=gene-AL55_RS13535;Name=AL55_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13535;old_locus_tag=AL55_01592 NZ_KK316828.1 Protein Homology CDS 1728805 1729302 . - 0 ID=cds-WP_003898919.1;Parent=gene-AL55_RS13535;Dbxref=GenBank:WP_003898919.1;Name=WP_003898919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216044.1;locus_tag=AL55_RS13535;product=polyketide synthase;protein_id=WP_003898919.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1729354 1731108 . + . ID=gene-AL55_RS13540;Name=fadD24;gbkey=Gene;gene=fadD24;gene_biotype=protein_coding;gene_synonym=faaL24;locus_tag=AL55_RS13540;old_locus_tag=AL55_01593 NZ_KK316828.1 Protein Homology CDS 1729354 1731108 . + 0 ID=cds-WP_003898920.1;Parent=gene-AL55_RS13540;Dbxref=GenBank:WP_003898920.1;Name=WP_003898920.1;gbkey=CDS;gene=fadD24;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216045.1;locus_tag=AL55_RS13540;product=fatty-acid--AMP ligase FAAL24/FadD24;protein_id=WP_003898920.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1731225 1732328 . + . ID=gene-AL55_RS13545;Name=adh;gbkey=Gene;gene=adh;gene_biotype=protein_coding;locus_tag=AL55_RS13545;old_locus_tag=AL55_01594 NZ_KK316828.1 Protein Homology CDS 1731225 1732328 . + 0 ID=cds-WP_003407690.1;Parent=gene-AL55_RS13545;Dbxref=GenBank:WP_003407690.1;Name=WP_003407690.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=adh;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216046.1;locus_tag=AL55_RS13545;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_003407690.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1732325 1732891 . + . ID=gene-AL55_RS13550;Name=AL55_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13550;old_locus_tag=AL55_01595 NZ_KK316828.1 Protein Homology CDS 1732325 1732891 . + 0 ID=cds-WP_003407692.1;Parent=gene-AL55_RS13550;Dbxref=GenBank:WP_003407692.1;Name=WP_003407692.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216047.1;locus_tag=AL55_RS13550;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003407692.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1732968 1733402 . - . ID=gene-AL55_RS13555;Name=AL55_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13555;old_locus_tag=AL55_01596 NZ_KK316828.1 Protein Homology CDS 1732968 1733402 . - 0 ID=cds-WP_003905590.1;Parent=gene-AL55_RS13555;Dbxref=GenBank:WP_003905590.1;Name=WP_003905590.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216048.1;locus_tag=AL55_RS13555;product=PaaI family thioesterase;protein_id=WP_003905590.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1733462 1734589 . + . ID=gene-AL55_RS13560;Name=AL55_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13560;old_locus_tag=AL55_01597 NZ_KK316828.1 Protein Homology CDS 1733462 1734589 . + 0 ID=cds-WP_003898921.1;Parent=gene-AL55_RS13560;Dbxref=GenBank:WP_003898921.1;Name=WP_003898921.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216049.1;locus_tag=AL55_RS13560;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_003898921.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1734586 1735263 . + . ID=gene-AL55_RS13565;Name=AL55_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13565;old_locus_tag=AL55_01598 NZ_KK316828.1 Protein Homology CDS 1734586 1735263 . + 0 ID=cds-WP_003407700.1;Parent=gene-AL55_RS13565;Dbxref=GenBank:WP_003407700.1;Name=WP_003407700.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216050.1;locus_tag=AL55_RS13565;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003407700.1;transl_table=11 NZ_KK316828.1 cmsearch riboswitch 1735361 1735530 . + . ID=id-NZ_KK316828.1:1735361..1735530;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316828.1 RefSeq gene 1735828 1736064 . + . ID=gene-AL55_RS13570;Name=AL55_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13570;old_locus_tag=AL55_01599 NZ_KK316828.1 Protein Homology CDS 1735828 1736064 . + 0 ID=cds-WP_003407710.1;Parent=gene-AL55_RS13570;Dbxref=GenBank:WP_003407710.1;Name=WP_003407710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216051.1;locus_tag=AL55_RS13570;product=Rv1535 family protein;protein_id=WP_003407710.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1736371 1739496 . + . ID=gene-AL55_RS13575;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AL55_RS13575;old_locus_tag=AL55_01600 NZ_KK316828.1 Protein Homology CDS 1736371 1739496 . + 0 ID=cds-WP_003407714.1;Parent=gene-AL55_RS13575;Dbxref=GenBank:WP_003407714.1;Name=WP_003407714.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216052.1;locus_tag=AL55_RS13575;product=isoleucine--tRNA ligase;protein_id=WP_003407714.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1739708 1741099 . + . ID=gene-AL55_RS13580;Name=dinX;gbkey=Gene;gene=dinX;gene_biotype=protein_coding;locus_tag=AL55_RS13580;old_locus_tag=AL55_01601 NZ_KK316828.1 Protein Homology CDS 1739708 1741099 . + 0 ID=cds-WP_003904641.1;Parent=gene-AL55_RS13580;Dbxref=GenBank:WP_003904641.1;Name=WP_003904641.1;Ontology_term=GO:0006260,GO:0003887;gbkey=CDS;gene=dinX;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216053.3;locus_tag=AL55_RS13580;product=DNA polymerase IV;protein_id=WP_003904641.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1741064 1742044 . - . ID=gene-AL55_RS13585;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AL55_RS13585;old_locus_tag=AL55_01602 NZ_KK316828.1 Protein Homology CDS 1741064 1742044 . - 0 ID=cds-WP_003905591.1;Parent=gene-AL55_RS13585;Dbxref=GenBank:WP_003905591.1;Name=WP_003905591.1;gbkey=CDS;gene=ansA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216054.1;locus_tag=AL55_RS13585;product=asparaginase;protein_id=WP_003905591.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1742096 1742704 . + . ID=gene-AL55_RS13590;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AL55_RS13590;old_locus_tag=AL55_01603 NZ_KK316828.1 Protein Homology CDS 1742096 1742704 . + 0 ID=cds-WP_003407722.1;Parent=gene-AL55_RS13590;Dbxref=GenBank:WP_003407722.1;Name=WP_003407722.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216055.1;locus_tag=AL55_RS13590;product=signal peptidase II;protein_id=WP_003407722.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1742697 1743623 . + . ID=gene-AL55_RS13595;Name=AL55_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13595;old_locus_tag=AL55_01604 NZ_KK316828.1 Protein Homology CDS 1742697 1743623 . + 0 ID=cds-WP_003407723.1;Parent=gene-AL55_RS13595;Dbxref=GenBank:WP_003407723.1;Name=WP_003407723.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216056.1;locus_tag=AL55_RS13595;product=RluA family pseudouridine synthase;protein_id=WP_003407723.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1743630 1744223 . - . ID=gene-AL55_RS13600;Name=lprI;gbkey=Gene;gene=lprI;gene_biotype=protein_coding;locus_tag=AL55_RS13600;old_locus_tag=AL55_01605 NZ_KK316828.1 Protein Homology CDS 1743630 1744223 . - 0 ID=cds-WP_031695403.1;Parent=gene-AL55_RS13600;Dbxref=GenBank:WP_031695403.1;Name=WP_031695403.1;gbkey=CDS;gene=lprI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216057.1;locus_tag=AL55_RS13600;product=lysozyme inhibitor LprI family protein;protein_id=WP_031695403.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1744278 1744688 . - . ID=gene-AL55_RS13605;Name=glbN;gbkey=Gene;gene=glbN;gene_biotype=protein_coding;locus_tag=AL55_RS13605;old_locus_tag=AL55_01606 NZ_KK316828.1 Protein Homology CDS 1744278 1744688 . - 0 ID=cds-WP_003407730.1;Parent=gene-AL55_RS13605;Dbxref=GenBank:WP_003407730.1;Name=WP_003407730.1;gbkey=CDS;gene=glbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216058.1;locus_tag=AL55_RS13605;product=group 1 truncated hemoglobin GlbN;protein_id=WP_003407730.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1744916 1745941 . + . ID=gene-AL55_RS13610;Name=AL55_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13610;old_locus_tag=AL55_01607 NZ_KK316828.1 Protein Homology CDS 1744916 1745941 . + 0 ID=cds-WP_003407734.1;Parent=gene-AL55_RS13610;Dbxref=GenBank:WP_003407734.1;Name=WP_003407734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216059.1;locus_tag=AL55_RS13610;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003407734.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1745946 1746749 . + . ID=gene-AL55_RS13615;Name=AL55_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13615;old_locus_tag=AL55_01608 NZ_KK316828.1 Protein Homology CDS 1745946 1746749 . + 0 ID=cds-WP_003407737.1;Parent=gene-AL55_RS13615;Dbxref=GenBank:WP_003407737.1;Name=WP_003407737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216060.1;locus_tag=AL55_RS13615;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003407737.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1746771 1746998 . + . ID=gene-AL55_RS13620;Name=AL55_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13620;old_locus_tag=AL55_01609 NZ_KK316828.1 Protein Homology CDS 1746771 1746998 . + 0 ID=cds-WP_003901194.1;Parent=gene-AL55_RS13620;Dbxref=GenBank:WP_003901194.1;Name=WP_003901194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216061.1;locus_tag=AL55_RS13620;product=hypothetical protein;protein_id=WP_003901194.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1747047 1747478 . + . ID=gene-AL55_RS13625;Name=AL55_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13625;old_locus_tag=AL55_01610 NZ_KK316828.1 Protein Homology CDS 1747047 1747478 . + 0 ID=cds-WP_003407748.1;Parent=gene-AL55_RS13625;Dbxref=GenBank:WP_003407748.1;Name=WP_003407748.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216062.1;locus_tag=AL55_RS13625;product=type II toxin-antitoxin system Rv0910 family toxin;protein_id=WP_003407748.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1747546 1751100 . + . ID=gene-AL55_RS13630;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AL55_RS13630;old_locus_tag=AL55_01611 NZ_KK316828.1 Protein Homology CDS 1747546 1751100 . + 0 ID=cds-WP_003407751.1;Parent=gene-AL55_RS13630;Dbxref=GenBank:WP_003407751.1;Name=WP_003407751.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216063.1;locus_tag=AL55_RS13630;product=DNA polymerase III subunit alpha;protein_id=WP_003407751.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1751149 1753185 . - . ID=gene-AL55_RS13635;Name=AL55_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13635;old_locus_tag=AL55_01612 NZ_KK316828.1 Protein Homology CDS 1751149 1753185 . - 0 ID=cds-WP_003903497.1;Parent=gene-AL55_RS13635;Dbxref=GenBank:WP_003903497.1;Name=WP_003903497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177817.1;locus_tag=AL55_RS13635;product=PPE family protein;protein_id=WP_003903497.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1753459 1755284 . + . ID=gene-AL55_RS13640;Name=fadD11;gbkey=Gene;gene=fadD11;gene_biotype=pseudogene;locus_tag=AL55_RS13640;old_locus_tag=AL55_01614;pseudo=true NZ_KK316828.1 Protein Homology CDS 1753459 1755284 . + 0 ID=cds-AL55_RS13640;Parent=gene-AL55_RS13640;Note=frameshifted;gbkey=CDS;gene=fadD11;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014380383.1;locus_tag=AL55_RS13640;product=fatty acid--CoA ligase FadD11;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1755574 1757162 . + . ID=gene-AL55_RS0104730;Name=AL55_RS0104730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0104730;pseudo=true NZ_KK316828.1 Protein Homology CDS 1755574 1757162 . + 0 ID=cds-AL55_RS0104730;Parent=gene-AL55_RS0104730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039580.5;locus_tag=AL55_RS0104730;product=lysophospholipid acyltransferase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1757290 1757523 . + . ID=gene-AL55_RS0104735;Name=AL55_RS0104735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104735 NZ_KK316828.1 Protein Homology CDS 1757290 1757523 . + 0 ID=cds-WP_003407763.1;Parent=gene-AL55_RS0104735;Dbxref=GenBank:WP_003407763.1;Name=WP_003407763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003407763.1;locus_tag=AL55_RS0104735;product=hypothetical protein;protein_id=WP_003407763.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1757533 1759284 . + . ID=gene-AL55_RS13645;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=AL55_RS13645;old_locus_tag=AL55_01616 NZ_KK316828.1 Protein Homology CDS 1757533 1759284 . + 0 ID=cds-WP_031695405.1;Parent=gene-AL55_RS13645;Dbxref=GenBank:WP_031695405.1;Name=WP_031695405.1;Ontology_term=GO:0009061,GO:0000104;gbkey=CDS;gene=frdA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216068.1;locus_tag=AL55_RS13645;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_031695405.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1759287 1760030 . + . ID=gene-AL55_RS13650;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=AL55_RS13650;old_locus_tag=AL55_01617 NZ_KK316828.1 Protein Homology CDS 1759287 1760030 . + 0 ID=cds-WP_003407767.1;Parent=gene-AL55_RS13650;Dbxref=GenBank:WP_003407767.1;Name=WP_003407767.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216069.1;locus_tag=AL55_RS13650;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_003407767.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1760027 1760407 . + . ID=gene-AL55_RS13655;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=AL55_RS13655;old_locus_tag=AL55_01618 NZ_KK316828.1 Protein Homology CDS 1760027 1760407 . + 0 ID=cds-WP_003407768.1;Parent=gene-AL55_RS13655;Dbxref=GenBank:WP_003407768.1;Name=WP_003407768.1;gbkey=CDS;gene=frdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216070.1;locus_tag=AL55_RS13655;product=fumarate reductase subunit C;protein_id=WP_003407768.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1760404 1760781 . + . ID=gene-AL55_RS13660;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=AL55_RS13660;old_locus_tag=AL55_01619 NZ_KK316828.1 Protein Homology CDS 1760404 1760781 . + 0 ID=cds-WP_003407771.1;Parent=gene-AL55_RS13660;Dbxref=GenBank:WP_003407771.1;Name=WP_003407771.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216071.1;locus_tag=AL55_RS13660;product=fumarate reductase subunit FrdD;protein_id=WP_003407771.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1760849 1761457 . + . ID=gene-AL55_RS13665;Name=AL55_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13665;old_locus_tag=AL55_01620 NZ_KK316828.1 Protein Homology CDS 1760849 1761457 . + 0 ID=cds-WP_003407773.1;Parent=gene-AL55_RS13665;Dbxref=GenBank:WP_003407773.1;Name=WP_003407773.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216072.1;locus_tag=AL55_RS13665;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003407773.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1761644 1762789 . + . ID=gene-AL55_RS13670;Name=AL55_RS13670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS13670;old_locus_tag=AL55_01621;partial=true;pseudo=true;start_range=.,1761644 NZ_KK316828.1 Protein Homology CDS 1761644 1762789 . + 0 ID=cds-AL55_RS13670;Parent=gene-AL55_RS13670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293038.1;locus_tag=AL55_RS13670;partial=true;product=MMPL family transporter;pseudo=true;start_range=.,1761644;transl_table=11 NZ_KK316828.1 RefSeq gene 1762799 1763245 . + . ID=gene-AL55_RS13675;Name=AL55_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13675;old_locus_tag=AL55_01622 NZ_KK316828.1 Protein Homology CDS 1762799 1763245 . + 0 ID=cds-WP_003407780.1;Parent=gene-AL55_RS13675;Dbxref=GenBank:WP_003407780.1;Name=WP_003407780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216074.1;locus_tag=AL55_RS13675;product=F420H(2)-dependent quinone reductase;protein_id=WP_003407780.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1763280 1764569 . + . ID=gene-AL55_RS13680;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=AL55_RS13680;old_locus_tag=AL55_01623 NZ_KK316828.1 Protein Homology CDS 1763280 1764569 . + 0 ID=cds-WP_003407781.1;Parent=gene-AL55_RS13680;Dbxref=GenBank:WP_003407781.1;Name=WP_003407781.1;Ontology_term=GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216075.1;locus_tag=AL55_RS13680;product=threonine ammonia-lyase;protein_id=WP_003407781.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1764622 1764825 . + . ID=gene-AL55_RS13685;Name=AL55_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13685;old_locus_tag=AL55_01624 NZ_KK316828.1 Protein Homology CDS 1764622 1764825 . + 0 ID=cds-WP_009935474.1;Parent=gene-AL55_RS13685;Dbxref=GenBank:WP_009935474.1;Name=WP_009935474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935474.1;locus_tag=AL55_RS13685;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_009935474.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1764831 1765235 . + . ID=gene-AL55_RS13690;Name=vapc11;gbkey=Gene;gene=vapc11;gene_biotype=protein_coding;locus_tag=AL55_RS13690;old_locus_tag=AL55_01625 NZ_KK316828.1 Protein Homology CDS 1764831 1765235 . + 0 ID=cds-WP_003407786.1;Parent=gene-AL55_RS13690;Dbxref=GenBank:WP_003407786.1;Name=WP_003407786.1;gbkey=CDS;gene=vapc11;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216077.1;locus_tag=AL55_RS13690;product=type II toxin-antitoxin system toxin ribonuclease VapC11;protein_id=WP_003407786.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1765252 1766994 . - . ID=gene-AL55_RS13695;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=AL55_RS13695;old_locus_tag=AL55_01626 NZ_KK316828.1 Protein Homology CDS 1765252 1766994 . - 0 ID=cds-WP_003407788.1;Parent=gene-AL55_RS13695;Dbxref=GenBank:WP_003407788.1;Name=WP_003407788.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177819.1;locus_tag=AL55_RS13695;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_003407788.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1766987 1769284 . - . ID=gene-AL55_RS13700;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=AL55_RS13700;old_locus_tag=AL55_01627 NZ_KK316828.1 Protein Homology CDS 1766987 1769284 . - 0 ID=cds-WP_003407790.1;Parent=gene-AL55_RS13700;Dbxref=GenBank:WP_003407790.1;Name=WP_003407790.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177820.1;locus_tag=AL55_RS13700;product=malto-oligosyltrehalose synthase;protein_id=WP_003407790.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1769288 1771453 . - . ID=gene-AL55_RS13705;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=AL55_RS13705;old_locus_tag=AL55_01628 NZ_KK316828.1 Protein Homology CDS 1769288 1771453 . - 0 ID=cds-WP_003898930.1;Parent=gene-AL55_RS13705;Dbxref=GenBank:WP_003898930.1;Name=WP_003898930.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177821.1;locus_tag=AL55_RS13705;product=glycogen debranching protein GlgX;protein_id=WP_003898930.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1771492 1773681 . - . ID=gene-AL55_RS13710;Name=AL55_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13710;old_locus_tag=AL55_01629 NZ_KK316828.1 Protein Homology CDS 1771492 1773681 . - 0 ID=cds-WP_003407794.1;Parent=gene-AL55_RS13710;Dbxref=GenBank:WP_003407794.1;Name=WP_003407794.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216081.1;locus_tag=AL55_RS13710;product=acyltransferase family protein;protein_id=WP_003407794.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1773780 1774457 . - . ID=gene-AL55_RS13715;Name=ripD;gbkey=Gene;gene=ripD;gene_biotype=protein_coding;locus_tag=AL55_RS13715;old_locus_tag=AL55_01630 NZ_KK316828.1 Protein Homology CDS 1773780 1774457 . - 0 ID=cds-WP_003912644.1;Parent=gene-AL55_RS13715;Dbxref=GenBank:WP_003912644.1;Name=WP_003912644.1;gbkey=CDS;gene=ripD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216082.1;locus_tag=AL55_RS13715;product=NlpC/P60 family peptidoglycan-binding protein RipD;protein_id=WP_003912644.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1774697 1775146 . - . ID=gene-AL55_RS27275;Name=AL55_RS27275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27275 NZ_KK316828.1 Protein Homology CDS 1774697 1775146 . - 0 ID=cds-WP_003911567.1;Parent=gene-AL55_RS27275;Dbxref=GenBank:WP_003911567.1;Name=WP_003911567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020424437.1;locus_tag=AL55_RS27275;product=hypothetical protein;protein_id=WP_003911567.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1775229 1776542 . + . ID=gene-AL55_RS13720;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AL55_RS13720;old_locus_tag=AL55_01632 NZ_KK316828.1 Protein Homology CDS 1775229 1776542 . + 0 ID=cds-WP_003407803.1;Parent=gene-AL55_RS13720;Dbxref=GenBank:WP_003407803.1;Name=WP_003407803.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216084.1;locus_tag=AL55_RS13720;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_003407803.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1776539 1777699 . + . ID=gene-AL55_RS13725;Name=AL55_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13725;old_locus_tag=AL55_01633 NZ_KK316828.1 Protein Homology CDS 1776539 1777699 . + 0 ID=cds-WP_003407805.1;Parent=gene-AL55_RS13725;Dbxref=GenBank:WP_003407805.1;Name=WP_003407805.1;Ontology_term=GO:0009102,GO:0008710,GO:0030170,GO:0042803;gbkey=CDS;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA,pyridoxal phosphate binding|0030170||IEA,protein homodimerization activity|0042803||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177822.1;locus_tag=AL55_RS13725;product=8-amino-7-oxononanoate synthase;protein_id=WP_003407805.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1777696 1778376 . + . ID=gene-AL55_RS13730;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AL55_RS13730;old_locus_tag=AL55_01634 NZ_KK316828.1 Protein Homology CDS 1777696 1778376 . + 0 ID=cds-WP_003407806.1;Parent=gene-AL55_RS13730;Dbxref=GenBank:WP_003407806.1;Name=WP_003407806.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216086.1;locus_tag=AL55_RS13730;product=dethiobiotin synthase;protein_id=WP_003407806.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1778376 1778885 . + . ID=gene-AL55_RS13735;Name=AL55_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13735;old_locus_tag=AL55_01635 NZ_KK316828.1 Protein Homology CDS 1778376 1778885 . + 0 ID=cds-WP_003407809.1;Parent=gene-AL55_RS13735;Dbxref=GenBank:WP_003407809.1;Name=WP_003407809.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216087.1;locus_tag=AL55_RS13735;product=2'-5' RNA ligase family protein;protein_id=WP_003407809.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1779031 1780426 . - . ID=gene-AL55_RS13740;Name=AL55_RS13740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS13740;old_locus_tag=AL55_01636;pseudo=true NZ_KK316828.1 Protein Homology CDS 1779031 1780426 . - 0 ID=cds-AL55_RS13740;Parent=gene-AL55_RS13740;Note=frameshifted;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293051.1;locus_tag=AL55_RS13740;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1780874 1781923 . + . ID=gene-AL55_RS13745;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AL55_RS13745;old_locus_tag=AL55_01638 NZ_KK316828.1 Protein Homology CDS 1780874 1781923 . + 0 ID=cds-WP_003898934.1;Parent=gene-AL55_RS13745;Dbxref=GenBank:WP_003898934.1;Name=WP_003898934.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216105.1;locus_tag=AL55_RS13745;product=biotin synthase BioB;protein_id=WP_003898934.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1781924 1782163 . + . ID=gene-AL55_RS13750;Name=AL55_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13750;old_locus_tag=AL55_01639 NZ_KK316828.1 Protein Homology CDS 1781924 1782163 . + 0 ID=cds-WP_003407914.1;Parent=gene-AL55_RS13750;Dbxref=GenBank:WP_003407914.1;Name=WP_003407914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216106.1;locus_tag=AL55_RS13750;product=biotin synthase auxiliary protein BsaP;protein_id=WP_003407914.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1782160 1782825 . + . ID=gene-AL55_RS13755;Name=AL55_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13755;old_locus_tag=AL55_01640 NZ_KK316828.1 Protein Homology CDS 1782160 1782825 . + 0 ID=cds-WP_003407924.1;Parent=gene-AL55_RS13755;Dbxref=GenBank:WP_003407924.1;Name=WP_003407924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216107.1;locus_tag=AL55_RS13755;product=DUF2567 domain-containing protein;protein_id=WP_003407924.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1782990 1784330 . - . ID=gene-AL55_RS13760;Name=AL55_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13760;old_locus_tag=AL55_01641 NZ_KK316828.1 Protein Homology CDS 1782990 1784330 . - 0 ID=cds-WP_003407926.1;Parent=gene-AL55_RS13760;Dbxref=GenBank:WP_003407926.1;Name=WP_003407926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216108.1;locus_tag=AL55_RS13760;product=lipase family protein;protein_id=WP_003407926.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1784587 1785297 . - . ID=gene-AL55_RS13765;Name=AL55_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13765;old_locus_tag=AL55_01642 NZ_KK316828.1 Protein Homology CDS 1784587 1785297 . - 0 ID=cds-WP_003898937.1;Parent=gene-AL55_RS13765;Dbxref=GenBank:WP_003898937.1;Name=WP_003898937.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216109.1;locus_tag=AL55_RS13765;product=NUDIX hydrolase;protein_id=WP_003898937.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1785346 1786395 . + . ID=gene-AL55_RS13770;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AL55_RS13770;old_locus_tag=AL55_01643 NZ_KK316828.1 Protein Homology CDS 1785346 1786395 . + 0 ID=cds-WP_003407931.1;Parent=gene-AL55_RS13770;Dbxref=GenBank:WP_003407931.1;Name=WP_003407931.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011894476.1;locus_tag=AL55_RS13770;product=quinolinate synthase NadA;protein_id=WP_003407931.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1786395 1787978 . + . ID=gene-AL55_RS13775;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=AL55_RS13775;old_locus_tag=AL55_01644 NZ_KK316828.1 Protein Homology CDS 1786395 1787978 . + 0 ID=cds-WP_003901204.1;Parent=gene-AL55_RS13775;Dbxref=GenBank:WP_003901204.1;Name=WP_003901204.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216111.1;locus_tag=AL55_RS13775;product=L-aspartate oxidase;protein_id=WP_003901204.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1787978 1788835 . + . ID=gene-AL55_RS13780;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=AL55_RS13780;old_locus_tag=AL55_01645 NZ_KK316828.1 Protein Homology CDS 1787978 1788835 . + 0 ID=cds-WP_003898939.1;Parent=gene-AL55_RS13780;Dbxref=GenBank:WP_003898939.1;Name=WP_003898939.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216112.1;locus_tag=AL55_RS13780;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_003898939.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1788884 1789642 . + . ID=gene-AL55_RS13785;Name=AL55_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13785;old_locus_tag=AL55_01646 NZ_KK316828.1 Protein Homology CDS 1788884 1789642 . + 0 ID=cds-WP_003898940.1;Parent=gene-AL55_RS13785;Dbxref=GenBank:WP_003898940.1;Name=WP_003898940.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216113.1;locus_tag=AL55_RS13785;product=methyltransferase domain-containing protein;protein_id=WP_003898940.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1789663 1790073 . - . ID=gene-AL55_RS13790;Name=AL55_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13790;old_locus_tag=AL55_01647 NZ_KK316828.1 Protein Homology CDS 1789663 1790073 . - 0 ID=cds-WP_003407939.1;Parent=gene-AL55_RS13790;Dbxref=GenBank:WP_003407939.1;Name=WP_003407939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216114.1;locus_tag=AL55_RS13790;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003407939.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1790173 1791489 . + . ID=gene-AL55_RS13795;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AL55_RS13795;old_locus_tag=AL55_01648 NZ_KK316828.1 Protein Homology CDS 1790173 1791489 . + 0 ID=cds-WP_003407943.1;Parent=gene-AL55_RS13795;Dbxref=GenBank:WP_003407943.1;Name=WP_003407943.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216115.1;locus_tag=AL55_RS13795;product=histidinol dehydrogenase;protein_id=WP_003407943.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1791486 1792628 . + . ID=gene-AL55_RS13800;Name=AL55_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13800;old_locus_tag=AL55_01649 NZ_KK316828.1 Protein Homology CDS 1791486 1792628 . + 0 ID=cds-WP_003407947.1;Parent=gene-AL55_RS13800;Dbxref=GenBank:WP_003407947.1;Name=WP_003407947.1;Ontology_term=GO:0000105,GO:0004400,GO:0030170;gbkey=CDS;go_function=histidinol-phosphate transaminase activity|0004400||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177823.1;locus_tag=AL55_RS13800;product=histidinol-phosphate transaminase;protein_id=WP_003407947.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1792625 1793257 . + . ID=gene-AL55_RS13805;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=AL55_RS13805;old_locus_tag=AL55_01650 NZ_KK316828.1 Protein Homology CDS 1792625 1793257 . + 0 ID=cds-WP_003407950.1;Parent=gene-AL55_RS13805;Dbxref=GenBank:WP_003407950.1;Name=WP_003407950.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216117.1;locus_tag=AL55_RS13805;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_003407950.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1793254 1793874 . + . ID=gene-AL55_RS13810;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AL55_RS13810;old_locus_tag=AL55_01651 NZ_KK316828.1 Protein Homology CDS 1793254 1793874 . + 0 ID=cds-WP_003407952.1;Parent=gene-AL55_RS13810;Dbxref=GenBank:WP_003407952.1;Name=WP_003407952.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216118.1;locus_tag=AL55_RS13810;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_003407952.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1793884 1794621 . + . ID=gene-AL55_RS13815;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AL55_RS13815;old_locus_tag=AL55_01652 NZ_KK316828.1 Protein Homology CDS 1793884 1794621 . + 0 ID=cds-WP_003900374.1;Parent=gene-AL55_RS13815;Dbxref=GenBank:WP_003900374.1;Name=WP_003900374.1;Ontology_term=GO:0000105,GO:0000162,GO:0003949,GO:0004640,GO:0005737;gbkey=CDS;gene=priA;go_component=cytoplasm|0005737||IEA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-histidine biosynthetic process|0000105||IEA,L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216119.1;locus_tag=AL55_RS13815;product=bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA;protein_id=WP_003900374.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1794629 1795441 . + . ID=gene-AL55_RS13820;Name=impA;gbkey=Gene;gene=impA;gene_biotype=protein_coding;locus_tag=AL55_RS13820;old_locus_tag=AL55_01653 NZ_KK316828.1 Protein Homology CDS 1794629 1795441 . + 0 ID=cds-WP_003407957.1;Parent=gene-AL55_RS13820;Dbxref=GenBank:WP_003407957.1;Name=WP_003407957.1;gbkey=CDS;gene=impA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216120.1;locus_tag=AL55_RS13820;product=inositol monophosphatase family protein;protein_id=WP_003407957.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1795443 1796246 . + . ID=gene-AL55_RS13825;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=AL55_RS13825;old_locus_tag=AL55_01654 NZ_KK316828.1 Protein Homology CDS 1795443 1796246 . + 0 ID=cds-WP_003898942.1;Parent=gene-AL55_RS13825;Dbxref=GenBank:WP_003898942.1;Name=WP_003898942.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216121.1;locus_tag=AL55_RS13825;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_003898942.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1796243 1796590 . + . ID=gene-AL55_RS13830;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=AL55_RS13830;old_locus_tag=AL55_01655 NZ_KK316828.1 Protein Homology CDS 1796243 1796590 . + 0 ID=cds-WP_003407963.1;Parent=gene-AL55_RS13830;Dbxref=GenBank:WP_003407963.1;Name=WP_003407963.1;Ontology_term=GO:0000105,GO:0004635;gbkey=CDS;gene=hisI;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216638.2;locus_tag=AL55_RS13830;product=phosphoribosyl-AMP cyclohydrolase;protein_id=WP_003407963.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1796771 1797853 . + . ID=gene-AL55_RS13835;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=AL55_RS13835;old_locus_tag=AL55_01656 NZ_KK316828.1 Protein Homology CDS 1796771 1797853 . + 0 ID=cds-WP_003898943.1;Parent=gene-AL55_RS13835;Dbxref=GenBank:WP_003898943.1;Name=WP_003898943.1;Ontology_term=GO:0006812,GO:0006816,GO:0008324,GO:0015369,GO:0016020;gbkey=CDS;gene=chaA;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,calcium:proton antiporter activity|0015369||IEA;go_process=monoatomic cation transport|0006812||IEA,calcium ion transport|0006816||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216123.1;locus_tag=AL55_RS13835;product=calcium:cation antiporter;protein_id=WP_003898943.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1797888 1798352 . - . ID=gene-AL55_RS13840;Name=bcpB;gbkey=Gene;gene=bcpB;gene_biotype=protein_coding;locus_tag=AL55_RS13840;old_locus_tag=AL55_01657 NZ_KK316828.1 Protein Homology CDS 1797888 1798352 . - 0 ID=cds-WP_003407974.1;Parent=gene-AL55_RS13840;Dbxref=GenBank:WP_003407974.1;Name=WP_003407974.1;gbkey=CDS;gene=bcpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216124.1;locus_tag=AL55_RS13840;product=peroxiredoxin BcpB;protein_id=WP_003407974.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1798493 1800043 . + . ID=gene-AL55_RS13845;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=AL55_RS13845;old_locus_tag=AL55_01658 NZ_KK316828.1 Protein Homology CDS 1798493 1800043 . + 0 ID=cds-WP_003407977.1;Parent=gene-AL55_RS13845;Dbxref=GenBank:WP_003407977.1;Name=WP_003407977.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216125.1;locus_tag=AL55_RS13845;product=anthranilate synthase component I;protein_id=WP_003407977.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1800033 1800740 . + . ID=gene-AL55_RS13850;Name=AL55_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13850;old_locus_tag=AL55_01659 NZ_KK316828.1 Protein Homology CDS 1800033 1800740 . + 0 ID=cds-WP_003407980.1;Parent=gene-AL55_RS13850;Dbxref=GenBank:WP_003407980.1;Name=WP_003407980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216126.1;locus_tag=AL55_RS13850;product=TIGR02234 family membrane protein;protein_id=WP_003407980.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1800830 1801648 . + . ID=gene-AL55_RS13855;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=AL55_RS13855;old_locus_tag=AL55_01660 NZ_KK316828.1 Protein Homology CDS 1800830 1801648 . + 0 ID=cds-WP_003407990.1;Parent=gene-AL55_RS13855;Dbxref=GenBank:WP_003407990.1;Name=WP_003407990.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216127.1;locus_tag=AL55_RS13855;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_003407990.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1801684 1802949 . + . ID=gene-AL55_RS13860;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=AL55_RS13860;old_locus_tag=AL55_01661 NZ_KK316828.1 Protein Homology CDS 1801684 1802949 . + 0 ID=cds-WP_016721143.1;Parent=gene-AL55_RS13860;Dbxref=GenBank:WP_016721143.1;Name=WP_016721143.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016721143.1;locus_tag=AL55_RS13860;product=tryptophan synthase subunit beta;protein_id=WP_016721143.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1802949 1803761 . + . ID=gene-AL55_RS13865;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=AL55_RS13865;old_locus_tag=AL55_01662 NZ_KK316828.1 Protein Homology CDS 1802949 1803761 . + 0 ID=cds-WP_003407999.1;Parent=gene-AL55_RS13865;Dbxref=GenBank:WP_003407999.1;Name=WP_003407999.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216129.1;locus_tag=AL55_RS13865;product=tryptophan synthase subunit alpha;protein_id=WP_003407999.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1803761 1805167 . + . ID=gene-AL55_RS13870;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=AL55_RS13870;old_locus_tag=AL55_01663 NZ_KK316828.1 Protein Homology CDS 1803761 1805167 . + 0 ID=cds-WP_003408002.1;Parent=gene-AL55_RS13870;Dbxref=GenBank:WP_003408002.1;Name=WP_003408002.1;gbkey=CDS;gene=lgt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216130.1;locus_tag=AL55_RS13870;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_003408002.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1805843 1806283 . + . ID=gene-AL55_RS13875;Name=AL55_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13875;old_locus_tag=AL55_01664 NZ_KK316828.1 Protein Homology CDS 1805843 1806283 . + 0 ID=cds-WP_003408004.1;Parent=gene-AL55_RS13875;Dbxref=GenBank:WP_003408004.1;Name=WP_003408004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216131.1;locus_tag=AL55_RS13875;product=NINE protein;protein_id=WP_003408004.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1806273 1806671 . + . ID=gene-AL55_RS13880;Name=AL55_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13880;old_locus_tag=AL55_01665 NZ_KK316828.1 Protein Homology CDS 1806273 1806671 . + 0 ID=cds-WP_003408005.1;Parent=gene-AL55_RS13880;Dbxref=GenBank:WP_003408005.1;Name=WP_003408005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216132.1;locus_tag=AL55_RS13880;product=DUF2752 domain-containing protein;protein_id=WP_003408005.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1806779 1808197 . + . ID=gene-AL55_RS13885;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=AL55_RS13885;old_locus_tag=AL55_01666 NZ_KK316828.1 Protein Homology CDS 1806779 1808197 . + 0 ID=cds-WP_003898945.1;Parent=gene-AL55_RS13885;Dbxref=GenBank:WP_003898945.1;Name=WP_003898945.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216133.1;locus_tag=AL55_RS13885;product=pyruvate kinase;protein_id=WP_003898945.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1808205 1809107 . + . ID=gene-AL55_RS13890;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AL55_RS13890;old_locus_tag=AL55_01667 NZ_KK316828.1 Protein Homology CDS 1808205 1809107 . + 0 ID=cds-WP_003408017.1;Parent=gene-AL55_RS13890;Dbxref=GenBank:WP_003408017.1;Name=WP_003408017.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216134.1;locus_tag=AL55_RS13890;product=acyl-CoA thioesterase II;protein_id=WP_003408017.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1809165 1810619 . + . ID=gene-AL55_RS13895;Name=AL55_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13895;old_locus_tag=AL55_01668 NZ_KK316828.1 Protein Homology CDS 1809165 1810619 . + 0 ID=cds-WP_003900378.1;Parent=gene-AL55_RS13895;Dbxref=GenBank:WP_003900378.1;Name=WP_003900378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216135.1;locus_tag=AL55_RS13895;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_003900378.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1810553 1812283 . - . ID=gene-AL55_RS13900;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=AL55_RS13900;old_locus_tag=AL55_01669 NZ_KK316828.1 Protein Homology CDS 1810553 1812283 . - 0 ID=cds-WP_003908715.1;Parent=gene-AL55_RS13900;Dbxref=GenBank:WP_003908715.1;Name=WP_003908715.1;Ontology_term=GO:0033228,GO:0045454,GO:0005524,GO:0033230,GO:0050456,GO:0016020,GO:0055051;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA,L-cystine reductase (NADH) activity|0050456||IEA;go_process=cysteine export across plasma membrane|0033228||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216136.1;locus_tag=AL55_RS13900;product=thiol reductant ABC exporter subunit CydC;protein_id=WP_003908715.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1812280 1813887 . - . ID=gene-AL55_RS13905;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=AL55_RS13905;old_locus_tag=AL55_01670 NZ_KK316828.1 Protein Homology CDS 1812280 1813887 . - 0 ID=cds-WP_071854213.1;Parent=gene-AL55_RS13905;Dbxref=GenBank:WP_071854213.1;Name=WP_071854213.1;Ontology_term=GO:0033228,GO:0045454,GO:0005524,GO:0033230,GO:0050456,GO:0016020,GO:0055051;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA,L-cystine reductase (NADH) activity|0050456||IEA;go_process=cysteine export across plasma membrane|0033228||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020725080.1;locus_tag=AL55_RS13905;product=thiol reductant ABC exporter subunit CydD;protein_id=WP_071854213.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1813950 1814990 . - . ID=gene-AL55_RS13910;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=AL55_RS13910;old_locus_tag=AL55_01671 NZ_KK316828.1 Protein Homology CDS 1813950 1814990 . - 0 ID=cds-WP_003408024.1;Parent=gene-AL55_RS13910;Dbxref=GenBank:WP_003408024.1;Name=WP_003408024.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216138.1;locus_tag=AL55_RS13910;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_003408024.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1815020 1816477 . - . ID=gene-AL55_RS13915;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=AL55_RS13915;old_locus_tag=AL55_01672 NZ_KK316828.1 Protein Homology CDS 1815020 1816477 . - 0 ID=cds-WP_003408027.1;Parent=gene-AL55_RS13915;Dbxref=GenBank:WP_003408027.1;Name=WP_003408027.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;gene=cydA;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177824.1;locus_tag=AL55_RS13915;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_003408027.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1816588 1817175 . - . ID=gene-AL55_RS13920;Name=AL55_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13920;old_locus_tag=AL55_01673 NZ_KK316828.1 Protein Homology CDS 1816588 1817175 . - 0 ID=cds-WP_003898948.1;Parent=gene-AL55_RS13920;Dbxref=GenBank:WP_003898948.1;Name=WP_003898948.1;Ontology_term=GO:0009268;gbkey=CDS;go_process=response to pH|0009268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216140.1;locus_tag=AL55_RS13920;product=HdeD family acid-resistance protein;protein_id=WP_003898948.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1817204 1818535 . - . ID=gene-AL55_RS13925;Name=cya;gbkey=Gene;gene=cya;gene_biotype=protein_coding;locus_tag=AL55_RS13925;old_locus_tag=AL55_01674 NZ_KK316828.1 Protein Homology CDS 1817204 1818535 . - 0 ID=cds-WP_003408035.1;Parent=gene-AL55_RS13925;Dbxref=GenBank:WP_003408035.1;Name=WP_003408035.1;gbkey=CDS;gene=cya;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216141.2;locus_tag=AL55_RS13925;product=adenylate cyclase;protein_id=WP_003408035.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1818602 1818678 . - . ID=gene-AL55_RS13930;Name=AL55_RS13930;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS13930;old_locus_tag=AL55_01675 NZ_KK316828.1 tRNAscan-SE tRNA 1818602 1818678 . - . ID=rna-AL55_RS13930;Parent=gene-AL55_RS13930;anticodon=(pos:complement(1818642..1818644));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS13930;product=tRNA-Leu NZ_KK316828.1 tRNAscan-SE exon 1818602 1818678 . - . ID=exon-AL55_RS13930-1;Parent=rna-AL55_RS13930;anticodon=(pos:complement(1818642..1818644));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS13930;product=tRNA-Leu NZ_KK316828.1 RefSeq gene 1818770 1819387 . + . ID=gene-AL55_RS13935;Name=AL55_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13935;old_locus_tag=AL55_01676 NZ_KK316828.1 Protein Homology CDS 1818770 1819387 . + 0 ID=cds-WP_003408045.1;Parent=gene-AL55_RS13935;Dbxref=GenBank:WP_003408045.1;Name=WP_003408045.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216142.1;locus_tag=AL55_RS13935;product=ANTAR domain-containing response regulator;protein_id=WP_003408045.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1819455 1820663 . - . ID=gene-AL55_RS13940;Name=AL55_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13940;old_locus_tag=AL55_01677 NZ_KK316828.1 Protein Homology CDS 1819455 1820663 . - 0 ID=cds-WP_003408054.1;Parent=gene-AL55_RS13940;Dbxref=GenBank:WP_003408054.1;Name=WP_003408054.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216143.1;locus_tag=AL55_RS13940;product=lipid-transfer protein;protein_id=WP_003408054.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1820660 1821151 . - . ID=gene-AL55_RS13945;Name=AL55_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13945;old_locus_tag=AL55_01678 NZ_KK316828.1 Protein Homology CDS 1820660 1821151 . - 0 ID=cds-WP_003408058.1;Parent=gene-AL55_RS13945;Dbxref=GenBank:WP_003408058.1;Name=WP_003408058.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216144.1;locus_tag=AL55_RS13945;product=Zn-ribbon domain-containing OB-fold protein;protein_id=WP_003408058.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1821255 1823969 . + . ID=gene-AL55_RS13950;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AL55_RS13950;old_locus_tag=AL55_01679 NZ_KK316828.1 Protein Homology CDS 1821255 1823969 . + 0 ID=cds-WP_003901211.1;Parent=gene-AL55_RS13950;Dbxref=GenBank:WP_003901211.1;Name=WP_003901211.1;Ontology_term=GO:0006260,GO:0003887;gbkey=CDS;gene=polA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216145.1;locus_tag=AL55_RS13950;product=DNA polymerase I;protein_id=WP_003901211.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1824132 1825577 . + . ID=gene-AL55_RS13955;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AL55_RS13955;old_locus_tag=AL55_01680 NZ_KK316828.1 Protein Homology CDS 1824132 1825577 . + 0 ID=cds-WP_003408066.1;Parent=gene-AL55_RS13955;Dbxref=GenBank:WP_003408066.1;Name=WP_003408066.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216146.1;locus_tag=AL55_RS13955;product=30S ribosomal protein S1;protein_id=WP_003408066.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1825603 1826826 . + . ID=gene-AL55_RS13960;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AL55_RS13960;old_locus_tag=AL55_01681 NZ_KK316828.1 Protein Homology CDS 1825603 1826826 . + 0 ID=cds-WP_003408069.1;Parent=gene-AL55_RS13960;Dbxref=GenBank:WP_003408069.1;Name=WP_003408069.1;Ontology_term=GO:0015937,GO:0004140,GO:0005524;gbkey=CDS;gene=coaE;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216147.1;locus_tag=AL55_RS13960;product=dephospho-CoA kinase;protein_id=WP_003408069.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1826865 1826981 . + . ID=gene-AL55_RS28200;Name=AL55_RS28200;end_range=1826981,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28200;partial=true;pseudo=true;start_range=.,1826865 NZ_KK316828.1 Protein Homology CDS 1826865 1826981 . + 0 ID=cds-AL55_RS28200;Parent=gene-AL55_RS28200;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1826981,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216242.1;locus_tag=AL55_RS28200;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1826865;transl_table=11 NZ_KK316828.1 RefSeq gene 1826977 1827420 . - . ID=gene-AL55_RS13965;Name=AL55_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13965;old_locus_tag=AL55_01682 NZ_KK316828.1 Protein Homology CDS 1826977 1827420 . - 0 ID=cds-WP_003898953.1;Parent=gene-AL55_RS13965;Dbxref=GenBank:WP_003898953.1;Name=WP_003898953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216148.1;locus_tag=AL55_RS13965;product=ribonuclease FAU-1 family protein;protein_id=WP_003898953.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1827602 1829761 . + . ID=gene-AL55_RS13970;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AL55_RS13970;old_locus_tag=AL55_01683 NZ_KK316828.1 Protein Homology CDS 1827602 1829761 . + 0 ID=cds-WP_003911575.1;Parent=gene-AL55_RS13970;Dbxref=GenBank:WP_003911575.1;Name=WP_003911575.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019731486.1;locus_tag=AL55_RS13970;product=excinuclease ABC subunit UvrB;protein_id=WP_003911575.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1829758 1831173 . + . ID=gene-AL55_RS13975;Name=AL55_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13975;old_locus_tag=AL55_01684 NZ_KK316828.1 Protein Homology CDS 1829758 1831173 . + 0 ID=cds-WP_003408079.1;Parent=gene-AL55_RS13975;Dbxref=GenBank:WP_003408079.1;Name=WP_003408079.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216150.1;locus_tag=AL55_RS13975;product=MFS transporter;protein_id=WP_003408079.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1831162 1832832 . - . ID=gene-AL55_RS13980;Name=AL55_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13980;old_locus_tag=AL55_01685 NZ_KK316828.1 Protein Homology CDS 1831162 1832832 . - 0 ID=cds-WP_003408080.1;Parent=gene-AL55_RS13980;Dbxref=GenBank:WP_003408080.1;Name=WP_003408080.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216151.1;locus_tag=AL55_RS13980;product=mannosyltransferase;protein_id=WP_003408080.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1833041 1833481 . + . ID=gene-AL55_RS13985;Name=AL55_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13985;old_locus_tag=AL55_01686 NZ_KK316828.1 Protein Homology CDS 1833041 1833481 . + 0 ID=cds-WP_003408085.1;Parent=gene-AL55_RS13985;Dbxref=GenBank:WP_003408085.1;Name=WP_003408085.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216152.1;locus_tag=AL55_RS13985;product=universal stress protein;protein_id=WP_003408085.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1833488 1834165 . - . ID=gene-AL55_RS13990;Name=AL55_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS13990;old_locus_tag=AL55_01687 NZ_KK316828.1 Protein Homology CDS 1833488 1834165 . - 0 ID=cds-WP_003408088.1;Parent=gene-AL55_RS13990;Dbxref=GenBank:WP_003408088.1;Name=WP_003408088.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003408088.1;locus_tag=AL55_RS13990;product=MBL fold metallo-hydrolase;protein_id=WP_003408088.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1834331 1837249 . + . ID=gene-AL55_RS13995;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AL55_RS13995;old_locus_tag=AL55_01688 NZ_KK316828.1 Protein Homology CDS 1834331 1837249 . + 0 ID=cds-WP_003408092.1;Parent=gene-AL55_RS13995;Dbxref=GenBank:WP_003408092.1;Name=WP_003408092.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216154.1;locus_tag=AL55_RS13995;product=excinuclease ABC subunit UvrA;protein_id=WP_003408092.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1837306 1837563 . - . ID=gene-AL55_RS14000;Name=AL55_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14000;old_locus_tag=AL55_01689 NZ_KK316828.1 Protein Homology CDS 1837306 1837563 . - 0 ID=cds-WP_003408096.1;Parent=gene-AL55_RS14000;Dbxref=GenBank:WP_003408096.1;Name=WP_003408096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177650.1;locus_tag=AL55_RS14000;product=PspA/IM30 family protein;protein_id=WP_003408096.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1837579 1839048 . - . ID=gene-AL55_RS14005;Name=AL55_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14005;old_locus_tag=AL55_01690 NZ_KK316828.1 Protein Homology CDS 1837579 1839048 . - 0 ID=cds-WP_003408099.1;Parent=gene-AL55_RS14005;Dbxref=GenBank:WP_003408099.1;Name=WP_003408099.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216155.1;locus_tag=AL55_RS14005;product=alpha/beta hydrolase;protein_id=WP_003408099.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1839107 1842442 . - . ID=gene-AL55_RS14010;Name=lysX;gbkey=Gene;gene=lysX;gene_biotype=protein_coding;locus_tag=AL55_RS14010;old_locus_tag=AL55_01691 NZ_KK316828.1 Protein Homology CDS 1839107 1842442 . - 0 ID=cds-WP_009940556.1;Parent=gene-AL55_RS14010;Dbxref=GenBank:WP_009940556.1;Name=WP_009940556.1;Ontology_term=GO:0006430,GO:0000166,GO:0003676,GO:0004824,GO:0005524;gbkey=CDS;gene=lysX;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011560376.1;locus_tag=AL55_RS14010;product=bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX;protein_id=WP_009940556.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1842863 1843468 . + . ID=gene-AL55_RS14015;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AL55_RS14015;old_locus_tag=AL55_01692 NZ_KK316828.1 Protein Homology CDS 1842863 1843468 . + 0 ID=cds-WP_003901217.1;Parent=gene-AL55_RS14015;Dbxref=GenBank:WP_003901217.1;Name=WP_003901217.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216157.1;locus_tag=AL55_RS14015;product=translation initiation factor IF-3;protein_id=WP_003901217.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1843518 1843712 . + . ID=gene-AL55_RS14020;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AL55_RS14020;old_locus_tag=AL55_01693 NZ_KK316828.1 Protein Homology CDS 1843518 1843712 . + 0 ID=cds-WP_003408106.1;Parent=gene-AL55_RS14020;Dbxref=GenBank:WP_003408106.1;Name=WP_003408106.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003876267.1;locus_tag=AL55_RS14020;product=50S ribosomal protein L35;protein_id=WP_003408106.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1843774 1844163 . + . ID=gene-AL55_RS14025;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AL55_RS14025;old_locus_tag=AL55_01694 NZ_KK316828.1 Protein Homology CDS 1843774 1844163 . + 0 ID=cds-WP_003408108.1;Parent=gene-AL55_RS14025;Dbxref=GenBank:WP_003408108.1;Name=WP_003408108.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216159.1;locus_tag=AL55_RS14025;product=50S ribosomal protein L20;protein_id=WP_003408108.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1844196 1844978 . + . ID=gene-AL55_RS14030;Name=tsnR;gbkey=Gene;gene=tsnR;gene_biotype=protein_coding;locus_tag=AL55_RS14030;old_locus_tag=AL55_01695 NZ_KK316828.1 Protein Homology CDS 1844196 1844978 . + 0 ID=cds-WP_003408112.1;Parent=gene-AL55_RS14030;Dbxref=GenBank:WP_003408112.1;Name=WP_003408112.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;gene=tsnR;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216160.1;locus_tag=AL55_RS14030;product=TrmH family RNA methyltransferase;protein_id=WP_003408112.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1844989 1846044 . - . ID=gene-AL55_RS14035;Name=AL55_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14035;old_locus_tag=AL55_01696 NZ_KK316828.1 Protein Homology CDS 1844989 1846044 . - 0 ID=cds-WP_003408141.1;Parent=gene-AL55_RS14035;Dbxref=GenBank:WP_003408141.1;Name=WP_003408141.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216161.1;locus_tag=AL55_RS14035;product=oxygenase MpaB family protein;protein_id=WP_003408141.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1846354 1847286 . + . ID=gene-AL55_RS14040;Name=AL55_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14040;old_locus_tag=AL55_01697 NZ_KK316828.1 Protein Homology CDS 1846354 1847286 . + 0 ID=cds-WP_003900384.1;Parent=gene-AL55_RS14040;Dbxref=GenBank:WP_003900384.1;Name=WP_003900384.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177825.1;locus_tag=AL55_RS14040;product=PE family protein;protein_id=WP_003900384.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1847400 1848314 . + . ID=gene-AL55_RS14045;Name=AL55_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14045;old_locus_tag=AL55_01698 NZ_KK316828.1 Protein Homology CDS 1847400 1848314 . + 0 ID=cds-WP_003913695.1;Parent=gene-AL55_RS14045;Dbxref=GenBank:WP_003913695.1;Name=WP_003913695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913695.1;locus_tag=AL55_RS14045;product=adenylate cyclase;protein_id=WP_003913695.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1848321 1849127 . + . ID=gene-AL55_RS14050;Name=AL55_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14050;old_locus_tag=AL55_01699 NZ_KK316828.1 Protein Homology CDS 1848321 1849127 . + 0 ID=cds-WP_003408145.1;Parent=gene-AL55_RS14050;Dbxref=GenBank:WP_003408145.1;Name=WP_003408145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216164.1;locus_tag=AL55_RS14050;product=rhomboid-like protein;protein_id=WP_003408145.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1849323 1850348 . + . ID=gene-AL55_RS14055;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AL55_RS14055;old_locus_tag=AL55_01700 NZ_KK316828.1 Protein Homology CDS 1849323 1850348 . + 0 ID=cds-WP_003901219.1;Parent=gene-AL55_RS14055;Dbxref=GenBank:WP_003901219.1;Name=WP_003901219.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003920416.1;locus_tag=AL55_RS14055;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_003901219.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1850348 1852843 . + . ID=gene-AL55_RS14060;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AL55_RS14060;old_locus_tag=AL55_01701 NZ_KK316828.1 Protein Homology CDS 1850348 1852843 . + 0 ID=cds-WP_003901220.1;Parent=gene-AL55_RS14060;Dbxref=GenBank:WP_003901220.1;Name=WP_003901220.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216166.1;locus_tag=AL55_RS14060;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_003901220.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1852937 1855993 . - . ID=gene-AL55_RS14065;Name=AL55_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14065;old_locus_tag=AL55_01702 NZ_KK316828.1 Protein Homology CDS 1852937 1855993 . - 0 ID=cds-WP_014584767.1;Parent=gene-AL55_RS14065;Dbxref=GenBank:WP_014584767.1;Name=WP_014584767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177826.1;locus_tag=AL55_RS14065;product=PE domain-containing protein;protein_id=WP_014584767.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1856187 1857245 . + . ID=gene-AL55_RS14070;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=AL55_RS14070;old_locus_tag=AL55_01703 NZ_KK316828.1 Protein Homology CDS 1856187 1857245 . + 0 ID=cds-WP_003898960.1;Parent=gene-AL55_RS14070;Dbxref=GenBank:WP_003898960.1;Name=WP_003898960.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216168.1;locus_tag=AL55_RS14070;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_003898960.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1857242 1858456 . + . ID=gene-AL55_RS14075;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=AL55_RS14075;old_locus_tag=AL55_01704 NZ_KK316828.1 Protein Homology CDS 1857242 1858456 . + 0 ID=cds-WP_003408160.1;Parent=gene-AL55_RS14075;Dbxref=GenBank:WP_003408160.1;Name=WP_003408160.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=L-glutamate N-acetyltransferase activity%2C acting on acetyl-L-ornithine as donor|0004358||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216169.1;locus_tag=AL55_RS14075;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_003408160.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1858453 1859337 . + . ID=gene-AL55_RS14080;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=AL55_RS14080;old_locus_tag=AL55_01705 NZ_KK316828.1 Protein Homology CDS 1858453 1859337 . + 0 ID=cds-WP_003408161.1;Parent=gene-AL55_RS14080;Dbxref=GenBank:WP_003408161.1;Name=WP_003408161.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216170.1;locus_tag=AL55_RS14080;product=acetylglutamate kinase;protein_id=WP_003408161.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1859334 1860536 . + . ID=gene-AL55_RS14085;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=AL55_RS14085;old_locus_tag=AL55_01706 NZ_KK316828.1 Protein Homology CDS 1859334 1860536 . + 0 ID=cds-WP_003408163.1;Parent=gene-AL55_RS14085;Dbxref=GenBank:WP_003408163.1;Name=WP_003408163.1;Ontology_term=GO:0006525,GO:0008483,GO:0030170;gbkey=CDS;gene=argD;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216171.1;locus_tag=AL55_RS14085;product=acetylornithine transaminase;protein_id=WP_003408163.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1860533 1861456 . + . ID=gene-AL55_RS14090;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=AL55_RS14090;old_locus_tag=AL55_01707 NZ_KK316828.1 Protein Homology CDS 1860533 1861456 . + 0 ID=cds-WP_003408165.1;Parent=gene-AL55_RS14090;Dbxref=GenBank:WP_003408165.1;Name=WP_003408165.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216172.1;locus_tag=AL55_RS14090;product=ornithine carbamoyltransferase;protein_id=WP_003408165.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1861453 1861965 . + . ID=gene-AL55_RS14095;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=AL55_RS14095;old_locus_tag=AL55_01708 NZ_KK316828.1 Protein Homology CDS 1861453 1861965 . + 0 ID=cds-WP_003408178.1;Parent=gene-AL55_RS14095;Dbxref=GenBank:WP_003408178.1;Name=WP_003408178.1;Ontology_term=GO:0006355,GO:0006525,GO:0003700;gbkey=CDS;gene=argR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216173.1;locus_tag=AL55_RS14095;product=arginine repressor;protein_id=WP_003408178.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1861974 1863170 . + . ID=gene-AL55_RS14100;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=AL55_RS14100;old_locus_tag=AL55_01709 NZ_KK316828.1 Protein Homology CDS 1861974 1863170 . + 0 ID=cds-WP_003408179.1;Parent=gene-AL55_RS14100;Dbxref=GenBank:WP_003408179.1;Name=WP_003408179.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216174.1;locus_tag=AL55_RS14100;product=argininosuccinate synthase;protein_id=WP_003408179.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1863250 1864662 . + . ID=gene-AL55_RS14105;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=AL55_RS14105;old_locus_tag=AL55_01710 NZ_KK316828.1 Protein Homology CDS 1863250 1864662 . + 0 ID=cds-WP_003408180.1;Parent=gene-AL55_RS14105;Dbxref=GenBank:WP_003408180.1;Name=WP_003408180.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216175.1;locus_tag=AL55_RS14105;product=argininosuccinate lyase;protein_id=WP_003408180.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1864771 1865832 . + . ID=gene-AL55_RS14110;Name=AL55_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14110;old_locus_tag=AL55_01711 NZ_KK316828.1 Protein Homology CDS 1864771 1865832 . + 0 ID=cds-WP_003408181.1;Parent=gene-AL55_RS14110;Dbxref=GenBank:WP_003408181.1;Name=WP_003408181.1;Ontology_term=GO:0030639,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216176.1;locus_tag=AL55_RS14110;product=type III polyketide synthase;protein_id=WP_003408181.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1865915 1872295 . + . ID=gene-AL55_RS14115;Name=AL55_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14115;old_locus_tag=AL55_01712 NZ_KK316828.1 Protein Homology CDS 1865915 1872295 . + 0 ID=cds-WP_003902218.1;Parent=gene-AL55_RS14115;Dbxref=GenBank:WP_003902218.1;Name=WP_003902218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216177.1;locus_tag=AL55_RS14115;product=type I polyketide synthase;protein_id=WP_003902218.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1872315 1877123 . + . ID=gene-AL55_RS14120;Name=AL55_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14120;old_locus_tag=AL55_01713 NZ_KK316828.1 Protein Homology CDS 1872315 1877123 . + 0 ID=cds-WP_003902217.1;Parent=gene-AL55_RS14120;Dbxref=GenBank:WP_003902217.1;Name=WP_003902217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216178.1;locus_tag=AL55_RS14120;product=type I polyketide synthase;protein_id=WP_003902217.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1877099 1878631 . + . ID=gene-AL55_RS27685;Name=AL55_RS27685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27685;old_locus_tag=AL55_01714 NZ_KK316828.1 Protein Homology CDS 1877099 1878631 . + 0 ID=cds-WP_003901230.1;Parent=gene-AL55_RS27685;Dbxref=GenBank:WP_003901230.1;Name=WP_003901230.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020243.6;locus_tag=AL55_RS27685;product=type I polyketide synthase;protein_id=WP_003901230.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1878637 1881690 . + . ID=gene-AL55_RS14130;Name=AL55_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14130;old_locus_tag=AL55_01715 NZ_KK316828.1 Protein Homology CDS 1878637 1881690 . + 0 ID=cds-WP_003900389.1;Parent=gene-AL55_RS14130;Dbxref=GenBank:WP_003900389.1;Name=WP_003900389.1;Ontology_term=GO:0006633,GO:0030639,GO:0034081;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216180.1;locus_tag=AL55_RS14130;product=type I polyketide synthase;protein_id=WP_003900389.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1881837 1882898 . + . ID=gene-AL55_RS14135;Name=AL55_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14135;old_locus_tag=AL55_01716 NZ_KK316828.1 Protein Homology CDS 1881837 1882898 . + 0 ID=cds-WP_003408248.1;Parent=gene-AL55_RS14135;Dbxref=GenBank:WP_003408248.1;Name=WP_003408248.1;Ontology_term=GO:0030639,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216181.1;locus_tag=AL55_RS14135;product=type III polyketide synthase;protein_id=WP_003408248.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1882881 1884173 . - . ID=gene-AL55_RS14140;Name=AL55_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14140;old_locus_tag=AL55_01717 NZ_KK316828.1 Protein Homology CDS 1882881 1884173 . - 0 ID=cds-WP_003901231.1;Parent=gene-AL55_RS14140;Dbxref=GenBank:WP_003901231.1;Name=WP_003901231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216182.1;locus_tag=AL55_RS14140;product=cytochrome P450;protein_id=WP_003901231.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1884188 1885963 . - . ID=gene-AL55_RS0104750;Name=AL55_RS0104750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104750 NZ_KK316828.1 Protein Homology CDS 1884188 1885963 . - 0 ID=cds-WP_003408257.1;Parent=gene-AL55_RS0104750;Dbxref=GenBank:WP_003408257.1;Name=WP_003408257.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303143.1;locus_tag=AL55_RS0104750;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_003408257.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1886346 1886708 . + . ID=gene-AL55_RS14145;Name=AL55_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14145;old_locus_tag=AL55_01720 NZ_KK316828.1 Protein Homology CDS 1886346 1886708 . + 0 ID=cds-WP_003901232.1;Parent=gene-AL55_RS14145;Dbxref=GenBank:WP_003901232.1;Name=WP_003901232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216185.1;locus_tag=AL55_RS14145;product=hypothetical protein;protein_id=WP_003901232.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1886741 1887088 . + . ID=gene-AL55_RS14150;Name=AL55_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14150;old_locus_tag=AL55_01721 NZ_KK316828.1 Protein Homology CDS 1886741 1887088 . + 0 ID=cds-WP_003408261.1;Parent=gene-AL55_RS14150;Dbxref=GenBank:WP_003408261.1;Name=WP_003408261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216186.1;locus_tag=AL55_RS14150;product=DUF427 domain-containing protein;protein_id=WP_003408261.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1887096 1887488 . + . ID=gene-AL55_RS14155;Name=AL55_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14155;old_locus_tag=AL55_01722 NZ_KK316828.1 Protein Homology CDS 1887096 1887488 . + 0 ID=cds-WP_003408263.1;Parent=gene-AL55_RS14155;Dbxref=GenBank:WP_003408263.1;Name=WP_003408263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216187.1;locus_tag=AL55_RS14155;product=hypothetical protein;protein_id=WP_003408263.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1887497 1888828 . - . ID=gene-AL55_RS14160;Name=AL55_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14160;old_locus_tag=AL55_01723 NZ_KK316828.1 Protein Homology CDS 1887497 1888828 . - 0 ID=cds-WP_003408264.1;Parent=gene-AL55_RS14160;Dbxref=GenBank:WP_003408264.1;Name=WP_003408264.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216188.1;locus_tag=AL55_RS14160;product=MFS transporter;protein_id=WP_003408264.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1888921 1889853 . - . ID=gene-AL55_RS14165;Name=AL55_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14165;old_locus_tag=AL55_01724 NZ_KK316828.1 Protein Homology CDS 1888921 1889853 . - 0 ID=cds-WP_003408265.1;Parent=gene-AL55_RS14165;Dbxref=GenBank:WP_003408265.1;Name=WP_003408265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216189.1;locus_tag=AL55_RS14165;product=transglutaminase-like domain-containing protein;protein_id=WP_003408265.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1889881 1890537 . - . ID=gene-AL55_RS14170;Name=AL55_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14170;old_locus_tag=AL55_01725 NZ_KK316828.1 Protein Homology CDS 1889881 1890537 . - 0 ID=cds-WP_003408266.1;Parent=gene-AL55_RS14170;Dbxref=GenBank:WP_003408266.1;Name=WP_003408266.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216190.1;locus_tag=AL55_RS14170;product=ArsR/SmtB family transcription factor;protein_id=WP_003408266.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1890722 1890868 . + . ID=gene-AL55_RS27280;Name=AL55_RS27280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27280 NZ_KK316828.1 Protein Homology CDS 1890722 1890868 . + 0 ID=cds-WP_003408267.1;Parent=gene-AL55_RS27280;Dbxref=GenBank:WP_003408267.1;Name=WP_003408267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303146.1;locus_tag=AL55_RS27280;product=hypothetical protein;protein_id=WP_003408267.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1890862 1891596 . - . ID=gene-AL55_RS14175;Name=cmr;gbkey=Gene;gene=cmr;gene_biotype=protein_coding;locus_tag=AL55_RS14175;old_locus_tag=AL55_01726 NZ_KK316828.1 Protein Homology CDS 1890862 1891596 . - 0 ID=cds-WP_003898967.1;Parent=gene-AL55_RS14175;Dbxref=GenBank:WP_003898967.1;Name=WP_003898967.1;gbkey=CDS;gene=cmr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216191.1;locus_tag=AL55_RS14175;product=HTH-type transcriptional regulator Cmr;protein_id=WP_003898967.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1891668 1892372 . + . ID=gene-AL55_RS0104760;Name=AL55_RS0104760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104760;old_locus_tag=AL55_01727 NZ_KK316828.1 Protein Homology CDS 1891668 1892372 . + 0 ID=cds-WP_003408270.1;Parent=gene-AL55_RS0104760;Dbxref=GenBank:WP_003408270.1;Name=WP_003408270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216192.1;locus_tag=AL55_RS0104760;product=peroxiredoxin-like family protein;protein_id=WP_003408270.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1892369 1892917 . + . ID=gene-AL55_RS14180;Name=dsbF;gbkey=Gene;gene=dsbF;gene_biotype=protein_coding;locus_tag=AL55_RS14180;old_locus_tag=AL55_01728 NZ_KK316828.1 Protein Homology CDS 1892369 1892917 . + 0 ID=cds-WP_003408271.1;Parent=gene-AL55_RS14180;Dbxref=GenBank:WP_003408271.1;Name=WP_003408271.1;gbkey=CDS;gene=dsbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216193.1;locus_tag=AL55_RS14180;product=disulfide bond-forming protein DsbF;protein_id=WP_003408271.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1893018 1893920 . + . ID=gene-AL55_RS14185;Name=AL55_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14185;old_locus_tag=AL55_01729 NZ_KK316828.1 Protein Homology CDS 1893018 1893920 . + 0 ID=cds-WP_003408272.1;Parent=gene-AL55_RS14185;Dbxref=GenBank:WP_003408272.1;Name=WP_003408272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216194.1;locus_tag=AL55_RS14185;product=Rv1678 family membrane protein;protein_id=WP_003408272.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1893920 1895041 . + . ID=gene-AL55_RS14190;Name=fadE16;gbkey=Gene;gene=fadE16;gene_biotype=protein_coding;locus_tag=AL55_RS14190;old_locus_tag=AL55_01730 NZ_KK316828.1 Protein Homology CDS 1893920 1895041 . + 0 ID=cds-WP_003408274.1;Parent=gene-AL55_RS14190;Dbxref=GenBank:WP_003408274.1;Name=WP_003408274.1;gbkey=CDS;gene=fadE16;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216195.1;locus_tag=AL55_RS14190;product=Rv1679 family acyl-CoA dehydrogenase;protein_id=WP_003408274.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1895050 1895874 . + . ID=gene-AL55_RS14195;Name=AL55_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14195;old_locus_tag=AL55_01731 NZ_KK316828.1 Protein Homology CDS 1895050 1895874 . + 0 ID=cds-WP_003898971.1;Parent=gene-AL55_RS14195;Dbxref=GenBank:WP_003898971.1;Name=WP_003898971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216196.1;locus_tag=AL55_RS14195;product=Rv1680 family SBP-like protein;protein_id=WP_003898971.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1895871 1896863 . + . ID=gene-AL55_RS14200;Name=moeX;gbkey=Gene;gene=moeX;gene_biotype=protein_coding;locus_tag=AL55_RS14200;old_locus_tag=AL55_01732 NZ_KK316828.1 Protein Homology CDS 1895871 1896863 . + 0 ID=cds-WP_003905632.1;Parent=gene-AL55_RS14200;Dbxref=GenBank:WP_003905632.1;Name=WP_003905632.1;gbkey=CDS;gene=moeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216197.1;locus_tag=AL55_RS14200;product=Rv1681 family radical SAM protein;protein_id=WP_003905632.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1897093 1897941 . + . ID=gene-AL55_RS14205;Name=AL55_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14205;old_locus_tag=AL55_01733 NZ_KK316828.1 Protein Homology CDS 1897093 1897941 . + 0 ID=cds-WP_003898973.1;Parent=gene-AL55_RS14205;Dbxref=GenBank:WP_003898973.1;Name=WP_003898973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898973.1;locus_tag=AL55_RS14205;product=coiled-coil domain-containing protein;protein_id=WP_003898973.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1898215 1901214 . + . ID=gene-AL55_RS14210;Name=AL55_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14210;old_locus_tag=AL55_01734 NZ_KK316828.1 Protein Homology CDS 1898215 1901214 . + 0 ID=cds-WP_003408360.1;Parent=gene-AL55_RS14210;Dbxref=GenBank:WP_003408360.1;Name=WP_003408360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216199.1;locus_tag=AL55_RS14210;product=acyl-CoA synthetase;protein_id=WP_003408360.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1901207 1901431 . + . ID=gene-AL55_RS14215;Name=AL55_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14215;old_locus_tag=AL55_01735 NZ_KK316828.1 Protein Homology CDS 1901207 1901431 . + 0 ID=cds-WP_003408362.1;Parent=gene-AL55_RS14215;Dbxref=GenBank:WP_003408362.1;Name=WP_003408362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216200.1;locus_tag=AL55_RS14215;product=Trm112 family protein;protein_id=WP_003408362.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1901397 1902020 . - . ID=gene-AL55_RS14220;Name=AL55_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14220;old_locus_tag=AL55_01736 NZ_KK316828.1 Protein Homology CDS 1901397 1902020 . - 0 ID=cds-WP_003408366.1;Parent=gene-AL55_RS14220;Dbxref=GenBank:WP_003408366.1;Name=WP_003408366.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216201.1;locus_tag=AL55_RS14220;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003408366.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1902022 1902771 . - . ID=gene-AL55_RS14225;Name=AL55_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14225;old_locus_tag=AL55_01737 NZ_KK316828.1 Protein Homology CDS 1902022 1902771 . - 0 ID=cds-WP_003912666.1;Parent=gene-AL55_RS14225;Dbxref=GenBank:WP_003912666.1;Name=WP_003912666.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912666.1;locus_tag=AL55_RS14225;product=ABC transporter permease;protein_id=WP_003912666.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1902774 1903541 . - . ID=gene-AL55_RS14230;Name=AL55_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14230;old_locus_tag=AL55_01738 NZ_KK316828.1 Protein Homology CDS 1902774 1903541 . - 0 ID=cds-WP_003898975.1;Parent=gene-AL55_RS14230;Dbxref=GenBank:WP_003898975.1;Name=WP_003898975.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216203.1;locus_tag=AL55_RS14230;product=ABC transporter ATP-binding protein;protein_id=WP_003898975.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1903600 1904211 . + . ID=gene-AL55_RS14235;Name=mpg;gbkey=Gene;gene=mpg;gene_biotype=protein_coding;locus_tag=AL55_RS14235;old_locus_tag=AL55_01739 NZ_KK316828.1 Protein Homology CDS 1903600 1904211 . + 0 ID=cds-WP_003408373.1;Parent=gene-AL55_RS14235;Dbxref=GenBank:WP_003408373.1;Name=WP_003408373.1;Ontology_term=GO:0006284,GO:0003905;gbkey=CDS;gene=mpg;go_function=alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216204.1;locus_tag=AL55_RS14235;product=DNA-3-methyladenine glycosylase;protein_id=WP_003408373.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1904223 1905497 . + . ID=gene-AL55_RS14240;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=AL55_RS14240;old_locus_tag=AL55_01740 NZ_KK316828.1 Protein Homology CDS 1904223 1905497 . + 0 ID=cds-WP_003408375.1;Parent=gene-AL55_RS14240;Dbxref=GenBank:WP_003408375.1;Name=WP_003408375.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216205.1;locus_tag=AL55_RS14240;product=tyrosine--tRNA ligase;protein_id=WP_003408375.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1906148 1906531 . + . ID=gene-AL55_RS14245;Name=lprJ;gbkey=Gene;gene=lprJ;gene_biotype=protein_coding;locus_tag=AL55_RS14245;old_locus_tag=AL55_01741 NZ_KK316828.1 Protein Homology CDS 1906148 1906531 . + 0 ID=cds-WP_003408378.1;Parent=gene-AL55_RS14245;Dbxref=GenBank:WP_003408378.1;Name=WP_003408378.1;gbkey=CDS;gene=lprJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216206.1;locus_tag=AL55_RS14245;product=lipoprotein LprJ;protein_id=WP_003408378.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1906570 1907322 . + . ID=gene-AL55_RS14250;Name=AL55_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14250;old_locus_tag=AL55_01742 NZ_KK316828.1 Protein Homology CDS 1906570 1907322 . + 0 ID=cds-WP_003408379.1;Parent=gene-AL55_RS14250;Dbxref=GenBank:WP_003408379.1;Name=WP_003408379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216207.1;locus_tag=AL55_RS14250;product=tetratricopeptide repeat protein;protein_id=WP_003408379.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1907319 1908380 . + . ID=gene-AL55_RS14255;Name=AL55_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14255;old_locus_tag=AL55_01743 NZ_KK316828.1 Protein Homology CDS 1907319 1908380 . + 0 ID=cds-WP_003408380.1;Parent=gene-AL55_RS14255;Dbxref=GenBank:WP_003408380.1;Name=WP_003408380.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216208.1;locus_tag=AL55_RS14255;product=HAD-IIA family hydrolase;protein_id=WP_003408380.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1908377 1908553 . + . ID=gene-AL55_RS14260;Name=AL55_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14260;old_locus_tag=AL55_01744 NZ_KK316828.1 Protein Homology CDS 1908377 1908553 . + 0 ID=cds-WP_003408381.1;Parent=gene-AL55_RS14260;Dbxref=GenBank:WP_003408381.1;Name=WP_003408381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216209.1;locus_tag=AL55_RS14260;product=hypothetical protein;protein_id=WP_003408381.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1908561 1909367 . + . ID=gene-AL55_RS14265;Name=tlyA;gbkey=Gene;gene=tlyA;gene_biotype=protein_coding;locus_tag=AL55_RS14265;old_locus_tag=AL55_01745 NZ_KK316828.1 Protein Homology CDS 1908561 1909367 . + 0 ID=cds-WP_003408382.1;Parent=gene-AL55_RS14265;Dbxref=GenBank:WP_003408382.1;Name=WP_003408382.1;gbkey=CDS;gene=tlyA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216210.1;locus_tag=AL55_RS14265;product=16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA;protein_id=WP_003408382.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1909367 1910290 . + . ID=gene-AL55_RS14270;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=AL55_RS14270;old_locus_tag=AL55_01746 NZ_KK316828.1 Protein Homology CDS 1909367 1910290 . + 0 ID=cds-WP_003408383.1;Parent=gene-AL55_RS14270;Dbxref=GenBank:WP_003408383.1;Name=WP_003408383.1;Ontology_term=GO:0006741,GO:0019674,GO:0003951;gbkey=CDS;gene=ppnK;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA,NAD+ metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216211.1;locus_tag=AL55_RS14270;product=NAD kinase;protein_id=WP_003408383.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1910304 1912067 . + . ID=gene-AL55_RS14275;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=AL55_RS14275;old_locus_tag=AL55_01747 NZ_KK316828.1 Protein Homology CDS 1910304 1912067 . + 0 ID=cds-WP_003408385.1;Parent=gene-AL55_RS14275;Dbxref=GenBank:WP_003408385.1;Name=WP_003408385.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216212.1;locus_tag=AL55_RS14275;product=DNA repair protein RecN;protein_id=WP_003408385.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1912163 1913344 . + . ID=gene-AL55_RS14280;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=AL55_RS14280;old_locus_tag=AL55_01748 NZ_KK316828.1 Protein Homology CDS 1912163 1913344 . + 0 ID=cds-WP_003408387.1;Parent=gene-AL55_RS14280;Dbxref=GenBank:WP_003408387.1;Name=WP_003408387.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216213.1;locus_tag=AL55_RS14280;product=putative cytokinetic ring protein SteA;protein_id=WP_003408387.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1913366 1914310 . + . ID=gene-AL55_RS14285;Name=mctB;gbkey=Gene;gene=mctB;gene_biotype=protein_coding;locus_tag=AL55_RS14285;old_locus_tag=AL55_01749 NZ_KK316828.1 Protein Homology CDS 1913366 1914310 . + 0 ID=cds-WP_003408390.1;Parent=gene-AL55_RS14285;Dbxref=GenBank:WP_003408390.1;Name=WP_003408390.1;gbkey=CDS;gene=mctB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216214.1;locus_tag=AL55_RS14285;product=copper transporter MctB;protein_id=WP_003408390.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1914450 1916210 . + . ID=gene-AL55_RS14290;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AL55_RS14290;old_locus_tag=AL55_01750 NZ_KK316828.1 Protein Homology CDS 1914450 1916210 . + 0 ID=cds-WP_003408396.1;Parent=gene-AL55_RS14290;Dbxref=GenBank:WP_003408396.1;Name=WP_003408396.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216215.1;locus_tag=AL55_RS14290;product=CTP synthase;protein_id=WP_003408396.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1916203 1916826 . + . ID=gene-AL55_RS14295;Name=AL55_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14295;old_locus_tag=AL55_01751 NZ_KK316828.1 Protein Homology CDS 1916203 1916826 . + 0 ID=cds-WP_003408399.1;Parent=gene-AL55_RS14295;Dbxref=GenBank:WP_003408399.1;Name=WP_003408399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216216.1;locus_tag=AL55_RS14295;product=ADP-ribose diphosphatase;protein_id=WP_003408399.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1916823 1917758 . + . ID=gene-AL55_RS14300;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AL55_RS14300;old_locus_tag=AL55_01752 NZ_KK316828.1 Protein Homology CDS 1916823 1917758 . + 0 ID=cds-WP_003408401.1;Parent=gene-AL55_RS14300;Dbxref=GenBank:WP_003408401.1;Name=WP_003408401.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216217.1;locus_tag=AL55_RS14300;product=site-specific tyrosine recombinase XerD;protein_id=WP_003408401.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1917832 1919196 . - . ID=gene-AL55_RS14305;Name=AL55_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14305;old_locus_tag=AL55_01753 NZ_KK316828.1 Protein Homology CDS 1917832 1919196 . - 0 ID=cds-WP_031695406.1;Parent=gene-AL55_RS14305;Dbxref=GenBank:WP_031695406.1;Name=WP_031695406.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216218.1;locus_tag=AL55_RS14305;product=HNH endonuclease signature motif containing protein;protein_id=WP_031695406.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1919458 1919619 . - . ID=gene-AL55_RS27285;Name=AL55_RS27285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27285 NZ_KK316828.1 Protein Homology CDS 1919458 1919619 . - 0 ID=cds-WP_009939761.1;Parent=gene-AL55_RS27285;Dbxref=GenBank:WP_009939761.1;Name=WP_009939761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939761.1;locus_tag=AL55_RS27285;product=hypothetical protein;protein_id=WP_009939761.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1919752 1920501 . - . ID=gene-AL55_RS14310;Name=AL55_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14310;old_locus_tag=AL55_01754 NZ_KK316828.1 Protein Homology CDS 1919752 1920501 . - 0 ID=cds-WP_014848103.1;Parent=gene-AL55_RS14310;Dbxref=GenBank:WP_014848103.1;Name=WP_014848103.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216219.4;locus_tag=AL55_RS14310;product=O-methyltransferase;protein_id=WP_014848103.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1920407 1922077 . - . ID=gene-AL55_RS14315;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;locus_tag=AL55_RS14315;old_locus_tag=AL55_01755 NZ_KK316828.1 Protein Homology CDS 1920407 1922077 . - 0 ID=cds-WP_003408413.1;Parent=gene-AL55_RS14315;Dbxref=GenBank:WP_003408413.1;Name=WP_003408413.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216220.1;locus_tag=AL55_RS14315;product=amino acid permease;protein_id=WP_003408413.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1922118 1923275 . - . ID=gene-AL55_RS14320;Name=AL55_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14320;old_locus_tag=AL55_01756 NZ_KK316828.1 Protein Homology CDS 1922118 1923275 . - 0 ID=cds-WP_003408416.1;Parent=gene-AL55_RS14320;Dbxref=GenBank:WP_003408416.1;Name=WP_003408416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177827.1;locus_tag=AL55_RS14320;product=PPE family protein;protein_id=WP_003408416.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1923315 1924349 . - . ID=gene-AL55_RS14325;Name=AL55_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14325;old_locus_tag=AL55_01757 NZ_KK316828.1 Protein Homology CDS 1923315 1924349 . - 0 ID=cds-WP_003918302.1;Parent=gene-AL55_RS14325;Dbxref=GenBank:WP_003918302.1;Name=WP_003918302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950601.1;locus_tag=AL55_RS14325;product=PPE family protein;protein_id=WP_003918302.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1925103 1925270 . - . ID=gene-AL55_RS14330;Name=AL55_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14330;old_locus_tag=AL55_01758 NZ_KK316828.1 Protein Homology CDS 1925103 1925270 . - 0 ID=cds-WP_003408420.1;Parent=gene-AL55_RS14330;Dbxref=GenBank:WP_003408420.1;Name=WP_003408420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177651.1;locus_tag=AL55_RS14330;product=hypothetical protein;protein_id=WP_003408420.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1925503 1926963 . + . ID=gene-AL55_RS14335;Name=AL55_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14335;old_locus_tag=AL55_01759 NZ_KK316828.1 Protein Homology CDS 1925503 1926963 . + 0 ID=cds-WP_003898981.1;Parent=gene-AL55_RS14335;Dbxref=GenBank:WP_003898981.1;Name=WP_003898981.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216223.1;locus_tag=AL55_RS14335;product=SulP family inorganic anion transporter;protein_id=WP_003898981.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1927074 1927937 . + . ID=gene-AL55_RS14340;Name=AL55_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14340;old_locus_tag=AL55_01760 NZ_KK316828.1 Protein Homology CDS 1927074 1927937 . + 0 ID=cds-WP_003911586.1;Parent=gene-AL55_RS14340;Dbxref=GenBank:WP_003911586.1;Name=WP_003911586.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911586.1;locus_tag=AL55_RS14340;product=ParA family protein;protein_id=WP_003911586.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1927934 1928770 . + . ID=gene-AL55_RS14345;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=AL55_RS14345;old_locus_tag=AL55_01761 NZ_KK316828.1 Protein Homology CDS 1927934 1928770 . + 0 ID=cds-WP_003408432.1;Parent=gene-AL55_RS14345;Dbxref=GenBank:WP_003408432.1;Name=WP_003408432.1;gbkey=CDS;gene=scpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216225.1;locus_tag=AL55_RS14345;product=segregation/condensation protein A;protein_id=WP_003408432.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1928767 1929462 . + . ID=gene-AL55_RS14350;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=AL55_RS14350;old_locus_tag=AL55_01762 NZ_KK316828.1 Protein Homology CDS 1928767 1929462 . + 0 ID=cds-WP_003408436.1;Parent=gene-AL55_RS14350;Dbxref=GenBank:WP_003408436.1;Name=WP_003408436.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216226.1;locus_tag=AL55_RS14350;product=SMC-Scp complex subunit ScpB;protein_id=WP_003408436.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1929459 1930223 . + . ID=gene-AL55_RS14355;Name=AL55_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14355;old_locus_tag=AL55_01763 NZ_KK316828.1 Protein Homology CDS 1929459 1930223 . + 0 ID=cds-WP_003408439.1;Parent=gene-AL55_RS14355;Dbxref=GenBank:WP_003408439.1;Name=WP_003408439.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216227.1;locus_tag=AL55_RS14355;product=pseudouridine synthase;protein_id=WP_003408439.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1930220 1930912 . + . ID=gene-AL55_RS14360;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AL55_RS14360;old_locus_tag=AL55_01764 NZ_KK316828.1 Protein Homology CDS 1930220 1930912 . + 0 ID=cds-WP_003408441.1;Parent=gene-AL55_RS14360;Dbxref=GenBank:WP_003408441.1;Name=WP_003408441.1;Ontology_term=GO:0015949,GO:0005524;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216228.1;locus_tag=AL55_RS14360;product=(d)CMP kinase;protein_id=WP_003408441.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1930909 1932300 . + . ID=gene-AL55_RS14365;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=AL55_RS14365;old_locus_tag=AL55_01765 NZ_KK316828.1 Protein Homology CDS 1930909 1932300 . + 0 ID=cds-WP_003898984.1;Parent=gene-AL55_RS14365;Dbxref=GenBank:WP_003898984.1;Name=WP_003898984.1;Ontology_term=GO:0005525;gbkey=CDS;gene=der;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216229.1;locus_tag=AL55_RS14365;product=ribosome biogenesis GTPase Der;protein_id=WP_003898984.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1932474 1933286 . + . ID=gene-AL55_RS14370;Name=AL55_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14370;old_locus_tag=AL55_01766 NZ_KK316828.1 Protein Homology CDS 1932474 1933286 . + 0 ID=cds-WP_003408444.1;Parent=gene-AL55_RS14370;Dbxref=GenBank:WP_003408444.1;Name=WP_003408444.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216230.1;locus_tag=AL55_RS14370;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003408444.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1933280 1934194 . + . ID=gene-AL55_RS14375;Name=AL55_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14375;old_locus_tag=AL55_01767 NZ_KK316828.1 Protein Homology CDS 1933280 1934194 . + 0 ID=cds-WP_003898985.1;Parent=gene-AL55_RS14375;Dbxref=GenBank:WP_003898985.1;Name=WP_003898985.1;Ontology_term=GO:0006635,GO:0003857,GO:0070403;gbkey=CDS;go_function=3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177829.1;locus_tag=AL55_RS14375;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=WP_003898985.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1934197 1935027 . + . ID=gene-AL55_RS14380;Name=AL55_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14380;old_locus_tag=AL55_01768 NZ_KK316828.1 Protein Homology CDS 1934197 1935027 . + 0 ID=cds-WP_003408448.1;Parent=gene-AL55_RS14380;Dbxref=GenBank:WP_003408448.1;Name=WP_003408448.1;Ontology_term=GO:0016812,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003907750.1;locus_tag=AL55_RS14380;product=cyclase family protein;protein_id=WP_003408448.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1935027 1935377 . + . ID=gene-AL55_RS14385;Name=AL55_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14385;old_locus_tag=AL55_01769 NZ_KK316828.1 Protein Homology CDS 1935027 1935377 . + 0 ID=cds-WP_003898986.1;Parent=gene-AL55_RS14385;Dbxref=GenBank:WP_003898986.1;Name=WP_003898986.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216233.1;locus_tag=AL55_RS14385;product=beta-D-galactosidase;protein_id=WP_003898986.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1935430 1936248 . + . ID=gene-AL55_RS14390;Name=AL55_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14390;old_locus_tag=AL55_01770 NZ_KK316828.1 Protein Homology CDS 1935430 1936248 . + 0 ID=cds-WP_003408456.1;Parent=gene-AL55_RS14390;Dbxref=GenBank:WP_003408456.1;Name=WP_003408456.1;Ontology_term=GO:0019475,GO:0043720,GO:0046872;gbkey=CDS;go_function=3-keto-5-aminohexanoate cleavage activity|0043720||IEA,metal ion binding|0046872||IEA;go_process=L-lysine catabolic process to acetate|0019475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216234.1;locus_tag=AL55_RS14390;product=beta-keto acid cleavage family enzyme;protein_id=WP_003408456.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1936262 1937041 . + . ID=gene-AL55_RS14395;Name=AL55_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14395;old_locus_tag=AL55_01771 NZ_KK316828.1 Protein Homology CDS 1936262 1937041 . + 0 ID=cds-WP_003408460.1;Parent=gene-AL55_RS14395;Dbxref=GenBank:WP_003408460.1;Name=WP_003408460.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216235.1;locus_tag=AL55_RS14395;product=IclR family transcriptional regulator;protein_id=WP_003408460.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1937234 1937307 . + . ID=gene-AL55_RS14400;Name=AL55_RS14400;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS14400;old_locus_tag=AL55_01772 NZ_KK316828.1 tRNAscan-SE tRNA 1937234 1937307 . + . ID=rna-AL55_RS14400;Parent=gene-AL55_RS14400;anticodon=(pos:1937268..1937270);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS14400;product=tRNA-Pro NZ_KK316828.1 tRNAscan-SE exon 1937234 1937307 . + . ID=exon-AL55_RS14400-1;Parent=rna-AL55_RS14400;anticodon=(pos:1937268..1937270);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS14400;product=tRNA-Pro NZ_KK316828.1 RefSeq gene 1937651 1938040 . - . ID=gene-AL55_RS14405;Name=AL55_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14405;old_locus_tag=AL55_01773 NZ_KK316828.1 Protein Homology CDS 1937651 1938040 . - 0 ID=cds-WP_003408465.1;Parent=gene-AL55_RS14405;Dbxref=GenBank:WP_003408465.1;Name=WP_003408465.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216236.1;locus_tag=AL55_RS14405;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003408465.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1938037 1938264 . - . ID=gene-AL55_RS14410;Name=AL55_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14410;old_locus_tag=AL55_01774 NZ_KK316828.1 Protein Homology CDS 1938037 1938264 . - 0 ID=cds-WP_003408469.1;Parent=gene-AL55_RS14410;Dbxref=GenBank:WP_003408469.1;Name=WP_003408469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216237.2;locus_tag=AL55_RS14410;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_003408469.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1938482 1939966 . + . ID=gene-AL55_RS14415;Name=AL55_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14415;old_locus_tag=AL55_01775 NZ_KK316828.1 Protein Homology CDS 1938482 1939966 . + 0 ID=cds-WP_003408473.1;Parent=gene-AL55_RS14415;Dbxref=GenBank:WP_003408473.1;Name=WP_003408473.1;Ontology_term=GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216238.1;locus_tag=AL55_RS14415;product=biotin carboxylase;protein_id=WP_003408473.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1939963 1941210 . + . ID=gene-AL55_RS14420;Name=AL55_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14420;old_locus_tag=AL55_01776 NZ_KK316828.1 Protein Homology CDS 1939963 1941210 . + 0 ID=cds-WP_003408476.1;Parent=gene-AL55_RS14420;Dbxref=GenBank:WP_003408476.1;Name=WP_003408476.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216239.1;locus_tag=AL55_RS14420;product=serine hydrolase domain-containing protein;protein_id=WP_003408476.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1941253 1941672 . - . ID=gene-AL55_RS14425;Name=AL55_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14425;old_locus_tag=AL55_01777 NZ_KK316828.1 Protein Homology CDS 1941253 1941672 . - 0 ID=cds-WP_003408483.1;Parent=gene-AL55_RS14425;Dbxref=GenBank:WP_003408483.1;Name=WP_003408483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216240.1;locus_tag=AL55_RS14425;product=hypothetical protein;protein_id=WP_003408483.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1941662 1942372 . - . ID=gene-AL55_RS14430;Name=AL55_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14430;old_locus_tag=AL55_01778 NZ_KK316828.1 Protein Homology CDS 1941662 1942372 . - 0 ID=cds-WP_003408486.1;Parent=gene-AL55_RS14430;Dbxref=GenBank:WP_003408486.1;Name=WP_003408486.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216241.1;locus_tag=AL55_RS14430;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_003408486.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1942473 1943858 . + . ID=gene-AL55_RS14435;Name=AL55_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14435;old_locus_tag=AL55_01779 NZ_KK316828.1 Protein Homology CDS 1942473 1943858 . + 0 ID=cds-WP_003900395.1;Parent=gene-AL55_RS14435;Dbxref=GenBank:WP_003900395.1;Name=WP_003900395.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216242.1;locus_tag=AL55_RS14435;product=FAD-binding oxidoreductase;protein_id=WP_003900395.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1943891 1944460 . + . ID=gene-AL55_RS14440;Name=AL55_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14440;old_locus_tag=AL55_01780 NZ_KK316828.1 Protein Homology CDS 1943891 1944460 . + 0 ID=cds-WP_003408493.1;Parent=gene-AL55_RS14440;Dbxref=GenBank:WP_003408493.1;Name=WP_003408493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216243.1;locus_tag=AL55_RS14440;product=TIGR03086 family metal-binding protein;protein_id=WP_003408493.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1944485 1945255 . - . ID=gene-AL55_RS14445;Name=AL55_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14445;old_locus_tag=AL55_01781 NZ_KK316828.1 Protein Homology CDS 1944485 1945255 . - 0 ID=cds-WP_003408495.1;Parent=gene-AL55_RS14445;Dbxref=GenBank:WP_003408495.1;Name=WP_003408495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216244.1;locus_tag=AL55_RS14445;product=VldE C-terminal domain-containing protein;protein_id=WP_003408495.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1945252 1946190 . - . ID=gene-AL55_RS14450;Name=AL55_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14450;old_locus_tag=AL55_01782 NZ_KK316828.1 Protein Homology CDS 1945252 1946190 . - 0 ID=cds-WP_003408497.1;Parent=gene-AL55_RS14450;Dbxref=GenBank:WP_003408497.1;Name=WP_003408497.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216245.1;locus_tag=AL55_RS14450;product=class I SAM-dependent methyltransferase;protein_id=WP_003408497.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1946370 1947901 . - . ID=gene-AL55_RS14455;Name=AL55_RS14455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS14455;old_locus_tag=AL55_01783;pseudo=true NZ_KK316828.1 Protein Homology CDS 1946370 1947901 . - 0 ID=cds-AL55_RS14455;Parent=gene-AL55_RS14455;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216246.1;locus_tag=AL55_RS14455;product=serine hydrolase domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1948051 1948180 . + . ID=gene-AL55_RS28205;Name=AL55_RS28205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28205;partial=true;pseudo=true;start_range=.,1948051 NZ_KK316828.1 Protein Homology CDS 1948051 1948180 . + 0 ID=cds-AL55_RS28205;Parent=gene-AL55_RS28205;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178014.1;locus_tag=AL55_RS28205;partial=true;product=galactofuranosyl transferase;pseudo=true;start_range=.,1948051;transl_table=11 NZ_KK316828.1 RefSeq gene 1948333 1949889 . + . ID=gene-AL55_RS14460;Name=AL55_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14460;old_locus_tag=AL55_01784 NZ_KK316828.1 Protein Homology CDS 1948333 1949889 . + 0 ID=cds-WP_003898989.1;Parent=gene-AL55_RS14460;Dbxref=GenBank:WP_003898989.1;Name=WP_003898989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214748.2;locus_tag=AL55_RS14460;product=succinic semialdehyde dehydrogenase;protein_id=WP_003898989.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1949899 1950447 . - . ID=gene-AL55_RS14465;Name=AL55_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14465;old_locus_tag=AL55_01785 NZ_KK316828.1 Protein Homology CDS 1949899 1950447 . - 0 ID=cds-WP_003408503.1;Parent=gene-AL55_RS14465;Dbxref=GenBank:WP_003408503.1;Name=WP_003408503.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216248.1;locus_tag=AL55_RS14465;product=thioredoxin family protein;protein_id=WP_003408503.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1950511 1951143 . - . ID=gene-AL55_RS14470;Name=AL55_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14470;old_locus_tag=AL55_01786 NZ_KK316828.1 Protein Homology CDS 1950511 1951143 . - 0 ID=cds-WP_003408506.1;Parent=gene-AL55_RS14470;Dbxref=GenBank:WP_003408506.1;Name=WP_003408506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216249.1;locus_tag=AL55_RS14470;product=Rv1733c family protein;protein_id=WP_003408506.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1951430 1951672 . - . ID=gene-AL55_RS14475;Name=AL55_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14475;old_locus_tag=AL55_01787 NZ_KK316828.1 Protein Homology CDS 1951430 1951672 . - 0 ID=cds-WP_003408509.1;Parent=gene-AL55_RS14475;Dbxref=GenBank:WP_003408509.1;Name=WP_003408509.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014000907.1;locus_tag=AL55_RS14475;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_003408509.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1951947 1952540 . - . ID=gene-AL55_RS14480;Name=AL55_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14480;old_locus_tag=AL55_01788 NZ_KK316828.1 Protein Homology CDS 1951947 1952540 . - 0 ID=cds-WP_003898991.1;Parent=gene-AL55_RS14480;Dbxref=GenBank:WP_003898991.1;Name=WP_003898991.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015552.6;locus_tag=AL55_RS14480;product=tellurite resistance/C4-dicarboxylate transporter family protein;protein_id=WP_003898991.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1952543 1952785 . - . ID=gene-AL55_RS14485;Name=AL55_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14485;old_locus_tag=AL55_01789 NZ_KK316828.1 Protein Homology CDS 1952543 1952785 . - 0 ID=cds-WP_003408513.1;Parent=gene-AL55_RS14485;Dbxref=GenBank:WP_003408513.1;Name=WP_003408513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030033.1;locus_tag=AL55_RS14485;product=hypothetical protein;protein_id=WP_003408513.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1952884 1954842 . - . ID=gene-AL55_RS25945;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AL55_RS25945;old_locus_tag=AL55_01790 NZ_KK316828.1 Protein Homology CDS 1952884 1954842 . - 0 ID=cds-WP_003901238.1;Parent=gene-AL55_RS25945;Dbxref=GenBank:WP_003901238.1;Name=WP_003901238.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216252.1;locus_tag=AL55_RS25945;product=respiratory nitrate reductase subunit gamma;protein_id=WP_003901238.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1954839 1956026 . - . ID=gene-AL55_RS14490;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=AL55_RS14490;old_locus_tag=AL55_01791 NZ_KK316828.1 Protein Homology CDS 1954839 1956026 . - 0 ID=cds-WP_003898992.1;Parent=gene-AL55_RS14490;Dbxref=GenBank:WP_003898992.1;Name=WP_003898992.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216253.1;locus_tag=AL55_RS14490;product=nitrate transporter NarK;protein_id=WP_003898992.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1956313 1956597 . + . ID=gene-AL55_RS14495;Name=AL55_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14495;old_locus_tag=AL55_01792 NZ_KK316828.1 Protein Homology CDS 1956313 1956597 . + 0 ID=cds-WP_003408522.1;Parent=gene-AL55_RS14495;Dbxref=GenBank:WP_003408522.1;Name=WP_003408522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216254.1;locus_tag=AL55_RS14495;product=DUF1876 domain-containing protein;protein_id=WP_003408522.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1956611 1958293 . - . ID=gene-AL55_RS14500;Name=AL55_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14500;old_locus_tag=AL55_01793 NZ_KK316828.1 Protein Homology CDS 1956611 1958293 . - 0 ID=cds-WP_003901239.1;Parent=gene-AL55_RS14500;Dbxref=GenBank:WP_003901239.1;Name=WP_003901239.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216255.1;locus_tag=AL55_RS14500;product=SulP family inorganic anion transporter;protein_id=WP_003901239.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1958361 1958573 . + . ID=gene-AL55_RS14505;Name=AL55_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14505;old_locus_tag=AL55_01794 NZ_KK316828.1 Protein Homology CDS 1958361 1958573 . + 0 ID=cds-WP_003408528.1;Parent=gene-AL55_RS14505;Dbxref=GenBank:WP_003408528.1;Name=WP_003408528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216256.1;locus_tag=AL55_RS14505;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003408528.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1958573 1958821 . + . ID=gene-AL55_RS14510;Name=AL55_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14510;old_locus_tag=AL55_01795 NZ_KK316828.1 Protein Homology CDS 1958573 1958821 . + 0 ID=cds-WP_003898996.1;Parent=gene-AL55_RS14510;Dbxref=GenBank:WP_003898996.1;Name=WP_003898996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216257.1;locus_tag=AL55_RS14510;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003898996.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1958829 1959566 . + . ID=gene-AL55_RS14515;Name=AL55_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14515;old_locus_tag=AL55_01796 NZ_KK316828.1 Protein Homology CDS 1958829 1959566 . + 0 ID=cds-WP_003898997.1;Parent=gene-AL55_RS14515;Dbxref=GenBank:WP_003898997.1;Name=WP_003898997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216258.1;locus_tag=AL55_RS14515;product=hypothetical protein;protein_id=WP_003898997.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1959660 1961360 . + . ID=gene-AL55_RS14520;Name=pknE;gbkey=Gene;gene=pknE;gene_biotype=protein_coding;locus_tag=AL55_RS14520;old_locus_tag=AL55_01797 NZ_KK316828.1 Protein Homology CDS 1959660 1961360 . + 0 ID=cds-WP_003898998.1;Parent=gene-AL55_RS14520;Dbxref=GenBank:WP_003898998.1;Name=WP_003898998.1;gbkey=CDS;gene=pknE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216259.1;locus_tag=AL55_RS14520;product=serine/threonine protein kinase PknE;protein_id=WP_003898998.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1961645 1962046 . - . ID=gene-AL55_RS14525;Name=AL55_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14525;old_locus_tag=AL55_01798 NZ_KK316828.1 Protein Homology CDS 1961645 1962046 . - 0 ID=cds-WP_003408538.1;Parent=gene-AL55_RS14525;Dbxref=GenBank:WP_003408538.1;Name=WP_003408538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216260.1;locus_tag=AL55_RS14525;product=hypothetical protein;protein_id=WP_003408538.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1962036 1962647 . - . ID=gene-AL55_RS14530;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=AL55_RS14530;old_locus_tag=AL55_01799 NZ_KK316828.1 Protein Homology CDS 1962036 1962647 . - 0 ID=cds-WP_003898999.1;Parent=gene-AL55_RS14530;Dbxref=GenBank:WP_003898999.1;Name=WP_003898999.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216261.1;locus_tag=AL55_RS14530;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_003898999.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1962794 1964224 . + . ID=gene-AL55_RS14535;Name=pknF;gbkey=Gene;gene=pknF;gene_biotype=protein_coding;locus_tag=AL55_RS14535;old_locus_tag=AL55_01800 NZ_KK316828.1 Protein Homology CDS 1962794 1964224 . + 0 ID=cds-WP_003899000.1;Parent=gene-AL55_RS14535;Dbxref=GenBank:WP_003899000.1;Name=WP_003899000.1;gbkey=CDS;gene=pknF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216262.1;locus_tag=AL55_RS14535;product=serine/threonine protein kinase PknF;protein_id=WP_003899000.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1964286 1966883 . + . ID=gene-AL55_RS14540;Name=AL55_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14540;old_locus_tag=AL55_01801 NZ_KK316828.1 Protein Homology CDS 1964286 1966883 . + 0 ID=cds-WP_003408545.1;Parent=gene-AL55_RS14540;Dbxref=GenBank:WP_003408545.1;Name=WP_003408545.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216263.1;locus_tag=AL55_RS14540;product=ATP transporter ATP-binding protein/permease;protein_id=WP_003408545.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1967316 1967987 . + . ID=gene-AL55_RS14545;Name=AL55_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14545;old_locus_tag=AL55_01802 NZ_KK316828.1 Protein Homology CDS 1967316 1967987 . + 0 ID=cds-WP_003899001.1;Parent=gene-AL55_RS14545;Dbxref=GenBank:WP_003899001.1;Name=WP_003899001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303192.1;locus_tag=AL55_RS14545;product=hypothetical protein;protein_id=WP_003899001.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1967984 1968541 . - . ID=gene-AL55_RS14550;Name=AL55_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14550;old_locus_tag=AL55_01803 NZ_KK316828.1 Protein Homology CDS 1967984 1968541 . - 0 ID=cds-WP_003408556.1;Parent=gene-AL55_RS14550;Dbxref=GenBank:WP_003408556.1;Name=WP_003408556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216265.1;locus_tag=AL55_RS14550;product=DUF6790 family protein;protein_id=WP_003408556.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1968625 1970223 . - . ID=gene-AL55_RS14555;Name=fadD1;gbkey=Gene;gene=fadD1;gene_biotype=protein_coding;locus_tag=AL55_RS14555;old_locus_tag=AL55_01804 NZ_KK316828.1 Protein Homology CDS 1968625 1970223 . - 0 ID=cds-WP_003408558.1;Parent=gene-AL55_RS14555;Dbxref=GenBank:WP_003408558.1;Name=WP_003408558.1;gbkey=CDS;gene=fadD1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216266.1;locus_tag=AL55_RS14555;product=fatty-acid--CoA ligase FadD1;protein_id=WP_003408558.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1970421 1971659 . + . ID=gene-AL55_RS14560;Name=AL55_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14560;old_locus_tag=AL55_01805 NZ_KK316828.1 Protein Homology CDS 1970421 1971659 . + 0 ID=cds-WP_003911631.1;Parent=gene-AL55_RS14560;Dbxref=GenBank:WP_003911631.1;Name=WP_003911631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911631.1;locus_tag=AL55_RS14560;product=FAD-dependent oxidoreductase;protein_id=WP_003911631.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1971768 1972203 . + . ID=gene-AL55_RS14565;Name=AL55_RS14565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS14565;old_locus_tag=AL55_01806;partial=true;pseudo=true;start_range=.,1971768 NZ_KK316828.1 Protein Homology CDS 1971768 1972203 . + 0 ID=cds-AL55_RS14565;Parent=gene-AL55_RS14565;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355438.1;locus_tag=AL55_RS14565;partial=true;product=Gfo/Idh/MocA family protein;pseudo=true;start_range=.,1971768;transl_table=11 NZ_KK316828.1 RefSeq gene 1972270 1975122 . - . ID=gene-AL55_RS14570;Name=AL55_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14570;old_locus_tag=AL55_01807 NZ_KK316828.1 Protein Homology CDS 1972270 1975122 . - 0 ID=cds-WP_031647501.1;Parent=gene-AL55_RS14570;Dbxref=GenBank:WP_031647501.1;Name=WP_031647501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177830.1;locus_tag=AL55_RS14570;product=PPE family protein;protein_id=WP_031647501.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1975326 1976975 . - . ID=gene-AL55_RS14575;Name=AL55_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14575;old_locus_tag=AL55_01808 NZ_KK316828.1 Protein Homology CDS 1975326 1976975 . - 0 ID=cds-WP_072460321.1;Parent=gene-AL55_RS14575;Dbxref=GenBank:WP_072460321.1;Name=WP_072460321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902203.1;locus_tag=AL55_RS14575;product=DUF4185 domain-containing protein;protein_id=WP_072460321.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1977028 1978289 . - . ID=gene-AL55_RS14580;Name=AL55_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14580;old_locus_tag=AL55_01809 NZ_KK316828.1 Protein Homology CDS 1978001 1978289 . - 0 ID=cds-WP_087902221.1-5;Parent=gene-AL55_RS14580;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS14580;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 1977028 1978001 . - 2 ID=cds-WP_087902221.1-5;Parent=gene-AL55_RS14580;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS14580;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1978860 1979099 . - . ID=gene-AL55_RS28050;Name=AL55_RS28050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28050;old_locus_tag=AL55_01811 NZ_KK316828.1 Protein Homology CDS 1978860 1979099 . - 0 ID=cds-WP_077365248.1;Parent=gene-AL55_RS28050;Dbxref=GenBank:WP_077365248.1;Name=WP_077365248.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.6;locus_tag=AL55_RS28050;product=DDE-type integrase/transposase/recombinase;protein_id=WP_077365248.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1979133 1979252 . - . ID=gene-AL55_RS28055;Name=AL55_RS28055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28055 NZ_KK316828.1 Protein Homology CDS 1979133 1979252 . - 0 ID=cds-WP_021083427.1;Parent=gene-AL55_RS28055;Dbxref=GenBank:WP_021083427.1;Name=WP_021083427.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024673.6;locus_tag=AL55_RS28055;product=hypothetical protein;protein_id=WP_021083427.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1979455 1979724 . + . ID=gene-AL55_RS14595;Name=AL55_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14595;old_locus_tag=AL55_01812 NZ_KK316828.1 Protein Homology CDS 1979455 1979724 . + 0 ID=cds-WP_003899012.1;Parent=gene-AL55_RS14595;Dbxref=GenBank:WP_003899012.1;Name=WP_003899012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216282.2;locus_tag=AL55_RS14595;product=metal-sensitive transcriptional regulator;protein_id=WP_003899012.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1979792 1980151 . + . ID=gene-AL55_RS14600;Name=AL55_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14600;old_locus_tag=AL55_01813 NZ_KK316828.1 Protein Homology CDS 1979792 1980151 . + 0 ID=cds-WP_003408743.1;Parent=gene-AL55_RS14600;Dbxref=GenBank:WP_003408743.1;Name=WP_003408743.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216283.1;locus_tag=AL55_RS14600;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003408743.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1980332 1982188 . + . ID=gene-AL55_RS14605;Name=AL55_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14605;old_locus_tag=AL55_01814 NZ_KK316828.1 Protein Homology CDS 1980332 1982188 . + 0 ID=cds-WP_003905649.1;Parent=gene-AL55_RS14605;Dbxref=GenBank:WP_003905649.1;Name=WP_003905649.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177832.1;locus_tag=AL55_RS14605;product=PE family protein;protein_id=WP_003905649.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1982344 1983588 . + . ID=gene-AL55_RS14610;Name=AL55_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14610;old_locus_tag=AL55_01815 NZ_KK316828.1 Protein Homology CDS 1982344 1983588 . + 0 ID=cds-WP_003902200.1;Parent=gene-AL55_RS14610;Dbxref=GenBank:WP_003902200.1;Name=WP_003902200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216285.1;locus_tag=AL55_RS14610;product=amino acid deaminase/aldolase;protein_id=WP_003902200.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1983677 1984882 . + . ID=gene-AL55_RS14615;Name=AL55_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14615;old_locus_tag=AL55_01816 NZ_KK316828.1 Protein Homology CDS 1983677 1984882 . + 0 ID=cds-WP_003911655.1;Parent=gene-AL55_RS14615;Dbxref=GenBank:WP_003911655.1;Name=WP_003911655.1;Ontology_term=GO:0006508,GO:0008235,GO:0008237,GO:0008270;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911655.1;locus_tag=AL55_RS14615;product=M28 family metallopeptidase;protein_id=WP_003911655.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1984879 1986165 . + . ID=gene-AL55_RS14620;Name=AL55_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14620;old_locus_tag=AL55_01817 NZ_KK316828.1 Protein Homology CDS 1984879 1986165 . + 0 ID=cds-WP_003408749.1;Parent=gene-AL55_RS14620;Dbxref=GenBank:WP_003408749.1;Name=WP_003408749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216287.1;locus_tag=AL55_RS14620;product=L-gulono-1%2C4-lactone dehydrogenase;protein_id=WP_003408749.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1986354 1986665 . + . ID=gene-AL55_RS14625;Name=AL55_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14625;old_locus_tag=AL55_01818 NZ_KK316828.1 Protein Homology CDS 1986354 1986665 . + 0 ID=cds-WP_003408753.1;Parent=gene-AL55_RS14625;Dbxref=GenBank:WP_003408753.1;Name=WP_003408753.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216288.1;locus_tag=AL55_RS14625;product=ANTAR domain-containing protein;protein_id=WP_003408753.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1986738 1987484 . - . ID=gene-AL55_RS14630;Name=AL55_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14630;old_locus_tag=AL55_01819 NZ_KK316828.1 Protein Homology CDS 1986738 1987484 . - 0 ID=cds-WP_003408754.1;Parent=gene-AL55_RS14630;Dbxref=GenBank:WP_003408754.1;Name=WP_003408754.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216289.1;locus_tag=AL55_RS14630;product=IclR family transcriptional regulator;protein_id=WP_003408754.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1987550 1988890 . + . ID=gene-AL55_RS14635;Name=AL55_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14635;old_locus_tag=AL55_01820 NZ_KK316828.1 Protein Homology CDS 1987550 1988890 . + 0 ID=cds-WP_003899017.1;Parent=gene-AL55_RS14635;Dbxref=GenBank:WP_003899017.1;Name=WP_003899017.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216290.1;locus_tag=AL55_RS14635;product=FAD-binding oxidoreductase;protein_id=WP_003899017.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 1988890 1989707 . + . ID=gene-AL55_RS14640;Name=AL55_RS14640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS14640;old_locus_tag=AL55_01821;pseudo=true NZ_KK316828.1 Protein Homology CDS 1988890 1989707 . + 0 ID=cds-AL55_RS14640;Parent=gene-AL55_RS14640;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216291.1;locus_tag=AL55_RS14640;product=DAPG hydrolase family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 1989712 1990272 . - . ID=gene-AL55_RS14645;Name=AL55_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14645;old_locus_tag=AL55_01822 NZ_KK316828.1 Protein Homology CDS 1989712 1990272 . - 0 ID=cds-WP_003899018.1;Parent=gene-AL55_RS14645;Dbxref=GenBank:WP_003899018.1;Name=WP_003899018.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216292.1;locus_tag=AL55_RS14645;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899018.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1990463 1991677 . + . ID=gene-AL55_RS14650;Name=cyp144;gbkey=Gene;gene=cyp144;gene_biotype=protein_coding;locus_tag=AL55_RS14650;old_locus_tag=AL55_01823 NZ_KK316828.1 Protein Homology CDS 1990463 1991677 . + 0 ID=cds-WP_003911660.1;Parent=gene-AL55_RS14650;Dbxref=GenBank:WP_003911660.1;Name=WP_003911660.1;gbkey=CDS;gene=cyp144;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911660.1;locus_tag=AL55_RS14650;product=cytochrome P450 Cyp144;protein_id=WP_003911660.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1991798 1992247 . - . ID=gene-AL55_RS14655;Name=AL55_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14655;old_locus_tag=AL55_01824 NZ_KK316828.1 Protein Homology CDS 1991798 1992247 . - 0 ID=cds-WP_003408775.1;Parent=gene-AL55_RS14655;Dbxref=GenBank:WP_003408775.1;Name=WP_003408775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216294.1;locus_tag=AL55_RS14655;product=DUF6941 family protein;protein_id=WP_003408775.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1992403 1994196 . - . ID=gene-AL55_RS14660;Name=AL55_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14660;old_locus_tag=AL55_01825 NZ_KK316828.1 Protein Homology CDS 1992403 1994196 . - 0 ID=cds-WP_003408781.1;Parent=gene-AL55_RS14660;Dbxref=GenBank:WP_003408781.1;Name=WP_003408781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216295.1;locus_tag=AL55_RS14660;product=DUF4407 domain-containing protein;protein_id=WP_003408781.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1994416 1994979 . + . ID=gene-AL55_RS14665;Name=AL55_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14665;old_locus_tag=AL55_01826 NZ_KK316828.1 Protein Homology CDS 1994416 1994979 . + 0 ID=cds-WP_003408792.1;Parent=gene-AL55_RS14665;Dbxref=GenBank:WP_003408792.1;Name=WP_003408792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216296.1;locus_tag=AL55_RS14665;product=hypothetical protein;protein_id=WP_003408792.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1995019 1997193 . - . ID=gene-AL55_RS14670;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=AL55_RS14670;old_locus_tag=AL55_01827 NZ_KK316828.1 Protein Homology CDS 1995019 1997193 . - 0 ID=cds-WP_003408795.1;Parent=gene-AL55_RS14670;Dbxref=GenBank:WP_003408795.1;Name=WP_003408795.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216297.1;locus_tag=AL55_RS14670;product=4-alpha-glucanotransferase;protein_id=WP_003408795.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1997457 1998977 . + . ID=gene-AL55_RS14675;Name=eccB5;gbkey=Gene;gene=eccB5;gene_biotype=protein_coding;locus_tag=AL55_RS14675;old_locus_tag=AL55_01828 NZ_KK316828.1 Protein Homology CDS 1997457 1998977 . + 0 ID=cds-WP_003899021.1;Parent=gene-AL55_RS14675;Dbxref=GenBank:WP_003899021.1;Name=WP_003899021.1;gbkey=CDS;gene=eccB5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216298.1;locus_tag=AL55_RS14675;product=type VII secretion system ESX-5 subunit EccB5;protein_id=WP_003899021.1;transl_table=11 NZ_KK316828.1 RefSeq gene 1998974 2003149 . + . ID=gene-AL55_RS14680;Name=eccC5;gbkey=Gene;gene=eccC5;gene_biotype=protein_coding;locus_tag=AL55_RS14680;old_locus_tag=AL55_01829 NZ_KK316828.1 Protein Homology CDS 1998974 2003149 . + 0 ID=cds-WP_003408799.1;Parent=gene-AL55_RS14680;Dbxref=GenBank:WP_003408799.1;Name=WP_003408799.1;gbkey=CDS;gene=eccC5;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410461.1;locus_tag=AL55_RS14680;product=type VII secretion system ESX-5 FtsK/SpoIIIE family ATPase EccC5;protein_id=WP_003408799.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2003164 2004345 . - . ID=gene-AL55_RS14685;Name=AL55_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14685;old_locus_tag=AL55_01830 NZ_KK316828.1 Protein Homology CDS 2003164 2004345 . - 0 ID=cds-WP_003901253.1;Parent=gene-AL55_RS14685;Dbxref=GenBank:WP_003901253.1;Name=WP_003901253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216301.1;locus_tag=AL55_RS14685;product=cytochrome P450;protein_id=WP_003901253.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2004545 2004748 . + . ID=gene-AL55_RS14690;Name=AL55_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14690;old_locus_tag=AL55_01831 NZ_KK316828.1 Protein Homology CDS 2004545 2004748 . + 0 ID=cds-WP_003408803.1;Parent=gene-AL55_RS14690;Dbxref=GenBank:WP_003408803.1;Name=WP_003408803.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216302.1;locus_tag=AL55_RS14690;product=ferredoxin;protein_id=WP_003408803.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2005018 2006115 . + . ID=gene-AL55_RS14695;Name=AL55_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14695;old_locus_tag=AL55_01832 NZ_KK316828.1 Protein Homology CDS 2005018 2006115 . + 0 ID=cds-WP_003901254.1;Parent=gene-AL55_RS14695;Dbxref=GenBank:WP_003901254.1;Name=WP_003901254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177833.1;locus_tag=AL55_RS14695;product=type VII secretion system ESX-5 target PPE25;protein_id=WP_003901254.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2006194 2006493 . + . ID=gene-AL55_RS14700;Name=AL55_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14700;old_locus_tag=AL55_01833 NZ_KK316828.1 Protein Homology CDS 2006194 2006493 . + 0 ID=cds-WP_003408976.1;Parent=gene-AL55_RS14700;Dbxref=GenBank:WP_003408976.1;Name=WP_003408976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177834.1;locus_tag=AL55_RS14700;product=type VII secretion system ESX-5 target PE18;protein_id=WP_003408976.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2006507 2007688 . + . ID=gene-AL55_RS14705;Name=AL55_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14705;old_locus_tag=AL55_01834 NZ_KK316828.1 Protein Homology CDS 2006507 2007688 . + 0 ID=cds-WP_003408979.1;Parent=gene-AL55_RS14705;Dbxref=GenBank:WP_003408979.1;Name=WP_003408979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177835.1;locus_tag=AL55_RS14705;product=type VII secretion system ESX-5 target PPE26;protein_id=WP_003408979.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2008142 2009194 . + . ID=gene-AL55_RS14710;Name=AL55_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14710;old_locus_tag=AL55_01835 NZ_KK316828.1 Protein Homology CDS 2008142 2009194 . + 0 ID=cds-WP_003408805.1;Parent=gene-AL55_RS14710;Dbxref=GenBank:WP_003408805.1;Name=WP_003408805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177836.1;locus_tag=AL55_RS14710;product=type VII secretion system ESX-5 target PPE27;protein_id=WP_003408805.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2009621 2009920 . + . ID=gene-AL55_RS14715;Name=AL55_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14715;old_locus_tag=AL55_01836 NZ_KK316828.1 Protein Homology CDS 2009621 2009920 . + 0 ID=cds-WP_003408807.1;Parent=gene-AL55_RS14715;Dbxref=GenBank:WP_003408807.1;Name=WP_003408807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177837.1;locus_tag=AL55_RS14715;product=type VII secretion system ESX-5 target PE19;protein_id=WP_003408807.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2010064 2010360 . + . ID=gene-AL55_RS25970;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=pseudogene;locus_tag=AL55_RS25970;pseudo=true NZ_KK316828.1 Protein Homology CDS 2010064 2010360 . + 0 ID=cds-AL55_RS25970;Parent=gene-AL55_RS25970;Note=internal stop;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215554.1;locus_tag=AL55_RS25970;product=type VII secretion system ESX-5 protein EsxJ;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2010411 2010695 . + . ID=gene-AL55_RS14725;Name=esxN;gbkey=Gene;gene=esxN;gene_biotype=protein_coding;locus_tag=AL55_RS14725;old_locus_tag=AL55_01839 NZ_KK316828.1 Protein Homology CDS 2010411 2010695 . + 0 ID=cds-WP_003408840.1;Parent=gene-AL55_RS14725;Dbxref=GenBank:WP_003408840.1;Name=WP_003408840.1;gbkey=CDS;gene=esxN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177838.1;locus_tag=AL55_RS14725;product=effector;protein_id=WP_003408840.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2010783 2011685 . + . ID=gene-AL55_RS14730;Name=AL55_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14730;old_locus_tag=AL55_01840 NZ_KK316828.1 Protein Homology CDS 2010783 2011685 . + 0 ID=cds-WP_003408846.1;Parent=gene-AL55_RS14730;Dbxref=GenBank:WP_003408846.1;Name=WP_003408846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216310.1;locus_tag=AL55_RS14730;product=ESX secretion-associated protein EspG;protein_id=WP_003408846.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2011957 2013468 . + . ID=gene-AL55_RS14735;Name=eccD5;gbkey=Gene;gene=eccD5;gene_biotype=protein_coding;locus_tag=AL55_RS14735;old_locus_tag=AL55_01841 NZ_KK316828.1 Protein Homology CDS 2011957 2013468 . + 0 ID=cds-WP_003900411.1;Parent=gene-AL55_RS14735;Dbxref=GenBank:WP_003900411.1;Name=WP_003900411.1;gbkey=CDS;gene=eccD5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216311.1;locus_tag=AL55_RS14735;product=type VII secretion system ESX-5 subunit EccD5;protein_id=WP_003900411.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2013446 2015203 . + . ID=gene-AL55_RS14740;Name=mycP5;gbkey=Gene;gene=mycP5;gene_biotype=protein_coding;locus_tag=AL55_RS14740;old_locus_tag=AL55_01842 NZ_KK316828.1 Protein Homology CDS 2013446 2015203 . + 0 ID=cds-WP_003408854.1;Parent=gene-AL55_RS14740;Dbxref=GenBank:WP_003408854.1;Name=WP_003408854.1;gbkey=CDS;gene=mycP5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216312.1;locus_tag=AL55_RS14740;product=type VII secretion system ESX-5 serine protease mycosin MycP5;protein_id=WP_003408854.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2015200 2016420 . + . ID=gene-AL55_RS14745;Name=eccE5;gbkey=Gene;gene=eccE5;gene_biotype=protein_coding;locus_tag=AL55_RS14745;old_locus_tag=AL55_01843 NZ_KK316828.1 Protein Homology CDS 2015200 2016420 . + 0 ID=cds-WP_003408859.1;Parent=gene-AL55_RS14745;Dbxref=GenBank:WP_003408859.1;Name=WP_003408859.1;gbkey=CDS;gene=eccE5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216313.1;locus_tag=AL55_RS14745;product=type VII secretion system ESX-5 subunit EccE5;protein_id=WP_003408859.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2016417 2018249 . + . ID=gene-AL55_RS14750;Name=eccA5;gbkey=Gene;gene=eccA5;gene_biotype=protein_coding;locus_tag=AL55_RS14750;old_locus_tag=AL55_01844 NZ_KK316828.1 Protein Homology CDS 2016417 2018249 . + 0 ID=cds-WP_003408868.1;Parent=gene-AL55_RS14750;Dbxref=GenBank:WP_003408868.1;Name=WP_003408868.1;gbkey=CDS;gene=eccA5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216314.1;locus_tag=AL55_RS14750;product=type VII secretion system ESX-5 AAA family ATPase EccA5;protein_id=WP_003408868.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2018876 2019067 . + . ID=gene-AL55_RS14755;Name=AL55_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14755;old_locus_tag=AL55_01845 NZ_KK316828.1 Protein Homology CDS 2018876 2019067 . + 0 ID=cds-WP_003899024.1;Parent=gene-AL55_RS14755;Dbxref=GenBank:WP_003899024.1;Name=WP_003899024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216315.1;locus_tag=AL55_RS14755;product=hypothetical protein;protein_id=WP_003899024.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2019170 2021137 . + . ID=gene-AL55_RS14760;Name=AL55_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14760;old_locus_tag=AL55_01846 NZ_KK316828.1 Protein Homology CDS 2019170 2021137 . + 0 ID=cds-WP_003901256.1;Parent=gene-AL55_RS14760;Dbxref=GenBank:WP_003901256.1;Name=WP_003901256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177839.1;locus_tag=AL55_RS14760;product=PPE family protein;protein_id=WP_003901256.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2021718 2022989 . + . ID=gene-AL55_RS14765;Name=AL55_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14765;old_locus_tag=AL55_01847 NZ_KK316828.1 Protein Homology CDS 2021718 2022989 . + 0 ID=cds-WP_003899026.1;Parent=gene-AL55_RS14765;Dbxref=GenBank:WP_003899026.1;Name=WP_003899026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177840.1;locus_tag=AL55_RS14765;product=PPE family protein;protein_id=WP_003899026.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2023101 2024492 . + . ID=gene-AL55_RS14770;Name=AL55_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14770;old_locus_tag=AL55_01848 NZ_KK316828.1 Protein Homology CDS 2023101 2024492 . + 0 ID=cds-WP_003409061.1;Parent=gene-AL55_RS14770;Dbxref=GenBank:WP_003409061.1;Name=WP_003409061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177841.1;locus_tag=AL55_RS14770;product=PPE family protein;protein_id=WP_003409061.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2024640 2026559 . - . ID=gene-AL55_RS14775;Name=AL55_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14775;old_locus_tag=AL55_01849 NZ_KK316828.1 Protein Homology CDS 2024640 2026559 . - 0 ID=cds-WP_003910446.1;Parent=gene-AL55_RS14775;Dbxref=GenBank:WP_003910446.1;Name=WP_003910446.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177842.1;locus_tag=AL55_RS14775;product=PE family protein;protein_id=WP_003910446.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2026740 2027066 . - . ID=gene-AL55_RS14780;Name=AL55_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14780;old_locus_tag=AL55_01850 NZ_KK316828.1 Protein Homology CDS 2026740 2027066 . - 0 ID=cds-WP_003409065.1;Parent=gene-AL55_RS14780;Dbxref=GenBank:WP_003409065.1;Name=WP_003409065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216320.1;locus_tag=AL55_RS14780;product=DUF732 domain-containing protein;protein_id=WP_003409065.1;transl_table=11 NZ_KK316828.1 cmsearch riboswitch 2027312 2027486 . + . ID=id-NZ_KK316828.1:2027312..2027486;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316828.1 RefSeq gene 2027789 2028088 . + . ID=gene-AL55_RS14790;Name=AL55_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14790;old_locus_tag=AL55_01852 NZ_KK316828.1 Protein Homology CDS 2027789 2028088 . + 0 ID=cds-WP_003900412.1;Parent=gene-AL55_RS14790;Dbxref=GenBank:WP_003900412.1;Name=WP_003900412.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177843.1;locus_tag=AL55_RS14790;product=PE family protein;protein_id=WP_003900412.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2028103 2029314 . + . ID=gene-AL55_RS14795;Name=AL55_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14795;old_locus_tag=AL55_01853 NZ_KK316828.1 Protein Homology CDS 2028103 2029314 . + 0 ID=cds-WP_003409179.1;Parent=gene-AL55_RS14795;Dbxref=GenBank:WP_003409179.1;Name=WP_003409179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916893.1;locus_tag=AL55_RS14795;product=PPE family protein;protein_id=WP_003409179.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2029638 2030867 . + . ID=gene-AL55_RS14800;Name=AL55_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14800;old_locus_tag=AL55_01854 NZ_KK316828.1 Protein Homology CDS 2029638 2030867 . + 0 ID=cds-WP_003901258.1;Parent=gene-AL55_RS14800;Dbxref=GenBank:WP_003901258.1;Name=WP_003901258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177844.1;locus_tag=AL55_RS14800;product=PPE family protein;protein_id=WP_003901258.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2030999 2032405 . + . ID=gene-AL55_RS14805;Name=AL55_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14805;old_locus_tag=AL55_01855 NZ_KK316828.1 Protein Homology CDS 2030999 2032405 . + 0 ID=cds-WP_003899030.1;Parent=gene-AL55_RS14805;Dbxref=GenBank:WP_003899030.1;Name=WP_003899030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177845.1;locus_tag=AL55_RS14805;product=PPE family protein;protein_id=WP_003899030.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2032686 2033006 . + . ID=gene-AL55_RS14810;Name=AL55_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14810;old_locus_tag=AL55_01856 NZ_KK316828.1 Protein Homology CDS 2032686 2033006 . + 0 ID=cds-WP_015288168.1;Parent=gene-AL55_RS14810;Dbxref=GenBank:WP_015288168.1;Name=WP_015288168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288168.1;locus_tag=AL55_RS14810;product=DUF732 domain-containing protein;protein_id=WP_015288168.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2033160 2033864 . + . ID=gene-AL55_RS14815;Name=mgtC;gbkey=Gene;gene=mgtC;gene_biotype=protein_coding;locus_tag=AL55_RS14815;old_locus_tag=AL55_01857 NZ_KK316828.1 Protein Homology CDS 2033160 2033864 . + 0 ID=cds-WP_003899032.1;Parent=gene-AL55_RS14815;Dbxref=GenBank:WP_003899032.1;Name=WP_003899032.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mgtC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216327.1;locus_tag=AL55_RS14815;product=MgtC/SapB family protein;protein_id=WP_003899032.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2033874 2035076 . - . ID=gene-AL55_RS14820;Name=AL55_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14820;old_locus_tag=AL55_01858 NZ_KK316828.1 Protein Homology CDS 2033874 2035076 . - 0 ID=cds-WP_003409193.1;Parent=gene-AL55_RS14820;Dbxref=GenBank:WP_003409193.1;Name=WP_003409193.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216328.1;locus_tag=AL55_RS14820;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003409193.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2035398 2035829 . - . ID=gene-AL55_RS14825;Name=AL55_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14825;old_locus_tag=AL55_01859 NZ_KK316828.1 Protein Homology CDS 2035398 2035829 . - 0 ID=cds-WP_003409199.1;Parent=gene-AL55_RS14825;Dbxref=GenBank:WP_003409199.1;Name=WP_003409199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216329.1;locus_tag=AL55_RS14825;product=DUF4189 domain-containing protein;protein_id=WP_003409199.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2036196 2037140 . + . ID=gene-AL55_RS14830;Name=AL55_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14830;old_locus_tag=AL55_01860 NZ_KK316828.1 Protein Homology CDS 2036196 2037140 . + 0 ID=cds-WP_003899033.1;Parent=gene-AL55_RS14830;Dbxref=GenBank:WP_003899033.1;Name=WP_003899033.1;Ontology_term=GO:0006629,GO:0008610,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA,lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019283784.1;locus_tag=AL55_RS14830;product=sterol desaturase family protein;protein_id=WP_003899033.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2037245 2037910 . + . ID=gene-AL55_RS14835;Name=AL55_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14835;old_locus_tag=AL55_01861 NZ_KK316828.1 Protein Homology CDS 2037245 2037910 . + 0 ID=cds-WP_003409204.1;Parent=gene-AL55_RS14835;Dbxref=GenBank:WP_003409204.1;Name=WP_003409204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216331.1;locus_tag=AL55_RS14835;product=Rv1815 family serine proteinase;protein_id=WP_003409204.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2037991 2038677 . + . ID=gene-AL55_RS14840;Name=AL55_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14840;old_locus_tag=AL55_01862 NZ_KK316828.1 Protein Homology CDS 2037991 2038677 . + 0 ID=cds-WP_003899034.1;Parent=gene-AL55_RS14840;Dbxref=GenBank:WP_003899034.1;Name=WP_003899034.1;Ontology_term=GO:0006355,GO:0045892,GO:0046677,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725120.1;locus_tag=AL55_RS14840;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899034.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2038816 2039093 . + . ID=gene-AL55_RS27695;Name=AL55_RS27695;end_range=2039093,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27695;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 2038816 2039093 . + 0 ID=cds-AL55_RS27695;Parent=gene-AL55_RS27695;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2039093,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977032.1;locus_tag=AL55_RS27695;partial=true;product=VOC family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2039164 2039238 . + . ID=gene-AL55_RS26960;Name=AL55_RS26960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS26960;partial=true;pseudo=true;start_range=.,2039164 NZ_KK316828.1 Protein Homology CDS 2039164 2039238 . + 0 ID=cds-AL55_RS26960;Parent=gene-AL55_RS26960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217793.1;locus_tag=AL55_RS26960;partial=true;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;pseudo=true;start_range=.,2039164;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2039341 2039432 . + . ID=gene-AL55_RS28210;Name=AL55_RS28210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28210;partial=true;pseudo=true;start_range=.,2039341 NZ_KK316828.1 Protein Homology CDS 2039341 2039432 . + 2 ID=cds-AL55_RS28210;Parent=gene-AL55_RS28210;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217793.1;locus_tag=AL55_RS28210;partial=true;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;pseudo=true;start_range=.,2039341;transl_table=11 NZ_KK316828.1 RefSeq gene 2039506 2040969 . + . ID=gene-AL55_RS14845;Name=AL55_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14845;old_locus_tag=AL55_01863 NZ_KK316828.1 Protein Homology CDS 2039506 2040969 . + 0 ID=cds-WP_003409207.1;Parent=gene-AL55_RS14845;Dbxref=GenBank:WP_003409207.1;Name=WP_003409207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216333.1;locus_tag=AL55_RS14845;product=FAD-binding protein;protein_id=WP_003409207.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2042073 2042594 . - . ID=gene-AL55_RS27700;Name=AL55_RS27700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27700;partial=true;pseudo=true;start_range=.,2042073 NZ_KK316828.1 Protein Homology CDS 2042073 2042594 . - 0 ID=cds-AL55_RS27700;Parent=gene-AL55_RS27700;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177749.1;locus_tag=AL55_RS27700;partial=true;product=PE family protein;pseudo=true;start_range=.,2042073;transl_table=11 NZ_KK316828.1 RefSeq gene 2042729 2044648 . - . ID=gene-AL55_RS14855;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=AL55_RS14855;old_locus_tag=AL55_01865 NZ_KK316828.1 Protein Homology CDS 2042729 2044648 . - 0 ID=cds-WP_003900416.1;Parent=gene-AL55_RS14855;Dbxref=GenBank:WP_003900416.1;Name=WP_003900416.1;gbkey=CDS;gene=bacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216335.1;locus_tag=AL55_RS14855;product=vitamin B12 ABC transporter pemease/ATP-binding protein BacA;protein_id=WP_003900416.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2044719 2046362 . + . ID=gene-AL55_RS14860;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=AL55_RS14860;old_locus_tag=AL55_01866 NZ_KK316828.1 Protein Homology CDS 2044719 2046362 . + 0 ID=cds-WP_003409218.1;Parent=gene-AL55_RS14860;Dbxref=GenBank:WP_003409218.1;Name=WP_003409218.1;gbkey=CDS;gene=ilvG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216336.1;locus_tag=AL55_RS14860;product=acetolactate synthase;protein_id=WP_003409218.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2046467 2048803 . + . ID=gene-AL55_RS14865;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=AL55_RS14865;old_locus_tag=AL55_01867 NZ_KK316828.1 Protein Homology CDS 2046467 2048803 . + 0 ID=cds-WP_009940597.1;Parent=gene-AL55_RS14865;Dbxref=GenBank:WP_009940597.1;Name=WP_009940597.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524,GO:0016020;gbkey=CDS;gene=secA2;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908708.1;locus_tag=AL55_RS14865;product=accessory Sec system translocase SecA2;protein_id=WP_009940597.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2049000 2049629 . + . ID=gene-AL55_RS14870;Name=AL55_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14870;old_locus_tag=AL55_01868 NZ_KK316828.1 Protein Homology CDS 2049000 2049629 . + 0 ID=cds-WP_003409227.1;Parent=gene-AL55_RS14870;Dbxref=GenBank:WP_003409227.1;Name=WP_003409227.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216338.1;locus_tag=AL55_RS14870;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_003409227.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2049622 2050545 . + . ID=gene-AL55_RS14875;Name=AL55_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14875;old_locus_tag=AL55_01869 NZ_KK316828.1 Protein Homology CDS 2049622 2050545 . + 0 ID=cds-WP_031695409.1;Parent=gene-AL55_RS14875;Dbxref=GenBank:WP_031695409.1;Name=WP_031695409.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216339.1;locus_tag=AL55_RS14875;product=DUF881 domain-containing protein;protein_id=WP_031695409.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2050574 2050939 . + . ID=gene-AL55_RS14880;Name=AL55_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14880;old_locus_tag=AL55_01870 NZ_KK316828.1 Protein Homology CDS 2050574 2050939 . + 0 ID=cds-WP_003899037.1;Parent=gene-AL55_RS14880;Dbxref=GenBank:WP_003899037.1;Name=WP_003899037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216340.1;locus_tag=AL55_RS14880;product=small basic family protein;protein_id=WP_003899037.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2050956 2051834 . + . ID=gene-AL55_RS14885;Name=AL55_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14885;old_locus_tag=AL55_01871 NZ_KK316828.1 Protein Homology CDS 2050956 2051834 . + 0 ID=cds-WP_003899038.1;Parent=gene-AL55_RS14885;Dbxref=GenBank:WP_003899038.1;Name=WP_003899038.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216341.1;locus_tag=AL55_RS14885;product=DUF881 domain-containing protein;protein_id=WP_003899038.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2051872 2052276 . + . ID=gene-AL55_RS14890;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AL55_RS14890;old_locus_tag=AL55_01872 NZ_KK316828.1 Protein Homology CDS 2051872 2052276 . + 0 ID=cds-WP_003901263.1;Parent=gene-AL55_RS14890;Dbxref=GenBank:WP_003901263.1;Name=WP_003901263.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216342.1;locus_tag=AL55_RS14890;product=glycine cleavage system protein GcvH;protein_id=WP_003901263.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2052516 2053004 . + . ID=gene-AL55_RS14895;Name=garA;gbkey=Gene;gene=garA;gene_biotype=protein_coding;locus_tag=AL55_RS14895;old_locus_tag=AL55_01873 NZ_KK316828.1 Protein Homology CDS 2052516 2053004 . + 0 ID=cds-WP_003899041.1;Parent=gene-AL55_RS14895;Dbxref=GenBank:WP_003899041.1;Name=WP_003899041.1;gbkey=CDS;gene=garA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216343.1;locus_tag=AL55_RS14895;product=glycogen accumulation regulator GarA;protein_id=WP_003899041.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2053001 2053744 . + . ID=gene-AL55_RS14900;Name=ftsR;gbkey=Gene;gene=ftsR;gene_biotype=protein_coding;locus_tag=AL55_RS14900;old_locus_tag=AL55_01874 NZ_KK316828.1 Protein Homology CDS 2053001 2053744 . + 0 ID=cds-WP_003409239.1;Parent=gene-AL55_RS14900;Dbxref=GenBank:WP_003409239.1;Name=WP_003409239.1;gbkey=CDS;gene=ftsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216344.1;locus_tag=AL55_RS14900;product=transcriptional regulator FtsR;protein_id=WP_003409239.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2053863 2054357 . + . ID=gene-AL55_RS14905;Name=AL55_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14905;old_locus_tag=AL55_01875 NZ_KK316828.1 Protein Homology CDS 2053863 2054357 . + 0 ID=cds-WP_003409242.1;Parent=gene-AL55_RS14905;Dbxref=GenBank:WP_003409242.1;Name=WP_003409242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409242.1;locus_tag=AL55_RS14905;product=bifunctional nuclease family protein;protein_id=WP_003409242.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2054750 2055382 . + . ID=gene-AL55_RS14910;Name=AL55_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14910;old_locus_tag=AL55_01876 NZ_KK316828.1 Protein Homology CDS 2054750 2055382 . + 0 ID=cds-WP_003911669.1;Parent=gene-AL55_RS14910;Dbxref=GenBank:WP_003911669.1;Name=WP_003911669.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007771372.1;locus_tag=AL55_RS14910;product=MerR family transcriptional regulator;protein_id=WP_003911669.1;transl_table=11 NZ_KK316828.1 cmsearch riboswitch 2055477 2055574 . + . ID=id-NZ_KK316828.1:2055477..2055574;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316828.1 cmsearch riboswitch 2055575 2055708 . + . ID=id-NZ_KK316828.1:2055575..2055708;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316828.1 RefSeq gene 2055741 2058566 . + . ID=gene-AL55_RS14920;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=AL55_RS14920;old_locus_tag=AL55_01878 NZ_KK316828.1 Protein Homology CDS 2055741 2058566 . + 0 ID=cds-WP_003900418.1;Parent=gene-AL55_RS14920;Dbxref=GenBank:WP_003900418.1;Name=WP_003900418.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216348.1;locus_tag=AL55_RS14920;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_003900418.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2058793 2059653 . - . ID=gene-AL55_RS14925;Name=AL55_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14925;old_locus_tag=AL55_01879 NZ_KK316828.1 Protein Homology CDS 2058793 2059653 . - 0 ID=cds-WP_003409254.1;Parent=gene-AL55_RS14925;Dbxref=GenBank:WP_003409254.1;Name=WP_003409254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216349.1;locus_tag=AL55_RS14925;product=haloalkane dehalogenase;protein_id=WP_003409254.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2059694 2060560 . + . ID=gene-AL55_RS14930;Name=lipZ;gbkey=Gene;gene=lipZ;gene_biotype=protein_coding;locus_tag=AL55_RS14930;old_locus_tag=AL55_01880 NZ_KK316828.1 Protein Homology CDS 2059694 2060560 . + 0 ID=cds-WP_003409255.1;Parent=gene-AL55_RS14930;Dbxref=GenBank:WP_003409255.1;Name=WP_003409255.1;gbkey=CDS;gene=lipZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216350.1;locus_tag=AL55_RS14930;product=alpha/beta fold hydrolase;protein_id=WP_003409255.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2060565 2062451 . - . ID=gene-AL55_RS14935;Name=AL55_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14935;old_locus_tag=AL55_01881 NZ_KK316828.1 Protein Homology CDS 2060565 2062451 . - 0 ID=cds-WP_003905666.1;Parent=gene-AL55_RS14935;Dbxref=GenBank:WP_003905666.1;Name=WP_003905666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216351.1;locus_tag=AL55_RS14935;product=CocE/NonD family hydrolase;protein_id=WP_003905666.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2062467 2064500 . - . ID=gene-AL55_RS14940;Name=AL55_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14940;old_locus_tag=AL55_01882 NZ_KK316828.1 Protein Homology CDS 2062467 2064500 . - 0 ID=cds-WP_003901265.1;Parent=gene-AL55_RS14940;Dbxref=GenBank:WP_003901265.1;Name=WP_003901265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216352.1;locus_tag=AL55_RS14940;product=substrate-binding domain-containing protein;protein_id=WP_003901265.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2064620 2066845 . - . ID=gene-AL55_RS14945;Name=glcB;gbkey=Gene;gene=glcB;gene_biotype=protein_coding;locus_tag=AL55_RS14945;old_locus_tag=AL55_01883 NZ_KK316828.1 Protein Homology CDS 2064620 2066845 . - 0 ID=cds-WP_003905667.1;Parent=gene-AL55_RS14945;Dbxref=GenBank:WP_003905667.1;Name=WP_003905667.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=glcB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216353.1;locus_tag=AL55_RS14945;product=malate synthase G;protein_id=WP_003905667.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2067121 2067516 . - . ID=gene-AL55_RS14950;Name=AL55_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14950;old_locus_tag=AL55_01884 NZ_KK316828.1 Protein Homology CDS 2067121 2067516 . - 0 ID=cds-WP_003409273.1;Parent=gene-AL55_RS14950;Dbxref=GenBank:WP_003409273.1;Name=WP_003409273.1;Ontology_term=GO:0004540,GO:0046872,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216354.1;locus_tag=AL55_RS14950;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003409273.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2067513 2067776 . - . ID=gene-AL55_RS14955;Name=AL55_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14955;old_locus_tag=AL55_01885 NZ_KK316828.1 Protein Homology CDS 2067513 2067776 . - 0 ID=cds-WP_003409276.1;Parent=gene-AL55_RS14955;Dbxref=GenBank:WP_003409276.1;Name=WP_003409276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216355.1;locus_tag=AL55_RS14955;product=antitoxin;protein_id=WP_003409276.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2067835 2069382 . - . ID=gene-AL55_RS14960;Name=AL55_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14960;old_locus_tag=AL55_01886 NZ_KK316828.1 Protein Homology CDS 2067835 2069382 . - 0 ID=cds-WP_003904712.1;Parent=gene-AL55_RS14960;Dbxref=GenBank:WP_003904712.1;Name=WP_003904712.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177847.1;locus_tag=AL55_RS14960;product=PE family protein;protein_id=WP_003904712.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2069545 2070582 . - . ID=gene-AL55_RS14965;Name=AL55_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14965;old_locus_tag=AL55_01887 NZ_KK316828.1 Protein Homology CDS 2069545 2070582 . - 0 ID=cds-WP_003900419.1;Parent=gene-AL55_RS14965;Dbxref=GenBank:WP_003900419.1;Name=WP_003900419.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216357.1;locus_tag=AL55_RS14965;product=hemolysin family protein;protein_id=WP_003900419.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2070582 2071949 . - . ID=gene-AL55_RS14970;Name=AL55_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14970;old_locus_tag=AL55_01888 NZ_KK316828.1 Protein Homology CDS 2070582 2071949 . - 0 ID=cds-WP_003899046.1;Parent=gene-AL55_RS14970;Dbxref=GenBank:WP_003899046.1;Name=WP_003899046.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216358.1;locus_tag=AL55_RS14970;product=hemolysin family protein;protein_id=WP_003899046.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2072123 2073562 . - . ID=gene-AL55_RS14975;Name=AL55_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14975;old_locus_tag=AL55_01889 NZ_KK316828.1 Protein Homology CDS 2072123 2073562 . - 0 ID=cds-WP_003902189.1;Parent=gene-AL55_RS14975;Dbxref=GenBank:WP_003902189.1;Name=WP_003902189.1;Ontology_term=GO:0003938;gbkey=CDS;go_function=IMP dehydrogenase activity|0003938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216359.1;locus_tag=AL55_RS14975;product=GuaB1 family IMP dehydrogenase-related protein;protein_id=WP_003902189.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2073595 2075046 . - . ID=gene-AL55_RS14980;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AL55_RS14980;old_locus_tag=AL55_01890 NZ_KK316828.1 Protein Homology CDS 2073595 2075046 . - 0 ID=cds-WP_003409284.1;Parent=gene-AL55_RS14980;Dbxref=GenBank:WP_003409284.1;Name=WP_003409284.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177848.1;locus_tag=AL55_RS14980;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_003409284.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2075076 2076026 . - . ID=gene-AL55_RS14985;Name=blaR;gbkey=Gene;gene=blaR;gene_biotype=protein_coding;locus_tag=AL55_RS14985;old_locus_tag=AL55_01891 NZ_KK316828.1 Protein Homology CDS 2075076 2076026 . - 0 ID=cds-WP_003409298.1;Parent=gene-AL55_RS14985;Dbxref=GenBank:WP_003409298.1;Name=WP_003409298.1;Ontology_term=GO:0008233,GO:0046872,GO:0016020;gbkey=CDS;gene=blaR;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216361.1;locus_tag=AL55_RS14985;product=M56 family metallopeptidase;protein_id=WP_003409298.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2076041 2076457 . - . ID=gene-AL55_RS14990;Name=blaI;gbkey=Gene;gene=blaI;gene_biotype=protein_coding;locus_tag=AL55_RS14990;old_locus_tag=AL55_01892 NZ_KK316828.1 Protein Homology CDS 2076041 2076457 . - 0 ID=cds-WP_003409301.1;Parent=gene-AL55_RS14990;Dbxref=GenBank:WP_003409301.1;Name=WP_003409301.1;gbkey=CDS;gene=blaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216362.1;locus_tag=AL55_RS14990;product=transcriptional repressor BlaI;protein_id=WP_003409301.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2076735 2077157 . + . ID=gene-AL55_RS14995;Name=AL55_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS14995;old_locus_tag=AL55_01893 NZ_KK316828.1 Protein Homology CDS 2076735 2077157 . + 0 ID=cds-WP_003902187.1;Parent=gene-AL55_RS14995;Dbxref=GenBank:WP_003902187.1;Name=WP_003902187.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216363.1;locus_tag=AL55_RS14995;product=PaaI family thioesterase;protein_id=WP_003902187.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2077206 2077508 . + . ID=gene-AL55_RS15000;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;locus_tag=AL55_RS15000;old_locus_tag=AL55_01894 NZ_KK316828.1 Protein Homology CDS 2077206 2077508 . + 0 ID=cds-WP_003409305.1;Parent=gene-AL55_RS15000;Dbxref=GenBank:WP_003409305.1;Name=WP_003409305.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;gene=ureA;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216364.1;locus_tag=AL55_RS15000;product=urease subunit gamma;protein_id=WP_003409305.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2077505 2077819 . + . ID=gene-AL55_RS15005;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=AL55_RS15005;old_locus_tag=AL55_01895 NZ_KK316828.1 Protein Homology CDS 2077505 2077819 . + 0 ID=cds-WP_003409308.1;Parent=gene-AL55_RS15005;Dbxref=GenBank:WP_003409308.1;Name=WP_003409308.1;gbkey=CDS;gene=ureB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216365.1;locus_tag=AL55_RS15005;product=urease subunit beta;protein_id=WP_003409308.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2077819 2079552 . + . ID=gene-AL55_RS15010;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=AL55_RS15010;old_locus_tag=AL55_01896 NZ_KK316828.1 Protein Homology CDS 2077819 2079552 . + 0 ID=cds-WP_003899049.1;Parent=gene-AL55_RS15010;Dbxref=GenBank:WP_003899049.1;Name=WP_003899049.1;Ontology_term=GO:0008152,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216366.1;locus_tag=AL55_RS15010;product=urease subunit alpha;protein_id=WP_003899049.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2079552 2080187 . + . ID=gene-AL55_RS15015;Name=ureF;gbkey=Gene;gene=ureF;gene_biotype=protein_coding;locus_tag=AL55_RS15015;old_locus_tag=AL55_01897 NZ_KK316828.1 Protein Homology CDS 2079552 2080187 . + 0 ID=cds-WP_003899050.1;Parent=gene-AL55_RS15015;Dbxref=GenBank:WP_003899050.1;Name=WP_003899050.1;Ontology_term=GO:0016151;gbkey=CDS;gene=ureF;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216367.1;locus_tag=AL55_RS15015;product=urease accessory protein UreF;protein_id=WP_003899050.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2080198 2080872 . + . ID=gene-AL55_RS15020;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=AL55_RS15020;old_locus_tag=AL55_01898 NZ_KK316828.1 Protein Homology CDS 2080198 2080872 . + 0 ID=cds-WP_003409313.1;Parent=gene-AL55_RS15020;Dbxref=GenBank:WP_003409313.1;Name=WP_003409313.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216368.1;locus_tag=AL55_RS15020;product=urease accessory protein UreG;protein_id=WP_003409313.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2080862 2081506 . + . ID=gene-AL55_RS15025;Name=ureD;gbkey=Gene;gene=ureD;gene_biotype=protein_coding;locus_tag=AL55_RS15025;old_locus_tag=AL55_01899 NZ_KK316828.1 Protein Homology CDS 2080862 2081506 . + 0 ID=cds-WP_003900422.1;Parent=gene-AL55_RS15025;Dbxref=GenBank:WP_003900422.1;Name=WP_003900422.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;gene=ureD;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900422.1;locus_tag=AL55_RS15025;product=urease accessory protein UreD;protein_id=WP_003900422.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2081509 2082900 . - . ID=gene-AL55_RS15030;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=AL55_RS15030;old_locus_tag=AL55_01900 NZ_KK316828.1 Protein Homology CDS 2081509 2082900 . - 0 ID=cds-WP_003409317.1;Parent=gene-AL55_RS15030;Dbxref=GenBank:WP_003409317.1;Name=WP_003409317.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;gene=ndh;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216370.1;locus_tag=AL55_RS15030;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003409317.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2083042 2083965 . - . ID=gene-AL55_RS15035;Name=AL55_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15035;old_locus_tag=AL55_01901 NZ_KK316828.1 Protein Homology CDS 2083042 2083965 . - 0 ID=cds-WP_003409319.1;Parent=gene-AL55_RS15035;Dbxref=GenBank:WP_003409319.1;Name=WP_003409319.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216371.1;locus_tag=AL55_RS15035;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003409319.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2084004 2084681 . - . ID=gene-AL55_RS15040;Name=AL55_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15040;old_locus_tag=AL55_01902 NZ_KK316828.1 Protein Homology CDS 2084004 2084681 . - 0 ID=cds-WP_003409323.1;Parent=gene-AL55_RS15040;Dbxref=GenBank:WP_003409323.1;Name=WP_003409323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216372.1;locus_tag=AL55_RS15040;product=SDR family oxidoreductase;protein_id=WP_003409323.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2084843 2085628 . + . ID=gene-AL55_RS15045;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=AL55_RS15045;old_locus_tag=AL55_01903 NZ_KK316828.1 Protein Homology CDS 2084843 2085628 . + 0 ID=cds-WP_003409326.1;Parent=gene-AL55_RS15045;Dbxref=GenBank:WP_003409326.1;Name=WP_003409326.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216373.1;locus_tag=AL55_RS15045;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_003409326.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2085631 2086425 . + . ID=gene-AL55_RS15050;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=AL55_RS15050;old_locus_tag=AL55_01904 NZ_KK316828.1 Protein Homology CDS 2085631 2086425 . + 0 ID=cds-WP_003409329.1;Parent=gene-AL55_RS15050;Dbxref=GenBank:WP_003409329.1;Name=WP_003409329.1;Ontology_term=GO:0055085,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216374.1;locus_tag=AL55_RS15050;product=ABC transporter permease;protein_id=WP_003409329.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2086432 2087541 . + . ID=gene-AL55_RS15055;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=AL55_RS15055;old_locus_tag=AL55_01905 NZ_KK316828.1 Protein Homology CDS 2086432 2087541 . + 0 ID=cds-WP_003899051.1;Parent=gene-AL55_RS15055;Dbxref=GenBank:WP_003899051.1;Name=WP_003899051.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=modC;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216375.1;locus_tag=AL55_RS15055;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_003899051.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2087594 2088571 . + . ID=gene-AL55_RS15060;Name=apa;gbkey=Gene;gene=apa;gene_biotype=protein_coding;locus_tag=AL55_RS15060;old_locus_tag=AL55_01906 NZ_KK316828.1 Protein Homology CDS 2087594 2088571 . + 0 ID=cds-WP_003409337.1;Parent=gene-AL55_RS15060;Dbxref=GenBank:WP_003409337.1;Name=WP_003409337.1;gbkey=CDS;gene=apa;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177849.1;locus_tag=AL55_RS15060;product=adhesin Apa;protein_id=WP_003409337.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2089023 2089328 . + . ID=gene-AL55_RS15065;Name=AL55_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15065;old_locus_tag=AL55_01907 NZ_KK316828.1 Protein Homology CDS 2089023 2089328 . + 0 ID=cds-WP_003409339.1;Parent=gene-AL55_RS15065;Dbxref=GenBank:WP_003409339.1;Name=WP_003409339.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216377.1;locus_tag=AL55_RS15065;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_003409339.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2089403 2090443 . + . ID=gene-AL55_RS15070;Name=adhA;gbkey=Gene;gene=adhA;gene_biotype=protein_coding;locus_tag=AL55_RS15070;old_locus_tag=AL55_01908 NZ_KK316828.1 Protein Homology CDS 2089403 2090443 . + 0 ID=cds-WP_003409345.1;Parent=gene-AL55_RS15070;Dbxref=GenBank:WP_003409345.1;Name=WP_003409345.1;Ontology_term=GO:0006113,GO:0004022,GO:0008270;gbkey=CDS;gene=adhA;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216378.1;locus_tag=AL55_RS15070;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_003409345.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2090450 2091220 . - . ID=gene-AL55_RS15075;Name=AL55_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15075;old_locus_tag=AL55_01909 NZ_KK316828.1 Protein Homology CDS 2090450 2091220 . - 0 ID=cds-WP_003899053.1;Parent=gene-AL55_RS15075;Dbxref=GenBank:WP_003899053.1;Name=WP_003899053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003927504.1;locus_tag=AL55_RS15075;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_003899053.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2091213 2091899 . - . ID=gene-AL55_RS15080;Name=AL55_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15080;old_locus_tag=AL55_01910 NZ_KK316828.1 Protein Homology CDS 2091213 2091899 . - 0 ID=cds-WP_003911693.1;Parent=gene-AL55_RS15080;Dbxref=GenBank:WP_003911693.1;Name=WP_003911693.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911693.1;locus_tag=AL55_RS15080;product=MOSC domain-containing protein;protein_id=WP_003911693.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2091965 2092825 . - . ID=gene-AL55_RS15085;Name=AL55_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15085;old_locus_tag=AL55_01911 NZ_KK316828.1 Protein Homology CDS 2091965 2092825 . - 0 ID=cds-WP_003409355.1;Parent=gene-AL55_RS15085;Dbxref=GenBank:WP_003409355.1;Name=WP_003409355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216381.1;locus_tag=AL55_RS15085;product=SDR family oxidoreductase;protein_id=WP_003409355.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2092921 2095335 . + . ID=gene-AL55_RS15090;Name=AL55_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15090;old_locus_tag=AL55_01912 NZ_KK316828.1 Protein Homology CDS 2092921 2095335 . + 0 ID=cds-WP_003900424.1;Parent=gene-AL55_RS15090;Dbxref=GenBank:WP_003900424.1;Name=WP_003900424.1;Ontology_term=GO:0003824,GO:0008410;gbkey=CDS;go_function=catalytic activity|0003824||IEA,CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010924453.1;locus_tag=AL55_RS15090;product=CaiB/BaiF CoA-transferase family protein;protein_id=WP_003900424.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2095623 2097107 . + . ID=gene-AL55_RS15095;Name=AL55_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15095;old_locus_tag=AL55_01913 NZ_KK316828.1 Protein Homology CDS 2095623 2097107 . + 0 ID=cds-WP_003409362.1;Parent=gene-AL55_RS15095;Dbxref=GenBank:WP_003409362.1;Name=WP_003409362.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216383.1;locus_tag=AL55_RS15095;product=acetyl-CoA acetyltransferase;protein_id=WP_003409362.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2097206 2099305 . + . ID=gene-AL55_RS15100;Name=AL55_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15100;old_locus_tag=AL55_01914 NZ_KK316828.1 Protein Homology CDS 2097206 2099305 . + 0 ID=cds-WP_003409374.1;Parent=gene-AL55_RS15100;Dbxref=GenBank:WP_003409374.1;Name=WP_003409374.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216384.1;locus_tag=AL55_RS15100;product=NAD(P)H-binding protein;protein_id=WP_003409374.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2099319 2100554 . - . ID=gene-AL55_RS15105;Name=AL55_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15105;old_locus_tag=AL55_01915 NZ_KK316828.1 Protein Homology CDS 2099319 2100554 . - 0 ID=cds-WP_003899055.1;Parent=gene-AL55_RS15105;Dbxref=GenBank:WP_003899055.1;Name=WP_003899055.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216385.1;locus_tag=AL55_RS15105;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003899055.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2100654 2101268 . - . ID=gene-AL55_RS15110;Name=AL55_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15110;old_locus_tag=AL55_01916 NZ_KK316828.1 Protein Homology CDS 2100654 2101268 . - 0 ID=cds-WP_003917541.1;Parent=gene-AL55_RS15110;Dbxref=GenBank:WP_003917541.1;Name=WP_003917541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917541.1;locus_tag=AL55_RS15110;product=endonuclease;protein_id=WP_003917541.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2101354 2101743 . - . ID=gene-AL55_RS15115;Name=AL55_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15115;old_locus_tag=AL55_01917 NZ_KK316828.1 Protein Homology CDS 2101354 2101743 . - 0 ID=cds-WP_003409380.1;Parent=gene-AL55_RS15115;Dbxref=GenBank:WP_003409380.1;Name=WP_003409380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216387.1;locus_tag=AL55_RS15115;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003409380.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2101766 2103010 . - . ID=gene-AL55_RS15120;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AL55_RS15120;old_locus_tag=AL55_01918 NZ_KK316828.1 Protein Homology CDS 2101766 2103010 . - 0 ID=cds-WP_003901276.1;Parent=gene-AL55_RS15120;Dbxref=GenBank:WP_003901276.1;Name=WP_003901276.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216388.1;locus_tag=AL55_RS15120;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_003901276.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2103033 2103470 . + . ID=gene-AL55_RS15125;Name=AL55_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15125;old_locus_tag=AL55_01919 NZ_KK316828.1 Protein Homology CDS 2103033 2103470 . + 0 ID=cds-WP_003409385.1;Parent=gene-AL55_RS15125;Dbxref=GenBank:WP_003409385.1;Name=WP_003409385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216389.1;locus_tag=AL55_RS15125;product=DUF1810 domain-containing protein;protein_id=WP_003409385.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2103525 2104229 . + . ID=gene-AL55_RS15130;Name=AL55_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15130;old_locus_tag=AL55_01920 NZ_KK316828.1 Protein Homology CDS 2103525 2104229 . + 0 ID=cds-WP_003899058.1;Parent=gene-AL55_RS15130;Dbxref=GenBank:WP_003899058.1;Name=WP_003899058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487708.1;locus_tag=AL55_RS15130;product=EthD domain-containing protein;protein_id=WP_003899058.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2104240 2104683 . + . ID=gene-AL55_RS15135;Name=AL55_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15135;old_locus_tag=AL55_01921 NZ_KK316828.1 Protein Homology CDS 2104240 2104683 . + 0 ID=cds-WP_003899059.1;Parent=gene-AL55_RS15135;Dbxref=GenBank:WP_003899059.1;Name=WP_003899059.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216391.1;locus_tag=AL55_RS15135;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003899059.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2104689 2104901 . - . ID=gene-AL55_RS25990;Name=AL55_RS25990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25990 NZ_KK316828.1 Protein Homology CDS 2104689 2104901 . - 0 ID=cds-WP_003910872.1;Parent=gene-AL55_RS25990;Dbxref=GenBank:WP_003910872.1;Name=WP_003910872.1;Ontology_term=GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003910872.1;locus_tag=AL55_RS25990;product=(2Fe-2S)-binding protein;protein_id=WP_003910872.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2105199 2105678 . + . ID=gene-AL55_RS15140;Name=bfrA;gbkey=Gene;gene=bfrA;gene_biotype=protein_coding;locus_tag=AL55_RS15140;old_locus_tag=AL55_01922 NZ_KK316828.1 Protein Homology CDS 2105199 2105678 . + 0 ID=cds-WP_003409398.1;Parent=gene-AL55_RS15140;Dbxref=GenBank:WP_003409398.1;Name=WP_003409398.1;gbkey=CDS;gene=bfrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003876561.1;locus_tag=AL55_RS15140;product=bacterioferritin BfrA;protein_id=WP_003409398.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2105763 2107826 . + . ID=gene-AL55_RS15145;Name=AL55_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15145;old_locus_tag=AL55_01923 NZ_KK316828.1 Protein Homology CDS 2105763 2107826 . + 0 ID=cds-WP_003899060.1;Parent=gene-AL55_RS15145;Dbxref=GenBank:WP_003899060.1;Name=WP_003899060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216393.1;locus_tag=AL55_RS15145;product=Rv1877 family multidrug efflux MFS transporter;protein_id=WP_003899060.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2107881 2109233 . + . ID=gene-AL55_RS15150;Name=AL55_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15150;old_locus_tag=AL55_01924 NZ_KK316828.1 Protein Homology CDS 2107881 2109233 . + 0 ID=cds-WP_003409401.1;Parent=gene-AL55_RS15150;Dbxref=GenBank:WP_003409401.1;Name=WP_003409401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216394.1;locus_tag=AL55_RS15150;product=type I glutamate--ammonia ligase;protein_id=WP_003409401.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2109236 2110372 . + . ID=gene-AL55_RS15155;Name=AL55_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15155;old_locus_tag=AL55_01925 NZ_KK316828.1 Protein Homology CDS 2109236 2110372 . + 0 ID=cds-WP_003899061.1;Parent=gene-AL55_RS15155;Dbxref=GenBank:WP_003899061.1;Name=WP_003899061.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216395.1;locus_tag=AL55_RS15155;product=amidohydrolase family protein;protein_id=WP_003899061.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2110400 2111716 . - . ID=gene-AL55_RS15160;Name=AL55_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15160;old_locus_tag=AL55_01926 NZ_KK316828.1 Protein Homology CDS 2110400 2111716 . - 0 ID=cds-WP_003409406.1;Parent=gene-AL55_RS15160;Dbxref=GenBank:WP_003409406.1;Name=WP_003409406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216396.3;locus_tag=AL55_RS15160;product=cytochrome P450;protein_id=WP_003409406.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2111766 2112188 . - . ID=gene-AL55_RS15165;Name=lppE;gbkey=Gene;gene=lppE;gene_biotype=protein_coding;locus_tag=AL55_RS15165;old_locus_tag=AL55_01927 NZ_KK316828.1 Protein Homology CDS 2111766 2112188 . - 0 ID=cds-WP_003409409.1;Parent=gene-AL55_RS15165;Dbxref=GenBank:WP_003409409.1;Name=WP_003409409.1;gbkey=CDS;gene=lppE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216397.1;locus_tag=AL55_RS15165;product=lipoprotein LpqH;protein_id=WP_003409409.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2112229 2113062 . - . ID=gene-AL55_RS15170;Name=AL55_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15170;old_locus_tag=AL55_01928 NZ_KK316828.1 Protein Homology CDS 2112229 2113062 . - 0 ID=cds-WP_003409413.1;Parent=gene-AL55_RS15170;Dbxref=GenBank:WP_003409413.1;Name=WP_003409413.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216398.1;locus_tag=AL55_RS15170;product=SDR family oxidoreductase;protein_id=WP_003409413.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2113090 2113566 . - . ID=gene-AL55_RS15175;Name=AL55_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15175;old_locus_tag=AL55_01929 NZ_KK316828.1 Protein Homology CDS 2113090 2113566 . - 0 ID=cds-WP_003409417.1;Parent=gene-AL55_RS15175;Dbxref=GenBank:WP_003409417.1;Name=WP_003409417.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216399.1;locus_tag=AL55_RS15175;product=SRPBCC family protein;protein_id=WP_003409417.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2113605 2114135 . - . ID=gene-AL55_RS0104815;Name=rpfC;gbkey=Gene;gene=rpfC;gene_biotype=protein_coding;locus_tag=AL55_RS0104815;old_locus_tag=AL55_01930 NZ_KK316828.1 Protein Homology CDS 2113605 2114135 . - 0 ID=cds-WP_003409420.1;Parent=gene-AL55_RS0104815;Dbxref=GenBank:WP_003409420.1;Name=WP_003409420.1;Ontology_term=GO:0009372,GO:0042127,GO:0016787;gbkey=CDS;gene=rpfC;go_function=hydrolase activity|0016787||IEA;go_process=quorum sensing|0009372||IEA,regulation of cell population proliferation|0042127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216400.1;locus_tag=AL55_RS0104815;product=resuscitation-promoting factor RpfC;protein_id=WP_003409420.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2114147 2114746 . - . ID=gene-AL55_RS15180;Name=AL55_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15180;old_locus_tag=AL55_01931 NZ_KK316828.1 Protein Homology CDS 2114147 2114746 . - 0 ID=cds-WP_003899064.1;Parent=gene-AL55_RS15180;Dbxref=GenBank:WP_003899064.1;Name=WP_003899064.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216401.1;locus_tag=AL55_RS15180;product=chorismate mutase;protein_id=WP_003899064.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2114764 2115741 . - . ID=gene-AL55_RS15185;Name=ag85B;gbkey=Gene;gene=ag85B;gene_biotype=protein_coding;gene_synonym=fbpB;locus_tag=AL55_RS15185;old_locus_tag=AL55_01932 NZ_KK316828.1 Protein Homology CDS 2114764 2115741 . - 0 ID=cds-WP_003409456.1;Parent=gene-AL55_RS15185;Dbxref=GenBank:WP_003409456.1;Name=WP_003409456.1;gbkey=CDS;gene=ag85B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216402.1;locus_tag=AL55_RS15185;product=diacylglycerol acyltransferase/mycolyltransferase Ag85B;protein_id=WP_003409456.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2116132 2117274 . + . ID=gene-AL55_RS15190;Name=AL55_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15190;old_locus_tag=AL55_01933 NZ_KK316828.1 Protein Homology CDS 2116132 2117274 . + 0 ID=cds-WP_003899065.1;Parent=gene-AL55_RS15190;Dbxref=GenBank:WP_003899065.1;Name=WP_003899065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216403.1;locus_tag=AL55_RS15190;product=DUF7159 family protein;protein_id=WP_003899065.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2117244 2117963 . - . ID=gene-AL55_RS0104820;Name=AL55_RS0104820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104820;old_locus_tag=AL55_01934 NZ_KK316828.1 Protein Homology CDS 2117244 2117963 . - 0 ID=cds-WP_003409492.1;Parent=gene-AL55_RS0104820;Dbxref=GenBank:WP_003409492.1;Name=WP_003409492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409492.1;locus_tag=AL55_RS0104820;product=DUF4389 domain-containing protein;protein_id=WP_003409492.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2118058 2118901 . - . ID=gene-AL55_RS27470;Name=AL55_RS27470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27470;pseudo=true NZ_KK316828.1 Protein Homology CDS 2118058 2118901 . - 0 ID=cds-AL55_RS27470;Parent=gene-AL55_RS27470;Note=frameshifted;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020786876.1;locus_tag=AL55_RS27470;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2118960 2119511 . - . ID=gene-AL55_RS15195;Name=AL55_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15195;old_locus_tag=AL55_01937 NZ_KK316828.1 Protein Homology CDS 2118960 2119511 . - 0 ID=cds-WP_003911699.1;Parent=gene-AL55_RS15195;Dbxref=GenBank:WP_003911699.1;Name=WP_003911699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911699.1;locus_tag=AL55_RS15195;product=YceI family protein;protein_id=WP_003911699.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2119625 2120032 . + . ID=gene-AL55_RS15200;Name=AL55_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15200;old_locus_tag=AL55_01938 NZ_KK316828.1 Protein Homology CDS 2119625 2120032 . + 0 ID=cds-WP_003409509.1;Parent=gene-AL55_RS15200;Dbxref=GenBank:WP_003409509.1;Name=WP_003409509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216407.1;locus_tag=AL55_RS15200;product=hypothetical protein;protein_id=WP_003409509.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2120049 2120360 . + . ID=gene-AL55_RS15205;Name=AL55_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15205;old_locus_tag=AL55_01939 NZ_KK316828.1 Protein Homology CDS 2120049 2120360 . + 0 ID=cds-WP_003409512.1;Parent=gene-AL55_RS15205;Dbxref=GenBank:WP_003409512.1;Name=WP_003409512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216408.1;locus_tag=AL55_RS15205;product=hypothetical protein;protein_id=WP_003409512.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2120370 2120588 . + . ID=gene-AL55_RS15210;Name=AL55_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15210;old_locus_tag=AL55_01940 NZ_KK316828.1 Protein Homology CDS 2120370 2120588 . + 0 ID=cds-WP_003409515.1;Parent=gene-AL55_RS15210;Dbxref=GenBank:WP_003409515.1;Name=WP_003409515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216409.1;locus_tag=AL55_RS15210;product=Rv1893 family protein;protein_id=WP_003409515.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2120623 2121753 . - . ID=gene-AL55_RS15215;Name=AL55_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15215;old_locus_tag=AL55_01941 NZ_KK316828.1 Protein Homology CDS 2120623 2121753 . - 0 ID=cds-WP_003409518.1;Parent=gene-AL55_RS15215;Dbxref=GenBank:WP_003409518.1;Name=WP_003409518.1;Ontology_term=GO:0010181,GO:0018580;gbkey=CDS;go_function=FMN binding|0010181||IEA,nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216410.1;locus_tag=AL55_RS15215;product=nitronate monooxygenase;protein_id=WP_003409518.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2121801 2121974 . - . ID=gene-AL55_RS27290;Name=AL55_RS27290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27290 NZ_KK316828.1 Protein Homology CDS 2121801 2121974 . - 0 ID=cds-WP_015456321.1;Parent=gene-AL55_RS27290;Dbxref=GenBank:WP_015456321.1;Name=WP_015456321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015456321.1;locus_tag=AL55_RS27290;product=hypothetical protein;protein_id=WP_015456321.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2122405 2123367 . + . ID=gene-AL55_RS15220;Name=AL55_RS15220;end_range=2123367,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS15220;old_locus_tag=AL55_01942;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 2122405 2123367 . + 0 ID=cds-AL55_RS15220;Parent=gene-AL55_RS15220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2123367,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012335.6;locus_tag=AL55_RS15220;partial=true;product=alcohol dehydrogenase family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2123419 2124330 . - . ID=gene-AL55_RS15225;Name=AL55_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15225;old_locus_tag=AL55_01943 NZ_KK316828.1 Protein Homology CDS 2123419 2124330 . - 0 ID=cds-WP_003409526.1;Parent=gene-AL55_RS15225;Dbxref=GenBank:WP_003409526.1;Name=WP_003409526.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216412.1;locus_tag=AL55_RS15225;product=class I SAM-dependent methyltransferase;protein_id=WP_003409526.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2124335 2124766 . - . ID=gene-AL55_RS15230;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=AL55_RS15230;old_locus_tag=AL55_01944 NZ_KK316828.1 Protein Homology CDS 2124335 2124766 . - 0 ID=cds-WP_003409533.1;Parent=gene-AL55_RS15230;Dbxref=GenBank:WP_003409533.1;Name=WP_003409533.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216413.1;locus_tag=AL55_RS15230;product=D-aminoacyl-tRNA deacylase;protein_id=WP_003409533.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2124824 2125132 . + . ID=gene-AL55_RS15235;Name=AL55_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15235;old_locus_tag=AL55_01945 NZ_KK316828.1 Protein Homology CDS 2124824 2125132 . + 0 ID=cds-WP_003409536.1;Parent=gene-AL55_RS15235;Dbxref=GenBank:WP_003409536.1;Name=WP_003409536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216414.1;locus_tag=AL55_RS15235;product=MTH1187 family thiamine-binding protein;protein_id=WP_003409536.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2125098 2125613 . - . ID=gene-AL55_RS27295;Name=AL55_RS27295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27295;old_locus_tag=AL55_01946 NZ_KK316828.1 Protein Homology CDS 2125098 2125613 . - 0 ID=cds-WP_003409537.1;Parent=gene-AL55_RS27295;Dbxref=GenBank:WP_003409537.1;Name=WP_003409537.1;Ontology_term=GO:0072570;gbkey=CDS;go_function=ADP-D-ribose binding|0072570||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303272.1;locus_tag=AL55_RS27295;product=macro domain-containing protein;protein_id=WP_003409537.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2125854 2126177 . + . ID=gene-AL55_RS27300;Name=AL55_RS27300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27300 NZ_KK316828.1 GeneMarkS-2+ CDS 2125854 2126177 . + 0 ID=cds-WP_128882532.1;Parent=gene-AL55_RS27300;Dbxref=GenBank:WP_128882532.1;Name=WP_128882532.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS27300;product=hypothetical protein;protein_id=WP_128882532.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2126174 2127562 . - . ID=gene-AL55_RS15245;Name=lipJ;gbkey=Gene;gene=lipJ;gene_biotype=protein_coding;locus_tag=AL55_RS15245;old_locus_tag=AL55_01947 NZ_KK316828.1 Protein Homology CDS 2126174 2127562 . - 0 ID=cds-WP_003409539.1;Parent=gene-AL55_RS15245;Dbxref=GenBank:WP_003409539.1;Name=WP_003409539.1;Ontology_term=GO:0009190,GO:0035556,GO:0009975,GO:0016849,GO:0032555,GO:0046872;gbkey=CDS;gene=lipJ;go_function=cyclase activity|0009975||IEA,phosphorus-oxygen lyase activity|0016849||IEA,purine ribonucleotide binding|0032555||IEA,metal ion binding|0046872||IEA;go_process=cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216416.1;locus_tag=AL55_RS15245;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003409539.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2127591 2128883 . + . ID=gene-AL55_RS15250;Name=cinA;gbkey=Gene;gene=cinA;gene_biotype=protein_coding;locus_tag=AL55_RS15250;old_locus_tag=AL55_01948 NZ_KK316828.1 Protein Homology CDS 2127591 2128883 . + 0 ID=cds-WP_003900426.1;Parent=gene-AL55_RS15250;Dbxref=GenBank:WP_003900426.1;Name=WP_003900426.1;gbkey=CDS;gene=cinA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216417.1;locus_tag=AL55_RS15250;product=competence/damage-inducible protein A;protein_id=WP_003900426.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2128935 2130203 . - . ID=gene-AL55_RS15255;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=AL55_RS15255;old_locus_tag=AL55_01949 NZ_KK316828.1 Protein Homology CDS 2128935 2130203 . - 0 ID=cds-WP_003900427.1;Parent=gene-AL55_RS15255;Dbxref=GenBank:WP_003900427.1;Name=WP_003900427.1;Ontology_term=GO:0015718,GO:0008028,GO:0005886;gbkey=CDS;gene=nanT;go_component=plasma membrane|0005886||IEA;go_function=monocarboxylic acid transmembrane transporter activity|0008028||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216418.1;locus_tag=AL55_RS15255;product=sialate:H+ symport family MFS transporter;protein_id=WP_003900427.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2130293 2130697 . + . ID=gene-AL55_RS15260;Name=AL55_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15260;old_locus_tag=AL55_01950 NZ_KK316828.1 Protein Homology CDS 2130293 2130697 . + 0 ID=cds-WP_003409542.1;Parent=gene-AL55_RS15260;Dbxref=GenBank:WP_003409542.1;Name=WP_003409542.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216419.1;locus_tag=AL55_RS15260;product=phage holin family protein;protein_id=WP_003409542.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2130883 2131314 . + . ID=gene-AL55_RS15265;Name=AL55_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15265;old_locus_tag=AL55_01951 NZ_KK316828.1 Protein Homology CDS 2130883 2131314 . + 0 ID=cds-WP_003905679.1;Parent=gene-AL55_RS15265;Dbxref=GenBank:WP_003905679.1;Name=WP_003905679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216420.1;locus_tag=AL55_RS15265;product=anti-sigma factor antagonist;protein_id=WP_003905679.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2131362 2132324 . - . ID=gene-AL55_RS15270;Name=aao;gbkey=Gene;gene=aao;gene_biotype=protein_coding;locus_tag=AL55_RS15270;old_locus_tag=AL55_01952 NZ_KK316828.1 Protein Homology CDS 2131362 2132324 . - 0 ID=cds-WP_003899072.1;Parent=gene-AL55_RS15270;Dbxref=GenBank:WP_003899072.1;Name=WP_003899072.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=aao;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216421.1;locus_tag=AL55_RS15270;product=FAD-dependent oxidoreductase;protein_id=WP_003899072.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2132354 2132824 . - . ID=gene-AL55_RS15275;Name=AL55_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15275;old_locus_tag=AL55_01953 NZ_KK316828.1 Protein Homology CDS 2132354 2132824 . - 0 ID=cds-WP_003900428.1;Parent=gene-AL55_RS15275;Dbxref=GenBank:WP_003900428.1;Name=WP_003900428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216422.1;locus_tag=AL55_RS15275;product=hypothetical protein;protein_id=WP_003900428.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2133164 2133628 . - . ID=gene-AL55_RS15280;Name=AL55_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15280;old_locus_tag=AL55_01954 NZ_KK316828.1 Protein Homology CDS 2133164 2133628 . - 0 ID=cds-WP_014585239.1;Parent=gene-AL55_RS15280;Dbxref=GenBank:WP_014585239.1;Name=WP_014585239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585239.1;locus_tag=AL55_RS15280;product=DUF4262 domain-containing protein;protein_id=WP_014585239.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2133804 2136026 . - . ID=gene-AL55_RS15285;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=AL55_RS15285;old_locus_tag=AL55_01955 NZ_KK316828.1 Protein Homology CDS 2133804 2136026 . - 0 ID=cds-WP_003901285.1;Parent=gene-AL55_RS15285;Dbxref=GenBank:WP_003901285.1;Name=WP_003901285.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216424.1;locus_tag=AL55_RS15285;product=catalase/peroxidase HPI;protein_id=WP_003901285.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2136064 2136507 . - . ID=gene-AL55_RS15290;Name=furA;gbkey=Gene;gene=furA;gene_biotype=protein_coding;locus_tag=AL55_RS15290;old_locus_tag=AL55_01956 NZ_KK316828.1 Protein Homology CDS 2136064 2136507 . - 0 ID=cds-WP_003899076.1;Parent=gene-AL55_RS15290;Dbxref=GenBank:WP_003899076.1;Name=WP_003899076.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;gene=furA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216425.2;locus_tag=AL55_RS15290;product=Fur family transcriptional regulator;protein_id=WP_003899076.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2136621 2137214 . - . ID=gene-AL55_RS15295;Name=AL55_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15295;old_locus_tag=AL55_01957 NZ_KK316828.1 Protein Homology CDS 2136621 2137214 . - 0 ID=cds-WP_003409566.1;Parent=gene-AL55_RS15295;Dbxref=GenBank:WP_003409566.1;Name=WP_003409566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216426.1;locus_tag=AL55_RS15295;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_003409566.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2137297 2137902 . - . ID=gene-AL55_RS15300;Name=lppC;gbkey=Gene;gene=lppC;gene_biotype=protein_coding;locus_tag=AL55_RS15300;old_locus_tag=AL55_01958 NZ_KK316828.1 Protein Homology CDS 2137297 2137902 . - 0 ID=cds-WP_049955301.1;Parent=gene-AL55_RS15300;Dbxref=GenBank:WP_049955301.1;Name=WP_049955301.1;gbkey=CDS;gene=lppC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216427.1;locus_tag=AL55_RS15300;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_049955301.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2138002 2139006 . - . ID=gene-AL55_RS15305;Name=AL55_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15305;old_locus_tag=AL55_01959 NZ_KK316828.1 Protein Homology CDS 2138002 2139006 . - 0 ID=cds-WP_003409570.1;Parent=gene-AL55_RS15305;Dbxref=GenBank:WP_003409570.1;Name=WP_003409570.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216428.1;locus_tag=AL55_RS15305;product=synaptic vesicle VAT-1 family membrane protein;protein_id=WP_003409570.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2139106 2139858 . + . ID=gene-AL55_RS15310;Name=AL55_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15310;old_locus_tag=AL55_01960 NZ_KK316828.1 Protein Homology CDS 2139106 2139858 . + 0 ID=cds-WP_003409574.1;Parent=gene-AL55_RS15310;Dbxref=GenBank:WP_003409574.1;Name=WP_003409574.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216429.1;locus_tag=AL55_RS15310;product=MBL fold metallo-hydrolase;protein_id=WP_003409574.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2139836 2140243 . - . ID=gene-AL55_RS15315;Name=AL55_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15315;old_locus_tag=AL55_01961 NZ_KK316828.1 Protein Homology CDS 2139836 2140243 . - 0 ID=cds-WP_003409577.1;Parent=gene-AL55_RS15315;Dbxref=GenBank:WP_003409577.1;Name=WP_003409577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216430.1;locus_tag=AL55_RS15315;product=hypothetical protein;protein_id=WP_003409577.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2140378 2142678 . + . ID=gene-AL55_RS0104850;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AL55_RS0104850 NZ_KK316828.1 Protein Homology CDS 2140378 2142678 . + 0 ID=cds-WP_003409584.1;Parent=gene-AL55_RS0104850;Dbxref=GenBank:WP_003409584.1;Name=WP_003409584.1;gbkey=CDS;gene=aceA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409584.1;locus_tag=AL55_RS0104850;product=isocitrate lyase ICL2;protein_id=WP_003409584.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2142848 2145280 . - . ID=gene-AL55_RS15320;Name=AL55_RS15320;end_range=2145280,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15320;old_locus_tag=AL55_01964;partial=true NZ_KK316828.1 Protein Homology CDS 2142848 2145280 . - 0 ID=cds-WP_031721700.1;Parent=gene-AL55_RS15320;Dbxref=GenBank:WP_031721700.1;Name=WP_031721700.1;end_range=2145280,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177655.1;locus_tag=AL55_RS15320;partial=true;product=beta strand repeat-containing protein;protein_id=WP_031721700.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2147142 2148658 . - . ID=gene-AL55_RS0104855;Name=AL55_RS0104855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104855;partial=true;start_range=.,2147142 NZ_KK316828.1 Protein Homology CDS 2147142 2148658 . - 0 ID=cds-WP_031720845.1;Parent=gene-AL55_RS0104855;Dbxref=GenBank:WP_031720845.1;Name=WP_031720845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293293.1;locus_tag=AL55_RS0104855;partial=true;product=PPE family protein;protein_id=WP_031720845.1;start_range=.,2147142;transl_table=11 NZ_KK316828.1 RefSeq gene 2148996 2151959 . - . ID=gene-AL55_RS15325;Name=AL55_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15325;old_locus_tag=AL55_01965 NZ_KK316828.1 Protein Homology CDS 2148996 2151959 . - 0 ID=cds-WP_003902179.1;Parent=gene-AL55_RS15325;Dbxref=GenBank:WP_003902179.1;Name=WP_003902179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177850.1;locus_tag=AL55_RS15325;product=PPE family protein;protein_id=WP_003902179.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2152408 2152872 . - . ID=gene-AL55_RS15330;Name=AL55_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15330;old_locus_tag=AL55_01966 NZ_KK316828.1 Protein Homology CDS 2152408 2152872 . - 0 ID=cds-WP_003899082.1;Parent=gene-AL55_RS15330;Dbxref=GenBank:WP_003899082.1;Name=WP_003899082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216435.1;locus_tag=AL55_RS15330;product=SRPBCC family protein;protein_id=WP_003899082.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2152970 2153833 . + . ID=gene-AL55_RS15335;Name=AL55_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15335;old_locus_tag=AL55_01967 NZ_KK316828.1 Protein Homology CDS 2152970 2153833 . + 0 ID=cds-WP_003901288.1;Parent=gene-AL55_RS15335;Dbxref=GenBank:WP_003901288.1;Name=WP_003901288.1;Ontology_term=GO:0006644,GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid metabolic process|0006644||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216436.1;locus_tag=AL55_RS15335;product=lysophospholipid acyltransferase family protein;protein_id=WP_003901288.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2153871 2155142 . - . ID=gene-AL55_RS15340;Name=lppF;gbkey=Gene;gene=lppF;gene_biotype=protein_coding;locus_tag=AL55_RS15340;old_locus_tag=AL55_01968 NZ_KK316828.1 Protein Homology CDS 2153871 2155142 . - 0 ID=cds-WP_003409666.1;Parent=gene-AL55_RS15340;Dbxref=GenBank:WP_003409666.1;Name=WP_003409666.1;gbkey=CDS;gene=lppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216437.1;locus_tag=AL55_RS15340;product=haloacid dehalogenase-like hydrolase;protein_id=WP_003409666.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2155414 2156529 . + . ID=gene-AL55_RS15345;Name=AL55_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15345;old_locus_tag=AL55_01969 NZ_KK316828.1 Protein Homology CDS 2155414 2156529 . + 0 ID=cds-WP_003409667.1;Parent=gene-AL55_RS15345;Dbxref=GenBank:WP_003409667.1;Name=WP_003409667.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216438.1;locus_tag=AL55_RS15345;product=serine hydrolase domain-containing protein;protein_id=WP_003409667.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2156580 2157860 . + . ID=gene-AL55_RS15350;Name=lipD;gbkey=Gene;gene=lipD;gene_biotype=protein_coding;locus_tag=AL55_RS15350;old_locus_tag=AL55_01970 NZ_KK316828.1 Protein Homology CDS 2156580 2157860 . + 0 ID=cds-WP_003911710.1;Parent=gene-AL55_RS15350;Dbxref=GenBank:WP_003911710.1;Name=WP_003911710.1;gbkey=CDS;gene=lipD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911710.1;locus_tag=AL55_RS15350;product=lipase LipD;protein_id=WP_003911710.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2157897 2158277 . - . ID=gene-AL55_RS15355;Name=AL55_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15355;old_locus_tag=AL55_01971 NZ_KK316828.1 Protein Homology CDS 2157897 2158277 . - 0 ID=cds-WP_003900434.1;Parent=gene-AL55_RS15355;Dbxref=GenBank:WP_003900434.1;Name=WP_003900434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216440.1;locus_tag=AL55_RS15355;product=hypothetical protein;protein_id=WP_003900434.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2158434 2160296 . + . ID=gene-AL55_RS15360;Name=fadD31;gbkey=Gene;gene=fadD31;gene_biotype=protein_coding;gene_synonym=faaL31;locus_tag=AL55_RS15360;old_locus_tag=AL55_01972 NZ_KK316828.1 Protein Homology CDS 2158434 2160296 . + 0 ID=cds-WP_003902177.1;Parent=gene-AL55_RS15360;Dbxref=GenBank:WP_003902177.1;Name=WP_003902177.1;gbkey=CDS;gene=fadD31;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216441.2;locus_tag=AL55_RS15360;product=fatty-acid--AMP ligase FAAL31/FadD31;protein_id=WP_003902177.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2160304 2160783 . - . ID=gene-AL55_RS15365;Name=mpt63;gbkey=Gene;gene=mpt63;gene_biotype=protein_coding;locus_tag=AL55_RS15365;old_locus_tag=AL55_01973 NZ_KK316828.1 Protein Homology CDS 2160304 2160783 . - 0 ID=cds-WP_003409684.1;Parent=gene-AL55_RS15365;Dbxref=GenBank:WP_003409684.1;Name=WP_003409684.1;gbkey=CDS;gene=mpt63;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216442.1;locus_tag=AL55_RS15365;product=immunoprotective protein Mpt63;protein_id=WP_003409684.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2161020 2161793 . + . ID=gene-AL55_RS15370;Name=AL55_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15370;old_locus_tag=AL55_01974 NZ_KK316828.1 Protein Homology CDS 2161020 2161793 . + 0 ID=cds-WP_003905688.1;Parent=gene-AL55_RS15370;Dbxref=GenBank:WP_003905688.1;Name=WP_003905688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216443.1;locus_tag=AL55_RS15370;product=YqjF family protein;protein_id=WP_003905688.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2161797 2162411 . - . ID=gene-AL55_RS15375;Name=AL55_RS15375;end_range=2162411,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS15375;old_locus_tag=AL55_01975;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 2161797 2162411 . - 0 ID=cds-AL55_RS15375;Parent=gene-AL55_RS15375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2162411,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216444.1;locus_tag=AL55_RS15375;partial=true;product=SDR family oxidoreductase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2162446 2163707 . - . ID=gene-AL55_RS15380;Name=AL55_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15380;old_locus_tag=AL55_01976 NZ_KK316828.1 Protein Homology CDS 2163419 2163707 . - 0 ID=cds-WP_087902221.1-6;Parent=gene-AL55_RS15380;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS15380;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 2162446 2163419 . - 2 ID=cds-WP_087902221.1-6;Parent=gene-AL55_RS15380;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS15380;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2163758 2163922 . - . ID=gene-AL55_RS26035;Name=AL55_RS26035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS26035;partial=true;pseudo=true;start_range=.,2163758 NZ_KK316828.1 Protein Homology CDS 2163758 2163922 . - 0 ID=cds-AL55_RS26035;Parent=gene-AL55_RS26035;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216444.1;locus_tag=AL55_RS26035;partial=true;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;start_range=.,2163758;transl_table=11 NZ_KK316828.1 RefSeq gene 2163967 2164611 . - . ID=gene-AL55_RS15390;Name=AL55_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15390;old_locus_tag=AL55_01978 NZ_KK316828.1 Protein Homology CDS 2163967 2164611 . - 0 ID=cds-WP_003409689.1;Parent=gene-AL55_RS15390;Dbxref=GenBank:WP_003409689.1;Name=WP_003409689.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216445.1;locus_tag=AL55_RS15390;product=TIGR03085 family metal-binding protein;protein_id=WP_003409689.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2164623 2165147 . - . ID=gene-AL55_RS15395;Name=AL55_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15395;old_locus_tag=AL55_01979 NZ_KK316828.1 Protein Homology CDS 2164623 2165147 . - 0 ID=cds-WP_003409694.1;Parent=gene-AL55_RS15395;Dbxref=GenBank:WP_003409694.1;Name=WP_003409694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216446.1;locus_tag=AL55_RS15395;product=type 1 glutamine amidotransferase family protein;protein_id=WP_003409694.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2165165 2165944 . - . ID=gene-AL55_RS15400;Name=AL55_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15400;old_locus_tag=AL55_01980 NZ_KK316828.1 Protein Homology CDS 2165165 2165944 . - 0 ID=cds-WP_003899087.1;Parent=gene-AL55_RS15400;Dbxref=GenBank:WP_003899087.1;Name=WP_003899087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899087.1;locus_tag=AL55_RS15400;product=HTH-type transcriptional regulator;protein_id=WP_003899087.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2166077 2166574 . + . ID=gene-AL55_RS15405;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AL55_RS15405;old_locus_tag=AL55_01981 NZ_KK316828.1 Protein Homology CDS 2166077 2166574 . + 0 ID=cds-WP_003409700.1;Parent=gene-AL55_RS15405;Dbxref=GenBank:WP_003409700.1;Name=WP_003409700.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216448.1;locus_tag=AL55_RS15405;product=thiol peroxidase;protein_id=WP_003409700.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2166571 2167662 . - . ID=gene-AL55_RS15410;Name=AL55_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15410;old_locus_tag=AL55_01982 NZ_KK316828.1 Protein Homology CDS 2166571 2167662 . - 0 ID=cds-WP_003900437.1;Parent=gene-AL55_RS15410;Dbxref=GenBank:WP_003900437.1;Name=WP_003900437.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216449.1;locus_tag=AL55_RS15410;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003900437.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2167664 2168893 . - . ID=gene-AL55_RS15415;Name=AL55_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15415;old_locus_tag=AL55_01983 NZ_KK316828.1 Protein Homology CDS 2167664 2168893 . - 0 ID=cds-WP_009940625.1;Parent=gene-AL55_RS15415;Dbxref=GenBank:WP_009940625.1;Name=WP_009940625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216450.1;locus_tag=AL55_RS15415;product=acyl-CoA dehydrogenase;protein_id=WP_009940625.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2168908 2169864 . - . ID=gene-AL55_RS15420;Name=AL55_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15420;old_locus_tag=AL55_01984 NZ_KK316828.1 Protein Homology CDS 2168908 2169864 . - 0 ID=cds-WP_003409707.1;Parent=gene-AL55_RS15420;Dbxref=GenBank:WP_003409707.1;Name=WP_003409707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216451.1;locus_tag=AL55_RS15420;product=enoyl-CoA hydratase;protein_id=WP_003409707.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2170089 2171198 . + . ID=gene-AL55_RS15425;Name=AL55_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15425;old_locus_tag=AL55_01985 NZ_KK316828.1 Protein Homology CDS 2170089 2171198 . + 0 ID=cds-WP_003901293.1;Parent=gene-AL55_RS15425;Dbxref=GenBank:WP_003901293.1;Name=WP_003901293.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216452.1;locus_tag=AL55_RS15425;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_003901293.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2171201 2173720 . + . ID=gene-AL55_RS15430;Name=AL55_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15430;old_locus_tag=AL55_01986 NZ_KK316828.1 Protein Homology CDS 2171201 2173720 . + 0 ID=cds-WP_003409714.1;Parent=gene-AL55_RS15430;Dbxref=GenBank:WP_003409714.1;Name=WP_003409714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216453.1;locus_tag=AL55_RS15430;product=FAD-binding oxidoreductase;protein_id=WP_003409714.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2173732 2174802 . + . ID=gene-AL55_RS15435;Name=ephB;gbkey=Gene;gene=ephB;gene_biotype=protein_coding;locus_tag=AL55_RS15435;old_locus_tag=AL55_01987 NZ_KK316828.1 Protein Homology CDS 2173732 2174802 . + 0 ID=cds-WP_003902252.1;Parent=gene-AL55_RS15435;Dbxref=GenBank:WP_003902252.1;Name=WP_003902252.1;gbkey=CDS;gene=ephB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216454.1;locus_tag=AL55_RS15435;product=epoxide hydrolase EphB;protein_id=WP_003902252.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2174799 2175314 . + . ID=gene-AL55_RS15440;Name=AL55_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15440;old_locus_tag=AL55_01988 NZ_KK316828.1 Protein Homology CDS 2174799 2175314 . + 0 ID=cds-WP_003409718.1;Parent=gene-AL55_RS15440;Dbxref=GenBank:WP_003409718.1;Name=WP_003409718.1;Ontology_term=GO:0010181,GO:0016491,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216455.1;locus_tag=AL55_RS15440;product=flavin reductase family protein;protein_id=WP_003409718.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2175311 2176372 . + . ID=gene-AL55_RS15445;Name=AL55_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15445;old_locus_tag=AL55_01989 NZ_KK316828.1 Protein Homology CDS 2175311 2176372 . + 0 ID=cds-WP_003899092.1;Parent=gene-AL55_RS15445;Dbxref=GenBank:WP_003899092.1;Name=WP_003899092.1;Ontology_term=GO:0008686;gbkey=CDS;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177851.1;locus_tag=AL55_RS15445;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_003899092.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2176369 2177139 . + . ID=gene-AL55_RS15450;Name=AL55_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15450;old_locus_tag=AL55_01990 NZ_KK316828.1 Protein Homology CDS 2176369 2177139 . + 0 ID=cds-WP_003409775.1;Parent=gene-AL55_RS15450;Dbxref=GenBank:WP_003409775.1;Name=WP_003409775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216457.1;locus_tag=AL55_RS15450;product=SDR family oxidoreductase;protein_id=WP_003409775.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2177349 2177678 . - . ID=gene-AL55_RS15455;Name=AL55_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15455;old_locus_tag=AL55_01991 NZ_KK316828.1 Protein Homology CDS 2177349 2177678 . - 0 ID=cds-WP_003409778.1;Parent=gene-AL55_RS15455;Dbxref=GenBank:WP_003409778.1;Name=WP_003409778.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216458.1;locus_tag=AL55_RS15455;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_003409778.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2177675 2178052 . - . ID=gene-AL55_RS26045;Name=mazE5;gbkey=Gene;gene=mazE5;gene_biotype=protein_coding;locus_tag=AL55_RS26045;old_locus_tag=AL55_01992 NZ_KK316828.1 Protein Homology CDS 2177675 2178052 . - 0 ID=cds-WP_003409780.1;Parent=gene-AL55_RS26045;Dbxref=GenBank:WP_003409780.1;Name=WP_003409780.1;gbkey=CDS;gene=mazE5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216459.1;locus_tag=AL55_RS26045;product=type II toxin-antitoxin system antitoxin MazE5;protein_id=WP_003409780.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2178049 2178639 . - . ID=gene-AL55_RS15460;Name=AL55_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15460;old_locus_tag=AL55_01993 NZ_KK316828.1 Protein Homology CDS 2178049 2178639 . - 0 ID=cds-WP_003409784.1;Parent=gene-AL55_RS15460;Dbxref=GenBank:WP_003409784.1;Name=WP_003409784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216460.1;locus_tag=AL55_RS15460;product=SEC-C domain-containing protein;protein_id=WP_003409784.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2178694 2180058 . + . ID=gene-AL55_RS15465;Name=AL55_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15465;old_locus_tag=AL55_01994 NZ_KK316828.1 Protein Homology CDS 2178694 2180058 . + 0 ID=cds-WP_003903691.1;Parent=gene-AL55_RS15465;Dbxref=GenBank:WP_003903691.1;Name=WP_003903691.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216461.1;locus_tag=AL55_RS15465;product=HNH endonuclease signature motif containing protein;protein_id=WP_003903691.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2180213 2180665 . - . ID=gene-AL55_RS15470;Name=lppG;gbkey=Gene;gene=lppG;gene_biotype=protein_coding;locus_tag=AL55_RS15470;old_locus_tag=AL55_01995 NZ_KK316828.1 Protein Homology CDS 2180213 2180665 . - 0 ID=cds-WP_003899095.1;Parent=gene-AL55_RS15470;Dbxref=GenBank:WP_003899095.1;Name=WP_003899095.1;gbkey=CDS;gene=lppG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216462.1;locus_tag=AL55_RS15470;product=lipoprotein;protein_id=WP_003899095.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2180729 2181130 . + . ID=gene-AL55_RS15475;Name=AL55_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15475;old_locus_tag=AL55_01996 NZ_KK316828.1 Protein Homology CDS 2180729 2181130 . + 0 ID=cds-WP_003409869.1;Parent=gene-AL55_RS15475;Dbxref=GenBank:WP_003409869.1;Name=WP_003409869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216463.1;locus_tag=AL55_RS15475;product=hypothetical protein;protein_id=WP_003409869.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2181123 2181305 . - . ID=gene-AL55_RS0104870;Name=AL55_RS0104870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104870 NZ_KK316828.1 Protein Homology CDS 2181123 2181305 . - 0 ID=cds-WP_003409870.1;Parent=gene-AL55_RS0104870;Dbxref=GenBank:WP_003409870.1;Name=WP_003409870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409870.1;locus_tag=AL55_RS0104870;product=hypothetical protein;protein_id=WP_003409870.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2181419 2181769 . - . ID=gene-AL55_RS15480;Name=AL55_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15480;old_locus_tag=AL55_01997 NZ_KK316828.1 Protein Homology CDS 2181419 2181769 . - 0 ID=cds-WP_003409871.1;Parent=gene-AL55_RS15480;Dbxref=GenBank:WP_003409871.1;Name=WP_003409871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216464.1;locus_tag=AL55_RS15480;product=hypothetical protein;protein_id=WP_003409871.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2181780 2182682 . - . ID=gene-AL55_RS15485;Name=AL55_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15485;old_locus_tag=AL55_01998 NZ_KK316828.1 Protein Homology CDS 2181780 2182682 . - 0 ID=cds-WP_003899097.1;Parent=gene-AL55_RS15485;Dbxref=GenBank:WP_003899097.1;Name=WP_003899097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409874.1;locus_tag=AL55_RS15485;product=hypothetical protein;protein_id=WP_003899097.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2182703 2182894 . - . ID=gene-AL55_RS15490;Name=AL55_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15490;old_locus_tag=AL55_01999 NZ_KK316828.1 Protein Homology CDS 2182703 2182894 . - 0 ID=cds-WP_003409876.1;Parent=gene-AL55_RS15490;Dbxref=GenBank:WP_003409876.1;Name=WP_003409876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216466.1;locus_tag=AL55_RS15490;product=hypothetical protein;protein_id=WP_003409876.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2182895 2183191 . - . ID=gene-AL55_RS15495;Name=AL55_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15495;old_locus_tag=AL55_02000 NZ_KK316828.1 Protein Homology CDS 2182895 2183191 . - 0 ID=cds-WP_003409877.1;Parent=gene-AL55_RS15495;Dbxref=GenBank:WP_003409877.1;Name=WP_003409877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216467.1;locus_tag=AL55_RS15495;product=hypothetical protein;protein_id=WP_003409877.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2183431 2183646 . + . ID=gene-AL55_RS15500;Name=AL55_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15500;old_locus_tag=AL55_02001 NZ_KK316828.1 Protein Homology CDS 2183431 2183646 . + 0 ID=cds-WP_003409878.1;Parent=gene-AL55_RS15500;Dbxref=GenBank:WP_003409878.1;Name=WP_003409878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216468.1;locus_tag=AL55_RS15500;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_003409878.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2183643 2183954 . + . ID=gene-AL55_RS15505;Name=AL55_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15505;old_locus_tag=AL55_02002 NZ_KK316828.1 GeneMarkS-2+ CDS 2183643 2183954 . + 0 ID=cds-WP_003409881.1;Parent=gene-AL55_RS15505;Dbxref=GenBank:WP_003409881.1;Name=WP_003409881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS15505;product=PIN domain-containing protein;protein_id=WP_003409881.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2183928 2184449 . - . ID=gene-AL55_RS27305;Name=AL55_RS27305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27305;old_locus_tag=AL55_02003 NZ_KK316828.1 Protein Homology CDS 2183928 2184449 . - 0 ID=cds-WP_003904745.1;Parent=gene-AL55_RS27305;Dbxref=GenBank:WP_003904745.1;Name=WP_003904745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216470.1;locus_tag=AL55_RS27305;product=hypothetical protein;protein_id=WP_003904745.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2184424 2184801 . + . ID=gene-AL55_RS15510;Name=higB;gbkey=Gene;gene=higB;gene_biotype=protein_coding;locus_tag=AL55_RS15510;old_locus_tag=AL55_02005 NZ_KK316828.1 Protein Homology CDS 2184424 2184801 . + 0 ID=cds-WP_010886136.1;Parent=gene-AL55_RS15510;Dbxref=GenBank:WP_010886136.1;Name=WP_010886136.1;gbkey=CDS;gene=higB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216471.2;locus_tag=AL55_RS15510;product=type II toxin-antitoxin system toxin HigB;protein_id=WP_010886136.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2184843 2185292 . + . ID=gene-AL55_RS15515;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=AL55_RS15515;old_locus_tag=AL55_02006 NZ_KK316828.1 Protein Homology CDS 2184843 2185292 . + 0 ID=cds-WP_003409886.1;Parent=gene-AL55_RS15515;Dbxref=GenBank:WP_003409886.1;Name=WP_003409886.1;gbkey=CDS;gene=higA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216472.1;locus_tag=AL55_RS15515;product=type II toxin-antitoxin system antitoxin HigA;protein_id=WP_003409886.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2185289 2185834 . + . ID=gene-AL55_RS15520;Name=AL55_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15520;old_locus_tag=AL55_02007 NZ_KK316828.1 Protein Homology CDS 2185289 2185834 . + 0 ID=cds-WP_003409891.1;Parent=gene-AL55_RS15520;Dbxref=GenBank:WP_003409891.1;Name=WP_003409891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216473.1;locus_tag=AL55_RS15520;product=SecB-like chaperone SecBL;protein_id=WP_003409891.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2185723 2186337 . - . ID=gene-AL55_RS15525;Name=AL55_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15525;old_locus_tag=AL55_02008 NZ_KK316828.1 Protein Homology CDS 2185723 2186337 . - 0 ID=cds-WP_003901296.1;Parent=gene-AL55_RS15525;Dbxref=GenBank:WP_003901296.1;Name=WP_003901296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216474.1;locus_tag=AL55_RS15525;product=hypothetical protein;protein_id=WP_003901296.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2186386 2186682 . - . ID=gene-AL55_RS15530;Name=AL55_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15530;old_locus_tag=AL55_02009 NZ_KK316828.1 Protein Homology CDS 2186386 2186682 . - 0 ID=cds-WP_003409896.1;Parent=gene-AL55_RS15530;Dbxref=GenBank:WP_003409896.1;Name=WP_003409896.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216475.1;locus_tag=AL55_RS15530;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003409896.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2186679 2186930 . - . ID=gene-AL55_RS15535;Name=AL55_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15535;old_locus_tag=AL55_02010 NZ_KK316828.1 Protein Homology CDS 2186679 2186930 . - 0 ID=cds-WP_003409899.1;Parent=gene-AL55_RS15535;Dbxref=GenBank:WP_003409899.1;Name=WP_003409899.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216476.1;locus_tag=AL55_RS15535;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_003409899.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2186917 2187411 . + . ID=gene-AL55_RS15540;Name=AL55_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15540;old_locus_tag=AL55_02011 NZ_KK316828.1 Protein Homology CDS 2186917 2187411 . + 0 ID=cds-WP_003899099.1;Parent=gene-AL55_RS15540;Dbxref=GenBank:WP_003899099.1;Name=WP_003899099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216477.1;locus_tag=AL55_RS15540;product=hypothetical protein;protein_id=WP_003899099.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2187571 2187978 . - . ID=gene-AL55_RS15545;Name=AL55_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15545;old_locus_tag=AL55_02012 NZ_KK316828.1 Protein Homology CDS 2187571 2187978 . - 0 ID=cds-WP_003409913.1;Parent=gene-AL55_RS15545;Dbxref=GenBank:WP_003409913.1;Name=WP_003409913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216478.1;locus_tag=AL55_RS15545;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003409913.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2187982 2188254 . - . ID=gene-AL55_RS15550;Name=AL55_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15550;old_locus_tag=AL55_02013 NZ_KK316828.1 Protein Homology CDS 2187982 2188254 . - 0 ID=cds-WP_003899100.1;Parent=gene-AL55_RS15550;Dbxref=GenBank:WP_003899100.1;Name=WP_003899100.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410641.1;locus_tag=AL55_RS15550;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003899100.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2188287 2189507 . - . ID=gene-AL55_RS15555;Name=mce3R;gbkey=Gene;gene=mce3R;gene_biotype=protein_coding;locus_tag=AL55_RS15555;old_locus_tag=AL55_02014 NZ_KK316828.1 Protein Homology CDS 2188287 2189507 . - 0 ID=cds-WP_003409919.1;Parent=gene-AL55_RS15555;Dbxref=GenBank:WP_003409919.1;Name=WP_003409919.1;gbkey=CDS;gene=mce3R;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216479.1;locus_tag=AL55_RS15555;product=TetR family transcriptional regulator Mce3R;protein_id=WP_003409919.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2190406 2191203 . + . ID=gene-AL55_RS15560;Name=AL55_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15560;old_locus_tag=AL55_02015 NZ_KK316828.1 Protein Homology CDS 2190406 2191203 . + 0 ID=cds-WP_003899101.1;Parent=gene-AL55_RS15560;Dbxref=GenBank:WP_003899101.1;Name=WP_003899101.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216480.1;locus_tag=AL55_RS15560;product=MlaE family ABC transporter permease;protein_id=WP_003899101.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2191213 2192028 . + . ID=gene-AL55_RS15565;Name=AL55_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15565;old_locus_tag=AL55_02016 NZ_KK316828.1 Protein Homology CDS 2191213 2192028 . + 0 ID=cds-WP_003899102.1;Parent=gene-AL55_RS15565;Dbxref=GenBank:WP_003899102.1;Name=WP_003899102.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216481.1;locus_tag=AL55_RS15565;product=ABC transporter permease;protein_id=WP_003899102.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2192033 2193310 . + . ID=gene-AL55_RS15570;Name=AL55_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15570;old_locus_tag=AL55_02017 NZ_KK316828.1 Protein Homology CDS 2192033 2193310 . + 0 ID=cds-WP_003901299.1;Parent=gene-AL55_RS15570;Dbxref=GenBank:WP_003901299.1;Name=WP_003901299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177852.1;locus_tag=AL55_RS15570;product=MCE family protein;protein_id=WP_003901299.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2193307 2194335 . + . ID=gene-AL55_RS15575;Name=AL55_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15575;old_locus_tag=AL55_02018 NZ_KK316828.1 Protein Homology CDS 2193307 2194335 . + 0 ID=cds-WP_003899104.1;Parent=gene-AL55_RS15575;Dbxref=GenBank:WP_003899104.1;Name=WP_003899104.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216483.1;locus_tag=AL55_RS15575;product=virulence factor Mce family protein;protein_id=WP_003899104.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2194332 2195564 . + . ID=gene-AL55_RS15580;Name=AL55_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15580;old_locus_tag=AL55_02019 NZ_KK316828.1 Protein Homology CDS 2194332 2195564 . + 0 ID=cds-WP_003904746.1;Parent=gene-AL55_RS15580;Dbxref=GenBank:WP_003904746.1;Name=WP_003904746.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216484.1;locus_tag=AL55_RS15580;product=virulence factor Mce family protein;protein_id=WP_003904746.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2195561 2196832 . + . ID=gene-AL55_RS15585;Name=AL55_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15585;old_locus_tag=AL55_02020 NZ_KK316828.1 Protein Homology CDS 2195561 2196832 . + 0 ID=cds-WP_003899106.1;Parent=gene-AL55_RS15585;Dbxref=GenBank:WP_003899106.1;Name=WP_003899106.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216485.1;locus_tag=AL55_RS15585;product=virulence factor Mce family protein;protein_id=WP_003899106.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2196829 2197962 . + . ID=gene-AL55_RS15590;Name=lprM;gbkey=Gene;gene=lprM;gene_biotype=protein_coding;locus_tag=AL55_RS15590;old_locus_tag=AL55_02021 NZ_KK316828.1 Protein Homology CDS 2196829 2197962 . + 0 ID=cds-WP_003899107.1;Parent=gene-AL55_RS15590;Dbxref=GenBank:WP_003899107.1;Name=WP_003899107.1;gbkey=CDS;gene=lprM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216486.1;locus_tag=AL55_RS15590;product=Mce family lipoprotein LprM;protein_id=WP_003899107.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2197963 2199276 . + . ID=gene-AL55_RS15595;Name=AL55_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15595;old_locus_tag=AL55_02022 NZ_KK316828.1 Protein Homology CDS 2197963 2199276 . + 0 ID=cds-WP_003899108.1;Parent=gene-AL55_RS15595;Dbxref=GenBank:WP_003899108.1;Name=WP_003899108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216487.1;locus_tag=AL55_RS15595;product=MCE family protein;protein_id=WP_003899108.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2199298 2199873 . + . ID=gene-AL55_RS15600;Name=AL55_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15600;old_locus_tag=AL55_02023 NZ_KK316828.1 Protein Homology CDS 2199298 2199873 . + 0 ID=cds-WP_003905711.1;Parent=gene-AL55_RS15600;Dbxref=GenBank:WP_003905711.1;Name=WP_003905711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216488.1;locus_tag=AL55_RS15600;product=hypothetical protein;protein_id=WP_003905711.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2199870 2200352 . + . ID=gene-AL55_RS15605;Name=AL55_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15605;old_locus_tag=AL55_02024 NZ_KK316828.1 Protein Homology CDS 2199870 2200352 . + 0 ID=cds-WP_003899110.1;Parent=gene-AL55_RS15605;Dbxref=GenBank:WP_003899110.1;Name=WP_003899110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216489.1;locus_tag=AL55_RS15605;product=Mce associated membrane protein;protein_id=WP_003899110.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2200365 2200742 . + . ID=gene-AL55_RS15610;Name=AL55_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15610;old_locus_tag=AL55_02025 NZ_KK316828.1 Protein Homology CDS 2200365 2200742 . + 0 ID=cds-WP_003899111.1;Parent=gene-AL55_RS15610;Dbxref=GenBank:WP_003899111.1;Name=WP_003899111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216490.1;locus_tag=AL55_RS15610;product=DUF732 domain-containing protein;protein_id=WP_003899111.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2200758 2201423 . + . ID=gene-AL55_RS15615;Name=AL55_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15615;old_locus_tag=AL55_02026 NZ_KK316828.1 Protein Homology CDS 2200758 2201423 . + 0 ID=cds-WP_003899112.1;Parent=gene-AL55_RS15615;Dbxref=GenBank:WP_003899112.1;Name=WP_003899112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216491.1;locus_tag=AL55_RS15615;product=CAP domain-containing protein;protein_id=WP_003899112.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2201550 2201957 . - . ID=gene-AL55_RS15620;Name=AL55_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15620;old_locus_tag=AL55_02027 NZ_KK316828.1 Protein Homology CDS 2201550 2201957 . - 0 ID=cds-WP_003899113.1;Parent=gene-AL55_RS15620;Dbxref=GenBank:WP_003899113.1;Name=WP_003899113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216492.1;locus_tag=AL55_RS15620;product=NYN domain-containing protein;protein_id=WP_003899113.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2202020 2202301 . - . ID=gene-AL55_RS15625;Name=AL55_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15625;old_locus_tag=AL55_02028 NZ_KK316828.1 Protein Homology CDS 2202020 2202301 . - 0 ID=cds-WP_009940633.1;Parent=gene-AL55_RS15625;Dbxref=GenBank:WP_009940633.1;Name=WP_009940633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940633.1;locus_tag=AL55_RS15625;product=hypothetical protein;protein_id=WP_009940633.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2202428 2202586 . - . ID=gene-AL55_RS27920;Name=AL55_RS27920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27920;old_locus_tag=AL55_02029 NZ_KK316828.1 GeneMarkS-2+ CDS 2202428 2202586 . - 0 ID=cds-WP_269465927.1;Parent=gene-AL55_RS27920;Dbxref=GenBank:WP_269465927.1;Name=WP_269465927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS27920;product=hypothetical protein;protein_id=WP_269465927.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2202583 2203074 . - . ID=gene-AL55_RS15630;Name=AL55_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15630;old_locus_tag=AL55_02030 NZ_KK316828.1 Protein Homology CDS 2202583 2203074 . - 0 ID=cds-WP_003902251.1;Parent=gene-AL55_RS15630;Dbxref=GenBank:WP_003902251.1;Name=WP_003902251.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902251.1;locus_tag=AL55_RS15630;product=PE family protein;protein_id=WP_003902251.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2203854 2204603 . + . ID=gene-AL55_RS15635;Name=AL55_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15635;old_locus_tag=AL55_02031 NZ_KK316828.1 Protein Homology CDS 2203854 2204603 . + 0 ID=cds-WP_003908776.1;Parent=gene-AL55_RS15635;Dbxref=GenBank:WP_003908776.1;Name=WP_003908776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719163.1;locus_tag=AL55_RS15635;product=hypothetical protein;protein_id=WP_003908776.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2204600 2205346 . + . ID=gene-AL55_RS15640;Name=AL55_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15640;old_locus_tag=AL55_02032 NZ_KK316828.1 Protein Homology CDS 2204600 2205346 . + 0 ID=cds-WP_003901304.1;Parent=gene-AL55_RS15640;Dbxref=GenBank:WP_003901304.1;Name=WP_003901304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719162.1;locus_tag=AL55_RS15640;product=hypothetical protein;protein_id=WP_003901304.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2205399 2205668 . - . ID=gene-AL55_RS15645;Name=AL55_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15645;old_locus_tag=AL55_02033 NZ_KK316828.1 Protein Homology CDS 2205399 2205668 . - 0 ID=cds-WP_003901305.1;Parent=gene-AL55_RS15645;Dbxref=GenBank:WP_003901305.1;Name=WP_003901305.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001041.1;locus_tag=AL55_RS15645;product=EF-Tu/IF-2/RF-3 family GTPase;protein_id=WP_003901305.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2205746 2205925 . - . ID=gene-AL55_RS15650;Name=AL55_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15650;old_locus_tag=AL55_02034 NZ_KK316828.1 GeneMarkS-2+ CDS 2205746 2205925 . - 0 ID=cds-WP_003907830.1;Parent=gene-AL55_RS15650;Dbxref=GenBank:WP_003907830.1;Name=WP_003907830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS15650;product=dehydrogenase;protein_id=WP_003907830.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2206346 2206552 . + . ID=gene-AL55_RS27475;Name=AL55_RS27475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27475 NZ_KK316828.1 Protein Homology CDS 2206346 2206552 . + 0 ID=cds-WP_021082892.1;Parent=gene-AL55_RS27475;Dbxref=GenBank:WP_021082892.1;Name=WP_021082892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020725404.1;locus_tag=AL55_RS27475;product=hypothetical protein;protein_id=WP_021082892.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2206955 2208001 . + . ID=gene-AL55_RS15655;Name=AL55_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15655;old_locus_tag=AL55_02035 NZ_KK316828.1 Protein Homology CDS 2206955 2208001 . + 0 ID=cds-WP_003899114.1;Parent=gene-AL55_RS15655;Dbxref=GenBank:WP_003899114.1;Name=WP_003899114.1;Ontology_term=GO:0006508,GO:0004222,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216493.1;locus_tag=AL55_RS15655;product=M48 family metallopeptidase;protein_id=WP_003899114.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2208109 2208957 . + . ID=gene-AL55_RS15660;Name=AL55_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15660;old_locus_tag=AL55_02036 NZ_KK316828.1 Protein Homology CDS 2208109 2208957 . + 0 ID=cds-WP_003901306.1;Parent=gene-AL55_RS15660;Dbxref=GenBank:WP_003901306.1;Name=WP_003901306.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216494.1;locus_tag=AL55_RS15660;product=class I SAM-dependent methyltransferase;protein_id=WP_003901306.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2208920 2210365 . - . ID=gene-AL55_RS15665;Name=AL55_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15665;old_locus_tag=AL55_02037 NZ_KK316828.1 Protein Homology CDS 2208920 2210365 . - 0 ID=cds-WP_003899115.1;Parent=gene-AL55_RS15665;Dbxref=GenBank:WP_003899115.1;Name=WP_003899115.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216495.2;locus_tag=AL55_RS15665;product=APC family permease;protein_id=WP_003899115.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2210544 2211230 . - . ID=gene-AL55_RS15670;Name=mpt64;gbkey=Gene;gene=mpt64;gene_biotype=protein_coding;locus_tag=AL55_RS15670;old_locus_tag=AL55_02038 NZ_KK316828.1 Protein Homology CDS 2210544 2211230 . - 0 ID=cds-WP_003409954.1;Parent=gene-AL55_RS15670;Dbxref=GenBank:WP_003409954.1;Name=WP_003409954.1;gbkey=CDS;gene=mpt64;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216496.1;locus_tag=AL55_RS15670;product=immunoprotective protein Mpt64;protein_id=WP_003409954.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2211421 2212389 . - . ID=gene-AL55_RS15675;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AL55_RS15675;old_locus_tag=AL55_02039 NZ_KK316828.1 Protein Homology CDS 2211421 2212389 . - 0 ID=cds-WP_003899116.1;Parent=gene-AL55_RS15675;Dbxref=GenBank:WP_003899116.1;Name=WP_003899116.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177853.1;locus_tag=AL55_RS15675;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_003899116.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2212614 2213033 . - . ID=gene-AL55_RS15680;Name=AL55_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15680;old_locus_tag=AL55_02040 NZ_KK316828.1 Protein Homology CDS 2212614 2213033 . - 0 ID=cds-WP_003409958.1;Parent=gene-AL55_RS15680;Dbxref=GenBank:WP_003409958.1;Name=WP_003409958.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216498.1;locus_tag=AL55_RS15680;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003409958.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2213042 2213302 . - . ID=gene-AL55_RS15685;Name=AL55_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15685;old_locus_tag=AL55_02041 NZ_KK316828.1 Protein Homology CDS 2213042 2213302 . - 0 ID=cds-WP_003409968.1;Parent=gene-AL55_RS15685;Dbxref=GenBank:WP_003409968.1;Name=WP_003409968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837054.1;locus_tag=AL55_RS15685;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003409968.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2213445 2215121 . + . ID=gene-AL55_RS15690;Name=AL55_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15690;old_locus_tag=AL55_02042 NZ_KK316828.1 Protein Homology CDS 2213445 2215121 . + 0 ID=cds-WP_003899118.1;Parent=gene-AL55_RS15690;Dbxref=GenBank:WP_003899118.1;Name=WP_003899118.1;Ontology_term=GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177854.1;locus_tag=AL55_RS15690;product=PecA family PE domain-processing aspartic protease;protein_id=WP_003899118.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2215109 2215762 . - . ID=gene-AL55_RS15695;Name=cfp21;gbkey=Gene;gene=cfp21;gene_biotype=protein_coding;locus_tag=AL55_RS15695;old_locus_tag=AL55_02043 NZ_KK316828.1 Protein Homology CDS 2215109 2215762 . - 0 ID=cds-WP_003409976.1;Parent=gene-AL55_RS15695;Dbxref=GenBank:WP_003409976.1;Name=WP_003409976.1;gbkey=CDS;gene=cfp21;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216500.1;locus_tag=AL55_RS15695;product=cutinase Cfp21;protein_id=WP_003409976.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2215877 2216107 . + . ID=gene-AL55_RS15700;Name=AL55_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15700;old_locus_tag=AL55_02044 NZ_KK316828.1 Protein Homology CDS 2215877 2216107 . + 0 ID=cds-WP_003409980.1;Parent=gene-AL55_RS15700;Dbxref=GenBank:WP_003409980.1;Name=WP_003409980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012394608.1;locus_tag=AL55_RS15700;product=DUF167 domain-containing protein;protein_id=WP_003409980.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2216192 2217103 . - . ID=gene-AL55_RS15705;Name=AL55_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15705;old_locus_tag=AL55_02045 NZ_KK316828.1 Protein Homology CDS 2216192 2217103 . - 0 ID=cds-WP_003409986.1;Parent=gene-AL55_RS15705;Dbxref=GenBank:WP_003409986.1;Name=WP_003409986.1;Ontology_term=GO:0006351,GO:0008156,GO:0043200,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,negative regulation of DNA replication|0008156||IEA,response to amino acid|0043200||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216501.1;locus_tag=AL55_RS15705;product=ArgP/LysG family DNA-binding transcriptional regulator;protein_id=WP_003409986.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2217212 2217811 . + . ID=gene-AL55_RS15710;Name=lysE;gbkey=Gene;gene=lysE;gene_biotype=protein_coding;locus_tag=AL55_RS15710;old_locus_tag=AL55_02046 NZ_KK316828.1 Protein Homology CDS 2217212 2217811 . + 0 ID=cds-WP_003910883.1;Parent=gene-AL55_RS15710;Dbxref=GenBank:WP_003910883.1;Name=WP_003910883.1;Ontology_term=GO:0016020;gbkey=CDS;gene=lysE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216502.1;locus_tag=AL55_RS15710;product=L-lysine exporter;protein_id=WP_003910883.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2218227 2218655 . + . ID=gene-AL55_RS15715;Name=AL55_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15715;old_locus_tag=AL55_02047 NZ_KK316828.1 Protein Homology CDS 2218227 2218655 . + 0 ID=cds-WP_003409992.1;Parent=gene-AL55_RS15715;Dbxref=GenBank:WP_003409992.1;Name=WP_003409992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216503.1;locus_tag=AL55_RS15715;product=cellulose-binding protein;protein_id=WP_003409992.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2218881 2219420 . + . ID=gene-AL55_RS15720;Name=erm(37);gbkey=Gene;gene=erm(37);gene_biotype=protein_coding;locus_tag=AL55_RS15720;old_locus_tag=AL55_02048 NZ_KK316828.1 Protein Homology CDS 2218881 2219420 . + 0 ID=cds-WP_003900446.1;Parent=gene-AL55_RS15720;Dbxref=GenBank:WP_003900446.1;Name=WP_003900446.1;gbkey=CDS;gene=erm(37);inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900446.1;locus_tag=AL55_RS15720;product=23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37);protein_id=WP_003900446.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2219600 2219872 . + . ID=gene-AL55_RS28060;Name=AL55_RS28060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28060 NZ_KK316828.1 Protein Homology CDS 2219600 2219872 . + 0 ID=cds-WP_003409997.1;Parent=gene-AL55_RS28060;Dbxref=GenBank:WP_003409997.1;Name=WP_003409997.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.6;locus_tag=AL55_RS28060;product=PIN domain-containing protein;protein_id=WP_003409997.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2219940 2220500 . - . ID=gene-AL55_RS15725;Name=AL55_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15725;old_locus_tag=AL55_02049 NZ_KK316828.1 Protein Homology CDS 2219940 2220500 . - 0 ID=cds-WP_003410001.1;Parent=gene-AL55_RS15725;Dbxref=GenBank:WP_003410001.1;Name=WP_003410001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216505.1;locus_tag=AL55_RS15725;product=RES family NAD+ phosphorylase;protein_id=WP_003410001.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2220497 2220838 . - . ID=gene-AL55_RS15730;Name=AL55_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15730;old_locus_tag=AL55_02050 NZ_KK316828.1 Protein Homology CDS 2220497 2220838 . - 0 ID=cds-WP_003410003.1;Parent=gene-AL55_RS15730;Dbxref=GenBank:WP_003410003.1;Name=WP_003410003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216506.1;locus_tag=AL55_RS15730;product=antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein;protein_id=WP_003410003.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2220924 2221181 . + . ID=gene-AL55_RS15735;Name=AL55_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15735 NZ_KK316828.1 Protein Homology CDS 2220924 2221181 . + 0 ID=cds-WP_003410006.1;Parent=gene-AL55_RS15735;Dbxref=GenBank:WP_003410006.1;Name=WP_003410006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917558.1;locus_tag=AL55_RS15735;product=hypothetical protein;protein_id=WP_003410006.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2221330 2221417 . - . ID=gene-AL55_RS28215;Name=AL55_RS28215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28215;partial=true;pseudo=true;start_range=.,2221330 NZ_KK316828.1 Protein Homology CDS 2221330 2221417 . - 0 ID=cds-AL55_RS28215;Parent=gene-AL55_RS28215;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191102.1;locus_tag=AL55_RS28215;partial=true;product=dehydrogenase;pseudo=true;start_range=.,2221330;transl_table=11 NZ_KK316828.1 RefSeq gene 2221506 2221850 . - . ID=gene-AL55_RS15745;Name=mazF6;gbkey=Gene;gene=mazF6;gene_biotype=protein_coding;gene_synonym=mazF-mt3;locus_tag=AL55_RS15745;old_locus_tag=AL55_02052 NZ_KK316828.1 Protein Homology CDS 2221506 2221850 . - 0 ID=cds-WP_003410010.1;Parent=gene-AL55_RS15745;Dbxref=GenBank:WP_003410010.1;Name=WP_003410010.1;gbkey=CDS;gene=mazF6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216507.1;locus_tag=AL55_RS15745;product=type II toxin-antitoxin system toxin endoribonuclease MazF6;protein_id=WP_003410010.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2221844 2222092 . - . ID=gene-AL55_RS15750;Name=AL55_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15750;old_locus_tag=AL55_02053 NZ_KK316828.1 Protein Homology CDS 2221844 2222092 . - 0 ID=cds-WP_003410014.1;Parent=gene-AL55_RS15750;Dbxref=GenBank:WP_003410014.1;Name=WP_003410014.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410673.1;locus_tag=AL55_RS15750;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003410014.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2222192 2224507 . - . ID=gene-AL55_RS15755;Name=ctpG;gbkey=Gene;gene=ctpG;gene_biotype=protein_coding;locus_tag=AL55_RS15755;old_locus_tag=AL55_02054 NZ_KK316828.1 Protein Homology CDS 2222192 2224507 . - 0 ID=cds-WP_003899120.1;Parent=gene-AL55_RS15755;Dbxref=GenBank:WP_003899120.1;Name=WP_003899120.1;gbkey=CDS;gene=ctpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216508.1;locus_tag=AL55_RS15755;product=cation transporter ATPase CptG;protein_id=WP_003899120.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2224504 2224776 . - . ID=gene-AL55_RS15760;Name=AL55_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15760;old_locus_tag=AL55_02055 NZ_KK316828.1 Protein Homology CDS 2224504 2224776 . - 0 ID=cds-WP_003410017.1;Parent=gene-AL55_RS15760;Dbxref=GenBank:WP_003410017.1;Name=WP_003410017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216509.1;locus_tag=AL55_RS15760;product=DUF1490 family protein;protein_id=WP_003410017.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2224829 2225185 . - . ID=gene-AL55_RS15765;Name=cmtR;gbkey=Gene;gene=cmtR;gene_biotype=protein_coding;locus_tag=AL55_RS15765;old_locus_tag=AL55_02056 NZ_KK316828.1 Protein Homology CDS 2224829 2225185 . - 0 ID=cds-WP_003410018.1;Parent=gene-AL55_RS15765;Dbxref=GenBank:WP_003410018.1;Name=WP_003410018.1;Ontology_term=GO:0006355,GO:0010288,GO:0046686,GO:0003700,GO:0032791,GO:0046870,GO:0097063;gbkey=CDS;gene=cmtR;go_function=DNA-binding transcription factor activity|0003700||IEA,lead ion binding|0032791||IEA,cadmium ion binding|0046870||IEA,cadmium ion sensor activity|0097063||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to lead ion|0010288||IEA,response to cadmium ion|0046686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216510.1;locus_tag=AL55_RS15765;product=Cd(II)/Pb(II)-sensing metalloregulatory transcriptional regulator CmtR;protein_id=WP_003410018.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2225342 2226109 . + . ID=gene-AL55_RS15770;Name=AL55_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15770;old_locus_tag=AL55_02057 NZ_KK316828.1 Protein Homology CDS 2225342 2226109 . + 0 ID=cds-WP_003410019.1;Parent=gene-AL55_RS15770;Dbxref=GenBank:WP_003410019.1;Name=WP_003410019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216511.1;locus_tag=AL55_RS15770;product=hemerythrin domain-containing protein;protein_id=WP_003410019.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2226205 2227158 . + . ID=gene-AL55_RS15775;Name=AL55_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15775;old_locus_tag=AL55_02058 NZ_KK316828.1 Protein Homology CDS 2226205 2227158 . + 0 ID=cds-WP_003899121.1;Parent=gene-AL55_RS15775;Dbxref=GenBank:WP_003899121.1;Name=WP_003899121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216512.1;locus_tag=AL55_RS15775;product=universal stress protein;protein_id=WP_003899121.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2227360 2230076 . + . ID=gene-AL55_RS0104900;Name=ctpF;gbkey=Gene;gene=ctpF;gene_biotype=pseudogene;locus_tag=AL55_RS0104900;old_locus_tag=AL55_02059;pseudo=true NZ_KK316828.1 Protein Homology CDS 2227360 2230076 . + 0 ID=cds-AL55_RS0104900;Parent=gene-AL55_RS0104900;Note=frameshifted;gbkey=CDS;gene=ctpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216513.1;locus_tag=AL55_RS0104900;product=cation-transporting P-type ATPase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2230145 2230921 . - . ID=gene-AL55_RS15780;Name=AL55_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15780;old_locus_tag=AL55_02060 NZ_KK316828.1 Protein Homology CDS 2230145 2230921 . - 0 ID=cds-WP_003899122.1;Parent=gene-AL55_RS15780;Dbxref=GenBank:WP_003899122.1;Name=WP_003899122.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216514.1;locus_tag=AL55_RS15780;product=isocitrate lyase/PEP mutase family protein;protein_id=WP_003899122.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2231016 2232338 . - . ID=gene-AL55_RS15785;Name=AL55_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15785;old_locus_tag=AL55_02061 NZ_KK316828.1 Protein Homology CDS 2231016 2232338 . - 0 ID=cds-WP_003901309.1;Parent=gene-AL55_RS15785;Dbxref=GenBank:WP_003901309.1;Name=WP_003901309.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216515.1;locus_tag=AL55_RS15785;product=APC family permease;protein_id=WP_003901309.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2232409 2234022 . + . ID=gene-AL55_RS15790;Name=AL55_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15790;old_locus_tag=AL55_02062 NZ_KK316828.1 Protein Homology CDS 2232409 2234022 . + 0 ID=cds-WP_003902248.1;Parent=gene-AL55_RS15790;Dbxref=GenBank:WP_003902248.1;Name=WP_003902248.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216516.1;locus_tag=AL55_RS15790;product=NAD(P)-binding protein;protein_id=WP_003902248.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2234032 2234784 . + . ID=gene-AL55_RS15795;Name=AL55_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15795;old_locus_tag=AL55_02063 NZ_KK316828.1 Protein Homology CDS 2234032 2234784 . + 0 ID=cds-WP_003900448.1;Parent=gene-AL55_RS15795;Dbxref=GenBank:WP_003900448.1;Name=WP_003900448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216517.1;locus_tag=AL55_RS15795;product=acyl-[acyl-carrier-protein] thioesterase;protein_id=WP_003900448.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2234860 2235642 . + . ID=gene-AL55_RS15800;Name=AL55_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15800;old_locus_tag=AL55_02064 NZ_KK316828.1 Protein Homology CDS 2234860 2235642 . + 0 ID=cds-WP_003410047.1;Parent=gene-AL55_RS15800;Dbxref=GenBank:WP_003410047.1;Name=WP_003410047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216518.1;locus_tag=AL55_RS15800;product=SDR family oxidoreductase;protein_id=WP_003410047.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2235763 2236452 . - . ID=gene-AL55_RS15805;Name=AL55_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15805;old_locus_tag=AL55_02065 NZ_KK316828.1 Protein Homology CDS 2235763 2236452 . - 0 ID=cds-WP_003899125.1;Parent=gene-AL55_RS15805;Dbxref=GenBank:WP_003899125.1;Name=WP_003899125.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899125.1;locus_tag=AL55_RS15805;product=class I SAM-dependent methyltransferase;protein_id=WP_003899125.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2236460 2236657 . - . ID=gene-AL55_RS27310;Name=AL55_RS27310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27310 NZ_KK316828.1 Protein Homology CDS 2236460 2236657 . - 0 ID=cds-WP_003410051.1;Parent=gene-AL55_RS27310;Dbxref=GenBank:WP_003410051.1;Name=WP_003410051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410051.1;locus_tag=AL55_RS27310;product=phosphoenolpyruvate synthase;protein_id=WP_003410051.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2236678 2238174 . - . ID=gene-AL55_RS15810;Name=AL55_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15810;old_locus_tag=AL55_02066 NZ_KK316828.1 Protein Homology CDS 2236678 2238174 . - 0 ID=cds-WP_003410057.1;Parent=gene-AL55_RS15810;Dbxref=GenBank:WP_003410057.1;Name=WP_003410057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216520.1;locus_tag=AL55_RS15810;product=bifunctional aminoglycoside phosphotransferase/ATP-binding protein;protein_id=WP_003410057.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2238196 2239083 . - . ID=gene-AL55_RS15815;Name=AL55_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15815;old_locus_tag=AL55_02067 NZ_KK316828.1 Protein Homology CDS 2238196 2239083 . - 0 ID=cds-WP_003410060.1;Parent=gene-AL55_RS15815;Dbxref=GenBank:WP_003410060.1;Name=WP_003410060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216521.1;locus_tag=AL55_RS15815;product=universal stress protein;protein_id=WP_003410060.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2239202 2243185 . + . ID=gene-AL55_RS15820;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AL55_RS15820;old_locus_tag=AL55_02068 NZ_KK316828.1 Protein Homology CDS 2239202 2243185 . + 0 ID=cds-WP_003410063.1;Parent=gene-AL55_RS15820;Dbxref=GenBank:WP_003410063.1;Name=WP_003410063.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177855.1;locus_tag=AL55_RS15820;product=trehalose-phosphatase;protein_id=WP_003410063.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2243284 2243628 . - . ID=gene-AL55_RS15825;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=AL55_RS15825;old_locus_tag=AL55_02069 NZ_KK316828.1 Protein Homology CDS 2243284 2243628 . - 0 ID=cds-WP_003410065.1;Parent=gene-AL55_RS15825;Dbxref=GenBank:WP_003410065.1;Name=WP_003410065.1;Ontology_term=GO:0009055,GO:0046872;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216523.1;locus_tag=AL55_RS15825;product=ferredoxin;protein_id=WP_003410065.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2243817 2244986 . - . ID=gene-AL55_RS15830;Name=AL55_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15830;old_locus_tag=AL55_02070 NZ_KK316828.1 Protein Homology CDS 2243817 2244986 . - 0 ID=cds-WP_003899126.1;Parent=gene-AL55_RS15830;Dbxref=GenBank:WP_003899126.1;Name=WP_003899126.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899126.1;locus_tag=AL55_RS15830;product=ATP-binding protein;protein_id=WP_003899126.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2245245 2245472 . + . ID=gene-AL55_RS15835;Name=AL55_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15835;old_locus_tag=AL55_02071 NZ_KK316828.1 Protein Homology CDS 2245245 2245472 . + 0 ID=cds-WP_003911750.1;Parent=gene-AL55_RS15835;Dbxref=GenBank:WP_003911750.1;Name=WP_003911750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019283586.1;locus_tag=AL55_RS15835;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003911750.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2245473 2245871 . + . ID=gene-AL55_RS15840;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=AL55_RS15840;old_locus_tag=AL55_02072 NZ_KK316828.1 Protein Homology CDS 2245473 2245871 . + 0 ID=cds-WP_003410075.1;Parent=gene-AL55_RS15840;Dbxref=GenBank:WP_003410075.1;Name=WP_003410075.1;Ontology_term=GO:0004518,GO:0110001;gbkey=CDS;gene=vapC;go_component=toxin-antitoxin complex|0110001||IEA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216526.1;locus_tag=AL55_RS15840;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003410075.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2246054 2246485 . - . ID=gene-AL55_RS15845;Name=AL55_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15845;old_locus_tag=AL55_02073 NZ_KK316828.1 Protein Homology CDS 2246054 2246485 . - 0 ID=cds-WP_003410078.1;Parent=gene-AL55_RS15845;Dbxref=GenBank:WP_003410078.1;Name=WP_003410078.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216527.1;locus_tag=AL55_RS15845;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003410078.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2246586 2247020 . + . ID=gene-AL55_RS15850;Name=AL55_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15850;old_locus_tag=AL55_02074 NZ_KK316828.1 Protein Homology CDS 2246586 2247020 . + 0 ID=cds-WP_003914358.1;Parent=gene-AL55_RS15850;Dbxref=GenBank:WP_003914358.1;Name=WP_003914358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914358.1;locus_tag=AL55_RS15850;product=DUF1398 domain-containing protein;protein_id=WP_003914358.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2247156 2247415 . - . ID=gene-AL55_RS28220;Name=AL55_RS28220;end_range=2247415,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28220;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 2247156 2247415 . - 0 ID=cds-AL55_RS28220;Parent=gene-AL55_RS28220;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2247415,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410139.1;locus_tag=AL55_RS28220;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2247457 2247639 . - . ID=gene-AL55_RS26080;Name=AL55_RS26080;end_range=2247639,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS26080;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 2247457 2247639 . - 0 ID=cds-AL55_RS26080;Parent=gene-AL55_RS26080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2247639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217738.1;locus_tag=AL55_RS26080;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2247661 2248888 . + . ID=gene-AL55_RS28225;Name=AL55_RS28225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28225;pseudo=true NZ_KK316828.1 Protein Homology CDS 2247661 2248888 . + 0 ID=cds-AL55_RS28225;Parent=gene-AL55_RS28225;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007168642.1;locus_tag=AL55_RS28225;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2249016 2250272 . - . ID=gene-AL55_RS15860;Name=AL55_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15860;old_locus_tag=AL55_02077 NZ_KK316828.1 Protein Homology CDS 2249016 2250272 . - 0 ID=cds-WP_003902247.1;Parent=gene-AL55_RS15860;Dbxref=GenBank:WP_003902247.1;Name=WP_003902247.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216531.1;locus_tag=AL55_RS15860;product=HNH endonuclease signature motif containing protein;protein_id=WP_003902247.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2250626 2250826 . + . ID=gene-AL55_RS0104920;Name=AL55_RS0104920;end_range=2250826,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0104920;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 2250626 2250826 . + 0 ID=cds-AL55_RS0104920;Parent=gene-AL55_RS0104920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2250826,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216532.1;locus_tag=AL55_RS0104920;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2250870 2252131 . - . ID=gene-AL55_RS15865;Name=AL55_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15865;old_locus_tag=AL55_02078 NZ_KK316828.1 Protein Homology CDS 2251843 2252131 . - 0 ID=cds-WP_087902221.1-7;Parent=gene-AL55_RS15865;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS15865;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 2250870 2251843 . - 2 ID=cds-WP_087902221.1-7;Parent=gene-AL55_RS15865;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS15865;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2252182 2252559 . + . ID=gene-AL55_RS15875;Name=AL55_RS15875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS15875;old_locus_tag=AL55_02080;partial=true;pseudo=true;start_range=.,2252182 NZ_KK316828.1 Protein Homology CDS 2252182 2252559 . + 0 ID=cds-AL55_RS15875;Parent=gene-AL55_RS15875;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216532.1;locus_tag=AL55_RS15875;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2252182;transl_table=11 NZ_KK316828.1 RefSeq gene 2252556 2253596 . + . ID=gene-AL55_RS15880;Name=AL55_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15880;old_locus_tag=AL55_02081 NZ_KK316828.1 Protein Homology CDS 2252556 2253596 . + 0 ID=cds-WP_003410103.1;Parent=gene-AL55_RS15880;Dbxref=GenBank:WP_003410103.1;Name=WP_003410103.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216533.1;locus_tag=AL55_RS15880;product=helix-turn-helix domain-containing protein;protein_id=WP_003410103.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2253838 2254557 . + . ID=gene-AL55_RS15885;Name=AL55_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15885;old_locus_tag=AL55_02082 NZ_KK316828.1 Protein Homology CDS 2253838 2254557 . + 0 ID=cds-WP_003410108.1;Parent=gene-AL55_RS15885;Dbxref=GenBank:WP_003410108.1;Name=WP_003410108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216534.1;locus_tag=AL55_RS15885;product=Rv2018 family toxin-antitoxin system antitoxin;protein_id=WP_003410108.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2254547 2254963 . + . ID=gene-AL55_RS15890;Name=AL55_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15890;old_locus_tag=AL55_02083 NZ_KK316828.1 Protein Homology CDS 2254547 2254963 . + 0 ID=cds-WP_003410114.1;Parent=gene-AL55_RS15890;Dbxref=GenBank:WP_003410114.1;Name=WP_003410114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216535.1;locus_tag=AL55_RS15890;product=Rv2019 family toxin-antitoxin system toxin ribonuclease;protein_id=WP_003410114.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2254979 2255278 . - . ID=gene-AL55_RS15895;Name=AL55_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15895;old_locus_tag=AL55_02084 NZ_KK316828.1 Protein Homology CDS 2254979 2255278 . - 0 ID=cds-WP_003410120.1;Parent=gene-AL55_RS15895;Dbxref=GenBank:WP_003410120.1;Name=WP_003410120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410120.1;locus_tag=AL55_RS15895;product=type ISP restriction/modification enzyme;protein_id=WP_003410120.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2255363 2255668 . - . ID=gene-AL55_RS15900;Name=AL55_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15900;old_locus_tag=AL55_02085 NZ_KK316828.1 Protein Homology CDS 2255363 2255668 . - 0 ID=cds-WP_003410124.1;Parent=gene-AL55_RS15900;Dbxref=GenBank:WP_003410124.1;Name=WP_003410124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216537.1;locus_tag=AL55_RS15900;product=helix-turn-helix domain-containing protein;protein_id=WP_003410124.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2255677 2256282 . - . ID=gene-AL55_RS26085;Name=AL55_RS26085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26085;old_locus_tag=AL55_02086 NZ_KK316828.1 Protein Homology CDS 2255677 2256282 . - 0 ID=cds-WP_003900449.1;Parent=gene-AL55_RS26085;Dbxref=GenBank:WP_003900449.1;Name=WP_003900449.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216538.1;locus_tag=AL55_RS26085;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003900449.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2256445 2256723 . - . ID=gene-AL55_RS28230;Name=AL55_RS28230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28230;partial=true;pseudo=true;start_range=.,2256445 NZ_KK316828.1 Protein Homology CDS 2256445 2256723 . - 0 ID=cds-AL55_RS28230;Parent=gene-AL55_RS28230;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_374101691.1;locus_tag=AL55_RS28230;partial=true;product=IS1380 family transposase;pseudo=true;start_range=.,2256445;transl_table=11 NZ_KK316828.1 RefSeq gene 2256826 2257503 . - . ID=gene-AL55_RS15915;Name=AL55_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15915;old_locus_tag=AL55_02088 NZ_KK316828.1 Protein Homology CDS 2256826 2257503 . - 0 ID=cds-WP_003905725.1;Parent=gene-AL55_RS15915;Dbxref=GenBank:WP_003905725.1;Name=WP_003905725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003904758.1;locus_tag=AL55_RS15915;product=hypothetical protein;protein_id=WP_003905725.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2257455 2257691 . - . ID=gene-AL55_RS15920;Name=AL55_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15920;old_locus_tag=AL55_02089 NZ_KK316828.1 Protein Homology CDS 2257455 2257691 . - 0 ID=cds-WP_003410133.1;Parent=gene-AL55_RS15920;Dbxref=GenBank:WP_003410133.1;Name=WP_003410133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410133.1;locus_tag=AL55_RS15920;product=hypothetical protein;protein_id=WP_003410133.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2257898 2258794 . - . ID=gene-AL55_RS15925;Name=AL55_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15925;old_locus_tag=AL55_02090 NZ_KK316828.1 Protein Homology CDS 2257898 2258794 . - 0 ID=cds-WP_003410136.1;Parent=gene-AL55_RS15925;Dbxref=GenBank:WP_003410136.1;Name=WP_003410136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917565.1;locus_tag=AL55_RS15925;product=hypothetical protein;protein_id=WP_003410136.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2258978 2263798 . - . ID=gene-AL55_RS15930;Name=AL55_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15930;old_locus_tag=AL55_02091 NZ_KK316828.1 Protein Homology CDS 2258978 2263798 . - 0 ID=cds-WP_003900451.1;Parent=gene-AL55_RS15930;Dbxref=GenBank:WP_003900451.1;Name=WP_003900451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410139.1;locus_tag=AL55_RS15930;product=DEAD/DEAH box helicase;protein_id=WP_003900451.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2264101 2264334 . + . ID=gene-AL55_RS28235;Name=AL55_RS28235;end_range=2264334,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28235;partial=true;pseudo=true;start_range=.,2264101 NZ_KK316828.1 Protein Homology CDS 2264101 2264334 . + 0 ID=cds-AL55_RS28235;Parent=gene-AL55_RS28235;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2264334,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611777.1;locus_tag=AL55_RS28235;partial=true;product=IS3-like element ISMysp3 family transposase;pseudo=true;start_range=.,2264101;transl_table=11 NZ_KK316828.1 RefSeq gene 2264308 2265306 . - . ID=gene-AL55_RS15935;Name=AL55_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15935;old_locus_tag=AL55_02093 NZ_KK316828.1 Protein Homology CDS 2264308 2265306 . - 0 ID=cds-WP_003410146.1;Parent=gene-AL55_RS15935;Dbxref=GenBank:WP_003410146.1;Name=WP_003410146.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216541.1;locus_tag=AL55_RS15935;product=cation diffusion facilitator family transporter;protein_id=WP_003410146.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2265421 2266305 . - . ID=gene-AL55_RS15940;Name=AL55_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15940;old_locus_tag=AL55_02094 NZ_KK316828.1 Protein Homology CDS 2265421 2266305 . - 0 ID=cds-WP_003410150.1;Parent=gene-AL55_RS15940;Dbxref=GenBank:WP_003410150.1;Name=WP_003410150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216542.1;locus_tag=AL55_RS15940;product=universal stress protein;protein_id=WP_003410150.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2266345 2268065 . - . ID=gene-AL55_RS27315;Name=dosT;gbkey=Gene;gene=dosT;gene_biotype=pseudogene;locus_tag=AL55_RS27315;pseudo=true NZ_KK316828.1 Protein Homology CDS 2266345 2268065 . - 0 ID=cds-AL55_RS27315;Parent=gene-AL55_RS27315;Note=frameshifted;gbkey=CDS;gene=dosT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216543.1;locus_tag=AL55_RS27315;product=two-component system sensor histidine kinase DosT;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2268126 2268965 . - . ID=gene-AL55_RS15945;Name=AL55_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15945;old_locus_tag=AL55_02096 NZ_KK316828.1 Protein Homology CDS 2268126 2268965 . - 0 ID=cds-WP_031721592.1;Parent=gene-AL55_RS15945;Dbxref=GenBank:WP_031721592.1;Name=WP_031721592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216544.1;locus_tag=AL55_RS15945;product=universal stress protein;protein_id=WP_031721592.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2268962 2269981 . - . ID=gene-AL55_RS15950;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=AL55_RS15950;old_locus_tag=AL55_02097 NZ_KK316828.1 Protein Homology CDS 2268962 2269981 . - 0 ID=cds-WP_003899139.1;Parent=gene-AL55_RS15950;Dbxref=GenBank:WP_003899139.1;Name=WP_003899139.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;gene=pfkB;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216545.1;locus_tag=AL55_RS15950;product=1-phosphofructokinase family hexose kinase;protein_id=WP_003899139.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2269998 2272043 . - . ID=gene-AL55_RS15955;Name=AL55_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15955;old_locus_tag=AL55_02098 NZ_KK316828.1 Protein Homology CDS 2269998 2272043 . - 0 ID=cds-WP_003410178.1;Parent=gene-AL55_RS15955;Dbxref=GenBank:WP_003410178.1;Name=WP_003410178.1;Ontology_term=GO:0046677;gbkey=CDS;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216546.1;locus_tag=AL55_RS15955;product=erythromycin esterase family protein;protein_id=WP_003410178.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2272055 2272489 . - . ID=gene-AL55_RS15960;Name=hspX;gbkey=Gene;gene=hspX;gene_biotype=protein_coding;gene_synonym=acr;locus_tag=AL55_RS15960;old_locus_tag=AL55_02099 NZ_KK316828.1 Protein Homology CDS 2272055 2272489 . - 0 ID=cds-WP_003410189.1;Parent=gene-AL55_RS15960;Dbxref=GenBank:WP_003410189.1;Name=WP_003410189.1;gbkey=CDS;gene=hspX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216547.1;locus_tag=AL55_RS15960;product=alpha-crystallin HspX;protein_id=WP_003410189.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2272686 2273681 . + . ID=gene-AL55_RS15965;Name=acg;gbkey=Gene;gene=acg;gene_biotype=protein_coding;locus_tag=AL55_RS15965;old_locus_tag=AL55_02100 NZ_KK316828.1 Protein Homology CDS 2272686 2273681 . + 0 ID=cds-WP_003410193.1;Parent=gene-AL55_RS15965;Dbxref=GenBank:WP_003410193.1;Name=WP_003410193.1;gbkey=CDS;gene=acg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216548.1;locus_tag=AL55_RS15965;product=FMN-binding protein Acg;protein_id=WP_003410193.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2273797 2274639 . - . ID=gene-AL55_RS15970;Name=AL55_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15970;old_locus_tag=AL55_02101 NZ_KK316828.1 Protein Homology CDS 2273797 2274639 . - 0 ID=cds-WP_003410196.1;Parent=gene-AL55_RS15970;Dbxref=GenBank:WP_003410196.1;Name=WP_003410196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216549.1;locus_tag=AL55_RS15970;product=DUF3097 domain-containing protein;protein_id=WP_003410196.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2274851 2275174 . + . ID=gene-AL55_RS15975;Name=AL55_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15975;old_locus_tag=AL55_02102 NZ_KK316828.1 Protein Homology CDS 2274851 2275174 . + 0 ID=cds-WP_003410200.1;Parent=gene-AL55_RS15975;Dbxref=GenBank:WP_003410200.1;Name=WP_003410200.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216550.1;locus_tag=AL55_RS15975;product=ArsR/SmtB family transcription factor;protein_id=WP_003410200.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2275171 2275659 . + . ID=gene-AL55_RS15980;Name=AL55_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15980;old_locus_tag=AL55_02103 NZ_KK316828.1 Protein Homology CDS 2275171 2275659 . + 0 ID=cds-WP_003899141.1;Parent=gene-AL55_RS15980;Dbxref=GenBank:WP_003899141.1;Name=WP_003899141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216551.1;locus_tag=AL55_RS15980;product=SRPBCC family protein;protein_id=WP_003899141.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2275656 2276297 . + . ID=gene-AL55_RS15985;Name=AL55_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15985;old_locus_tag=AL55_02104 NZ_KK316828.1 Protein Homology CDS 2275656 2276297 . + 0 ID=cds-WP_003899142.1;Parent=gene-AL55_RS15985;Dbxref=GenBank:WP_003899142.1;Name=WP_003899142.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216552.1;locus_tag=AL55_RS15985;product=maleylpyruvate isomerase family mycothiol-dependent enzyme;protein_id=WP_003899142.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2276304 2277278 . - . ID=gene-AL55_RS15990;Name=AL55_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15990;old_locus_tag=AL55_02105 NZ_KK316828.1 Protein Homology CDS 2276304 2277278 . - 0 ID=cds-WP_003410214.1;Parent=gene-AL55_RS15990;Dbxref=GenBank:WP_003410214.1;Name=WP_003410214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216553.1;locus_tag=AL55_RS15990;product=patatin-like phospholipase family protein;protein_id=WP_003410214.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2277280 2278353 . - . ID=gene-AL55_RS15995;Name=AL55_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS15995;old_locus_tag=AL55_02106 NZ_KK316828.1 Protein Homology CDS 2277280 2278353 . - 0 ID=cds-WP_003410218.1;Parent=gene-AL55_RS15995;Dbxref=GenBank:WP_003410218.1;Name=WP_003410218.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216554.1;locus_tag=AL55_RS15995;product=ABC transporter ATP-binding protein;protein_id=WP_003410218.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2278356 2279198 . - . ID=gene-AL55_RS16000;Name=AL55_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16000;old_locus_tag=AL55_02107 NZ_KK316828.1 Protein Homology CDS 2278356 2279198 . - 0 ID=cds-WP_003410221.1;Parent=gene-AL55_RS16000;Dbxref=GenBank:WP_003410221.1;Name=WP_003410221.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216555.1;locus_tag=AL55_RS16000;product=carbohydrate ABC transporter permease;protein_id=WP_003410221.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2279185 2280087 . - . ID=gene-AL55_RS16005;Name=AL55_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16005;old_locus_tag=AL55_02108 NZ_KK316828.1 Protein Homology CDS 2279185 2280087 . - 0 ID=cds-WP_003410224.1;Parent=gene-AL55_RS16005;Dbxref=GenBank:WP_003410224.1;Name=WP_003410224.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216556.1;locus_tag=AL55_RS16005;product=carbohydrate ABC transporter permease;protein_id=WP_003410224.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2280084 2281403 . - . ID=gene-AL55_RS16010;Name=AL55_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16010;old_locus_tag=AL55_02109 NZ_KK316828.1 Protein Homology CDS 2280084 2281403 . - 0 ID=cds-WP_003410228.1;Parent=gene-AL55_RS16010;Dbxref=GenBank:WP_003410228.1;Name=WP_003410228.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216557.1;locus_tag=AL55_RS16010;product=ABC transporter substrate-binding protein;protein_id=WP_003410228.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2281441 2282238 . - . ID=gene-AL55_RS16015;Name=AL55_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16015;old_locus_tag=AL55_02110 NZ_KK316828.1 Protein Homology CDS 2281441 2282238 . - 0 ID=cds-WP_003899143.1;Parent=gene-AL55_RS16015;Dbxref=GenBank:WP_003899143.1;Name=WP_003899143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216558.1;locus_tag=AL55_RS16015;product=ketosteroid isomerase family protein;protein_id=WP_003899143.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2282238 2282798 . - . ID=gene-AL55_RS16020;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=AL55_RS16020;old_locus_tag=AL55_02111 NZ_KK316828.1 Protein Homology CDS 2282238 2282798 . - 0 ID=cds-WP_003410243.1;Parent=gene-AL55_RS16020;Dbxref=GenBank:WP_003410243.1;Name=WP_003410243.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216559.1;locus_tag=AL55_RS16020;product=pyrazinamidase PncA;protein_id=WP_003410243.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2282839 2283189 . - . ID=gene-AL55_RS16025;Name=AL55_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16025;old_locus_tag=AL55_02112 NZ_KK316828.1 Protein Homology CDS 2282839 2283189 . - 0 ID=cds-WP_003902241.1;Parent=gene-AL55_RS16025;Dbxref=GenBank:WP_003902241.1;Name=WP_003902241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902241.1;locus_tag=AL55_RS16025;product=DUF2784 domain-containing protein;protein_id=WP_003902241.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2283242 2284747 . - . ID=gene-AL55_RS16030;Name=lipT;gbkey=Gene;gene=lipT;gene_biotype=protein_coding;locus_tag=AL55_RS16030;old_locus_tag=AL55_02113 NZ_KK316828.1 Protein Homology CDS 2283242 2284747 . - 0 ID=cds-WP_003916923.1;Parent=gene-AL55_RS16030;Dbxref=GenBank:WP_003916923.1;Name=WP_003916923.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;gene=lipT;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940658.1;locus_tag=AL55_RS16030;product=carboxylesterase/lipase family protein;protein_id=WP_003916923.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2284826 2285482 . + . ID=gene-AL55_RS16035;Name=AL55_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16035;old_locus_tag=AL55_02114 NZ_KK316828.1 Protein Homology CDS 2284826 2285482 . + 0 ID=cds-WP_003899146.1;Parent=gene-AL55_RS16035;Dbxref=GenBank:WP_003899146.1;Name=WP_003899146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216562.1;locus_tag=AL55_RS16035;product=hypothetical protein;protein_id=WP_003899146.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2285519 2288083 . - . ID=gene-AL55_RS16040;Name=AL55_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16040;old_locus_tag=AL55_02115 NZ_KK316828.1 Protein Homology CDS 2285519 2288083 . - 0 ID=cds-WP_003901314.1;Parent=gene-AL55_RS16040;Dbxref=GenBank:WP_003901314.1;Name=WP_003901314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216563.1;locus_tag=AL55_RS16040;product=sugar epimerase family protein;protein_id=WP_003901314.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2288088 2289320 . - . ID=gene-AL55_RS0104930;Name=AL55_RS0104930;end_range=2289320,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104930;partial=true NZ_KK316828.1 Protein Homology CDS 2288088 2289320 . - 0 ID=cds-WP_031721881.1;Parent=gene-AL55_RS0104930;Dbxref=GenBank:WP_031721881.1;Name=WP_031721881.1;Ontology_term=GO:0006633,GO:0030639,GO:0034081;end_range=2289320,.;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216564.2;locus_tag=AL55_RS0104930;partial=true;product=type I polyketide synthase;protein_id=WP_031721881.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2296403 2307655 . - . ID=gene-AL55_RS16045;Name=AL55_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16045;old_locus_tag=AL55_02116;partial=true;start_range=.,2296403 NZ_KK316828.1 Protein Homology CDS 2296403 2307655 . - 0 ID=cds-WP_031721882.1;Parent=gene-AL55_RS16045;Dbxref=GenBank:WP_031721882.1;Name=WP_031721882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216564.2;locus_tag=AL55_RS16045;partial=true;product=type I polyketide synthase;protein_id=WP_031721882.1;start_range=.,2296403;transl_table=11 NZ_KK316828.1 RefSeq gene 2307962 2308312 . - . ID=gene-AL55_RS27320;Name=AL55_RS27320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27320 NZ_KK316828.1 Protein Homology CDS 2307962 2308312 . - 0 ID=cds-WP_003912718.1;Parent=gene-AL55_RS27320;Dbxref=GenBank:WP_003912718.1;Name=WP_003912718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912718.1;locus_tag=AL55_RS27320;product=hypothetical protein;protein_id=WP_003912718.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2308490 2308825 . + . ID=gene-AL55_RS16050;Name=rbpA;gbkey=Gene;gene=rbpA;gene_biotype=protein_coding;locus_tag=AL55_RS16050;old_locus_tag=AL55_02118 NZ_KK316828.1 Protein Homology CDS 2308490 2308825 . + 0 ID=cds-WP_003410601.1;Parent=gene-AL55_RS16050;Dbxref=GenBank:WP_003410601.1;Name=WP_003410601.1;gbkey=CDS;gene=rbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216566.1;locus_tag=AL55_RS16050;product=RNA polymerase-binding protein RbpA;protein_id=WP_003410601.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2308800 2311424 . - . ID=gene-AL55_RS26105;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AL55_RS26105;old_locus_tag=AL55_02119 NZ_KK316828.1 Protein Homology CDS 2308800 2311424 . - 0 ID=cds-WP_003902238.1;Parent=gene-AL55_RS26105;Dbxref=GenBank:WP_003902238.1;Name=WP_003902238.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216567.1;locus_tag=AL55_RS26105;product=apolipoprotein N-acyltransferase;protein_id=WP_003902238.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2311582 2313186 . - . ID=gene-AL55_RS16055;Name=AL55_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16055;old_locus_tag=AL55_02120 NZ_KK316828.1 Protein Homology CDS 2311582 2313186 . - 0 ID=cds-WP_003410605.1;Parent=gene-AL55_RS16055;Dbxref=GenBank:WP_003410605.1;Name=WP_003410605.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216568.1;locus_tag=AL55_RS16055;product=amidohydrolase;protein_id=WP_003410605.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2313191 2313718 . - . ID=gene-AL55_RS16060;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=AL55_RS16060;old_locus_tag=AL55_02121 NZ_KK316828.1 Protein Homology CDS 2313191 2313718 . - 0 ID=cds-WP_003410608.1;Parent=gene-AL55_RS16060;Dbxref=GenBank:WP_003410608.1;Name=WP_003410608.1;Ontology_term=GO:0005886;gbkey=CDS;gene=fxsA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216569.1;locus_tag=AL55_RS16060;product=FxsA family protein;protein_id=WP_003410608.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2313794 2314507 . + . ID=gene-AL55_RS16065;Name=AL55_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16065;old_locus_tag=AL55_02122 NZ_KK316828.1 Protein Homology CDS 2313794 2314507 . + 0 ID=cds-WP_003410610.1;Parent=gene-AL55_RS16065;Dbxref=GenBank:WP_003410610.1;Name=WP_003410610.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216570.1;locus_tag=AL55_RS16065;product=dienelactone hydrolase family protein;protein_id=WP_003410610.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2314756 2315022 . - . ID=gene-AL55_RS16070;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AL55_RS16070;old_locus_tag=AL55_02123 NZ_KK316828.1 Protein Homology CDS 2314756 2315022 . - 0 ID=cds-WP_003410619.1;Parent=gene-AL55_RS16070;Dbxref=GenBank:WP_003410619.1;Name=WP_003410619.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216571.1;locus_tag=AL55_RS16070;product=30S ribosomal protein S18;protein_id=WP_003410619.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2315023 2315328 . - . ID=gene-AL55_RS16075;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AL55_RS16075;old_locus_tag=AL55_02124 NZ_KK316828.1 Protein Homology CDS 2315023 2315328 . - 0 ID=cds-WP_003410624.1;Parent=gene-AL55_RS16075;Dbxref=GenBank:WP_003410624.1;Name=WP_003410624.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216572.1;locus_tag=AL55_RS16075;product=30S ribosomal protein S14;protein_id=WP_003410624.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2315330 2315494 . - . ID=gene-AL55_RS16080;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AL55_RS16080;old_locus_tag=AL55_02125 NZ_KK316828.1 Protein Homology CDS 2315330 2315494 . - 0 ID=cds-WP_003905737.1;Parent=gene-AL55_RS16080;Dbxref=GenBank:WP_003905737.1;Name=WP_003905737.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005063154.1;locus_tag=AL55_RS16080;product=50S ribosomal protein L33;protein_id=WP_003905737.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2315494 2315730 . - . ID=gene-AL55_RS16085;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AL55_RS16085;old_locus_tag=AL55_02126 NZ_KK316828.1 Protein Homology CDS 2315494 2315730 . - 0 ID=cds-WP_003410631.1;Parent=gene-AL55_RS16085;Dbxref=GenBank:WP_003410631.1;Name=WP_003410631.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216574.1;locus_tag=AL55_RS16085;product=50S ribosomal protein L28;protein_id=WP_003410631.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2316128 2316817 . + . ID=gene-AL55_RS27705;Name=AL55_RS27705;end_range=2316817,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27705;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 2316128 2316817 . + 0 ID=cds-AL55_RS27705;Parent=gene-AL55_RS27705;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0046872;end_range=2316817,.;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013465.6;locus_tag=AL55_RS27705;partial=true;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2316948 2317349 . + . ID=gene-AL55_RS27710;Name=AL55_RS27710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27710;old_locus_tag=AL55_02128 NZ_KK316828.1 Protein Homology CDS 2316948 2317349 . + 0 ID=cds-WP_009937711.1;Parent=gene-AL55_RS27710;Dbxref=GenBank:WP_009937711.1;Name=WP_009937711.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013143.6;locus_tag=AL55_RS27710;product=metal ABC transporter permease;protein_id=WP_009937711.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2317350 2317754 . - . ID=gene-AL55_RS16095;Name=AL55_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16095;old_locus_tag=AL55_02129 NZ_KK316828.1 Protein Homology CDS 2317350 2317754 . - 0 ID=cds-WP_003410645.1;Parent=gene-AL55_RS16095;Dbxref=GenBank:WP_003410645.1;Name=WP_003410645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216577.1;locus_tag=AL55_RS16095;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003410645.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2317838 2321422 . - . ID=gene-AL55_RS16100;Name=cobN;gbkey=Gene;gene=cobN;gene_biotype=protein_coding;locus_tag=AL55_RS16100;old_locus_tag=AL55_02130 NZ_KK316828.1 Protein Homology CDS 2317838 2321422 . - 0 ID=cds-WP_003910889.1;Parent=gene-AL55_RS16100;Dbxref=GenBank:WP_003910889.1;Name=WP_003910889.1;Ontology_term=GO:0009236,GO:0051116;gbkey=CDS;gene=cobN;go_function=cobaltochelatase activity|0051116||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216578.1;locus_tag=AL55_RS16100;product=cobaltochelatase subunit CobN;protein_id=WP_003910889.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2321500 2321733 . + . ID=gene-AL55_RS16105;Name=mazE7;gbkey=Gene;gene=mazE7;gene_biotype=protein_coding;locus_tag=AL55_RS16105;old_locus_tag=AL55_02131 NZ_KK316828.1 Protein Homology CDS 2321500 2321733 . + 0 ID=cds-WP_003410651.1;Parent=gene-AL55_RS16105;Dbxref=GenBank:WP_003410651.1;Name=WP_003410651.1;gbkey=CDS;gene=mazE7;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177657.1;locus_tag=AL55_RS16105;product=type II toxin-antitoxin system antitoxin MazE7;protein_id=WP_003410651.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2321726 2322136 . + . ID=gene-AL55_RS16110;Name=mazF7;gbkey=Gene;gene=mazF7;gene_biotype=protein_coding;gene_synonym=mazF-mt9;locus_tag=AL55_RS16110;old_locus_tag=AL55_02132 NZ_KK316828.1 Protein Homology CDS 2321726 2322136 . + 0 ID=cds-WP_003410654.1;Parent=gene-AL55_RS16110;Dbxref=GenBank:WP_003410654.1;Name=WP_003410654.1;gbkey=CDS;gene=mazF7;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837055.2;locus_tag=AL55_RS16110;product=type II toxin-antitoxin system toxin endoribonuclease MazF7;protein_id=WP_003410654.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2322120 2323211 . + . ID=gene-AL55_RS16115;Name=cobG;gbkey=Gene;gene=cobG;gene_biotype=protein_coding;locus_tag=AL55_RS16115;old_locus_tag=AL55_02133 NZ_KK316828.1 Protein Homology CDS 2322120 2323211 . + 0 ID=cds-WP_003900454.1;Parent=gene-AL55_RS16115;Dbxref=GenBank:WP_003900454.1;Name=WP_003900454.1;Ontology_term=GO:0019250,GO:0016709;gbkey=CDS;gene=cobG;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=aerobic cobalamin biosynthetic process|0019250||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216580.1;locus_tag=AL55_RS16115;product=precorrin-3B synthase;protein_id=WP_003900454.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2323221 2323847 . + . ID=gene-AL55_RS16120;Name=cobH;gbkey=Gene;gene=cobH;gene_biotype=protein_coding;locus_tag=AL55_RS16120;old_locus_tag=AL55_02134 NZ_KK316828.1 Protein Homology CDS 2323221 2323847 . + 0 ID=cds-WP_003410658.1;Parent=gene-AL55_RS16120;Dbxref=GenBank:WP_003410658.1;Name=WP_003410658.1;Ontology_term=GO:0009236,GO:0016993;gbkey=CDS;gene=cobH;go_function=precorrin-8X methylmutase activity|0016993||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216581.1;locus_tag=AL55_RS16120;product=precorrin-8X methylmutase;protein_id=WP_003410658.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2323844 2325370 . + . ID=gene-AL55_RS16125;Name=cobI;gbkey=Gene;gene=cobI;gene_biotype=protein_coding;locus_tag=AL55_RS16125;old_locus_tag=AL55_02135 NZ_KK316828.1 Protein Homology CDS 2323844 2325370 . + 0 ID=cds-WP_003410659.1;Parent=gene-AL55_RS16125;Dbxref=GenBank:WP_003410659.1;Name=WP_003410659.1;Ontology_term=GO:0009236,GO:0030788;gbkey=CDS;gene=cobI;go_function=precorrin-2 C20-methyltransferase activity|0030788||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216582.1;locus_tag=AL55_RS16125;product=precorrin-2 C(20)-methyltransferase;protein_id=WP_003410659.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2325316 2326539 . - . ID=gene-AL55_RS16130;Name=AL55_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16130;old_locus_tag=AL55_02136 NZ_KK316828.1 Protein Homology CDS 2325316 2326539 . - 0 ID=cds-WP_003901321.1;Parent=gene-AL55_RS16130;Dbxref=GenBank:WP_003901321.1;Name=WP_003901321.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216583.1;locus_tag=AL55_RS16130;product=class I SAM-dependent methyltransferase;protein_id=WP_003901321.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2326555 2327478 . - . ID=gene-AL55_RS16135;Name=blaC;gbkey=Gene;gene=blaC;gene_biotype=protein_coding;locus_tag=AL55_RS16135;old_locus_tag=AL55_02137 NZ_KK316828.1 Protein Homology CDS 2326555 2327478 . - 0 ID=cds-WP_003410677.1;Parent=gene-AL55_RS16135;Dbxref=GenBank:WP_003410677.1;Name=WP_003410677.1;Ontology_term=GO:0008800;gbkey=CDS;gene=blaC;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410677.1;locus_tag=AL55_RS16135;product=class A beta-lactamase BlaC;protein_id=WP_003410677.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2327613 2328170 . + . ID=gene-AL55_RS16140;Name=sigC;gbkey=Gene;gene=sigC;gene_biotype=protein_coding;locus_tag=AL55_RS16140;old_locus_tag=AL55_02138 NZ_KK316828.1 Protein Homology CDS 2327613 2328170 . + 0 ID=cds-WP_003410678.1;Parent=gene-AL55_RS16140;Dbxref=GenBank:WP_003410678.1;Name=WP_003410678.1;gbkey=CDS;gene=sigC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216585.1;locus_tag=AL55_RS16140;product=RNA polymerase sigma factor SigC;protein_id=WP_003410678.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2328160 2328894 . - . ID=gene-AL55_RS16145;Name=cobK;gbkey=Gene;gene=cobK;gene_biotype=protein_coding;locus_tag=AL55_RS16145;old_locus_tag=AL55_02139 NZ_KK316828.1 Protein Homology CDS 2328160 2328894 . - 0 ID=cds-WP_003900455.1;Parent=gene-AL55_RS16145;Dbxref=GenBank:WP_003900455.1;Name=WP_003900455.1;Ontology_term=GO:0009236,GO:0016994;gbkey=CDS;gene=cobK;go_function=precorrin-6A reductase activity|0016994||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216586.1;locus_tag=AL55_RS16145;product=cobalt-precorrin-6A reductase;protein_id=WP_003900455.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2328891 2329646 . - . ID=gene-AL55_RS16150;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=AL55_RS16150;old_locus_tag=AL55_02140 NZ_KK316828.1 Protein Homology CDS 2328891 2329646 . - 0 ID=cds-WP_003410682.1;Parent=gene-AL55_RS16150;Dbxref=GenBank:WP_003410682.1;Name=WP_003410682.1;Ontology_term=GO:0009236,GO:0046026;gbkey=CDS;gene=cobM;go_function=precorrin-4 C11-methyltransferase activity|0046026||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216587.1;locus_tag=AL55_RS16150;product=precorrin-4 C(11)-methyltransferase;protein_id=WP_003410682.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2329643 2330815 . - . ID=gene-AL55_RS16155;Name=cobL;gbkey=Gene;gene=cobL;gene_biotype=protein_coding;locus_tag=AL55_RS16155;old_locus_tag=AL55_02141 NZ_KK316828.1 Protein Homology CDS 2329643 2330815 . - 0 ID=cds-WP_003899155.1;Parent=gene-AL55_RS16155;Dbxref=GenBank:WP_003899155.1;Name=WP_003899155.1;gbkey=CDS;gene=cobL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216588.1;locus_tag=AL55_RS16155;product=bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_003899155.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2330883 2331632 . - . ID=gene-AL55_RS16160;Name=AL55_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16160;old_locus_tag=AL55_02142 NZ_KK316828.1 Protein Homology CDS 2330883 2331632 . - 0 ID=cds-WP_003900457.1;Parent=gene-AL55_RS16160;Dbxref=GenBank:WP_003900457.1;Name=WP_003900457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216589.1;locus_tag=AL55_RS16160;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003900457.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2331662 2332075 . + . ID=gene-AL55_RS16165;Name=AL55_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16165;old_locus_tag=AL55_02143 NZ_KK316828.1 Protein Homology CDS 2331662 2332075 . + 0 ID=cds-WP_003899157.1;Parent=gene-AL55_RS16165;Dbxref=GenBank:WP_003899157.1;Name=WP_003899157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216590.1;locus_tag=AL55_RS16165;product=F420-dependent biliverdin reductase;protein_id=WP_003899157.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2332085 2333548 . - . ID=gene-AL55_RS16170;Name=AL55_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16170;old_locus_tag=AL55_02144 NZ_KK316828.1 Protein Homology CDS 2332085 2333548 . - 0 ID=cds-WP_003902116.1;Parent=gene-AL55_RS16170;Dbxref=GenBank:WP_003902116.1;Name=WP_003902116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216591.1;locus_tag=AL55_RS16170;product=phosphoinositide-specific phospholipase C-related protein;protein_id=WP_003902116.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2333992 2334963 . - . ID=gene-AL55_RS16180;Name=AL55_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16180;old_locus_tag=AL55_02146 NZ_KK316828.1 Protein Homology CDS 2333992 2334963 . - 0 ID=cds-WP_003899159.1;Parent=gene-AL55_RS16180;Dbxref=GenBank:WP_003899159.1;Name=WP_003899159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216593.1;locus_tag=AL55_RS16180;product=hypothetical protein;protein_id=WP_003899159.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2334964 2335263 . - . ID=gene-AL55_RS16185;Name=AL55_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16185;old_locus_tag=AL55_02147 NZ_KK316828.1 Protein Homology CDS 2334964 2335263 . - 0 ID=cds-WP_003410695.1;Parent=gene-AL55_RS16185;Dbxref=GenBank:WP_003410695.1;Name=WP_003410695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177658.1;locus_tag=AL55_RS16185;product=hypothetical protein;protein_id=WP_003410695.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2335728 2336042 . + . ID=gene-AL55_RS16190;Name=AL55_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16190;old_locus_tag=AL55_02149 NZ_KK316828.1 Protein Homology CDS 2335728 2336042 . + 0 ID=cds-WP_003410700.1;Parent=gene-AL55_RS16190;Dbxref=GenBank:WP_003410700.1;Name=WP_003410700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216594.1;locus_tag=AL55_RS16190;product=DUF2563 family protein;protein_id=WP_003410700.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2336024 2337994 . + . ID=gene-AL55_RS16195;Name=AL55_RS16195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS16195;old_locus_tag=AL55_02150;pseudo=true NZ_KK316828.1 Protein Homology CDS 2336024 2337994 . + 0 ID=cds-AL55_RS16195;Parent=gene-AL55_RS16195;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216595.1;locus_tag=AL55_RS16195;product=alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2337975 2338538 . + . ID=gene-AL55_RS16200;Name=AL55_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16200;old_locus_tag=AL55_02151 NZ_KK316828.1 Protein Homology CDS 2337975 2338538 . + 0 ID=cds-WP_003899161.1;Parent=gene-AL55_RS16200;Dbxref=GenBank:WP_003899161.1;Name=WP_003899161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216596.1;locus_tag=AL55_RS16200;product=hypothetical protein;protein_id=WP_003899161.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2338603 2338767 . + . ID=gene-AL55_RS27715;Name=AL55_RS27715;end_range=2338767,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27715;partial=true;pseudo=true;start_range=.,2338603 NZ_KK316828.1 Protein Homology CDS 2338603 2338767 . + 0 ID=cds-AL55_RS27715;Parent=gene-AL55_RS27715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2338767,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216598.1;locus_tag=AL55_RS27715;partial=true;product=DUF5631 domain-containing protein;pseudo=true;start_range=.,2338603;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2338734 2339115 . - . ID=gene-AL55_RS27720;Name=AL55_RS27720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27720;old_locus_tag=AL55_02152;pseudo=true NZ_KK316828.1 Protein Homology CDS 2338734 2339115 . - 0 ID=cds-AL55_RS27720;Parent=gene-AL55_RS27720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216597.1;locus_tag=AL55_RS27720;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2338997 2339389 . + . ID=gene-AL55_RS27330;Name=AL55_RS27330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27330 NZ_KK316828.1 Protein Homology CDS 2338997 2339389 . + 0 ID=cds-WP_223695514.1;Parent=gene-AL55_RS27330;Dbxref=GenBank:WP_223695514.1;Name=WP_223695514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909575.1;locus_tag=AL55_RS27330;product=hypothetical protein;protein_id=WP_223695514.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2339379 2341544 . + . ID=gene-AL55_RS16205;Name=AL55_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16205;old_locus_tag=AL55_02153 NZ_KK316828.1 Protein Homology CDS 2339379 2341544 . + 0 ID=cds-WP_003910892.1;Parent=gene-AL55_RS16205;Dbxref=GenBank:WP_003910892.1;Name=WP_003910892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216598.1;locus_tag=AL55_RS16205;product=DUF5631 domain-containing protein;protein_id=WP_003910892.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2341541 2342485 . + . ID=gene-AL55_RS16210;Name=AL55_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16210;old_locus_tag=AL55_02154 NZ_KK316828.1 Protein Homology CDS 2341541 2342485 . + 0 ID=cds-WP_003900461.1;Parent=gene-AL55_RS16210;Dbxref=GenBank:WP_003900461.1;Name=WP_003900461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216599.1;locus_tag=AL55_RS16210;product=hypothetical protein;protein_id=WP_003900461.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2342478 2343625 . + . ID=gene-AL55_RS16215;Name=AL55_RS16215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS16215;old_locus_tag=AL55_02155;pseudo=true NZ_KK316828.1 Protein Homology CDS 2342478 2343625 . + 0 ID=cds-AL55_RS16215;Parent=gene-AL55_RS16215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216600.1;locus_tag=AL55_RS16215;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2343828 2344905 . + . ID=gene-AL55_RS27725;Name=AL55_RS27725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27725;partial=true;pseudo=true;start_range=.,2343828 NZ_KK316828.1 Protein Homology CDS 2343828 2344905 . + 0 ID=cds-AL55_RS27725;Parent=gene-AL55_RS27725;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611776.1;locus_tag=AL55_RS27725;partial=true;product=IS3-like element ISMyma10 family transposase;pseudo=true;start_range=.,2343828;transl_table=11 NZ_KK316828.1 RefSeq gene 2345092 2346861 . + . ID=gene-AL55_RS16235;Name=pknJ;gbkey=Gene;gene=pknJ;gene_biotype=protein_coding;locus_tag=AL55_RS16235;old_locus_tag=AL55_02159 NZ_KK316828.1 Protein Homology CDS 2345092 2346861 . + 0 ID=cds-WP_003905749.1;Parent=gene-AL55_RS16235;Dbxref=GenBank:WP_003905749.1;Name=WP_003905749.1;gbkey=CDS;gene=pknJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216604.1;locus_tag=AL55_RS16235;product=serine/threonine protein kinase PknJ;protein_id=WP_003905749.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2346878 2348005 . - . ID=gene-AL55_RS16240;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=AL55_RS16240;old_locus_tag=AL55_02160 NZ_KK316828.1 Protein Homology CDS 2346878 2348005 . - 0 ID=cds-WP_003905750.1;Parent=gene-AL55_RS16240;Dbxref=GenBank:WP_003905750.1;Name=WP_003905750.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;gene=pepE;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216605.1;locus_tag=AL55_RS16240;product=M24 family metallopeptidase;protein_id=WP_003905750.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2348279 2349235 . + . ID=gene-AL55_RS16245;Name=AL55_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16245;old_locus_tag=AL55_02161 NZ_KK316828.1 Protein Homology CDS 2348279 2349235 . + 0 ID=cds-WP_003410750.1;Parent=gene-AL55_RS16245;Dbxref=GenBank:WP_003410750.1;Name=WP_003410750.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016705407.1;locus_tag=AL55_RS16245;product=5'-3' exonuclease;protein_id=WP_003410750.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2349239 2349973 . - . ID=gene-AL55_RS16250;Name=AL55_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16250;old_locus_tag=AL55_02162 NZ_KK316828.1 Protein Homology CDS 2349239 2349973 . - 0 ID=cds-WP_003410762.1;Parent=gene-AL55_RS16250;Dbxref=GenBank:WP_003410762.1;Name=WP_003410762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216607.1;locus_tag=AL55_RS16250;product=DUF4333 domain-containing protein;protein_id=WP_003410762.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2350015 2352735 . - . ID=gene-AL55_RS16255;Name=helY;gbkey=Gene;gene=helY;gene_biotype=protein_coding;locus_tag=AL55_RS16255;old_locus_tag=AL55_02163 NZ_KK316828.1 Protein Homology CDS 2350015 2352735 . - 0 ID=cds-WP_003899167.1;Parent=gene-AL55_RS16255;Dbxref=GenBank:WP_003899167.1;Name=WP_003899167.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=helY;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216608.1;locus_tag=AL55_RS16255;product=DEAD/DEAH box helicase;protein_id=WP_003899167.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2352852 2353778 . - . ID=gene-AL55_RS16260;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=AL55_RS16260;old_locus_tag=AL55_02164 NZ_KK316828.1 Protein Homology CDS 2352852 2353778 . - 0 ID=cds-WP_003410764.1;Parent=gene-AL55_RS16260;Dbxref=GenBank:WP_003410764.1;Name=WP_003410764.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216609.1;locus_tag=AL55_RS16260;product=twin-arginine translocase subunit TatC;protein_id=WP_003410764.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2353795 2354046 . - . ID=gene-AL55_RS16265;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AL55_RS16265;old_locus_tag=AL55_02165 NZ_KK316828.1 Protein Homology CDS 2353795 2354046 . - 0 ID=cds-WP_003410768.1;Parent=gene-AL55_RS16265;Dbxref=GenBank:WP_003410768.1;Name=WP_003410768.1;Ontology_term=GO:0043953,GO:0016020;gbkey=CDS;gene=tatA;go_component=membrane|0016020||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216610.1;locus_tag=AL55_RS16265;product=Sec-independent protein translocase subunit TatA;protein_id=WP_003410768.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2354114 2355064 . - . ID=gene-AL55_RS16270;Name=pafC;gbkey=Gene;gene=pafC;gene_biotype=protein_coding;locus_tag=AL55_RS16270;old_locus_tag=AL55_02166 NZ_KK316828.1 Protein Homology CDS 2354114 2355064 . - 0 ID=cds-WP_003410772.1;Parent=gene-AL55_RS16270;Dbxref=GenBank:WP_003410772.1;Name=WP_003410772.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=pafC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216611.1;locus_tag=AL55_RS16270;product=helix-turn-helix transcriptional regulator;protein_id=WP_003410772.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2355061 2356059 . - . ID=gene-AL55_RS16275;Name=pafB;gbkey=Gene;gene=pafB;gene_biotype=protein_coding;locus_tag=AL55_RS16275;old_locus_tag=AL55_02167 NZ_KK316828.1 Protein Homology CDS 2355061 2356059 . - 0 ID=cds-WP_003902122.1;Parent=gene-AL55_RS16275;Dbxref=GenBank:WP_003902122.1;Name=WP_003902122.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=pafB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216612.1;locus_tag=AL55_RS16275;product=helix-turn-helix transcriptional regulator;protein_id=WP_003902122.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2356068 2357426 . - . ID=gene-AL55_RS16280;Name=pafA;gbkey=Gene;gene=pafA;gene_biotype=protein_coding;locus_tag=AL55_RS16280;old_locus_tag=AL55_02168 NZ_KK316828.1 Protein Homology CDS 2356068 2357426 . - 0 ID=cds-WP_003410781.1;Parent=gene-AL55_RS16280;Dbxref=GenBank:WP_003410781.1;Name=WP_003410781.1;Ontology_term=GO:0010498,GO:0019941,GO:0070490,GO:0016879;gbkey=CDS;gene=pafA;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=proteasomal protein catabolic process|0010498||IEA,modification-dependent protein catabolic process|0019941||IEA,protein pupylation|0070490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216613.1;locus_tag=AL55_RS16280;product=Pup--protein ligase;protein_id=WP_003410781.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2357478 2358953 . - . ID=gene-AL55_RS0104975;Name=AL55_RS0104975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104975;old_locus_tag=AL55_02169 NZ_KK316828.1 Protein Homology CDS 2357478 2358953 . - 0 ID=cds-WP_003410786.1;Parent=gene-AL55_RS0104975;Dbxref=GenBank:WP_003410786.1;Name=WP_003410786.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410786.1;locus_tag=AL55_RS0104975;product=PE family protein;protein_id=WP_003410786.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2359250 2360788 . + . ID=gene-AL55_RS16285;Name=AL55_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16285;old_locus_tag=AL55_02171 NZ_KK316828.1 Protein Homology CDS 2359250 2360788 . + 0 ID=cds-WP_023637436.1;Parent=gene-AL55_RS16285;Dbxref=GenBank:WP_023637436.1;Name=WP_023637436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003926636.1;locus_tag=AL55_RS16285;product=HNH endonuclease signature motif containing protein;protein_id=WP_023637436.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2360987 2364028 . + . ID=gene-AL55_RS16290;Name=helZ;gbkey=Gene;gene=helZ;gene_biotype=protein_coding;locus_tag=AL55_RS16290;old_locus_tag=AL55_02172 NZ_KK316828.1 Protein Homology CDS 2360987 2364028 . + 0 ID=cds-WP_003899171.1;Parent=gene-AL55_RS16290;Dbxref=GenBank:WP_003899171.1;Name=WP_003899171.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=helZ;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216617.2;locus_tag=AL55_RS16290;product=DEAD/DEAH box helicase;protein_id=WP_003899171.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2364021 2364854 . + . ID=gene-AL55_RS16295;Name=AL55_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16295;old_locus_tag=AL55_02173 NZ_KK316828.1 Protein Homology CDS 2364021 2364854 . + 0 ID=cds-WP_003899172.1;Parent=gene-AL55_RS16295;Dbxref=GenBank:WP_003899172.1;Name=WP_003899172.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351184.1;locus_tag=AL55_RS16295;product=SWIM zinc finger family protein;protein_id=WP_003899172.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2364833 2365267 . - . ID=gene-AL55_RS16300;Name=AL55_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16300;old_locus_tag=AL55_02174 NZ_KK316828.1 Protein Homology CDS 2364833 2365267 . - 0 ID=cds-WP_003905754.1;Parent=gene-AL55_RS16300;Dbxref=GenBank:WP_003905754.1;Name=WP_003905754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216619.1;locus_tag=AL55_RS16300;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003905754.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2365274 2365528 . - . ID=gene-AL55_RS16305;Name=AL55_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16305;old_locus_tag=AL55_02175 NZ_KK316828.1 Protein Homology CDS 2365274 2365528 . - 0 ID=cds-WP_003410814.1;Parent=gene-AL55_RS16305;Dbxref=GenBank:WP_003410814.1;Name=WP_003410814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216620.1;locus_tag=AL55_RS16305;product=antitoxin;protein_id=WP_003410814.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2365544 2365801 . - . ID=gene-AL55_RS0104980;Name=AL55_RS0104980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104980 NZ_KK316828.1 Protein Homology CDS 2365544 2365801 . - 0 ID=cds-WP_003410816.1;Parent=gene-AL55_RS0104980;Dbxref=GenBank:WP_003410816.1;Name=WP_003410816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030035.1;locus_tag=AL55_RS0104980;product=hypothetical protein;protein_id=WP_003410816.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2366335 2367596 . + . ID=gene-AL55_RS16315;Name=AL55_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16315;old_locus_tag=AL55_02177 NZ_KK316828.1 Protein Homology CDS 2366335 2366623 . + 0 ID=cds-WP_087902221.1-8;Parent=gene-AL55_RS16315;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS16315;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 2366623 2367596 . + 2 ID=cds-WP_087902221.1-8;Parent=gene-AL55_RS16315;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS16315;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2368106 2368402 . + . ID=gene-AL55_RS16320;Name=AL55_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16320;old_locus_tag=AL55_02178 NZ_KK316828.1 Protein Homology CDS 2368106 2368402 . + 0 ID=cds-WP_003410820.1;Parent=gene-AL55_RS16320;Dbxref=GenBank:WP_003410820.1;Name=WP_003410820.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177858.1;locus_tag=AL55_RS16320;product=PE family protein;protein_id=WP_003410820.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2368458 2369189 . + . ID=gene-AL55_RS16325;Name=AL55_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16325;old_locus_tag=AL55_02179 NZ_KK316828.1 Protein Homology CDS 2368458 2369189 . + 0 ID=cds-WP_003900467.1;Parent=gene-AL55_RS16325;Dbxref=GenBank:WP_003900467.1;Name=WP_003900467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177859.1;locus_tag=AL55_RS16325;product=PPE family protein;protein_id=WP_003900467.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2369729 2370475 . - . ID=gene-AL55_RS16330;Name=prcA;gbkey=Gene;gene=prcA;gene_biotype=protein_coding;locus_tag=AL55_RS16330;old_locus_tag=AL55_02180 NZ_KK316828.1 Protein Homology CDS 2369729 2370475 . - 0 ID=cds-WP_003901330.1;Parent=gene-AL55_RS16330;Dbxref=GenBank:WP_003901330.1;Name=WP_003901330.1;Ontology_term=GO:0051603,GO:0004298,GO:0019773;gbkey=CDS;gene=prcA;go_component=proteasome core complex%2C alpha-subunit complex|0019773||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216625.1;locus_tag=AL55_RS16330;product=proteasome subunit alpha;protein_id=WP_003901330.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2370472 2371347 . - . ID=gene-AL55_RS16335;Name=prcB;gbkey=Gene;gene=prcB;gene_biotype=protein_coding;locus_tag=AL55_RS16335;old_locus_tag=AL55_02181 NZ_KK316828.1 Protein Homology CDS 2370472 2371347 . - 0 ID=cds-WP_003411023.1;Parent=gene-AL55_RS16335;Dbxref=GenBank:WP_003411023.1;Name=WP_003411023.1;Ontology_term=GO:0010498,GO:0004298,GO:0005839;gbkey=CDS;gene=prcB;go_component=proteasome core complex|0005839||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteasomal protein catabolic process|0010498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216626.1;locus_tag=AL55_RS16335;product=proteasome subunit beta;protein_id=WP_003411023.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2371344 2371538 . - . ID=gene-AL55_RS16340;Name=pup;gbkey=Gene;gene=pup;gene_biotype=protein_coding;locus_tag=AL55_RS16340;old_locus_tag=AL55_02182 NZ_KK316828.1 Protein Homology CDS 2371344 2371538 . - 0 ID=cds-WP_003411026.1;Parent=gene-AL55_RS16340;Dbxref=GenBank:WP_003411026.1;Name=WP_003411026.1;Ontology_term=GO:0010498,GO:0019941,GO:0070490,GO:0031386,GO:0070628;gbkey=CDS;gene=pup;go_function=protein tag activity|0031386||IEA,proteasome binding|0070628||IEA;go_process=proteasomal protein catabolic process|0010498||IEA,modification-dependent protein catabolic process|0019941||IEA,protein pupylation|0070490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003887572.1;locus_tag=AL55_RS16340;product=ubiquitin-like protein Pup;protein_id=WP_003411026.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2371651 2373168 . - . ID=gene-AL55_RS16345;Name=dop;gbkey=Gene;gene=dop;gene_biotype=protein_coding;locus_tag=AL55_RS16345;old_locus_tag=AL55_02183 NZ_KK316828.1 Protein Homology CDS 2371651 2373168 . - 0 ID=cds-WP_003411029.1;Parent=gene-AL55_RS16345;Dbxref=GenBank:WP_003411029.1;Name=WP_003411029.1;gbkey=CDS;gene=dop;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411029.1;locus_tag=AL55_RS16345;product=pup deamidase/depupylase;protein_id=WP_003411029.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2373376 2374569 . + . ID=gene-AL55_RS16350;Name=AL55_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16350;old_locus_tag=AL55_02184 NZ_KK316828.1 Protein Homology CDS 2373376 2374569 . + 0 ID=cds-WP_003411031.1;Parent=gene-AL55_RS16350;Dbxref=GenBank:WP_003411031.1;Name=WP_003411031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216629.1;locus_tag=AL55_RS16350;product=integral membrane protein;protein_id=WP_003411031.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2374580 2375203 . + . ID=gene-AL55_RS16355;Name=AL55_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16355;old_locus_tag=AL55_02185 NZ_KK316828.1 Protein Homology CDS 2374580 2375203 . + 0 ID=cds-WP_003411033.1;Parent=gene-AL55_RS16355;Dbxref=GenBank:WP_003411033.1;Name=WP_003411033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216630.1;locus_tag=AL55_RS16355;product=hypothetical protein;protein_id=WP_003411033.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2375207 2377036 . - . ID=gene-AL55_RS16360;Name=arc;gbkey=Gene;gene=arc;gene_biotype=protein_coding;locus_tag=AL55_RS16360;old_locus_tag=AL55_02186 NZ_KK316828.1 Protein Homology CDS 2375207 2377036 . - 0 ID=cds-WP_003411035.1;Parent=gene-AL55_RS16360;Dbxref=GenBank:WP_003411035.1;Name=WP_003411035.1;Ontology_term=GO:0010498,GO:0019941,GO:0016887,GO:0000502;gbkey=CDS;gene=arc;go_component=proteasome complex|0000502||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=proteasomal protein catabolic process|0010498||IEA,modification-dependent protein catabolic process|0019941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216631.1;locus_tag=AL55_RS16360;product=proteasome ATPase;protein_id=WP_003411035.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2377317 2377886 . + . ID=gene-AL55_RS16365;Name=AL55_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16365;old_locus_tag=AL55_02187 NZ_KK316828.1 Protein Homology CDS 2377317 2377886 . + 0 ID=cds-WP_003900470.1;Parent=gene-AL55_RS16365;Dbxref=GenBank:WP_003900470.1;Name=WP_003900470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216632.1;locus_tag=AL55_RS16365;product=lipoprotein LppK;protein_id=WP_003900470.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2377894 2378187 . + . ID=gene-AL55_RS16370;Name=AL55_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16370;old_locus_tag=AL55_02188 NZ_KK316828.1 Protein Homology CDS 2377894 2378187 . + 0 ID=cds-WP_003411038.1;Parent=gene-AL55_RS16370;Dbxref=GenBank:WP_003411038.1;Name=WP_003411038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216633.1;locus_tag=AL55_RS16370;product=DUF503 domain-containing protein;protein_id=WP_003411038.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2378216 2379058 . - . ID=gene-AL55_RS16375;Name=trmI;gbkey=Gene;gene=trmI;gene_biotype=protein_coding;locus_tag=AL55_RS16375;old_locus_tag=AL55_02189 NZ_KK316828.1 Protein Homology CDS 2378216 2379058 . - 0 ID=cds-WP_003411041.1;Parent=gene-AL55_RS16375;Dbxref=GenBank:WP_003411041.1;Name=WP_003411041.1;gbkey=CDS;gene=trmI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216634.1;locus_tag=AL55_RS16375;product=tRNA (adenine(58)-N(1))-methyltransferase TrmI;protein_id=WP_003411041.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2379132 2379968 . + . ID=gene-AL55_RS16380;Name=AL55_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16380;old_locus_tag=AL55_02190 NZ_KK316828.1 Protein Homology CDS 2379132 2379968 . + 0 ID=cds-WP_003899178.1;Parent=gene-AL55_RS16380;Dbxref=GenBank:WP_003899178.1;Name=WP_003899178.1;Ontology_term=GO:0003677,GO:0003678,GO:0004518,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,nuclease activity|0004518||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216635.1;locus_tag=AL55_RS16380;product=RecB family exonuclease;protein_id=WP_003899178.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2379991 2380473 . - . ID=gene-AL55_RS16385;Name=AL55_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16385;old_locus_tag=AL55_02191 NZ_KK316828.1 Protein Homology CDS 2379991 2380473 . - 0 ID=cds-WP_003900471.1;Parent=gene-AL55_RS16385;Dbxref=GenBank:WP_003900471.1;Name=WP_003900471.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216636.1;locus_tag=AL55_RS16385;product=glycine zipper 2TM domain-containing protein;protein_id=WP_003900471.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2380552 2381406 . - . ID=gene-AL55_RS16390;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AL55_RS16390;old_locus_tag=AL55_02192 NZ_KK316828.1 Protein Homology CDS 2380552 2381406 . - 0 ID=cds-WP_003411047.1;Parent=gene-AL55_RS16390;Dbxref=GenBank:WP_003411047.1;Name=WP_003411047.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216637.1;locus_tag=AL55_RS16390;product=ATP phosphoribosyltransferase;protein_id=WP_003411047.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2381409 2381690 . - . ID=gene-AL55_RS16395;Name=hisE;gbkey=Gene;gene=hisE;gene_biotype=protein_coding;locus_tag=AL55_RS16395;old_locus_tag=AL55_02193 NZ_KK316828.1 Protein Homology CDS 2381409 2381690 . - 0 ID=cds-WP_003899180.1;Parent=gene-AL55_RS16395;Dbxref=GenBank:WP_003899180.1;Name=WP_003899180.1;Ontology_term=GO:0004636;gbkey=CDS;gene=hisE;go_function=phosphoribosyl-ATP diphosphatase activity|0004636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177860.1;locus_tag=AL55_RS16395;product=phosphoribosyl-ATP diphosphatase;protein_id=WP_003899180.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2381817 2383237 . + . ID=gene-AL55_RS26125;Name=AL55_RS26125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS26125;pseudo=true NZ_KK316828.1 Protein Homology CDS 2381817 2383237 . + 0 ID=cds-AL55_RS26125;Parent=gene-AL55_RS26125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177861.1;locus_tag=AL55_RS26125;product=PPE domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2383234 2386812 . - . ID=gene-AL55_RS16405;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=AL55_RS16405;old_locus_tag=AL55_02195 NZ_KK316828.1 Protein Homology CDS 2383234 2386812 . - 0 ID=cds-WP_003900472.1;Parent=gene-AL55_RS16405;Dbxref=GenBank:WP_003900472.1;Name=WP_003900472.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216640.1;locus_tag=AL55_RS16405;product=methionine synthase;protein_id=WP_003900472.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2387038 2387916 . + . ID=gene-AL55_RS16410;Name=AL55_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16410;old_locus_tag=AL55_02196 NZ_KK316828.1 Protein Homology CDS 2387038 2387916 . + 0 ID=cds-WP_003411060.1;Parent=gene-AL55_RS16410;Dbxref=GenBank:WP_003411060.1;Name=WP_003411060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216641.1;locus_tag=AL55_RS16410;product=PAC2 family protein;protein_id=WP_003411060.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2387947 2388717 . - . ID=gene-AL55_RS0104990;Name=AL55_RS0104990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0104990;old_locus_tag=AL55_02197 NZ_KK316828.1 Protein Homology CDS 2387947 2388717 . - 0 ID=cds-WP_003411064.1;Parent=gene-AL55_RS0104990;Dbxref=GenBank:WP_003411064.1;Name=WP_003411064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177862.1;locus_tag=AL55_RS0104990;product=PGRS repeat-containing protein;protein_id=WP_003411064.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2388714 2388920 . - . ID=gene-AL55_RS27925;Name=AL55_RS27925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27925 NZ_KK316828.1 Protein Homology CDS 2388714 2388920 . - 0 ID=cds-WP_050167243.1;Parent=gene-AL55_RS27925;Dbxref=GenBank:WP_050167243.1;Name=WP_050167243.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL55_RS27925;product=PE family protein;protein_id=WP_050167243.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2389361 2390830 . + . ID=gene-AL55_RS16415;Name=AL55_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16415;old_locus_tag=AL55_02198 NZ_KK316828.1 Protein Homology CDS 2389361 2390830 . + 0 ID=cds-WP_003411072.1;Parent=gene-AL55_RS16415;Dbxref=GenBank:WP_003411072.1;Name=WP_003411072.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177863.1;locus_tag=AL55_RS16415;product=amino acid permease;protein_id=WP_003411072.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2390830 2391033 . + . ID=gene-AL55_RS16420;Name=AL55_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16420;old_locus_tag=AL55_02199 NZ_KK316828.1 Protein Homology CDS 2390830 2391033 . + 0 ID=cds-WP_003411082.1;Parent=gene-AL55_RS16420;Dbxref=GenBank:WP_003411082.1;Name=WP_003411082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216644.1;locus_tag=AL55_RS16420;product=hypothetical protein;protein_id=WP_003411082.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2391053 2391934 . - . ID=gene-AL55_RS16425;Name=AL55_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16425;old_locus_tag=AL55_02200 NZ_KK316828.1 Protein Homology CDS 2391053 2391934 . - 0 ID=cds-WP_003411086.1;Parent=gene-AL55_RS16425;Dbxref=GenBank:WP_003411086.1;Name=WP_003411086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216645.1;locus_tag=AL55_RS16425;product=SDR family oxidoreductase;protein_id=WP_003411086.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2391960 2393204 . - . ID=gene-AL55_RS16430;Name=mshC;gbkey=Gene;gene=mshC;gene_biotype=protein_coding;locus_tag=AL55_RS16430;old_locus_tag=AL55_02201 NZ_KK316828.1 Protein Homology CDS 2391960 2393204 . - 0 ID=cds-WP_003411091.1;Parent=gene-AL55_RS16430;Dbxref=GenBank:WP_003411091.1;Name=WP_003411091.1;Ontology_term=GO:0010125,GO:0035446;gbkey=CDS;gene=mshC;go_function=cysteine-glucosaminylinositol ligase activity|0035446||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216646.1;locus_tag=AL55_RS16430;product=cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase;protein_id=WP_003411091.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2393262 2394065 . - . ID=gene-AL55_RS16435;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=AL55_RS16435;old_locus_tag=AL55_02202 NZ_KK316828.1 Protein Homology CDS 2393262 2394065 . - 0 ID=cds-WP_003411096.1;Parent=gene-AL55_RS16435;Dbxref=GenBank:WP_003411096.1;Name=WP_003411096.1;gbkey=CDS;gene=cysQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216647.1;locus_tag=AL55_RS16435;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_003411096.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2394156 2394386 . + . ID=gene-AL55_RS16440;Name=AL55_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16440;old_locus_tag=AL55_02203 NZ_KK316828.1 Protein Homology CDS 2394156 2394386 . + 0 ID=cds-WP_003411099.1;Parent=gene-AL55_RS16440;Dbxref=GenBank:WP_003411099.1;Name=WP_003411099.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216648.1;locus_tag=AL55_RS16440;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003411099.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2394596 2395411 . - . ID=gene-AL55_RS16445;Name=AL55_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16445;old_locus_tag=AL55_02204 NZ_KK316828.1 Protein Homology CDS 2394596 2395411 . - 0 ID=cds-WP_003900473.1;Parent=gene-AL55_RS16445;Dbxref=GenBank:WP_003900473.1;Name=WP_003900473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019306174.1;locus_tag=AL55_RS16445;product=SCO1664 family protein;protein_id=WP_003900473.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2395395 2395982 . - . ID=gene-AL55_RS16450;Name=AL55_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16450;old_locus_tag=AL55_02205 NZ_KK316828.1 Protein Homology CDS 2395395 2395982 . - 0 ID=cds-WP_003411102.1;Parent=gene-AL55_RS16450;Dbxref=GenBank:WP_003411102.1;Name=WP_003411102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007170405.1;locus_tag=AL55_RS16450;product=DUF3090 domain-containing protein;protein_id=WP_003411102.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2396046 2396756 . - . ID=gene-AL55_RS16455;Name=AL55_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16455;old_locus_tag=AL55_02206 NZ_KK316828.1 Protein Homology CDS 2396046 2396756 . - 0 ID=cds-WP_003411103.1;Parent=gene-AL55_RS16455;Dbxref=GenBank:WP_003411103.1;Name=WP_003411103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216651.1;locus_tag=AL55_RS16455;product=histidine phosphatase family protein;protein_id=WP_003411103.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2396753 2397583 . - . ID=gene-AL55_RS16460;Name=AL55_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16460;old_locus_tag=AL55_02207 NZ_KK316828.1 Protein Homology CDS 2396753 2397583 . - 0 ID=cds-WP_003411105.1;Parent=gene-AL55_RS16460;Dbxref=GenBank:WP_003411105.1;Name=WP_003411105.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216652.1;locus_tag=AL55_RS16460;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_003411105.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2397647 2397955 . - . ID=gene-AL55_RS0105005;Name=AL55_RS0105005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105005;old_locus_tag=AL55_02208 NZ_KK316828.1 Protein Homology CDS 2397647 2397955 . - 0 ID=cds-WP_003899184.1;Parent=gene-AL55_RS0105005;Dbxref=GenBank:WP_003899184.1;Name=WP_003899184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872207.1;locus_tag=AL55_RS0105005;product=hypothetical protein;protein_id=WP_003899184.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2398075 2399151 . + . ID=gene-AL55_RS16465;Name=lppL;gbkey=Gene;gene=lppL;gene_biotype=protein_coding;locus_tag=AL55_RS16465;old_locus_tag=AL55_02209 NZ_KK316828.1 Protein Homology CDS 2398075 2399151 . + 0 ID=cds-WP_003411110.1;Parent=gene-AL55_RS16465;Dbxref=GenBank:WP_003411110.1;Name=WP_003411110.1;gbkey=CDS;gene=lppL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216654.1;locus_tag=AL55_RS16465;product=YncE family protein;protein_id=WP_003411110.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2399148 2399429 . + . ID=gene-AL55_RS0105010;Name=AL55_RS0105010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105010 NZ_KK316828.1 Protein Homology CDS 2399148 2399429 . + 0 ID=cds-WP_003411112.1;Parent=gene-AL55_RS0105010;Dbxref=GenBank:WP_003411112.1;Name=WP_003411112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019283661.1;locus_tag=AL55_RS0105010;product=DUF5703 family protein;protein_id=WP_003411112.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2399465 2400538 . + . ID=gene-AL55_RS16470;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=AL55_RS16470;old_locus_tag=AL55_02210 NZ_KK316828.1 Protein Homology CDS 2399465 2400538 . + 0 ID=cds-WP_003901338.1;Parent=gene-AL55_RS16470;Dbxref=GenBank:WP_003901338.1;Name=WP_003901338.1;Ontology_term=GO:0006207,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216655.1;locus_tag=AL55_RS16470;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_003901338.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2400543 2401073 . - . ID=gene-AL55_RS16475;Name=AL55_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16475;old_locus_tag=AL55_02211 NZ_KK316828.1 Protein Homology CDS 2400543 2401073 . - 0 ID=cds-WP_003411119.1;Parent=gene-AL55_RS16475;Dbxref=GenBank:WP_003411119.1;Name=WP_003411119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216656.1;locus_tag=AL55_RS16475;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_003411119.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2401121 2402467 . - . ID=gene-AL55_RS16480;Name=AL55_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16480;old_locus_tag=AL55_02212 NZ_KK316828.1 Protein Homology CDS 2401121 2402467 . - 0 ID=cds-WP_003411121.1;Parent=gene-AL55_RS16480;Dbxref=GenBank:WP_003411121.1;Name=WP_003411121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177864.1;locus_tag=AL55_RS16480;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_003411121.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2402732 2402817 . + . ID=gene-AL55_RS16485;Name=AL55_RS16485;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS16485;old_locus_tag=AL55_02213 NZ_KK316828.1 tRNAscan-SE tRNA 2402732 2402817 . + . ID=rna-AL55_RS16485;Parent=gene-AL55_RS16485;anticodon=(pos:2402765..2402767);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS16485;product=tRNA-Leu NZ_KK316828.1 tRNAscan-SE exon 2402732 2402817 . + . ID=exon-AL55_RS16485-1;Parent=rna-AL55_RS16485;anticodon=(pos:2402765..2402767);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS16485;product=tRNA-Leu NZ_KK316828.1 RefSeq gene 2402938 2403255 . - . ID=gene-AL55_RS16490;Name=AL55_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16490;old_locus_tag=AL55_02214 NZ_KK316828.1 Protein Homology CDS 2402938 2403255 . - 0 ID=cds-WP_003411124.1;Parent=gene-AL55_RS16490;Dbxref=GenBank:WP_003411124.1;Name=WP_003411124.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216658.1;locus_tag=AL55_RS16490;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003411124.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2403252 2403467 . - . ID=gene-AL55_RS16495;Name=AL55_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16495;old_locus_tag=AL55_02215 NZ_KK316828.1 Protein Homology CDS 2403252 2403467 . - 0 ID=cds-WP_003411127.1;Parent=gene-AL55_RS16495;Dbxref=GenBank:WP_003411127.1;Name=WP_003411127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410825.1;locus_tag=AL55_RS16495;product=antitoxin ParD2;protein_id=WP_003411127.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2403722 2404780 . + . ID=gene-AL55_RS0105015;Name=AL55_RS0105015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105015;old_locus_tag=AL55_02216 NZ_KK316828.1 Protein Homology CDS 2403722 2404780 . + 0 ID=cds-WP_003411129.1;Parent=gene-AL55_RS0105015;Dbxref=GenBank:WP_003411129.1;Name=WP_003411129.1;Ontology_term=GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216659.1;locus_tag=AL55_RS0105015;product=phosphoribosyltransferase;protein_id=WP_003411129.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2404910 2405266 . - . ID=gene-AL55_RS16500;Name=AL55_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16500;old_locus_tag=AL55_02217 NZ_KK316828.1 Protein Homology CDS 2404910 2405266 . - 0 ID=cds-WP_003411130.1;Parent=gene-AL55_RS16500;Dbxref=GenBank:WP_003411130.1;Name=WP_003411130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216660.1;locus_tag=AL55_RS16500;product=hypothetical protein;protein_id=WP_003411130.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2405361 2406143 . - . ID=gene-AL55_RS16505;Name=wag31;gbkey=Gene;gene=wag31;gene_biotype=protein_coding;locus_tag=AL55_RS16505;old_locus_tag=AL55_02218 NZ_KK316828.1 Protein Homology CDS 2405361 2406143 . - 0 ID=cds-WP_003411131.1;Parent=gene-AL55_RS16505;Dbxref=GenBank:WP_003411131.1;Name=WP_003411131.1;gbkey=CDS;gene=wag31;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216661.1;locus_tag=AL55_RS16505;product=DivIVA-like cell division protein Wag31;protein_id=WP_003411131.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2406411 2406701 . - . ID=gene-AL55_RS16510;Name=AL55_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16510;old_locus_tag=AL55_02219 NZ_KK316828.1 Protein Homology CDS 2406411 2406701 . - 0 ID=cds-WP_003900476.1;Parent=gene-AL55_RS16510;Dbxref=GenBank:WP_003900476.1;Name=WP_003900476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216662.1;locus_tag=AL55_RS16510;product=YggT family protein;protein_id=WP_003900476.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2406863 2407519 . - . ID=gene-AL55_RS16515;Name=sepF;gbkey=Gene;gene=sepF;gene_biotype=protein_coding;locus_tag=AL55_RS16515;old_locus_tag=AL55_02220 NZ_KK316828.1 Protein Homology CDS 2406863 2407519 . - 0 ID=cds-WP_003411133.1;Parent=gene-AL55_RS16515;Dbxref=GenBank:WP_003411133.1;Name=WP_003411133.1;gbkey=CDS;gene=sepF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878111.1;locus_tag=AL55_RS16515;product=cell division protein SepF;protein_id=WP_003411133.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2407581 2408360 . - . ID=gene-AL55_RS0105020;Name=AL55_RS0105020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105020;old_locus_tag=AL55_02221 NZ_KK316828.1 Protein Homology CDS 2407581 2408360 . - 0 ID=cds-WP_015575160.1;Parent=gene-AL55_RS0105020;Dbxref=GenBank:WP_015575160.1;Name=WP_015575160.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015575160.1;locus_tag=AL55_RS0105020;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_015575160.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2408366 2409073 . - . ID=gene-AL55_RS16520;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=AL55_RS16520;old_locus_tag=AL55_02222 NZ_KK316828.1 Protein Homology CDS 2408366 2409073 . - 0 ID=cds-WP_003911777.1;Parent=gene-AL55_RS16520;Dbxref=GenBank:WP_003911777.1;Name=WP_003911777.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911777.1;locus_tag=AL55_RS16520;product=peptidoglycan editing factor PgeF;protein_id=WP_003911777.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2409129 2410268 . - . ID=gene-AL55_RS16525;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AL55_RS16525;old_locus_tag=AL55_02223 NZ_KK316828.1 Protein Homology CDS 2409129 2410268 . - 0 ID=cds-WP_003411144.1;Parent=gene-AL55_RS16525;Dbxref=GenBank:WP_003411144.1;Name=WP_003411144.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216666.1;locus_tag=AL55_RS16525;product=cell division protein FtsZ;protein_id=WP_003411144.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2410441 2411385 . - . ID=gene-AL55_RS16530;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=AL55_RS16530;old_locus_tag=AL55_02224 NZ_KK316828.1 Protein Homology CDS 2410441 2411385 . - 0 ID=cds-WP_003411157.1;Parent=gene-AL55_RS16530;Dbxref=GenBank:WP_003411157.1;Name=WP_003411157.1;gbkey=CDS;gene=ftsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216667.1;locus_tag=AL55_RS16530;product=cell division protein FtsQ;protein_id=WP_003411157.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2411382 2412866 . - . ID=gene-AL55_RS16535;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AL55_RS16535;old_locus_tag=AL55_02225 NZ_KK316828.1 Protein Homology CDS 2411382 2412866 . - 0 ID=cds-WP_003411159.1;Parent=gene-AL55_RS16535;Dbxref=GenBank:WP_003411159.1;Name=WP_003411159.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216668.1;locus_tag=AL55_RS16535;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_003411159.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2412863 2414095 . - . ID=gene-AL55_RS16540;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AL55_RS16540;old_locus_tag=AL55_02226 NZ_KK316828.1 Protein Homology CDS 2412863 2414095 . - 0 ID=cds-WP_003411161.1;Parent=gene-AL55_RS16540;Dbxref=GenBank:WP_003411161.1;Name=WP_003411161.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216669.1;locus_tag=AL55_RS16540;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_003411161.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2414092 2415666 . - . ID=gene-AL55_RS16545;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AL55_RS16545;old_locus_tag=AL55_02227 NZ_KK316828.1 Protein Homology CDS 2414092 2415666 . - 0 ID=cds-WP_003411165.1;Parent=gene-AL55_RS16545;Dbxref=GenBank:WP_003411165.1;Name=WP_003411165.1;Ontology_term=GO:0009252,GO:0051301,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216670.1;locus_tag=AL55_RS16545;product=putative lipid II flippase FtsW;protein_id=WP_003411165.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2415678 2417138 . - . ID=gene-AL55_RS16550;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AL55_RS16550;old_locus_tag=AL55_02228 NZ_KK316828.1 Protein Homology CDS 2415678 2417138 . - 0 ID=cds-WP_003901342.1;Parent=gene-AL55_RS16550;Dbxref=GenBank:WP_003901342.1;Name=WP_003901342.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216671.3;locus_tag=AL55_RS16550;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_003901342.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2417140 2418219 . - . ID=gene-AL55_RS16555;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AL55_RS16555;old_locus_tag=AL55_02229 NZ_KK316828.1 Protein Homology CDS 2417140 2418219 . - 0 ID=cds-WP_003411171.1;Parent=gene-AL55_RS16555;Dbxref=GenBank:WP_003411171.1;Name=WP_003411171.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216672.1;locus_tag=AL55_RS16555;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_003411171.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2418216 2419748 . - . ID=gene-AL55_RS16560;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AL55_RS16560;old_locus_tag=AL55_02230 NZ_KK316828.1 Protein Homology CDS 2418216 2419748 . - 0 ID=cds-WP_003411187.1;Parent=gene-AL55_RS16560;Dbxref=GenBank:WP_003411187.1;Name=WP_003411187.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216673.1;locus_tag=AL55_RS16560;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_003411187.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2419745 2421352 . - . ID=gene-AL55_RS16565;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AL55_RS16565;old_locus_tag=AL55_02231 NZ_KK316828.1 Protein Homology CDS 2419745 2421352 . - 0 ID=cds-WP_003411189.1;Parent=gene-AL55_RS16565;Dbxref=GenBank:WP_003411189.1;Name=WP_003411189.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216674.1;locus_tag=AL55_RS16565;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_003411189.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2421375 2422409 . - . ID=gene-AL55_RS16570;Name=AL55_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16570;old_locus_tag=AL55_02232 NZ_KK316828.1 Protein Homology CDS 2421375 2422409 . - 0 ID=cds-WP_003899194.1;Parent=gene-AL55_RS16570;Dbxref=GenBank:WP_003899194.1;Name=WP_003899194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216675.1;locus_tag=AL55_RS16570;product=alkyl hydroperoxide reductase;protein_id=WP_003899194.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2422406 2423026 . - . ID=gene-AL55_RS0105025;Name=AL55_RS0105025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105025 NZ_KK316828.1 Protein Homology CDS 2422406 2423026 . - 0 ID=cds-WP_003411199.1;Parent=gene-AL55_RS0105025;Dbxref=GenBank:WP_003411199.1;Name=WP_003411199.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411199.1;locus_tag=AL55_RS0105025;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003411199.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2423019 2423885 . - . ID=gene-AL55_RS16575;Name=AL55_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16575;old_locus_tag=AL55_02234 NZ_KK316828.1 Protein Homology CDS 2423019 2423885 . - 0 ID=cds-WP_003411201.1;Parent=gene-AL55_RS16575;Dbxref=GenBank:WP_003411201.1;Name=WP_003411201.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216677.1;locus_tag=AL55_RS16575;product=TIGR03619 family F420-dependent LLM class oxidoreductase;protein_id=WP_003411201.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2423988 2425586 . - . ID=gene-AL55_RS16580;Name=AL55_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16580;old_locus_tag=AL55_02235 NZ_KK316828.1 Protein Homology CDS 2423988 2425586 . - 0 ID=cds-WP_031697746.1;Parent=gene-AL55_RS16580;Dbxref=GenBank:WP_031697746.1;Name=WP_031697746.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177865.1;locus_tag=AL55_RS16580;product=PE family protein;protein_id=WP_031697746.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2425796 2427835 . - . ID=gene-AL55_RS16585;Name=pbpB;gbkey=Gene;gene=pbpB;gene_biotype=protein_coding;locus_tag=AL55_RS16585;old_locus_tag=AL55_02236 NZ_KK316828.1 Protein Homology CDS 2425796 2427835 . - 0 ID=cds-WP_003411214.1;Parent=gene-AL55_RS16585;Dbxref=GenBank:WP_003411214.1;Name=WP_003411214.1;gbkey=CDS;gene=pbpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216679.1;locus_tag=AL55_RS16585;product=D%2CD-transpeptidase PbpB;protein_id=WP_003411214.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2427832 2428986 . - . ID=gene-AL55_RS16590;Name=AL55_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16590;old_locus_tag=AL55_02237 NZ_KK316828.1 Protein Homology CDS 2427832 2428986 . - 0 ID=cds-WP_003899197.1;Parent=gene-AL55_RS16590;Dbxref=GenBank:WP_003899197.1;Name=WP_003899197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216680.1;locus_tag=AL55_RS16590;product=cell division protein FtsL;protein_id=WP_003899197.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2428983 2430173 . - . ID=gene-AL55_RS16595;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=AL55_RS16595;old_locus_tag=AL55_02238 NZ_KK316828.1 Protein Homology CDS 2428983 2430173 . - 0 ID=cds-WP_003411221.1;Parent=gene-AL55_RS16595;Dbxref=GenBank:WP_003411221.1;Name=WP_003411221.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216681.4;locus_tag=AL55_RS16595;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_003411221.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2430175 2430606 . - . ID=gene-AL55_RS16600;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=AL55_RS16600;old_locus_tag=AL55_02239 NZ_KK316828.1 Protein Homology CDS 2430175 2430606 . - 0 ID=cds-WP_003411225.1;Parent=gene-AL55_RS16600;Dbxref=GenBank:WP_003411225.1;Name=WP_003411225.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216682.1;locus_tag=AL55_RS16600;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_003411225.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2430955 2431359 . - . ID=gene-AL55_RS16605;Name=AL55_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16605;old_locus_tag=AL55_02240 NZ_KK316828.1 Protein Homology CDS 2430955 2431359 . - 0 ID=cds-WP_003411231.1;Parent=gene-AL55_RS16605;Dbxref=GenBank:WP_003411231.1;Name=WP_003411231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216685.1;locus_tag=AL55_RS16605;product=DUF3040 domain-containing protein;protein_id=WP_003411231.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2431625 2432245 . + . ID=gene-AL55_RS16610;Name=AL55_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16610;old_locus_tag=AL55_02241 NZ_KK316828.1 Protein Homology CDS 2431625 2432245 . + 0 ID=cds-WP_003411235.1;Parent=gene-AL55_RS16610;Dbxref=GenBank:WP_003411235.1;Name=WP_003411235.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216686.1;locus_tag=AL55_RS16610;product=GNAT family N-acetyltransferase;protein_id=WP_003411235.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2432341 2433024 . + . ID=gene-AL55_RS16615;Name=lppM;gbkey=Gene;gene=lppM;gene_biotype=protein_coding;locus_tag=AL55_RS16615;old_locus_tag=AL55_02242 NZ_KK316828.1 Protein Homology CDS 2432341 2433024 . + 0 ID=cds-WP_003411238.1;Parent=gene-AL55_RS16615;Dbxref=GenBank:WP_003411238.1;Name=WP_003411238.1;gbkey=CDS;gene=lppM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216687.1;locus_tag=AL55_RS16615;product=lipoprotein LppM;protein_id=WP_003411238.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2433021 2433926 . - . ID=gene-AL55_RS16620;Name=AL55_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16620;old_locus_tag=AL55_02243 NZ_KK316828.1 Protein Homology CDS 2433021 2433926 . - 0 ID=cds-WP_003411241.1;Parent=gene-AL55_RS16620;Dbxref=GenBank:WP_003411241.1;Name=WP_003411241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216688.1;locus_tag=AL55_RS16620;product=mycobacterial-type methylenetetrahydrofolate reductase;protein_id=WP_003411241.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2434237 2435295 . + . ID=gene-AL55_RS16625;Name=idsA2;gbkey=Gene;gene=idsA2;gene_biotype=protein_coding;locus_tag=AL55_RS16625;old_locus_tag=AL55_02244 NZ_KK316828.1 Protein Homology CDS 2434237 2435295 . + 0 ID=cds-WP_003411245.1;Parent=gene-AL55_RS16625;Dbxref=GenBank:WP_003411245.1;Name=WP_003411245.1;Ontology_term=GO:0008299,GO:0033384,GO:0004161,GO:0004337,GO:0004659;gbkey=CDS;gene=idsA2;go_function=dimethylallyltranstransferase activity|0004161||IEA,(2E%2C6E)-farnesyl diphosphate synthase activity|0004337||IEA,prenyltransferase activity|0004659||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,geranyl diphosphate biosynthetic process|0033384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216689.1;locus_tag=AL55_RS16625;product=bifunctional (2E%2C6E)-farnesyl/geranyl diphosphate synthase;protein_id=WP_003411245.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2435299 2436849 . + . ID=gene-AL55_RS16630;Name=mptA;gbkey=Gene;gene=mptA;gene_biotype=protein_coding;locus_tag=AL55_RS16630;old_locus_tag=AL55_02245 NZ_KK316828.1 Protein Homology CDS 2435299 2436849 . + 0 ID=cds-WP_003899200.1;Parent=gene-AL55_RS16630;Dbxref=GenBank:WP_003899200.1;Name=WP_003899200.1;gbkey=CDS;gene=mptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216690.1;locus_tag=AL55_RS16630;product=alpha-(1->6)-mannopyranosyltransferase A;protein_id=WP_003899200.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2436836 2437240 . - . ID=gene-AL55_RS16635;Name=AL55_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16635;old_locus_tag=AL55_02246 NZ_KK316828.1 Protein Homology CDS 2436836 2437240 . - 0 ID=cds-WP_003911781.1;Parent=gene-AL55_RS16635;Dbxref=GenBank:WP_003911781.1;Name=WP_003911781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020787128.1;locus_tag=AL55_RS16635;product=Rv2175c family DNA-binding protein;protein_id=WP_003911781.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2437331 2438530 . + . ID=gene-AL55_RS16640;Name=pknL;gbkey=Gene;gene=pknL;gene_biotype=protein_coding;locus_tag=AL55_RS16640;old_locus_tag=AL55_02247 NZ_KK316828.1 Protein Homology CDS 2437331 2438530 . + 0 ID=cds-WP_003899202.1;Parent=gene-AL55_RS16640;Dbxref=GenBank:WP_003899202.1;Name=WP_003899202.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknL;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216692.1;locus_tag=AL55_RS16640;product=protein kinase domain-containing protein;protein_id=WP_003899202.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2438672 2439271 . - . ID=gene-AL55_RS16645;Name=AL55_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16645;old_locus_tag=AL55_02248 NZ_KK316828.1 Protein Homology CDS 2438672 2439271 . - 0 ID=cds-WP_152313577.1;Parent=gene-AL55_RS16645;Dbxref=GenBank:WP_152313577.1;Name=WP_152313577.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF014430.6;locus_tag=AL55_RS16645;product=transposase;protein_id=WP_152313577.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2439271 2439453 . - . ID=gene-AL55_RS26130;Name=AL55_RS26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26130 NZ_KK316828.1 Protein Homology CDS 2439271 2439453 . - 0 ID=cds-WP_003905774.1;Parent=gene-AL55_RS26130;Dbxref=GenBank:WP_003905774.1;Name=WP_003905774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003905774.1;locus_tag=AL55_RS26130;product=hypothetical protein;protein_id=WP_003905774.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2439722 2441110 . - . ID=gene-AL55_RS16650;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=AL55_RS16650;old_locus_tag=AL55_02249 NZ_KK316828.1 Protein Homology CDS 2439722 2441110 . - 0 ID=cds-WP_003411323.1;Parent=gene-AL55_RS16650;Dbxref=GenBank:WP_003411323.1;Name=WP_003411323.1;Ontology_term=GO:0009073,GO:0009423,GO:0003849;gbkey=CDS;gene=aroG;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216694.1;locus_tag=AL55_RS16650;product=class II 3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_003411323.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2441201 2441707 . - . ID=gene-AL55_RS16655;Name=AL55_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16655;old_locus_tag=AL55_02250 NZ_KK316828.1 Protein Homology CDS 2441201 2441707 . - 0 ID=cds-WP_003411331.1;Parent=gene-AL55_RS16655;Dbxref=GenBank:WP_003411331.1;Name=WP_003411331.1;Ontology_term=GO:0000287,GO:0008408;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216695.1;locus_tag=AL55_RS16655;product=polyadenylate-specific 3'-exoribonuclease AS;protein_id=WP_003411331.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2441717 2442604 . - . ID=gene-AL55_RS16660;Name=AL55_RS16660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS16660;old_locus_tag=AL55_02251;pseudo=true NZ_KK316828.1 Protein Homology CDS 2441717 2442604 . - 0 ID=cds-AL55_RS16660;Parent=gene-AL55_RS16660;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216696.1;locus_tag=AL55_RS16660;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2442692 2443975 . + . ID=gene-AL55_RS16665;Name=AL55_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16665;old_locus_tag=AL55_02252 NZ_KK316828.1 Protein Homology CDS 2442692 2443975 . + 0 ID=cds-WP_003411339.1;Parent=gene-AL55_RS16665;Dbxref=GenBank:WP_003411339.1;Name=WP_003411339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216697.1;locus_tag=AL55_RS16665;product=alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase;protein_id=WP_003411339.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2443976 2444719 . - . ID=gene-AL55_RS16670;Name=AL55_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16670;old_locus_tag=AL55_02253 NZ_KK316828.1 Protein Homology CDS 2443976 2444719 . - 0 ID=cds-WP_031721593.1;Parent=gene-AL55_RS16670;Dbxref=GenBank:WP_031721593.1;Name=WP_031721593.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216698.1;locus_tag=AL55_RS16670;product=lysophospholipid acyltransferase family protein;protein_id=WP_031721593.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2444805 2445200 . - . ID=gene-AL55_RS16675;Name=AL55_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16675;old_locus_tag=AL55_02254 NZ_KK316828.1 Protein Homology CDS 2444805 2445200 . - 0 ID=cds-WP_003411344.1;Parent=gene-AL55_RS16675;Dbxref=GenBank:WP_003411344.1;Name=WP_003411344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216699.1;locus_tag=AL55_RS16675;product=DEAD/DEAH box helicase family protein;protein_id=WP_003411344.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2445197 2446459 . - . ID=gene-AL55_RS16680;Name=AL55_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16680;old_locus_tag=AL55_02255 NZ_KK316828.1 Protein Homology CDS 2445197 2446459 . - 0 ID=cds-WP_003914048.1;Parent=gene-AL55_RS16680;Dbxref=GenBank:WP_003914048.1;Name=WP_003914048.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914048.1;locus_tag=AL55_RS16680;product=ArsA family ATPase;protein_id=WP_003914048.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2446456 2446890 . - . ID=gene-AL55_RS16685;Name=AL55_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16685;old_locus_tag=AL55_02256 NZ_KK316828.1 Protein Homology CDS 2446456 2446890 . - 0 ID=cds-WP_003411354.1;Parent=gene-AL55_RS16685;Dbxref=GenBank:WP_003411354.1;Name=WP_003411354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216701.1;locus_tag=AL55_RS16685;product=SRPBCC family protein;protein_id=WP_003411354.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2446995 2447384 . - . ID=gene-AL55_RS16690;Name=AL55_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16690;old_locus_tag=AL55_02257 NZ_KK316828.1 Protein Homology CDS 2446995 2447384 . - 0 ID=cds-WP_003411357.1;Parent=gene-AL55_RS16690;Dbxref=GenBank:WP_003411357.1;Name=WP_003411357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216702.1;locus_tag=AL55_RS16690;product=hypothetical protein;protein_id=WP_003411357.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2447550 2449352 . + . ID=gene-AL55_RS16695;Name=AL55_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16695;old_locus_tag=AL55_02258 NZ_KK316828.1 Protein Homology CDS 2447550 2449352 . + 0 ID=cds-WP_031695417.1;Parent=gene-AL55_RS16695;Dbxref=GenBank:WP_031695417.1;Name=WP_031695417.1;Ontology_term=GO:0005524,GO:0015645;gbkey=CDS;go_function=ATP binding|0005524||IEA,fatty acid ligase activity|0015645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216703.1;locus_tag=AL55_RS16695;product=AMP-dependent synthetase/ligase;protein_id=WP_031695417.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2449383 2450540 . - . ID=gene-AL55_RS16700;Name=pimB;gbkey=Gene;gene=pimB;gene_biotype=protein_coding;locus_tag=AL55_RS16700;old_locus_tag=AL55_02259 NZ_KK316828.1 Protein Homology CDS 2449383 2450540 . - 0 ID=cds-WP_003411369.1;Parent=gene-AL55_RS16700;Dbxref=GenBank:WP_003411369.1;Name=WP_003411369.1;gbkey=CDS;gene=pimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216704.2;locus_tag=AL55_RS16700;product=GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase;protein_id=WP_003411369.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2450637 2451410 . - . ID=gene-AL55_RS16705;Name=AL55_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16705;old_locus_tag=AL55_02260 NZ_KK316828.1 Protein Homology CDS 2450637 2451410 . - 0 ID=cds-WP_003411371.1;Parent=gene-AL55_RS16705;Dbxref=GenBank:WP_003411371.1;Name=WP_003411371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216705.1;locus_tag=AL55_RS16705;product=hypothetical protein;protein_id=WP_003411371.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2451505 2452662 . - . ID=gene-AL55_RS16710;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=AL55_RS16710;old_locus_tag=AL55_02261 NZ_KK316828.1 Protein Homology CDS 2451505 2452662 . - 0 ID=cds-WP_003411373.1;Parent=gene-AL55_RS16710;Dbxref=GenBank:WP_003411373.1;Name=WP_003411373.1;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216706.1;locus_tag=AL55_RS16710;product=peptidoglycan hydrolase RipC;protein_id=WP_003411373.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2452848 2453126 . - . ID=gene-AL55_RS0105035;Name=AL55_RS0105035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105035;old_locus_tag=AL55_02262 NZ_KK316828.1 Protein Homology CDS 2452848 2453126 . - 0 ID=cds-WP_003908818.1;Parent=gene-AL55_RS0105035;Dbxref=GenBank:WP_003908818.1;Name=WP_003908818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908818.1;locus_tag=AL55_RS0105035;product=hypothetical protein;protein_id=WP_003908818.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2453233 2455083 . + . ID=gene-AL55_RS16715;Name=AL55_RS16715;end_range=2455083,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS16715;old_locus_tag=AL55_02263;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 2453233 2455083 . + 0 ID=cds-AL55_RS16715;Parent=gene-AL55_RS16715;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2455083,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF005903.0;locus_tag=AL55_RS16715;partial=true;product=DEDD exonuclease domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2455021 2456133 . - . ID=gene-AL55_RS26135;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=AL55_RS26135;old_locus_tag=AL55_02264 NZ_KK316828.1 Protein Homology CDS 2455021 2456133 . - 0 ID=cds-WP_003411387.1;Parent=gene-AL55_RS26135;Dbxref=GenBank:WP_003411387.1;Name=WP_003411387.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216708.1;locus_tag=AL55_RS26135;product=anthranilate phosphoribosyltransferase;protein_id=WP_003411387.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2456291 2456902 . + . ID=gene-AL55_RS16720;Name=ctaE;gbkey=Gene;gene=ctaE;gene_biotype=protein_coding;locus_tag=AL55_RS16720;old_locus_tag=AL55_02265 NZ_KK316828.1 Protein Homology CDS 2456291 2456902 . + 0 ID=cds-WP_003411389.1;Parent=gene-AL55_RS16720;Dbxref=GenBank:WP_003411389.1;Name=WP_003411389.1;gbkey=CDS;gene=ctaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216709.1;locus_tag=AL55_RS16720;product=aa3-type cytochrome oxidase subunit III;protein_id=WP_003411389.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2456943 2457785 . + . ID=gene-AL55_RS16725;Name=qcrC;gbkey=Gene;gene=qcrC;gene_biotype=protein_coding;locus_tag=AL55_RS16725;old_locus_tag=AL55_02266 NZ_KK316828.1 Protein Homology CDS 2456943 2457785 . + 0 ID=cds-WP_003411392.1;Parent=gene-AL55_RS16725;Dbxref=GenBank:WP_003411392.1;Name=WP_003411392.1;gbkey=CDS;gene=qcrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216710.1;locus_tag=AL55_RS16725;product=cytochrome bc1 complex diheme cytochrome c subunit;protein_id=WP_003411392.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2457788 2457859 . + . ID=gene-AL55_RS28075;Name=AL55_RS28075;end_range=2457859,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28075;partial=true;pseudo=true;start_range=.,2457788 NZ_KK316828.1 Protein Homology CDS 2457788 2457859 . + 0 ID=cds-AL55_RS28075;Parent=gene-AL55_RS28075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2457859,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217793.1;locus_tag=AL55_RS28075;partial=true;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;pseudo=true;start_range=.,2457788;transl_table=11 NZ_KK316828.1 RefSeq gene 2457860 2459071 . + . ID=gene-AL55_RS16730;Name=qcrA;gbkey=Gene;gene=qcrA;gene_biotype=protein_coding;locus_tag=AL55_RS16730;old_locus_tag=AL55_02267 NZ_KK316828.1 Protein Homology CDS 2457860 2459071 . + 0 ID=cds-WP_003911816.1;Parent=gene-AL55_RS16730;Dbxref=GenBank:WP_003911816.1;Name=WP_003911816.1;gbkey=CDS;gene=qcrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911816.1;locus_tag=AL55_RS16730;product=cytochrome bc1 complex Rieske iron-sulfur subunit;protein_id=WP_003911816.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2459068 2460717 . + . ID=gene-AL55_RS16735;Name=qcrB;gbkey=Gene;gene=qcrB;gene_biotype=protein_coding;locus_tag=AL55_RS16735;old_locus_tag=AL55_02268 NZ_KK316828.1 Protein Homology CDS 2459068 2460717 . + 0 ID=cds-WP_003899212.1;Parent=gene-AL55_RS16735;Dbxref=GenBank:WP_003899212.1;Name=WP_003899212.1;gbkey=CDS;gene=qcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216712.1;locus_tag=AL55_RS16735;product=cytochrome bc1 complex cytochrome b subunit;protein_id=WP_003899212.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2460837 2461481 . - . ID=gene-AL55_RS16740;Name=AL55_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16740;old_locus_tag=AL55_02269 NZ_KK316828.1 Protein Homology CDS 2460837 2461481 . - 0 ID=cds-WP_003899213.1;Parent=gene-AL55_RS16740;Dbxref=GenBank:WP_003899213.1;Name=WP_003899213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216713.1;locus_tag=AL55_RS16740;product=DUF2561 family protein;protein_id=WP_003899213.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2461481 2462380 . - . ID=gene-AL55_RS16745;Name=AL55_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16745;old_locus_tag=AL55_02270 NZ_KK316828.1 Protein Homology CDS 2461481 2462380 . - 0 ID=cds-WP_003411405.1;Parent=gene-AL55_RS16745;Dbxref=GenBank:WP_003411405.1;Name=WP_003411405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216714.1;locus_tag=AL55_RS16745;product=MmpS family transport accessory protein;protein_id=WP_003411405.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2462566 2462985 . - . ID=gene-AL55_RS16750;Name=AL55_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16750;old_locus_tag=AL55_02271 NZ_KK316828.1 Protein Homology CDS 2462566 2462985 . - 0 ID=cds-WP_003411408.1;Parent=gene-AL55_RS16750;Dbxref=GenBank:WP_003411408.1;Name=WP_003411408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216715.1;locus_tag=AL55_RS16750;product=cytochrome c oxidase subunit 4;protein_id=WP_003411408.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2462993 2464084 . - . ID=gene-AL55_RS16755;Name=ctaC;gbkey=Gene;gene=ctaC;gene_biotype=protein_coding;locus_tag=AL55_RS16755;old_locus_tag=AL55_02272 NZ_KK316828.1 Protein Homology CDS 2462993 2464084 . - 0 ID=cds-WP_003899214.1;Parent=gene-AL55_RS16755;Dbxref=GenBank:WP_003899214.1;Name=WP_003899214.1;gbkey=CDS;gene=ctaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216716.1;locus_tag=AL55_RS16755;product=aa3-type cytochrome oxidase subunit II;protein_id=WP_003899214.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2464330 2466288 . + . ID=gene-AL55_RS16760;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AL55_RS16760;old_locus_tag=AL55_02273 NZ_KK316828.1 Protein Homology CDS 2464330 2466288 . + 0 ID=cds-WP_003411413.1;Parent=gene-AL55_RS16760;Dbxref=GenBank:WP_003411413.1;Name=WP_003411413.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216717.1;locus_tag=AL55_RS16760;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_003411413.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2466386 2467360 . - . ID=gene-AL55_RS16765;Name=adoK;gbkey=Gene;gene=adoK;gene_biotype=protein_coding;locus_tag=AL55_RS16765;old_locus_tag=AL55_02274 NZ_KK316828.1 Protein Homology CDS 2466386 2467360 . - 0 ID=cds-WP_003411414.1;Parent=gene-AL55_RS16765;Dbxref=GenBank:WP_003411414.1;Name=WP_003411414.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;gene=adoK;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216718.1;locus_tag=AL55_RS16765;product=carbohydrate kinase family protein;protein_id=WP_003411414.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2467564 2468256 . + . ID=gene-AL55_RS16770;Name=AL55_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16770;old_locus_tag=AL55_02275 NZ_KK316828.1 Protein Homology CDS 2467564 2468256 . + 0 ID=cds-WP_003411415.1;Parent=gene-AL55_RS16770;Dbxref=GenBank:WP_003411415.1;Name=WP_003411415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216719.1;locus_tag=AL55_RS16770;product=Rv0361 family membrane protein;protein_id=WP_003411415.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2468264 2468620 . - . ID=gene-AL55_RS16775;Name=AL55_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16775;old_locus_tag=AL55_02276 NZ_KK316828.1 Protein Homology CDS 2468264 2468620 . - 0 ID=cds-WP_003411418.1;Parent=gene-AL55_RS16775;Dbxref=GenBank:WP_003411418.1;Name=WP_003411418.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216720.1;locus_tag=AL55_RS16775;product=HesB/IscA family protein;protein_id=WP_003411418.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2468720 2469796 . - . ID=gene-AL55_RS16780;Name=AL55_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16780;old_locus_tag=AL55_02277 NZ_KK316828.1 Protein Homology CDS 2468720 2469796 . - 0 ID=cds-WP_003411420.1;Parent=gene-AL55_RS16780;Dbxref=GenBank:WP_003411420.1;Name=WP_003411420.1;Ontology_term=GO:0016310,GO:0031388,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=phosphorylation|0016310||IEA,organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216721.2;locus_tag=AL55_RS16780;product=glycerate kinase family protein;protein_id=WP_003411420.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2469955 2470665 . + . ID=gene-AL55_RS16785;Name=AL55_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16785;old_locus_tag=AL55_02278 NZ_KK316828.1 Protein Homology CDS 2469955 2470665 . + 0 ID=cds-WP_003411425.1;Parent=gene-AL55_RS16785;Dbxref=GenBank:WP_003411425.1;Name=WP_003411425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216722.2;locus_tag=AL55_RS16785;product=DUF3043 domain-containing protein;protein_id=WP_003411425.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2470744 2471829 . + . ID=gene-AL55_RS16790;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=AL55_RS16790;old_locus_tag=AL55_02279 NZ_KK316828.1 Protein Homology CDS 2470744 2471829 . + 0 ID=cds-WP_003411429.1;Parent=gene-AL55_RS16790;Dbxref=GenBank:WP_003411429.1;Name=WP_003411429.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216723.1;locus_tag=AL55_RS16790;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_003411429.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2471826 2472575 . + . ID=gene-AL55_RS16795;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=AL55_RS16795;old_locus_tag=AL55_02280 NZ_KK316828.1 Protein Homology CDS 2471826 2472575 . + 0 ID=cds-WP_003899217.1;Parent=gene-AL55_RS16795;Dbxref=GenBank:WP_003899217.1;Name=WP_003899217.1;gbkey=CDS;gene=cobS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216724.1;locus_tag=AL55_RS16795;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_003899217.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2472733 2474271 . + . ID=gene-AL55_RS16800;Name=AL55_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16800;old_locus_tag=AL55_02281 NZ_KK316828.1 Protein Homology CDS 2472733 2474271 . + 0 ID=cds-WP_003899218.1;Parent=gene-AL55_RS16800;Dbxref=GenBank:WP_003899218.1;Name=WP_003899218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216725.1;locus_tag=AL55_RS16800;product=hypothetical protein;protein_id=WP_003899218.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2474197 2475303 . - . ID=gene-AL55_RS16805;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=AL55_RS16805;old_locus_tag=AL55_02282 NZ_KK316828.1 Protein Homology CDS 2474197 2475303 . - 0 ID=cds-WP_003411438.1;Parent=gene-AL55_RS16805;Dbxref=GenBank:WP_003411438.1;Name=WP_003411438.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216726.1;locus_tag=AL55_RS16805;product=branched-chain amino acid aminotransferase;protein_id=WP_003411438.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2475375 2476478 . - . ID=gene-AL55_RS16810;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AL55_RS16810;old_locus_tag=AL55_02283 NZ_KK316828.1 Protein Homology CDS 2475375 2476478 . - 0 ID=cds-WP_003899219.1;Parent=gene-AL55_RS16810;Dbxref=GenBank:WP_003899219.1;Name=WP_003899219.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010907977.1;locus_tag=AL55_RS16810;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_003899219.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2476523 2477659 . + . ID=gene-AL55_RS16815;Name=AL55_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16815;old_locus_tag=AL55_02284 NZ_KK316828.1 Protein Homology CDS 2476523 2477659 . + 0 ID=cds-WP_003411442.1;Parent=gene-AL55_RS16815;Dbxref=GenBank:WP_003411442.1;Name=WP_003411442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216728.1;locus_tag=AL55_RS16815;product=adenylyl cyclase;protein_id=WP_003411442.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2477671 2479218 . + . ID=gene-AL55_RS16820;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=AL55_RS16820;old_locus_tag=AL55_02285 NZ_KK316828.1 Protein Homology CDS 2477671 2479218 . + 0 ID=cds-WP_003899220.1;Parent=gene-AL55_RS16820;Dbxref=GenBank:WP_003899220.1;Name=WP_003899220.1;Ontology_term=GO:0006508,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216729.1;locus_tag=AL55_RS16820;product=leucyl aminopeptidase;protein_id=WP_003899220.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2479256 2481034 . - . ID=gene-AL55_RS16825;Name=ephD;gbkey=Gene;gene=ephD;gene_biotype=protein_coding;locus_tag=AL55_RS16825;old_locus_tag=AL55_02286 NZ_KK316828.1 Protein Homology CDS 2479256 2481034 . - 0 ID=cds-WP_003411445.1;Parent=gene-AL55_RS16825;Dbxref=GenBank:WP_003411445.1;Name=WP_003411445.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ephD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216730.1;locus_tag=AL55_RS16825;product=SDR family oxidoreductase;protein_id=WP_003411445.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2481298 2482959 . + . ID=gene-AL55_RS16830;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=AL55_RS16830;old_locus_tag=AL55_02287 NZ_KK316828.1 Protein Homology CDS 2481298 2482959 . + 0 ID=cds-WP_003411450.1;Parent=gene-AL55_RS16830;Dbxref=GenBank:WP_003411450.1;Name=WP_003411450.1;Ontology_term=GO:0016746;gbkey=CDS;gene=sucB;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216731.1;locus_tag=AL55_RS16830;product=2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase;protein_id=WP_003411450.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2482959 2483864 . + . ID=gene-AL55_RS16835;Name=AL55_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16835;old_locus_tag=AL55_02288 NZ_KK316828.1 Protein Homology CDS 2482959 2483864 . + 0 ID=cds-WP_003411454.1;Parent=gene-AL55_RS16835;Dbxref=GenBank:WP_003411454.1;Name=WP_003411454.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216732.1;locus_tag=AL55_RS16835;product=TIGR01777 family oxidoreductase;protein_id=WP_003411454.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2483917 2484609 . + . ID=gene-AL55_RS16840;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AL55_RS16840;old_locus_tag=AL55_02289 NZ_KK316828.1 Protein Homology CDS 2483917 2484609 . + 0 ID=cds-WP_003411458.1;Parent=gene-AL55_RS16840;Dbxref=GenBank:WP_003411458.1;Name=WP_003411458.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216733.1;locus_tag=AL55_RS16840;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_003411458.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2484606 2485541 . + . ID=gene-AL55_RS16845;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AL55_RS16845;old_locus_tag=AL55_02290 NZ_KK316828.1 Protein Homology CDS 2484606 2485541 . + 0 ID=cds-WP_003411460.1;Parent=gene-AL55_RS16845;Dbxref=GenBank:WP_003411460.1;Name=WP_003411460.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216734.1;locus_tag=AL55_RS16845;product=lipoyl synthase;protein_id=WP_003411460.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2485568 2486320 . + . ID=gene-AL55_RS16850;Name=AL55_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16850;old_locus_tag=AL55_02291 NZ_KK316828.1 Protein Homology CDS 2485568 2486320 . + 0 ID=cds-WP_003411463.1;Parent=gene-AL55_RS16850;Dbxref=GenBank:WP_003411463.1;Name=WP_003411463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216735.1;locus_tag=AL55_RS16850;product=DUF4191 domain-containing protein;protein_id=WP_003411463.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2486327 2486749 . - . ID=gene-AL55_RS16855;Name=AL55_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16855;old_locus_tag=AL55_02292 NZ_KK316828.1 Protein Homology CDS 2486327 2486749 . - 0 ID=cds-WP_003411466.1;Parent=gene-AL55_RS16855;Dbxref=GenBank:WP_003411466.1;Name=WP_003411466.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177661.1;locus_tag=AL55_RS16855;product=RDD family protein;protein_id=WP_003411466.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2486948 2488384 . + . ID=gene-AL55_RS16860;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AL55_RS16860;old_locus_tag=AL55_02293 NZ_KK316828.1 Protein Homology CDS 2486948 2488384 . + 0 ID=cds-WP_003411475.1;Parent=gene-AL55_RS16860;Dbxref=GenBank:WP_003411475.1;Name=WP_003411475.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216736.1;locus_tag=AL55_RS16860;product=type I glutamate--ammonia ligase;protein_id=WP_003411475.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2488702 2491686 . - . ID=gene-AL55_RS16865;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=AL55_RS16865;old_locus_tag=AL55_02294 NZ_KK316828.1 Protein Homology CDS 2488702 2491686 . - 0 ID=cds-WP_003411478.1;Parent=gene-AL55_RS16865;Dbxref=GenBank:WP_003411478.1;Name=WP_003411478.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216737.1;locus_tag=AL55_RS16865;product=bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase;protein_id=WP_003411478.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2491735 2493075 . - . ID=gene-AL55_RS16870;Name=AL55_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16870;old_locus_tag=AL55_02295 NZ_KK316828.1 Protein Homology CDS 2491735 2493075 . - 0 ID=cds-WP_003411482.1;Parent=gene-AL55_RS16870;Dbxref=GenBank:WP_003411482.1;Name=WP_003411482.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216738.1;locus_tag=AL55_RS16870;product=glutamine synthetase family protein;protein_id=WP_003411482.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2493170 2494732 . - . ID=gene-AL55_RS16875;Name=caeB;gbkey=Gene;gene=caeB;gene_biotype=protein_coding;locus_tag=AL55_RS16875;old_locus_tag=AL55_02296 NZ_KK316828.1 Protein Homology CDS 2493170 2494732 . - 0 ID=cds-WP_003411484.1;Parent=gene-AL55_RS16875;Dbxref=GenBank:WP_003411484.1;Name=WP_003411484.1;gbkey=CDS;gene=caeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216739.1;locus_tag=AL55_RS16875;product=carboxylesterase CaeB;protein_id=WP_003411484.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2494794 2496356 . - . ID=gene-AL55_RS16880;Name=caeA;gbkey=Gene;gene=caeA;gene_biotype=protein_coding;locus_tag=AL55_RS16880;old_locus_tag=AL55_02297 NZ_KK316828.1 Protein Homology CDS 2494794 2496356 . - 0 ID=cds-WP_003411486.1;Parent=gene-AL55_RS16880;Dbxref=GenBank:WP_003411486.1;Name=WP_003411486.1;gbkey=CDS;gene=caeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216740.1;locus_tag=AL55_RS16880;product=carboxylesterase CaeA;protein_id=WP_003411486.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2496558 2496779 . - . ID=gene-AL55_RS0105050;Name=AL55_RS0105050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105050 NZ_KK316828.1 Protein Homology CDS 2496558 2496779 . - 0 ID=cds-WP_012054189.1;Parent=gene-AL55_RS0105050;Dbxref=GenBank:WP_012054189.1;Name=WP_012054189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030036.1;locus_tag=AL55_RS0105050;product=hypothetical protein;protein_id=WP_012054189.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2497075 2497920 . + . ID=gene-AL55_RS16885;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AL55_RS16885;old_locus_tag=AL55_02298 NZ_KK316828.1 Protein Homology CDS 2497075 2497920 . + 0 ID=cds-WP_003411489.1;Parent=gene-AL55_RS16885;Dbxref=GenBank:WP_003411489.1;Name=WP_003411489.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216741.1;locus_tag=AL55_RS16885;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_003411489.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2498165 2499706 . + . ID=gene-AL55_RS16890;Name=AL55_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16890;old_locus_tag=AL55_02299 NZ_KK316828.1 Protein Homology CDS 2498165 2499706 . + 0 ID=cds-WP_003899224.1;Parent=gene-AL55_RS16890;Dbxref=GenBank:WP_003899224.1;Name=WP_003899224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216742.1;locus_tag=AL55_RS16890;product=CYTH and CHAD domain-containing protein;protein_id=WP_003899224.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2499719 2500147 . - . ID=gene-AL55_RS22545;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AL55_RS22545 NZ_KK316828.1 cmsearch RNase_P_RNA 2499719 2500147 . - . ID=rna-AL55_RS22545;Parent=gene-AL55_RS22545;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL55_RS22545;product=RNase P RNA component class A NZ_KK316828.1 cmsearch exon 2499719 2500147 . - . ID=exon-AL55_RS22545-1;Parent=rna-AL55_RS22545;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL55_RS22545;product=RNase P RNA component class A NZ_KK316828.1 RefSeq pseudogene 2500256 2500965 . + . ID=gene-AL55_RS16895;Name=AL55_RS16895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS16895;old_locus_tag=AL55_02300;pseudo=true NZ_KK316828.1 Protein Homology CDS 2500256 2500965 . + 0 ID=cds-AL55_RS16895;Parent=gene-AL55_RS16895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007170864.1;locus_tag=AL55_RS16895;product=2OG-Fe(II) oxygenase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2500977 2502071 . - . ID=gene-AL55_RS16900;Name=AL55_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16900;old_locus_tag=AL55_02301 NZ_KK316828.1 Protein Homology CDS 2500977 2502071 . - 0 ID=cds-WP_003899226.1;Parent=gene-AL55_RS16900;Dbxref=GenBank:WP_003899226.1;Name=WP_003899226.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872350.1;locus_tag=AL55_RS16900;product=bifunctional RNase H/acid phosphatase;protein_id=WP_003899226.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2502068 2502805 . - . ID=gene-AL55_RS16905;Name=AL55_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16905;old_locus_tag=AL55_02302 NZ_KK316828.1 Protein Homology CDS 2502068 2502805 . - 0 ID=cds-WP_003411501.1;Parent=gene-AL55_RS16905;Dbxref=GenBank:WP_003411501.1;Name=WP_003411501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216745.1;locus_tag=AL55_RS16905;product=zinc ribbon domain-containing protein;protein_id=WP_003411501.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2502802 2503941 . - . ID=gene-AL55_RS16910;Name=AL55_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16910;old_locus_tag=AL55_02303 NZ_KK316828.1 Protein Homology CDS 2502802 2503941 . - 0 ID=cds-WP_003411502.1;Parent=gene-AL55_RS16910;Dbxref=GenBank:WP_003411502.1;Name=WP_003411502.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216746.1;locus_tag=AL55_RS16910;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_003411502.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2503938 2505023 . - . ID=gene-AL55_RS16915;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=AL55_RS16915;old_locus_tag=AL55_02304 NZ_KK316828.1 Protein Homology CDS 2503938 2505023 . - 0 ID=cds-WP_079092157.1;Parent=gene-AL55_RS16915;Dbxref=GenBank:WP_079092157.1;Name=WP_079092157.1;Ontology_term=GO:0009236,GO:0030170;gbkey=CDS;gene=cobC;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: protein motif:HMM:NF005915.0;locus_tag=AL55_RS16915;product=Rv2231c family histidinol phosphate aminotransferase CobC;protein_id=WP_079092157.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2505069 2505494 . - . ID=gene-AL55_RS16920;Name=AL55_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16920;old_locus_tag=AL55_02305 NZ_KK316828.1 Protein Homology CDS 2505069 2505494 . - 0 ID=cds-WP_010886140.1;Parent=gene-AL55_RS16920;Dbxref=GenBank:WP_010886140.1;Name=WP_010886140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410917.1;locus_tag=AL55_RS16920;product=PIN domain-containing protein;protein_id=WP_010886140.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2505540 2505716 . - . ID=gene-AL55_RS27335;Name=AL55_RS27335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27335;old_locus_tag=AL55_02306 NZ_KK316828.1 Protein Homology CDS 2505540 2505716 . - 0 ID=cds-WP_003903810.1;Parent=gene-AL55_RS27335;Dbxref=GenBank:WP_003903810.1;Name=WP_003903810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410918.1;locus_tag=AL55_RS27335;product=antitoxin VapB16;protein_id=WP_003903810.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2505761 2506486 . + . ID=gene-AL55_RS0105055;Name=ptkA;gbkey=Gene;gene=ptkA;gene_biotype=protein_coding;locus_tag=AL55_RS0105055;old_locus_tag=AL55_02307 NZ_KK316828.1 Protein Homology CDS 2505761 2506486 . + 0 ID=cds-WP_015288273.1;Parent=gene-AL55_RS0105055;Dbxref=GenBank:WP_015288273.1;Name=WP_015288273.1;gbkey=CDS;gene=ptkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015290517.1;locus_tag=AL55_RS0105055;product=Rv2232 family HAD-type protein-tyrosine kinase;protein_id=WP_015288273.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2506479 2506970 . + . ID=gene-AL55_RS16930;Name=ptpA;gbkey=Gene;gene=ptpA;gene_biotype=protein_coding;locus_tag=AL55_RS16930;old_locus_tag=AL55_02308 NZ_KK316828.1 Protein Homology CDS 2506479 2506970 . + 0 ID=cds-WP_003411510.1;Parent=gene-AL55_RS16930;Dbxref=GenBank:WP_003411510.1;Name=WP_003411510.1;gbkey=CDS;gene=ptpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216750.1;locus_tag=AL55_RS16930;product=protein-tyrosine-phosphatase;protein_id=WP_003411510.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2506970 2507785 . + . ID=gene-AL55_RS16935;Name=AL55_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16935;old_locus_tag=AL55_02309 NZ_KK316828.1 Protein Homology CDS 2506970 2507785 . + 0 ID=cds-WP_003411514.1;Parent=gene-AL55_RS16935;Dbxref=GenBank:WP_003411514.1;Name=WP_003411514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216751.1;locus_tag=AL55_RS16935;product=SURF1 family cytochrome oxidase biogenesis protein;protein_id=WP_003411514.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2507767 2508708 . - . ID=gene-AL55_RS16940;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=AL55_RS16940;old_locus_tag=AL55_02310 NZ_KK316828.1 Protein Homology CDS 2507767 2508708 . - 0 ID=cds-WP_003901355.1;Parent=gene-AL55_RS16940;Dbxref=GenBank:WP_003901355.1;Name=WP_003901355.1;Ontology_term=GO:0009236,GO:0048472;gbkey=CDS;gene=cobD;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216752.1;locus_tag=AL55_RS16940;product=cobalamin biosynthesis protein;protein_id=WP_003901355.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2508774 2509589 . + . ID=gene-AL55_RS16945;Name=AL55_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16945;old_locus_tag=AL55_02311 NZ_KK316828.1 Protein Homology CDS 2508774 2509589 . + 0 ID=cds-WP_003411520.1;Parent=gene-AL55_RS16945;Dbxref=GenBank:WP_003411520.1;Name=WP_003411520.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411520.1;locus_tag=AL55_RS16945;product=oxygenase MpaB family protein;protein_id=WP_003411520.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2509684 2509809 . - . ID=gene-AL55_RS27930;Name=AL55_RS27930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27930 NZ_KK316828.1 GeneMarkS-2+ CDS 2509684 2509809 . - 0 ID=cds-WP_009936466.1;Parent=gene-AL55_RS27930;Dbxref=GenBank:WP_009936466.1;Name=WP_009936466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS27930;product=hypothetical protein;protein_id=WP_009936466.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2509931 2510002 . - . ID=gene-AL55_RS16955;Name=AL55_RS16955;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS16955;old_locus_tag=AL55_02313 NZ_KK316828.1 tRNAscan-SE tRNA 2509931 2510002 . - . ID=rna-AL55_RS16955;Parent=gene-AL55_RS16955;anticodon=(pos:complement(2509968..2509970));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS16955;product=tRNA-Val NZ_KK316828.1 tRNAscan-SE exon 2509931 2510002 . - . ID=exon-AL55_RS16955-1;Parent=rna-AL55_RS16955;anticodon=(pos:complement(2509968..2509970));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS16955;product=tRNA-Val NZ_KK316828.1 RefSeq gene 2510048 2510509 . - . ID=gene-AL55_RS16960;Name=ahpE;gbkey=Gene;gene=ahpE;gene_biotype=protein_coding;locus_tag=AL55_RS16960;old_locus_tag=AL55_02314 NZ_KK316828.1 Protein Homology CDS 2510048 2510509 . - 0 ID=cds-WP_003411527.1;Parent=gene-AL55_RS16960;Dbxref=GenBank:WP_003411527.1;Name=WP_003411527.1;gbkey=CDS;gene=ahpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216754.1;locus_tag=AL55_RS16960;product=peroxiredoxin AhpE;protein_id=WP_003411527.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2510509 2510931 . - . ID=gene-AL55_RS16965;Name=AL55_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16965;old_locus_tag=AL55_02315 NZ_KK316828.1 Protein Homology CDS 2510509 2510931 . - 0 ID=cds-WP_003911787.1;Parent=gene-AL55_RS16965;Dbxref=GenBank:WP_003911787.1;Name=WP_003911787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911787.1;locus_tag=AL55_RS16965;product=DUF3052 domain-containing protein;protein_id=WP_003911787.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2511023 2511613 . - . ID=gene-AL55_RS16970;Name=AL55_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16970;old_locus_tag=AL55_02316 NZ_KK316828.1 Protein Homology CDS 2511023 2511613 . - 0 ID=cds-WP_003911826.1;Parent=gene-AL55_RS16970;Dbxref=GenBank:WP_003911826.1;Name=WP_003911826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216756.2;locus_tag=AL55_RS16970;product=hypothetical protein;protein_id=WP_003911826.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2511785 2514577 . + . ID=gene-AL55_RS16975;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AL55_RS16975;old_locus_tag=AL55_02317 NZ_KK316828.1 Protein Homology CDS 2511785 2514577 . + 0 ID=cds-WP_003911788.1;Parent=gene-AL55_RS16975;Dbxref=GenBank:WP_003911788.1;Name=WP_003911788.1;Ontology_term=GO:0006086,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911788.1;locus_tag=AL55_RS16975;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_003911788.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2514637 2515881 . + . ID=gene-AL55_RS16980;Name=AL55_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS16980;old_locus_tag=AL55_02318 NZ_KK316828.1 Protein Homology CDS 2514637 2515881 . + 0 ID=cds-WP_003411543.1;Parent=gene-AL55_RS16980;Dbxref=GenBank:WP_003411543.1;Name=WP_003411543.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216758.1;locus_tag=AL55_RS16980;product=PucR family transcriptional regulator;protein_id=WP_003411543.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2516120 2517028 . + . ID=gene-AL55_RS16985;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AL55_RS16985;old_locus_tag=AL55_02319 NZ_KK316828.1 Protein Homology CDS 2516120 2517028 . + 0 ID=cds-WP_003411559.1;Parent=gene-AL55_RS16985;Dbxref=GenBank:WP_003411559.1;Name=WP_003411559.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216759.1;locus_tag=AL55_RS16985;product=malonyl CoA-acyl carrier protein transacylase;protein_id=WP_003411559.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2517104 2517451 . + . ID=gene-AL55_RS16990;Name=acpM;gbkey=Gene;gene=acpM;gene_biotype=protein_coding;locus_tag=AL55_RS16990;old_locus_tag=AL55_02320 NZ_KK316828.1 Protein Homology CDS 2517104 2517451 . + 0 ID=cds-WP_003411565.1;Parent=gene-AL55_RS16990;Dbxref=GenBank:WP_003411565.1;Name=WP_003411565.1;Ontology_term=GO:0071768;gbkey=CDS;gene=acpM;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216760.1;locus_tag=AL55_RS16990;product=meromycolate extension acyl carrier protein AcpM;protein_id=WP_003411565.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2517448 2518698 . + . ID=gene-AL55_RS16995;Name=kasA;gbkey=Gene;gene=kasA;gene_biotype=protein_coding;locus_tag=AL55_RS16995;old_locus_tag=AL55_02321 NZ_KK316828.1 Protein Homology CDS 2517448 2518698 . + 0 ID=cds-WP_003411571.1;Parent=gene-AL55_RS16995;Dbxref=GenBank:WP_003411571.1;Name=WP_003411571.1;gbkey=CDS;gene=kasA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216761.1;locus_tag=AL55_RS16995;product=3-oxoacyl-ACP synthase KasA;protein_id=WP_003411571.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2518792 2520045 . + . ID=gene-AL55_RS17000;Name=kasB;gbkey=Gene;gene=kasB;gene_biotype=protein_coding;locus_tag=AL55_RS17000;old_locus_tag=AL55_02322 NZ_KK316828.1 Protein Homology CDS 2518792 2520045 . + 0 ID=cds-WP_003411576.1;Parent=gene-AL55_RS17000;Dbxref=GenBank:WP_003411576.1;Name=WP_003411576.1;gbkey=CDS;gene=kasB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411576.1;locus_tag=AL55_RS17000;product=3-oxoacyl-ACP synthase KasB;protein_id=WP_003411576.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2520076 2521497 . + . ID=gene-AL55_RS17005;Name=AL55_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17005;old_locus_tag=AL55_02323 NZ_KK316828.1 Protein Homology CDS 2520076 2521497 . + 0 ID=cds-WP_003901360.1;Parent=gene-AL55_RS17005;Dbxref=GenBank:WP_003901360.1;Name=WP_003901360.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216763.1;locus_tag=AL55_RS17005;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003901360.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2521621 2522508 . + . ID=gene-AL55_RS17010;Name=AL55_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17010;old_locus_tag=AL55_02324 NZ_KK316828.1 Protein Homology CDS 2521621 2522508 . + 0 ID=cds-WP_014584819.1;Parent=gene-AL55_RS17010;Dbxref=GenBank:WP_014584819.1;Name=WP_014584819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584819.1;locus_tag=AL55_RS17010;product=hypothetical protein;protein_id=WP_014584819.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2522577 2524127 . - . ID=gene-AL55_RS17015;Name=AL55_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17015;old_locus_tag=AL55_02325 NZ_KK316828.1 Protein Homology CDS 2522577 2524127 . - 0 ID=cds-WP_003411591.1;Parent=gene-AL55_RS17015;Dbxref=GenBank:WP_003411591.1;Name=WP_003411591.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216765.1;locus_tag=AL55_RS17015;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_003411591.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2524121 2524690 . - . ID=gene-AL55_RS17020;Name=AL55_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17020;old_locus_tag=AL55_02326 NZ_KK316828.1 Protein Homology CDS 2524121 2524690 . - 0 ID=cds-WP_003411595.1;Parent=gene-AL55_RS17020;Dbxref=GenBank:WP_003411595.1;Name=WP_003411595.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216766.2;locus_tag=AL55_RS17020;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003411595.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2524738 2526327 . + . ID=gene-AL55_RS17025;Name=AL55_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17025;old_locus_tag=AL55_02327 NZ_KK316828.1 Protein Homology CDS 2524738 2526327 . + 0 ID=cds-WP_003411596.1;Parent=gene-AL55_RS17025;Dbxref=GenBank:WP_003411596.1;Name=WP_003411596.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015575176.1;locus_tag=AL55_RS17025;product=FAD-binding oxidoreductase;protein_id=WP_003411596.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2526324 2527253 . + . ID=gene-AL55_RS17030;Name=AL55_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17030;old_locus_tag=AL55_02328 NZ_KK316828.1 Protein Homology CDS 2526324 2527253 . + 0 ID=cds-WP_003411603.1;Parent=gene-AL55_RS17030;Dbxref=GenBank:WP_003411603.1;Name=WP_003411603.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216768.1;locus_tag=AL55_RS17030;product=diacylglycerol kinase;protein_id=WP_003411603.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2527319 2527822 . + . ID=gene-AL55_RS17035;Name=AL55_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17035;old_locus_tag=AL55_02329 NZ_KK316828.1 Protein Homology CDS 2527319 2527822 . + 0 ID=cds-WP_003411608.1;Parent=gene-AL55_RS17035;Dbxref=GenBank:WP_003411608.1;Name=WP_003411608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216769.1;locus_tag=AL55_RS17035;product=Rv2253 family sensor-like surface protein;protein_id=WP_003411608.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2527855 2528310 . - . ID=gene-AL55_RS17040;Name=AL55_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17040;old_locus_tag=AL55_02330 NZ_KK316828.1 Protein Homology CDS 2527855 2528310 . - 0 ID=cds-WP_003411611.1;Parent=gene-AL55_RS17040;Dbxref=GenBank:WP_003411611.1;Name=WP_003411611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216770.1;locus_tag=AL55_RS17040;product=LysE family transporter;protein_id=WP_003411611.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2528315 2528509 . - . ID=gene-AL55_RS17045;Name=AL55_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17045;old_locus_tag=AL55_02331 NZ_KK316828.1 Protein Homology CDS 2528315 2528509 . - 0 ID=cds-WP_003902152.1;Parent=gene-AL55_RS17045;Dbxref=GenBank:WP_003902152.1;Name=WP_003902152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030037.1;locus_tag=AL55_RS17045;product=hypothetical protein;protein_id=WP_003902152.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2528429 2528647 . + . ID=gene-AL55_RS17050;Name=AL55_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17050;old_locus_tag=AL55_02332 NZ_KK316828.1 Protein Homology CDS 2528429 2528647 . + 0 ID=cds-WP_003411612.1;Parent=gene-AL55_RS17050;Dbxref=GenBank:WP_003411612.1;Name=WP_003411612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411612.1;locus_tag=AL55_RS17050;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=WP_003411612.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2528676 2529188 . - . ID=gene-AL55_RS17055;Name=AL55_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17055;old_locus_tag=AL55_02333 NZ_KK316828.1 Protein Homology CDS 2528676 2529188 . - 0 ID=cds-WP_003411615.1;Parent=gene-AL55_RS17055;Dbxref=GenBank:WP_003411615.1;Name=WP_003411615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005085219.1;locus_tag=AL55_RS17055;product=DUF3145 domain-containing protein;protein_id=WP_003411615.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2529339 2530157 . - . ID=gene-AL55_RS17060;Name=AL55_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17060;old_locus_tag=AL55_02334 NZ_KK316828.1 Protein Homology CDS 2529339 2530157 . - 0 ID=cds-WP_003411619.1;Parent=gene-AL55_RS17060;Dbxref=GenBank:WP_003411619.1;Name=WP_003411619.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216773.1;locus_tag=AL55_RS17060;product=serine hydrolase domain-containing protein;protein_id=WP_003411619.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2530171 2531232 . - . ID=gene-AL55_RS17065;Name=AL55_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17065;old_locus_tag=AL55_02335 NZ_KK316828.1 Protein Homology CDS 2530171 2531232 . - 0 ID=cds-WP_003411622.1;Parent=gene-AL55_RS17065;Dbxref=GenBank:WP_003411622.1;Name=WP_003411622.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216774.1;locus_tag=AL55_RS17065;product=class I SAM-dependent methyltransferase;protein_id=WP_003411622.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2531580 2532665 . + . ID=gene-AL55_RS17070;Name=mscR;gbkey=Gene;gene=mscR;gene_biotype=protein_coding;locus_tag=AL55_RS17070;old_locus_tag=AL55_02336 NZ_KK316828.1 Protein Homology CDS 2531580 2532665 . + 0 ID=cds-WP_003899236.1;Parent=gene-AL55_RS17070;Dbxref=GenBank:WP_003899236.1;Name=WP_003899236.1;Ontology_term=GO:0010127,GO:0050607;gbkey=CDS;gene=mscR;go_function=mycothiol-dependent formaldehyde dehydrogenase activity|0050607||IEA;go_process=mycothiol-dependent detoxification|0010127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216775.1;locus_tag=AL55_RS17070;product=S-(hydroxymethyl)mycothiol dehydrogenase;protein_id=WP_003899236.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2532665 2533300 . + . ID=gene-AL55_RS17075;Name=AL55_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17075;old_locus_tag=AL55_02337 NZ_KK316828.1 Protein Homology CDS 2532665 2533300 . + 0 ID=cds-WP_003411632.1;Parent=gene-AL55_RS17075;Dbxref=GenBank:WP_003411632.1;Name=WP_003411632.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216776.1;locus_tag=AL55_RS17075;product=MBL fold metallo-hydrolase;protein_id=WP_003411632.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2533377 2534762 . - . ID=gene-AL55_RS17080;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AL55_RS17080;old_locus_tag=AL55_02338 NZ_KK316828.1 Protein Homology CDS 2533377 2534762 . - 0 ID=cds-WP_019249811.1;Parent=gene-AL55_RS17080;Dbxref=GenBank:WP_019249811.1;Name=WP_019249811.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019249811.1;locus_tag=AL55_RS17080;product=apolipoprotein N-acyltransferase;protein_id=WP_019249811.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2534765 2535217 . + . ID=gene-AL55_RS17085;Name=AL55_RS17085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS17085;old_locus_tag=AL55_02339;partial=true;pseudo=true;start_range=.,2534765 NZ_KK316828.1 Protein Homology CDS 2534765 2535217 . + 0 ID=cds-AL55_RS17085;Parent=gene-AL55_RS17085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216779.1;locus_tag=AL55_RS17085;partial=true;product=short chain dehydrogenase;pseudo=true;start_range=.,2534765;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2535195 2536974 . - . ID=gene-AL55_RS17090;Name=AL55_RS17090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS17090;old_locus_tag=AL55_02340;pseudo=true NZ_KK316828.1 Protein Homology CDS 2535195 2536974 . - 0 ID=cds-AL55_RS17090;Parent=gene-AL55_RS17090;Note=frameshifted;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216780.1;locus_tag=AL55_RS17090;product=Hsp70 family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2537324 2538553 . + . ID=gene-AL55_RS17095;Name=AL55_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17095;old_locus_tag=AL55_02341 NZ_KK316828.1 Protein Homology CDS 2537324 2538553 . + 0 ID=cds-WP_003899241.1;Parent=gene-AL55_RS17095;Dbxref=GenBank:WP_003899241.1;Name=WP_003899241.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216781.1;locus_tag=AL55_RS17095;product=MFS transporter;protein_id=WP_003899241.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2538728 2540014 . + . ID=gene-AL55_RS17100;Name=cyp124;gbkey=Gene;gene=cyp124;gene_biotype=protein_coding;locus_tag=AL55_RS17100;old_locus_tag=AL55_02342 NZ_KK316828.1 Protein Homology CDS 2538728 2540014 . + 0 ID=cds-WP_003411654.1;Parent=gene-AL55_RS17100;Dbxref=GenBank:WP_003411654.1;Name=WP_003411654.1;gbkey=CDS;gene=cyp124;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216782.1;locus_tag=AL55_RS17100;product=methyl-branched lipid omega-hydroxylase Cyp124;protein_id=WP_003411654.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2540268 2541434 . - . ID=gene-AL55_RS17105;Name=AL55_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17105;old_locus_tag=AL55_02343 NZ_KK316828.1 Protein Homology CDS 2540268 2541434 . - 0 ID=cds-WP_003411661.1;Parent=gene-AL55_RS17105;Dbxref=GenBank:WP_003411661.1;Name=WP_003411661.1;Ontology_term=GO:0008146,GO:0050656,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfotransferase activity|0008146||IEA,3'-phosphoadenosine 5'-phosphosulfate binding|0050656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216783.1;locus_tag=AL55_RS17105;product=sulfotransferase family protein;protein_id=WP_003411661.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2541431 2542900 . - . ID=gene-AL55_RS17110;Name=AL55_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17110;old_locus_tag=AL55_02344 NZ_KK316828.1 Protein Homology CDS 2541431 2542900 . - 0 ID=cds-WP_031695418.1;Parent=gene-AL55_RS17110;Dbxref=GenBank:WP_031695418.1;Name=WP_031695418.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216784.1;locus_tag=AL55_RS17110;product=cytochrome P450;protein_id=WP_031695418.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2542913 2543245 . - . ID=gene-AL55_RS17115;Name=AL55_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17115;old_locus_tag=AL55_02345 NZ_KK316828.1 Protein Homology CDS 2542913 2543245 . - 0 ID=cds-WP_003902155.1;Parent=gene-AL55_RS17115;Dbxref=GenBank:WP_003902155.1;Name=WP_003902155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216785.1;locus_tag=AL55_RS17115;product=hypothetical protein;protein_id=WP_003902155.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2543322 2543849 . + . ID=gene-AL55_RS17120;Name=AL55_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17120;old_locus_tag=AL55_02346 NZ_KK316828.1 Protein Homology CDS 2543322 2543849 . + 0 ID=cds-WP_003411668.1;Parent=gene-AL55_RS17120;Dbxref=GenBank:WP_003411668.1;Name=WP_003411668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216786.1;locus_tag=AL55_RS17120;product=hypothetical protein;protein_id=WP_003411668.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2543956 2544255 . + . ID=gene-AL55_RS17125;Name=AL55_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17125;old_locus_tag=AL55_02347 NZ_KK316828.1 Protein Homology CDS 2543956 2544255 . + 0 ID=cds-WP_003899242.1;Parent=gene-AL55_RS17125;Dbxref=GenBank:WP_003899242.1;Name=WP_003899242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216787.1;locus_tag=AL55_RS17125;product=DUF2695 domain-containing protein;protein_id=WP_003899242.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2544361 2544729 . + . ID=gene-AL55_RS17130;Name=AL55_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17130;old_locus_tag=AL55_02348 NZ_KK316828.1 Protein Homology CDS 2544361 2544729 . + 0 ID=cds-WP_003411674.1;Parent=gene-AL55_RS17130;Dbxref=GenBank:WP_003411674.1;Name=WP_003411674.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216788.1;locus_tag=AL55_RS17130;product=YidH family protein;protein_id=WP_003411674.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2544726 2545055 . + . ID=gene-AL55_RS17135;Name=AL55_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17135;old_locus_tag=AL55_02349 NZ_KK316828.1 Protein Homology CDS 2544726 2545055 . + 0 ID=cds-WP_003411678.1;Parent=gene-AL55_RS17135;Dbxref=GenBank:WP_003411678.1;Name=WP_003411678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216789.1;locus_tag=AL55_RS17135;product=DUF202 domain-containing protein;protein_id=WP_003411678.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2545112 2545429 . - . ID=gene-AL55_RS17140;Name=AL55_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17140;old_locus_tag=AL55_02350 NZ_KK316828.1 Protein Homology CDS 2545112 2545429 . - 0 ID=cds-WP_003902157.1;Parent=gene-AL55_RS17140;Dbxref=GenBank:WP_003902157.1;Name=WP_003902157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216790.1;locus_tag=AL55_RS17140;product=hypothetical protein;protein_id=WP_003902157.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2545463 2545711 . - . ID=gene-AL55_RS27735;Name=mazE8;gbkey=Gene;gene=mazE8;gene_biotype=protein_coding;locus_tag=AL55_RS27735;old_locus_tag=AL55_02351 NZ_KK316828.1 Protein Homology CDS 2545463 2545711 . - 0 ID=cds-WP_003903832.1;Parent=gene-AL55_RS27735;Dbxref=GenBank:WP_003903832.1;Name=WP_003903832.1;gbkey=CDS;gene=mazE8;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410963.1;locus_tag=AL55_RS27735;product=type II toxin-antitoxin system antitoxin MazE8;protein_id=WP_003903832.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2545732 2546376 . + . ID=gene-AL55_RS17145;Name=AL55_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17145;old_locus_tag=AL55_02352 NZ_KK316828.1 Protein Homology CDS 2545732 2546376 . + 0 ID=cds-WP_229303148.1;Parent=gene-AL55_RS17145;Dbxref=GenBank:WP_229303148.1;Name=WP_229303148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04539.1;locus_tag=AL55_RS17145;product=cyclodityrosine synthase;protein_id=WP_229303148.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2546373 2547563 . + . ID=gene-AL55_RS17150;Name=cyp121;gbkey=Gene;gene=cyp121;gene_biotype=protein_coding;locus_tag=AL55_RS17150;old_locus_tag=AL55_02353 NZ_KK316828.1 Protein Homology CDS 2546373 2547563 . + 0 ID=cds-WP_003901366.1;Parent=gene-AL55_RS17150;Dbxref=GenBank:WP_003901366.1;Name=WP_003901366.1;gbkey=CDS;gene=cyp121;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216792.1;locus_tag=AL55_RS17150;product=mycocyclosin synthase Cyp121;protein_id=WP_003901366.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2547748 2548647 . - . ID=gene-AL55_RS17155;Name=AL55_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17155;old_locus_tag=AL55_02354 NZ_KK316828.1 Protein Homology CDS 2547748 2548647 . - 0 ID=cds-WP_003411688.1;Parent=gene-AL55_RS17155;Dbxref=GenBank:WP_003411688.1;Name=WP_003411688.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411688.1;locus_tag=AL55_RS17155;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_003411688.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2548826 2550205 . + . ID=gene-AL55_RS17160;Name=AL55_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17160;old_locus_tag=AL55_02355 NZ_KK316828.1 Protein Homology CDS 2548826 2550205 . + 0 ID=cds-WP_003905801.1;Parent=gene-AL55_RS17160;Dbxref=GenBank:WP_003905801.1;Name=WP_003905801.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293581.1;locus_tag=AL55_RS17160;product=FAD-binding oxidoreductase;protein_id=WP_003905801.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2550439 2552097 . + . ID=gene-AL55_RS17165;Name=pitB;gbkey=Gene;gene=pitB;gene_biotype=protein_coding;locus_tag=AL55_RS17165;old_locus_tag=AL55_02356 NZ_KK316828.1 Protein Homology CDS 2550439 2552097 . + 0 ID=cds-WP_003411694.1;Parent=gene-AL55_RS17165;Dbxref=GenBank:WP_003411694.1;Name=WP_003411694.1;Ontology_term=GO:0006817,GO:0005315,GO:0016020;gbkey=CDS;gene=pitB;go_component=membrane|0016020||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216797.1;locus_tag=AL55_RS17165;product=inorganic phosphate transporter;protein_id=WP_003411694.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2552204 2553142 . - . ID=gene-AL55_RS17170;Name=AL55_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17170;old_locus_tag=AL55_02357 NZ_KK316828.1 Protein Homology CDS 2552204 2553142 . - 0 ID=cds-WP_003411696.1;Parent=gene-AL55_RS17170;Dbxref=GenBank:WP_003411696.1;Name=WP_003411696.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216798.1;locus_tag=AL55_RS17170;product=LysR family transcriptional regulator;protein_id=WP_003411696.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2553191 2553412 . - . ID=gene-AL55_RS28240;Name=AL55_RS28240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28240 NZ_KK316828.1 GeneMarkS-2+ CDS 2553191 2553412 . - 0 ID=cds-WP_015385286.1;Parent=gene-AL55_RS28240;Dbxref=GenBank:WP_015385286.1;Name=WP_015385286.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS28240;product=hypothetical protein;protein_id=WP_015385286.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2553411 2554706 . + . ID=gene-AL55_RS17175;Name=lipM;gbkey=Gene;gene=lipM;gene_biotype=protein_coding;locus_tag=AL55_RS17175;old_locus_tag=AL55_02359 NZ_KK316828.1 Protein Homology CDS 2553411 2554706 . + 0 ID=cds-WP_003899248.1;Parent=gene-AL55_RS17175;Dbxref=GenBank:WP_003899248.1;Name=WP_003899248.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipM;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216800.1;locus_tag=AL55_RS17175;product=alpha/beta hydrolase;protein_id=WP_003899248.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2554739 2556076 . + . ID=gene-AL55_RS17180;Name=AL55_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17180;old_locus_tag=AL55_02360 NZ_KK316828.1 Protein Homology CDS 2554739 2556076 . + 0 ID=cds-WP_003411704.1;Parent=gene-AL55_RS17180;Dbxref=GenBank:WP_003411704.1;Name=WP_003411704.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216801.1;locus_tag=AL55_RS17180;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003411704.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2556143 2556835 . - . ID=gene-AL55_RS17185;Name=AL55_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17185;old_locus_tag=AL55_02361 NZ_KK316828.1 Protein Homology CDS 2556143 2556835 . - 0 ID=cds-WP_003411707.1;Parent=gene-AL55_RS17185;Dbxref=GenBank:WP_003411707.1;Name=WP_003411707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216802.1;locus_tag=AL55_RS17185;product=mycothiol-dependent nitroreductase Rv2466c family protein;protein_id=WP_003411707.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2557005 2558597 . + . ID=gene-AL55_RS17190;Name=yjcE;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;locus_tag=AL55_RS17190;old_locus_tag=AL55_02362 NZ_KK316828.1 Protein Homology CDS 2557005 2558597 . + 0 ID=cds-WP_003916985.1;Parent=gene-AL55_RS17190;Dbxref=GenBank:WP_003916985.1;Name=WP_003916985.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;gene=yjcE;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916985.1;locus_tag=AL55_RS17190;product=Na+/H+ antiporter;protein_id=WP_003916985.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2558594 2558971 . + . ID=gene-AL55_RS17195;Name=AL55_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17195;old_locus_tag=AL55_02363 NZ_KK316828.1 Protein Homology CDS 2558594 2558971 . + 0 ID=cds-WP_003900492.1;Parent=gene-AL55_RS17195;Dbxref=GenBank:WP_003900492.1;Name=WP_003900492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216804.1;locus_tag=AL55_RS17195;product=hypothetical protein;protein_id=WP_003900492.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2558941 2559723 . + . ID=gene-AL55_RS17200;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;locus_tag=AL55_RS17200;old_locus_tag=AL55_02364 NZ_KK316828.1 Protein Homology CDS 2558941 2559723 . + 0 ID=cds-WP_003411717.1;Parent=gene-AL55_RS17200;Dbxref=GenBank:WP_003411717.1;Name=WP_003411717.1;gbkey=CDS;gene=cdh;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216805.1;locus_tag=AL55_RS17200;product=CDP-diacylglycerol diphosphatase;protein_id=WP_003411717.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2559865 2560380 . + . ID=gene-AL55_RS17205;Name=lppO;gbkey=Gene;gene=lppO;gene_biotype=protein_coding;locus_tag=AL55_RS17205;old_locus_tag=AL55_02365 NZ_KK316828.1 Protein Homology CDS 2559865 2560380 . + 0 ID=cds-WP_003901367.1;Parent=gene-AL55_RS17205;Dbxref=GenBank:WP_003901367.1;Name=WP_003901367.1;Ontology_term=GO:0016020;gbkey=CDS;gene=lppO;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216806.1;locus_tag=AL55_RS17205;product=lipoprotein LpqH;protein_id=WP_003901367.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2560440 2561294 . + . ID=gene-AL55_RS17210;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=AL55_RS17210;old_locus_tag=AL55_02366 NZ_KK316828.1 Protein Homology CDS 2560440 2561294 . + 0 ID=cds-WP_003899253.1;Parent=gene-AL55_RS17210;Dbxref=GenBank:WP_003899253.1;Name=WP_003899253.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;gene=sseB;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216807.1;locus_tag=AL55_RS17210;product=sulfurtransferase;protein_id=WP_003899253.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2561295 2562269 . - . ID=gene-AL55_RS0105075;Name=AL55_RS0105075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105075;old_locus_tag=AL55_02368 NZ_KK316828.1 Protein Homology CDS 2561295 2562269 . - 0 ID=cds-WP_003901369.1;Parent=gene-AL55_RS0105075;Dbxref=GenBank:WP_003901369.1;Name=WP_003901369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901369.1;locus_tag=AL55_RS0105075;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase family protein;protein_id=WP_003901369.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2562594 2563817 . + . ID=gene-AL55_RS17220;Name=AL55_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17220;old_locus_tag=AL55_02369 NZ_KK316828.1 Protein Homology CDS 2562594 2563817 . + 0 ID=cds-WP_003899255.1;Parent=gene-AL55_RS17220;Dbxref=GenBank:WP_003899255.1;Name=WP_003899255.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216810.1;locus_tag=AL55_RS17220;product=MalY/PatB family protein;protein_id=WP_003899255.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2564040 2564678 . + . ID=gene-AL55_RS17225;Name=AL55_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17225;old_locus_tag=AL55_02370 NZ_KK316828.1 Protein Homology CDS 2564040 2564678 . + 0 ID=cds-WP_003899256.1;Parent=gene-AL55_RS17225;Dbxref=GenBank:WP_003899256.1;Name=WP_003899256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216811.1;locus_tag=AL55_RS17225;product=CbrC family protein;protein_id=WP_003899256.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2564772 2565674 . + . ID=gene-AL55_RS17230;Name=AL55_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17230;old_locus_tag=AL55_02371 NZ_KK316828.1 Protein Homology CDS 2564772 2565674 . + 0 ID=cds-WP_003411849.1;Parent=gene-AL55_RS17230;Dbxref=GenBank:WP_003411849.1;Name=WP_003411849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216812.1;locus_tag=AL55_RS17230;product=haloalkane dehalogenase;protein_id=WP_003411849.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2565706 2566158 . + . ID=gene-AL55_RS17235;Name=AL55_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17235;old_locus_tag=AL55_02372 NZ_KK316828.1 Protein Homology CDS 2565706 2566158 . + 0 ID=cds-WP_003411851.1;Parent=gene-AL55_RS17235;Dbxref=GenBank:WP_003411851.1;Name=WP_003411851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216813.1;locus_tag=AL55_RS17235;product=hypothetical protein;protein_id=WP_003411851.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2566350 2567321 . + . ID=gene-AL55_RS17240;Name=AL55_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17240;old_locus_tag=AL55_02373 NZ_KK316828.1 Protein Homology CDS 2566350 2567321 . + 0 ID=cds-WP_003902161.1;Parent=gene-AL55_RS17240;Dbxref=GenBank:WP_003902161.1;Name=WP_003902161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216814.1;locus_tag=AL55_RS17240;product=aldo/keto reductase;protein_id=WP_003902161.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2567327 2569270 . - . ID=gene-AL55_RS17245;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AL55_RS17245;old_locus_tag=AL55_02374 NZ_KK316828.1 Protein Homology CDS 2567327 2569270 . - 0 ID=cds-WP_003411855.1;Parent=gene-AL55_RS17245;Dbxref=GenBank:WP_003411855.1;Name=WP_003411855.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216815.1;locus_tag=AL55_RS17245;product=molecular chaperone HtpG;protein_id=WP_003411855.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2569344 2570126 . - . ID=gene-AL55_RS17250;Name=AL55_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17250;old_locus_tag=AL55_02375 NZ_KK316828.1 Protein Homology CDS 2569344 2570126 . - 0 ID=cds-WP_003911838.1;Parent=gene-AL55_RS17250;Dbxref=GenBank:WP_003911838.1;Name=WP_003911838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911838.1;locus_tag=AL55_RS17250;product=MBL fold metallo-hydrolase;protein_id=WP_003911838.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2570283 2570975 . + . ID=gene-AL55_RS17255;Name=AL55_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17255;old_locus_tag=AL55_02376 NZ_KK316828.1 Protein Homology CDS 2570283 2570975 . + 0 ID=cds-WP_003411863.1;Parent=gene-AL55_RS17255;Dbxref=GenBank:WP_003411863.1;Name=WP_003411863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216817.2;locus_tag=AL55_RS17255;product=cutinase family protein;protein_id=WP_003411863.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2571081 2571323 . + . ID=gene-AL55_RS17260;Name=AL55_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17260;old_locus_tag=AL55_02377 NZ_KK316828.1 Protein Homology CDS 2571081 2571323 . + 0 ID=cds-WP_003411866.1;Parent=gene-AL55_RS17260;Dbxref=GenBank:WP_003411866.1;Name=WP_003411866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216818.1;locus_tag=AL55_RS17260;product=DUF1918 domain-containing protein;protein_id=WP_003411866.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2571364 2572287 . - . ID=gene-AL55_RS17265;Name=AL55_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17265;old_locus_tag=AL55_02378 NZ_KK316828.1 Protein Homology CDS 2571364 2572287 . - 0 ID=cds-WP_003411868.1;Parent=gene-AL55_RS17265;Dbxref=GenBank:WP_003411868.1;Name=WP_003411868.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216819.1;locus_tag=AL55_RS17265;product=amidohydrolase family protein;protein_id=WP_003411868.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2572284 2572493 . - . ID=gene-AL55_RS17270;Name=AL55_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17270;old_locus_tag=AL55_02379 NZ_KK316828.1 Protein Homology CDS 2572284 2572493 . - 0 ID=cds-WP_003411870.1;Parent=gene-AL55_RS17270;Dbxref=GenBank:WP_003411870.1;Name=WP_003411870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216820.1;locus_tag=AL55_RS17270;product=hypothetical protein;protein_id=WP_003411870.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2573077 2574366 . + . ID=gene-AL55_RS17275;Name=AL55_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17275;old_locus_tag=AL55_02380 NZ_KK316828.1 Protein Homology CDS 2573077 2574366 . + 0 ID=cds-WP_003899261.1;Parent=gene-AL55_RS17275;Dbxref=GenBank:WP_003899261.1;Name=WP_003899261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216821.1;locus_tag=AL55_RS17275;product=hypothetical protein;protein_id=WP_003899261.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2574376 2575031 . + . ID=gene-AL55_RS27480;Name=AL55_RS27480;end_range=2575031,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27480;old_locus_tag=AL55_02381;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 2574376 2575031 . + 0 ID=cds-AL55_RS27480;Parent=gene-AL55_RS27480;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;end_range=2575031,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015305669.1;locus_tag=AL55_RS27480;partial=true;product=TVP38/TMEM64 family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2575119 2575964 . - . ID=gene-AL55_RS17285;Name=AL55_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17285;old_locus_tag=AL55_02383 NZ_KK316828.1 Protein Homology CDS 2575119 2575964 . - 0 ID=cds-WP_003902165.1;Parent=gene-AL55_RS17285;Dbxref=GenBank:WP_003902165.1;Name=WP_003902165.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216823.1;locus_tag=AL55_RS17285;product=alpha/beta hydrolase;protein_id=WP_003902165.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2576121 2576465 . - . ID=gene-AL55_RS26180;Name=AL55_RS26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26180 NZ_KK316828.1 Protein Homology CDS 2576121 2576465 . - 0 ID=cds-WP_071854221.1;Parent=gene-AL55_RS26180;Dbxref=GenBank:WP_071854221.1;Name=WP_071854221.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024001.6;locus_tag=AL55_RS26180;product=DUF3761 domain-containing protein;protein_id=WP_071854221.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2576496 2576687 . - . ID=gene-AL55_RS17290;Name=AL55_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17290;old_locus_tag=AL55_02384 NZ_KK316828.1 Protein Homology CDS 2576496 2576687 . - 0 ID=cds-WP_003899264.1;Parent=gene-AL55_RS17290;Dbxref=GenBank:WP_003899264.1;Name=WP_003899264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177665.1;locus_tag=AL55_RS17290;product=hypothetical protein;protein_id=WP_003899264.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2576772 2577203 . - . ID=gene-AL55_RS17295;Name=AL55_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17295;old_locus_tag=AL55_02385 NZ_KK316828.1 Protein Homology CDS 2576772 2577203 . - 0 ID=cds-WP_003899265.1;Parent=gene-AL55_RS17295;Dbxref=GenBank:WP_003899265.1;Name=WP_003899265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177666.1;locus_tag=AL55_RS17295;product=hypothetical protein;protein_id=WP_003899265.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2577296 2577478 . - . ID=gene-AL55_RS17300;Name=AL55_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17300;old_locus_tag=AL55_02386 NZ_KK316828.1 Protein Homology CDS 2577296 2577478 . - 0 ID=cds-WP_003902166.1;Parent=gene-AL55_RS17300;Dbxref=GenBank:WP_003902166.1;Name=WP_003902166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177667.1;locus_tag=AL55_RS17300;product=hypothetical protein;protein_id=WP_003902166.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2577687 2578403 . + . ID=gene-AL55_RS17305;Name=AL55_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17305;old_locus_tag=AL55_02387 NZ_KK316828.1 Protein Homology CDS 2577687 2578403 . + 0 ID=cds-WP_003902167.1;Parent=gene-AL55_RS17305;Dbxref=GenBank:WP_003902167.1;Name=WP_003902167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216824.1;locus_tag=AL55_RS17305;product=DUF433 domain-containing protein;protein_id=WP_003902167.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2578413 2578745 . + . ID=gene-AL55_RS0105080;Name=AL55_RS0105080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105080 NZ_KK316828.1 Protein Homology CDS 2578413 2578745 . + 0 ID=cds-WP_003411888.1;Parent=gene-AL55_RS0105080;Dbxref=GenBank:WP_003411888.1;Name=WP_003411888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030038.1;locus_tag=AL55_RS0105080;product=hypothetical protein;protein_id=WP_003411888.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2579032 2579105 . - . ID=gene-AL55_RS17310;Name=AL55_RS17310;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS17310;old_locus_tag=AL55_02388 NZ_KK316828.1 tRNAscan-SE tRNA 2579032 2579105 . - . ID=rna-AL55_RS17310;Parent=gene-AL55_RS17310;anticodon=(pos:complement(2579069..2579071));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS17310;product=tRNA-Ile NZ_KK316828.1 tRNAscan-SE exon 2579032 2579105 . - . ID=exon-AL55_RS17310-1;Parent=rna-AL55_RS17310;anticodon=(pos:complement(2579069..2579071));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS17310;product=tRNA-Ile NZ_KK316828.1 RefSeq gene 2579111 2579566 . - . ID=gene-AL55_RS17315;Name=AL55_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17315;old_locus_tag=AL55_02389 NZ_KK316828.1 Protein Homology CDS 2579111 2579566 . - 0 ID=cds-WP_003899267.1;Parent=gene-AL55_RS17315;Dbxref=GenBank:WP_003899267.1;Name=WP_003899267.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901373.1;locus_tag=AL55_RS17315;product=site-specific integrase;protein_id=WP_003899267.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2579745 2579912 . - . ID=gene-AL55_RS27340;Name=AL55_RS27340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27340;old_locus_tag=AL55_02390 NZ_KK316828.1 Protein Homology CDS 2579745 2579912 . - 0 ID=cds-WP_003907913.1;Parent=gene-AL55_RS27340;Dbxref=GenBank:WP_003907913.1;Name=WP_003907913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003907913.1;locus_tag=AL55_RS27340;product=hypothetical protein;protein_id=WP_003907913.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2580313 2580600 . + . ID=gene-AL55_RS17320;Name=AL55_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17320;old_locus_tag=AL55_02391 NZ_KK316828.1 Protein Homology CDS 2580313 2580600 . + 0 ID=cds-WP_003902168.1;Parent=gene-AL55_RS17320;Dbxref=GenBank:WP_003902168.1;Name=WP_003902168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177668.1;locus_tag=AL55_RS17320;product=hypothetical protein;protein_id=WP_003902168.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2580706 2581047 . + . ID=gene-AL55_RS17325;Name=AL55_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17325;old_locus_tag=AL55_02392 NZ_KK316828.1 Protein Homology CDS 2580706 2581047 . + 0 ID=cds-WP_003901374.1;Parent=gene-AL55_RS17325;Dbxref=GenBank:WP_003901374.1;Name=WP_003901374.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901374.1;locus_tag=AL55_RS17325;product=helix-turn-helix domain-containing protein;protein_id=WP_003901374.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2581080 2581676 . + . ID=gene-AL55_RS17330;Name=AL55_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17330;old_locus_tag=AL55_02393 NZ_KK316828.1 Protein Homology CDS 2581080 2581676 . + 0 ID=cds-WP_003899268.1;Parent=gene-AL55_RS17330;Dbxref=GenBank:WP_003899268.1;Name=WP_003899268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585278.1;locus_tag=AL55_RS17330;product=hypothetical protein;protein_id=WP_003899268.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2581754 2582023 . + . ID=gene-AL55_RS17335;Name=AL55_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17335;old_locus_tag=AL55_02394 NZ_KK316828.1 Protein Homology CDS 2581754 2582023 . + 0 ID=cds-WP_003411919.1;Parent=gene-AL55_RS17335;Dbxref=GenBank:WP_003411919.1;Name=WP_003411919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216828.1;locus_tag=AL55_RS17335;product=hypothetical protein;protein_id=WP_003411919.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2582320 2583174 . - . ID=gene-AL55_RS17340;Name=AL55_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17340;old_locus_tag=AL55_02395 NZ_KK316828.1 Protein Homology CDS 2582320 2583174 . - 0 ID=cds-WP_003411924.1;Parent=gene-AL55_RS17340;Dbxref=GenBank:WP_003411924.1;Name=WP_003411924.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216829.1;locus_tag=AL55_RS17340;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003411924.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2583185 2584558 . - . ID=gene-AL55_RS17345;Name=AL55_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17345;old_locus_tag=AL55_02396 NZ_KK316828.1 Protein Homology CDS 2583185 2584558 . - 0 ID=cds-WP_003899270.1;Parent=gene-AL55_RS17345;Dbxref=GenBank:WP_003899270.1;Name=WP_003899270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216830.1;locus_tag=AL55_RS17345;product=TldD/PmbA family protein;protein_id=WP_003899270.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2584555 2586072 . - . ID=gene-AL55_RS17350;Name=AL55_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17350;old_locus_tag=AL55_02397 NZ_KK316828.1 Protein Homology CDS 2584555 2586072 . - 0 ID=cds-WP_003411929.1;Parent=gene-AL55_RS17350;Dbxref=GenBank:WP_003411929.1;Name=WP_003411929.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216831.1;locus_tag=AL55_RS17350;product=TldD/PmbA family protein;protein_id=WP_003411929.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2586106 2586978 . + . ID=gene-AL55_RS17355;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=AL55_RS17355;old_locus_tag=AL55_02398 NZ_KK316828.1 Protein Homology CDS 2586106 2586978 . + 0 ID=cds-WP_003905805.1;Parent=gene-AL55_RS17355;Dbxref=GenBank:WP_003905805.1;Name=WP_003905805.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=uspA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216832.1;locus_tag=AL55_RS17355;product=carbohydrate ABC transporter permease;protein_id=WP_003905805.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2586965 2587789 . + . ID=gene-AL55_RS17360;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=AL55_RS17360;old_locus_tag=AL55_02399 NZ_KK316828.1 Protein Homology CDS 2586965 2587789 . + 0 ID=cds-WP_003411946.1;Parent=gene-AL55_RS17360;Dbxref=GenBank:WP_003411946.1;Name=WP_003411946.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=uspB;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177866.1;locus_tag=AL55_RS17360;product=carbohydrate ABC transporter permease;protein_id=WP_003411946.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2587786 2589108 . + . ID=gene-AL55_RS17365;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=AL55_RS17365;old_locus_tag=AL55_02400 NZ_KK316828.1 Protein Homology CDS 2587786 2589108 . + 0 ID=cds-WP_003411947.1;Parent=gene-AL55_RS17365;Dbxref=GenBank:WP_003411947.1;Name=WP_003411947.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=uspC;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216834.1;locus_tag=AL55_RS17365;product=ABC transporter substrate-binding protein;protein_id=WP_003411947.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2589116 2589994 . - . ID=gene-AL55_RS17370;Name=AL55_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17370;old_locus_tag=AL55_02401 NZ_KK316828.1 Protein Homology CDS 2589116 2589994 . - 0 ID=cds-WP_003411952.1;Parent=gene-AL55_RS17370;Dbxref=GenBank:WP_003411952.1;Name=WP_003411952.1;Ontology_term=GO:0050896,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216835.1;locus_tag=AL55_RS17370;product=universal stress protein;protein_id=WP_003411952.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2589991 2591421 . - . ID=gene-AL55_RS17375;Name=rocE;gbkey=Gene;gene=rocE;gene_biotype=protein_coding;locus_tag=AL55_RS17375;old_locus_tag=AL55_02402 NZ_KK316828.1 Protein Homology CDS 2589991 2591421 . - 0 ID=cds-WP_003411955.1;Parent=gene-AL55_RS17375;Dbxref=GenBank:WP_003411955.1;Name=WP_003411955.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rocE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216836.1;locus_tag=AL55_RS17375;product=amino acid permease;protein_id=WP_003411955.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2591422 2592632 . - . ID=gene-AL55_RS28080;Name=AL55_RS28080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28080;pseudo=true NZ_KK316828.1 Protein Homology CDS 2591422 2592632 . - 0 ID=cds-AL55_RS28080;Parent=gene-AL55_RS28080;Note=frameshifted;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: protein motif:HMM:NF012428.6;locus_tag=AL55_RS28080;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2592629 2593477 . - . ID=gene-AL55_RS17390;Name=ddaH;gbkey=Gene;gene=ddaH;gene_biotype=protein_coding;locus_tag=AL55_RS17390;old_locus_tag=AL55_02405 NZ_KK316828.1 Protein Homology CDS 2592629 2593477 . - 0 ID=cds-WP_003914884.1;Parent=gene-AL55_RS17390;Dbxref=GenBank:WP_003914884.1;Name=WP_003914884.1;Ontology_term=GO:0016403;gbkey=CDS;gene=ddaH;go_function=dimethylargininase activity|0016403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872468.1;locus_tag=AL55_RS17390;product=dimethylargininase;protein_id=WP_003914884.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2593602 2594048 . + . ID=gene-AL55_RS17395;Name=AL55_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17395;old_locus_tag=AL55_02406 NZ_KK316828.1 Protein Homology CDS 2593602 2594048 . + 0 ID=cds-WP_003411963.1;Parent=gene-AL55_RS17395;Dbxref=GenBank:WP_003411963.1;Name=WP_003411963.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216840.1;locus_tag=AL55_RS17395;product=Rv2324 family transcriptional regulator;protein_id=WP_003411963.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2594277 2595125 . - . ID=gene-AL55_RS17400;Name=AL55_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17400;old_locus_tag=AL55_02407 NZ_KK316828.1 Protein Homology CDS 2594277 2595125 . - 0 ID=cds-WP_003411966.1;Parent=gene-AL55_RS17400;Dbxref=GenBank:WP_003411966.1;Name=WP_003411966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216841.1;locus_tag=AL55_RS17400;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_003411966.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2595122 2597170 . - . ID=gene-AL55_RS17405;Name=AL55_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17405;old_locus_tag=AL55_02408 NZ_KK316828.1 Protein Homology CDS 2595122 2597170 . - 0 ID=cds-WP_369810405.1;Parent=gene-AL55_RS17405;Dbxref=GenBank:WP_369810405.1;Name=WP_369810405.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014816547.1;locus_tag=AL55_RS17405;product=ABC transporter ATP-binding protein;protein_id=WP_369810405.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2597256 2597747 . + . ID=gene-AL55_RS17410;Name=AL55_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17410;old_locus_tag=AL55_02409 NZ_KK316828.1 Protein Homology CDS 2597256 2597747 . + 0 ID=cds-WP_003411970.1;Parent=gene-AL55_RS17410;Dbxref=GenBank:WP_003411970.1;Name=WP_003411970.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216843.1;locus_tag=AL55_RS17410;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003411970.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2597782 2597970 . + . ID=gene-AL55_RS28085;Name=AL55_RS28085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28085 NZ_KK316828.1 Protein Homology CDS 2597782 2597970 . + 0 ID=cds-WP_003411971.1;Parent=gene-AL55_RS28085;Dbxref=GenBank:WP_003411971.1;Name=WP_003411971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411971.1;locus_tag=AL55_RS28085;product=hypothetical protein;protein_id=WP_003411971.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2597999 2599147 . + . ID=gene-AL55_RS17415;Name=AL55_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17415;old_locus_tag=AL55_02410 NZ_KK316828.1 Protein Homology CDS 2597999 2599147 . + 0 ID=cds-WP_003902169.1;Parent=gene-AL55_RS17415;Dbxref=GenBank:WP_003902169.1;Name=WP_003902169.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177867.1;locus_tag=AL55_RS17415;product=PE family protein;protein_id=WP_003902169.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2599182 2600729 . - . ID=gene-AL55_RS17420;Name=AL55_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17420;old_locus_tag=AL55_02411 NZ_KK316828.1 Protein Homology CDS 2599182 2600729 . - 0 ID=cds-WP_003411973.1;Parent=gene-AL55_RS17420;Dbxref=GenBank:WP_003411973.1;Name=WP_003411973.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216845.1;locus_tag=AL55_RS17420;product=nitrate/nitrite transporter;protein_id=WP_003411973.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2600963 2601490 . - . ID=gene-AL55_RS17425;Name=lppP;gbkey=Gene;gene=lppP;gene_biotype=protein_coding;locus_tag=AL55_RS17425;old_locus_tag=AL55_02412 NZ_KK316828.1 Protein Homology CDS 2600963 2601490 . - 0 ID=cds-WP_003411974.1;Parent=gene-AL55_RS17425;Dbxref=GenBank:WP_003411974.1;Name=WP_003411974.1;gbkey=CDS;gene=lppP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216846.1;locus_tag=AL55_RS17425;product=LppP/LprE family lipoprotein;protein_id=WP_003411974.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2601565 2601951 . + . ID=gene-AL55_RS17430;Name=AL55_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17430;old_locus_tag=AL55_02413 NZ_KK316828.1 Protein Homology CDS 2601565 2601951 . + 0 ID=cds-WP_003411975.1;Parent=gene-AL55_RS17430;Dbxref=GenBank:WP_003411975.1;Name=WP_003411975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216847.1;locus_tag=AL55_RS17430;product=hypothetical protein;protein_id=WP_003411975.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2602218 2602346 . + . ID=gene-AL55_RS27935;Name=AL55_RS27935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27935 NZ_KK316828.1 GeneMarkS-2+ CDS 2602218 2602346 . + 0 ID=cds-WP_003916988.1;Parent=gene-AL55_RS27935;Dbxref=GenBank:WP_003916988.1;Name=WP_003916988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS27935;product=hypothetical protein;protein_id=WP_003916988.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2602376 2604022 . + . ID=gene-AL55_RS17440;Name=mez;gbkey=Gene;gene=mez;gene_biotype=protein_coding;locus_tag=AL55_RS17440;old_locus_tag=AL55_02415 NZ_KK316828.1 Protein Homology CDS 2602376 2604022 . + 0 ID=cds-WP_003899273.1;Parent=gene-AL55_RS17440;Dbxref=GenBank:WP_003899273.1;Name=WP_003899273.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;gene=mez;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216848.2;locus_tag=AL55_RS17440;product=NAD-dependent malic enzyme;protein_id=WP_003899273.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2603976 2605589 . - . ID=gene-AL55_RS17445;Name=stp;gbkey=Gene;gene=stp;gene_biotype=protein_coding;locus_tag=AL55_RS17445;old_locus_tag=AL55_02416 NZ_KK316828.1 Protein Homology CDS 2603976 2605589 . - 0 ID=cds-WP_003899274.1;Parent=gene-AL55_RS17445;Dbxref=GenBank:WP_003899274.1;Name=WP_003899274.1;gbkey=CDS;gene=stp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216849.1;locus_tag=AL55_RS17445;product=multidrug resistance protein Stp;protein_id=WP_003899274.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2605794 2605862 . + . ID=gene-AL55_RS28090;Name=AL55_RS28090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28090 NZ_KK316828.1 Protein Homology CDS 2605794 2605862 . + 0 ID=cds-WP_306921051.1;Parent=gene-AL55_RS28090;Dbxref=GenBank:WP_306921051.1;Name=WP_306921051.1;Note=Zero WPs at creation%2C it seemed. Model will need a rebuild once some become available. Manually created WP_306921051.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042939.1;locus_tag=AL55_RS28090;product=Rv2334A family Cys-rich leader peptide;protein_id=WP_306921051.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2606064 2606996 . + . ID=gene-AL55_RS17450;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=AL55_RS17450;old_locus_tag=AL55_02417 NZ_KK316828.1 Protein Homology CDS 2606064 2606996 . + 0 ID=cds-WP_003899275.1;Parent=gene-AL55_RS17450;Dbxref=GenBank:WP_003899275.1;Name=WP_003899275.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177868.1;locus_tag=AL55_RS17450;product=O-acetylserine sulfhydrylase;protein_id=WP_003899275.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2607000 2607689 . + . ID=gene-AL55_RS17455;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=AL55_RS17455;old_locus_tag=AL55_02418 NZ_KK316828.1 Protein Homology CDS 2607000 2607689 . + 0 ID=cds-WP_003411985.1;Parent=gene-AL55_RS17455;Dbxref=GenBank:WP_003411985.1;Name=WP_003411985.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216851.1;locus_tag=AL55_RS17455;product=serine O-acetyltransferase;protein_id=WP_003411985.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2608105 2609073 . + . ID=gene-AL55_RS17460;Name=AL55_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17460;old_locus_tag=AL55_02419 NZ_KK316828.1 Protein Homology CDS 2608105 2609073 . + 0 ID=cds-WP_003411992.1;Parent=gene-AL55_RS17460;Dbxref=GenBank:WP_003411992.1;Name=WP_003411992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216852.1;locus_tag=AL55_RS17460;product=hypothetical protein;protein_id=WP_003411992.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2609137 2610255 . - . ID=gene-AL55_RS17465;Name=AL55_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17465;old_locus_tag=AL55_02420 NZ_KK316828.1 Protein Homology CDS 2609137 2610255 . - 0 ID=cds-WP_003412001.1;Parent=gene-AL55_RS17465;Dbxref=GenBank:WP_003412001.1;Name=WP_003412001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216853.1;locus_tag=AL55_RS17465;product=nitroreductase family protein;protein_id=WP_003412001.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2610375 2611331 . - . ID=gene-AL55_RS17470;Name=moeW;gbkey=Gene;gene=moeW;gene_biotype=protein_coding;locus_tag=AL55_RS17470;old_locus_tag=AL55_02421 NZ_KK316828.1 Protein Homology CDS 2610375 2611331 . - 0 ID=cds-WP_003412005.1;Parent=gene-AL55_RS17470;Dbxref=GenBank:WP_003412005.1;Name=WP_003412005.1;gbkey=CDS;gene=moeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216854.1;locus_tag=AL55_RS17470;product=ThiF family adenylyltransferase;protein_id=WP_003412005.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2611961 2614848 . + . ID=gene-AL55_RS17475;Name=mmpL9;gbkey=Gene;gene=mmpL9;gene_biotype=pseudogene;locus_tag=AL55_RS17475;old_locus_tag=AL55_02422;pseudo=true NZ_KK316828.1 Protein Homology CDS 2611961 2614848 . + 0 ID=cds-AL55_RS17475;Parent=gene-AL55_RS17475;Note=frameshifted;gbkey=CDS;gene=mmpL9;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216855.1;locus_tag=AL55_RS17475;product=RND transporter MmpL9;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2614796 2614904 . + . ID=gene-AL55_RS26985;Name=AL55_RS26985;end_range=2614904,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS26985;partial=true;pseudo=true;start_range=.,2614796 NZ_KK316828.1 Protein Homology CDS 2614796 2614904 . + 0 ID=cds-AL55_RS26985;Parent=gene-AL55_RS26985;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2614904,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216851.1;locus_tag=AL55_RS26985;partial=true;product=serine O-acetyltransferase;pseudo=true;start_range=.,2614796;transl_table=11 NZ_KK316828.1 RefSeq gene 2614934 2616175 . - . ID=gene-AL55_RS17480;Name=AL55_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17480;old_locus_tag=AL55_02423 NZ_KK316828.1 Protein Homology CDS 2614934 2616175 . - 0 ID=cds-WP_003412039.1;Parent=gene-AL55_RS17480;Dbxref=GenBank:WP_003412039.1;Name=WP_003412039.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177869.1;locus_tag=AL55_RS17480;product=PE family protein;protein_id=WP_003412039.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2616674 2616746 . - . ID=gene-AL55_RS17485;Name=AL55_RS17485;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS17485;old_locus_tag=AL55_02424 NZ_KK316828.1 tRNAscan-SE tRNA 2616674 2616746 . - . ID=rna-AL55_RS17485;Parent=gene-AL55_RS17485;anticodon=(pos:complement(2616711..2616713));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS17485;product=tRNA-Asn NZ_KK316828.1 tRNAscan-SE exon 2616674 2616746 . - . ID=exon-AL55_RS17485-1;Parent=rna-AL55_RS17485;anticodon=(pos:complement(2616711..2616713));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS17485;product=tRNA-Asn NZ_KK316828.1 RefSeq gene 2616864 2617283 . + . ID=gene-AL55_RS17490;Name=AL55_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17490;old_locus_tag=AL55_02425 NZ_KK316828.1 Protein Homology CDS 2616864 2617283 . + 0 ID=cds-WP_003412042.1;Parent=gene-AL55_RS17490;Dbxref=GenBank:WP_003412042.1;Name=WP_003412042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216857.1;locus_tag=AL55_RS17490;product=hypothetical protein;protein_id=WP_003412042.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2617539 2617796 . + . ID=gene-AL55_RS17495;Name=AL55_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17495;old_locus_tag=AL55_02426 NZ_KK316828.1 Protein Homology CDS 2617539 2617796 . + 0 ID=cds-WP_003412045.1;Parent=gene-AL55_RS17495;Dbxref=GenBank:WP_003412045.1;Name=WP_003412045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216858.1;locus_tag=AL55_RS17495;product=hypothetical protein;protein_id=WP_003412045.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2617800 2619719 . - . ID=gene-AL55_RS17500;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AL55_RS17500;old_locus_tag=AL55_02427 NZ_KK316828.1 Protein Homology CDS 2617800 2619719 . - 0 ID=cds-WP_003412049.1;Parent=gene-AL55_RS17500;Dbxref=GenBank:WP_003412049.1;Name=WP_003412049.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216859.1;locus_tag=AL55_RS17500;product=DNA primase;protein_id=WP_003412049.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2619724 2621019 . - . ID=gene-AL55_RS17505;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AL55_RS17505;old_locus_tag=AL55_02428 NZ_KK316828.1 Protein Homology CDS 2619724 2621019 . - 0 ID=cds-WP_003899281.1;Parent=gene-AL55_RS17505;Dbxref=GenBank:WP_003899281.1;Name=WP_003899281.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832,GO:0016793;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA,triphosphoric monoester hydrolase activity|0016793||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216860.1;locus_tag=AL55_RS17505;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_003899281.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2621088 2623070 . + . ID=gene-AL55_RS17510;Name=AL55_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17510;old_locus_tag=AL55_02429 NZ_KK316828.1 Protein Homology CDS 2621088 2623070 . + 0 ID=cds-WP_003899282.1;Parent=gene-AL55_RS17510;Dbxref=GenBank:WP_003899282.1;Name=WP_003899282.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216861.1;locus_tag=AL55_RS17510;product=TPM domain-containing protein;protein_id=WP_003899282.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2623155 2623439 . - . ID=gene-AL55_RS17515;Name=esxO;gbkey=Gene;gene=esxO;gene_biotype=protein_coding;locus_tag=AL55_RS17515;old_locus_tag=AL55_02430 NZ_KK316828.1 Protein Homology CDS 2623155 2623439 . - 0 ID=cds-WP_003905811.1;Parent=gene-AL55_RS17515;Dbxref=GenBank:WP_003905811.1;Name=WP_003905811.1;gbkey=CDS;gene=esxO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216862.1;locus_tag=AL55_RS17515;product=type VII secretion system effector EsxO;protein_id=WP_003905811.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2623490 2623786 . - . ID=gene-AL55_RS17520;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=protein_coding;locus_tag=AL55_RS17520;old_locus_tag=AL55_02431 NZ_KK316828.1 Protein Homology CDS 2623490 2623786 . - 0 ID=cds-WP_003421604.1-2;Parent=gene-AL55_RS17520;Dbxref=GenBank:WP_003421604.1;Name=WP_003421604.1;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215713.1;locus_tag=AL55_RS17520;product=type VII secretion system ESX-5 protein EsxJ;protein_id=WP_003421604.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2623921 2624247 . - . ID=gene-AL55_RS0105100;Name=AL55_RS0105100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105100;old_locus_tag=AL55_02432 NZ_KK316828.1 Protein Homology CDS 2623921 2624247 . - 0 ID=cds-WP_003412119.1;Parent=gene-AL55_RS0105100;Dbxref=GenBank:WP_003412119.1;Name=WP_003412119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216864.1;locus_tag=AL55_RS0105100;product=hypothetical protein;protein_id=WP_003412119.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2624439 2625965 . - . ID=gene-AL55_RS17525;Name=plcC;gbkey=Gene;gene=plcC;gene_biotype=protein_coding;locus_tag=AL55_RS17525;old_locus_tag=AL55_02433 NZ_KK316828.1 Protein Homology CDS 2624439 2625965 . - 0 ID=cds-WP_003905812.1;Parent=gene-AL55_RS17525;Dbxref=GenBank:WP_003905812.1;Name=WP_003905812.1;gbkey=CDS;gene=plcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216865.1;locus_tag=AL55_RS17525;product=phospholipase C;protein_id=WP_003905812.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2626048 2627586 . - . ID=gene-AL55_RS17530;Name=plcB;gbkey=Gene;gene=plcB;gene_biotype=protein_coding;locus_tag=AL55_RS17530;old_locus_tag=AL55_02434 NZ_KK316828.1 Protein Homology CDS 2626048 2627586 . - 0 ID=cds-WP_003899285.1;Parent=gene-AL55_RS17530;Dbxref=GenBank:WP_003899285.1;Name=WP_003899285.1;gbkey=CDS;gene=plcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216865.1;locus_tag=AL55_RS17530;product=phospholipase C;protein_id=WP_003899285.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2627804 2629342 . - . ID=gene-AL55_RS17535;Name=plcA;gbkey=Gene;gene=plcA;gene_biotype=protein_coding;locus_tag=AL55_RS17535;old_locus_tag=AL55_02435 NZ_KK316828.1 Protein Homology CDS 2627804 2629342 . - 0 ID=cds-WP_003905813.1;Parent=gene-AL55_RS17535;Dbxref=GenBank:WP_003905813.1;Name=WP_003905813.1;gbkey=CDS;gene=plcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911847.1;locus_tag=AL55_RS17535;product=phospholipase C;protein_id=WP_003905813.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2629923 2630060 . + . ID=gene-AL55_RS27345;Name=AL55_RS27345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27345 NZ_KK316828.1 GeneMarkS-2+ CDS 2629923 2630060 . + 0 ID=cds-WP_021083104.1;Parent=gene-AL55_RS27345;Dbxref=GenBank:WP_021083104.1;Name=WP_021083104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS27345;product=hypothetical protein;protein_id=WP_021083104.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2630191 2631363 . - . ID=gene-AL55_RS17540;Name=AL55_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17540;old_locus_tag=AL55_02436 NZ_KK316828.1 Protein Homology CDS 2630191 2631363 . - 0 ID=cds-WP_049952259.1;Parent=gene-AL55_RS17540;Dbxref=GenBank:WP_049952259.1;Name=WP_049952259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899929.1;locus_tag=AL55_RS17540;product=PPE family protein;protein_id=WP_049952259.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2631370 2632631 . + . ID=gene-AL55_RS17550;Name=AL55_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17550;old_locus_tag=AL55_02438 NZ_KK316828.1 Protein Homology CDS 2631370 2631658 . + 0 ID=cds-WP_087902221.1-9;Parent=gene-AL55_RS17550;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS17550;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 2631658 2632631 . + 2 ID=cds-WP_087902221.1-9;Parent=gene-AL55_RS17550;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS17550;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2632676 2632750 . - . ID=gene-AL55_RS28245;Name=AL55_RS28245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28245;partial=true;pseudo=true;start_range=.,2632676 NZ_KK316828.1 Protein Homology CDS 2632676 2632750 . - 0 ID=cds-AL55_RS28245;Parent=gene-AL55_RS28245;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177870.1;locus_tag=AL55_RS28245;partial=true;product=PPE domain-containing protein;pseudo=true;start_range=.,2632676;transl_table=11 NZ_KK316828.1 RefSeq gene 2633180 2635048 . - . ID=gene-AL55_RS17555;Name=AL55_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17555;old_locus_tag=AL55_02439 NZ_KK316828.1 Protein Homology CDS 2633180 2635048 . - 0 ID=cds-WP_031695419.1;Parent=gene-AL55_RS17555;Dbxref=GenBank:WP_031695419.1;Name=WP_031695419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015290607.1;locus_tag=AL55_RS17555;product=PPE family protein;protein_id=WP_031695419.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2635786 2637633 . - . ID=gene-AL55_RS17560;Name=AL55_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17560;old_locus_tag=AL55_02440 NZ_KK316828.1 Protein Homology CDS 2635786 2637633 . - 0 ID=cds-WP_003904827.1;Parent=gene-AL55_RS17560;Dbxref=GenBank:WP_003904827.1;Name=WP_003904827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939045.1;locus_tag=AL55_RS17560;product=PPE family protein;protein_id=WP_003904827.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2637771 2639162 . - . ID=gene-AL55_RS17565;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AL55_RS17565;old_locus_tag=AL55_02441 NZ_KK316828.1 Protein Homology CDS 2637771 2639162 . - 0 ID=cds-WP_003412200.1;Parent=gene-AL55_RS17565;Dbxref=GenBank:WP_003412200.1;Name=WP_003412200.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;gene=glyS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216873.1;locus_tag=AL55_RS17565;product=glycine--tRNA ligase;protein_id=WP_003412200.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2639344 2639751 . + . ID=gene-AL55_RS17570;Name=smtB;gbkey=Gene;gene=smtB;gene_biotype=protein_coding;locus_tag=AL55_RS17570;old_locus_tag=AL55_02442 NZ_KK316828.1 Protein Homology CDS 2639344 2639751 . + 0 ID=cds-WP_003412205.1;Parent=gene-AL55_RS17570;Dbxref=GenBank:WP_003412205.1;Name=WP_003412205.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=smtB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216874.1;locus_tag=AL55_RS17570;product=ArsR/SmtB family transcription factor;protein_id=WP_003412205.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2639748 2640140 . + . ID=gene-AL55_RS17575;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=AL55_RS17575;old_locus_tag=AL55_02443 NZ_KK316828.1 Protein Homology CDS 2639748 2640140 . + 0 ID=cds-WP_003899290.1;Parent=gene-AL55_RS17575;Dbxref=GenBank:WP_003899290.1;Name=WP_003899290.1;gbkey=CDS;gene=zur;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216875.1;locus_tag=AL55_RS17575;product=Fur family transcriptional regulator;protein_id=WP_003899290.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2640248 2640676 . - . ID=gene-AL55_RS17580;Name=AL55_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17580;old_locus_tag=AL55_02444 NZ_KK316828.1 Protein Homology CDS 2640248 2640676 . - 0 ID=cds-WP_003412208.1;Parent=gene-AL55_RS17580;Dbxref=GenBank:WP_003412208.1;Name=WP_003412208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216876.1;locus_tag=AL55_RS17580;product=hypothetical protein;protein_id=WP_003412208.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2640676 2641566 . - . ID=gene-AL55_RS17585;Name=AL55_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17585;old_locus_tag=AL55_02445 NZ_KK316828.1 Protein Homology CDS 2640676 2641566 . - 0 ID=cds-WP_003412212.1;Parent=gene-AL55_RS17585;Dbxref=GenBank:WP_003412212.1;Name=WP_003412212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216877.1;locus_tag=AL55_RS17585;product=decaprenyl diphosphate synthase;protein_id=WP_003412212.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2641559 2642356 . - . ID=gene-AL55_RS17590;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AL55_RS17590;old_locus_tag=AL55_02446 NZ_KK316828.1 Protein Homology CDS 2641559 2642356 . - 0 ID=cds-WP_003412222.1;Parent=gene-AL55_RS17590;Dbxref=GenBank:WP_003412222.1;Name=WP_003412222.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216878.1;locus_tag=AL55_RS17590;product=DNA repair protein RecO;protein_id=WP_003412222.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2642418 2643872 . + . ID=gene-AL55_RS17595;Name=AL55_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17595;old_locus_tag=AL55_02447 NZ_KK316828.1 Protein Homology CDS 2642418 2643872 . + 0 ID=cds-WP_003412223.1;Parent=gene-AL55_RS17595;Dbxref=GenBank:WP_003412223.1;Name=WP_003412223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216879.1;locus_tag=AL55_RS17595;product=amidase;protein_id=WP_003412223.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2643869 2644771 . - . ID=gene-AL55_RS17600;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AL55_RS17600;old_locus_tag=AL55_02448 NZ_KK316828.1 Protein Homology CDS 2643869 2644771 . - 0 ID=cds-WP_003412224.1;Parent=gene-AL55_RS17600;Dbxref=GenBank:WP_003412224.1;Name=WP_003412224.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177873.1;locus_tag=AL55_RS17600;product=GTPase Era;protein_id=WP_003412224.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2644845 2645186 . - . ID=gene-AL55_RS17605;Name=AL55_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17605;old_locus_tag=AL55_02449 NZ_KK316828.1 Protein Homology CDS 2644845 2645186 . - 0 ID=cds-WP_003412226.1;Parent=gene-AL55_RS17605;Dbxref=GenBank:WP_003412226.1;Name=WP_003412226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216881.1;locus_tag=AL55_RS17605;product=hypothetical protein;protein_id=WP_003412226.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2645158 2646465 . - . ID=gene-AL55_RS17610;Name=AL55_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17610;old_locus_tag=AL55_02450 NZ_KK316828.1 Protein Homology CDS 2645158 2646465 . - 0 ID=cds-WP_003905819.1;Parent=gene-AL55_RS17610;Dbxref=GenBank:WP_003905819.1;Name=WP_003905819.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216882.1;locus_tag=AL55_RS17610;product=hemolysin family protein;protein_id=WP_003905819.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2646462 2646995 . - . ID=gene-AL55_RS17615;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=AL55_RS17615;old_locus_tag=AL55_02451 NZ_KK316828.1 Protein Homology CDS 2646462 2646995 . - 0 ID=cds-WP_003899292.1;Parent=gene-AL55_RS17615;Dbxref=GenBank:WP_003899292.1;Name=WP_003899292.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003412232.1;locus_tag=AL55_RS17615;product=rRNA maturation RNase YbeY;protein_id=WP_003899292.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2647014 2648072 . - . ID=gene-AL55_RS17620;Name=AL55_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17620;old_locus_tag=AL55_02452 NZ_KK316828.1 Protein Homology CDS 2647014 2648072 . - 0 ID=cds-WP_003412235.1;Parent=gene-AL55_RS17620;Dbxref=GenBank:WP_003412235.1;Name=WP_003412235.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177874.1;locus_tag=AL55_RS17620;product=PhoH family protein;protein_id=WP_003412235.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2648044 2648346 . - . ID=gene-AL55_RS26215;Name=AL55_RS26215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26215;old_locus_tag=AL55_02453 NZ_KK316828.1 Protein Homology CDS 2648044 2648346 . - 0 ID=cds-WP_003902257.1;Parent=gene-AL55_RS26215;Dbxref=GenBank:WP_003902257.1;Name=WP_003902257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216885.1;locus_tag=AL55_RS26215;product=hypothetical protein;protein_id=WP_003902257.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2648343 2649656 . - . ID=gene-AL55_RS17625;Name=AL55_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17625;old_locus_tag=AL55_02454 NZ_KK316828.1 Protein Homology CDS 2648343 2649656 . - 0 ID=cds-WP_003899293.1;Parent=gene-AL55_RS17625;Dbxref=GenBank:WP_003899293.1;Name=WP_003899293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216886.1;locus_tag=AL55_RS17625;product=Rv1453 family transcriptional regulator;protein_id=WP_003899293.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2649851 2650033 . + . ID=gene-AL55_RS27740;Name=AL55_RS27740;end_range=2650033,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27740;old_locus_tag=AL55_02455;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 2649851 2650033 . + 0 ID=cds-AL55_RS27740;Parent=gene-AL55_RS27740;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;end_range=2650033,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177812.1;locus_tag=AL55_RS27740;partial=true;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2650135 2650923 . - . ID=gene-AL55_RS17635;Name=AL55_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17635;old_locus_tag=AL55_02456 NZ_KK316828.1 Protein Homology CDS 2650135 2650923 . - 0 ID=cds-WP_003900509.1;Parent=gene-AL55_RS17635;Dbxref=GenBank:WP_003900509.1;Name=WP_003900509.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216888.1;locus_tag=AL55_RS17635;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_003900509.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2650937 2652085 . - . ID=gene-AL55_RS17640;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AL55_RS17640;old_locus_tag=AL55_02457 NZ_KK316828.1 Protein Homology CDS 2650937 2652085 . - 0 ID=cds-WP_003899294.1;Parent=gene-AL55_RS17640;Dbxref=GenBank:WP_003899294.1;Name=WP_003899294.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216889.1;locus_tag=AL55_RS17640;product=molecular chaperone DnaJ;protein_id=WP_003899294.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2652160 2653191 . - . ID=gene-AL55_RS17645;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=AL55_RS17645;old_locus_tag=AL55_02458 NZ_KK316828.1 Protein Homology CDS 2652160 2653191 . - 0 ID=cds-WP_003412252.1;Parent=gene-AL55_RS17645;Dbxref=GenBank:WP_003412252.1;Name=WP_003412252.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216890.1;locus_tag=AL55_RS17645;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_003412252.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2653363 2653680 . + . ID=gene-AL55_RS17650;Name=AL55_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17650;old_locus_tag=AL55_02459 NZ_KK316828.1 Protein Homology CDS 2653363 2653680 . + 0 ID=cds-WP_003412258.1;Parent=gene-AL55_RS17650;Dbxref=GenBank:WP_003412258.1;Name=WP_003412258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216891.1;locus_tag=AL55_RS17650;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003412258.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2653707 2654213 . - . ID=gene-AL55_RS17655;Name=AL55_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17655;old_locus_tag=AL55_02460 NZ_KK316828.1 Protein Homology CDS 2653707 2654213 . - 0 ID=cds-WP_003412264.1;Parent=gene-AL55_RS17655;Dbxref=GenBank:WP_003412264.1;Name=WP_003412264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216892.1;locus_tag=AL55_RS17655;product=MTB12 family secreted protein;protein_id=WP_003412264.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2654313 2654528 . - . ID=gene-AL55_RS17660;Name=mbtH;gbkey=Gene;gene=mbtH;gene_biotype=protein_coding;locus_tag=AL55_RS17660;old_locus_tag=AL55_02461 NZ_KK316828.1 Protein Homology CDS 2654313 2654528 . - 0 ID=cds-WP_003412265.1;Parent=gene-AL55_RS17660;Dbxref=GenBank:WP_003412265.1;Name=WP_003412265.1;gbkey=CDS;gene=mbtH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216893.1;locus_tag=AL55_RS17660;product=mycobactin NRPS accessory protein MbtH;protein_id=WP_003412265.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2654506 2655801 . - . ID=gene-AL55_RS17665;Name=mbtG;gbkey=Gene;gene=mbtG;gene_biotype=protein_coding;locus_tag=AL55_RS17665;old_locus_tag=AL55_02462 NZ_KK316828.1 Protein Homology CDS 2654506 2655801 . - 0 ID=cds-WP_003899296.1;Parent=gene-AL55_RS17665;Dbxref=GenBank:WP_003899296.1;Name=WP_003899296.1;gbkey=CDS;gene=mbtG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216894.1;locus_tag=AL55_RS17665;product=NADPH-dependent L-lysine N(6)-monooxygenase MbtG;protein_id=WP_003899296.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2655798 2660168 . - . ID=gene-AL55_RS17670;Name=mbtF;gbkey=Gene;gene=mbtF;gene_biotype=protein_coding;locus_tag=AL55_RS17670;old_locus_tag=AL55_02463 NZ_KK316828.1 Protein Homology CDS 2655798 2660168 . - 0 ID=cds-WP_003917623.1;Parent=gene-AL55_RS17670;Dbxref=GenBank:WP_003917623.1;Name=WP_003917623.1;Ontology_term=GO:1904091;gbkey=CDS;gene=mbtF;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917623.1;locus_tag=AL55_RS17670;product=mycobactin non-ribosomal peptide synthetase MbtF;protein_id=WP_003917623.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2660165 2665360 . - . ID=gene-AL55_RS17675;Name=mbtE;gbkey=Gene;gene=mbtE;gene_biotype=protein_coding;locus_tag=AL55_RS17675;old_locus_tag=AL55_02464 NZ_KK316828.1 Protein Homology CDS 2660165 2665360 . - 0 ID=cds-WP_003899297.1;Parent=gene-AL55_RS17675;Dbxref=GenBank:WP_003899297.1;Name=WP_003899297.1;Ontology_term=GO:1904091;gbkey=CDS;gene=mbtE;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899297.1;locus_tag=AL55_RS17675;product=mycobactin non-ribosomal peptide synthetase MbtE;protein_id=WP_003899297.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2665353 2668367 . - . ID=gene-AL55_RS17680;Name=mbtD;gbkey=Gene;gene=mbtD;gene_biotype=protein_coding;locus_tag=AL55_RS17680;old_locus_tag=AL55_02465 NZ_KK316828.1 Protein Homology CDS 2665353 2668367 . - 0 ID=cds-WP_003412277.1;Parent=gene-AL55_RS17680;Dbxref=GenBank:WP_003412277.1;Name=WP_003412277.1;gbkey=CDS;gene=mbtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216897.1;locus_tag=AL55_RS17680;product=mycobactin polyketide synthase MbtD;protein_id=WP_003412277.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2668367 2669701 . - . ID=gene-AL55_RS17685;Name=mbtC;gbkey=Gene;gene=mbtC;gene_biotype=protein_coding;locus_tag=AL55_RS17685;old_locus_tag=AL55_02466 NZ_KK316828.1 Protein Homology CDS 2668367 2669701 . - 0 ID=cds-WP_003412278.1;Parent=gene-AL55_RS17685;Dbxref=GenBank:WP_003412278.1;Name=WP_003412278.1;gbkey=CDS;gene=mbtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216898.1;locus_tag=AL55_RS17685;product=polyketide synthetase MbtC;protein_id=WP_003412278.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2669691 2673935 . - . ID=gene-AL55_RS17690;Name=mbtB;gbkey=Gene;gene=mbtB;gene_biotype=protein_coding;locus_tag=AL55_RS17690;old_locus_tag=AL55_02467 NZ_KK316828.1 Protein Homology CDS 2669691 2673935 . - 0 ID=cds-WP_003902259.1;Parent=gene-AL55_RS17690;Dbxref=GenBank:WP_003902259.1;Name=WP_003902259.1;gbkey=CDS;gene=mbtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216899.1;locus_tag=AL55_RS17690;product=phenyloxazoline synthase MbtB;protein_id=WP_003902259.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2674034 2675731 . + . ID=gene-AL55_RS17695;Name=mbtA;gbkey=Gene;gene=mbtA;gene_biotype=protein_coding;locus_tag=AL55_RS17695;old_locus_tag=AL55_02468 NZ_KK316828.1 Protein Homology CDS 2674034 2675731 . + 0 ID=cds-WP_003412282.1;Parent=gene-AL55_RS17695;Dbxref=GenBank:WP_003412282.1;Name=WP_003412282.1;gbkey=CDS;gene=mbtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216900.1;locus_tag=AL55_RS17695;product=bifunctional salicyl-AMP ligase/salicyl-S-ArCP synthetase MbtA;protein_id=WP_003412282.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2675764 2676747 . + . ID=gene-AL55_RS17700;Name=mbtJ;gbkey=Gene;gene=mbtJ;gene_biotype=protein_coding;gene_synonym=lipK;locus_tag=AL55_RS17700;old_locus_tag=AL55_02469 NZ_KK316828.1 Protein Homology CDS 2675764 2676747 . + 0 ID=cds-WP_003899300.1;Parent=gene-AL55_RS17700;Dbxref=GenBank:WP_003899300.1;Name=WP_003899300.1;gbkey=CDS;gene=mbtJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899300.1;locus_tag=AL55_RS17700;product=acetyl hydrolase/esterase MbtJ;protein_id=WP_003899300.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2676751 2678103 . - . ID=gene-AL55_RS17705;Name=mbtI;gbkey=Gene;gene=mbtI;gene_biotype=protein_coding;locus_tag=AL55_RS17705;old_locus_tag=AL55_02470 NZ_KK316828.1 Protein Homology CDS 2676751 2678103 . - 0 ID=cds-WP_003412287.1;Parent=gene-AL55_RS17705;Dbxref=GenBank:WP_003412287.1;Name=WP_003412287.1;gbkey=CDS;gene=mbtI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177877.1;locus_tag=AL55_RS17705;product=mycobactin biosynthesis salicylate synthase MbtI;protein_id=WP_003412287.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2678556 2678765 . + . ID=gene-AL55_RS17710;Name=AL55_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17710;old_locus_tag=AL55_02471 NZ_KK316828.1 Protein Homology CDS 2678556 2678765 . + 0 ID=cds-WP_003899302.1;Parent=gene-AL55_RS17710;Dbxref=GenBank:WP_003899302.1;Name=WP_003899302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030039.1;locus_tag=AL55_RS17710;product=hypothetical protein;protein_id=WP_003899302.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2678863 2680116 . + . ID=gene-AL55_RS17715;Name=AL55_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17715;old_locus_tag=AL55_02472 NZ_KK316828.1 Protein Homology CDS 2678863 2680116 . + 0 ID=cds-WP_003412289.1;Parent=gene-AL55_RS17715;Dbxref=GenBank:WP_003412289.1;Name=WP_003412289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216903.1;locus_tag=AL55_RS17715;product=sodium-dependent bicarbonate transport family permease;protein_id=WP_003412289.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2680113 2681285 . - . ID=gene-AL55_RS17720;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=AL55_RS17720;old_locus_tag=AL55_02473 NZ_KK316828.1 Protein Homology CDS 2680113 2681285 . - 0 ID=cds-WP_003412290.1;Parent=gene-AL55_RS17720;Dbxref=GenBank:WP_003412290.1;Name=WP_003412290.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631433.1;locus_tag=AL55_RS17720;product=radical SAM family heme chaperone HemW;protein_id=WP_003412290.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2681346 2681810 . - . ID=gene-AL55_RS17725;Name=rpfD;gbkey=Gene;gene=rpfD;gene_biotype=protein_coding;locus_tag=AL55_RS17725;old_locus_tag=AL55_02474 NZ_KK316828.1 Protein Homology CDS 2681346 2681810 . - 0 ID=cds-WP_003412293.1;Parent=gene-AL55_RS17725;Dbxref=GenBank:WP_003412293.1;Name=WP_003412293.1;gbkey=CDS;gene=rpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216905.1;locus_tag=AL55_RS17725;product=resuscitation-promoting factor protein RpfD;protein_id=WP_003412293.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2681807 2682364 . - . ID=gene-AL55_RS17730;Name=AL55_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17730;old_locus_tag=AL55_02475 NZ_KK316828.1 Protein Homology CDS 2681807 2682364 . - 0 ID=cds-WP_003412295.1;Parent=gene-AL55_RS17730;Dbxref=GenBank:WP_003412295.1;Name=WP_003412295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216906.1;locus_tag=AL55_RS17730;product=hypothetical protein;protein_id=WP_003412295.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2682630 2682686 . + . ID=gene-AL55_RS28095;Name=AL55_RS28095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28095 NZ_KK316828.1 Protein Homology CDS 2682630 2682686 . + 0 ID=cds-WP_349814673.1;Parent=gene-AL55_RS28095;Dbxref=GenBank:WP_349814673.1;Name=WP_349814673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042936.1;locus_tag=AL55_RS28095;product=Ms4527A family Cys-rich leader peptide;protein_id=WP_349814673.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2682801 2684468 . + . ID=gene-AL55_RS17735;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=protein_coding;locus_tag=AL55_RS17735;old_locus_tag=AL55_02476 NZ_KK316828.1 Protein Homology CDS 2682801 2684468 . + 0 ID=cds-WP_003899303.1;Parent=gene-AL55_RS17735;Dbxref=GenBank:WP_003899303.1;Name=WP_003899303.1;gbkey=CDS;gene=sirA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899303.1;locus_tag=AL55_RS17735;product=sulfite reductase SirA;protein_id=WP_003899303.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2684465 2685229 . + . ID=gene-AL55_RS17740;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=AL55_RS17740;old_locus_tag=AL55_02477 NZ_KK316828.1 Protein Homology CDS 2684465 2685229 . + 0 ID=cds-WP_003412303.1;Parent=gene-AL55_RS17740;Dbxref=GenBank:WP_003412303.1;Name=WP_003412303.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;gene=cysH;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216908.1;locus_tag=AL55_RS17740;product=phosphoadenylyl-sulfate reductase;protein_id=WP_003412303.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2685226 2686071 . + . ID=gene-AL55_RS17745;Name=AL55_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17745;old_locus_tag=AL55_02478 NZ_KK316828.1 Protein Homology CDS 2685226 2686071 . + 0 ID=cds-WP_003412306.1;Parent=gene-AL55_RS17745;Dbxref=GenBank:WP_003412306.1;Name=WP_003412306.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=AL55_RS17745;product=sirohydrochlorin chelatase;protein_id=WP_003412306.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2686108 2688039 . + . ID=gene-AL55_RS17750;Name=ggtB;gbkey=Gene;gene=ggtB;gene_biotype=protein_coding;locus_tag=AL55_RS17750;old_locus_tag=AL55_02479 NZ_KK316828.1 Protein Homology CDS 2686108 2688039 . + 0 ID=cds-WP_003899304.1;Parent=gene-AL55_RS17750;Dbxref=GenBank:WP_003899304.1;Name=WP_003899304.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ggtB;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216910.1;locus_tag=AL55_RS17750;product=gamma-glutamyltransferase family protein;protein_id=WP_003899304.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2688170 2690173 . + . ID=gene-AL55_RS17755;Name=AL55_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17755;old_locus_tag=AL55_02480 NZ_KK316828.1 Protein Homology CDS 2688170 2690173 . + 0 ID=cds-WP_003899305.1;Parent=gene-AL55_RS17755;Dbxref=GenBank:WP_003899305.1;Name=WP_003899305.1;Ontology_term=GO:0006857,GO:0035673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=oligopeptide transport|0006857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216911.1;locus_tag=AL55_RS17755;product=OPT family oligopeptide transporter;protein_id=WP_003899305.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2690322 2690537 . + . ID=gene-AL55_RS17760;Name=aprA;gbkey=Gene;gene=aprA;gene_biotype=protein_coding;locus_tag=AL55_RS17760;old_locus_tag=AL55_02481 NZ_KK316828.1 Protein Homology CDS 2690322 2690537 . + 0 ID=cds-WP_003899306.1;Parent=gene-AL55_RS17760;Dbxref=GenBank:WP_003899306.1;Name=WP_003899306.1;gbkey=CDS;gene=aprA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411091.1;locus_tag=AL55_RS17760;product=acid and phagosome regulated protein AprA;protein_id=WP_003899306.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2690649 2690813 . + . ID=gene-AL55_RS17765;Name=aprB;gbkey=Gene;gene=aprB;gene_biotype=protein_coding;locus_tag=AL55_RS17765;old_locus_tag=AL55_02482 NZ_KK316828.1 Protein Homology CDS 2690649 2690813 . + 0 ID=cds-WP_003907942.1;Parent=gene-AL55_RS17765;Dbxref=GenBank:WP_003907942.1;Name=WP_003907942.1;gbkey=CDS;gene=aprB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411092.1;locus_tag=AL55_RS17765;product=acid and phagosome regulated protein AprB;protein_id=WP_003907942.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2690897 2691973 . + . ID=gene-AL55_RS17770;Name=AL55_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17770;old_locus_tag=AL55_02483 NZ_KK316828.1 Protein Homology CDS 2690897 2691973 . + 0 ID=cds-WP_031668789.1;Parent=gene-AL55_RS17770;Dbxref=GenBank:WP_031668789.1;Name=WP_031668789.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177878.1;locus_tag=AL55_RS17770;product=PE family protein;protein_id=WP_031668789.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2691998 2693053 . - . ID=gene-AL55_RS17775;Name=AL55_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17775;old_locus_tag=AL55_02484 NZ_KK316828.1 Protein Homology CDS 2691998 2693053 . - 0 ID=cds-WP_003412325.1;Parent=gene-AL55_RS17775;Dbxref=GenBank:WP_003412325.1;Name=WP_003412325.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177879.1;locus_tag=AL55_RS17775;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_003412325.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2693070 2693888 . - . ID=gene-AL55_RS17780;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=AL55_RS17780;old_locus_tag=AL55_02485 NZ_KK316828.1 Protein Homology CDS 2693070 2693888 . - 0 ID=cds-WP_003412329.1;Parent=gene-AL55_RS17780;Dbxref=GenBank:WP_003412329.1;Name=WP_003412329.1;Ontology_term=GO:1902358,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysW;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216914.1;locus_tag=AL55_RS17780;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_003412329.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2693885 2694736 . - . ID=gene-AL55_RS17785;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=AL55_RS17785;old_locus_tag=AL55_02486 NZ_KK316828.1 Protein Homology CDS 2693885 2694736 . - 0 ID=cds-WP_003412332.1;Parent=gene-AL55_RS17785;Dbxref=GenBank:WP_003412332.1;Name=WP_003412332.1;Ontology_term=GO:1902358,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysT;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216915.1;locus_tag=AL55_RS17785;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_003412332.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2694733 2695803 . - . ID=gene-AL55_RS17790;Name=subI;gbkey=Gene;gene=subI;gene_biotype=protein_coding;locus_tag=AL55_RS17790;old_locus_tag=AL55_02487 NZ_KK316828.1 Protein Homology CDS 2694733 2695803 . - 0 ID=cds-WP_003901397.1;Parent=gene-AL55_RS17790;Dbxref=GenBank:WP_003901397.1;Name=WP_003901397.1;gbkey=CDS;gene=subI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216916.1;locus_tag=AL55_RS17790;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_003901397.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2695817 2696146 . + . ID=gene-AL55_RS17795;Name=AL55_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17795;old_locus_tag=AL55_02488 NZ_KK316828.1 Protein Homology CDS 2695817 2696146 . + 0 ID=cds-WP_003900513.1;Parent=gene-AL55_RS17795;Dbxref=GenBank:WP_003900513.1;Name=WP_003900513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216917.2;locus_tag=AL55_RS17795;product=hypothetical protein;protein_id=WP_003900513.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2696131 2696334 . - . ID=gene-AL55_RS17800;Name=AL55_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17800;old_locus_tag=AL55_02489 NZ_KK316828.1 Protein Homology CDS 2696131 2696334 . - 0 ID=cds-WP_003412337.1;Parent=gene-AL55_RS17800;Dbxref=GenBank:WP_003412337.1;Name=WP_003412337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177670.1;locus_tag=AL55_RS17800;product=hypothetical protein;protein_id=WP_003412337.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2696504 2698546 . + . ID=gene-AL55_RS17805;Name=AL55_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17805;old_locus_tag=AL55_02490 NZ_KK316828.1 Protein Homology CDS 2696504 2698546 . + 0 ID=cds-WP_003913344.1;Parent=gene-AL55_RS17805;Dbxref=GenBank:WP_003913344.1;Name=WP_003913344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875915.1;locus_tag=AL55_RS17805;product=glycoside hydrolase family 15 protein;protein_id=WP_003913344.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2698624 2699379 . - . ID=gene-AL55_RS17810;Name=lppR;gbkey=Gene;gene=lppR;gene_biotype=protein_coding;locus_tag=AL55_RS17810;old_locus_tag=AL55_02491 NZ_KK316828.1 Protein Homology CDS 2698624 2699379 . - 0 ID=cds-WP_003412341.1;Parent=gene-AL55_RS17810;Dbxref=GenBank:WP_003412341.1;Name=WP_003412341.1;gbkey=CDS;gene=lppR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216919.1;locus_tag=AL55_RS17810;product=sensor domain-containing protein;protein_id=WP_003412341.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2699376 2701337 . - . ID=gene-AL55_RS17815;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AL55_RS17815;old_locus_tag=AL55_02492 NZ_KK316828.1 Protein Homology CDS 2699376 2701337 . - 0 ID=cds-WP_003900516.1;Parent=gene-AL55_RS17815;Dbxref=GenBank:WP_003900516.1;Name=WP_003900516.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216920.1;locus_tag=AL55_RS17815;product=translation elongation factor 4;protein_id=WP_003900516.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2701325 2701927 . + . ID=gene-AL55_RS17820;Name=AL55_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17820;old_locus_tag=AL55_02493 NZ_KK316828.1 Protein Homology CDS 2701325 2701927 . + 0 ID=cds-WP_003899311.1;Parent=gene-AL55_RS17820;Dbxref=GenBank:WP_003899311.1;Name=WP_003899311.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899311.1;locus_tag=AL55_RS17820;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_003899311.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2702042 2702470 . - . ID=gene-AL55_RS17825;Name=AL55_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17825;old_locus_tag=AL55_02494 NZ_KK316828.1 Protein Homology CDS 2702042 2702470 . - 0 ID=cds-WP_003412347.1;Parent=gene-AL55_RS17825;Dbxref=GenBank:WP_003412347.1;Name=WP_003412347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216922.1;locus_tag=AL55_RS17825;product=CBS domain-containing protein;protein_id=WP_003412347.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2702730 2703572 . + . ID=gene-AL55_RS17830;Name=AL55_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17830;old_locus_tag=AL55_02495 NZ_KK316828.1 Protein Homology CDS 2702730 2703572 . + 0 ID=cds-WP_003412350.1;Parent=gene-AL55_RS17830;Dbxref=GenBank:WP_003412350.1;Name=WP_003412350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216923.1;locus_tag=AL55_RS17830;product=Rv2407 family type 3 sulfatase;protein_id=WP_003412350.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2704119 2704322 . + . ID=gene-AL55_RS27745;Name=AL55_RS27745;end_range=2704322,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27745;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 2704119 2704322 . + 0 ID=cds-AL55_RS27745;Parent=gene-AL55_RS27745;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;end_range=2704322,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL55_RS27745;partial=true;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2704548 2705387 . - . ID=gene-AL55_RS17835;Name=AL55_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17835;old_locus_tag=AL55_02497 NZ_KK316828.1 Protein Homology CDS 2704548 2705387 . - 0 ID=cds-WP_003910910.1;Parent=gene-AL55_RS17835;Dbxref=GenBank:WP_003910910.1;Name=WP_003910910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216925.1;locus_tag=AL55_RS17835;product=transglutaminase-like domain-containing protein;protein_id=WP_003910910.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2705387 2706364 . - . ID=gene-AL55_RS17840;Name=AL55_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17840;old_locus_tag=AL55_02498 NZ_KK316828.1 Protein Homology CDS 2705387 2706364 . - 0 ID=cds-WP_003412359.1;Parent=gene-AL55_RS17840;Dbxref=GenBank:WP_003412359.1;Name=WP_003412359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216926.1;locus_tag=AL55_RS17840;product=alpha-E domain-containing protein;protein_id=WP_003412359.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2706364 2708019 . - . ID=gene-AL55_RS17845;Name=AL55_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17845;old_locus_tag=AL55_02499 NZ_KK316828.1 Protein Homology CDS 2706364 2708019 . - 0 ID=cds-WP_003412363.1;Parent=gene-AL55_RS17845;Dbxref=GenBank:WP_003412363.1;Name=WP_003412363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216927.1;locus_tag=AL55_RS17845;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_003412363.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2708129 2708389 . + . ID=gene-AL55_RS17850;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AL55_RS17850;old_locus_tag=AL55_02500 NZ_KK316828.1 Protein Homology CDS 2708129 2708389 . + 0 ID=cds-WP_003899314.1;Parent=gene-AL55_RS17850;Dbxref=GenBank:WP_003899314.1;Name=WP_003899314.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216928.1;locus_tag=AL55_RS17850;product=30S ribosomal protein S20;protein_id=WP_003899314.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2708405 2709355 . - . ID=gene-AL55_RS17855;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AL55_RS17855;old_locus_tag=AL55_02501 NZ_KK316828.1 Protein Homology CDS 2708405 2709355 . - 0 ID=cds-WP_003903885.1;Parent=gene-AL55_RS17855;Dbxref=GenBank:WP_003903885.1;Name=WP_003903885.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216929.3;locus_tag=AL55_RS17855;product=DNA polymerase III subunit delta;protein_id=WP_003903885.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2709386 2710930 . - . ID=gene-AL55_RS17860;Name=AL55_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17860;old_locus_tag=AL55_02502 NZ_KK316828.1 Protein Homology CDS 2709386 2710930 . - 0 ID=cds-WP_003412371.1;Parent=gene-AL55_RS17860;Dbxref=GenBank:WP_003412371.1;Name=WP_003412371.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216930.1;locus_tag=AL55_RS17860;product=ComEC/Rec2 family competence protein;protein_id=WP_003412371.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2710945 2711838 . - . ID=gene-AL55_RS17865;Name=AL55_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17865;old_locus_tag=AL55_02503 NZ_KK316828.1 Protein Homology CDS 2710945 2711838 . - 0 ID=cds-WP_003899316.1;Parent=gene-AL55_RS17865;Dbxref=GenBank:WP_003899316.1;Name=WP_003899316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216931.1;locus_tag=AL55_RS17865;product=ComEA family DNA-binding protein;protein_id=WP_003899316.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2712178 2713404 . - . ID=gene-AL55_RS17870;Name=eis;gbkey=Gene;gene=eis;gene_biotype=protein_coding;locus_tag=AL55_RS17870;old_locus_tag=AL55_02504 NZ_KK316828.1 Protein Homology CDS 2712178 2713404 . - 0 ID=cds-WP_003412375.1;Parent=gene-AL55_RS17870;Dbxref=GenBank:WP_003412375.1;Name=WP_003412375.1;gbkey=CDS;gene=eis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950714.1;locus_tag=AL55_RS17870;product=enhanced intracellular survival protein Eis;protein_id=WP_003412375.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2713526 2714368 . - . ID=gene-AL55_RS17875;Name=AL55_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17875;old_locus_tag=AL55_02505 NZ_KK316828.1 Protein Homology CDS 2713526 2714368 . - 0 ID=cds-WP_003412381.1;Parent=gene-AL55_RS17875;Dbxref=GenBank:WP_003412381.1;Name=WP_003412381.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216933.1;locus_tag=AL55_RS17875;product=DegV family protein;protein_id=WP_003412381.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2714449 2715192 . - . ID=gene-AL55_RS17880;Name=octT;gbkey=Gene;gene=octT;gene_biotype=protein_coding;locus_tag=AL55_RS17880;old_locus_tag=AL55_02506 NZ_KK316828.1 Protein Homology CDS 2714449 2715192 . - 0 ID=cds-WP_003412384.1;Parent=gene-AL55_RS17880;Dbxref=GenBank:WP_003412384.1;Name=WP_003412384.1;Ontology_term=GO:0016414;gbkey=CDS;gene=octT;go_function=diglucosylglycerate octanoyltransferase activity|0016414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216934.1;locus_tag=AL55_RS17880;product=diglucosylglycerate octanoyltransferase;protein_id=WP_003412384.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2715182 2715853 . - . ID=gene-AL55_RS17885;Name=gpgP;gbkey=Gene;gene=gpgP;gene_biotype=protein_coding;locus_tag=AL55_RS17885;old_locus_tag=AL55_02507 NZ_KK316828.1 Protein Homology CDS 2715182 2715853 . - 0 ID=cds-WP_003412388.1;Parent=gene-AL55_RS17885;Dbxref=GenBank:WP_003412388.1;Name=WP_003412388.1;gbkey=CDS;gene=gpgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216935.1;locus_tag=AL55_RS17885;product=glucosyl-3-phosphoglycerate phosphatase;protein_id=WP_003412388.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2715850 2716230 . - . ID=gene-AL55_RS17890;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=AL55_RS17890;old_locus_tag=AL55_02508 NZ_KK316828.1 Protein Homology CDS 2715850 2716230 . - 0 ID=cds-WP_003412394.1;Parent=gene-AL55_RS17890;Dbxref=GenBank:WP_003412394.1;Name=WP_003412394.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216936.1;locus_tag=AL55_RS17890;product=ribosome silencing factor;protein_id=WP_003412394.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2716227 2716871 . - . ID=gene-AL55_RS17895;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=AL55_RS17895;old_locus_tag=AL55_02509 NZ_KK316828.1 Protein Homology CDS 2716227 2716871 . - 0 ID=cds-WP_256382343.1;Parent=gene-AL55_RS17895;Dbxref=GenBank:WP_256382343.1;Name=WP_256382343.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007169525.1;locus_tag=AL55_RS17895;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_256382343.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2716898 2717101 . - . ID=gene-AL55_RS28100;Name=AL55_RS28100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28100 NZ_KK316828.1 Protein Homology CDS 2716898 2717101 . - 0 ID=cds-WP_003412401.1;Parent=gene-AL55_RS28100;Dbxref=GenBank:WP_003412401.1;Name=WP_003412401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003412401.1;locus_tag=AL55_RS28100;product=hypothetical protein;protein_id=WP_003412401.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2717137 2717409 . + . ID=gene-AL55_RS17900;Name=AL55_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17900;old_locus_tag=AL55_02510 NZ_KK316828.1 Protein Homology CDS 2717137 2717409 . + 0 ID=cds-WP_003412405.1;Parent=gene-AL55_RS17900;Dbxref=GenBank:WP_003412405.1;Name=WP_003412405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216938.1;locus_tag=AL55_RS17900;product=PIN domain-containing protein;protein_id=WP_003412405.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2717651 2718697 . + . ID=gene-AL55_RS17905;Name=AL55_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17905;old_locus_tag=AL55_02511 NZ_KK316828.1 Protein Homology CDS 2717651 2718697 . + 0 ID=cds-WP_003412408.1;Parent=gene-AL55_RS17905;Dbxref=GenBank:WP_003412408.1;Name=WP_003412408.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216939.1;locus_tag=AL55_RS17905;product=class I SAM-dependent methyltransferase;protein_id=WP_003412408.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2718830 2719831 . - . ID=gene-AL55_RS0105145;Name=AL55_RS0105145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105145;old_locus_tag=AL55_02512 NZ_KK316828.1 Protein Homology CDS 2718830 2719831 . - 0 ID=cds-WP_003902269.1;Parent=gene-AL55_RS0105145;Dbxref=GenBank:WP_003902269.1;Name=WP_003902269.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033542.1;locus_tag=AL55_RS0105145;product=IS110 family RNA-guided transposase;protein_id=WP_003902269.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2719920 2721362 . - . ID=gene-AL55_RS17910;Name=AL55_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17910;old_locus_tag=AL55_02513 NZ_KK316828.1 Protein Homology CDS 2719920 2721362 . - 0 ID=cds-WP_003412513.1;Parent=gene-AL55_RS17910;Dbxref=GenBank:WP_003412513.1;Name=WP_003412513.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216941.1;locus_tag=AL55_RS17910;product=vWA domain-containing protein;protein_id=WP_003412513.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2721362 2722237 . - . ID=gene-AL55_RS17915;Name=AL55_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17915;old_locus_tag=AL55_02514 NZ_KK316828.1 Protein Homology CDS 2721362 2722237 . - 0 ID=cds-WP_003412514.1;Parent=gene-AL55_RS17915;Dbxref=GenBank:WP_003412514.1;Name=WP_003412514.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216942.1;locus_tag=AL55_RS17915;product=AAA family ATPase;protein_id=WP_003412514.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2722264 2723511 . - . ID=gene-AL55_RS17920;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=AL55_RS17920;old_locus_tag=AL55_02515 NZ_KK316828.1 Protein Homology CDS 2722264 2723511 . - 0 ID=cds-WP_003412516.1;Parent=gene-AL55_RS17920;Dbxref=GenBank:WP_003412516.1;Name=WP_003412516.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216943.1;locus_tag=AL55_RS17920;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_003412516.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2723594 2723979 . - . ID=gene-AL55_RS0105155;Name=AL55_RS0105155;end_range=2723979,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0105155;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 2723594 2723979 . - 0 ID=cds-AL55_RS0105155;Parent=gene-AL55_RS0105155;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2723979,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908684.1;locus_tag=AL55_RS0105155;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2724227 2724814 . + . ID=gene-AL55_RS17930;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=AL55_RS17930;old_locus_tag=AL55_02517 NZ_KK316828.1 Protein Homology CDS 2724227 2724814 . + 0 ID=cds-WP_003412529.1;Parent=gene-AL55_RS17930;Dbxref=GenBank:WP_003412529.1;Name=WP_003412529.1;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216944.1;locus_tag=AL55_RS17930;product=peroxiredoxin AhpC;protein_id=WP_003412529.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2724840 2725373 . + . ID=gene-AL55_RS17935;Name=ahpD;gbkey=Gene;gene=ahpD;gene_biotype=protein_coding;locus_tag=AL55_RS17935;old_locus_tag=AL55_02518 NZ_KK316828.1 Protein Homology CDS 2724840 2725373 . + 0 ID=cds-WP_003412536.1;Parent=gene-AL55_RS17935;Dbxref=GenBank:WP_003412536.1;Name=WP_003412536.1;gbkey=CDS;gene=ahpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216945.1;locus_tag=AL55_RS17935;product=alkyl hydroperoxide reductase;protein_id=WP_003412536.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2725370 2725954 . - . ID=gene-AL55_RS17940;Name=AL55_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17940;old_locus_tag=AL55_02519 NZ_KK316828.1 Protein Homology CDS 2725370 2725954 . - 0 ID=cds-WP_003412549.1;Parent=gene-AL55_RS17940;Dbxref=GenBank:WP_003412549.1;Name=WP_003412549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177881.1;locus_tag=AL55_RS17940;product=PPE family protein;protein_id=WP_003412549.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2726001 2726300 . - . ID=gene-AL55_RS17945;Name=AL55_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17945;old_locus_tag=AL55_02520 NZ_KK316828.1 Protein Homology CDS 2726001 2726300 . - 0 ID=cds-WP_003412551.1;Parent=gene-AL55_RS17945;Dbxref=GenBank:WP_003412551.1;Name=WP_003412551.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177882.1;locus_tag=AL55_RS17945;product=PE family protein;protein_id=WP_003412551.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2726471 2726881 . - . ID=gene-AL55_RS17950;Name=AL55_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17950;old_locus_tag=AL55_02521 NZ_KK316828.1 Protein Homology CDS 2726471 2726881 . - 0 ID=cds-WP_003900520.1;Parent=gene-AL55_RS17950;Dbxref=GenBank:WP_003900520.1;Name=WP_003900520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216948.1;locus_tag=AL55_RS17950;product=hypothetical protein;protein_id=WP_003900520.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2726878 2727168 . - . ID=gene-AL55_RS17955;Name=nrtS;gbkey=Gene;gene=nrtS;gene_biotype=protein_coding;locus_tag=AL55_RS17955;old_locus_tag=AL55_02522 NZ_KK316828.1 Protein Homology CDS 2726878 2727168 . - 0 ID=cds-WP_003902270.1;Parent=gene-AL55_RS17955;Dbxref=GenBank:WP_003902270.1;Name=WP_003902270.1;gbkey=CDS;gene=nrtS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216949.1;locus_tag=AL55_RS17955;product=nitrate/nitrite transporter NrtS;protein_id=WP_003902270.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2727149 2728380 . - . ID=gene-AL55_RS17960;Name=AL55_RS17960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS17960;old_locus_tag=AL55_02523;pseudo=true NZ_KK316828.1 Protein Homology CDS 2727149 2728380 . - 0 ID=cds-AL55_RS17960;Parent=gene-AL55_RS17960;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216950.1;locus_tag=AL55_RS17960;product=mechanosensitive ion channel domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2728377 2730569 . - . ID=gene-AL55_RS17965;Name=AL55_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS17965;old_locus_tag=AL55_02524 NZ_KK316828.1 Protein Homology CDS 2728377 2730569 . - 0 ID=cds-WP_003412557.1;Parent=gene-AL55_RS17965;Dbxref=GenBank:WP_003412557.1;Name=WP_003412557.1;Ontology_term=GO:0009190,GO:0035556;gbkey=CDS;go_process=cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216951.1;locus_tag=AL55_RS17965;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003412557.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2731050 2731964 . + . ID=gene-AL55_RS17970;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=AL55_RS17970;old_locus_tag=AL55_02525 NZ_KK316828.1 Protein Homology CDS 2731050 2731964 . + 0 ID=cds-WP_003412561.1;Parent=gene-AL55_RS17970;Dbxref=GenBank:WP_003412561.1;Name=WP_003412561.1;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216952.1;locus_tag=AL55_RS17970;product=ribokinase RbsK;protein_id=WP_003412561.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2732196 2732614 . + . ID=gene-AL55_RS0105170;Name=AL55_RS0105170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0105170;old_locus_tag=AL55_02526;pseudo=true NZ_KK316828.1 Protein Homology CDS 2732196 2732614 . + 0 ID=cds-AL55_RS0105170;Parent=gene-AL55_RS0105170;Note=frameshifted;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216953.1;locus_tag=AL55_RS0105170;product=methyltransferase family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2732611 2734617 . - . ID=gene-AL55_RS17975;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=AL55_RS17975;old_locus_tag=AL55_02527 NZ_KK316828.1 Protein Homology CDS 2732611 2734617 . - 0 ID=cds-WP_055381138.1;Parent=gene-AL55_RS17975;Dbxref=GenBank:WP_055381138.1;Name=WP_055381138.1;Ontology_term=GO:0008152,GO:0009435,GO:0003952,GO:0004359,GO:0005524;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,ATP binding|0005524||IEA;go_process=metabolic process|0008152||IEA,NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216954.2;locus_tag=AL55_RS17975;product=NAD(+) synthase;protein_id=WP_055381138.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2734528 2734806 . + . ID=gene-AL55_RS27755;Name=AL55_RS27755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27755;old_locus_tag=AL55_02528 NZ_KK316828.1 Protein Homology CDS 2734528 2734806 . + 0 ID=cds-WP_010886145.1;Parent=gene-AL55_RS27755;Dbxref=GenBank:WP_010886145.1;Name=WP_010886145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177671.1;locus_tag=AL55_RS27755;product=hypothetical protein;protein_id=WP_010886145.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2734936 2736066 . - . ID=gene-AL55_RS17980;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=AL55_RS17980;old_locus_tag=AL55_02529 NZ_KK316828.1 Protein Homology CDS 2734936 2736066 . - 0 ID=cds-WP_003412568.1;Parent=gene-AL55_RS17980;Dbxref=GenBank:WP_003412568.1;Name=WP_003412568.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216955.1;locus_tag=AL55_RS17980;product=glutamate 5-kinase;protein_id=WP_003412568.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2736066 2737505 . - . ID=gene-AL55_RS17985;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=AL55_RS17985;old_locus_tag=AL55_02530 NZ_KK316828.1 Protein Homology CDS 2736066 2737505 . - 0 ID=cds-WP_003902272.1;Parent=gene-AL55_RS17985;Dbxref=GenBank:WP_003902272.1;Name=WP_003902272.1;Ontology_term=GO:0000166,GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=nucleotide binding|0000166||IEA,magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216956.1;locus_tag=AL55_RS17985;product=GTPase ObgE;protein_id=WP_003902272.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2737591 2737851 . - . ID=gene-AL55_RS17990;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AL55_RS17990;old_locus_tag=AL55_02531 NZ_KK316828.1 Protein Homology CDS 2737591 2737851 . - 0 ID=cds-WP_003412574.1;Parent=gene-AL55_RS17990;Dbxref=GenBank:WP_003412574.1;Name=WP_003412574.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216957.1;locus_tag=AL55_RS17990;product=50S ribosomal protein L27;protein_id=WP_003412574.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2737866 2738180 . - . ID=gene-AL55_RS17995;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AL55_RS17995;old_locus_tag=AL55_02532 NZ_KK316828.1 Protein Homology CDS 2737866 2738180 . - 0 ID=cds-WP_003412578.1;Parent=gene-AL55_RS17995;Dbxref=GenBank:WP_003412578.1;Name=WP_003412578.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216958.1;locus_tag=AL55_RS17995;product=50S ribosomal protein L21;protein_id=WP_003412578.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2738528 2740003 . + . ID=gene-AL55_RS18000;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=AL55_RS18000;old_locus_tag=AL55_02533 NZ_KK316828.1 Protein Homology CDS 2738528 2740003 . + 0 ID=cds-WP_003412582.1;Parent=gene-AL55_RS18000;Dbxref=GenBank:WP_003412582.1;Name=WP_003412582.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;gene=dctA;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216959.1;locus_tag=AL55_RS18000;product=cation:dicarboxylate symporter family transporter;protein_id=WP_003412582.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2739942 2742803 . - . ID=gene-AL55_RS18005;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=AL55_RS18005;old_locus_tag=AL55_02534 NZ_KK316828.1 Protein Homology CDS 2739942 2742803 . - 0 ID=cds-WP_003899322.1;Parent=gene-AL55_RS18005;Dbxref=GenBank:WP_003899322.1;Name=WP_003899322.1;Ontology_term=GO:0006397,GO:0003723,GO:0004519,GO:0004540,GO:0046872;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,endonuclease activity|0004519||IEA,RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=mRNA processing|0006397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216960.1;locus_tag=AL55_RS18005;product=ribonuclease E;protein_id=WP_003899322.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2743133 2743543 . - . ID=gene-AL55_RS18010;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AL55_RS18010;old_locus_tag=AL55_02535 NZ_KK316828.1 Protein Homology CDS 2743133 2743543 . - 0 ID=cds-WP_003412592.1;Parent=gene-AL55_RS18010;Dbxref=GenBank:WP_003412592.1;Name=WP_003412592.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216961.1;locus_tag=AL55_RS18010;product=nucleoside-diphosphate kinase;protein_id=WP_003412592.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2743586 2743957 . - . ID=gene-AL55_RS18015;Name=AL55_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18015;old_locus_tag=AL55_02536 NZ_KK316828.1 Protein Homology CDS 2743586 2743957 . - 0 ID=cds-WP_003412596.1;Parent=gene-AL55_RS18015;Dbxref=GenBank:WP_003412596.1;Name=WP_003412596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216962.1;locus_tag=AL55_RS18015;product=DUF4233 domain-containing protein;protein_id=WP_003412596.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2743954 2745417 . - . ID=gene-AL55_RS18020;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=AL55_RS18020;old_locus_tag=AL55_02537 NZ_KK316828.1 Protein Homology CDS 2743954 2745417 . - 0 ID=cds-WP_003899324.1;Parent=gene-AL55_RS18020;Dbxref=GenBank:WP_003899324.1;Name=WP_003899324.1;Ontology_term=GO:0009396,GO:0046654,GO:0004326,GO:0008841;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,dihydrofolate synthase activity|0008841||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216963.1;locus_tag=AL55_RS18020;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_003899324.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2745414 2748074 . - . ID=gene-AL55_RS18025;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=AL55_RS18025;old_locus_tag=AL55_02538 NZ_KK316828.1 Protein Homology CDS 2745414 2748074 . - 0 ID=cds-WP_003412604.1;Parent=gene-AL55_RS18025;Dbxref=GenBank:WP_003412604.1;Name=WP_003412604.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;gene=valS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908358.1;locus_tag=AL55_RS18025;product=valine--tRNA ligase;protein_id=WP_003412604.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2748132 2749391 . - . ID=gene-AL55_RS18030;Name=AL55_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18030;old_locus_tag=AL55_02539 NZ_KK316828.1 Protein Homology CDS 2748132 2749391 . - 0 ID=cds-WP_003412609.1;Parent=gene-AL55_RS18030;Dbxref=GenBank:WP_003412609.1;Name=WP_003412609.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216965.1;locus_tag=AL55_RS18030;product=saccharopine dehydrogenase family protein;protein_id=WP_003412609.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2749481 2749999 . - . ID=gene-AL55_RS18035;Name=rpfE;gbkey=Gene;gene=rpfE;gene_biotype=protein_coding;locus_tag=AL55_RS18035;old_locus_tag=AL55_02540 NZ_KK316828.1 Protein Homology CDS 2749481 2749999 . - 0 ID=cds-WP_003905853.1;Parent=gene-AL55_RS18035;Dbxref=GenBank:WP_003905853.1;Name=WP_003905853.1;gbkey=CDS;gene=rpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216966.1;locus_tag=AL55_RS18035;product=resuscitation-promoting factor protein RpfE;protein_id=WP_003905853.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2750081 2750479 . + . ID=gene-AL55_RS18040;Name=AL55_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18040;old_locus_tag=AL55_02541 NZ_KK316828.1 Protein Homology CDS 2750081 2750479 . + 0 ID=cds-WP_003899327.1;Parent=gene-AL55_RS18040;Dbxref=GenBank:WP_003899327.1;Name=WP_003899327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216967.1;locus_tag=AL55_RS18040;product=hypothetical protein;protein_id=WP_003899327.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2750667 2750813 . - . ID=gene-AL55_RS18045;Name=AL55_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18045;old_locus_tag=AL55_02542 NZ_KK316828.1 Protein Homology CDS 2750667 2750813 . - 0 ID=cds-WP_003908854.1;Parent=gene-AL55_RS18045;Dbxref=GenBank:WP_003908854.1;Name=WP_003908854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216968.1;locus_tag=AL55_RS18045;product=hypothetical protein;protein_id=WP_003908854.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2750837 2751442 . - . ID=gene-AL55_RS18050;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AL55_RS18050;old_locus_tag=AL55_02543 NZ_KK316828.1 Protein Homology CDS 2750837 2751442 . - 0 ID=cds-WP_003412618.1;Parent=gene-AL55_RS18050;Dbxref=GenBank:WP_003412618.1;Name=WP_003412618.1;Ontology_term=GO:0006777,GO:0061603;gbkey=CDS;gene=mobA;go_function=molybdenum cofactor guanylyltransferase activity|0061603||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216969.1;locus_tag=AL55_RS18050;product=molybdenum cofactor guanylyltransferase;protein_id=WP_003412618.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2751444 2752565 . - . ID=gene-AL55_RS18055;Name=AL55_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18055;old_locus_tag=AL55_02544 NZ_KK316828.1 Protein Homology CDS 2751444 2752565 . - 0 ID=cds-WP_003412624.1;Parent=gene-AL55_RS18055;Dbxref=GenBank:WP_003412624.1;Name=WP_003412624.1;Ontology_term=GO:0030976,GO:0046872;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216970.1;locus_tag=AL55_RS18055;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_003412624.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2752562 2754523 . - . ID=gene-AL55_RS18060;Name=AL55_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18060;old_locus_tag=AL55_02545 NZ_KK316828.1 Protein Homology CDS 2752562 2754523 . - 0 ID=cds-WP_003412627.1;Parent=gene-AL55_RS18060;Dbxref=GenBank:WP_003412627.1;Name=WP_003412627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216971.1;locus_tag=AL55_RS18060;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_003412627.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2754755 2756011 . - . ID=gene-AL55_RS18065;Name=AL55_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18065;old_locus_tag=AL55_02546 NZ_KK316828.1 Protein Homology CDS 2754755 2756011 . - 0 ID=cds-WP_003412631.1;Parent=gene-AL55_RS18065;Dbxref=GenBank:WP_003412631.1;Name=WP_003412631.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216972.1;locus_tag=AL55_RS18065;product=MFS transporter;protein_id=WP_003412631.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2756027 2757307 . - . ID=gene-AL55_RS18070;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AL55_RS18070;old_locus_tag=AL55_02547 NZ_KK316828.1 Protein Homology CDS 2756027 2757307 . - 0 ID=cds-WP_003412634.1;Parent=gene-AL55_RS18070;Dbxref=GenBank:WP_003412634.1;Name=WP_003412634.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216973.1;locus_tag=AL55_RS18070;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_003412634.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2757598 2758506 . + . ID=gene-AL55_RS18075;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=AL55_RS18075;old_locus_tag=AL55_02548 NZ_KK316828.1 Protein Homology CDS 2757598 2758506 . + 0 ID=cds-WP_003412639.1;Parent=gene-AL55_RS18075;Dbxref=GenBank:WP_003412639.1;Name=WP_003412639.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216974.1;locus_tag=AL55_RS18075;product=homocysteine S-methyltransferase;protein_id=WP_003412639.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2758673 2760199 . + . ID=gene-AL55_RS18080;Name=jefA;gbkey=Gene;gene=jefA;gene_biotype=protein_coding;locus_tag=AL55_RS18080;old_locus_tag=AL55_02549 NZ_KK316828.1 Protein Homology CDS 2758673 2760199 . + 0 ID=cds-WP_003412642.1;Parent=gene-AL55_RS18080;Dbxref=GenBank:WP_003412642.1;Name=WP_003412642.1;gbkey=CDS;gene=jefA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216975.1;locus_tag=AL55_RS18080;product=multidrug efflux pump JefA;protein_id=WP_003412642.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2760350 2760994 . - . ID=gene-AL55_RS18085;Name=clpP2;gbkey=Gene;gene=clpP2;gene_biotype=protein_coding;locus_tag=AL55_RS18085;old_locus_tag=AL55_02550 NZ_KK316828.1 Protein Homology CDS 2760350 2760994 . - 0 ID=cds-WP_003412648.1;Parent=gene-AL55_RS18085;Dbxref=GenBank:WP_003412648.1;Name=WP_003412648.1;gbkey=CDS;gene=clpP2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216976.1;locus_tag=AL55_RS18085;product=ATP-dependent CLP protease proteolytic subunit ClpP2;protein_id=WP_003412648.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2760991 2761593 . - . ID=gene-AL55_RS18090;Name=clpP1;gbkey=Gene;gene=clpP1;gene_biotype=protein_coding;locus_tag=AL55_RS18090;old_locus_tag=AL55_02551 NZ_KK316828.1 Protein Homology CDS 2760991 2761593 . - 0 ID=cds-WP_003412650.1;Parent=gene-AL55_RS18090;Dbxref=GenBank:WP_003412650.1;Name=WP_003412650.1;gbkey=CDS;gene=clpP1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177883.1;locus_tag=AL55_RS18090;product=ATP-dependent CLP protease proteolytic subunit ClpP1;protein_id=WP_003412650.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2761710 2763110 . - . ID=gene-AL55_RS18095;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AL55_RS18095;old_locus_tag=AL55_02552 NZ_KK316828.1 Protein Homology CDS 2761710 2763110 . - 0 ID=cds-WP_003899331.1;Parent=gene-AL55_RS18095;Dbxref=GenBank:WP_003899331.1;Name=WP_003899331.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216978.1;locus_tag=AL55_RS18095;product=trigger factor;protein_id=WP_003899331.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2763147 2763223 . - . ID=gene-AL55_RS18100;Name=AL55_RS18100;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS18100;old_locus_tag=AL55_02553 NZ_KK316828.1 tRNAscan-SE tRNA 2763147 2763223 . - . ID=rna-AL55_RS18100;Parent=gene-AL55_RS18100;anticodon=(pos:complement(2763187..2763189));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS18100;product=tRNA-Pro NZ_KK316828.1 tRNAscan-SE exon 2763147 2763223 . - . ID=exon-AL55_RS18100-1;Parent=rna-AL55_RS18100;anticodon=(pos:complement(2763187..2763189));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS18100;product=tRNA-Pro NZ_KK316828.1 RefSeq gene 2763360 2763430 . + . ID=gene-AL55_RS18105;Name=AL55_RS18105;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS18105;old_locus_tag=AL55_02554 NZ_KK316828.1 tRNAscan-SE tRNA 2763360 2763430 . + . ID=rna-AL55_RS18105;Parent=gene-AL55_RS18105;anticodon=(pos:2763392..2763394);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS18105;product=tRNA-Gly NZ_KK316828.1 tRNAscan-SE exon 2763360 2763430 . + . ID=exon-AL55_RS18105-1;Parent=rna-AL55_RS18105;anticodon=(pos:2763392..2763394);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS18105;product=tRNA-Gly NZ_KK316828.1 RefSeq gene 2763474 2764658 . + . ID=gene-AL55_RS18110;Name=lipP;gbkey=Gene;gene=lipP;gene_biotype=protein_coding;locus_tag=AL55_RS18110;old_locus_tag=AL55_02555 NZ_KK316828.1 Protein Homology CDS 2763474 2764658 . + 0 ID=cds-WP_003412656.1;Parent=gene-AL55_RS18110;Dbxref=GenBank:WP_003412656.1;Name=WP_003412656.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipP;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216979.1;locus_tag=AL55_RS18110;product=serine hydrolase domain-containing protein;protein_id=WP_003412656.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2764678 2765484 . - . ID=gene-AL55_RS18115;Name=AL55_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18115;old_locus_tag=AL55_02556 NZ_KK316828.1 Protein Homology CDS 2764678 2765484 . - 0 ID=cds-WP_003412657.1;Parent=gene-AL55_RS18115;Dbxref=GenBank:WP_003412657.1;Name=WP_003412657.1;Ontology_term=GO:0006281,GO:0006284,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0140078;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216980.1;locus_tag=AL55_RS18115;product=Fpg/Nei family DNA glycosylase;protein_id=WP_003412657.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2765490 2765969 . - . ID=gene-AL55_RS18120;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=AL55_RS18120;old_locus_tag=AL55_02557 NZ_KK316828.1 Protein Homology CDS 2765490 2765969 . - 0 ID=cds-WP_003412660.1;Parent=gene-AL55_RS18120;Dbxref=GenBank:WP_003412660.1;Name=WP_003412660.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;gene=rpiB;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019738062.1;locus_tag=AL55_RS18120;product=ribose-5-phosphate isomerase;protein_id=WP_003412660.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2766080 2766703 . - . ID=gene-AL55_RS18125;Name=AL55_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18125;old_locus_tag=AL55_02558 NZ_KK316828.1 Protein Homology CDS 2766080 2766703 . - 0 ID=cds-WP_003412664.1;Parent=gene-AL55_RS18125;Dbxref=GenBank:WP_003412664.1;Name=WP_003412664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216982.1;locus_tag=AL55_RS18125;product=Rv2466c family mycothiol-dependent reductase;protein_id=WP_003412664.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2766805 2769390 . + . ID=gene-AL55_RS18130;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AL55_RS18130;old_locus_tag=AL55_02559 NZ_KK316828.1 Protein Homology CDS 2766805 2769390 . + 0 ID=cds-WP_003412666.1;Parent=gene-AL55_RS18130;Dbxref=GenBank:WP_003412666.1;Name=WP_003412666.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177885.1;locus_tag=AL55_RS18130;product=aminopeptidase N;protein_id=WP_003412666.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2769463 2769930 . - . ID=gene-AL55_RS18135;Name=AL55_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18135;old_locus_tag=AL55_02560 NZ_KK316828.1 Protein Homology CDS 2769463 2769930 . - 0 ID=cds-WP_003904843.1;Parent=gene-AL55_RS18135;Dbxref=GenBank:WP_003904843.1;Name=WP_003904843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003904843.1;locus_tag=AL55_RS18135;product=DUF5130 domain-containing protein;protein_id=WP_003904843.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2769917 2770150 . - . ID=gene-AL55_RS18140;Name=ctaJ;gbkey=Gene;gene=ctaJ;gene_biotype=protein_coding;locus_tag=AL55_RS18140;old_locus_tag=AL55_02561 NZ_KK316828.1 Protein Homology CDS 2769917 2770150 . - 0 ID=cds-WP_003412671.1;Parent=gene-AL55_RS18140;Dbxref=GenBank:WP_003412671.1;Name=WP_003412671.1;gbkey=CDS;gene=ctaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411168.1;locus_tag=AL55_RS18140;product=aa3-type cytochrome oxidase subunit CtaJ;protein_id=WP_003412671.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2770186 2770854 . - . ID=gene-AL55_RS18145;Name=AL55_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18145;old_locus_tag=AL55_02562 NZ_KK316828.1 Protein Homology CDS 2770186 2770854 . - 0 ID=cds-WP_003899334.1;Parent=gene-AL55_RS18145;Dbxref=GenBank:WP_003899334.1;Name=WP_003899334.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216985.1;locus_tag=AL55_RS18145;product=HNH endonuclease;protein_id=WP_003899334.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2770997 2771383 . + . ID=gene-AL55_RS18150;Name=glbO;gbkey=Gene;gene=glbO;gene_biotype=protein_coding;locus_tag=AL55_RS18150;old_locus_tag=AL55_02563 NZ_KK316828.1 Protein Homology CDS 2770997 2771383 . + 0 ID=cds-WP_003412688.1;Parent=gene-AL55_RS18150;Dbxref=GenBank:WP_003412688.1;Name=WP_003412688.1;gbkey=CDS;gene=glbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216986.1;locus_tag=AL55_RS18150;product=group 2 truncated hemoglobin GlbO;protein_id=WP_003412688.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2771383 2773023 . + . ID=gene-AL55_RS18155;Name=aglA;gbkey=Gene;gene=aglA;gene_biotype=protein_coding;locus_tag=AL55_RS18155;old_locus_tag=AL55_02564 NZ_KK316828.1 Protein Homology CDS 2771383 2773023 . + 0 ID=cds-WP_003905855.1;Parent=gene-AL55_RS18155;Dbxref=GenBank:WP_003905855.1;Name=WP_003905855.1;gbkey=CDS;gene=aglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216987.1;locus_tag=AL55_RS18155;product=glycoside hydrolase family 13 protein;protein_id=WP_003905855.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2773091 2773384 . + . ID=gene-AL55_RS18160;Name=AL55_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18160;old_locus_tag=AL55_02565 NZ_KK316828.1 Protein Homology CDS 2773091 2773384 . + 0 ID=cds-WP_003899337.1;Parent=gene-AL55_RS18160;Dbxref=GenBank:WP_003899337.1;Name=WP_003899337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216988.1;locus_tag=AL55_RS18160;product=hypothetical protein;protein_id=WP_003899337.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2773387 2774103 . + . ID=gene-AL55_RS18165;Name=AL55_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18165;old_locus_tag=AL55_02566 NZ_KK316828.1 Protein Homology CDS 2773387 2774103 . + 0 ID=cds-WP_003412695.1;Parent=gene-AL55_RS18165;Dbxref=GenBank:WP_003412695.1;Name=WP_003412695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216989.1;locus_tag=AL55_RS18165;product=hypothetical protein;protein_id=WP_003412695.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2774135 2774788 . - . ID=gene-AL55_RS18170;Name=AL55_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18170;old_locus_tag=AL55_02567 NZ_KK316828.1 Protein Homology CDS 2774135 2774788 . - 0 ID=cds-WP_003412698.1;Parent=gene-AL55_RS18170;Dbxref=GenBank:WP_003412698.1;Name=WP_003412698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216990.1;locus_tag=AL55_RS18170;product=DUF8010 domain-containing protein;protein_id=WP_003412698.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2774794 2775210 . - . ID=gene-AL55_RS18175;Name=AL55_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18175;old_locus_tag=AL55_02568 NZ_KK316828.1 Protein Homology CDS 2774794 2775210 . - 0 ID=cds-WP_003412703.1;Parent=gene-AL55_RS18175;Dbxref=GenBank:WP_003412703.1;Name=WP_003412703.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216991.1;locus_tag=AL55_RS18175;product=acyl-CoA thioesterase;protein_id=WP_003412703.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2775207 2780081 . - . ID=gene-AL55_RS18180;Name=gdh;gbkey=Gene;gene=gdh;gene_biotype=protein_coding;locus_tag=AL55_RS18180;old_locus_tag=AL55_02569 NZ_KK316828.1 Protein Homology CDS 2775207 2780081 . - 0 ID=cds-WP_003899340.1;Parent=gene-AL55_RS18180;Dbxref=GenBank:WP_003899340.1;Name=WP_003899340.1;Ontology_term=GO:0004352;gbkey=CDS;gene=gdh;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216992.1;locus_tag=AL55_RS18180;product=NAD-glutamate dehydrogenase;protein_id=WP_003899340.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2780185 2781861 . - . ID=gene-AL55_RS18185;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=AL55_RS18185;old_locus_tag=AL55_02570 NZ_KK316828.1 Protein Homology CDS 2780185 2781861 . - 0 ID=cds-WP_003412708.1;Parent=gene-AL55_RS18185;Dbxref=GenBank:WP_003412708.1;Name=WP_003412708.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216993.1;locus_tag=AL55_RS18185;product=energy-dependent translational throttle protein EttA;protein_id=WP_003412708.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2781942 2782448 . - . ID=gene-AL55_RS18190;Name=AL55_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18190;old_locus_tag=AL55_02571 NZ_KK316828.1 Protein Homology CDS 2781942 2782448 . - 0 ID=cds-WP_003900529.1;Parent=gene-AL55_RS18190;Dbxref=GenBank:WP_003900529.1;Name=WP_003900529.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900529.1;locus_tag=AL55_RS18190;product=single-stranded DNA-binding protein;protein_id=WP_003900529.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2783036 2783359 . - . ID=gene-AL55_RS18195;Name=AL55_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18195;old_locus_tag=AL55_02572 NZ_KK316828.1 Protein Homology CDS 2783036 2783359 . - 0 ID=cds-WP_003902275.1;Parent=gene-AL55_RS18195;Dbxref=GenBank:WP_003902275.1;Name=WP_003902275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216997.1;locus_tag=AL55_RS18195;product=hypothetical protein;protein_id=WP_003902275.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2783375 2785744 . - . ID=gene-AL55_RS18200;Name=AL55_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18200;old_locus_tag=AL55_02573 NZ_KK316828.1 Protein Homology CDS 2783375 2785744 . - 0 ID=cds-WP_003901413.1;Parent=gene-AL55_RS18200;Dbxref=GenBank:WP_003901413.1;Name=WP_003901413.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216998.1;locus_tag=AL55_RS18200;product=glycerol-3-phosphate 1-O-acyltransferase;protein_id=WP_003901413.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2785741 2787483 . - . ID=gene-AL55_RS18205;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;locus_tag=AL55_RS18205;old_locus_tag=AL55_02574 NZ_KK316828.1 Protein Homology CDS 2785741 2787483 . - 0 ID=cds-WP_003899343.1;Parent=gene-AL55_RS18205;Dbxref=GenBank:WP_003899343.1;Name=WP_003899343.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;gene=plsC;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216999.1;locus_tag=AL55_RS18205;product=HAD-IB family hydrolase/lysophospholipid acyltransferase family protein;protein_id=WP_003899343.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2787480 2788955 . - . ID=gene-AL55_RS18210;Name=AL55_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18210;old_locus_tag=AL55_02575 NZ_KK316828.1 Protein Homology CDS 2787480 2788955 . - 0 ID=cds-WP_003412717.1;Parent=gene-AL55_RS18210;Dbxref=GenBank:WP_003412717.1;Name=WP_003412717.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217000.1;locus_tag=AL55_RS18210;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003412717.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2789184 2790449 . - . ID=gene-AL55_RS18215;Name=lipQ;gbkey=Gene;gene=lipQ;gene_biotype=protein_coding;locus_tag=AL55_RS18215;old_locus_tag=AL55_02576 NZ_KK316828.1 Protein Homology CDS 2789184 2790449 . - 0 ID=cds-WP_003902276.1;Parent=gene-AL55_RS18215;Dbxref=GenBank:WP_003902276.1;Name=WP_003902276.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipQ;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217001.1;locus_tag=AL55_RS18215;product=esterase LipQ;protein_id=WP_003902276.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2790637 2790710 . + . ID=gene-AL55_RS18220;Name=AL55_RS18220;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS18220;old_locus_tag=AL55_02577 NZ_KK316828.1 tRNAscan-SE tRNA 2790637 2790710 . + . ID=rna-AL55_RS18220;Parent=gene-AL55_RS18220;anticodon=(pos:2790671..2790673);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS18220;product=tRNA-Arg NZ_KK316828.1 tRNAscan-SE exon 2790637 2790710 . + . ID=exon-AL55_RS18220-1;Parent=rna-AL55_RS18220;anticodon=(pos:2790671..2790673);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS18220;product=tRNA-Arg NZ_KK316828.1 RefSeq gene 2790811 2791581 . + . ID=gene-AL55_RS18225;Name=AL55_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18225;old_locus_tag=AL55_02578 NZ_KK316828.1 Protein Homology CDS 2790811 2791581 . + 0 ID=cds-WP_003412728.1;Parent=gene-AL55_RS18225;Dbxref=GenBank:WP_003412728.1;Name=WP_003412728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217002.1;locus_tag=AL55_RS18225;product=enoyl-CoA hydratase;protein_id=WP_003412728.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2791762 2793846 . - . ID=gene-AL55_RS18230;Name=AL55_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18230;old_locus_tag=AL55_02579 NZ_KK316828.1 Protein Homology CDS 2791762 2793846 . - 0 ID=cds-WP_003910913.1;Parent=gene-AL55_RS18230;Dbxref=GenBank:WP_003910913.1;Name=WP_003910913.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177886.1;locus_tag=AL55_RS18230;product=PE family protein;protein_id=WP_003910913.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2793928 2797269 . - . ID=gene-AL55_RS18235;Name=AL55_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18235;old_locus_tag=AL55_02580 NZ_KK316828.1 Protein Homology CDS 2793928 2797269 . - 0 ID=cds-WP_019249816.1;Parent=gene-AL55_RS18235;Dbxref=GenBank:WP_019249816.1;Name=WP_019249816.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303515.1;locus_tag=AL55_RS18235;product=LuxR family transcriptional regulator;protein_id=WP_019249816.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2797307 2797606 . - . ID=gene-AL55_RS18240;Name=AL55_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18240;old_locus_tag=AL55_02581 NZ_KK316828.1 Protein Homology CDS 2797307 2797606 . - 0 ID=cds-WP_003899346.1;Parent=gene-AL55_RS18240;Dbxref=GenBank:WP_003899346.1;Name=WP_003899346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217005.1;locus_tag=AL55_RS18240;product=hypothetical protein;protein_id=WP_003899346.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2797715 2802697 . - . ID=gene-AL55_RS18245;Name=AL55_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18245;old_locus_tag=AL55_02582 NZ_KK316828.1 Protein Homology CDS 2797715 2802697 . - 0 ID=cds-WP_025234875.1;Parent=gene-AL55_RS18245;Dbxref=GenBank:WP_025234875.1;Name=WP_025234875.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177887.1;locus_tag=AL55_RS18245;product=PE family protein;protein_id=WP_025234875.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2802784 2802990 . - . ID=gene-AL55_RS0105180;Name=AL55_RS0105180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105180 NZ_KK316828.1 Protein Homology CDS 2802784 2802990 . - 0 ID=cds-WP_003899347.1;Parent=gene-AL55_RS0105180;Dbxref=GenBank:WP_003899347.1;Name=WP_003899347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030040.1;locus_tag=AL55_RS0105180;product=hypothetical protein;protein_id=WP_003899347.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2803126 2803749 . + . ID=gene-AL55_RS18250;Name=AL55_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18250;old_locus_tag=AL55_02583 NZ_KK316828.1 Protein Homology CDS 2803126 2803749 . + 0 ID=cds-WP_003900858.1;Parent=gene-AL55_RS18250;Dbxref=GenBank:WP_003900858.1;Name=WP_003900858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217007.1;locus_tag=AL55_RS18250;product=TIGR00725 family protein;protein_id=WP_003900858.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2803739 2804491 . + . ID=gene-AL55_RS18255;Name=AL55_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18255;old_locus_tag=AL55_02584 NZ_KK316828.1 Protein Homology CDS 2803739 2804491 . + 0 ID=cds-WP_003901416.1;Parent=gene-AL55_RS18255;Dbxref=GenBank:WP_003901416.1;Name=WP_003901416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217008.1;locus_tag=AL55_RS18255;product=thymidylate synthase family protein;protein_id=WP_003901416.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2804544 2804765 . + . ID=gene-AL55_RS18260;Name=AL55_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18260;old_locus_tag=AL55_02585 NZ_KK316828.1 Protein Homology CDS 2804544 2804765 . + 0 ID=cds-WP_003412749.1;Parent=gene-AL55_RS18260;Dbxref=GenBank:WP_003412749.1;Name=WP_003412749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217009.1;locus_tag=AL55_RS18260;product=antitoxin;protein_id=WP_003412749.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2804771 2805196 . + . ID=gene-AL55_RS18265;Name=AL55_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18265;old_locus_tag=AL55_02586 NZ_KK316828.1 Protein Homology CDS 2804771 2805196 . + 0 ID=cds-WP_003905869.1;Parent=gene-AL55_RS18265;Dbxref=GenBank:WP_003905869.1;Name=WP_003905869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217010.1;locus_tag=AL55_RS18265;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003905869.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2805219 2806400 . - . ID=gene-AL55_RS18270;Name=bkdC;gbkey=Gene;gene=bkdC;gene_biotype=protein_coding;locus_tag=AL55_RS18270;old_locus_tag=AL55_02587 NZ_KK316828.1 Protein Homology CDS 2805219 2806400 . - 0 ID=cds-WP_003905870.1;Parent=gene-AL55_RS18270;Dbxref=GenBank:WP_003905870.1;Name=WP_003905870.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;gene=bkdC;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217011.1;locus_tag=AL55_RS18270;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_003905870.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2806397 2807443 . - . ID=gene-AL55_RS18275;Name=bkdB;gbkey=Gene;gene=bkdB;gene_biotype=protein_coding;locus_tag=AL55_RS18275;old_locus_tag=AL55_02588 NZ_KK316828.1 Protein Homology CDS 2806397 2807443 . - 0 ID=cds-WP_003412757.1;Parent=gene-AL55_RS18275;Dbxref=GenBank:WP_003412757.1;Name=WP_003412757.1;gbkey=CDS;gene=bkdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217012.1;locus_tag=AL55_RS18275;product=3-methyl-2-oxobutanoate dehydrogenase subunit beta;protein_id=WP_003412757.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2807454 2808557 . - . ID=gene-AL55_RS18280;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=AL55_RS18280;old_locus_tag=AL55_02589 NZ_KK316828.1 Protein Homology CDS 2807454 2808557 . - 0 ID=cds-WP_003412761.1;Parent=gene-AL55_RS18280;Dbxref=GenBank:WP_003412761.1;Name=WP_003412761.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217013.1;locus_tag=AL55_RS18280;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_003412761.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2808816 2809637 . - . ID=gene-AL55_RS18285;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=AL55_RS18285;old_locus_tag=AL55_02590 NZ_KK316828.1 Protein Homology CDS 2808816 2809637 . - 0 ID=cds-WP_003412766.1;Parent=gene-AL55_RS18285;Dbxref=GenBank:WP_003412766.1;Name=WP_003412766.1;gbkey=CDS;gene=citE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217014.1;locus_tag=AL55_RS18285;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_003412766.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2809634 2810191 . - . ID=gene-AL55_RS18290;Name=AL55_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18290;old_locus_tag=AL55_02591 NZ_KK316828.1 Protein Homology CDS 2809634 2810191 . - 0 ID=cds-WP_078449199.1;Parent=gene-AL55_RS18290;Dbxref=GenBank:WP_078449199.1;Name=WP_078449199.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217015.1;locus_tag=AL55_RS18290;product=MaoC family dehydratase;protein_id=WP_078449199.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2810188 2811372 . - . ID=gene-AL55_RS18295;Name=AL55_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18295;old_locus_tag=AL55_02592 NZ_KK316828.1 Protein Homology CDS 2810188 2811372 . - 0 ID=cds-WP_003412771.1;Parent=gene-AL55_RS18295;Dbxref=GenBank:WP_003412771.1;Name=WP_003412771.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217016.1;locus_tag=AL55_RS18295;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003412771.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2811377 2813341 . - . ID=gene-AL55_RS18300;Name=AL55_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18300;old_locus_tag=AL55_02593 NZ_KK316828.1 Protein Homology CDS 2811377 2813341 . - 0 ID=cds-WP_003899356.1;Parent=gene-AL55_RS18300;Dbxref=GenBank:WP_003899356.1;Name=WP_003899356.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217017.1;locus_tag=AL55_RS18300;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_003899356.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2813346 2814935 . - . ID=gene-AL55_RS18305;Name=AL55_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18305;old_locus_tag=AL55_02594 NZ_KK316828.1 Protein Homology CDS 2813346 2814935 . - 0 ID=cds-WP_003905871.1;Parent=gene-AL55_RS18305;Dbxref=GenBank:WP_003905871.1;Name=WP_003905871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217018.1;locus_tag=AL55_RS18305;product=carboxyl transferase domain-containing protein;protein_id=WP_003905871.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2814932 2815588 . - . ID=gene-AL55_RS18310;Name=scoB;gbkey=Gene;gene=scoB;gene_biotype=protein_coding;locus_tag=AL55_RS18310;old_locus_tag=AL55_02595 NZ_KK316828.1 Protein Homology CDS 2814932 2815588 . - 0 ID=cds-WP_003412782.1;Parent=gene-AL55_RS18310;Dbxref=GenBank:WP_003412782.1;Name=WP_003412782.1;gbkey=CDS;gene=scoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217019.1;locus_tag=AL55_RS18310;product=CoA transferase subunit B;protein_id=WP_003412782.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2815585 2816331 . - . ID=gene-AL55_RS18315;Name=scoA;gbkey=Gene;gene=scoA;gene_biotype=protein_coding;locus_tag=AL55_RS18315;old_locus_tag=AL55_02596 NZ_KK316828.1 Protein Homology CDS 2815585 2816331 . - 0 ID=cds-WP_003412786.1;Parent=gene-AL55_RS18315;Dbxref=GenBank:WP_003412786.1;Name=WP_003412786.1;gbkey=CDS;gene=scoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217020.1;locus_tag=AL55_RS18315;product=CoA transferase subunit A;protein_id=WP_003412786.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2816414 2818057 . - . ID=gene-AL55_RS18320;Name=AL55_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18320;old_locus_tag=AL55_02597 NZ_KK316828.1 Protein Homology CDS 2816414 2818057 . - 0 ID=cds-WP_003899357.1;Parent=gene-AL55_RS18320;Dbxref=GenBank:WP_003899357.1;Name=WP_003899357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217021.1;locus_tag=AL55_RS18320;product=AMP-binding protein;protein_id=WP_003899357.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2818173 2818820 . + . ID=gene-AL55_RS18325;Name=AL55_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18325;old_locus_tag=AL55_02598 NZ_KK316828.1 Protein Homology CDS 2818173 2818820 . + 0 ID=cds-WP_003412790.1;Parent=gene-AL55_RS18325;Dbxref=GenBank:WP_003412790.1;Name=WP_003412790.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217022.1;locus_tag=AL55_RS18325;product=SACE_7040 family transcriptional regulator;protein_id=WP_003412790.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2818899 2819720 . + . ID=gene-AL55_RS18330;Name=AL55_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18330;old_locus_tag=AL55_02599 NZ_KK316828.1 Protein Homology CDS 2818899 2819720 . + 0 ID=cds-WP_003412795.1;Parent=gene-AL55_RS18330;Dbxref=GenBank:WP_003412795.1;Name=WP_003412795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217023.1;locus_tag=AL55_RS18330;product=MmpS family transport accessory protein;protein_id=WP_003412795.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2819717 2821054 . - . ID=gene-AL55_RS18335;Name=AL55_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18335;old_locus_tag=AL55_02600 NZ_KK316828.1 Protein Homology CDS 2819717 2821054 . - 0 ID=cds-WP_003412798.1;Parent=gene-AL55_RS18335;Dbxref=GenBank:WP_003412798.1;Name=WP_003412798.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217024.1;locus_tag=AL55_RS18335;product=MFS transporter;protein_id=WP_003412798.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2821139 2821945 . + . ID=gene-AL55_RS18340;Name=cmrA;gbkey=Gene;gene=cmrA;gene_biotype=protein_coding;locus_tag=AL55_RS18340;old_locus_tag=AL55_02601 NZ_KK316828.1 Protein Homology CDS 2821139 2821945 . + 0 ID=cds-WP_003412799.1;Parent=gene-AL55_RS18340;Dbxref=GenBank:WP_003412799.1;Name=WP_003412799.1;Note=Catalyzes the final step in mycolic acid biosynthesis.;Ontology_term=GO:0071768;gbkey=CDS;gene=cmrA;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217025.1;locus_tag=AL55_RS18340;product=mycolate reductase;protein_id=WP_003412799.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2821949 2823550 . - . ID=gene-AL55_RS18345;Name=AL55_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18345;old_locus_tag=AL55_02602 NZ_KK316828.1 Protein Homology CDS 2821949 2823550 . - 0 ID=cds-WP_003412803.1;Parent=gene-AL55_RS18345;Dbxref=GenBank:WP_003412803.1;Name=WP_003412803.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217026.1;locus_tag=AL55_RS18345;product=helicase HerA-like C-terminal domain-containing protein;protein_id=WP_003412803.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2823618 2824265 . + . ID=gene-AL55_RS18350;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AL55_RS18350;old_locus_tag=AL55_02603 NZ_KK316828.1 Protein Homology CDS 2823618 2824265 . + 0 ID=cds-WP_003899361.1;Parent=gene-AL55_RS18350;Dbxref=GenBank:WP_003899361.1;Name=WP_003899361.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217027.1;locus_tag=AL55_RS18350;product=oligoribonuclease;protein_id=WP_003899361.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2824315 2824390 . + . ID=gene-AL55_RS18355;Name=AL55_RS18355;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS18355;old_locus_tag=AL55_02604 NZ_KK316828.1 tRNAscan-SE tRNA 2824315 2824390 . + . ID=rna-AL55_RS18355;Parent=gene-AL55_RS18355;anticodon=(pos:2824348..2824350);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS18355;product=tRNA-His NZ_KK316828.1 tRNAscan-SE exon 2824315 2824390 . + . ID=exon-AL55_RS18355-1;Parent=rna-AL55_RS18355;anticodon=(pos:2824348..2824350);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS18355;product=tRNA-His NZ_KK316828.1 RefSeq gene 2825017 2826264 . - . ID=gene-AL55_RS18360;Name=AL55_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18360;old_locus_tag=AL55_02605 NZ_KK316828.1 Protein Homology CDS 2825017 2826264 . - 0 ID=cds-WP_003901078.1-3;Parent=gene-AL55_RS18360;Dbxref=GenBank:WP_003901078.1;Name=WP_003901078.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL55_RS18360;product=IS256-like element IS1081 family transposase;protein_id=WP_003901078.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2826622 2827044 . + . ID=gene-AL55_RS18370;Name=AL55_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18370;old_locus_tag=AL55_02607 NZ_KK316828.1 Protein Homology CDS 2826622 2827044 . + 0 ID=cds-WP_003412921.1;Parent=gene-AL55_RS18370;Dbxref=GenBank:WP_003412921.1;Name=WP_003412921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217029.1;locus_tag=AL55_RS18370;product=hypothetical protein;protein_id=WP_003412921.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2827338 2827799 . - . ID=gene-AL55_RS18375;Name=AL55_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18375;old_locus_tag=AL55_02608 NZ_KK316828.1 Protein Homology CDS 2827338 2827799 . - 0 ID=cds-WP_003899362.1;Parent=gene-AL55_RS18375;Dbxref=GenBank:WP_003899362.1;Name=WP_003899362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217030.1;locus_tag=AL55_RS18375;product=DUF4411 family protein;protein_id=WP_003899362.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2827805 2829052 . - . ID=gene-AL55_RS18380;Name=AL55_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18380;old_locus_tag=AL55_02609 NZ_KK316828.1 Protein Homology CDS 2827805 2829052 . - 0 ID=cds-WP_003412926.1;Parent=gene-AL55_RS18380;Dbxref=GenBank:WP_003412926.1;Name=WP_003412926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217031.1;locus_tag=AL55_RS18380;product=XRE family transcriptional regulator;protein_id=WP_003412926.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2829171 2829974 . - . ID=gene-AL55_RS18385;Name=AL55_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18385;old_locus_tag=AL55_02610 NZ_KK316828.1 Protein Homology CDS 2829171 2829974 . - 0 ID=cds-WP_003901417.1;Parent=gene-AL55_RS18385;Dbxref=GenBank:WP_003901417.1;Name=WP_003901417.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217032.2;locus_tag=AL55_RS18385;product=helix-turn-helix transcriptional regulator;protein_id=WP_003901417.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2829971 2830222 . - . ID=gene-AL55_RS18390;Name=AL55_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18390;old_locus_tag=AL55_02611 NZ_KK316828.1 Protein Homology CDS 2829971 2830222 . - 0 ID=cds-WP_003412936.1;Parent=gene-AL55_RS18390;Dbxref=GenBank:WP_003412936.1;Name=WP_003412936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217033.1;locus_tag=AL55_RS18390;product=hypothetical protein;protein_id=WP_003412936.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2830570 2831796 . - . ID=gene-AL55_RS18395;Name=ldtMt2;gbkey=Gene;gene=ldtMt2;gene_biotype=protein_coding;locus_tag=AL55_RS18395;old_locus_tag=AL55_02612 NZ_KK316828.1 Protein Homology CDS 2830570 2831796 . - 0 ID=cds-WP_003412938.1;Parent=gene-AL55_RS18395;Dbxref=GenBank:WP_003412938.1;Name=WP_003412938.1;gbkey=CDS;gene=ldtMt2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217034.1;locus_tag=AL55_RS18395;product=L%2CD-transpeptidase LdtMt2;protein_id=WP_003412938.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2831955 2832027 . + . ID=gene-AL55_RS18400;Name=AL55_RS18400;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS18400;old_locus_tag=AL55_02613 NZ_KK316828.1 tRNAscan-SE tRNA 2831955 2832027 . + . ID=rna-AL55_RS18400;Parent=gene-AL55_RS18400;anticodon=(pos:2831988..2831990);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS18400;product=tRNA-Lys NZ_KK316828.1 tRNAscan-SE exon 2831955 2832027 . + . ID=exon-AL55_RS18400-1;Parent=rna-AL55_RS18400;anticodon=(pos:2831988..2831990);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS18400;product=tRNA-Lys NZ_KK316828.1 RefSeq gene 2832246 2833724 . + . ID=gene-AL55_RS18405;Name=AL55_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18405;old_locus_tag=AL55_02614 NZ_KK316828.1 Protein Homology CDS 2832246 2833724 . + 0 ID=cds-WP_003910917.1;Parent=gene-AL55_RS18405;Dbxref=GenBank:WP_003910917.1;Name=WP_003910917.1;Ontology_term=GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177888.1;locus_tag=AL55_RS18405;product=PecA family PE domain-processing aspartic protease;protein_id=WP_003910917.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2833849 2834076 . - . ID=gene-AL55_RS18410;Name=AL55_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18410;old_locus_tag=AL55_02615 NZ_KK316828.1 Protein Homology CDS 2833849 2834076 . - 0 ID=cds-WP_031695424.1;Parent=gene-AL55_RS18410;Dbxref=GenBank:WP_031695424.1;Name=WP_031695424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217036.1;locus_tag=AL55_RS18410;product=DUF3618 domain-containing protein;protein_id=WP_031695424.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2834145 2834618 . + . ID=gene-AL55_RS18415;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=AL55_RS18415;old_locus_tag=AL55_02616 NZ_KK316828.1 Protein Homology CDS 2834145 2834618 . + 0 ID=cds-WP_003412944.1;Parent=gene-AL55_RS18415;Dbxref=GenBank:WP_003412944.1;Name=WP_003412944.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217037.1;locus_tag=AL55_RS18415;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_003412944.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2834590 2836002 . - . ID=gene-AL55_RS18420;Name=AL55_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18420;old_locus_tag=AL55_02617 NZ_KK316828.1 Protein Homology CDS 2834590 2836002 . - 0 ID=cds-WP_003412946.1;Parent=gene-AL55_RS18420;Dbxref=GenBank:WP_003412946.1;Name=WP_003412946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217038.1;locus_tag=AL55_RS18420;product=dipeptidase;protein_id=WP_003412946.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2835999 2836391 . - . ID=gene-AL55_RS18425;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=AL55_RS18425;old_locus_tag=AL55_02618 NZ_KK316828.1 Protein Homology CDS 2835999 2836391 . - 0 ID=cds-WP_003412952.1;Parent=gene-AL55_RS18425;Dbxref=GenBank:WP_003412952.1;Name=WP_003412952.1;gbkey=CDS;gene=acpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217039.1;locus_tag=AL55_RS18425;product=holo-ACP synthase AcpS;protein_id=WP_003412952.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2836584 2845793 . - . ID=gene-AL55_RS18430;Name=fas;gbkey=Gene;gene=fas;gene_biotype=protein_coding;locus_tag=AL55_RS18430;old_locus_tag=AL55_02619 NZ_KK316828.1 Protein Homology CDS 2836584 2845793 . - 0 ID=cds-WP_003901420.1;Parent=gene-AL55_RS18430;Dbxref=GenBank:WP_003901420.1;Name=WP_003901420.1;gbkey=CDS;gene=fas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217040.1;locus_tag=AL55_RS18430;product=fatty acid synthase;protein_id=WP_003901420.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2846313 2847035 . - . ID=gene-AL55_RS18435;Name=AL55_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18435;old_locus_tag=AL55_02620 NZ_KK316828.1 Protein Homology CDS 2846313 2847035 . - 0 ID=cds-WP_003412957.1;Parent=gene-AL55_RS18435;Dbxref=GenBank:WP_003412957.1;Name=WP_003412957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217041.1;locus_tag=AL55_RS18435;product=DUF1906 domain-containing protein;protein_id=WP_003412957.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2847552 2847774 . + . ID=gene-AL55_RS0105195;Name=AL55_RS0105195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0105195;old_locus_tag=AL55_02621;pseudo=true NZ_KK316828.1 Protein Homology CDS 2847552 2847774 . + 0 ID=cds-AL55_RS0105195;Parent=gene-AL55_RS0105195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217042.1;locus_tag=AL55_RS0105195;product=type II toxin-antitoxin system VapB family antitoxin;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2847771 2848172 . + . ID=gene-AL55_RS18440;Name=AL55_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18440;old_locus_tag=AL55_02622 NZ_KK316828.1 Protein Homology CDS 2847771 2848172 . + 0 ID=cds-WP_003412963.1;Parent=gene-AL55_RS18440;Dbxref=GenBank:WP_003412963.1;Name=WP_003412963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217043.1;locus_tag=AL55_RS18440;product=PIN domain-containing protein;protein_id=WP_003412963.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2848207 2849127 . - . ID=gene-AL55_RS18445;Name=mrr;gbkey=Gene;gene=mrr;gene_biotype=protein_coding;locus_tag=AL55_RS18445;old_locus_tag=AL55_02623 NZ_KK316828.1 Protein Homology CDS 2848207 2849127 . - 0 ID=cds-WP_003412965.1;Parent=gene-AL55_RS18445;Dbxref=GenBank:WP_003412965.1;Name=WP_003412965.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;gene=mrr;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217044.1;locus_tag=AL55_RS18445;product=restriction endonuclease;protein_id=WP_003412965.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2849468 2849713 . - . ID=gene-AL55_RS27350;Name=AL55_RS27350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27350 NZ_KK316828.1 Protein Homology CDS 2849468 2849713 . - 0 ID=cds-WP_071854223.1;Parent=gene-AL55_RS27350;Dbxref=GenBank:WP_071854223.1;Name=WP_071854223.1;Ontology_term=GO:0001558,GO:0003677,GO:0003700,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of cell growth|0001558||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014588586.1;locus_tag=AL55_RS27350;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_071854223.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2849772 2850722 . + . ID=gene-AL55_RS18450;Name=AL55_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18450;old_locus_tag=AL55_02624 NZ_KK316828.1 Protein Homology CDS 2849772 2850722 . + 0 ID=cds-WP_003911916.1;Parent=gene-AL55_RS18450;Dbxref=GenBank:WP_003911916.1;Name=WP_003911916.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019830685.1;locus_tag=AL55_RS18450;product=ERCC4 domain-containing protein;protein_id=WP_003911916.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2850723 2851142 . - . ID=gene-AL55_RS18455;Name=AL55_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18455;old_locus_tag=AL55_02625 NZ_KK316828.1 Protein Homology CDS 2850723 2851142 . - 0 ID=cds-WP_003412970.1;Parent=gene-AL55_RS18455;Dbxref=GenBank:WP_003412970.1;Name=WP_003412970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217046.1;locus_tag=AL55_RS18455;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003412970.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2851139 2851363 . - . ID=gene-AL55_RS18460;Name=AL55_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18460;old_locus_tag=AL55_02626 NZ_KK316828.1 Protein Homology CDS 2851139 2851363 . - 0 ID=cds-WP_003412975.1;Parent=gene-AL55_RS18460;Dbxref=GenBank:WP_003412975.1;Name=WP_003412975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177672.1;locus_tag=AL55_RS18460;product=antitoxin VapB39;protein_id=WP_003412975.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2851394 2854237 . - . ID=gene-AL55_RS18465;Name=AL55_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18465;old_locus_tag=AL55_02627 NZ_KK316828.1 Protein Homology CDS 2851394 2854237 . - 0 ID=cds-WP_003899363.1;Parent=gene-AL55_RS18465;Dbxref=GenBank:WP_003899363.1;Name=WP_003899363.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177889.1;locus_tag=AL55_RS18465;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_003899363.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2854309 2854710 . - . ID=gene-AL55_RS18470;Name=AL55_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18470;old_locus_tag=AL55_02628 NZ_KK316828.1 Protein Homology CDS 2854309 2854710 . - 0 ID=cds-WP_003412981.1;Parent=gene-AL55_RS18470;Dbxref=GenBank:WP_003412981.1;Name=WP_003412981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217048.1;locus_tag=AL55_RS18470;product=hypothetical protein;protein_id=WP_003412981.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2854710 2855180 . - . ID=gene-AL55_RS18475;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AL55_RS18475;old_locus_tag=AL55_02629 NZ_KK316828.1 Protein Homology CDS 2854710 2855180 . - 0 ID=cds-WP_003899364.1;Parent=gene-AL55_RS18475;Dbxref=GenBank:WP_003899364.1;Name=WP_003899364.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217049.1;locus_tag=AL55_RS18475;product=transcription antitermination factor NusB;protein_id=WP_003899364.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2855183 2855746 . - . ID=gene-AL55_RS18480;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AL55_RS18480;old_locus_tag=AL55_02630 NZ_KK316828.1 Protein Homology CDS 2855183 2855746 . - 0 ID=cds-WP_003412989.1;Parent=gene-AL55_RS18480;Dbxref=GenBank:WP_003412989.1;Name=WP_003412989.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011559756.1;locus_tag=AL55_RS18480;product=elongation factor P;protein_id=WP_003412989.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2855756 2856874 . - . ID=gene-AL55_RS18485;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=AL55_RS18485;old_locus_tag=AL55_02631 NZ_KK316828.1 Protein Homology CDS 2855756 2856874 . - 0 ID=cds-WP_003412996.1;Parent=gene-AL55_RS18485;Dbxref=GenBank:WP_003412996.1;Name=WP_003412996.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;gene=pepQ;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217051.1;locus_tag=AL55_RS18485;product=M24 family metallopeptidase;protein_id=WP_003412996.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2856908 2857600 . + . ID=gene-AL55_RS18490;Name=AL55_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18490;old_locus_tag=AL55_02632 NZ_KK316828.1 Protein Homology CDS 2856908 2857600 . + 0 ID=cds-WP_003412998.1;Parent=gene-AL55_RS18490;Dbxref=GenBank:WP_003412998.1;Name=WP_003412998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217052.1;locus_tag=AL55_RS18490;product=B-4DMT family transporter;protein_id=WP_003412998.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2857604 2858047 . - . ID=gene-AL55_RS18495;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=AL55_RS18495;old_locus_tag=AL55_02633 NZ_KK316828.1 Protein Homology CDS 2857604 2858047 . - 0 ID=cds-WP_003413001.1;Parent=gene-AL55_RS18495;Dbxref=GenBank:WP_003413001.1;Name=WP_003413001.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217053.1;locus_tag=AL55_RS18495;product=type II 3-dehydroquinate dehydratase;protein_id=WP_003413001.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2858044 2859132 . - . ID=gene-AL55_RS18500;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AL55_RS18500;old_locus_tag=AL55_02634 NZ_KK316828.1 Protein Homology CDS 2858044 2859132 . - 0 ID=cds-WP_003413008.1;Parent=gene-AL55_RS18500;Dbxref=GenBank:WP_003413008.1;Name=WP_003413008.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217054.1;locus_tag=AL55_RS18500;product=3-dehydroquinate synthase;protein_id=WP_003413008.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2859129 2859659 . - . ID=gene-AL55_RS18505;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AL55_RS18505;old_locus_tag=AL55_02635 NZ_KK316828.1 Protein Homology CDS 2859129 2859659 . - 0 ID=cds-WP_003413021.1;Parent=gene-AL55_RS18505;Dbxref=GenBank:WP_003413021.1;Name=WP_003413021.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217055.1;locus_tag=AL55_RS18505;product=shikimate kinase AroK;protein_id=WP_003413021.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2859663 2860868 . - . ID=gene-AL55_RS18510;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AL55_RS18510;old_locus_tag=AL55_02636 NZ_KK316828.1 Protein Homology CDS 2859663 2860868 . - 0 ID=cds-WP_003413027.1;Parent=gene-AL55_RS18510;Dbxref=GenBank:WP_003413027.1;Name=WP_003413027.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217056.1;locus_tag=AL55_RS18510;product=chorismate synthase;protein_id=WP_003413027.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2860976 2861290 . + . ID=gene-AL55_RS0105200;Name=AL55_RS0105200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105200;old_locus_tag=AL55_02637 NZ_KK316828.1 Protein Homology CDS 2860976 2861290 . + 0 ID=cds-WP_009937839.1;Parent=gene-AL55_RS0105200;Dbxref=GenBank:WP_009937839.1;Name=WP_009937839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293767.1;locus_tag=AL55_RS0105200;product=hypothetical protein;protein_id=WP_009937839.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2861586 2862797 . + . ID=gene-AL55_RS18515;Name=AL55_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18515;old_locus_tag=AL55_02638 NZ_KK316828.1 Protein Homology CDS 2861586 2862797 . + 0 ID=cds-WP_003900845.1;Parent=gene-AL55_RS18515;Dbxref=GenBank:WP_003900845.1;Name=WP_003900845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217058.1;locus_tag=AL55_RS18515;product=alpha/beta hydrolase family protein;protein_id=WP_003900845.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2862924 2863238 . + . ID=gene-AL55_RS0105205;Name=AL55_RS0105205;end_range=2863238,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0105205;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 2862924 2863238 . + 0 ID=cds-AL55_RS0105205;Parent=gene-AL55_RS0105205;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2863238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217059.1;locus_tag=AL55_RS0105205;partial=true;product=LppA family lipoprotein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2863138 2863623 . + . ID=gene-AL55_RS26285;Name=AL55_RS26285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS26285;partial=true;pseudo=true;start_range=.,2863138 NZ_KK316828.1 Protein Homology CDS 2863138 2863623 . + 0 ID=cds-AL55_RS26285;Parent=gene-AL55_RS26285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217058.1;locus_tag=AL55_RS26285;partial=true;product=alpha/beta hydrolase;pseudo=true;start_range=.,2863138;transl_table=11 NZ_KK316828.1 RefSeq gene 2863750 2864370 . + . ID=gene-AL55_RS18520;Name=AL55_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18520;old_locus_tag=AL55_02640 NZ_KK316828.1 Protein Homology CDS 2863750 2864370 . + 0 ID=cds-WP_031721884.1;Parent=gene-AL55_RS18520;Dbxref=GenBank:WP_031721884.1;Name=WP_031721884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217060.1;locus_tag=AL55_RS18520;product=LppA family lipoprotein;protein_id=WP_031721884.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2864367 2864644 . + . ID=gene-AL55_RS27010;Name=AL55_RS27010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27010;old_locus_tag=AL55_02641;pseudo=true NZ_KK316828.1 Protein Homology CDS 2864367 2864644 . + 0 ID=cds-AL55_RS27010;Parent=gene-AL55_RS27010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217061.1;locus_tag=AL55_RS27010;product=type II toxin-antitoxin system VapB family antitoxin;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2864737 2865150 . + . ID=gene-AL55_RS18525;Name=AL55_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18525;old_locus_tag=AL55_02642 NZ_KK316828.1 Protein Homology CDS 2864737 2865150 . + 0 ID=cds-WP_003413164.1;Parent=gene-AL55_RS18525;Dbxref=GenBank:WP_003413164.1;Name=WP_003413164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217062.1;locus_tag=AL55_RS18525;product=PIN domain nuclease;protein_id=WP_003413164.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2865189 2865446 . + . ID=gene-AL55_RS18530;Name=AL55_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18530;old_locus_tag=AL55_02643 NZ_KK316828.1 Protein Homology CDS 2865189 2865446 . + 0 ID=cds-WP_003413167.1;Parent=gene-AL55_RS18530;Dbxref=GenBank:WP_003413167.1;Name=WP_003413167.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217063.1;locus_tag=AL55_RS18530;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003413167.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2865443 2865820 . + . ID=gene-AL55_RS18535;Name=AL55_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18535;old_locus_tag=AL55_02644 NZ_KK316828.1 Protein Homology CDS 2865443 2865820 . + 0 ID=cds-WP_003413174.1;Parent=gene-AL55_RS18535;Dbxref=GenBank:WP_003413174.1;Name=WP_003413174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217064.1;locus_tag=AL55_RS18535;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003413174.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2865836 2866210 . - . ID=gene-AL55_RS18540;Name=AL55_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18540;old_locus_tag=AL55_02645 NZ_KK316828.1 Protein Homology CDS 2865836 2866210 . - 0 ID=cds-WP_003413177.1;Parent=gene-AL55_RS18540;Dbxref=GenBank:WP_003413177.1;Name=WP_003413177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837057.1;locus_tag=AL55_RS18540;product=hypothetical protein;protein_id=WP_003413177.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2866310 2866705 . - . ID=gene-AL55_RS18545;Name=vapC20;gbkey=Gene;gene=vapC20;gene_biotype=protein_coding;locus_tag=AL55_RS18545;old_locus_tag=AL55_02646 NZ_KK316828.1 Protein Homology CDS 2866310 2866705 . - 0 ID=cds-WP_003413180.1;Parent=gene-AL55_RS18545;Dbxref=GenBank:WP_003413180.1;Name=WP_003413180.1;gbkey=CDS;gene=vapC20;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217065.1;locus_tag=AL55_RS18545;product=type II toxin-antitoxin system toxin 23S rRNA-specific endonuclease VapC20;protein_id=WP_003413180.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2866702 2866947 . - . ID=gene-AL55_RS18550;Name=vapB20;gbkey=Gene;gene=vapB20;gene_biotype=protein_coding;locus_tag=AL55_RS18550;old_locus_tag=AL55_02647 NZ_KK316828.1 Protein Homology CDS 2866702 2866947 . - 0 ID=cds-WP_003413183.1;Parent=gene-AL55_RS18550;Dbxref=GenBank:WP_003413183.1;Name=WP_003413183.1;gbkey=CDS;gene=vapB20;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217066.1;locus_tag=AL55_RS18550;product=type II toxin-antitoxin system antitoxin VapB20;protein_id=WP_003413183.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2867358 2867777 . - . ID=gene-AL55_RS18555;Name=AL55_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18555;old_locus_tag=AL55_02648 NZ_KK316828.1 Protein Homology CDS 2867358 2867777 . - 0 ID=cds-WP_003413190.1;Parent=gene-AL55_RS18555;Dbxref=GenBank:WP_003413190.1;Name=WP_003413190.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217067.1;locus_tag=AL55_RS18555;product=A24 family peptidase;protein_id=WP_003413190.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2867789 2868598 . - . ID=gene-AL55_RS18560;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=AL55_RS18560;old_locus_tag=AL55_02649 NZ_KK316828.1 Protein Homology CDS 2867789 2868598 . - 0 ID=cds-WP_003413193.1;Parent=gene-AL55_RS18560;Dbxref=GenBank:WP_003413193.1;Name=WP_003413193.1;Ontology_term=GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217068.1;locus_tag=AL55_RS18560;product=shikimate dehydrogenase;protein_id=WP_003413193.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2868595 2869848 . - . ID=gene-AL55_RS18565;Name=AL55_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18565;old_locus_tag=AL55_02650 NZ_KK316828.1 Protein Homology CDS 2868595 2869848 . - 0 ID=cds-WP_003413196.1;Parent=gene-AL55_RS18565;Dbxref=GenBank:WP_003413196.1;Name=WP_003413196.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932,GO:0016829;gbkey=CDS;go_function=lytic endotransglycosylase activity|0008932||IEA,lyase activity|0016829||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217069.1;locus_tag=AL55_RS18565;product=endolytic transglycosylase MltG;protein_id=WP_003413196.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2869841 2870353 . - . ID=gene-AL55_RS18570;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=AL55_RS18570;old_locus_tag=AL55_02651 NZ_KK316828.1 Protein Homology CDS 2869841 2870353 . - 0 ID=cds-WP_003413197.1;Parent=gene-AL55_RS18570;Dbxref=GenBank:WP_003413197.1;Name=WP_003413197.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217070.1;locus_tag=AL55_RS18570;product=Holliday junction resolvase RuvX;protein_id=WP_003413197.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2870354 2873068 . - . ID=gene-AL55_RS18575;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AL55_RS18575;old_locus_tag=AL55_02652 NZ_KK316828.1 Protein Homology CDS 2870354 2873068 . - 0 ID=cds-WP_003902305.1;Parent=gene-AL55_RS18575;Dbxref=GenBank:WP_003902305.1;Name=WP_003902305.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217071.1;locus_tag=AL55_RS18575;product=alanine--tRNA ligase;protein_id=WP_003902305.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2873159 2873548 . - . ID=gene-AL55_RS18580;Name=AL55_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18580;old_locus_tag=AL55_02653 NZ_KK316828.1 Protein Homology CDS 2873159 2873548 . - 0 ID=cds-WP_003413208.1;Parent=gene-AL55_RS18580;Dbxref=GenBank:WP_003413208.1;Name=WP_003413208.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217072.1;locus_tag=AL55_RS18580;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_003413208.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2873709 2874329 . + . ID=gene-AL55_RS18585;Name=AL55_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18585;old_locus_tag=AL55_02654 NZ_KK316828.1 Protein Homology CDS 2873709 2874329 . + 0 ID=cds-WP_003918465.1;Parent=gene-AL55_RS18585;Dbxref=GenBank:WP_003918465.1;Name=WP_003918465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355845.1;locus_tag=AL55_RS18585;product=antibiotic biosynthesis monooxygenase;protein_id=WP_003918465.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2874501 2875124 . + . ID=gene-AL55_RS18590;Name=AL55_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18590;old_locus_tag=AL55_02655 NZ_KK316828.1 Protein Homology CDS 2874501 2875124 . + 0 ID=cds-WP_003917020.1;Parent=gene-AL55_RS18590;Dbxref=GenBank:WP_003917020.1;Name=WP_003917020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355845.1;locus_tag=AL55_RS18590;product=hypothetical protein;protein_id=WP_003917020.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2875154 2876512 . - . ID=gene-AL55_RS18595;Name=AL55_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18595;old_locus_tag=AL55_02656 NZ_KK316828.1 Protein Homology CDS 2875154 2876512 . - 0 ID=cds-WP_003899376.1;Parent=gene-AL55_RS18595;Dbxref=GenBank:WP_003899376.1;Name=WP_003899376.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217075.1;locus_tag=AL55_RS18595;product=replication-associated recombination protein A;protein_id=WP_003899376.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2876658 2877635 . + . ID=gene-AL55_RS18600;Name=AL55_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18600;old_locus_tag=AL55_02657 NZ_KK316828.1 Protein Homology CDS 2876658 2877635 . + 0 ID=cds-WP_003899377.1;Parent=gene-AL55_RS18600;Dbxref=GenBank:WP_003899377.1;Name=WP_003899377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217076.1;locus_tag=AL55_RS18600;product=DUF2189 domain-containing protein;protein_id=WP_003899377.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2877992 2878729 . + . ID=gene-AL55_RS0105220;Name=AL55_RS0105220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105220 NZ_KK316828.1 Protein Homology CDS 2877992 2878729 . + 0 ID=cds-WP_003910921.1;Parent=gene-AL55_RS0105220;Dbxref=GenBank:WP_003910921.1;Name=WP_003910921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950737.1;locus_tag=AL55_RS0105220;product=DUF2652 domain-containing protein;protein_id=WP_003910921.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2878872 2879921 . + . ID=gene-AL55_RS18605;Name=AL55_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18605;old_locus_tag=AL55_02660 NZ_KK316828.1 Protein Homology CDS 2878872 2879921 . + 0 ID=cds-WP_003413230.1;Parent=gene-AL55_RS18605;Dbxref=GenBank:WP_003413230.1;Name=WP_003413230.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217079.1;locus_tag=AL55_RS18605;product=ABC transporter permease;protein_id=WP_003413230.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2879924 2880916 . + . ID=gene-AL55_RS18610;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=AL55_RS18610;old_locus_tag=AL55_02661 NZ_KK316828.1 Protein Homology CDS 2879924 2880916 . + 0 ID=cds-WP_003901426.1;Parent=gene-AL55_RS18610;Dbxref=GenBank:WP_003901426.1;Name=WP_003901426.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;gene=glnQ;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217080.1;locus_tag=AL55_RS18610;product=ABC transporter ATP-binding protein;protein_id=WP_003901426.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2881193 2882944 . + . ID=gene-AL55_RS18615;Name=AL55_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18615;old_locus_tag=AL55_02662 NZ_KK316828.1 Protein Homology CDS 2881193 2882944 . + 0 ID=cds-WP_003901427.1;Parent=gene-AL55_RS18615;Dbxref=GenBank:WP_003901427.1;Name=WP_003901427.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217081.1;locus_tag=AL55_RS18615;product=patatin-like phospholipase family protein;protein_id=WP_003901427.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2883036 2886377 . + . ID=gene-AL55_RS18620;Name=AL55_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18620;old_locus_tag=AL55_02663 NZ_KK316828.1 Protein Homology CDS 2883036 2886377 . + 0 ID=cds-WP_003913357.1;Parent=gene-AL55_RS18620;Dbxref=GenBank:WP_003913357.1;Name=WP_003913357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293785.1;locus_tag=AL55_RS18620;product=transglutaminase family protein;protein_id=WP_003913357.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2886377 2889031 . + . ID=gene-AL55_RS18625;Name=AL55_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18625;old_locus_tag=AL55_02664 NZ_KK316828.1 Protein Homology CDS 2886377 2889031 . + 0 ID=cds-WP_003413330.1;Parent=gene-AL55_RS18625;Dbxref=GenBank:WP_003413330.1;Name=WP_003413330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217083.1;locus_tag=AL55_RS18625;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_003413330.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2889028 2890053 . - . ID=gene-AL55_RS18630;Name=AL55_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18630;old_locus_tag=AL55_02665 NZ_KK316828.1 Protein Homology CDS 2889028 2890053 . - 0 ID=cds-WP_003413332.1;Parent=gene-AL55_RS18630;Dbxref=GenBank:WP_003413332.1;Name=WP_003413332.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217084.1;locus_tag=AL55_RS18630;product=zinc-binding metallopeptidase family protein;protein_id=WP_003413332.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2890046 2890990 . - . ID=gene-AL55_RS18635;Name=AL55_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18635;old_locus_tag=AL55_02666 NZ_KK316828.1 Protein Homology CDS 2890046 2890990 . - 0 ID=cds-WP_003413334.1;Parent=gene-AL55_RS18635;Dbxref=GenBank:WP_003413334.1;Name=WP_003413334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217085.1;locus_tag=AL55_RS18635;product=transglutaminase family protein;protein_id=WP_003413334.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2891094 2891483 . + . ID=gene-AL55_RS18640;Name=AL55_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18640;old_locus_tag=AL55_02667 NZ_KK316828.1 Protein Homology CDS 2891094 2891483 . + 0 ID=cds-WP_003413336.1;Parent=gene-AL55_RS18640;Dbxref=GenBank:WP_003413336.1;Name=WP_003413336.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217086.1;locus_tag=AL55_RS18640;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_003413336.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2891475 2892542 . - . ID=gene-AL55_RS18645;Name=AL55_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18645;old_locus_tag=AL55_02668 NZ_KK316828.1 Protein Homology CDS 2891475 2892542 . - 0 ID=cds-WP_003899381.1;Parent=gene-AL55_RS18645;Dbxref=GenBank:WP_003899381.1;Name=WP_003899381.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217087.1;locus_tag=AL55_RS18645;product=FUSC family protein;protein_id=WP_003899381.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2892595 2894385 . - . ID=gene-AL55_RS18650;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AL55_RS18650;old_locus_tag=AL55_02669 NZ_KK316828.1 Protein Homology CDS 2892595 2894385 . - 0 ID=cds-WP_003899382.1;Parent=gene-AL55_RS18650;Dbxref=GenBank:WP_003899382.1;Name=WP_003899382.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217088.1;locus_tag=AL55_RS18650;product=aspartate--tRNA ligase;protein_id=WP_003899382.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2894478 2895365 . + . ID=gene-AL55_RS18655;Name=AL55_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18655;old_locus_tag=AL55_02670 NZ_KK316828.1 Protein Homology CDS 2894478 2895365 . + 0 ID=cds-WP_015385292.1;Parent=gene-AL55_RS18655;Dbxref=GenBank:WP_015385292.1;Name=WP_015385292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385292.1;locus_tag=AL55_RS18655;product=oxidoreductase;protein_id=WP_015385292.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2895388 2895891 . + . ID=gene-AL55_RS18660;Name=AL55_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18660;old_locus_tag=AL55_02671 NZ_KK316828.1 Protein Homology CDS 2895388 2895891 . + 0 ID=cds-WP_003413345.1;Parent=gene-AL55_RS18660;Dbxref=GenBank:WP_003413345.1;Name=WP_003413345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217090.1;locus_tag=AL55_RS18660;product=SRPBCC family protein;protein_id=WP_003413345.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2895921 2896802 . + . ID=gene-AL55_RS18665;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=AL55_RS18665;old_locus_tag=AL55_02672 NZ_KK316828.1 Protein Homology CDS 2895921 2896802 . + 0 ID=cds-WP_003899384.1;Parent=gene-AL55_RS18665;Dbxref=GenBank:WP_003899384.1;Name=WP_003899384.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217091.1;locus_tag=AL55_RS18665;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_003899384.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2896808 2897272 . - . ID=gene-AL55_RS18670;Name=AL55_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18670;old_locus_tag=AL55_02673 NZ_KK316828.1 Protein Homology CDS 2896808 2897272 . - 0 ID=cds-WP_003413352.1;Parent=gene-AL55_RS18670;Dbxref=GenBank:WP_003413352.1;Name=WP_003413352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217092.1;locus_tag=AL55_RS18670;product=membrane protein;protein_id=WP_003413352.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2897500 2899089 . + . ID=gene-AL55_RS18675;Name=AL55_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18675;old_locus_tag=AL55_02674 NZ_KK316828.1 Protein Homology CDS 2897500 2899089 . + 0 ID=cds-WP_003413355.1;Parent=gene-AL55_RS18675;Dbxref=GenBank:WP_003413355.1;Name=WP_003413355.1;Ontology_term=GO:0016311,GO:0003993,GO:0046872;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217093.1;locus_tag=AL55_RS18675;product=purple acid phosphatase family protein;protein_id=WP_003413355.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2899091 2900113 . - . ID=gene-AL55_RS18680;Name=AL55_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18680;old_locus_tag=AL55_02675 NZ_KK316828.1 Protein Homology CDS 2899091 2900113 . - 0 ID=cds-WP_003413359.1;Parent=gene-AL55_RS18680;Dbxref=GenBank:WP_003413359.1;Name=WP_003413359.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217094.1;locus_tag=AL55_RS18680;product=Rv2578c family radical SAM protein;protein_id=WP_003413359.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2900221 2901123 . + . ID=gene-AL55_RS18685;Name=dhaA;gbkey=Gene;gene=dhaA;gene_biotype=protein_coding;locus_tag=AL55_RS18685;old_locus_tag=AL55_02676 NZ_KK316828.1 Protein Homology CDS 2900221 2901123 . + 0 ID=cds-WP_003413363.1;Parent=gene-AL55_RS18685;Dbxref=GenBank:WP_003413363.1;Name=WP_003413363.1;Ontology_term=GO:0018786;gbkey=CDS;gene=dhaA;go_function=haloalkane dehalogenase activity|0018786||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177890.1;locus_tag=AL55_RS18685;product=haloalkane dehalogenase;protein_id=WP_003413363.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2901403 2902674 . - . ID=gene-AL55_RS18690;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AL55_RS18690;old_locus_tag=AL55_02677 NZ_KK316828.1 Protein Homology CDS 2901403 2902674 . - 0 ID=cds-WP_003413365.1;Parent=gene-AL55_RS18690;Dbxref=GenBank:WP_003413365.1;Name=WP_003413365.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217096.1;locus_tag=AL55_RS18690;product=histidine--tRNA ligase;protein_id=WP_003413365.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2902671 2903345 . - . ID=gene-AL55_RS18695;Name=AL55_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18695;old_locus_tag=AL55_02678 NZ_KK316828.1 Protein Homology CDS 2902671 2903345 . - 0 ID=cds-WP_003413366.1;Parent=gene-AL55_RS18695;Dbxref=GenBank:WP_003413366.1;Name=WP_003413366.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217097.1;locus_tag=AL55_RS18695;product=MBL fold metallo-hydrolase;protein_id=WP_003413366.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2903444 2904322 . + . ID=gene-AL55_RS18700;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=AL55_RS18700;old_locus_tag=AL55_02679 NZ_KK316828.1 Protein Homology CDS 2903444 2904322 . + 0 ID=cds-WP_003917032.1;Parent=gene-AL55_RS18700;Dbxref=GenBank:WP_003917032.1;Name=WP_003917032.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917032.1;locus_tag=AL55_RS18700;product=peptidylprolyl isomerase PpiB;protein_id=WP_003917032.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2904408 2906780 . - . ID=gene-AL55_RS18705;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AL55_RS18705;old_locus_tag=AL55_02680 NZ_KK316828.1 Protein Homology CDS 2904408 2906780 . - 0 ID=cds-WP_003413368.1;Parent=gene-AL55_RS18705;Dbxref=GenBank:WP_003413368.1;Name=WP_003413368.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;gene=relA;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217099.1;locus_tag=AL55_RS18705;product=RelA/SpoT family protein;protein_id=WP_003413368.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2906811 2907482 . - . ID=gene-AL55_RS0105225;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=AL55_RS0105225;old_locus_tag=AL55_02681 NZ_KK316828.1 Protein Homology CDS 2906811 2907482 . - 0 ID=cds-WP_003413369.1;Parent=gene-AL55_RS0105225;Dbxref=GenBank:WP_003413369.1;Name=WP_003413369.1;Ontology_term=GO:0009116,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217100.1;locus_tag=AL55_RS0105225;product=adenine phosphoribosyltransferase;protein_id=WP_003413369.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2907586 2909259 . - . ID=gene-AL55_RS18710;Name=AL55_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18710;old_locus_tag=AL55_02682 NZ_KK316828.1 Protein Homology CDS 2907586 2909259 . - 0 ID=cds-WP_003413373.1;Parent=gene-AL55_RS18710;Dbxref=GenBank:WP_003413373.1;Name=WP_003413373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217101.1;locus_tag=AL55_RS18710;product=ABC transporter substrate-binding protein;protein_id=WP_003413373.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2909265 2910593 . - . ID=gene-AL55_RS18715;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=AL55_RS18715;old_locus_tag=AL55_02683 NZ_KK316828.1 Protein Homology CDS 2909265 2910593 . - 0 ID=cds-WP_003899387.1;Parent=gene-AL55_RS18715;Dbxref=GenBank:WP_003899387.1;Name=WP_003899387.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217102.1;locus_tag=AL55_RS18715;product=protein translocase subunit SecF;protein_id=WP_003899387.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2910597 2912318 . - . ID=gene-AL55_RS18720;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AL55_RS18720;old_locus_tag=AL55_02684 NZ_KK316828.1 Protein Homology CDS 2910597 2912318 . - 0 ID=cds-WP_003413385.1;Parent=gene-AL55_RS18720;Dbxref=GenBank:WP_003413385.1;Name=WP_003413385.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217103.1;locus_tag=AL55_RS18720;product=protein translocase subunit SecD;protein_id=WP_003413385.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2912428 2912775 . - . ID=gene-AL55_RS18725;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AL55_RS18725;old_locus_tag=AL55_02685 NZ_KK316828.1 Protein Homology CDS 2912428 2912775 . - 0 ID=cds-WP_003413391.1;Parent=gene-AL55_RS18725;Dbxref=GenBank:WP_003413391.1;Name=WP_003413391.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217104.1;locus_tag=AL55_RS18725;product=preprotein translocase subunit YajC;protein_id=WP_003413391.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2912942 2914291 . + . ID=gene-AL55_RS18730;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=AL55_RS18730;old_locus_tag=AL55_02686 NZ_KK316828.1 Protein Homology CDS 2912942 2914291 . + 0 ID=cds-WP_003413395.1;Parent=gene-AL55_RS18730;Dbxref=GenBank:WP_003413395.1;Name=WP_003413395.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217105.1;locus_tag=AL55_RS18730;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_003413395.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2914453 2917959 . + . ID=gene-AL55_RS18735;Name=car;gbkey=Gene;gene=car;gene_biotype=protein_coding;locus_tag=AL55_RS18735;old_locus_tag=AL55_02687 NZ_KK316828.1 Protein Homology CDS 2914453 2917959 . + 0 ID=cds-WP_003413409.1;Parent=gene-AL55_RS18735;Dbxref=GenBank:WP_003413409.1;Name=WP_003413409.1;Ontology_term=GO:0006629,GO:0005524,GO:0016620,GO:0031177,GO:0050661;gbkey=CDS;gene=car;go_function=ATP binding|0005524||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,phosphopantetheine binding|0031177||IEA,NADP binding|0050661||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217106.1;locus_tag=AL55_RS18735;product=carboxylic acid reductase;protein_id=WP_003413409.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2918133 2919764 . + . ID=gene-AL55_RS18740;Name=AL55_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18740;old_locus_tag=AL55_02688 NZ_KK316828.1 Protein Homology CDS 2918133 2919764 . + 0 ID=cds-WP_009940036.1;Parent=gene-AL55_RS18740;Dbxref=GenBank:WP_009940036.1;Name=WP_009940036.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177891.1;locus_tag=AL55_RS18740;product=PE family protein;protein_id=WP_009940036.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2919781 2920815 . - . ID=gene-AL55_RS18745;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AL55_RS18745;old_locus_tag=AL55_02689 NZ_KK316828.1 Protein Homology CDS 2919781 2920815 . - 0 ID=cds-WP_003413416.1;Parent=gene-AL55_RS18745;Dbxref=GenBank:WP_003413416.1;Name=WP_003413416.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217108.1;locus_tag=AL55_RS18745;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_003413416.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2920812 2921402 . - . ID=gene-AL55_RS18750;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AL55_RS18750;old_locus_tag=AL55_02690 NZ_KK316828.1 Protein Homology CDS 2920812 2921402 . - 0 ID=cds-WP_003413421.1;Parent=gene-AL55_RS18750;Dbxref=GenBank:WP_003413421.1;Name=WP_003413421.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217109.1;locus_tag=AL55_RS18750;product=Holliday junction branch migration protein RuvA;protein_id=WP_003413421.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2921399 2921965 . - . ID=gene-AL55_RS18755;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AL55_RS18755;old_locus_tag=AL55_02691 NZ_KK316828.1 Protein Homology CDS 2921399 2921965 . - 0 ID=cds-WP_003413426.1;Parent=gene-AL55_RS18755;Dbxref=GenBank:WP_003413426.1;Name=WP_003413426.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217110.1;locus_tag=AL55_RS18755;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_003413426.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2922074 2922319 . + . ID=gene-AL55_RS18760;Name=AL55_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18760;old_locus_tag=AL55_02692 NZ_KK316828.1 Protein Homology CDS 2922074 2922319 . + 0 ID=cds-WP_003413429.1;Parent=gene-AL55_RS18760;Dbxref=GenBank:WP_003413429.1;Name=WP_003413429.1;Ontology_term=GO:0001558,GO:0003677,GO:0003700,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of cell growth|0001558||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217111.1;locus_tag=AL55_RS18760;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_003413429.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2922316 2922720 . + . ID=gene-AL55_RS18765;Name=AL55_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18765;old_locus_tag=AL55_02693 NZ_KK316828.1 Protein Homology CDS 2922316 2922720 . + 0 ID=cds-WP_003413432.1;Parent=gene-AL55_RS18765;Dbxref=GenBank:WP_003413432.1;Name=WP_003413432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217112.1;locus_tag=AL55_RS18765;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003413432.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2922937 2923557 . + . ID=gene-AL55_RS18770;Name=AL55_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18770;old_locus_tag=AL55_02694 NZ_KK316828.1 Protein Homology CDS 2922937 2923557 . + 0 ID=cds-WP_003413441.1;Parent=gene-AL55_RS18770;Dbxref=GenBank:WP_003413441.1;Name=WP_003413441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217113.1;locus_tag=AL55_RS18770;product=DUF4178 domain-containing protein;protein_id=WP_003413441.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2923568 2924062 . + . ID=gene-AL55_RS18775;Name=AL55_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18775;old_locus_tag=AL55_02695 NZ_KK316828.1 Protein Homology CDS 2923568 2924062 . + 0 ID=cds-WP_003413444.1;Parent=gene-AL55_RS18775;Dbxref=GenBank:WP_003413444.1;Name=WP_003413444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217114.1;locus_tag=AL55_RS18775;product=DUF2617 family protein;protein_id=WP_003413444.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2924059 2924490 . + . ID=gene-AL55_RS18780;Name=AL55_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18780;old_locus_tag=AL55_02696 NZ_KK316828.1 Protein Homology CDS 2924059 2924490 . + 0 ID=cds-WP_003899390.1;Parent=gene-AL55_RS18780;Dbxref=GenBank:WP_003899390.1;Name=WP_003899390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217115.1;locus_tag=AL55_RS18780;product=DUF4247 domain-containing protein;protein_id=WP_003899390.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2924515 2924973 . + . ID=gene-AL55_RS18785;Name=AL55_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18785;old_locus_tag=AL55_02697 NZ_KK316828.1 Protein Homology CDS 2924515 2924973 . + 0 ID=cds-WP_003413451.1;Parent=gene-AL55_RS18785;Dbxref=GenBank:WP_003413451.1;Name=WP_003413451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003413451.1;locus_tag=AL55_RS18785;product=DUF350 domain-containing protein;protein_id=WP_003413451.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2924970 2926541 . + . ID=gene-AL55_RS18790;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=AL55_RS18790;old_locus_tag=AL55_02698 NZ_KK316828.1 Protein Homology CDS 2924970 2926541 . + 0 ID=cds-WP_003899392.1;Parent=gene-AL55_RS18790;Dbxref=GenBank:WP_003899392.1;Name=WP_003899392.1;Ontology_term=GO:0003824;gbkey=CDS;gene=speE;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177892.1;locus_tag=AL55_RS18790;product=polyamine aminopropyltransferase;protein_id=WP_003899392.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2926652 2926939 . + . ID=gene-AL55_RS18795;Name=AL55_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18795;old_locus_tag=AL55_02699 NZ_KK316828.1 Protein Homology CDS 2926652 2926939 . + 0 ID=cds-WP_003413456.1;Parent=gene-AL55_RS18795;Dbxref=GenBank:WP_003413456.1;Name=WP_003413456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177673.1;locus_tag=AL55_RS18795;product=antitoxin VapB41;protein_id=WP_003413456.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2926926 2927366 . + . ID=gene-AL55_RS18800;Name=AL55_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18800;old_locus_tag=AL55_02700 NZ_KK316828.1 Protein Homology CDS 2926926 2927366 . + 0 ID=cds-WP_003413460.1;Parent=gene-AL55_RS18800;Dbxref=GenBank:WP_003413460.1;Name=WP_003413460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217118.1;locus_tag=AL55_RS18800;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003413460.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2927387 2928142 . - . ID=gene-AL55_RS18805;Name=AL55_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18805;old_locus_tag=AL55_02701 NZ_KK316828.1 Protein Homology CDS 2927387 2928142 . - 0 ID=cds-WP_003413464.1;Parent=gene-AL55_RS18805;Dbxref=GenBank:WP_003413464.1;Name=WP_003413464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217119.1;locus_tag=AL55_RS18805;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_003413464.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2928275 2928871 . - . ID=gene-AL55_RS18810;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=AL55_RS18810;old_locus_tag=AL55_02702 NZ_KK316828.1 Protein Homology CDS 2928275 2928871 . - 0 ID=cds-WP_003413465.1;Parent=gene-AL55_RS18810;Dbxref=GenBank:WP_003413465.1;Name=WP_003413465.1;Ontology_term=GO:0042823,GO:0004359,GO:0016884;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217120.1;locus_tag=AL55_RS18810;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_003413465.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2928879 2929724 . - . ID=gene-AL55_RS18815;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AL55_RS18815;old_locus_tag=AL55_02703 NZ_KK316828.1 Protein Homology CDS 2928879 2929724 . - 0 ID=cds-WP_003413466.1;Parent=gene-AL55_RS18815;Dbxref=GenBank:WP_003413466.1;Name=WP_003413466.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217121.1;locus_tag=AL55_RS18815;product=acyl-CoA thioesterase II;protein_id=WP_003413466.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2929753 2930652 . - . ID=gene-AL55_RS18820;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=AL55_RS18820;old_locus_tag=AL55_02704 NZ_KK316828.1 Protein Homology CDS 2929753 2930652 . - 0 ID=cds-WP_003413468.1;Parent=gene-AL55_RS18820;Dbxref=GenBank:WP_003413468.1;Name=WP_003413468.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217122.1;locus_tag=AL55_RS18820;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_003413468.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2930780 2931454 . + . ID=gene-AL55_RS18825;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=AL55_RS18825;old_locus_tag=AL55_02705 NZ_KK316828.1 Protein Homology CDS 2930780 2931454 . + 0 ID=cds-WP_003413471.1;Parent=gene-AL55_RS18825;Dbxref=GenBank:WP_003413471.1;Name=WP_003413471.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217123.1;locus_tag=AL55_RS18825;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_003413471.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2931628 2933370 . + . ID=gene-AL55_RS18830;Name=AL55_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18830;old_locus_tag=AL55_02706 NZ_KK316828.1 Protein Homology CDS 2931628 2933370 . + 0 ID=cds-WP_003899395.1;Parent=gene-AL55_RS18830;Dbxref=GenBank:WP_003899395.1;Name=WP_003899395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177893.1;locus_tag=AL55_RS18830;product=PE-PPE domain-containing protein;protein_id=WP_003899395.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2933392 2934447 . - . ID=gene-AL55_RS18835;Name=AL55_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18835;old_locus_tag=AL55_02707 NZ_KK316828.1 Protein Homology CDS 2933392 2934447 . - 0 ID=cds-WP_003413475.1;Parent=gene-AL55_RS18835;Dbxref=GenBank:WP_003413475.1;Name=WP_003413475.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217125.1;locus_tag=AL55_RS18835;product=NUDIX hydrolase;protein_id=WP_003413475.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2934447 2935583 . - . ID=gene-AL55_RS18840;Name=pimA;gbkey=Gene;gene=pimA;gene_biotype=protein_coding;locus_tag=AL55_RS18840;old_locus_tag=AL55_02708 NZ_KK316828.1 Protein Homology CDS 2934447 2935583 . - 0 ID=cds-WP_003413478.1;Parent=gene-AL55_RS18840;Dbxref=GenBank:WP_003413478.1;Name=WP_003413478.1;gbkey=CDS;gene=pimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217126.1;locus_tag=AL55_RS18840;product=phosphatidyl-myo-inositol alpha-mannosyltransferase;protein_id=WP_003413478.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2935594 2936544 . - . ID=gene-AL55_RS18845;Name=AL55_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18845;old_locus_tag=AL55_02709 NZ_KK316828.1 Protein Homology CDS 2935594 2936544 . - 0 ID=cds-WP_003900533.1;Parent=gene-AL55_RS18845;Dbxref=GenBank:WP_003900533.1;Name=WP_003900533.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217127.1;locus_tag=AL55_RS18845;product=phosphatidylinositol mannoside acyltransferase;protein_id=WP_003900533.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2936541 2937194 . - . ID=gene-AL55_RS18850;Name=pgsA1;gbkey=Gene;gene=pgsA1;gene_biotype=protein_coding;locus_tag=AL55_RS18850;old_locus_tag=AL55_02710 NZ_KK316828.1 Protein Homology CDS 2936541 2937194 . - 0 ID=cds-WP_003413482.1;Parent=gene-AL55_RS18850;Dbxref=GenBank:WP_003413482.1;Name=WP_003413482.1;gbkey=CDS;gene=pgsA1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177894.1;locus_tag=AL55_RS18850;product=phosphatidylinositol phosphate synthase;protein_id=WP_003413482.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2937191 2937778 . - . ID=gene-AL55_RS18855;Name=AL55_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18855;old_locus_tag=AL55_02711 NZ_KK316828.1 Protein Homology CDS 2937191 2937778 . - 0 ID=cds-WP_003413484.1;Parent=gene-AL55_RS18855;Dbxref=GenBank:WP_003413484.1;Name=WP_003413484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217129.1;locus_tag=AL55_RS18855;product=ATP adenylyltransferase;protein_id=WP_003413484.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2937771 2939849 . - . ID=gene-AL55_RS18860;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AL55_RS18860;old_locus_tag=AL55_02712 NZ_KK316828.1 Protein Homology CDS 2937771 2939849 . - 0 ID=cds-WP_003413486.1;Parent=gene-AL55_RS18860;Dbxref=GenBank:WP_003413486.1;Name=WP_003413486.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217130.1;locus_tag=AL55_RS18860;product=threonine--tRNA ligase;protein_id=WP_003413486.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2939958 2940185 . + . ID=gene-AL55_RS18865;Name=AL55_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18865;old_locus_tag=AL55_02713 NZ_KK316828.1 Protein Homology CDS 2939958 2940185 . + 0 ID=cds-WP_003413487.1;Parent=gene-AL55_RS18865;Dbxref=GenBank:WP_003413487.1;Name=WP_003413487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177674.1;locus_tag=AL55_RS18865;product=hypothetical protein;protein_id=WP_003413487.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2940182 2941568 . - . ID=gene-AL55_RS0105230;Name=AL55_RS0105230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0105230;old_locus_tag=AL55_02714;pseudo=true NZ_KK316828.1 Protein Homology CDS 2940182 2941568 . - 0 ID=cds-AL55_RS0105230;Parent=gene-AL55_RS0105230;Note=frameshifted;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177895.1;locus_tag=AL55_RS0105230;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2941913 2942413 . + . ID=gene-AL55_RS18870;Name=AL55_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18870;old_locus_tag=AL55_02715 NZ_KK316828.1 Protein Homology CDS 2941913 2942413 . + 0 ID=cds-WP_003413569.1;Parent=gene-AL55_RS18870;Dbxref=GenBank:WP_003413569.1;Name=WP_003413569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217132.1;locus_tag=AL55_RS18870;product=DUF1990 domain-containing protein;protein_id=WP_003413569.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2942430 2942870 . - . ID=gene-AL55_RS18875;Name=AL55_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18875;old_locus_tag=AL55_02716 NZ_KK316828.1 Protein Homology CDS 2942430 2942870 . - 0 ID=cds-WP_003413574.1;Parent=gene-AL55_RS18875;Dbxref=GenBank:WP_003413574.1;Name=WP_003413574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217133.1;locus_tag=AL55_RS18875;product=Rv2617c family stress response/phage resistance protein;protein_id=WP_003413574.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2942966 2943694 . + . ID=gene-AL55_RS18880;Name=AL55_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18880;old_locus_tag=AL55_02717 NZ_KK316828.1 Protein Homology CDS 2942966 2943694 . + 0 ID=cds-WP_003902320.1;Parent=gene-AL55_RS18880;Dbxref=GenBank:WP_003902320.1;Name=WP_003902320.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902320.1;locus_tag=AL55_RS18880;product=helix-turn-helix transcriptional regulator;protein_id=WP_003902320.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2943679 2944032 . - . ID=gene-AL55_RS18885;Name=AL55_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18885;old_locus_tag=AL55_02718 NZ_KK316828.1 Protein Homology CDS 2943679 2944032 . - 0 ID=cds-WP_003413583.1;Parent=gene-AL55_RS18885;Dbxref=GenBank:WP_003413583.1;Name=WP_003413583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217135.1;locus_tag=AL55_RS18885;product=cupin domain-containing protein;protein_id=WP_003413583.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2944045 2944470 . - . ID=gene-AL55_RS18890;Name=AL55_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18890;old_locus_tag=AL55_02719 NZ_KK316828.1 Protein Homology CDS 2944045 2944470 . - 0 ID=cds-WP_003413586.1;Parent=gene-AL55_RS18890;Dbxref=GenBank:WP_003413586.1;Name=WP_003413586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217136.1;locus_tag=AL55_RS18890;product=hypothetical protein;protein_id=WP_003413586.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2944467 2945141 . - . ID=gene-AL55_RS18895;Name=AL55_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18895;old_locus_tag=AL55_02720 NZ_KK316828.1 Protein Homology CDS 2944467 2945141 . - 0 ID=cds-WP_003901438.1;Parent=gene-AL55_RS18895;Dbxref=GenBank:WP_003901438.1;Name=WP_003901438.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217137.1;locus_tag=AL55_RS18895;product=helix-turn-helix transcriptional regulator;protein_id=WP_003901438.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2945219 2946040 . + . ID=gene-AL55_RS18900;Name=AL55_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18900;old_locus_tag=AL55_02721 NZ_KK316828.1 Protein Homology CDS 2945219 2946040 . + 0 ID=cds-WP_003413589.1;Parent=gene-AL55_RS18900;Dbxref=GenBank:WP_003413589.1;Name=WP_003413589.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217138.1;locus_tag=AL55_RS18900;product=class I SAM-dependent methyltransferase;protein_id=WP_003413589.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2946176 2947069 . + . ID=gene-AL55_RS18905;Name=AL55_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18905;old_locus_tag=AL55_02722 NZ_KK316828.1 Protein Homology CDS 2946176 2947069 . + 0 ID=cds-WP_003413592.1;Parent=gene-AL55_RS18905;Dbxref=GenBank:WP_003413592.1;Name=WP_003413592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217139.1;locus_tag=AL55_RS18905;product=universal stress protein TB31.7;protein_id=WP_003413592.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2947072 2947837 . - . ID=gene-AL55_RS18910;Name=AL55_RS18910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS18910;old_locus_tag=AL55_02723;pseudo=true NZ_KK316828.1 Protein Homology CDS 2947072 2947837 . - 0 ID=cds-AL55_RS18910;Parent=gene-AL55_RS18910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899400.1;locus_tag=AL55_RS18910;product=universal stress protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2947876 2949057 . - . ID=gene-AL55_RS18915;Name=AL55_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18915;old_locus_tag=AL55_02724 NZ_KK316828.1 Protein Homology CDS 2947876 2949057 . - 0 ID=cds-WP_003899401.1;Parent=gene-AL55_RS18915;Dbxref=GenBank:WP_003899401.1;Name=WP_003899401.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217141.1;locus_tag=AL55_RS18915;product=site-2 protease family protein;protein_id=WP_003899401.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2949116 2949547 . - . ID=gene-AL55_RS18920;Name=hrp1;gbkey=Gene;gene=hrp1;gene_biotype=protein_coding;locus_tag=AL55_RS18920;old_locus_tag=AL55_02725 NZ_KK316828.1 Protein Homology CDS 2949116 2949547 . - 0 ID=cds-WP_003413598.1;Parent=gene-AL55_RS18920;Dbxref=GenBank:WP_003413598.1;Name=WP_003413598.1;gbkey=CDS;gene=hrp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217142.1;locus_tag=AL55_RS18920;product=hypoxic response protein Hrp1;protein_id=WP_003413598.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2950061 2951302 . - . ID=gene-AL55_RS18925;Name=AL55_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18925;old_locus_tag=AL55_02726 NZ_KK316828.1 Protein Homology CDS 2950061 2951302 . - 0 ID=cds-WP_003899402.1;Parent=gene-AL55_RS18925;Dbxref=GenBank:WP_003899402.1;Name=WP_003899402.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217143.1;locus_tag=AL55_RS18925;product=alpha/beta hydrolase family protein;protein_id=WP_003899402.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2951720 2951974 . + . ID=gene-AL55_RS0105240;Name=AL55_RS0105240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105240;old_locus_tag=AL55_02727 NZ_KK316828.1 Protein Homology CDS 2951720 2951974 . + 0 ID=cds-WP_023637464.1;Parent=gene-AL55_RS0105240;Dbxref=GenBank:WP_023637464.1;Name=WP_023637464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303543.1;locus_tag=AL55_RS0105240;product=hypothetical protein;protein_id=WP_023637464.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2952321 2953445 . + . ID=gene-AL55_RS18930;Name=AL55_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18930;old_locus_tag=AL55_02728 NZ_KK316828.1 Protein Homology CDS 2952321 2953445 . + 0 ID=cds-WP_003902322.1;Parent=gene-AL55_RS18930;Dbxref=GenBank:WP_003902322.1;Name=WP_003902322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217145.1;locus_tag=AL55_RS18930;product=Rv2629 family ribosome hibernation factor;protein_id=WP_003902322.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2953447 2953986 . + . ID=gene-AL55_RS18935;Name=AL55_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18935;old_locus_tag=AL55_02729 NZ_KK316828.1 Protein Homology CDS 2953447 2953986 . + 0 ID=cds-WP_003413614.1;Parent=gene-AL55_RS18935;Dbxref=GenBank:WP_003413614.1;Name=WP_003413614.1;Ontology_term=GO:0006388,GO:0046872,GO:0072669;gbkey=CDS;go_component=tRNA-splicing ligase complex|0072669||IEA;go_function=metal ion binding|0046872||IEA;go_process=tRNA splicing%2C via endonucleolytic cleavage and ligation|0006388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217146.1;locus_tag=AL55_RS18935;product=archease;protein_id=WP_003413614.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2954002 2955424 . + . ID=gene-AL55_RS18940;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=pseudogene;locus_tag=AL55_RS18940;old_locus_tag=AL55_02730;pseudo=true NZ_KK316828.1 Protein Homology CDS 2954002 2955424 . + 0 ID=cds-AL55_RS18940;Parent=gene-AL55_RS18940;Note=frameshifted;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351416.1;locus_tag=AL55_RS18940;product=RNA-splicing ligase RtcB;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2955463 2955744 . - . ID=gene-AL55_RS18945;Name=AL55_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18945;old_locus_tag=AL55_02731 NZ_KK316828.1 Protein Homology CDS 2955463 2955744 . - 0 ID=cds-WP_003413619.1;Parent=gene-AL55_RS18945;Dbxref=GenBank:WP_003413619.1;Name=WP_003413619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217148.1;locus_tag=AL55_RS18945;product=DUF1876 domain-containing protein;protein_id=WP_003413619.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2955889 2956374 . - . ID=gene-AL55_RS18950;Name=AL55_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18950;old_locus_tag=AL55_02732 NZ_KK316828.1 Protein Homology CDS 2955889 2956374 . - 0 ID=cds-WP_003413625.1;Parent=gene-AL55_RS18950;Dbxref=GenBank:WP_003413625.1;Name=WP_003413625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217149.1;locus_tag=AL55_RS18950;product=non-heme di-iron catalase;protein_id=WP_003413625.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2956401 2956655 . - . ID=gene-AL55_RS26315;Name=AL55_RS26315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26315 NZ_KK316828.1 Protein Homology CDS 2956401 2956655 . - 0 ID=cds-WP_003908019.1;Parent=gene-AL55_RS26315;Dbxref=GenBank:WP_003908019.1;Name=WP_003908019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908019.1;locus_tag=AL55_RS26315;product=hypothetical protein;protein_id=WP_003908019.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2956659 2958995 . - . ID=gene-AL55_RS18955;Name=AL55_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18955;old_locus_tag=AL55_02733 NZ_KK316828.1 Protein Homology CDS 2956659 2958995 . - 0 ID=cds-WP_009938544.1;Parent=gene-AL55_RS18955;Dbxref=GenBank:WP_009938544.1;Name=WP_009938544.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177896.1;locus_tag=AL55_RS18955;product=PE family protein;protein_id=WP_009938544.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2959024 2959266 . + . ID=gene-AL55_RS18960;Name=AL55_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18960;old_locus_tag=AL55_02734 NZ_KK316828.1 Protein Homology CDS 2959024 2959266 . + 0 ID=cds-WP_031721595.1;Parent=gene-AL55_RS18960;Dbxref=GenBank:WP_031721595.1;Name=WP_031721595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217151.1;locus_tag=AL55_RS18960;product=hypothetical protein;protein_id=WP_031721595.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2959267 2959944 . + . ID=gene-AL55_RS18965;Name=AL55_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18965;old_locus_tag=AL55_02735 NZ_KK316828.1 Protein Homology CDS 2959267 2959944 . + 0 ID=cds-WP_003899406.1;Parent=gene-AL55_RS18965;Dbxref=GenBank:WP_003899406.1;Name=WP_003899406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217152.1;locus_tag=AL55_RS18965;product=phosphotransferase-like protein;protein_id=WP_003899406.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2960140 2960796 . + . ID=gene-AL55_RS18970;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=AL55_RS18970;old_locus_tag=AL55_02736 NZ_KK316828.1 Protein Homology CDS 2960140 2960796 . + 0 ID=cds-WP_003413654.1;Parent=gene-AL55_RS18970;Dbxref=GenBank:WP_003413654.1;Name=WP_003413654.1;Ontology_term=GO:0016020;gbkey=CDS;gene=dedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217153.1;locus_tag=AL55_RS18970;product=DedA family protein;protein_id=WP_003413654.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2960959 2961405 . + . ID=gene-AL55_RS18975;Name=AL55_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18975;old_locus_tag=AL55_02737 NZ_KK316828.1 Protein Homology CDS 2960959 2961405 . + 0 ID=cds-WP_003413657.1;Parent=gene-AL55_RS18975;Dbxref=GenBank:WP_003413657.1;Name=WP_003413657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217154.1;locus_tag=AL55_RS18975;product=anti-sigma factor antagonist;protein_id=WP_003413657.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2961580 2961912 . - . ID=gene-AL55_RS18980;Name=AL55_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18980;old_locus_tag=AL55_02738 NZ_KK316828.1 Protein Homology CDS 2961580 2961912 . - 0 ID=cds-WP_003413663.1;Parent=gene-AL55_RS18980;Dbxref=GenBank:WP_003413663.1;Name=WP_003413663.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217155.1;locus_tag=AL55_RS18980;product=YnfA family protein;protein_id=WP_003413663.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2962032 2962391 . - . ID=gene-AL55_RS18985;Name=AL55_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18985;old_locus_tag=AL55_02739 NZ_KK316828.1 Protein Homology CDS 2962032 2962391 . - 0 ID=cds-WP_003413665.1;Parent=gene-AL55_RS18985;Dbxref=GenBank:WP_003413665.1;Name=WP_003413665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217156.1;locus_tag=AL55_RS18985;product=Rv2640c family ArsR-like transcriptional regulator;protein_id=WP_003413665.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2962493 2962951 . + . ID=gene-AL55_RS18990;Name=cadI;gbkey=Gene;gene=cadI;gene_biotype=protein_coding;locus_tag=AL55_RS18990;old_locus_tag=AL55_02740 NZ_KK316828.1 Protein Homology CDS 2962493 2962951 . + 0 ID=cds-WP_003413675.1;Parent=gene-AL55_RS18990;Dbxref=GenBank:WP_003413675.1;Name=WP_003413675.1;gbkey=CDS;gene=cadI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217157.1;locus_tag=AL55_RS18990;product=cadmium-induced metalloenzyme CadI;protein_id=WP_003413675.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2963087 2963467 . + . ID=gene-AL55_RS18995;Name=AL55_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS18995;old_locus_tag=AL55_02741 NZ_KK316828.1 Protein Homology CDS 2963087 2963467 . + 0 ID=cds-WP_003899407.1;Parent=gene-AL55_RS18995;Dbxref=GenBank:WP_003899407.1;Name=WP_003899407.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217158.1;locus_tag=AL55_RS18995;product=ArsR/SmtB family transcription factor;protein_id=WP_003899407.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2963464 2964960 . + . ID=gene-AL55_RS19000;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=AL55_RS19000;old_locus_tag=AL55_02742 NZ_KK316828.1 Protein Homology CDS 2963464 2964960 . + 0 ID=cds-WP_003413686.1;Parent=gene-AL55_RS19000;Dbxref=GenBank:WP_003413686.1;Name=WP_003413686.1;Ontology_term=GO:0015700,GO:0046685,GO:0008490,GO:0015103,GO:0015297,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite secondary active transmembrane transporter activity|0008490||IEA,inorganic anion transmembrane transporter activity|0015103||IEA,antiporter activity|0015297||IEA;go_process=arsenite transport|0015700||IEA,response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217159.1;locus_tag=AL55_RS19000;product=ACR3 family arsenite efflux transporter;protein_id=WP_003413686.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2965195 2965386 . + . ID=gene-AL55_RS0105250;Name=AL55_RS0105250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105250 NZ_KK316828.1 Protein Homology CDS 2965195 2965386 . + 0 ID=cds-WP_003912823.1;Parent=gene-AL55_RS0105250;Dbxref=GenBank:WP_003912823.1;Name=WP_003912823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912823.1;locus_tag=AL55_RS0105250;product=antitoxin MazE family protein;protein_id=WP_003912823.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2965501 2965632 . + . ID=gene-AL55_RS28105;Name=AL55_RS28105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28105 NZ_KK316828.1 Protein Homology CDS 2965501 2965632 . + 0 ID=cds-WP_003413709.1;Parent=gene-AL55_RS28105;Dbxref=GenBank:WP_003413709.1;Name=WP_003413709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003413709.1;locus_tag=AL55_RS28105;product=hypothetical protein;protein_id=WP_003413709.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2966051 2966122 . - . ID=gene-AL55_RS19005;Name=AL55_RS19005;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS19005;old_locus_tag=AL55_02745 NZ_KK316828.1 tRNAscan-SE tRNA 2966051 2966122 . - . ID=rna-AL55_RS19005;Parent=gene-AL55_RS19005;anticodon=(pos:complement(2966088..2966090));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS19005;product=tRNA-Val NZ_KK316828.1 tRNAscan-SE exon 2966051 2966122 . - . ID=exon-AL55_RS19005-1;Parent=rna-AL55_RS19005;anticodon=(pos:complement(2966088..2966090));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS19005;product=tRNA-Val NZ_KK316828.1 RefSeq gene 2966307 2966379 . + . ID=gene-AL55_RS19010;Name=AL55_RS19010;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS19010;old_locus_tag=AL55_02746 NZ_KK316828.1 tRNAscan-SE tRNA 2966307 2966379 . + . ID=rna-AL55_RS19010;Parent=gene-AL55_RS19010;anticodon=(pos:2966340..2966342);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS19010;product=tRNA-Gly NZ_KK316828.1 tRNAscan-SE exon 2966307 2966379 . + . ID=exon-AL55_RS19010-1;Parent=rna-AL55_RS19010;anticodon=(pos:2966340..2966342);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS19010;product=tRNA-Gly NZ_KK316828.1 RefSeq gene 2966409 2966482 . + . ID=gene-AL55_RS19015;Name=AL55_RS19015;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS19015;old_locus_tag=AL55_02747 NZ_KK316828.1 tRNAscan-SE tRNA 2966409 2966482 . + . ID=rna-AL55_RS19015;Parent=gene-AL55_RS19015;anticodon=(pos:2966441..2966443);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS19015;product=tRNA-Cys NZ_KK316828.1 tRNAscan-SE exon 2966409 2966482 . + . ID=exon-AL55_RS19015-1;Parent=rna-AL55_RS19015;anticodon=(pos:2966441..2966443);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS19015;product=tRNA-Cys NZ_KK316828.1 RefSeq gene 2966496 2966570 . + . ID=gene-AL55_RS19020;Name=AL55_RS19020;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS19020;old_locus_tag=AL55_02748 NZ_KK316828.1 tRNAscan-SE tRNA 2966496 2966570 . + . ID=rna-AL55_RS19020;Parent=gene-AL55_RS19020;anticodon=(pos:2966528..2966530);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS19020;product=tRNA-Val NZ_KK316828.1 tRNAscan-SE exon 2966496 2966570 . + . ID=exon-AL55_RS19020-1;Parent=rna-AL55_RS19020;anticodon=(pos:2966528..2966530);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS19020;product=tRNA-Val NZ_KK316828.1 RefSeq gene 2966677 2967108 . + . ID=gene-AL55_RS19025;Name=AL55_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19025;old_locus_tag=AL55_02749 NZ_KK316828.1 Protein Homology CDS 2966677 2967108 . + 0 ID=cds-WP_003899409.1;Parent=gene-AL55_RS19025;Dbxref=GenBank:WP_003899409.1;Name=WP_003899409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217161.1;locus_tag=AL55_RS19025;product=hypothetical protein;protein_id=WP_003899409.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2967105 2968103 . + . ID=gene-AL55_RS19030;Name=AL55_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19030;old_locus_tag=AL55_02750 NZ_KK316828.1 Protein Homology CDS 2967105 2968103 . + 0 ID=cds-WP_003900538.1;Parent=gene-AL55_RS19030;Dbxref=GenBank:WP_003900538.1;Name=WP_003900538.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217162.1;locus_tag=AL55_RS19030;product=tyrosine-type recombinase/integrase;protein_id=WP_003900538.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2968117 2968581 . + . ID=gene-AL55_RS0105260;Name=AL55_RS0105260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105260;old_locus_tag=AL55_02751 NZ_KK316828.1 Protein Homology CDS 2968117 2968581 . + 0 ID=cds-WP_003900539.1;Parent=gene-AL55_RS0105260;Dbxref=GenBank:WP_003900539.1;Name=WP_003900539.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014273.6;locus_tag=AL55_RS0105260;product=ParB N-terminal domain-containing protein;protein_id=WP_003900539.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2968569 2968820 . + . ID=gene-AL55_RS0105265;Name=AL55_RS0105265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105265 NZ_KK316828.1 Protein Homology CDS 2968569 2968820 . + 0 ID=cds-WP_003908028.1;Parent=gene-AL55_RS0105265;Dbxref=GenBank:WP_003908028.1;Name=WP_003908028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487744.1;locus_tag=AL55_RS0105265;product=hypothetical protein;protein_id=WP_003908028.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2968991 2970430 . - . ID=gene-AL55_RS19035;Name=AL55_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19035;old_locus_tag=AL55_02752 NZ_KK316828.1 Protein Homology CDS 2968991 2970430 . - 0 ID=cds-WP_003901443.1;Parent=gene-AL55_RS19035;Dbxref=GenBank:WP_003901443.1;Name=WP_003901443.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217166.1;locus_tag=AL55_RS19035;product=phage major capsid protein;protein_id=WP_003901443.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2970438 2970971 . - . ID=gene-AL55_RS19040;Name=AL55_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19040;old_locus_tag=AL55_02753 NZ_KK316828.1 Protein Homology CDS 2970438 2970971 . - 0 ID=cds-WP_003899412.1;Parent=gene-AL55_RS19040;Dbxref=GenBank:WP_003899412.1;Name=WP_003899412.1;Ontology_term=GO:0019068,GO:0019082,GO:0005198,GO:0008233;gbkey=CDS;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA,viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217167.1;locus_tag=AL55_RS19040;product=HK97 family phage prohead protease;protein_id=WP_003899412.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2971124 2971615 . - . ID=gene-AL55_RS26325;Name=AL55_RS26325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26325;old_locus_tag=AL55_02754 NZ_KK316828.1 Protein Homology CDS 2971124 2971615 . - 0 ID=cds-WP_003900541.1;Parent=gene-AL55_RS26325;Dbxref=GenBank:WP_003900541.1;Name=WP_003900541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900541.1;locus_tag=AL55_RS26325;product=phage terminase small subunit P27 family;protein_id=WP_003900541.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2971782 2972105 . - . ID=gene-AL55_RS19045;Name=AL55_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19045;old_locus_tag=AL55_02755 NZ_KK316828.1 Protein Homology CDS 2971782 2972105 . - 0 ID=cds-WP_003899414.1;Parent=gene-AL55_RS19045;Dbxref=GenBank:WP_003899414.1;Name=WP_003899414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217169.1;locus_tag=AL55_RS19045;product=type II toxin-antitoxin system toxin;protein_id=WP_003899414.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2972185 2972430 . - . ID=gene-AL55_RS19050;Name=AL55_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19050;old_locus_tag=AL55_02756 NZ_KK316828.1 Protein Homology CDS 2972185 2972430 . - 0 ID=cds-WP_003899415.1;Parent=gene-AL55_RS19050;Dbxref=GenBank:WP_003899415.1;Name=WP_003899415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217170.1;locus_tag=AL55_RS19050;product=type II toxin-antitoxin system antitoxin;protein_id=WP_003899415.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2972427 2973854 . - . ID=gene-AL55_RS19055;Name=AL55_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19055;old_locus_tag=AL55_02757 NZ_KK316828.1 Protein Homology CDS 2972427 2973854 . - 0 ID=cds-WP_003899416.1;Parent=gene-AL55_RS19055;Dbxref=GenBank:WP_003899416.1;Name=WP_003899416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217171.1;locus_tag=AL55_RS19055;product=DUF3631 domain-containing protein;protein_id=WP_003899416.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2973856 2974248 . - . ID=gene-AL55_RS19060;Name=AL55_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19060;old_locus_tag=AL55_02758 NZ_KK316828.1 Protein Homology CDS 2973856 2974248 . - 0 ID=cds-WP_003899417.1;Parent=gene-AL55_RS19060;Dbxref=GenBank:WP_003899417.1;Name=WP_003899417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217172.1;locus_tag=AL55_RS19060;product=DUF2742 domain-containing protein;protein_id=WP_003899417.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2974245 2974505 . - . ID=gene-AL55_RS0105275;Name=AL55_RS0105275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105275;old_locus_tag=AL55_02759 NZ_KK316828.1 Protein Homology CDS 2974245 2974505 . - 0 ID=cds-WP_003899418.1;Parent=gene-AL55_RS0105275;Dbxref=GenBank:WP_003899418.1;Name=WP_003899418.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217173.1;locus_tag=AL55_RS0105275;product=helix-turn-helix domain-containing protein;protein_id=WP_003899418.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2974522 2974884 . - . ID=gene-AL55_RS19065;Name=AL55_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19065;old_locus_tag=AL55_02760 NZ_KK316828.1 Protein Homology CDS 2974522 2974884 . - 0 ID=cds-WP_003900543.1;Parent=gene-AL55_RS19065;Dbxref=GenBank:WP_003900543.1;Name=WP_003900543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217174.1;locus_tag=AL55_RS19065;product=hypothetical protein;protein_id=WP_003900543.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2974887 2976014 . - . ID=gene-AL55_RS19070;Name=AL55_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19070;old_locus_tag=AL55_02761 NZ_KK316828.1 Protein Homology CDS 2974887 2976014 . - 0 ID=cds-WP_003899420.1;Parent=gene-AL55_RS19070;Dbxref=GenBank:WP_003899420.1;Name=WP_003899420.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217175.1;locus_tag=AL55_RS19070;product=tyrosine-type recombinase/integrase;protein_id=WP_003899420.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2976159 2976386 . - . ID=gene-AL55_RS19075;Name=AL55_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19075;old_locus_tag=AL55_02762 NZ_KK316828.1 Protein Homology CDS 2976159 2976386 . - 0 ID=cds-WP_003899421.1;Parent=gene-AL55_RS19075;Dbxref=GenBank:WP_003899421.1;Name=WP_003899421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217176.1;locus_tag=AL55_RS19075;product=hypothetical protein;protein_id=WP_003899421.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2976383 2976772 . - . ID=gene-AL55_RS26330;Name=AL55_RS26330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26330;old_locus_tag=AL55_02763 NZ_KK316828.1 Protein Homology CDS 2976383 2976772 . - 0 ID=cds-WP_003899422.1;Parent=gene-AL55_RS26330;Dbxref=GenBank:WP_003899422.1;Name=WP_003899422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217177.1;locus_tag=AL55_RS26330;product=hypothetical protein;protein_id=WP_003899422.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2976678 2976950 . + . ID=gene-AL55_RS19080;Name=AL55_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19080;old_locus_tag=AL55_02764 NZ_KK316828.1 Protein Homology CDS 2976678 2976950 . + 0 ID=cds-WP_003900544.1;Parent=gene-AL55_RS19080;Dbxref=GenBank:WP_003900544.1;Name=WP_003900544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217178.1;locus_tag=AL55_RS19080;product=hypothetical protein;protein_id=WP_003900544.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2977049 2977282 . + . ID=gene-AL55_RS19085;Name=AL55_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19085;old_locus_tag=AL55_02765 NZ_KK316828.1 Protein Homology CDS 2977049 2977282 . + 0 ID=cds-WP_003413717.1;Parent=gene-AL55_RS19085;Dbxref=GenBank:WP_003413717.1;Name=WP_003413717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217179.1;locus_tag=AL55_RS19085;product=hypothetical protein;protein_id=WP_003413717.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2977293 2977547 . + . ID=gene-AL55_RS19090;Name=AL55_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19090;old_locus_tag=AL55_02766 NZ_KK316828.1 Protein Homology CDS 2977293 2977547 . + 0 ID=cds-WP_003413719.1;Parent=gene-AL55_RS19090;Dbxref=GenBank:WP_003413719.1;Name=WP_003413719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217180.1;locus_tag=AL55_RS19090;product=hypothetical protein;protein_id=WP_003413719.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2977895 2978176 . + . ID=gene-AL55_RS19095;Name=AL55_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19095;old_locus_tag=AL55_02767 NZ_KK316828.1 Protein Homology CDS 2977895 2978176 . + 0 ID=cds-WP_003899423.1;Parent=gene-AL55_RS19095;Dbxref=GenBank:WP_003899423.1;Name=WP_003899423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217181.1;locus_tag=AL55_RS19095;product=hypothetical protein;protein_id=WP_003899423.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 2978267 2979049 . + . ID=gene-AL55_RS19100;Name=AL55_RS19100;end_range=2979049,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS19100;old_locus_tag=AL55_02768;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 2978267 2979049 . + 0 ID=cds-AL55_RS19100;Parent=gene-AL55_RS19100;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2979049,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL55_RS19100;partial=true;product=IS256-like element IS1081 family transposase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 2979092 2979850 . + . ID=gene-AL55_RS19105;Name=AL55_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19105;old_locus_tag=AL55_02769 NZ_KK316828.1 Protein Homology CDS 2979092 2979850 . + 0 ID=cds-WP_003413845.1;Parent=gene-AL55_RS19105;Dbxref=GenBank:WP_003413845.1;Name=WP_003413845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177897.1;locus_tag=AL55_RS19105;product=Clp protease N-terminal domain-containing protein;protein_id=WP_003413845.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2979929 2980450 . + . ID=gene-AL55_RS19110;Name=AL55_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19110;old_locus_tag=AL55_02770 NZ_KK316828.1 Protein Homology CDS 2979929 2980450 . + 0 ID=cds-WP_003899425.1;Parent=gene-AL55_RS19110;Dbxref=GenBank:WP_003899425.1;Name=WP_003899425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217184.1;locus_tag=AL55_RS19110;product=hypothetical protein;protein_id=WP_003899425.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2980479 2980949 . + . ID=gene-AL55_RS19115;Name=AL55_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19115;old_locus_tag=AL55_02771 NZ_KK316828.1 Protein Homology CDS 2980479 2980949 . + 0 ID=cds-WP_003413852.1;Parent=gene-AL55_RS19115;Dbxref=GenBank:WP_003413852.1;Name=WP_003413852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217185.1;locus_tag=AL55_RS19115;product=GNAT family N-acetyltransferase;protein_id=WP_003413852.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2980927 2982036 . - . ID=gene-AL55_RS19120;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=AL55_RS19120;old_locus_tag=AL55_02772 NZ_KK316828.1 Protein Homology CDS 2980927 2982036 . - 0 ID=cds-WP_003899426.1;Parent=gene-AL55_RS19120;Dbxref=GenBank:WP_003899426.1;Name=WP_003899426.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217186.1;locus_tag=AL55_RS19120;product=cell division protein ZapE;protein_id=WP_003899426.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2982035 2982811 . + . ID=gene-AL55_RS19125;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AL55_RS19125;old_locus_tag=AL55_02773 NZ_KK316828.1 Protein Homology CDS 2982035 2982811 . + 0 ID=cds-WP_003413854.1;Parent=gene-AL55_RS19125;Dbxref=GenBank:WP_003413854.1;Name=WP_003413854.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217187.1;locus_tag=AL55_RS19125;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=WP_003413854.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2982878 2984464 . + . ID=gene-AL55_RS19130;Name=AL55_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19130;old_locus_tag=AL55_02774 NZ_KK316828.1 Protein Homology CDS 2982878 2984464 . + 0 ID=cds-WP_003413857.1;Parent=gene-AL55_RS19130;Dbxref=GenBank:WP_003413857.1;Name=WP_003413857.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217188.1;locus_tag=AL55_RS19130;product=alpha/beta hydrolase;protein_id=WP_003413857.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2984487 2985788 . + . ID=gene-AL55_RS19135;Name=aftC;gbkey=Gene;gene=aftC;gene_biotype=protein_coding;locus_tag=AL55_RS19135;old_locus_tag=AL55_02775 NZ_KK316828.1 Protein Homology CDS 2984487 2985788 . + 0 ID=cds-WP_003413860.1;Parent=gene-AL55_RS19135;Dbxref=GenBank:WP_003413860.1;Name=WP_003413860.1;gbkey=CDS;gene=aftC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217189.1;locus_tag=AL55_RS19135;product=arabinofuranan 3-O-arabinosyltransferase;protein_id=WP_003413860.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2985957 2986367 . + . ID=gene-AL55_RS19140;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=AL55_RS19140;old_locus_tag=AL55_02776 NZ_KK316828.1 Protein Homology CDS 2985957 2986367 . + 0 ID=cds-WP_031721885.1;Parent=gene-AL55_RS19140;Dbxref=GenBank:WP_031721885.1;Name=WP_031721885.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217190.1;locus_tag=AL55_RS19140;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_031721885.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2986435 2987187 . - . ID=gene-AL55_RS19145;Name=AL55_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19145;old_locus_tag=AL55_02777 NZ_KK316828.1 Protein Homology CDS 2986435 2987187 . - 0 ID=cds-WP_003413866.1;Parent=gene-AL55_RS19145;Dbxref=GenBank:WP_003413866.1;Name=WP_003413866.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217191.1;locus_tag=AL55_RS19145;product=class I SAM-dependent methyltransferase;protein_id=WP_003413866.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2987184 2987879 . - . ID=gene-AL55_RS19150;Name=hemQ;gbkey=Gene;gene=hemQ;gene_biotype=protein_coding;locus_tag=AL55_RS19150;old_locus_tag=AL55_02778 NZ_KK316828.1 Protein Homology CDS 2987184 2987879 . - 0 ID=cds-WP_003413869.1;Parent=gene-AL55_RS19150;Dbxref=GenBank:WP_003413869.1;Name=WP_003413869.1;gbkey=CDS;gene=hemQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217192.1;locus_tag=AL55_RS19150;product=hydrogen peroxide-dependent heme synthase;protein_id=WP_003413869.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2987885 2989243 . - . ID=gene-AL55_RS19155;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=AL55_RS19155;old_locus_tag=AL55_02779 NZ_KK316828.1 Protein Homology CDS 2987885 2989243 . - 0 ID=cds-WP_003413871.1;Parent=gene-AL55_RS19155;Dbxref=GenBank:WP_003413871.1;Name=WP_003413871.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=oxygen-dependent protoporphyrinogen oxidase activity|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177675.1;locus_tag=AL55_RS19155;product=protoporphyrinogen oxidase;protein_id=WP_003413871.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2989240 2990313 . - . ID=gene-AL55_RS19160;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AL55_RS19160;old_locus_tag=AL55_02780 NZ_KK316828.1 Protein Homology CDS 2989240 2990313 . - 0 ID=cds-WP_003413873.1;Parent=gene-AL55_RS19160;Dbxref=GenBank:WP_003413873.1;Name=WP_003413873.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217194.1;locus_tag=AL55_RS19160;product=uroporphyrinogen decarboxylase;protein_id=WP_003413873.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2990366 2991196 . + . ID=gene-AL55_RS19165;Name=AL55_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19165;old_locus_tag=AL55_02781 NZ_KK316828.1 Protein Homology CDS 2990366 2991196 . + 0 ID=cds-WP_003413876.1;Parent=gene-AL55_RS19165;Dbxref=GenBank:WP_003413876.1;Name=WP_003413876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217195.1;locus_tag=AL55_RS19165;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_003413876.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2991458 2992090 . + . ID=gene-AL55_RS19170;Name=AL55_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19170;old_locus_tag=AL55_02782 NZ_KK316828.1 Protein Homology CDS 2991458 2992090 . + 0 ID=cds-WP_003413879.1;Parent=gene-AL55_RS19170;Dbxref=GenBank:WP_003413879.1;Name=WP_003413879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217196.1;locus_tag=AL55_RS19170;product=DUF3000 domain-containing protein;protein_id=WP_003413879.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2992092 2993408 . + . ID=gene-AL55_RS19175;Name=AL55_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19175;old_locus_tag=AL55_02783 NZ_KK316828.1 Protein Homology CDS 2992092 2993408 . + 0 ID=cds-WP_003413889.1;Parent=gene-AL55_RS19175;Dbxref=GenBank:WP_003413889.1;Name=WP_003413889.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217197.1;locus_tag=AL55_RS19175;product=ribonuclease D;protein_id=WP_003413889.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2993405 2995321 . - . ID=gene-AL55_RS19180;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AL55_RS19180;old_locus_tag=AL55_02784 NZ_KK316828.1 Protein Homology CDS 2993405 2995321 . - 0 ID=cds-WP_003413891.1;Parent=gene-AL55_RS19180;Dbxref=GenBank:WP_003413891.1;Name=WP_003413891.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177898.1;locus_tag=AL55_RS19180;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_003413891.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2995519 2995962 . + . ID=gene-AL55_RS19185;Name=AL55_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19185;old_locus_tag=AL55_02785 NZ_KK316828.1 Protein Homology CDS 2995519 2995962 . + 0 ID=cds-WP_003912830.1;Parent=gene-AL55_RS19185;Dbxref=GenBank:WP_003912830.1;Name=WP_003912830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008258518.1;locus_tag=AL55_RS19185;product=CBS domain-containing protein;protein_id=WP_003912830.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2995967 2997256 . + . ID=gene-AL55_RS19190;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=AL55_RS19190;old_locus_tag=AL55_02786 NZ_KK316828.1 Protein Homology CDS 2995967 2997256 . + 0 ID=cds-WP_003413894.1;Parent=gene-AL55_RS19190;Dbxref=GenBank:WP_003413894.1;Name=WP_003413894.1;gbkey=CDS;gene=arsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217200.1;locus_tag=AL55_RS19190;product=ArsB/NhaD family transporter;protein_id=WP_003413894.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2997336 2998622 . + . ID=gene-AL55_RS19195;Name=AL55_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19195;old_locus_tag=AL55_02787 NZ_KK316828.1 Protein Homology CDS 2997336 2998622 . + 0 ID=cds-WP_003901451.1;Parent=gene-AL55_RS19195;Dbxref=GenBank:WP_003901451.1;Name=WP_003901451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177899.1;locus_tag=AL55_RS19195;product=ArsB/NhaD family transporter;protein_id=WP_003901451.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2998633 2999391 . - . ID=gene-AL55_RS19200;Name=AL55_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19200;old_locus_tag=AL55_02788 NZ_KK316828.1 Protein Homology CDS 2998633 2999391 . - 0 ID=cds-WP_003413897.1;Parent=gene-AL55_RS19200;Dbxref=GenBank:WP_003413897.1;Name=WP_003413897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217202.1;locus_tag=AL55_RS19200;product=fluoroquinolones efflux ABC transporter permease;protein_id=WP_003413897.1;transl_table=11 NZ_KK316828.1 RefSeq gene 2999388 3000101 . - . ID=gene-AL55_RS19205;Name=AL55_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19205;old_locus_tag=AL55_02789 NZ_KK316828.1 Protein Homology CDS 2999388 3000101 . - 0 ID=cds-WP_003413912.1;Parent=gene-AL55_RS19205;Dbxref=GenBank:WP_003413912.1;Name=WP_003413912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217203.1;locus_tag=AL55_RS19205;product=fluoroquinolone export ABC transporter permease subunit;protein_id=WP_003413912.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3000098 3001003 . - . ID=gene-AL55_RS19210;Name=AL55_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19210;old_locus_tag=AL55_02790 NZ_KK316828.1 Protein Homology CDS 3000098 3001003 . - 0 ID=cds-WP_003413913.1;Parent=gene-AL55_RS19210;Dbxref=GenBank:WP_003413913.1;Name=WP_003413913.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217204.1;locus_tag=AL55_RS19210;product=ABC transporter ATP-binding protein;protein_id=WP_003413913.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3001198 3002415 . - . ID=gene-AL55_RS19215;Name=AL55_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19215;old_locus_tag=AL55_02791 NZ_KK316828.1 Protein Homology CDS 3001198 3002415 . - 0 ID=cds-WP_003900550.1;Parent=gene-AL55_RS19215;Dbxref=GenBank:WP_003900550.1;Name=WP_003900550.1;Ontology_term=GO:0001510,GO:0008757,GO:0046872,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,metal ion binding|0046872||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217205.1;locus_tag=AL55_RS19215;product=class I SAM-dependent RNA methyltransferase;protein_id=WP_003900550.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3002589 3004562 . - . ID=gene-AL55_RS19220;Name=AL55_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19220;old_locus_tag=AL55_02792 NZ_KK316828.1 Protein Homology CDS 3002589 3004562 . - 0 ID=cds-WP_003899433.1;Parent=gene-AL55_RS19220;Dbxref=GenBank:WP_003899433.1;Name=WP_003899433.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217206.1;locus_tag=AL55_RS19220;product=APC family permease;protein_id=WP_003899433.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3004697 3005380 . + . ID=gene-AL55_RS19225;Name=ceoB;gbkey=Gene;gene=ceoB;gene_biotype=protein_coding;locus_tag=AL55_RS19225;old_locus_tag=AL55_02793 NZ_KK316828.1 Protein Homology CDS 3004697 3005380 . + 0 ID=cds-WP_003902336.1;Parent=gene-AL55_RS19225;Dbxref=GenBank:WP_003902336.1;Name=WP_003902336.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;gene=ceoB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177900.1;locus_tag=AL55_RS19225;product=potassium channel family protein;protein_id=WP_003902336.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3005377 3006039 . + . ID=gene-AL55_RS19230;Name=ceoC;gbkey=Gene;gene=ceoC;gene_biotype=protein_coding;locus_tag=AL55_RS19230;old_locus_tag=AL55_02794 NZ_KK316828.1 Protein Homology CDS 3005377 3006039 . + 0 ID=cds-WP_003413921.1;Parent=gene-AL55_RS19230;Dbxref=GenBank:WP_003413921.1;Name=WP_003413921.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;gene=ceoC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177901.1;locus_tag=AL55_RS19230;product=potassium channel family protein;protein_id=WP_003413921.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3006050 3006721 . - . ID=gene-AL55_RS19235;Name=AL55_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19235;old_locus_tag=AL55_02795 NZ_KK316828.1 Protein Homology CDS 3006050 3006721 . - 0 ID=cds-WP_003901452.1;Parent=gene-AL55_RS19235;Dbxref=GenBank:WP_003901452.1;Name=WP_003901452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217209.1;locus_tag=AL55_RS19235;product=DUF3159 domain-containing protein;protein_id=WP_003901452.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3006752 3007120 . - . ID=gene-AL55_RS19240;Name=AL55_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19240;old_locus_tag=AL55_02796 NZ_KK316828.1 Protein Homology CDS 3006752 3007120 . - 0 ID=cds-WP_003901453.1;Parent=gene-AL55_RS19240;Dbxref=GenBank:WP_003901453.1;Name=WP_003901453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217210.1;locus_tag=AL55_RS19240;product=OB-fold nucleic acid binding domain-containing protein;protein_id=WP_003901453.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3007269 3007976 . + . ID=gene-AL55_RS19245;Name=AL55_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19245;old_locus_tag=AL55_02797 NZ_KK316828.1 Protein Homology CDS 3007269 3007976 . + 0 ID=cds-WP_003413927.1;Parent=gene-AL55_RS19245;Dbxref=GenBank:WP_003413927.1;Name=WP_003413927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217211.1;locus_tag=AL55_RS19245;product=alpha/beta fold hydrolase;protein_id=WP_003413927.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3008182 3008961 . - . ID=gene-AL55_RS19250;Name=AL55_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19250;old_locus_tag=AL55_02798 NZ_KK316828.1 Protein Homology CDS 3008182 3008961 . - 0 ID=cds-WP_003413928.1;Parent=gene-AL55_RS19250;Dbxref=GenBank:WP_003413928.1;Name=WP_003413928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217212.1;locus_tag=AL55_RS19250;product=DUF3710 domain-containing protein;protein_id=WP_003413928.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3009036 3009500 . - . ID=gene-AL55_RS19255;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AL55_RS19255;old_locus_tag=AL55_02799 NZ_KK316828.1 Protein Homology CDS 3009036 3009500 . - 0 ID=cds-WP_003413930.1;Parent=gene-AL55_RS19255;Dbxref=GenBank:WP_003413930.1;Name=WP_003413930.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908085.1;locus_tag=AL55_RS19255;product=dUTP diphosphatase;protein_id=WP_003413930.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3009526 3010011 . + . ID=gene-AL55_RS19260;Name=AL55_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19260;old_locus_tag=AL55_02800 NZ_KK316828.1 Protein Homology CDS 3009526 3010011 . + 0 ID=cds-WP_003413931.1;Parent=gene-AL55_RS19260;Dbxref=GenBank:WP_003413931.1;Name=WP_003413931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217214.1;locus_tag=AL55_RS19260;product=DUF3093 domain-containing protein;protein_id=WP_003413931.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3010016 3010318 . - . ID=gene-AL55_RS19265;Name=AL55_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19265;old_locus_tag=AL55_02801 NZ_KK316828.1 Protein Homology CDS 3010016 3010318 . - 0 ID=cds-WP_003899437.1;Parent=gene-AL55_RS19265;Dbxref=GenBank:WP_003899437.1;Name=WP_003899437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217215.1;locus_tag=AL55_RS19265;product=DUF4193 domain-containing protein;protein_id=WP_003899437.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3010556 3011206 . + . ID=gene-AL55_RS19270;Name=cei;gbkey=Gene;gene=cei;gene_biotype=protein_coding;locus_tag=AL55_RS19270;old_locus_tag=AL55_02802 NZ_KK316828.1 Protein Homology CDS 3010556 3011206 . + 0 ID=cds-WP_003413937.1;Parent=gene-AL55_RS19270;Dbxref=GenBank:WP_003413937.1;Name=WP_003413937.1;gbkey=CDS;gene=cei;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217216.1;locus_tag=AL55_RS19270;product=envelope integrity protein Cei;protein_id=WP_003413937.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3011216 3012088 . - . ID=gene-AL55_RS19275;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=AL55_RS19275;old_locus_tag=AL55_02803 NZ_KK316828.1 Protein Homology CDS 3011216 3012088 . - 0 ID=cds-WP_003413939.1;Parent=gene-AL55_RS19275;Dbxref=GenBank:WP_003413939.1;Name=WP_003413939.1;gbkey=CDS;gene=suhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217217.1;locus_tag=AL55_RS19275;product=inositol-1-monophosphatase SuhB;protein_id=WP_003413939.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3012211 3013008 . + . ID=gene-AL55_RS19280;Name=ppgK;gbkey=Gene;gene=ppgK;gene_biotype=protein_coding;locus_tag=AL55_RS19280;old_locus_tag=AL55_02804 NZ_KK316828.1 Protein Homology CDS 3012211 3013008 . + 0 ID=cds-WP_003413941.1;Parent=gene-AL55_RS19280;Dbxref=GenBank:WP_003413941.1;Name=WP_003413941.1;Ontology_term=GO:0004340,GO:0047330;gbkey=CDS;gene=ppgK;go_function=glucokinase activity|0004340||IEA,polyphosphate-glucose phosphotransferase activity|0047330||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217218.1;locus_tag=AL55_RS19280;product=polyphosphate--glucose phosphotransferase;protein_id=WP_003413941.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3013188 3014774 . + . ID=gene-AL55_RS19285;Name=sigA;gbkey=Gene;gene=sigA;gene_biotype=protein_coding;locus_tag=AL55_RS19285;old_locus_tag=AL55_02805 NZ_KK316828.1 Protein Homology CDS 3013188 3014774 . + 0 ID=cds-WP_003413944.1;Parent=gene-AL55_RS19285;Dbxref=GenBank:WP_003413944.1;Name=WP_003413944.1;Ontology_term=GO:0006352,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=sigA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217219.1;locus_tag=AL55_RS19285;product=RNA polymerase sigma factor;protein_id=WP_003413944.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3014811 3015239 . + . ID=gene-AL55_RS19290;Name=AL55_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19290;old_locus_tag=AL55_02806 NZ_KK316828.1 Protein Homology CDS 3014811 3015239 . + 0 ID=cds-WP_003899440.1;Parent=gene-AL55_RS19290;Dbxref=GenBank:WP_003899440.1;Name=WP_003899440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217220.1;locus_tag=AL55_RS19290;product=RidA family protein;protein_id=WP_003899440.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3015167 3015556 . - . ID=gene-AL55_RS19295;Name=AL55_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19295;old_locus_tag=AL55_02807 NZ_KK316828.1 Protein Homology CDS 3015167 3015556 . - 0 ID=cds-WP_003413947.1;Parent=gene-AL55_RS19295;Dbxref=GenBank:WP_003413947.1;Name=WP_003413947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217221.1;locus_tag=AL55_RS19295;product=DUF952 domain-containing protein;protein_id=WP_003413947.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3015553 3015795 . - . ID=gene-AL55_RS26355;Name=AL55_RS26355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26355;old_locus_tag=AL55_02808 NZ_KK316828.1 Protein Homology CDS 3015553 3015795 . - 0 ID=cds-WP_049955294.1;Parent=gene-AL55_RS26355;Dbxref=GenBank:WP_049955294.1;Name=WP_049955294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217222.1;locus_tag=AL55_RS26355;product=hypothetical protein;protein_id=WP_049955294.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3015748 3015864 . + . ID=gene-AL55_RS28250;Name=AL55_RS28250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28250 NZ_KK316828.1 Protein Homology CDS 3015748 3015864 . + 0 ID=cds-WP_015456423.1;Parent=gene-AL55_RS28250;Dbxref=GenBank:WP_015456423.1;Name=WP_015456423.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048765.1;locus_tag=AL55_RS28250;product=DUF7455 domain-containing protein;protein_id=WP_015456423.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3015926 3016900 . + . ID=gene-AL55_RS19300;Name=AL55_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19300;old_locus_tag=AL55_02809 NZ_KK316828.1 Protein Homology CDS 3015926 3016900 . + 0 ID=cds-WP_003413953.1;Parent=gene-AL55_RS19300;Dbxref=GenBank:WP_003413953.1;Name=WP_003413953.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217223.1;locus_tag=AL55_RS19300;product=YihY/virulence factor BrkB family protein;protein_id=WP_003413953.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3016901 3017140 . - . ID=gene-AL55_RS19305;Name=AL55_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19305;old_locus_tag=AL55_02810 NZ_KK316828.1 Protein Homology CDS 3016901 3017140 . - 0 ID=cds-WP_003413954.1;Parent=gene-AL55_RS19305;Dbxref=GenBank:WP_003413954.1;Name=WP_003413954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008258553.1;locus_tag=AL55_RS19305;product=DUF3039 domain-containing protein;protein_id=WP_003413954.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3017192 3017629 . + . ID=gene-AL55_RS19310;Name=AL55_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19310;old_locus_tag=AL55_02811 NZ_KK316828.1 Protein Homology CDS 3017192 3017629 . + 0 ID=cds-WP_003910933.1;Parent=gene-AL55_RS19310;Dbxref=GenBank:WP_003910933.1;Name=WP_003910933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217225.1;locus_tag=AL55_RS19310;product=DUF3099 domain-containing protein;protein_id=WP_003910933.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3017805 3018776 . + . ID=gene-AL55_RS19315;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=AL55_RS19315;old_locus_tag=AL55_02812 NZ_KK316828.1 Protein Homology CDS 3017805 3018776 . + 0 ID=cds-WP_003413958.1;Parent=gene-AL55_RS19315;Dbxref=GenBank:WP_003413958.1;Name=WP_003413958.1;gbkey=CDS;gene=sigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217226.1;locus_tag=AL55_RS19315;product=sigma-70 family RNA polymerase sigma factor SigB;protein_id=WP_003413958.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3018909 3019601 . + . ID=gene-AL55_RS19320;Name=ideR;gbkey=Gene;gene=ideR;gene_biotype=protein_coding;locus_tag=AL55_RS19320;old_locus_tag=AL55_02813 NZ_KK316828.1 Protein Homology CDS 3018909 3019601 . + 0 ID=cds-WP_003413962.1;Parent=gene-AL55_RS19320;Dbxref=GenBank:WP_003413962.1;Name=WP_003413962.1;gbkey=CDS;gene=ideR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217227.1;locus_tag=AL55_RS19320;product=iron-dependent transcriptional regulator IdeR;protein_id=WP_003413962.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3019614 3020672 . - . ID=gene-AL55_RS19325;Name=AL55_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19325;old_locus_tag=AL55_02814 NZ_KK316828.1 Protein Homology CDS 3019614 3020672 . - 0 ID=cds-WP_003905914.1;Parent=gene-AL55_RS19325;Dbxref=GenBank:WP_003905914.1;Name=WP_003905914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217228.1;locus_tag=AL55_RS19325;product=DUF4192 domain-containing protein;protein_id=WP_003905914.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3020785 3022191 . + . ID=gene-AL55_RS19330;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=AL55_RS19330;old_locus_tag=AL55_02815 NZ_KK316828.1 Protein Homology CDS 3020785 3022191 . + 0 ID=cds-WP_003900556.1;Parent=gene-AL55_RS19330;Dbxref=GenBank:WP_003900556.1;Name=WP_003900556.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217229.1;locus_tag=AL55_RS19330;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_003900556.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3022409 3023383 . + . ID=gene-AL55_RS19335;Name=AL55_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19335;old_locus_tag=AL55_02816 NZ_KK316828.1 Protein Homology CDS 3022409 3023383 . + 0 ID=cds-WP_003901455.1;Parent=gene-AL55_RS19335;Dbxref=GenBank:WP_003901455.1;Name=WP_003901455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217230.1;locus_tag=AL55_RS19335;product=proteasome assembly chaperone family protein;protein_id=WP_003901455.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3023442 3024467 . + . ID=gene-AL55_RS19340;Name=AL55_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19340;old_locus_tag=AL55_02817 NZ_KK316828.1 Protein Homology CDS 3023442 3024467 . + 0 ID=cds-WP_003900558.1;Parent=gene-AL55_RS19340;Dbxref=GenBank:WP_003900558.1;Name=WP_003900558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217231.1;locus_tag=AL55_RS19340;product=alpha/beta fold hydrolase;protein_id=WP_003900558.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3024516 3025202 . + . ID=gene-AL55_RS19345;Name=AL55_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19345;old_locus_tag=AL55_02818 NZ_KK316828.1 Protein Homology CDS 3024516 3025202 . + 0 ID=cds-WP_003413971.1;Parent=gene-AL55_RS19345;Dbxref=GenBank:WP_003413971.1;Name=WP_003413971.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217232.1;locus_tag=AL55_RS19345;product=PhzF family phenazine biosynthesis protein;protein_id=WP_003413971.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3025211 3025705 . - . ID=gene-AL55_RS19350;Name=AL55_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19350;old_locus_tag=AL55_02819 NZ_KK316828.1 Protein Homology CDS 3025211 3025705 . - 0 ID=cds-WP_031695428.1;Parent=gene-AL55_RS19350;Dbxref=GenBank:WP_031695428.1;Name=WP_031695428.1;Ontology_term=GO:0020037,GO:0046872,GO:0062213;gbkey=CDS;go_function=heme binding|0020037||IEA,metal ion binding|0046872||IEA,peroxynitrite isomerase activity|0062213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217233.1;locus_tag=AL55_RS19350;product=peroxynitrite isomerase;protein_id=WP_031695428.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3025757 3026221 . - . ID=gene-AL55_RS19355;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=AL55_RS19355;old_locus_tag=AL55_02820 NZ_KK316828.1 Protein Homology CDS 3025757 3026221 . - 0 ID=cds-WP_003413973.1;Parent=gene-AL55_RS19355;Dbxref=GenBank:WP_003413973.1;Name=WP_003413973.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217234.1;locus_tag=AL55_RS19355;product=transcriptional regulator NrdR;protein_id=WP_003413973.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3026384 3026881 . - . ID=gene-AL55_RS19360;Name=chiZ;gbkey=Gene;gene=chiZ;gene_biotype=protein_coding;locus_tag=AL55_RS19360;old_locus_tag=AL55_02821 NZ_KK316828.1 Protein Homology CDS 3026384 3026881 . - 0 ID=cds-WP_003413974.1;Parent=gene-AL55_RS19360;Dbxref=GenBank:WP_003413974.1;Name=WP_003413974.1;gbkey=CDS;gene=chiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217235.1;locus_tag=AL55_RS19360;product=cell wall hydrolase ChiZ;protein_id=WP_003413974.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3027132 3027842 . + . ID=gene-AL55_RS19365;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=AL55_RS19365;old_locus_tag=AL55_02822 NZ_KK316828.1 Protein Homology CDS 3027132 3027842 . + 0 ID=cds-WP_003899448.1;Parent=gene-AL55_RS19365;Dbxref=GenBank:WP_003899448.1;Name=WP_003899448.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217236.2;locus_tag=AL55_RS19365;product=transcriptional repressor LexA;protein_id=WP_003899448.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3027864 3029963 . - . ID=gene-AL55_RS19370;Name=AL55_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19370;old_locus_tag=AL55_02823 NZ_KK316828.1 Protein Homology CDS 3027864 3029963 . - 0 ID=cds-WP_003900560.1;Parent=gene-AL55_RS19370;Dbxref=GenBank:WP_003900560.1;Name=WP_003900560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217237.1;locus_tag=AL55_RS19370;product=LGFP repeat-containing protein;protein_id=WP_003900560.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3029979 3030227 . + . ID=gene-AL55_RS19375;Name=AL55_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19375;old_locus_tag=AL55_02824 NZ_KK316828.1 Protein Homology CDS 3029979 3030227 . + 0 ID=cds-WP_003902343.1;Parent=gene-AL55_RS19375;Dbxref=GenBank:WP_003902343.1;Name=WP_003902343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217238.1;locus_tag=AL55_RS19375;product=hypothetical protein;protein_id=WP_003902343.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3030253 3031446 . + . ID=gene-AL55_RS19380;Name=AL55_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19380;old_locus_tag=AL55_02825 NZ_KK316828.1 Protein Homology CDS 3030253 3031446 . + 0 ID=cds-WP_003413979.1;Parent=gene-AL55_RS19380;Dbxref=GenBank:WP_003413979.1;Name=WP_003413979.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217239.1;locus_tag=AL55_RS19380;product=TerC/Alx family metal homeostasis membrane protein;protein_id=WP_003413979.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3031475 3032635 . - . ID=gene-AL55_RS19385;Name=AL55_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19385;old_locus_tag=AL55_02826 NZ_KK316828.1 Protein Homology CDS 3031475 3032635 . - 0 ID=cds-WP_003901456.1;Parent=gene-AL55_RS19385;Dbxref=GenBank:WP_003901456.1;Name=WP_003901456.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217240.1;locus_tag=AL55_RS19385;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003901456.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3032771 3034201 . - . ID=gene-AL55_RS19390;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=AL55_RS19390;old_locus_tag=AL55_02827 NZ_KK316828.1 Protein Homology CDS 3032771 3034201 . - 0 ID=cds-WP_003911950.1;Parent=gene-AL55_RS19390;Dbxref=GenBank:WP_003911950.1;Name=WP_003911950.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911950.1;locus_tag=AL55_RS19390;product=GTPase HflX;protein_id=WP_003911950.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3034275 3035144 . - . ID=gene-AL55_RS19395;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AL55_RS19395;old_locus_tag=AL55_02828 NZ_KK316828.1 Protein Homology CDS 3034275 3035144 . - 0 ID=cds-WP_003413987.1;Parent=gene-AL55_RS19395;Dbxref=GenBank:WP_003413987.1;Name=WP_003413987.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217242.1;locus_tag=AL55_RS19395;product=diaminopimelate epimerase;protein_id=WP_003413987.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3035169 3036113 . - . ID=gene-AL55_RS19400;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AL55_RS19400;old_locus_tag=AL55_02829 NZ_KK316828.1 Protein Homology CDS 3035169 3036113 . - 0 ID=cds-WP_003413989.1;Parent=gene-AL55_RS19400;Dbxref=GenBank:WP_003413989.1;Name=WP_003413989.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217243.1;locus_tag=AL55_RS19400;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_003413989.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3036110 3036805 . - . ID=gene-AL55_RS19405;Name=AL55_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19405;old_locus_tag=AL55_02830 NZ_KK316828.1 Protein Homology CDS 3036110 3036805 . - 0 ID=cds-WP_003899452.1;Parent=gene-AL55_RS19405;Dbxref=GenBank:WP_003899452.1;Name=WP_003899452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217244.1;locus_tag=AL55_RS19405;product=class III extradiol ring-cleavage dioxygenase family protein;protein_id=WP_003899452.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3036914 3037819 . - . ID=gene-AL55_RS19410;Name=AL55_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19410;old_locus_tag=AL55_02831 NZ_KK316828.1 Protein Homology CDS 3036914 3037819 . - 0 ID=cds-WP_003413995.1;Parent=gene-AL55_RS19410;Dbxref=GenBank:WP_003413995.1;Name=WP_003413995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217245.1;locus_tag=AL55_RS19410;product=DMT family transporter;protein_id=WP_003413995.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3037886 3038362 . + . ID=gene-AL55_RS19415;Name=AL55_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19415;old_locus_tag=AL55_02832 NZ_KK316828.1 Protein Homology CDS 3037886 3038362 . + 0 ID=cds-WP_003901458.1;Parent=gene-AL55_RS19415;Dbxref=GenBank:WP_003901458.1;Name=WP_003901458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217246.1;locus_tag=AL55_RS19415;product=hypothetical protein;protein_id=WP_003901458.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3038370 3039722 . + . ID=gene-AL55_RS19420;Name=AL55_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19420;old_locus_tag=AL55_02833 NZ_KK316828.1 Protein Homology CDS 3038370 3039722 . + 0 ID=cds-WP_003413997.1;Parent=gene-AL55_RS19420;Dbxref=GenBank:WP_003413997.1;Name=WP_003413997.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217247.1;locus_tag=AL55_RS19420;product=DUF349 domain-containing protein;protein_id=WP_003413997.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3039719 3040333 . - . ID=gene-AL55_RS19425;Name=AL55_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19425;old_locus_tag=AL55_02834 NZ_KK316828.1 Protein Homology CDS 3039719 3040333 . - 0 ID=cds-WP_003413999.1;Parent=gene-AL55_RS19425;Dbxref=GenBank:WP_003413999.1;Name=WP_003413999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217248.1;locus_tag=AL55_RS19425;product=Rv2732c family membrane protein;protein_id=WP_003413999.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3040330 3041868 . - . ID=gene-AL55_RS19430;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AL55_RS19430;old_locus_tag=AL55_02835 NZ_KK316828.1 Protein Homology CDS 3040330 3041868 . - 0 ID=cds-WP_003414001.1;Parent=gene-AL55_RS19430;Dbxref=GenBank:WP_003414001.1;Name=WP_003414001.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217249.1;locus_tag=AL55_RS19430;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_003414001.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3042165 3043019 . + . ID=gene-AL55_RS26365;Name=AL55_RS26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26365;old_locus_tag=AL55_02836 NZ_KK316828.1 Protein Homology CDS 3042165 3043019 . + 0 ID=cds-WP_003899455.1;Parent=gene-AL55_RS26365;Dbxref=GenBank:WP_003899455.1;Name=WP_003899455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217250.1;locus_tag=AL55_RS26365;product=DUF5131 family protein;protein_id=WP_003899455.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3042904 3043896 . - . ID=gene-AL55_RS19435;Name=AL55_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19435;old_locus_tag=AL55_02837 NZ_KK316828.1 Protein Homology CDS 3042904 3043896 . - 0 ID=cds-WP_003899456.1;Parent=gene-AL55_RS19435;Dbxref=GenBank:WP_003899456.1;Name=WP_003899456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217251.1;locus_tag=AL55_RS19435;product=three-Cys-motif partner protein TcmP;protein_id=WP_003899456.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3043906 3044430 . - . ID=gene-AL55_RS19440;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AL55_RS19440;old_locus_tag=AL55_02838 NZ_KK316828.1 Protein Homology CDS 3043906 3044430 . - 0 ID=cds-WP_003905919.1;Parent=gene-AL55_RS19440;Dbxref=GenBank:WP_003905919.1;Name=WP_003905919.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217252.1;locus_tag=AL55_RS19440;product=recombination regulator RecX;protein_id=WP_003905919.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3044396 3046768 . - . ID=gene-AL55_RS19445;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AL55_RS19445;old_locus_tag=AL55_02839 NZ_KK316828.1 Protein Homology CDS 3044396 3046768 . - 0 ID=cds-WP_003414006.1;Parent=gene-AL55_RS19445;Dbxref=GenBank:WP_003414006.1;Name=WP_003414006.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217253.1;locus_tag=AL55_RS19445;product=intein-containing recombinase RecA;protein_id=WP_003414006.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3046963 3047136 . + . ID=gene-AL55_RS19450;Name=AL55_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19450;old_locus_tag=AL55_02840 NZ_KK316828.1 Protein Homology CDS 3046963 3047136 . + 0 ID=cds-WP_003414008.1;Parent=gene-AL55_RS19450;Dbxref=GenBank:WP_003414008.1;Name=WP_003414008.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414008.1;locus_tag=AL55_RS19450;product=(2Fe-2S)-binding protein;protein_id=WP_003414008.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3047150 3047344 . - . ID=gene-AL55_RS19455;Name=AL55_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19455;old_locus_tag=AL55_02841 NZ_KK316828.1 Protein Homology CDS 3047150 3047344 . - 0 ID=cds-WP_031680673.1;Parent=gene-AL55_RS19455;Dbxref=GenBank:WP_031680673.1;Name=WP_031680673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019513025.1;locus_tag=AL55_RS19455;product=DUF3046 domain-containing protein;protein_id=WP_031680673.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3047367 3048533 . - . ID=gene-AL55_RS19460;Name=AL55_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19460;old_locus_tag=AL55_02842 NZ_KK316828.1 Protein Homology CDS 3047367 3048533 . - 0 ID=cds-WP_003901461.1;Parent=gene-AL55_RS19460;Dbxref=GenBank:WP_003901461.1;Name=WP_003901461.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217255.1;locus_tag=AL55_RS19460;product=glycosyltransferase;protein_id=WP_003901461.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3048577 3049026 . + . ID=gene-AL55_RS19465;Name=ephG;gbkey=Gene;gene=ephG;gene_biotype=protein_coding;locus_tag=AL55_RS19465;old_locus_tag=AL55_02843 NZ_KK316828.1 Protein Homology CDS 3048577 3049026 . + 0 ID=cds-WP_003414015.1;Parent=gene-AL55_RS19465;Dbxref=GenBank:WP_003414015.1;Name=WP_003414015.1;gbkey=CDS;gene=ephG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217256.1;locus_tag=AL55_RS19465;product=epoxide hydrolase;protein_id=WP_003414015.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3049258 3050826 . + . ID=gene-AL55_RS19470;Name=AL55_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19470;old_locus_tag=AL55_02844 NZ_KK316828.1 Protein Homology CDS 3049258 3050826 . + 0 ID=cds-WP_031695430.1;Parent=gene-AL55_RS19470;Dbxref=GenBank:WP_031695430.1;Name=WP_031695430.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177902.1;locus_tag=AL55_RS19470;product=PE family protein;protein_id=WP_031695430.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3050850 3051064 . - . ID=gene-AL55_RS27360;Name=AL55_RS27360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27360;pseudo=true NZ_KK316828.1 Protein Homology CDS 3050850 3051064 . - 0 ID=cds-AL55_RS27360;Parent=gene-AL55_RS27360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007172553.1;locus_tag=AL55_RS27360;product=DUF3046 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3051141 3051350 . + . ID=gene-AL55_RS27365;Name=AL55_RS27365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27365 NZ_KK316828.1 Protein Homology CDS 3051141 3051350 . + 0 ID=cds-WP_003918495.1;Parent=gene-AL55_RS27365;Dbxref=GenBank:WP_003918495.1;Name=WP_003918495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918495.1;locus_tag=AL55_RS27365;product=limonene-1%2C2-epoxide hydrolase family protein;protein_id=WP_003918495.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3051354 3051758 . + . ID=gene-AL55_RS27370;Name=AL55_RS27370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27370 NZ_KK316828.1 Protein Homology CDS 3051354 3051758 . + 0 ID=cds-WP_003912838.1;Parent=gene-AL55_RS27370;Dbxref=GenBank:WP_003912838.1;Name=WP_003912838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631471.1;locus_tag=AL55_RS27370;product=DUF5313 domain-containing protein;protein_id=WP_003912838.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3051755 3052567 . - . ID=gene-AL55_RS19480;Name=pspM;gbkey=Gene;gene=pspM;gene_biotype=protein_coding;locus_tag=AL55_RS19480;old_locus_tag=AL55_02846 NZ_KK316828.1 Protein Homology CDS 3051755 3052567 . - 0 ID=cds-WP_003414026.1;Parent=gene-AL55_RS19480;Dbxref=GenBank:WP_003414026.1;Name=WP_003414026.1;gbkey=CDS;gene=pspM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217259.1;locus_tag=AL55_RS19480;product=phage shock envelope stress response protein PspM;protein_id=WP_003414026.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3052586 3053398 . - . ID=gene-AL55_RS19485;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=AL55_RS19485;old_locus_tag=AL55_02847 NZ_KK316828.1 Protein Homology CDS 3052586 3053398 . - 0 ID=cds-WP_003414030.1;Parent=gene-AL55_RS19485;Dbxref=GenBank:WP_003414030.1;Name=WP_003414030.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177903.1;locus_tag=AL55_RS19485;product=phage shock protein PspA;protein_id=WP_003414030.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3053528 3053866 . - . ID=gene-AL55_RS19490;Name=clgR;gbkey=Gene;gene=clgR;gene_biotype=protein_coding;locus_tag=AL55_RS19490;old_locus_tag=AL55_02848 NZ_KK316828.1 Protein Homology CDS 3053528 3053866 . - 0 ID=cds-WP_003414032.1;Parent=gene-AL55_RS19490;Dbxref=GenBank:WP_003414032.1;Name=WP_003414032.1;gbkey=CDS;gene=clgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217261.1;locus_tag=AL55_RS19490;product=transcriptional regulator ClgR;protein_id=WP_003414032.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3053937 3054536 . - . ID=gene-AL55_RS19495;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AL55_RS19495;old_locus_tag=AL55_02849 NZ_KK316828.1 Protein Homology CDS 3053937 3054536 . - 0 ID=cds-WP_003911983.1;Parent=gene-AL55_RS19495;Dbxref=GenBank:WP_003911983.1;Name=WP_003911983.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911983.1;locus_tag=AL55_RS19495;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_003911983.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3054597 3055121 . + . ID=gene-AL55_RS19500;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=AL55_RS19500;old_locus_tag=AL55_02850 NZ_KK316828.1 Protein Homology CDS 3054597 3055121 . + 0 ID=cds-WP_003414037.1;Parent=gene-AL55_RS19500;Dbxref=GenBank:WP_003414037.1;Name=WP_003414037.1;Ontology_term=GO:0006526,GO:0008080;gbkey=CDS;gene=argA;go_function=N-acetyltransferase activity|0008080||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217263.1;locus_tag=AL55_RS19500;product=amino-acid N-acetyltransferase;protein_id=WP_003414037.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3055190 3057841 . - . ID=gene-AL55_RS19505;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=AL55_RS19505;old_locus_tag=AL55_02851 NZ_KK316828.1 Protein Homology CDS 3055190 3057841 . - 0 ID=cds-WP_003414040.1;Parent=gene-AL55_RS19505;Dbxref=GenBank:WP_003414040.1;Name=WP_003414040.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217264.1;locus_tag=AL55_RS19505;product=DNA translocase FtsK;protein_id=WP_003414040.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3057840 3058154 . + . ID=gene-AL55_RS19510;Name=AL55_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19510;old_locus_tag=AL55_02852 NZ_KK316828.1 Protein Homology CDS 3057840 3058154 . + 0 ID=cds-WP_003414042.1;Parent=gene-AL55_RS19510;Dbxref=GenBank:WP_003414042.1;Name=WP_003414042.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217265.1;locus_tag=AL55_RS19510;product=putative quinol monooxygenase;protein_id=WP_003414042.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3058151 3058969 . + . ID=gene-AL55_RS19515;Name=AL55_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19515;old_locus_tag=AL55_02853 NZ_KK316828.1 Protein Homology CDS 3058151 3058969 . + 0 ID=cds-WP_003414045.1;Parent=gene-AL55_RS19515;Dbxref=GenBank:WP_003414045.1;Name=WP_003414045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217266.1;locus_tag=AL55_RS19515;product=Rv2750 family mycofactocin-dependent SDR oxidoreductase;protein_id=WP_003414045.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3058973 3059863 . + . ID=gene-AL55_RS19520;Name=AL55_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19520;old_locus_tag=AL55_02854 NZ_KK316828.1 Protein Homology CDS 3058973 3059863 . + 0 ID=cds-WP_003899463.1;Parent=gene-AL55_RS19520;Dbxref=GenBank:WP_003899463.1;Name=WP_003899463.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217267.1;locus_tag=AL55_RS19520;product=class I SAM-dependent methyltransferase;protein_id=WP_003899463.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3059850 3061526 . - . ID=gene-AL55_RS19525;Name=rnj;gbkey=Gene;gene=rnj;gene_biotype=protein_coding;locus_tag=AL55_RS19525;old_locus_tag=AL55_02855 NZ_KK316828.1 Protein Homology CDS 3059850 3061526 . - 0 ID=cds-WP_003414049.1;Parent=gene-AL55_RS19525;Dbxref=GenBank:WP_003414049.1;Name=WP_003414049.1;gbkey=CDS;gene=rnj;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217268.1;locus_tag=AL55_RS19525;product=ribonuclease J;protein_id=WP_003414049.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3061557 3062459 . - . ID=gene-AL55_RS19530;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=AL55_RS19530;old_locus_tag=AL55_02856 NZ_KK316828.1 Protein Homology CDS 3061557 3062459 . - 0 ID=cds-WP_003900564.1;Parent=gene-AL55_RS19530;Dbxref=GenBank:WP_003900564.1;Name=WP_003900564.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217269.1;locus_tag=AL55_RS19530;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_003900564.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3062528 3063280 . - . ID=gene-AL55_RS19535;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;locus_tag=AL55_RS19535;old_locus_tag=AL55_02857 NZ_KK316828.1 Protein Homology CDS 3062528 3063280 . - 0 ID=cds-WP_003899465.1;Parent=gene-AL55_RS19535;Dbxref=GenBank:WP_003899465.1;Name=WP_003899465.1;Ontology_term=GO:0006231,GO:0050660,GO:0050797;gbkey=CDS;gene=thyX;go_function=flavin adenine dinucleotide binding|0050660||IEA,thymidylate synthase (FAD) activity|0050797||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217270.1;locus_tag=AL55_RS19535;product=FAD-dependent thymidylate synthase;protein_id=WP_003899465.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3063524 3063799 . - . ID=gene-AL55_RS19540;Name=AL55_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19540;old_locus_tag=AL55_02858 NZ_KK316828.1 Protein Homology CDS 3063524 3063799 . - 0 ID=cds-WP_003414055.1;Parent=gene-AL55_RS19540;Dbxref=GenBank:WP_003414055.1;Name=WP_003414055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293900.1;locus_tag=AL55_RS19540;product=restriction endonuclease subunit S domain-containing protein;protein_id=WP_003414055.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3063796 3065418 . - . ID=gene-AL55_RS19545;Name=hsdM;gbkey=Gene;gene=hsdM;gene_biotype=protein_coding;locus_tag=AL55_RS19545;old_locus_tag=AL55_02859 NZ_KK316828.1 Protein Homology CDS 3063796 3065418 . - 0 ID=cds-WP_003414057.1;Parent=gene-AL55_RS19545;Dbxref=GenBank:WP_003414057.1;Name=WP_003414057.1;gbkey=CDS;gene=hsdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217272.1;locus_tag=AL55_RS19545;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_003414057.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3065505 3065921 . - . ID=gene-AL55_RS19550;Name=vapC21;gbkey=Gene;gene=vapC21;gene_biotype=protein_coding;locus_tag=AL55_RS19550;old_locus_tag=AL55_02860 NZ_KK316828.1 Protein Homology CDS 3065505 3065921 . - 0 ID=cds-WP_003414059.1;Parent=gene-AL55_RS19550;Dbxref=GenBank:WP_003414059.1;Name=WP_003414059.1;gbkey=CDS;gene=vapC21;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217273.1;locus_tag=AL55_RS19550;product=type II toxin-antitoxin system toxin ribonuclease C21;protein_id=WP_003414059.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3065918 3066184 . - . ID=gene-AL55_RS19555;Name=AL55_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19555;old_locus_tag=AL55_02861 NZ_KK316828.1 Protein Homology CDS 3065918 3066184 . - 0 ID=cds-WP_003414061.1;Parent=gene-AL55_RS19555;Dbxref=GenBank:WP_003414061.1;Name=WP_003414061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217274.1;locus_tag=AL55_RS19555;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003414061.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3066210 3066605 . - . ID=gene-AL55_RS19560;Name=AL55_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19560;old_locus_tag=AL55_02862 NZ_KK316828.1 Protein Homology CDS 3066210 3066605 . - 0 ID=cds-WP_003414064.1;Parent=gene-AL55_RS19560;Dbxref=GenBank:WP_003414064.1;Name=WP_003414064.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217275.1;locus_tag=AL55_RS19560;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414064.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3066602 3066871 . - . ID=gene-AL55_RS19565;Name=AL55_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19565;old_locus_tag=AL55_02863 NZ_KK316828.1 Protein Homology CDS 3066602 3066871 . - 0 ID=cds-WP_003414066.1;Parent=gene-AL55_RS19565;Dbxref=GenBank:WP_003414066.1;Name=WP_003414066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217276.1;locus_tag=AL55_RS19565;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003414066.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3066881 3067975 . - . ID=gene-AL55_RS19570;Name=hsdS;gbkey=Gene;gene=hsdS;gene_biotype=protein_coding;locus_tag=AL55_RS19570;old_locus_tag=AL55_02864 NZ_KK316828.1 Protein Homology CDS 3066881 3067975 . - 0 ID=cds-WP_003414068.1;Parent=gene-AL55_RS19570;Dbxref=GenBank:WP_003414068.1;Name=WP_003414068.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;gene=hsdS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217277.1;locus_tag=AL55_RS19570;product=restriction endonuclease subunit S;protein_id=WP_003414068.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3067972 3068391 . - . ID=gene-AL55_RS19575;Name=AL55_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19575;old_locus_tag=AL55_02865 NZ_KK316828.1 Protein Homology CDS 3067972 3068391 . - 0 ID=cds-WP_003414070.1;Parent=gene-AL55_RS19575;Dbxref=GenBank:WP_003414070.1;Name=WP_003414070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217278.1;locus_tag=AL55_RS19575;product=winged helix DNA-binding domain-containing protein;protein_id=WP_003414070.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3068465 3068944 . - . ID=gene-AL55_RS19580;Name=dfrA;gbkey=Gene;gene=dfrA;gene_biotype=protein_coding;locus_tag=AL55_RS19580;old_locus_tag=AL55_02866 NZ_KK316828.1 Protein Homology CDS 3068465 3068944 . - 0 ID=cds-WP_003414073.1;Parent=gene-AL55_RS19580;Dbxref=GenBank:WP_003414073.1;Name=WP_003414073.1;Ontology_term=GO:0004146;gbkey=CDS;gene=dfrA;go_function=dihydrofolate reductase activity|0004146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217279.1;locus_tag=AL55_RS19580;product=dihydrofolate reductase;protein_id=WP_003414073.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3069015 3069815 . - . ID=gene-AL55_RS19585;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=AL55_RS19585;old_locus_tag=AL55_02867 NZ_KK316828.1 Protein Homology CDS 3069015 3069815 . - 0 ID=cds-WP_003911953.1;Parent=gene-AL55_RS19585;Dbxref=GenBank:WP_003911953.1;Name=WP_003911953.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875188.1;locus_tag=AL55_RS19585;product=thymidylate synthase;protein_id=WP_003911953.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3069971 3070708 . + . ID=gene-AL55_RS19590;Name=AL55_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19590;old_locus_tag=AL55_02868 NZ_KK316828.1 Protein Homology CDS 3069971 3070708 . + 0 ID=cds-WP_003414079.1;Parent=gene-AL55_RS19590;Dbxref=GenBank:WP_003414079.1;Name=WP_003414079.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217281.1;locus_tag=AL55_RS19590;product=dienelactone hydrolase family protein;protein_id=WP_003414079.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3070923 3071705 . - . ID=gene-AL55_RS19595;Name=AL55_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19595;old_locus_tag=AL55_02869 NZ_KK316828.1 Protein Homology CDS 3070923 3071705 . - 0 ID=cds-WP_003414081.1;Parent=gene-AL55_RS19595;Dbxref=GenBank:WP_003414081.1;Name=WP_003414081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177905.1;locus_tag=AL55_RS19595;product=SDR family oxidoreductase;protein_id=WP_003414081.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3071702 3072055 . - . ID=gene-AL55_RS26375;Name=AL55_RS26375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26375;old_locus_tag=AL55_02870 NZ_KK316828.1 Protein Homology CDS 3071702 3072055 . - 0 ID=cds-WP_003900567.1;Parent=gene-AL55_RS26375;Dbxref=GenBank:WP_003900567.1;Name=WP_003900567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217283.1;locus_tag=AL55_RS26375;product=hypothetical protein;protein_id=WP_003900567.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3071938 3072228 . - . ID=gene-AL55_RS27770;Name=AL55_RS27770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27770 NZ_KK316828.1 Protein Homology CDS 3071938 3072228 . - 0 ID=cds-WP_003899467.1;Parent=gene-AL55_RS27770;Dbxref=GenBank:WP_003899467.1;Name=WP_003899467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414083.1;locus_tag=AL55_RS27770;product=hypothetical protein;protein_id=WP_003899467.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3072229 3073413 . - . ID=gene-AL55_RS19600;Name=AL55_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19600;old_locus_tag=AL55_02871 NZ_KK316828.1 Protein Homology CDS 3072229 3073413 . - 0 ID=cds-WP_003900568.1;Parent=gene-AL55_RS19600;Dbxref=GenBank:WP_003900568.1;Name=WP_003900568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177906.1;locus_tag=AL55_RS19600;product=PPE family protein;protein_id=WP_003900568.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3073493 3074320 . - . ID=gene-AL55_RS19605;Name=AL55_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19605;old_locus_tag=AL55_02872 NZ_KK316828.1 Protein Homology CDS 3073493 3074320 . - 0 ID=cds-WP_003905925.1;Parent=gene-AL55_RS19605;Dbxref=GenBank:WP_003905925.1;Name=WP_003905925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177907.1;locus_tag=AL55_RS19605;product=PPE family protein%2C SVP subgroup;protein_id=WP_003905925.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3074644 3075792 . - . ID=gene-AL55_RS19610;Name=AL55_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19610;old_locus_tag=AL55_02873 NZ_KK316828.1 Protein Homology CDS 3074644 3075792 . - 0 ID=cds-WP_003414088.1;Parent=gene-AL55_RS19610;Dbxref=GenBank:WP_003414088.1;Name=WP_003414088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177677.1;locus_tag=AL55_RS19610;product=PPE family protein;protein_id=WP_003414088.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3075916 3076368 . - . ID=gene-AL55_RS19615;Name=AL55_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19615;old_locus_tag=AL55_02874 NZ_KK316828.1 Protein Homology CDS 3075916 3076368 . - 0 ID=cds-WP_003414091.1;Parent=gene-AL55_RS19615;Dbxref=GenBank:WP_003414091.1;Name=WP_003414091.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217287.1;locus_tag=AL55_RS19615;product=flavodoxin family protein;protein_id=WP_003414091.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3076454 3076927 . - . ID=gene-AL55_RS19620;Name=AL55_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19620;old_locus_tag=AL55_02875 NZ_KK316828.1 Protein Homology CDS 3076454 3076927 . - 0 ID=cds-WP_003414097.1;Parent=gene-AL55_RS19620;Dbxref=GenBank:WP_003414097.1;Name=WP_003414097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217288.1;locus_tag=AL55_RS19620;product=hypothetical protein;protein_id=WP_003414097.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3076939 3077676 . - . ID=gene-AL55_RS19625;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=AL55_RS19625;old_locus_tag=AL55_02876 NZ_KK316828.1 Protein Homology CDS 3076939 3077676 . - 0 ID=cds-WP_003414099.1;Parent=gene-AL55_RS19625;Dbxref=GenBank:WP_003414099.1;Name=WP_003414099.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217289.1;locus_tag=AL55_RS19625;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_003414099.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3077687 3078091 . - . ID=gene-AL55_RS19630;Name=AL55_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19630;old_locus_tag=AL55_02877 NZ_KK316828.1 Protein Homology CDS 3077687 3078091 . - 0 ID=cds-WP_003900570.1;Parent=gene-AL55_RS19630;Dbxref=GenBank:WP_003900570.1;Name=WP_003900570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217290.1;locus_tag=AL55_RS19630;product=hypothetical protein;protein_id=WP_003900570.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3078148 3078705 . + . ID=gene-AL55_RS19635;Name=AL55_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19635;old_locus_tag=AL55_02878 NZ_KK316828.1 Protein Homology CDS 3078148 3078705 . + 0 ID=cds-WP_003899472.1;Parent=gene-AL55_RS19635;Dbxref=GenBank:WP_003899472.1;Name=WP_003899472.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899472.1;locus_tag=AL55_RS19635;product=GNAT family N-acetyltransferase;protein_id=WP_003899472.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3078709 3079800 . - . ID=gene-AL55_RS19640;Name=AL55_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19640;old_locus_tag=AL55_02879 NZ_KK316828.1 Protein Homology CDS 3078709 3079800 . - 0 ID=cds-WP_003900572.1;Parent=gene-AL55_RS19640;Dbxref=GenBank:WP_003900572.1;Name=WP_003900572.1;Ontology_term=GO:0010181,GO:0016491,GO:0046872,GO:0051537;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900572.1;locus_tag=AL55_RS19640;product=PDR/VanB family oxidoreductase;protein_id=WP_003900572.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3079820 3080890 . - . ID=gene-AL55_RS19645;Name=AL55_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19645;old_locus_tag=AL55_02880 NZ_KK316828.1 Protein Homology CDS 3079820 3080890 . - 0 ID=cds-WP_003414107.1;Parent=gene-AL55_RS19645;Dbxref=GenBank:WP_003414107.1;Name=WP_003414107.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217293.1;locus_tag=AL55_RS19645;product=metal-dependent hydrolase;protein_id=WP_003414107.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3081048 3081518 . - . ID=gene-AL55_RS19650;Name=AL55_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19650;old_locus_tag=AL55_02881 NZ_KK316828.1 Protein Homology CDS 3081048 3081518 . - 0 ID=cds-WP_003899475.1;Parent=gene-AL55_RS19650;Dbxref=GenBank:WP_003899475.1;Name=WP_003899475.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217294.1;locus_tag=AL55_RS19650;product=SRPBCC family protein;protein_id=WP_003899475.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3081550 3082065 . - . ID=gene-AL55_RS19655;Name=AL55_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19655;old_locus_tag=AL55_02882 NZ_KK316828.1 Protein Homology CDS 3081550 3082065 . - 0 ID=cds-WP_009939105.1;Parent=gene-AL55_RS19655;Dbxref=GenBank:WP_009939105.1;Name=WP_009939105.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939105.1;locus_tag=AL55_RS19655;product=HTH-type transcriptional regulator AldR;protein_id=WP_009939105.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3082155 3083270 . + . ID=gene-AL55_RS19660;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=AL55_RS19660;old_locus_tag=AL55_02883 NZ_KK316828.1 Protein Homology CDS 3082155 3083270 . + 0 ID=cds-WP_003899477.1;Parent=gene-AL55_RS19660;Dbxref=GenBank:WP_003899477.1;Name=WP_003899477.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217296.1;locus_tag=AL55_RS19660;product=alanine dehydrogenase;protein_id=WP_003899477.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3083285 3084319 . - . ID=gene-AL55_RS19665;Name=AL55_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19665;old_locus_tag=AL55_02884 NZ_KK316828.1 Protein Homology CDS 3083285 3084319 . - 0 ID=cds-WP_003899478.1;Parent=gene-AL55_RS19665;Dbxref=GenBank:WP_003899478.1;Name=WP_003899478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217297.1;locus_tag=AL55_RS19665;product=nitronate monooxygenase;protein_id=WP_003899478.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3084380 3085696 . - . ID=gene-AL55_RS19670;Name=pepR;gbkey=Gene;gene=pepR;gene_biotype=protein_coding;locus_tag=AL55_RS19670;old_locus_tag=AL55_02885 NZ_KK316828.1 Protein Homology CDS 3084380 3085696 . - 0 ID=cds-WP_003414119.1;Parent=gene-AL55_RS19670;Dbxref=GenBank:WP_003414119.1;Name=WP_003414119.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=pepR;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217298.1;locus_tag=AL55_RS19670;product=M16 family metallopeptidase;protein_id=WP_003414119.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3085674 3087932 . - . ID=gene-AL55_RS19675;Name=gpsI;gbkey=Gene;gene=gpsI;gene_biotype=protein_coding;locus_tag=AL55_RS19675;old_locus_tag=AL55_02886 NZ_KK316828.1 Protein Homology CDS 3085674 3087932 . - 0 ID=cds-WP_003414124.1;Parent=gene-AL55_RS19675;Dbxref=GenBank:WP_003414124.1;Name=WP_003414124.1;Ontology_term=GO:0006396,GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=gpsI;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=RNA processing|0006396||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217299.1;locus_tag=AL55_RS19675;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_003414124.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3088286 3088801 . - . ID=gene-AL55_RS19680;Name=lppU;gbkey=Gene;gene=lppU;gene_biotype=protein_coding;locus_tag=AL55_RS19680;old_locus_tag=AL55_02887 NZ_KK316828.1 Protein Homology CDS 3088286 3088801 . - 0 ID=cds-WP_003899480.1;Parent=gene-AL55_RS19680;Dbxref=GenBank:WP_003899480.1;Name=WP_003899480.1;gbkey=CDS;gene=lppU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217300.1;locus_tag=AL55_RS19680;product=LppU family putative lipoprotein;protein_id=WP_003899480.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3088814 3089083 . - . ID=gene-AL55_RS19685;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AL55_RS19685;old_locus_tag=AL55_02888 NZ_KK316828.1 Protein Homology CDS 3088814 3089083 . - 0 ID=cds-WP_003414128.1;Parent=gene-AL55_RS19685;Dbxref=GenBank:WP_003414128.1;Name=WP_003414128.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011559497.1;locus_tag=AL55_RS19685;product=30S ribosomal protein S15;protein_id=WP_003414128.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3089240 3090214 . - . ID=gene-AL55_RS19690;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AL55_RS19690;old_locus_tag=AL55_02889 NZ_KK316828.1 Protein Homology CDS 3089240 3090214 . - 0 ID=cds-WP_003911989.1;Parent=gene-AL55_RS19690;Dbxref=GenBank:WP_003911989.1;Name=WP_003911989.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911989.1;locus_tag=AL55_RS19690;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_003911989.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3090446 3092209 . + . ID=gene-AL55_RS19695;Name=AL55_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19695;old_locus_tag=AL55_02890 NZ_KK316828.1 Protein Homology CDS 3090446 3092209 . + 0 ID=cds-WP_003414134.1;Parent=gene-AL55_RS19695;Dbxref=GenBank:WP_003414134.1;Name=WP_003414134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217303.1;locus_tag=AL55_RS19695;product=nucleotide-binding protein;protein_id=WP_003414134.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3092294 3092980 . + . ID=gene-AL55_RS19700;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=AL55_RS19700;old_locus_tag=AL55_02891 NZ_KK316828.1 Protein Homology CDS 3092294 3092980 . + 0 ID=cds-WP_003414136.1;Parent=gene-AL55_RS19700;Dbxref=GenBank:WP_003414136.1;Name=WP_003414136.1;gbkey=CDS;gene=mntR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217304.1;locus_tag=AL55_RS19700;product=manganese-binding transcriptional regulator MntR;protein_id=WP_003414136.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3093041 3094273 . - . ID=gene-AL55_RS19705;Name=AL55_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19705;old_locus_tag=AL55_02892 NZ_KK316828.1 Protein Homology CDS 3093041 3094273 . - 0 ID=cds-WP_003414139.1;Parent=gene-AL55_RS19705;Dbxref=GenBank:WP_003414139.1;Name=WP_003414139.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217305.1;locus_tag=AL55_RS19705;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003414139.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3094299 3095504 . - . ID=gene-AL55_RS19710;Name=AL55_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19710;old_locus_tag=AL55_02893 NZ_KK316828.1 Protein Homology CDS 3094299 3095504 . - 0 ID=cds-WP_003414142.1;Parent=gene-AL55_RS19710;Dbxref=GenBank:WP_003414142.1;Name=WP_003414142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217306.3;locus_tag=AL55_RS19710;product=lipid-transfer protein;protein_id=WP_003414142.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3095537 3096916 . - . ID=gene-AL55_RS19715;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AL55_RS19715;old_locus_tag=AL55_02894 NZ_KK316828.1 Protein Homology CDS 3095537 3096916 . - 0 ID=cds-WP_003899482.1;Parent=gene-AL55_RS19715;Dbxref=GenBank:WP_003899482.1;Name=WP_003899482.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217307.1;locus_tag=AL55_RS19715;product=IS607 family element RNA-guided endonuclease TnpB;protein_id=WP_003899482.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3096916 3097497 . - . ID=gene-AL55_RS19720;Name=AL55_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19720;old_locus_tag=AL55_02895 NZ_KK316828.1 Protein Homology CDS 3096916 3097497 . - 0 ID=cds-WP_003414146.1;Parent=gene-AL55_RS19720;Dbxref=GenBank:WP_003414146.1;Name=WP_003414146.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217308.1;locus_tag=AL55_RS19720;product=IS607-like element IS1602 family transposase;protein_id=WP_003414146.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3097699 3098595 . - . ID=gene-AL55_RS19725;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AL55_RS19725;old_locus_tag=AL55_02896 NZ_KK316828.1 Protein Homology CDS 3097699 3098595 . - 0 ID=cds-WP_003414147.1;Parent=gene-AL55_RS19725;Dbxref=GenBank:WP_003414147.1;Name=WP_003414147.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217309.1;locus_tag=AL55_RS19725;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_003414147.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3098592 3099275 . - . ID=gene-AL55_RS19730;Name=pptT;gbkey=Gene;gene=pptT;gene_biotype=protein_coding;locus_tag=AL55_RS19730;old_locus_tag=AL55_02897 NZ_KK316828.1 Protein Homology CDS 3098592 3099275 . - 0 ID=cds-WP_003414149.1;Parent=gene-AL55_RS19730;Dbxref=GenBank:WP_003414149.1;Name=WP_003414149.1;gbkey=CDS;gene=pptT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217310.1;locus_tag=AL55_RS19730;product=4'-phosphopantetheinyl transferase;protein_id=WP_003414149.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3099272 3100246 . - . ID=gene-AL55_RS19735;Name=AL55_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19735;old_locus_tag=AL55_02898 NZ_KK316828.1 Protein Homology CDS 3099272 3100246 . - 0 ID=cds-WP_003414151.1;Parent=gene-AL55_RS19735;Dbxref=GenBank:WP_003414151.1;Name=WP_003414151.1;Ontology_term=GO:0016787,GO:0042578,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217311.1;locus_tag=AL55_RS19735;product=metallophosphoesterase family protein;protein_id=WP_003414151.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3100391 3100954 . - . ID=gene-AL55_RS19740;Name=lppV;gbkey=Gene;gene=lppV;gene_biotype=protein_coding;locus_tag=AL55_RS19740;old_locus_tag=AL55_02899 NZ_KK316828.1 Protein Homology CDS 3100391 3100954 . - 0 ID=cds-WP_003900574.1;Parent=gene-AL55_RS19740;Dbxref=GenBank:WP_003900574.1;Name=WP_003900574.1;gbkey=CDS;gene=lppV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217312.1;locus_tag=AL55_RS19740;product=LppA family lipoprotein;protein_id=WP_003900574.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3100954 3102642 . - . ID=gene-AL55_RS19745;Name=AL55_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19745;old_locus_tag=AL55_02900 NZ_KK316828.1 Protein Homology CDS 3100954 3102642 . - 0 ID=cds-WP_003414155.1;Parent=gene-AL55_RS19745;Dbxref=GenBank:WP_003414155.1;Name=WP_003414155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217313.1;locus_tag=AL55_RS19745;product=alpha/beta hydrolase family protein;protein_id=WP_003414155.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3102646 3102972 . - . ID=gene-AL55_RS19750;Name=AL55_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19750;old_locus_tag=AL55_02901 NZ_KK316828.1 Protein Homology CDS 3102646 3102972 . - 0 ID=cds-WP_003414157.1;Parent=gene-AL55_RS19750;Dbxref=GenBank:WP_003414157.1;Name=WP_003414157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217314.1;locus_tag=AL55_RS19750;product=hypothetical protein;protein_id=WP_003414157.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3103145 3103732 . + . ID=gene-AL55_RS19755;Name=AL55_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19755;old_locus_tag=AL55_02902 NZ_KK316828.1 Protein Homology CDS 3103145 3103732 . + 0 ID=cds-WP_003914429.1;Parent=gene-AL55_RS19755;Dbxref=GenBank:WP_003914429.1;Name=WP_003914429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978043.1;locus_tag=AL55_RS19755;product=DUF3558 domain-containing protein;protein_id=WP_003914429.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3103751 3105400 . + . ID=gene-AL55_RS19760;Name=AL55_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19760;old_locus_tag=AL55_02903 NZ_KK316828.1 Protein Homology CDS 3103751 3105400 . + 0 ID=cds-WP_003899485.1;Parent=gene-AL55_RS19760;Dbxref=GenBank:WP_003899485.1;Name=WP_003899485.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217316.1;locus_tag=AL55_RS19760;product=CocE/NonD family hydrolase;protein_id=WP_003899485.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3105502 3105858 . - . ID=gene-AL55_RS19765;Name=mazF9;gbkey=Gene;gene=mazF9;gene_biotype=protein_coding;gene_synonym=mazF-mt1;locus_tag=AL55_RS19765;old_locus_tag=AL55_02904 NZ_KK316828.1 Protein Homology CDS 3105502 3105858 . - 0 ID=cds-WP_003414166.1;Parent=gene-AL55_RS19765;Dbxref=GenBank:WP_003414166.1;Name=WP_003414166.1;gbkey=CDS;gene=mazF9;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217317.1;locus_tag=AL55_RS19765;product=type II toxin-antitoxin system toxin endoribonuclease MazF9;protein_id=WP_003414166.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3105842 3106072 . - . ID=gene-AL55_RS19770;Name=mazE9;gbkey=Gene;gene=mazE9;gene_biotype=protein_coding;locus_tag=AL55_RS19770;old_locus_tag=AL55_02905 NZ_KK316828.1 Protein Homology CDS 3105842 3106072 . - 0 ID=cds-WP_003901465.1;Parent=gene-AL55_RS19770;Dbxref=GenBank:WP_003901465.1;Name=WP_003901465.1;gbkey=CDS;gene=mazE9;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411507.1;locus_tag=AL55_RS19770;product=type II toxin-antitoxin system antitoxin MazE9;protein_id=WP_003901465.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3106115 3107158 . - . ID=gene-AL55_RS19775;Name=AL55_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19775;old_locus_tag=AL55_02906 NZ_KK316828.1 Protein Homology CDS 3106115 3107158 . - 0 ID=cds-WP_003414172.1;Parent=gene-AL55_RS19775;Dbxref=GenBank:WP_003414172.1;Name=WP_003414172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217318.1;locus_tag=AL55_RS19775;product=DUF2293 domain-containing protein;protein_id=WP_003414172.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3107157 3107624 . + . ID=gene-AL55_RS27775;Name=AL55_RS27775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27775;old_locus_tag=AL55_02907 NZ_KK316828.1 Protein Homology CDS 3107157 3107624 . + 0 ID=cds-WP_003414177.1;Parent=gene-AL55_RS27775;Dbxref=GenBank:WP_003414177.1;Name=WP_003414177.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020265.6;locus_tag=AL55_RS27775;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_003414177.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3107800 3108054 . - . ID=gene-AL55_RS27375;Name=AL55_RS27375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27375 NZ_KK316828.1 GeneMarkS-2+ CDS 3107800 3108054 . - 0 ID=cds-WP_003917684.1;Parent=gene-AL55_RS27375;Dbxref=GenBank:WP_003917684.1;Name=WP_003917684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS27375;product=hypothetical protein;protein_id=WP_003917684.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3108202 3108606 . + . ID=gene-AL55_RS19785;Name=AL55_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19785;old_locus_tag=AL55_02909 NZ_KK316828.1 Protein Homology CDS 3108202 3108606 . + 0 ID=cds-WP_003414181.1;Parent=gene-AL55_RS19785;Dbxref=GenBank:WP_003414181.1;Name=WP_003414181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217321.1;locus_tag=AL55_RS19785;product=hypothetical protein;protein_id=WP_003414181.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3108603 3108794 . + . ID=gene-AL55_RS19790;Name=AL55_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19790;old_locus_tag=AL55_02910 NZ_KK316828.1 Protein Homology CDS 3108603 3108794 . + 0 ID=cds-WP_003414184.1;Parent=gene-AL55_RS19790;Dbxref=GenBank:WP_003414184.1;Name=WP_003414184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217322.1;locus_tag=AL55_RS19790;product=hypothetical protein;protein_id=WP_003414184.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3109011 3109295 . + . ID=gene-AL55_RS27780;Name=AL55_RS27780;end_range=3109295,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27780;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 3109011 3109295 . + 0 ID=cds-AL55_RS27780;Parent=gene-AL55_RS27780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3109295,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217321.1;locus_tag=AL55_RS27780;partial=true;product=integrase catalytic domain-containing protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3109320 3110147 . + . ID=gene-AL55_RS28110;Name=AL55_RS28110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28110;old_locus_tag=AL55_02911 NZ_KK316828.1 Protein Homology CDS 3109320 3110147 . + 0 ID=cds-WP_323755006.1;Parent=gene-AL55_RS28110;Dbxref=GenBank:WP_323755006.1;Name=WP_323755006.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0005524,GO:0016893,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,obsolete endonuclease activity%2C active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters|0016893||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: protein motif:HMM:NF012870.6;locus_tag=AL55_RS28110;product=integrase catalytic domain-containing protein;protein_id=WP_323755006.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3110381 3110638 . + . ID=gene-AL55_RS19800;Name=AL55_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19800;old_locus_tag=AL55_02912 NZ_KK316828.1 Protein Homology CDS 3110381 3110638 . + 0 ID=cds-WP_003899489.1;Parent=gene-AL55_RS19800;Dbxref=GenBank:WP_003899489.1;Name=WP_003899489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217324.1;locus_tag=AL55_RS19800;product=hypothetical protein;protein_id=WP_003899489.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3110743 3111054 . + . ID=gene-AL55_RS19805;Name=AL55_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19805;old_locus_tag=AL55_02913 NZ_KK316828.1 Protein Homology CDS 3110743 3111054 . + 0 ID=cds-WP_003414190.1;Parent=gene-AL55_RS19805;Dbxref=GenBank:WP_003414190.1;Name=WP_003414190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217325.1;locus_tag=AL55_RS19805;product=hypothetical protein;protein_id=WP_003414190.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3111076 3111315 . - . ID=gene-AL55_RS26380;Name=AL55_RS26380;end_range=3111315,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS26380;old_locus_tag=AL55_02914;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 3111076 3111315 . - 0 ID=cds-AL55_RS26380;Parent=gene-AL55_RS26380;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3111315,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017835819.1;locus_tag=AL55_RS26380;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3111474 3112082 . + . ID=gene-AL55_RS19810;Name=AL55_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19810;old_locus_tag=AL55_02915 NZ_KK316828.1 Protein Homology CDS 3111474 3112082 . + 0 ID=cds-WP_003414195.1;Parent=gene-AL55_RS19810;Dbxref=GenBank:WP_003414195.1;Name=WP_003414195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217327.1;locus_tag=AL55_RS19810;product=hypothetical protein;protein_id=WP_003414195.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3112153 3113562 . + . ID=gene-AL55_RS19815;Name=AL55_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19815;old_locus_tag=AL55_02916 NZ_KK316828.1 Protein Homology CDS 3112153 3113562 . + 0 ID=cds-WP_003414198.1;Parent=gene-AL55_RS19815;Dbxref=GenBank:WP_003414198.1;Name=WP_003414198.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217328.1;locus_tag=AL55_RS19815;product=DDE-type integrase/transposase/recombinase;protein_id=WP_003414198.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3113559 3114371 . + . ID=gene-AL55_RS19820;Name=AL55_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19820;old_locus_tag=AL55_02917 NZ_KK316828.1 Protein Homology CDS 3113559 3114371 . + 0 ID=cds-WP_003899491.1;Parent=gene-AL55_RS19820;Dbxref=GenBank:WP_003899491.1;Name=WP_003899491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217329.1;locus_tag=AL55_RS19820;product=ExeA family protein;protein_id=WP_003899491.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3115360 3116621 . + . ID=gene-AL55_RS19830;Name=AL55_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19830;old_locus_tag=AL55_02919 NZ_KK316828.1 Protein Homology CDS 3115360 3115648 . + 0 ID=cds-WP_087902221.1-10;Parent=gene-AL55_RS19830;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS19830;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 3115648 3116621 . + 2 ID=cds-WP_087902221.1-10;Parent=gene-AL55_RS19830;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS19830;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3116660 3117004 . - . ID=gene-AL55_RS19835;Name=csm4;gbkey=Gene;gene=csm4;gene_biotype=pseudogene;locus_tag=AL55_RS19835;old_locus_tag=AL55_02920;partial=true;pseudo=true;start_range=.,3116660 NZ_KK316828.1 Protein Homology CDS 3116660 3117004 . - 0 ID=cds-AL55_RS19835;Parent=gene-AL55_RS19835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0043571;gbkey=CDS;gene=csm4;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217336.1;locus_tag=AL55_RS19835;partial=true;product=type III-A CRISPR-associated RAMP protein Csm4;pseudo=true;start_range=.,3116660;transl_table=11 NZ_KK316828.1 RefSeq gene 3116985 3117695 . - . ID=gene-AL55_RS19840;Name=csm3;gbkey=Gene;gene=csm3;gene_biotype=protein_coding;locus_tag=AL55_RS19840;old_locus_tag=AL55_02921 NZ_KK316828.1 Protein Homology CDS 3116985 3117695 . - 0 ID=cds-WP_003414292.1;Parent=gene-AL55_RS19840;Dbxref=GenBank:WP_003414292.1;Name=WP_003414292.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm3;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217337.1;locus_tag=AL55_RS19840;product=type III-A CRISPR-associated RAMP protein Csm3;protein_id=WP_003414292.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3117705 3118079 . - . ID=gene-AL55_RS19845;Name=csm2;gbkey=Gene;gene=csm2;gene_biotype=protein_coding;locus_tag=AL55_RS19845;old_locus_tag=AL55_02922 NZ_KK316828.1 Protein Homology CDS 3117705 3118079 . - 0 ID=cds-WP_003414296.1;Parent=gene-AL55_RS19845;Dbxref=GenBank:WP_003414296.1;Name=WP_003414296.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm2;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217338.1;locus_tag=AL55_RS19845;product=type III-A CRISPR-associated protein Csm2;protein_id=WP_003414296.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3118076 3120514 . - . ID=gene-AL55_RS19850;Name=cas10;gbkey=Gene;gene=cas10;gene_biotype=protein_coding;locus_tag=AL55_RS19850;old_locus_tag=AL55_02923 NZ_KK316828.1 Protein Homology CDS 3118076 3120514 . - 0 ID=cds-WP_003900580.1;Parent=gene-AL55_RS19850;Dbxref=GenBank:WP_003900580.1;Name=WP_003900580.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas10;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217339.1;locus_tag=AL55_RS19850;product=type III-A CRISPR-associated protein Cas10/Csm1;protein_id=WP_003900580.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3120511 3121299 . - . ID=gene-AL55_RS19855;Name=cas6;gbkey=Gene;gene=cas6;gene_biotype=protein_coding;locus_tag=AL55_RS19855;old_locus_tag=AL55_02924 NZ_KK316828.1 Protein Homology CDS 3120511 3121299 . - 0 ID=cds-WP_003917092.1;Parent=gene-AL55_RS19855;Dbxref=GenBank:WP_003917092.1;Name=WP_003917092.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas6;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917092.1;locus_tag=AL55_RS19855;product=CRISPR-associated endoribonuclease Cas6;protein_id=WP_003917092.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3121633 3122178 . - . ID=gene-AL55_RS19860;Name=AL55_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19860;old_locus_tag=AL55_02925 NZ_KK316828.1 Protein Homology CDS 3121633 3122178 . - 0 ID=cds-WP_014584866.1;Parent=gene-AL55_RS19860;Dbxref=GenBank:WP_014584866.1;Name=WP_014584866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217344.1;locus_tag=AL55_RS19860;product=DUF1802 family protein;protein_id=WP_014584866.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3122450 3123334 . - . ID=gene-AL55_RS19865;Name=AL55_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19865;old_locus_tag=AL55_02926 NZ_KK316828.1 Protein Homology CDS 3122450 3123334 . - 0 ID=cds-WP_003414409.1;Parent=gene-AL55_RS19865;Dbxref=GenBank:WP_003414409.1;Name=WP_003414409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217342.1;locus_tag=AL55_RS19865;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_003414409.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3123337 3124224 . - . ID=gene-AL55_RS19870;Name=AL55_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19870;old_locus_tag=AL55_02927 NZ_KK316828.1 Protein Homology CDS 3123337 3124224 . - 0 ID=cds-WP_003414414.1;Parent=gene-AL55_RS19870;Dbxref=GenBank:WP_003414414.1;Name=WP_003414414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217343.1;locus_tag=AL55_RS19870;product=type IV toxin-antitoxin system AbiEi family antitoxin;protein_id=WP_003414414.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3124529 3125074 . - . ID=gene-AL55_RS19875;Name=AL55_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19875;old_locus_tag=AL55_02928 NZ_KK316828.1 Protein Homology CDS 3124529 3125074 . - 0 ID=cds-WP_003910939.1;Parent=gene-AL55_RS19875;Dbxref=GenBank:WP_003910939.1;Name=WP_003910939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217344.1;locus_tag=AL55_RS19875;product=DUF1802 family protein;protein_id=WP_003910939.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3125071 3125340 . - . ID=gene-AL55_RS19880;Name=AL55_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19880;old_locus_tag=AL55_02929 NZ_KK316828.1 Protein Homology CDS 3125071 3125340 . - 0 ID=cds-WP_003414489.1;Parent=gene-AL55_RS19880;Dbxref=GenBank:WP_003414489.1;Name=WP_003414489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411535.1;locus_tag=AL55_RS19880;product=DUF2277 domain-containing protein;protein_id=WP_003414489.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3125361 3125753 . - . ID=gene-AL55_RS19885;Name=AL55_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19885;old_locus_tag=AL55_02930 NZ_KK316828.1 Protein Homology CDS 3125361 3125753 . - 0 ID=cds-WP_003414492.1;Parent=gene-AL55_RS19885;Dbxref=GenBank:WP_003414492.1;Name=WP_003414492.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217345.1;locus_tag=AL55_RS19885;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414492.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3125750 3125965 . - . ID=gene-AL55_RS19890;Name=AL55_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19890;old_locus_tag=AL55_02931 NZ_KK316828.1 Protein Homology CDS 3125750 3125965 . - 0 ID=cds-WP_003414495.1;Parent=gene-AL55_RS19890;Dbxref=GenBank:WP_003414495.1;Name=WP_003414495.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217346.1;locus_tag=AL55_RS19890;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003414495.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3126012 3126761 . + . ID=gene-AL55_RS19895;Name=AL55_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19895;old_locus_tag=AL55_02932 NZ_KK316828.1 Protein Homology CDS 3126012 3126761 . + 0 ID=cds-WP_003902358.1;Parent=gene-AL55_RS19895;Dbxref=GenBank:WP_003902358.1;Name=WP_003902358.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217347.1;locus_tag=AL55_RS19895;product=enoyl-CoA hydratase;protein_id=WP_003902358.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3126840 3127922 . - . ID=gene-AL55_RS19900;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=AL55_RS19900;old_locus_tag=AL55_02933 NZ_KK316828.1 Protein Homology CDS 3126840 3127922 . - 0 ID=cds-WP_003414499.1;Parent=gene-AL55_RS19900;Dbxref=GenBank:WP_003414499.1;Name=WP_003414499.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217348.1;locus_tag=AL55_RS19900;product=ABC transporter ATP-binding protein;protein_id=WP_003414499.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3127915 3129225 . - . ID=gene-AL55_RS19905;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=AL55_RS19905;old_locus_tag=AL55_02934 NZ_KK316828.1 Protein Homology CDS 3127915 3129225 . - 0 ID=cds-WP_003414501.1;Parent=gene-AL55_RS19905;Dbxref=GenBank:WP_003414501.1;Name=WP_003414501.1;gbkey=CDS;gene=ugpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217349.1;locus_tag=AL55_RS19905;product=ABC transporter substrate-binding protein;protein_id=WP_003414501.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3129228 3130055 . - . ID=gene-AL55_RS19910;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=AL55_RS19910;old_locus_tag=AL55_02935 NZ_KK316828.1 Protein Homology CDS 3129228 3130055 . - 0 ID=cds-WP_003414504.1;Parent=gene-AL55_RS19910;Dbxref=GenBank:WP_003414504.1;Name=WP_003414504.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=ugpE;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217350.1;locus_tag=AL55_RS19910;product=carbohydrate ABC transporter permease;protein_id=WP_003414504.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3130052 3130963 . - . ID=gene-AL55_RS19915;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=AL55_RS19915;old_locus_tag=AL55_02936 NZ_KK316828.1 Protein Homology CDS 3130052 3130963 . - 0 ID=cds-WP_003414505.1;Parent=gene-AL55_RS19915;Dbxref=GenBank:WP_003414505.1;Name=WP_003414505.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=ugpA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217351.1;locus_tag=AL55_RS19915;product=carbohydrate ABC transporter permease;protein_id=WP_003414505.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3131050 3132369 . - . ID=gene-AL55_RS19920;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=AL55_RS19920;old_locus_tag=AL55_02937 NZ_KK316828.1 Protein Homology CDS 3131050 3132369 . - 0 ID=cds-WP_003414506.1;Parent=gene-AL55_RS19920;Dbxref=GenBank:WP_003414506.1;Name=WP_003414506.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217352.1;locus_tag=AL55_RS19920;product=MATE family efflux transporter;protein_id=WP_003414506.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3132376 3133386 . - . ID=gene-AL55_RS19925;Name=nrnA;gbkey=Gene;gene=nrnA;gene_biotype=protein_coding;locus_tag=AL55_RS19925;old_locus_tag=AL55_02938 NZ_KK316828.1 Protein Homology CDS 3132376 3133386 . - 0 ID=cds-WP_003905944.1;Parent=gene-AL55_RS19925;Dbxref=GenBank:WP_003905944.1;Name=WP_003905944.1;gbkey=CDS;gene=nrnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217353.1;locus_tag=AL55_RS19925;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=WP_003905944.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3133361 3133912 . - . ID=gene-AL55_RS19930;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AL55_RS19930;old_locus_tag=AL55_02939 NZ_KK316828.1 Protein Homology CDS 3133361 3133912 . - 0 ID=cds-WP_003414508.1;Parent=gene-AL55_RS19930;Dbxref=GenBank:WP_003414508.1;Name=WP_003414508.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217354.1;locus_tag=AL55_RS19930;product=30S ribosome-binding factor RbfA;protein_id=WP_003414508.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3133912 3136614 . - . ID=gene-AL55_RS19935;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AL55_RS19935;old_locus_tag=AL55_02940 NZ_KK316828.1 Protein Homology CDS 3133912 3136614 . - 0 ID=cds-WP_003899505.1;Parent=gene-AL55_RS19935;Dbxref=GenBank:WP_003899505.1;Name=WP_003899505.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217355.1;locus_tag=AL55_RS19935;product=translation initiation factor IF-2;protein_id=WP_003899505.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3136700 3137077 . - . ID=gene-AL55_RS19940;Name=AL55_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19940;old_locus_tag=AL55_02941 NZ_KK316828.1 Protein Homology CDS 3136700 3137077 . - 0 ID=cds-WP_003899506.1;Parent=gene-AL55_RS19940;Dbxref=GenBank:WP_003899506.1;Name=WP_003899506.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF016204.6;locus_tag=AL55_RS19940;product=YlxR family protein;protein_id=WP_003899506.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3137126 3138169 . - . ID=gene-AL55_RS19945;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AL55_RS19945;old_locus_tag=AL55_02942 NZ_KK316828.1 Protein Homology CDS 3137126 3138169 . - 0 ID=cds-WP_003414511.1;Parent=gene-AL55_RS19945;Dbxref=GenBank:WP_003414511.1;Name=WP_003414511.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217357.1;locus_tag=AL55_RS19945;product=transcription termination factor NusA;protein_id=WP_003414511.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3138166 3138717 . - . ID=gene-AL55_RS19950;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=AL55_RS19950;old_locus_tag=AL55_02943 NZ_KK316828.1 Protein Homology CDS 3138166 3138717 . - 0 ID=cds-WP_003899507.1;Parent=gene-AL55_RS19950;Dbxref=GenBank:WP_003899507.1;Name=WP_003899507.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217358.1;locus_tag=AL55_RS19950;product=ribosome maturation factor RimP;protein_id=WP_003899507.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3138912 3139457 . + . ID=gene-AL55_RS19955;Name=AL55_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19955;old_locus_tag=AL55_02944 NZ_KK316828.1 Protein Homology CDS 3138912 3139457 . + 0 ID=cds-WP_003414516.1;Parent=gene-AL55_RS19955;Dbxref=GenBank:WP_003414516.1;Name=WP_003414516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217359.1;locus_tag=AL55_RS19955;product=hypothetical protein;protein_id=WP_003414516.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3139454 3139942 . + . ID=gene-AL55_RS19960;Name=AL55_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19960;old_locus_tag=AL55_02945 NZ_KK316828.1 Protein Homology CDS 3139454 3139942 . + 0 ID=cds-WP_003414522.1;Parent=gene-AL55_RS19960;Dbxref=GenBank:WP_003414522.1;Name=WP_003414522.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217360.1;locus_tag=AL55_RS19960;product=ferritin-like domain-containing protein;protein_id=WP_003414522.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3139943 3141691 . - . ID=gene-AL55_RS19965;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=AL55_RS19965;old_locus_tag=AL55_02946 NZ_KK316828.1 Protein Homology CDS 3139943 3141691 . - 0 ID=cds-WP_003899508.1;Parent=gene-AL55_RS19965;Dbxref=GenBank:WP_003899508.1;Name=WP_003899508.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;gene=proS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217361.1;locus_tag=AL55_RS19965;product=proline--tRNA ligase;protein_id=WP_003899508.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3141780 3143372 . - . ID=gene-AL55_RS19970;Name=efpA;gbkey=Gene;gene=efpA;gene_biotype=protein_coding;locus_tag=AL55_RS19970;old_locus_tag=AL55_02947 NZ_KK316828.1 Protein Homology CDS 3141780 3143372 . - 0 ID=cds-WP_003414532.1;Parent=gene-AL55_RS19970;Dbxref=GenBank:WP_003414532.1;Name=WP_003414532.1;gbkey=CDS;gene=efpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217362.1;locus_tag=AL55_RS19970;product=multidrug efflux MFS transporter EfpA;protein_id=WP_003414532.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3143395 3144612 . - . ID=gene-AL55_RS19975;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=AL55_RS19975;old_locus_tag=AL55_02948 NZ_KK316828.1 Protein Homology CDS 3143395 3144612 . - 0 ID=cds-WP_003414535.1;Parent=gene-AL55_RS19975;Dbxref=GenBank:WP_003414535.1;Name=WP_003414535.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215025.2;locus_tag=AL55_RS19975;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_003414535.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3144889 3146263 . - . ID=gene-AL55_RS0105305;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=pseudogene;locus_tag=AL55_RS0105305;old_locus_tag=AL55_02949;pseudo=true NZ_KK316828.1 Protein Homology CDS 3144889 3146263 . - 0 ID=cds-AL55_RS0105305;Parent=gene-AL55_RS0105305;Note=frameshifted;Ontology_term=GO:0042242;gbkey=CDS;gene=cobB;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217364.1;locus_tag=AL55_RS0105305;product=cobyrinate a%2Cc-diamide synthase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3146263 3146886 . - . ID=gene-AL55_RS19980;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=AL55_RS19980;old_locus_tag=AL55_02950 NZ_KK316828.1 Protein Homology CDS 3146263 3146886 . - 0 ID=cds-WP_003414539.1;Parent=gene-AL55_RS19980;Dbxref=GenBank:WP_003414539.1;Name=WP_003414539.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177908.1;locus_tag=AL55_RS19980;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_003414539.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3146907 3148796 . - . ID=gene-AL55_RS19985;Name=AL55_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19985;old_locus_tag=AL55_02951 NZ_KK316828.1 Protein Homology CDS 3146907 3148796 . - 0 ID=cds-WP_003901481.1;Parent=gene-AL55_RS19985;Dbxref=GenBank:WP_003901481.1;Name=WP_003901481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217366.1;locus_tag=AL55_RS19985;product=magnesium chelatase subunit D family protein;protein_id=WP_003901481.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3148793 3149263 . - . ID=gene-AL55_RS19990;Name=AL55_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS19990;old_locus_tag=AL55_02952 NZ_KK316828.1 Protein Homology CDS 3148793 3149263 . - 0 ID=cds-WP_003414543.1;Parent=gene-AL55_RS19990;Dbxref=GenBank:WP_003414543.1;Name=WP_003414543.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217367.1;locus_tag=AL55_RS19990;product=GNAT family N-acetyltransferase;protein_id=WP_003414543.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3149322 3150803 . - . ID=gene-AL55_RS19995;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=AL55_RS19995;old_locus_tag=AL55_02953 NZ_KK316828.1 Protein Homology CDS 3149322 3150803 . - 0 ID=cds-WP_003414545.1;Parent=gene-AL55_RS19995;Dbxref=GenBank:WP_003414545.1;Name=WP_003414545.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217368.1;locus_tag=AL55_RS19995;product=malate dehydrogenase (quinone);protein_id=WP_003414545.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3151010 3152857 . + . ID=gene-AL55_RS20000;Name=AL55_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20000;old_locus_tag=AL55_02954 NZ_KK316828.1 Protein Homology CDS 3151010 3152857 . + 0 ID=cds-WP_009938581.1;Parent=gene-AL55_RS20000;Dbxref=GenBank:WP_009938581.1;Name=WP_009938581.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177909.1;locus_tag=AL55_RS20000;product=PE family protein;protein_id=WP_009938581.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3152894 3153934 . + . ID=gene-AL55_RS20005;Name=AL55_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20005;old_locus_tag=AL55_02955 NZ_KK316828.1 Protein Homology CDS 3152894 3153934 . + 0 ID=cds-WP_003414553.1;Parent=gene-AL55_RS20005;Dbxref=GenBank:WP_003414553.1;Name=WP_003414553.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217370.1;locus_tag=AL55_RS20005;product=alpha/beta hydrolase;protein_id=WP_003414553.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3153947 3155326 . + . ID=gene-AL55_RS20010;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=AL55_RS20010;old_locus_tag=AL55_02956 NZ_KK316828.1 Protein Homology CDS 3153947 3155326 . + 0 ID=cds-WP_003414557.1;Parent=gene-AL55_RS20010;Dbxref=GenBank:WP_003414557.1;Name=WP_003414557.1;Ontology_term=GO:0010126,GO:0050627,GO:0070402;gbkey=CDS;gene=mtr;go_function=mycothione reductase [NAD(P)H] activity|0050627||IEA,NADPH binding|0070402||IEA;go_process=mycothiol metabolic process|0010126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177910.1;locus_tag=AL55_RS20010;product=mycothione reductase;protein_id=WP_003414557.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3155426 3156544 . + . ID=gene-AL55_RS20015;Name=nicT;gbkey=Gene;gene=nicT;gene_biotype=protein_coding;locus_tag=AL55_RS20015;old_locus_tag=AL55_02957 NZ_KK316828.1 Protein Homology CDS 3155426 3156544 . + 0 ID=cds-WP_003414559.1;Parent=gene-AL55_RS20015;Dbxref=GenBank:WP_003414559.1;Name=WP_003414559.1;gbkey=CDS;gene=nicT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217372.1;locus_tag=AL55_RS20015;product=Nickel transporter NicT;protein_id=WP_003414559.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3156610 3156942 . + . ID=gene-AL55_RS27025;Name=AL55_RS27025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27025;old_locus_tag=AL55_02958 NZ_KK316828.1 Protein Homology CDS 3156610 3156942 . + 0 ID=cds-WP_003414562.1;Parent=gene-AL55_RS27025;Dbxref=GenBank:WP_003414562.1;Name=WP_003414562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414562.1;locus_tag=AL55_RS27025;product=GTP-binding protein;protein_id=WP_003414562.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3156954 3157169 . + . ID=gene-AL55_RS27030;Name=AL55_RS27030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27030;old_locus_tag=AL55_02959 NZ_KK316828.1 Protein Homology CDS 3156954 3157169 . + 0 ID=cds-WP_003414566.1;Parent=gene-AL55_RS27030;Dbxref=GenBank:WP_003414566.1;Name=WP_003414566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414566.1;locus_tag=AL55_RS27030;product=P-loop NTPase family protein;protein_id=WP_003414566.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3157325 3158101 . - . ID=gene-AL55_RS20030;Name=AL55_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20030;old_locus_tag=AL55_02960 NZ_KK316828.1 Protein Homology CDS 3157325 3158101 . - 0 ID=cds-WP_003414570.1;Parent=gene-AL55_RS20030;Dbxref=GenBank:WP_003414570.1;Name=WP_003414570.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217373.1;locus_tag=AL55_RS20030;product=3-oxoacyl-ACP reductase;protein_id=WP_003414570.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3158098 3159465 . - . ID=gene-AL55_RS20035;Name=aldC;gbkey=Gene;gene=aldC;gene_biotype=protein_coding;locus_tag=AL55_RS20035;old_locus_tag=AL55_02961 NZ_KK316828.1 Protein Homology CDS 3158098 3159465 . - 0 ID=cds-WP_003900585.1;Parent=gene-AL55_RS20035;Dbxref=GenBank:WP_003900585.1;Name=WP_003900585.1;Ontology_term=GO:0004030;gbkey=CDS;gene=aldC;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013988958.1;locus_tag=AL55_RS20035;product=aldehyde dehydrogenase family protein;protein_id=WP_003900585.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3159462 3160349 . - . ID=gene-AL55_RS20040;Name=AL55_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20040;old_locus_tag=AL55_02962 NZ_KK316828.1 Protein Homology CDS 3159462 3160349 . - 0 ID=cds-WP_073128469.1;Parent=gene-AL55_RS20040;Dbxref=GenBank:WP_073128469.1;Name=WP_073128469.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901484.1;locus_tag=AL55_RS20040;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_073128469.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3160315 3161688 . - . ID=gene-AL55_RS20045;Name=AL55_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20045;old_locus_tag=AL55_02963 NZ_KK316828.1 Protein Homology CDS 3160315 3161688 . - 0 ID=cds-WP_003414579.1;Parent=gene-AL55_RS20045;Dbxref=GenBank:WP_003414579.1;Name=WP_003414579.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217376.1;locus_tag=AL55_RS20045;product=glutamine synthetase family protein;protein_id=WP_003414579.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3161848 3162705 . - . ID=gene-AL55_RS20050;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AL55_RS20050;old_locus_tag=AL55_02964 NZ_KK316828.1 Protein Homology CDS 3161848 3162705 . - 0 ID=cds-WP_003899513.1;Parent=gene-AL55_RS20050;Dbxref=GenBank:WP_003899513.1;Name=WP_003899513.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177911.1;locus_tag=AL55_RS20050;product=type I methionyl aminopeptidase;protein_id=WP_003899513.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3162747 3163331 . - . ID=gene-AL55_RS20055;Name=AL55_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20055;old_locus_tag=AL55_02965 NZ_KK316828.1 Protein Homology CDS 3162747 3163331 . - 0 ID=cds-WP_003414585.1;Parent=gene-AL55_RS20055;Dbxref=GenBank:WP_003414585.1;Name=WP_003414585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217378.1;locus_tag=AL55_RS20055;product=DUF1707 SHOCT-like domain-containing protein;protein_id=WP_003414585.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3163434 3163682 . + . ID=gene-AL55_RS0105310;Name=AL55_RS0105310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105310;old_locus_tag=AL55_02966 NZ_KK316828.1 Protein Homology CDS 3163434 3163682 . + 0 ID=cds-WP_003913411.1;Parent=gene-AL55_RS0105310;Dbxref=GenBank:WP_003913411.1;Name=WP_003913411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411570.1;locus_tag=AL55_RS0105310;product=antitoxin VapB23;protein_id=WP_003913411.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3163679 3164059 . + . ID=gene-AL55_RS20060;Name=AL55_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20060;old_locus_tag=AL55_02967 NZ_KK316828.1 Protein Homology CDS 3163679 3164059 . + 0 ID=cds-WP_003414592.1;Parent=gene-AL55_RS20060;Dbxref=GenBank:WP_003414592.1;Name=WP_003414592.1;Ontology_term=GO:0004540,GO:0046872,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217379.1;locus_tag=AL55_RS20060;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414592.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3164141 3165952 . - . ID=gene-AL55_RS20065;Name=AL55_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20065;old_locus_tag=AL55_02968 NZ_KK316828.1 Protein Homology CDS 3164141 3165952 . - 0 ID=cds-WP_003414596.1;Parent=gene-AL55_RS20065;Dbxref=GenBank:WP_003414596.1;Name=WP_003414596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217380.1;locus_tag=AL55_RS20065;product=penicillin-binding protein;protein_id=WP_003414596.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3166224 3166505 . + . ID=gene-AL55_RS20070;Name=relF;gbkey=Gene;gene=relF;gene_biotype=protein_coding;locus_tag=AL55_RS20070;old_locus_tag=AL55_02969 NZ_KK316828.1 Protein Homology CDS 3166224 3166505 . + 0 ID=cds-WP_003414599.1;Parent=gene-AL55_RS20070;Dbxref=GenBank:WP_003414599.1;Name=WP_003414599.1;gbkey=CDS;gene=relF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217381.1;locus_tag=AL55_RS20070;product=type II toxin-antitoxin system antitoxin RelF;protein_id=WP_003414599.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3166509 3166772 . + . ID=gene-AL55_RS20075;Name=relG;gbkey=Gene;gene=relG;gene_biotype=protein_coding;locus_tag=AL55_RS20075;old_locus_tag=AL55_02970 NZ_KK316828.1 Protein Homology CDS 3166509 3166772 . + 0 ID=cds-WP_003414602.1;Parent=gene-AL55_RS20075;Dbxref=GenBank:WP_003414602.1;Name=WP_003414602.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;gene=relG;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217382.1;locus_tag=AL55_RS20075;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_003414602.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3167145 3167999 . - . ID=gene-AL55_RS20080;Name=AL55_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20080;old_locus_tag=AL55_02971 NZ_KK316828.1 Protein Homology CDS 3167145 3167999 . - 0 ID=cds-WP_003899516.1;Parent=gene-AL55_RS20080;Dbxref=GenBank:WP_003899516.1;Name=WP_003899516.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217383.1;locus_tag=AL55_RS20080;product=GNAT family N-acetyltransferase;protein_id=WP_003899516.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3168055 3169218 . - . ID=gene-AL55_RS20085;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=AL55_RS20085;old_locus_tag=AL55_02972 NZ_KK316828.1 Protein Homology CDS 3168055 3169218 . - 0 ID=cds-WP_003899517.1;Parent=gene-AL55_RS20085;Dbxref=GenBank:WP_003899517.1;Name=WP_003899517.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217384.1;locus_tag=AL55_RS20085;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_003899517.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3169235 3170449 . - . ID=gene-AL55_RS20090;Name=rip;gbkey=Gene;gene=rip;gene_biotype=protein_coding;locus_tag=AL55_RS20090;old_locus_tag=AL55_02973 NZ_KK316828.1 Protein Homology CDS 3169235 3170449 . - 0 ID=cds-WP_003414610.1;Parent=gene-AL55_RS20090;Dbxref=GenBank:WP_003414610.1;Name=WP_003414610.1;gbkey=CDS;gene=rip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217385.1;locus_tag=AL55_RS20090;product=zinc metalloprotease Rip;protein_id=WP_003414610.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3170457 3171698 . - . ID=gene-AL55_RS20095;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=AL55_RS20095;old_locus_tag=AL55_02974 NZ_KK316828.1 Protein Homology CDS 3170457 3171698 . - 0 ID=cds-WP_003414613.1;Parent=gene-AL55_RS20095;Dbxref=GenBank:WP_003414613.1;Name=WP_003414613.1;Ontology_term=GO:0008299,GO:0019288,GO:0030604,GO:0046872,GO:0005737;gbkey=CDS;gene=dxr;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217386.2;locus_tag=AL55_RS20095;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_003414613.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3171825 3172082 . + . ID=gene-AL55_RS20100;Name=AL55_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20100;old_locus_tag=AL55_02975 NZ_KK316828.1 Protein Homology CDS 3171825 3172082 . + 0 ID=cds-WP_003414620.1;Parent=gene-AL55_RS20100;Dbxref=GenBank:WP_003414620.1;Name=WP_003414620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217387.1;locus_tag=AL55_RS20100;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003414620.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3172069 3172512 . + . ID=gene-AL55_RS20105;Name=AL55_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20105;old_locus_tag=AL55_02976 NZ_KK316828.1 Protein Homology CDS 3172069 3172512 . + 0 ID=cds-WP_003414624.1;Parent=gene-AL55_RS20105;Dbxref=GenBank:WP_003414624.1;Name=WP_003414624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217388.1;locus_tag=AL55_RS20105;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414624.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3172592 3173254 . + . ID=gene-AL55_RS20110;Name=mpt83;gbkey=Gene;gene=mpt83;gene_biotype=protein_coding;locus_tag=AL55_RS20110;old_locus_tag=AL55_02977 NZ_KK316828.1 Protein Homology CDS 3172592 3173254 . + 0 ID=cds-WP_003414630.1;Parent=gene-AL55_RS20110;Dbxref=GenBank:WP_003414630.1;Name=WP_003414630.1;gbkey=CDS;gene=mpt83;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217389.1;locus_tag=AL55_RS20110;product=cell surface glycolipoprotein Mpt83;protein_id=WP_003414630.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3173350 3173541 . + . ID=gene-AL55_RS20115;Name=AL55_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20115;old_locus_tag=AL55_02978 NZ_KK316828.1 Protein Homology CDS 3173350 3173541 . + 0 ID=cds-WP_003414632.1;Parent=gene-AL55_RS20115;Dbxref=GenBank:WP_003414632.1;Name=WP_003414632.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015630591.1;locus_tag=AL55_RS20115;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003414632.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3173873 3175621 . + . ID=gene-AL55_RS20120;Name=AL55_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20120;old_locus_tag=AL55_02979 NZ_KK316828.1 Protein Homology CDS 3173873 3175621 . + 0 ID=cds-WP_003912869.1;Parent=gene-AL55_RS20120;Dbxref=GenBank:WP_003912869.1;Name=WP_003912869.1;Ontology_term=GO:0017004,GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303615.1;locus_tag=AL55_RS20120;product=cytochrome c biogenesis protein DipZ;protein_id=WP_003912869.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3175717 3176298 . + . ID=gene-AL55_RS20125;Name=AL55_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20125;old_locus_tag=AL55_02980 NZ_KK316828.1 Protein Homology CDS 3175717 3176298 . + 0 ID=cds-WP_003414644.1;Parent=gene-AL55_RS20125;Dbxref=GenBank:WP_003414644.1;Name=WP_003414644.1;Ontology_term=GO:0007155;gbkey=CDS;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217391.1;locus_tag=AL55_RS20125;product=fasciclin domain-containing protein;protein_id=WP_003414644.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3176398 3176664 . + . ID=gene-AL55_RS20130;Name=AL55_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20130;old_locus_tag=AL55_02981 NZ_KK316828.1 Protein Homology CDS 3176398 3176664 . + 0 ID=cds-WP_015456449.1;Parent=gene-AL55_RS20130;Dbxref=GenBank:WP_015456449.1;Name=WP_015456449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908416.1;locus_tag=AL55_RS20130;product=DUF2631 domain-containing protein;protein_id=WP_015456449.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3176695 3177558 . - . ID=gene-AL55_RS20135;Name=AL55_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20135;old_locus_tag=AL55_02982 NZ_KK316828.1 Protein Homology CDS 3176695 3177558 . - 0 ID=cds-WP_003899523.1;Parent=gene-AL55_RS20135;Dbxref=GenBank:WP_003899523.1;Name=WP_003899523.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177912.1;locus_tag=AL55_RS20135;product=cytochrome c biogenesis CcdA family protein;protein_id=WP_003899523.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3177563 3178084 . - . ID=gene-AL55_RS20140;Name=AL55_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20140;old_locus_tag=AL55_02983 NZ_KK316828.1 Protein Homology CDS 3177563 3178084 . - 0 ID=cds-WP_003414654.1;Parent=gene-AL55_RS20140;Dbxref=GenBank:WP_003414654.1;Name=WP_003414654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217394.1;locus_tag=AL55_RS20140;product=disulfide bond-forming protein DsbE;protein_id=WP_003414654.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3178270 3179364 . - . ID=gene-AL55_RS20145;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=AL55_RS20145;old_locus_tag=AL55_02984 NZ_KK316828.1 Protein Homology CDS 3178270 3179364 . - 0 ID=cds-WP_003414658.1;Parent=gene-AL55_RS20145;Dbxref=GenBank:WP_003414658.1;Name=WP_003414658.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875108.1;locus_tag=AL55_RS20145;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_003414658.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3179387 3180307 . - . ID=gene-AL55_RS20150;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AL55_RS20150;old_locus_tag=AL55_02985 NZ_KK316828.1 Protein Homology CDS 3179387 3180307 . - 0 ID=cds-WP_003414661.1;Parent=gene-AL55_RS20150;Dbxref=GenBank:WP_003414661.1;Name=WP_003414661.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;gene=cdsA;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217397.1;locus_tag=AL55_RS20150;product=phosphatidate cytidylyltransferase;protein_id=WP_003414661.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3180330 3180887 . - . ID=gene-AL55_RS20155;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AL55_RS20155;old_locus_tag=AL55_02986 NZ_KK316828.1 Protein Homology CDS 3180330 3180887 . - 0 ID=cds-WP_003414663.1;Parent=gene-AL55_RS20155;Dbxref=GenBank:WP_003414663.1;Name=WP_003414663.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217398.1;locus_tag=AL55_RS20155;product=ribosome recycling factor;protein_id=WP_003414663.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3180954 3181027 . - . ID=gene-AL55_RS28255;Name=AL55_RS28255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28255;partial=true;pseudo=true;start_range=.,3180954 NZ_KK316828.1 Protein Homology CDS 3180954 3181027 . - 0 ID=cds-AL55_RS28255;Parent=gene-AL55_RS28255;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=AL55_RS28255;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3180954;transl_table=11 NZ_KK316828.1 RefSeq gene 3181059 3181844 . - . ID=gene-AL55_RS20160;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AL55_RS20160;old_locus_tag=AL55_02987 NZ_KK316828.1 Protein Homology CDS 3181059 3181844 . - 0 ID=cds-WP_003414665.1;Parent=gene-AL55_RS20160;Dbxref=GenBank:WP_003414665.1;Name=WP_003414665.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217399.1;locus_tag=AL55_RS20160;product=UMP kinase;protein_id=WP_003414665.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3182079 3182837 . + . ID=gene-AL55_RS20165;Name=AL55_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20165;old_locus_tag=AL55_02988 NZ_KK316828.1 Protein Homology CDS 3182079 3182837 . + 0 ID=cds-WP_003414666.1;Parent=gene-AL55_RS20165;Dbxref=GenBank:WP_003414666.1;Name=WP_003414666.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917701.1;locus_tag=AL55_RS20165;product=winged helix-turn-helix domain-containing protein;protein_id=WP_003414666.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3182852 3184232 . - . ID=gene-AL55_RS20170;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AL55_RS20170;old_locus_tag=AL55_02989;pseudo=true NZ_KK316828.1 Protein Homology CDS 3182852 3184232 . - 0 ID=cds-AL55_RS20170;Parent=gene-AL55_RS20170;Note=frameshifted;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351709.1;locus_tag=AL55_RS20170;product=IS607 family element RNA-guided endonuclease TnpB;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3184232 3184819 . - . ID=gene-AL55_RS0105315;Name=AL55_RS0105315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105315;old_locus_tag=AL55_02990 NZ_KK316828.1 Protein Homology CDS 3184232 3184819 . - 0 ID=cds-WP_003414668.1;Parent=gene-AL55_RS0105315;Dbxref=GenBank:WP_003414668.1;Name=WP_003414668.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414668.1;locus_tag=AL55_RS0105315;product=IS607-like element IS1539 family transposase;protein_id=WP_003414668.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3185118 3185537 . + . ID=gene-AL55_RS20175;Name=AL55_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20175;old_locus_tag=AL55_02991 NZ_KK316828.1 Protein Homology CDS 3185118 3185537 . + 0 ID=cds-WP_003899525.1;Parent=gene-AL55_RS20175;Dbxref=GenBank:WP_003899525.1;Name=WP_003899525.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217403.1;locus_tag=AL55_RS20175;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003899525.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3185551 3186972 . - . ID=gene-AL55_RS20180;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=AL55_RS20180;old_locus_tag=AL55_02992 NZ_KK316828.1 Protein Homology CDS 3185551 3186972 . - 0 ID=cds-WP_003414672.1;Parent=gene-AL55_RS20180;Dbxref=GenBank:WP_003414672.1;Name=WP_003414672.1;Ontology_term=GO:0003824;gbkey=CDS;gene=amiC;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217404.1;locus_tag=AL55_RS20180;product=amidase;protein_id=WP_003414672.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3186979 3187794 . - . ID=gene-AL55_RS20185;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AL55_RS20185;old_locus_tag=AL55_02993 NZ_KK316828.1 Protein Homology CDS 3186979 3187794 . - 0 ID=cds-WP_003899527.1;Parent=gene-AL55_RS20185;Dbxref=GenBank:WP_003899527.1;Name=WP_003899527.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217405.1;locus_tag=AL55_RS20185;product=translation elongation factor Ts;protein_id=WP_003899527.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3187806 3188669 . - . ID=gene-AL55_RS20190;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AL55_RS20190;old_locus_tag=AL55_02994 NZ_KK316828.1 Protein Homology CDS 3187806 3188669 . - 0 ID=cds-WP_003899528.1;Parent=gene-AL55_RS20190;Dbxref=GenBank:WP_003899528.1;Name=WP_003899528.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217406.1;locus_tag=AL55_RS20190;product=30S ribosomal protein S2;protein_id=WP_003899528.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3188968 3189348 . + . ID=gene-AL55_RS27380;Name=AL55_RS27380;end_range=3189348,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27380;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 3188968 3189348 . + 0 ID=cds-AL55_RS27380;Parent=gene-AL55_RS27380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008237,GO:0046872;end_range=3189348,.;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013700.7;locus_tag=AL55_RS27380;partial=true;product=M23 family metallopeptidase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3189481 3190707 . - . ID=gene-AL55_RS20195;Name=AL55_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20195;old_locus_tag=AL55_02996 NZ_KK316828.1 Protein Homology CDS 3189481 3190707 . - 0 ID=cds-WP_003414680.1;Parent=gene-AL55_RS20195;Dbxref=GenBank:WP_003414680.1;Name=WP_003414680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177913.1;locus_tag=AL55_RS20195;product=PPE family protein;protein_id=WP_003414680.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3191107 3192084 . + . ID=gene-AL55_RS20200;Name=AL55_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20200;old_locus_tag=AL55_02997 NZ_KK316828.1 Protein Homology CDS 3191107 3192084 . + 0 ID=cds-WP_003414686.1;Parent=gene-AL55_RS20200;Dbxref=GenBank:WP_003414686.1;Name=WP_003414686.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217409.1;locus_tag=AL55_RS20200;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003414686.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3192081 3192977 . - . ID=gene-AL55_RS20205;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AL55_RS20205;old_locus_tag=AL55_02998 NZ_KK316828.1 Protein Homology CDS 3192081 3192977 . - 0 ID=cds-WP_003414689.1;Parent=gene-AL55_RS20205;Dbxref=GenBank:WP_003414689.1;Name=WP_003414689.1;Ontology_term=GO:0006313,GO:0007059,GO:0051301,GO:0003677,GO:0009037;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA,tyrosine-based site-specific recombinase activity|0009037||IEA;go_process=DNA transposition|0006313||IEA,chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217410.1;locus_tag=AL55_RS20205;product=tyrosine recombinase XerC;protein_id=WP_003414689.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3193068 3193919 . - . ID=gene-AL55_RS20210;Name=viuB;gbkey=Gene;gene=viuB;gene_biotype=protein_coding;locus_tag=AL55_RS20210;old_locus_tag=AL55_02999 NZ_KK316828.1 Protein Homology CDS 3193068 3193919 . - 0 ID=cds-WP_003900590.1;Parent=gene-AL55_RS20210;Dbxref=GenBank:WP_003900590.1;Name=WP_003900590.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;gene=viuB;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217411.1;locus_tag=AL55_RS20210;product=siderophore-interacting protein;protein_id=WP_003900590.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3193952 3195121 . - . ID=gene-AL55_RS20215;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=AL55_RS20215;old_locus_tag=AL55_03000 NZ_KK316828.1 Protein Homology CDS 3193952 3195121 . - 0 ID=cds-WP_003414694.1;Parent=gene-AL55_RS20215;Dbxref=GenBank:WP_003414694.1;Name=WP_003414694.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217412.2;locus_tag=AL55_RS20215;product=DNA-processing protein DprA;protein_id=WP_003414694.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3195118 3196629 . - . ID=gene-AL55_RS20220;Name=AL55_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20220;old_locus_tag=AL55_03001 NZ_KK316828.1 Protein Homology CDS 3195118 3196629 . - 0 ID=cds-WP_003414700.1;Parent=gene-AL55_RS20220;Dbxref=GenBank:WP_003414700.1;Name=WP_003414700.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217413.1;locus_tag=AL55_RS20220;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_003414700.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3196629 3197015 . - . ID=gene-AL55_RS20225;Name=AL55_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20225;old_locus_tag=AL55_03002 NZ_KK316828.1 Protein Homology CDS 3196629 3197015 . - 0 ID=cds-WP_003414702.1;Parent=gene-AL55_RS20225;Dbxref=GenBank:WP_003414702.1;Name=WP_003414702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217414.1;locus_tag=AL55_RS20225;product=YraN family protein;protein_id=WP_003414702.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3197263 3198093 . - . ID=gene-AL55_RS20230;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=AL55_RS20230;old_locus_tag=AL55_03003 NZ_KK316828.1 Protein Homology CDS 3197263 3198093 . - 0 ID=cds-WP_003905963.1;Parent=gene-AL55_RS20230;Dbxref=GenBank:WP_003905963.1;Name=WP_003905963.1;Ontology_term=GO:0016783;gbkey=CDS;gene=fdhD;go_function=sulfurtransferase activity|0016783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217415.1;locus_tag=AL55_RS20230;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_003905963.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3198093 3200432 . - . ID=gene-AL55_RS20235;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=AL55_RS20235;old_locus_tag=AL55_03004 NZ_KK316828.1 Protein Homology CDS 3198093 3200432 . - 0 ID=cds-WP_003899532.1;Parent=gene-AL55_RS20235;Dbxref=GenBank:WP_003899532.1;Name=WP_003899532.1;Ontology_term=GO:0016491,GO:0030151,GO:0051539;gbkey=CDS;gene=fdhF;go_function=oxidoreductase activity|0016491||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217416.1;locus_tag=AL55_RS20235;product=FdhF/YdeP family oxidoreductase;protein_id=WP_003899532.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3200490 3200795 . - . ID=gene-AL55_RS20240;Name=AL55_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20240;old_locus_tag=AL55_03005 NZ_KK316828.1 Protein Homology CDS 3200490 3200795 . - 0 ID=cds-WP_003414710.1;Parent=gene-AL55_RS20240;Dbxref=GenBank:WP_003414710.1;Name=WP_003414710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217417.1;locus_tag=AL55_RS20240;product=DUF2469 domain-containing protein;protein_id=WP_003414710.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3200849 3201643 . - . ID=gene-AL55_RS20245;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AL55_RS20245;old_locus_tag=AL55_03006 NZ_KK316828.1 Protein Homology CDS 3200849 3201643 . - 0 ID=cds-WP_003414713.1;Parent=gene-AL55_RS20245;Dbxref=GenBank:WP_003414713.1;Name=WP_003414713.1;gbkey=CDS;gene=rnhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217418.1;locus_tag=AL55_RS20245;product=ribonuclease HII;protein_id=WP_003414713.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3201657 3202541 . - . ID=gene-AL55_RS20250;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AL55_RS20250;old_locus_tag=AL55_03007 NZ_KK316828.1 Protein Homology CDS 3201657 3202541 . - 0 ID=cds-WP_003414715.1;Parent=gene-AL55_RS20250;Dbxref=GenBank:WP_003414715.1;Name=WP_003414715.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217419.1;locus_tag=AL55_RS20250;product=signal peptidase I;protein_id=WP_003414715.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3202599 3202940 . - . ID=gene-AL55_RS20255;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AL55_RS20255;old_locus_tag=AL55_03008 NZ_KK316828.1 Protein Homology CDS 3202599 3202940 . - 0 ID=cds-WP_003414717.1;Parent=gene-AL55_RS20255;Dbxref=GenBank:WP_003414717.1;Name=WP_003414717.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217420.1;locus_tag=AL55_RS20255;product=50S ribosomal protein L19;protein_id=WP_003414717.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3203315 3204259 . + . ID=gene-AL55_RS20260;Name=AL55_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20260;old_locus_tag=AL55_03009 NZ_KK316828.1 Protein Homology CDS 3203315 3204259 . + 0 ID=cds-WP_003910944.1;Parent=gene-AL55_RS20260;Dbxref=GenBank:WP_003910944.1;Name=WP_003910944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217421.1;locus_tag=AL55_RS20260;product=serine hydrolase;protein_id=WP_003910944.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3204351 3205043 . - . ID=gene-AL55_RS20265;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AL55_RS20265;old_locus_tag=AL55_03010 NZ_KK316828.1 Protein Homology CDS 3204351 3205043 . - 0 ID=cds-WP_003414722.1;Parent=gene-AL55_RS20265;Dbxref=GenBank:WP_003414722.1;Name=WP_003414722.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217422.1;locus_tag=AL55_RS20265;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_003414722.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3205047 3205577 . - . ID=gene-AL55_RS20270;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AL55_RS20270;old_locus_tag=AL55_03011 NZ_KK316828.1 Protein Homology CDS 3205047 3205577 . - 0 ID=cds-WP_003414726.1;Parent=gene-AL55_RS20270;Dbxref=GenBank:WP_003414726.1;Name=WP_003414726.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217423.1;locus_tag=AL55_RS20270;product=ribosome maturation factor RimM;protein_id=WP_003414726.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3205591 3205833 . - . ID=gene-AL55_RS20275;Name=AL55_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20275;old_locus_tag=AL55_03012 NZ_KK316828.1 Protein Homology CDS 3205591 3205833 . - 0 ID=cds-WP_003414728.1;Parent=gene-AL55_RS20275;Dbxref=GenBank:WP_003414728.1;Name=WP_003414728.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217424.1;locus_tag=AL55_RS20275;product=RNA-binding protein;protein_id=WP_003414728.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3205841 3206329 . - . ID=gene-AL55_RS20280;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AL55_RS20280;old_locus_tag=AL55_03013 NZ_KK316828.1 Protein Homology CDS 3205841 3206329 . - 0 ID=cds-WP_003414731.1;Parent=gene-AL55_RS20280;Dbxref=GenBank:WP_003414731.1;Name=WP_003414731.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsP;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217425.1;locus_tag=AL55_RS20280;product=30S ribosomal protein S16;protein_id=WP_003414731.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3206513 3206932 . - . ID=gene-AL55_RS20285;Name=AL55_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20285;old_locus_tag=AL55_03014 NZ_KK316828.1 Protein Homology CDS 3206513 3206932 . - 0 ID=cds-WP_003912031.1;Parent=gene-AL55_RS20285;Dbxref=GenBank:WP_003912031.1;Name=WP_003912031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875068.1;locus_tag=AL55_RS20285;product=nuclear transport factor 2 family protein;protein_id=WP_003912031.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3207025 3207900 . + . ID=gene-AL55_RS20290;Name=dacB2;gbkey=Gene;gene=dacB2;gene_biotype=protein_coding;locus_tag=AL55_RS20290;old_locus_tag=AL55_03015 NZ_KK316828.1 Protein Homology CDS 3207025 3207900 . + 0 ID=cds-WP_003414736.1;Parent=gene-AL55_RS20290;Dbxref=GenBank:WP_003414736.1;Name=WP_003414736.1;gbkey=CDS;gene=dacB2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177914.1;locus_tag=AL55_RS20290;product=D-alanyl-D-alanine carboxypeptidase DacB2;protein_id=WP_003414736.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3207960 3208547 . - . ID=gene-AL55_RS20295;Name=AL55_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20295;old_locus_tag=AL55_03016 NZ_KK316828.1 Protein Homology CDS 3207960 3208547 . - 0 ID=cds-WP_003414739.1;Parent=gene-AL55_RS20295;Dbxref=GenBank:WP_003414739.1;Name=WP_003414739.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217428.1;locus_tag=AL55_RS20295;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003414739.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3208549 3210384 . - . ID=gene-AL55_RS20300;Name=AL55_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20300;old_locus_tag=AL55_03017 NZ_KK316828.1 Protein Homology CDS 3208549 3210384 . - 0 ID=cds-WP_003899536.1;Parent=gene-AL55_RS20300;Dbxref=GenBank:WP_003899536.1;Name=WP_003899536.1;Ontology_term=GO:0047420;gbkey=CDS;go_function=N-acyl-D-amino-acid deacylase activity|0047420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217429.1;locus_tag=AL55_RS20300;product=N-acyl-D-amino-acid deacylase family protein;protein_id=WP_003899536.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3210453 3212210 . - . ID=gene-AL55_RS20305;Name=pknI;gbkey=Gene;gene=pknI;gene_biotype=protein_coding;locus_tag=AL55_RS20305;old_locus_tag=AL55_03018 NZ_KK316828.1 Protein Homology CDS 3210453 3212210 . - 0 ID=cds-WP_003900593.1;Parent=gene-AL55_RS20305;Dbxref=GenBank:WP_003900593.1;Name=WP_003900593.1;gbkey=CDS;gene=pknI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217430.1;locus_tag=AL55_RS20305;product=serine/threonine protein kinase PknI;protein_id=WP_003900593.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3212254 3213366 . - . ID=gene-AL55_RS20310;Name=AL55_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20310;old_locus_tag=AL55_03019 NZ_KK316828.1 Protein Homology CDS 3212254 3213366 . - 0 ID=cds-WP_003899537.1;Parent=gene-AL55_RS20310;Dbxref=GenBank:WP_003899537.1;Name=WP_003899537.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217431.1;locus_tag=AL55_RS20310;product=metal-dependent hydrolase family protein;protein_id=WP_003899537.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3213394 3214971 . - . ID=gene-AL55_RS20315;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AL55_RS20315;old_locus_tag=AL55_03020 NZ_KK316828.1 Protein Homology CDS 3213394 3214971 . - 0 ID=cds-WP_003414748.1;Parent=gene-AL55_RS20315;Dbxref=GenBank:WP_003414748.1;Name=WP_003414748.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217432.1;locus_tag=AL55_RS20315;product=signal recognition particle protein;protein_id=WP_003414748.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3215121 3216929 . + . ID=gene-AL55_RS20320;Name=AL55_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20320;old_locus_tag=AL55_03021 NZ_KK316828.1 Protein Homology CDS 3215121 3216929 . + 0 ID=cds-WP_003912033.1;Parent=gene-AL55_RS20320;Dbxref=GenBank:WP_003912033.1;Name=WP_003912033.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584875.1;locus_tag=AL55_RS20320;product=DEAD/DEAH box helicase;protein_id=WP_003912033.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3216940 3219366 . - . ID=gene-AL55_RS20325;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AL55_RS20325;old_locus_tag=AL55_03022 NZ_KK316828.1 Protein Homology CDS 3216940 3219366 . - 0 ID=cds-WP_003899539.1;Parent=gene-AL55_RS20325;Dbxref=GenBank:WP_003899539.1;Name=WP_003899539.1;Ontology_term=GO:0008152,GO:0008773;gbkey=CDS;gene=glnD;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217434.1;locus_tag=AL55_RS20325;product=[protein-PII] uridylyltransferase;protein_id=WP_003899539.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3219424 3219762 . - . ID=gene-AL55_RS20330;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=AL55_RS20330;old_locus_tag=AL55_03023 NZ_KK316828.1 Protein Homology CDS 3219424 3219762 . - 0 ID=cds-WP_003414756.1;Parent=gene-AL55_RS20330;Dbxref=GenBank:WP_003414756.1;Name=WP_003414756.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217435.1;locus_tag=AL55_RS20330;product=nitrogen regulatory protein P-II;protein_id=WP_003414756.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3219759 3221192 . - . ID=gene-AL55_RS0105330;Name=amt;gbkey=Gene;gene=amt;gene_biotype=pseudogene;locus_tag=AL55_RS0105330;pseudo=true NZ_KK316828.1 Protein Homology CDS 3219759 3221192 . - 0 ID=cds-AL55_RS0105330;Parent=gene-AL55_RS0105330;Note=internal stop;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;gene=amt;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217436.1;locus_tag=AL55_RS0105330;product=ammonium transporter;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3221949 3223217 . - . ID=gene-AL55_RS20335;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=AL55_RS20335;old_locus_tag=AL55_03025 NZ_KK316828.1 Protein Homology CDS 3221949 3223217 . - 0 ID=cds-WP_003899541.1;Parent=gene-AL55_RS20335;Dbxref=GenBank:WP_003899541.1;Name=WP_003899541.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217437.1;locus_tag=AL55_RS20335;product=signal recognition particle-docking protein FtsY;protein_id=WP_003899541.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3223267 3226884 . - . ID=gene-AL55_RS20340;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=AL55_RS20340;old_locus_tag=AL55_03026 NZ_KK316828.1 Protein Homology CDS 3223267 3226884 . - 0 ID=cds-WP_003899542.1;Parent=gene-AL55_RS20340;Dbxref=GenBank:WP_003899542.1;Name=WP_003899542.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217438.2;locus_tag=AL55_RS20340;product=chromosome segregation protein SMC;protein_id=WP_003899542.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3226896 3227177 . - . ID=gene-AL55_RS20345;Name=acyP;gbkey=Gene;gene=acyP;gene_biotype=protein_coding;locus_tag=AL55_RS20345;old_locus_tag=AL55_03027 NZ_KK316828.1 Protein Homology CDS 3226896 3227177 . - 0 ID=cds-WP_003414811.1;Parent=gene-AL55_RS20345;Dbxref=GenBank:WP_003414811.1;Name=WP_003414811.1;Ontology_term=GO:0003998;gbkey=CDS;gene=acyP;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177679.1;locus_tag=AL55_RS20345;product=acylphosphatase;protein_id=WP_003414811.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3227164 3227574 . - . ID=gene-AL55_RS20350;Name=AL55_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20350;old_locus_tag=AL55_03028 NZ_KK316828.1 Protein Homology CDS 3227164 3227574 . - 0 ID=cds-WP_003902372.1;Parent=gene-AL55_RS20350;Dbxref=GenBank:WP_003902372.1;Name=WP_003902372.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217439.1;locus_tag=AL55_RS20350;product=OsmC family protein;protein_id=WP_003902372.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3227676 3228545 . - . ID=gene-AL55_RS20355;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AL55_RS20355;old_locus_tag=AL55_03029 NZ_KK316828.1 Protein Homology CDS 3227676 3228545 . - 0 ID=cds-WP_003414814.1;Parent=gene-AL55_RS20355;Dbxref=GenBank:WP_003414814.1;Name=WP_003414814.1;Ontology_term=GO:0006281,GO:0008534,GO:0046872,GO:0005737;gbkey=CDS;gene=mutM;go_component=cytoplasm|0005737||IEA;go_function=oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217440.1;locus_tag=AL55_RS20355;product=DNA-formamidopyrimidine glycosylase;protein_id=WP_003414814.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3228904 3229626 . - . ID=gene-AL55_RS20360;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AL55_RS20360;old_locus_tag=AL55_03030 NZ_KK316828.1 Protein Homology CDS 3228904 3229626 . - 0 ID=cds-WP_003414820.1;Parent=gene-AL55_RS20360;Dbxref=GenBank:WP_003414820.1;Name=WP_003414820.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217441.1;locus_tag=AL55_RS20360;product=ribonuclease III;protein_id=WP_003414820.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3229623 3230210 . - . ID=gene-AL55_RS20365;Name=AL55_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20365;old_locus_tag=AL55_03031 NZ_KK316828.1 Protein Homology CDS 3229623 3230210 . - 0 ID=cds-WP_003912009.1;Parent=gene-AL55_RS20365;Dbxref=GenBank:WP_003912009.1;Name=WP_003912009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912009.1;locus_tag=AL55_RS20365;product=YceD family protein;protein_id=WP_003912009.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3230297 3231034 . - . ID=gene-AL55_RS20370;Name=sepIVA;gbkey=Gene;gene=sepIVA;gene_biotype=protein_coding;locus_tag=AL55_RS20370;old_locus_tag=AL55_03032 NZ_KK316828.1 Protein Homology CDS 3230297 3231034 . - 0 ID=cds-WP_003414826.1;Parent=gene-AL55_RS20370;Dbxref=GenBank:WP_003414826.1;Name=WP_003414826.1;gbkey=CDS;gene=sepIVA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217443.1;locus_tag=AL55_RS20370;product=cell division protein SepIVA;protein_id=WP_003414826.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3231273 3232058 . + . ID=gene-AL55_RS20375;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=AL55_RS20375;old_locus_tag=AL55_03033 NZ_KK316828.1 Protein Homology CDS 3231273 3232058 . + 0 ID=cds-WP_003414828.1;Parent=gene-AL55_RS20375;Dbxref=GenBank:WP_003414828.1;Name=WP_003414828.1;gbkey=CDS;gene=tesA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217444.1;locus_tag=AL55_RS20375;product=thioesterase TesA;protein_id=WP_003414828.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3232045 3232356 . + . ID=gene-AL55_RS20380;Name=AL55_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20380;old_locus_tag=AL55_03034 NZ_KK316828.1 Protein Homology CDS 3232045 3232356 . + 0 ID=cds-WP_003900596.1;Parent=gene-AL55_RS20380;Dbxref=GenBank:WP_003900596.1;Name=WP_003900596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217445.1;locus_tag=AL55_RS20380;product=hypothetical protein;protein_id=WP_003900596.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3232772 3234523 . + . ID=gene-AL55_RS20385;Name=fadD26;gbkey=Gene;gene=fadD26;gene_biotype=protein_coding;gene_synonym=faaL26;locus_tag=AL55_RS20385;old_locus_tag=AL55_03035 NZ_KK316828.1 Protein Homology CDS 3232772 3234523 . + 0 ID=cds-WP_003900597.1;Parent=gene-AL55_RS20385;Dbxref=GenBank:WP_003900597.1;Name=WP_003900597.1;gbkey=CDS;gene=fadD26;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217446.2;locus_tag=AL55_RS20385;product=long-chain-fatty-acid--AMP ligase FAAL26/FadD26;protein_id=WP_003900597.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3234520 3240150 . + . ID=gene-AL55_RS20390;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=AL55_RS20390;old_locus_tag=AL55_03036 NZ_KK316828.1 Protein Homology CDS 3234520 3240150 . + 0 ID=cds-WP_003902374.1;Parent=gene-AL55_RS20390;Dbxref=GenBank:WP_003902374.1;Name=WP_003902374.1;gbkey=CDS;gene=ppsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217447.1;locus_tag=AL55_RS20390;product=phthiocerol type I polyketide synthase PpsA;protein_id=WP_003902374.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3240147 3244763 . + . ID=gene-AL55_RS20395;Name=ppsB;gbkey=Gene;gene=ppsB;gene_biotype=protein_coding;locus_tag=AL55_RS20395;old_locus_tag=AL55_03037 NZ_KK316828.1 Protein Homology CDS 3240147 3244763 . + 0 ID=cds-WP_003899547.1;Parent=gene-AL55_RS20395;Dbxref=GenBank:WP_003899547.1;Name=WP_003899547.1;gbkey=CDS;gene=ppsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217448.1;locus_tag=AL55_RS20395;product=phthiocerol type I polyketide synthase PpsB;protein_id=WP_003899547.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3244760 3251326 . + . ID=gene-AL55_RS20400;Name=ppsC;gbkey=Gene;gene=ppsC;gene_biotype=protein_coding;locus_tag=AL55_RS20400;old_locus_tag=AL55_03038 NZ_KK316828.1 Protein Homology CDS 3244760 3251326 . + 0 ID=cds-WP_003414837.1;Parent=gene-AL55_RS20400;Dbxref=GenBank:WP_003414837.1;Name=WP_003414837.1;gbkey=CDS;gene=ppsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217449.1;locus_tag=AL55_RS20400;product=phthiocerol type I polyketide synthase PpsC;protein_id=WP_003414837.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3251323 3256806 . + . ID=gene-AL55_RS20405;Name=ppsD;gbkey=Gene;gene=ppsD;gene_biotype=protein_coding;locus_tag=AL55_RS20405;old_locus_tag=AL55_03039 NZ_KK316828.1 Protein Homology CDS 3251323 3256806 . + 0 ID=cds-WP_031695435.1;Parent=gene-AL55_RS20405;Dbxref=GenBank:WP_031695435.1;Name=WP_031695435.1;gbkey=CDS;gene=ppsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217450.1;locus_tag=AL55_RS20405;product=phthiocerol type I polyketide synthase PpsD;protein_id=WP_031695435.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3256812 3261278 . + . ID=gene-AL55_RS20410;Name=ppsE;gbkey=Gene;gene=ppsE;gene_biotype=protein_coding;locus_tag=AL55_RS20410;old_locus_tag=AL55_03040 NZ_KK316828.1 Protein Homology CDS 3256812 3261278 . + 0 ID=cds-WP_003900602.1;Parent=gene-AL55_RS20410;Dbxref=GenBank:WP_003900602.1;Name=WP_003900602.1;gbkey=CDS;gene=ppsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217451.1;locus_tag=AL55_RS20410;product=phthiocerol type I polyketide synthase PpsE;protein_id=WP_003900602.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3261289 3262284 . + . ID=gene-AL55_RS20415;Name=drrA;gbkey=Gene;gene=drrA;gene_biotype=protein_coding;locus_tag=AL55_RS20415;old_locus_tag=AL55_03041 NZ_KK316828.1 Protein Homology CDS 3261289 3262284 . + 0 ID=cds-WP_003901496.1;Parent=gene-AL55_RS20415;Dbxref=GenBank:WP_003901496.1;Name=WP_003901496.1;gbkey=CDS;gene=drrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217452.1;locus_tag=AL55_RS20415;product=daunorubicin ABC transporter ATP-binding protein DrrA;protein_id=WP_003901496.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3262281 3263150 . + . ID=gene-AL55_RS20420;Name=drrB;gbkey=Gene;gene=drrB;gene_biotype=protein_coding;locus_tag=AL55_RS20420;old_locus_tag=AL55_03042 NZ_KK316828.1 Protein Homology CDS 3262281 3263150 . + 0 ID=cds-WP_003414848.1;Parent=gene-AL55_RS20420;Dbxref=GenBank:WP_003414848.1;Name=WP_003414848.1;gbkey=CDS;gene=drrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217453.1;locus_tag=AL55_RS20420;product=daunorubicin ABC transporter permease DrrB;protein_id=WP_003414848.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3263147 3263977 . + . ID=gene-AL55_RS20425;Name=drrC;gbkey=Gene;gene=drrC;gene_biotype=protein_coding;locus_tag=AL55_RS20425;old_locus_tag=AL55_03043 NZ_KK316828.1 Protein Homology CDS 3263147 3263977 . + 0 ID=cds-WP_003414851.1;Parent=gene-AL55_RS20425;Dbxref=GenBank:WP_003414851.1;Name=WP_003414851.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=drrC;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217454.1;locus_tag=AL55_RS20425;product=ABC transporter permease;protein_id=WP_003414851.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3264024 3265292 . + . ID=gene-AL55_RS20430;Name=AL55_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20430;old_locus_tag=AL55_03044 NZ_KK316828.1 Protein Homology CDS 3264024 3265292 . + 0 ID=cds-WP_003414853.1;Parent=gene-AL55_RS20430;Dbxref=GenBank:WP_003414853.1;Name=WP_003414853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217455.1;locus_tag=AL55_RS20430;product=phthiocerol/phthiodiolone dimycocerosyl transferase;protein_id=WP_003414853.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3265455 3271790 . - . ID=gene-AL55_RS20435;Name=mas;gbkey=Gene;gene=mas;gene_biotype=protein_coding;locus_tag=AL55_RS20435;old_locus_tag=AL55_03045 NZ_KK316828.1 Protein Homology CDS 3265455 3271790 . - 0 ID=cds-WP_003901497.1;Parent=gene-AL55_RS20435;Dbxref=GenBank:WP_003901497.1;Name=WP_003901497.1;gbkey=CDS;gene=mas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217456.1;locus_tag=AL55_RS20435;product=mycocerosate synthase;protein_id=WP_003901497.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3272410 3274152 . + . ID=gene-AL55_RS20440;Name=fadD28;gbkey=Gene;gene=fadD28;gene_biotype=protein_coding;locus_tag=AL55_RS20440;old_locus_tag=AL55_03046 NZ_KK316828.1 Protein Homology CDS 3272410 3274152 . + 0 ID=cds-WP_003905978.1;Parent=gene-AL55_RS20440;Dbxref=GenBank:WP_003905978.1;Name=WP_003905978.1;gbkey=CDS;gene=fadD28;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217457.1;locus_tag=AL55_RS20440;product=fatty-acid--AMP ligase FAAL28/FadD28;protein_id=WP_003905978.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3274145 3276907 . + . ID=gene-AL55_RS20445;Name=mmpL7;gbkey=Gene;gene=mmpL7;gene_biotype=protein_coding;locus_tag=AL55_RS20445;old_locus_tag=AL55_03047 NZ_KK316828.1 Protein Homology CDS 3274145 3276907 . + 0 ID=cds-WP_003414861.1;Parent=gene-AL55_RS20445;Dbxref=GenBank:WP_003414861.1;Name=WP_003414861.1;gbkey=CDS;gene=mmpL7;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217458.1;locus_tag=AL55_RS20445;product=phthiocerol dimycocerosate RND transporter MmpL7;protein_id=WP_003414861.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3277539 3278780 . + . ID=gene-AL55_RS20450;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AL55_RS20450;old_locus_tag=AL55_03048 NZ_KK316828.1 Protein Homology CDS 3277539 3278780 . + 0 ID=cds-WP_003414864.1;Parent=gene-AL55_RS20450;Dbxref=GenBank:WP_003414864.1;Name=WP_003414864.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414864.1;locus_tag=AL55_RS20450;product=IS21-like element ISMbo1 family transposase;protein_id=WP_003414864.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3278780 3279581 . + . ID=gene-AL55_RS0105350;Name=istB;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=AL55_RS0105350;old_locus_tag=AL55_03049;pseudo=true NZ_KK316828.1 Protein Homology CDS 3278780 3279581 . + 0 ID=cds-AL55_RS0105350;Parent=gene-AL55_RS0105350;Note=frameshifted;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_083047449.1;locus_tag=AL55_RS0105350;product=IS21-like element ISMbo1 family helper ATPase IstB;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3279699 3280400 . - . ID=gene-AL55_RS20455;Name=lppX;gbkey=Gene;gene=lppX;gene_biotype=protein_coding;locus_tag=AL55_RS20455;old_locus_tag=AL55_03050 NZ_KK316828.1 Protein Homology CDS 3279699 3280400 . - 0 ID=cds-WP_003414872.1;Parent=gene-AL55_RS20455;Dbxref=GenBank:WP_003414872.1;Name=WP_003414872.1;gbkey=CDS;gene=lppX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217461.1;locus_tag=AL55_RS20455;product=LppX_LprAFG lipoprotein;protein_id=WP_003414872.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3280578 3281159 . - . ID=gene-AL55_RS28260;Name=AL55_RS28260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28260 NZ_KK316828.1 Protein Homology CDS 3280578 3281159 . - 0 ID=cds-WP_434738223.1;Parent=gene-AL55_RS28260;Dbxref=GenBank:WP_434738223.1;Name=WP_434738223.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012759.6;locus_tag=AL55_RS28260;product=acyl carrier protein;protein_id=WP_434738223.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3281195 3284782 . - . ID=gene-AL55_RS27485;Name=AL55_RS27485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27485;old_locus_tag=AL55_03051;partial=true;pseudo=true;start_range=.,3281195 NZ_KK316828.1 Protein Homology CDS 3281195 3284782 . - 0 ID=cds-AL55_RS27485;Parent=gene-AL55_RS27485;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006633,GO:0030639,GO:0034081;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003910413.1;locus_tag=AL55_RS27485;partial=true;product=type I polyketide synthase;pseudo=true;start_range=.,3281195;transl_table=11 NZ_KK316828.1 RefSeq gene 3284800 3286917 . - . ID=gene-AL55_RS20460;Name=AL55_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20460;old_locus_tag=AL55_03052 NZ_KK316828.1 Protein Homology CDS 3284800 3286917 . - 0 ID=cds-WP_003414884.1;Parent=gene-AL55_RS20460;Dbxref=GenBank:WP_003414884.1;Name=WP_003414884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217464.1;locus_tag=AL55_RS20460;product=p-hydroxybenzoic acid--AMP ligase FadD22;protein_id=WP_003414884.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3286934 3287533 . - . ID=gene-AL55_RS20465;Name=AL55_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20465;old_locus_tag=AL55_03053 NZ_KK316828.1 Protein Homology CDS 3286934 3287533 . - 0 ID=cds-WP_003414887.1;Parent=gene-AL55_RS20465;Dbxref=GenBank:WP_003414887.1;Name=WP_003414887.1;Ontology_term=GO:0006744,GO:0008813,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate lyase activity|0008813||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217465.1;locus_tag=AL55_RS20465;product=chorismate--pyruvate lyase family protein;protein_id=WP_003414887.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3287559 3289307 . - . ID=gene-AL55_RS20470;Name=fadD29;gbkey=Gene;gene=fadD29;gene_biotype=protein_coding;gene_synonym=faaL29;locus_tag=AL55_RS20470;old_locus_tag=AL55_03054 NZ_KK316828.1 Protein Homology CDS 3287559 3289307 . - 0 ID=cds-WP_003912041.1;Parent=gene-AL55_RS20470;Dbxref=GenBank:WP_003912041.1;Name=WP_003912041.1;gbkey=CDS;gene=fadD29;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950805.1;locus_tag=AL55_RS20470;product=4-hydroxyphenylalkanoate adenylyltransferase FadD29;protein_id=WP_003912041.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3290066 3291211 . - . ID=gene-AL55_RS20475;Name=AL55_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20475;old_locus_tag=AL55_03055 NZ_KK316828.1 Protein Homology CDS 3290066 3291211 . - 0 ID=cds-WP_003414891.1;Parent=gene-AL55_RS20475;Dbxref=GenBank:WP_003414891.1;Name=WP_003414891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217467.1;locus_tag=AL55_RS20475;product=phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase;protein_id=WP_003414891.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3291404 3292216 . + . ID=gene-AL55_RS20480;Name=AL55_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20480;old_locus_tag=AL55_03056 NZ_KK316828.1 Protein Homology CDS 3291404 3292216 . + 0 ID=cds-WP_003901501.1;Parent=gene-AL55_RS20480;Dbxref=GenBank:WP_003901501.1;Name=WP_003901501.1;Ontology_term=GO:0071770,GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=DIM/DIP cell wall layer assembly|0071770||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217468.1;locus_tag=AL55_RS20480;product=phthiotriol/phenolphthiotriol dimycocerosates methyltransferase;protein_id=WP_003901501.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3292242 3293498 . + . ID=gene-AL55_RS20485;Name=AL55_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20485;old_locus_tag=AL55_03057 NZ_KK316828.1 Protein Homology CDS 3292242 3293498 . + 0 ID=cds-WP_003414903.1;Parent=gene-AL55_RS20485;Dbxref=GenBank:WP_003414903.1;Name=WP_003414903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217469.1;locus_tag=AL55_RS20485;product=trans-acting enoyl reductase;protein_id=WP_003414903.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3293629 3294354 . - . ID=gene-AL55_RS20490;Name=AL55_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20490;old_locus_tag=AL55_03058 NZ_KK316828.1 Protein Homology CDS 3293629 3294354 . - 0 ID=cds-WP_003414905.1;Parent=gene-AL55_RS20490;Dbxref=GenBank:WP_003414905.1;Name=WP_003414905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217470.1;locus_tag=AL55_RS20490;product=[2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 3'''-O-methyltransferase;protein_id=WP_003414905.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3294543 3295508 . - . ID=gene-AL55_RS20495;Name=AL55_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20495;old_locus_tag=AL55_03059 NZ_KK316828.1 Protein Homology CDS 3294543 3295508 . - 0 ID=cds-WP_003414906.1;Parent=gene-AL55_RS20495;Dbxref=GenBank:WP_003414906.1;Name=WP_003414906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217471.1;locus_tag=AL55_RS20495;product=[2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 4'''-O-methyltransferase;protein_id=WP_003414906.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3295631 3296362 . + . ID=gene-AL55_RS20500;Name=AL55_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20500;old_locus_tag=AL55_03060 NZ_KK316828.1 Protein Homology CDS 3295631 3296362 . + 0 ID=cds-WP_003899556.1;Parent=gene-AL55_RS20500;Dbxref=GenBank:WP_003899556.1;Name=WP_003899556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217472.1;locus_tag=AL55_RS20500;product=[alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 2'''-O-methyltransferase;protein_id=WP_003899556.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3296433 3297260 . + . ID=gene-AL55_RS20505;Name=AL55_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20505;old_locus_tag=AL55_03061 NZ_KK316828.1 Protein Homology CDS 3296433 3297260 . + 0 ID=cds-WP_003414909.1;Parent=gene-AL55_RS20505;Dbxref=GenBank:WP_003414909.1;Name=WP_003414909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217473.1;locus_tag=AL55_RS20505;product=PGL/p-HBAD biosynthesis glycosyltransferase;protein_id=WP_003414909.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3297408 3297614 . - . ID=gene-AL55_RS0105360;Name=AL55_RS0105360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105360 NZ_KK316828.1 Protein Homology CDS 3297408 3297614 . - 0 ID=cds-WP_009939955.1;Parent=gene-AL55_RS0105360;Dbxref=GenBank:WP_009939955.1;Name=WP_009939955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939955.1;locus_tag=AL55_RS0105360;product=hypothetical protein;protein_id=WP_009939955.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3297677 3298963 . - . ID=gene-AL55_RS20510;Name=AL55_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20510;old_locus_tag=AL55_03062 NZ_KK316828.1 Protein Homology CDS 3297677 3298963 . - 0 ID=cds-WP_003899557.1;Parent=gene-AL55_RS20510;Dbxref=GenBank:WP_003899557.1;Name=WP_003899557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217474.1;locus_tag=AL55_RS20510;product=PGL/p-HBAD biosynthesis glycosyltransferase;protein_id=WP_003899557.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3299064 3299801 . - . ID=gene-AL55_RS20515;Name=AL55_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20515;old_locus_tag=AL55_03063 NZ_KK316828.1 Protein Homology CDS 3299064 3299801 . - 0 ID=cds-WP_003414919.1;Parent=gene-AL55_RS20515;Dbxref=GenBank:WP_003414919.1;Name=WP_003414919.1;Ontology_term=GO:0071770,GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=DIM/DIP cell wall layer assembly|0071770||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217475.1;locus_tag=AL55_RS20515;product=rhamnosyl O-methyltransferase;protein_id=WP_003414919.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3299916 3300164 . - . ID=gene-AL55_RS20520;Name=AL55_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20520;old_locus_tag=AL55_03064 NZ_KK316828.1 Protein Homology CDS 3299916 3300164 . - 0 ID=cds-WP_003899558.1;Parent=gene-AL55_RS20520;Dbxref=GenBank:WP_003899558.1;Name=WP_003899558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217476.1;locus_tag=AL55_RS20520;product=hypothetical protein;protein_id=WP_003899558.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3300165 3300635 . + . ID=gene-AL55_RS20525;Name=AL55_RS20525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS20525;old_locus_tag=AL55_03065;partial=true;pseudo=true;start_range=.,3300165 NZ_KK316828.1 Protein Homology CDS 3300165 3300635 . + 0 ID=cds-AL55_RS20525;Parent=gene-AL55_RS20525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612244.1;locus_tag=AL55_RS20525;partial=true;product=transposase;pseudo=true;start_range=.,3300165;transl_table=11 NZ_KK316828.1 RefSeq gene 3300736 3302085 . - . ID=gene-AL55_RS20530;Name=AL55_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20530;old_locus_tag=AL55_03066 NZ_KK316828.1 Protein Homology CDS 3300736 3302085 . - 0 ID=cds-WP_003414922.1;Parent=gene-AL55_RS20530;Dbxref=GenBank:WP_003414922.1;Name=WP_003414922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217478.1;locus_tag=AL55_RS20530;product=PGL/p-HBAD biosynthesis rhamnosyltransferase;protein_id=WP_003414922.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3302199 3303419 . + . ID=gene-AL55_RS20535;Name=AL55_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20535;old_locus_tag=AL55_03067 NZ_KK316828.1 Protein Homology CDS 3302199 3303419 . + 0 ID=cds-WP_003414924.1;Parent=gene-AL55_RS20535;Dbxref=GenBank:WP_003414924.1;Name=WP_003414924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217479.1;locus_tag=AL55_RS20535;product=permease;protein_id=WP_003414924.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3303492 3304424 . + . ID=gene-AL55_RS20540;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AL55_RS20540;old_locus_tag=AL55_03068 NZ_KK316828.1 Protein Homology CDS 3303492 3304424 . + 0 ID=cds-WP_003901503.1;Parent=gene-AL55_RS20540;Dbxref=GenBank:WP_003901503.1;Name=WP_003901503.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217480.1;locus_tag=AL55_RS20540;product=formyltetrahydrofolate deformylase;protein_id=WP_003901503.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3304610 3304742 . + . ID=gene-AL55_RS28265;Name=AL55_RS28265;end_range=3304742,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28265;partial=true;pseudo=true;start_range=.,3304610 NZ_KK316828.1 Protein Homology CDS 3304610 3304742 . + 0 ID=cds-AL55_RS28265;Parent=gene-AL55_RS28265;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3304742,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=AL55_RS28265;partial=true;product=ISL3-like element ISAar34 family transposase;pseudo=true;start_range=.,3304610;transl_table=11 NZ_KK316828.1 RefSeq gene 3305064 3305249 . + . ID=gene-AL55_RS20545;Name=AL55_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20545;old_locus_tag=AL55_03069 NZ_KK316828.1 Protein Homology CDS 3305064 3305249 . + 0 ID=cds-WP_003414994.1;Parent=gene-AL55_RS20545;Dbxref=GenBank:WP_003414994.1;Name=WP_003414994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414994.1;locus_tag=AL55_RS20545;product=hypothetical protein;protein_id=WP_003414994.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3305293 3305778 . - . ID=gene-AL55_RS20550;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AL55_RS20550;old_locus_tag=AL55_03070 NZ_KK316828.1 Protein Homology CDS 3305293 3305778 . - 0 ID=cds-WP_003414998.1;Parent=gene-AL55_RS20550;Dbxref=GenBank:WP_003414998.1;Name=WP_003414998.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217481.1;locus_tag=AL55_RS20550;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_003414998.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3305864 3306430 . - . ID=gene-AL55_RS20555;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=AL55_RS20555;old_locus_tag=AL55_03071 NZ_KK316828.1 Protein Homology CDS 3305864 3306430 . - 0 ID=cds-WP_003415001.1;Parent=gene-AL55_RS20555;Dbxref=GenBank:WP_003415001.1;Name=WP_003415001.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217482.1;locus_tag=AL55_RS20555;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_003415001.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3306429 3306531 . - . ID=gene-AL55_RS28270;Name=AL55_RS28270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28270;partial=true;pseudo=true;start_range=.,3306429 NZ_KK316828.1 Protein Homology CDS 3306429 3306531 . - 0 ID=cds-AL55_RS28270;Parent=gene-AL55_RS28270;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=AL55_RS28270;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3306429;transl_table=11 NZ_KK316828.1 RefSeq gene 3306626 3310009 . - . ID=gene-AL55_RS20560;Name=pca;gbkey=Gene;gene=pca;gene_biotype=protein_coding;locus_tag=AL55_RS20560;old_locus_tag=AL55_03072 NZ_KK316828.1 Protein Homology CDS 3306626 3310009 . - 0 ID=cds-WP_003415003.1;Parent=gene-AL55_RS20560;Dbxref=GenBank:WP_003415003.1;Name=WP_003415003.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;gene=pca;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217483.1;locus_tag=AL55_RS20560;product=pyruvate carboxylase;protein_id=WP_003415003.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3310034 3310666 . - . ID=gene-AL55_RS20565;Name=AL55_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20565;old_locus_tag=AL55_03073 NZ_KK316828.1 Protein Homology CDS 3310034 3310666 . - 0 ID=cds-WP_003415007.1;Parent=gene-AL55_RS20565;Dbxref=GenBank:WP_003415007.1;Name=WP_003415007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217484.1;locus_tag=AL55_RS20565;product=vitamin K epoxide reductase family protein;protein_id=WP_003415007.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3310672 3311439 . - . ID=gene-AL55_RS20570;Name=AL55_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20570;old_locus_tag=AL55_03074 NZ_KK316828.1 Protein Homology CDS 3310672 3311439 . - 0 ID=cds-WP_003415010.1;Parent=gene-AL55_RS20570;Dbxref=GenBank:WP_003415010.1;Name=WP_003415010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217485.1;locus_tag=AL55_RS20570;product=mycothiol-dependent reductase;protein_id=WP_003415010.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3311536 3312666 . - . ID=gene-AL55_RS20575;Name=lipN;gbkey=Gene;gene=lipN;gene_biotype=protein_coding;locus_tag=AL55_RS20575;old_locus_tag=AL55_03075 NZ_KK316828.1 Protein Homology CDS 3311536 3312666 . - 0 ID=cds-WP_003415015.1;Parent=gene-AL55_RS20575;Dbxref=GenBank:WP_003415015.1;Name=WP_003415015.1;gbkey=CDS;gene=lipN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217486.1;locus_tag=AL55_RS20575;product=lipase/esterase LipN;protein_id=WP_003415015.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3312864 3313057 . + . ID=gene-AL55_RS20580;Name=AL55_RS20580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS20580;old_locus_tag=AL55_03076;partial=true;pseudo=true;start_range=.,3312864 NZ_KK316828.1 Protein Homology CDS 3312864 3313057 . + 0 ID=cds-AL55_RS20580;Parent=gene-AL55_RS20580;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019735927.1;locus_tag=AL55_RS20580;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,3312864;transl_table=11 NZ_KK316828.1 RefSeq gene 3313064 3313912 . + . ID=gene-AL55_RS20585;Name=AL55_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20585;old_locus_tag=AL55_03077 NZ_KK316828.1 Protein Homology CDS 3313064 3313912 . + 0 ID=cds-WP_003415022.1;Parent=gene-AL55_RS20585;Dbxref=GenBank:WP_003415022.1;Name=WP_003415022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217487.1;locus_tag=AL55_RS20585;product=aldo/keto reductase;protein_id=WP_003415022.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3313986 3314699 . - . ID=gene-AL55_RS20590;Name=AL55_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20590;old_locus_tag=AL55_03078 NZ_KK316828.1 Protein Homology CDS 3313986 3314699 . - 0 ID=cds-WP_003415024.1;Parent=gene-AL55_RS20590;Dbxref=GenBank:WP_003415024.1;Name=WP_003415024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217488.1;locus_tag=AL55_RS20590;product=HNH endonuclease family protein;protein_id=WP_003415024.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3314696 3316909 . - . ID=gene-AL55_RS20595;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=AL55_RS20595;old_locus_tag=AL55_03079 NZ_KK316828.1 Protein Homology CDS 3314696 3316909 . - 0 ID=cds-WP_003415026.1;Parent=gene-AL55_RS20595;Dbxref=GenBank:WP_003415026.1;Name=WP_003415026.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678;gbkey=CDS;gene=recG;go_function=DNA helicase activity|0003678||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217489.1;locus_tag=AL55_RS20595;product=ATP-dependent DNA helicase RecG;protein_id=WP_003415026.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3316912 3318573 . - . ID=gene-AL55_RS20600;Name=AL55_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20600;old_locus_tag=AL55_03080 NZ_KK316828.1 Protein Homology CDS 3316912 3318573 . - 0 ID=cds-WP_003902383.1;Parent=gene-AL55_RS20600;Dbxref=GenBank:WP_003902383.1;Name=WP_003902383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902383.1;locus_tag=AL55_RS20600;product=DAK2 domain-containing protein;protein_id=WP_003902383.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3318815 3319009 . + . ID=gene-AL55_RS20605;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AL55_RS20605;old_locus_tag=AL55_03082 NZ_KK316828.1 Protein Homology CDS 3318815 3319009 . + 0 ID=cds-WP_003415030.1;Parent=gene-AL55_RS20605;Dbxref=GenBank:WP_003415030.1;Name=WP_003415030.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030042.1;locus_tag=AL55_RS20605;product=50S ribosomal protein L28;protein_id=WP_003415030.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3319032 3319715 . - . ID=gene-AL55_RS20610;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AL55_RS20610;old_locus_tag=AL55_03083 NZ_KK316828.1 Protein Homology CDS 3319032 3319715 . - 0 ID=cds-WP_003899565.1;Parent=gene-AL55_RS20610;Dbxref=GenBank:WP_003899565.1;Name=WP_003899565.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217492.1;locus_tag=AL55_RS20610;product=uracil-DNA glycosylase;protein_id=WP_003899565.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3319748 3320749 . - . ID=gene-AL55_RS20615;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=AL55_RS20615;old_locus_tag=AL55_03084 NZ_KK316828.1 Protein Homology CDS 3319748 3320749 . - 0 ID=cds-WP_003415034.1;Parent=gene-AL55_RS20615;Dbxref=GenBank:WP_003415034.1;Name=WP_003415034.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217493.1;locus_tag=AL55_RS20615;product=thiamine-phosphate kinase;protein_id=WP_003415034.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3320746 3322125 . - . ID=gene-AL55_RS20620;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AL55_RS20620;old_locus_tag=AL55_03085 NZ_KK316828.1 Protein Homology CDS 3320746 3322125 . - 0 ID=cds-WP_003415037.1;Parent=gene-AL55_RS20620;Dbxref=GenBank:WP_003415037.1;Name=WP_003415037.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217494.1;locus_tag=AL55_RS20620;product=IS607 family element RNA-guided endonuclease TnpB;protein_id=WP_003415037.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3322125 3322709 . - . ID=gene-AL55_RS20625;Name=AL55_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20625;old_locus_tag=AL55_03086 NZ_KK316828.1 Protein Homology CDS 3322125 3322709 . - 0 ID=cds-WP_003415039.1;Parent=gene-AL55_RS20625;Dbxref=GenBank:WP_003415039.1;Name=WP_003415039.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217495.1;locus_tag=AL55_RS20625;product=IS607 family transposase;protein_id=WP_003415039.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3322921 3323466 . + . ID=gene-AL55_RS20630;Name=AL55_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20630;old_locus_tag=AL55_03087 NZ_KK316828.1 Protein Homology CDS 3322921 3323466 . + 0 ID=cds-WP_003415041.1;Parent=gene-AL55_RS20630;Dbxref=GenBank:WP_003415041.1;Name=WP_003415041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217496.1;locus_tag=AL55_RS20630;product=DUF3515 domain-containing protein;protein_id=WP_003415041.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3323580 3324701 . - . ID=gene-AL55_RS20635;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=AL55_RS20635;old_locus_tag=AL55_03088 NZ_KK316828.1 Protein Homology CDS 3323580 3324701 . - 0 ID=cds-WP_003415088.1;Parent=gene-AL55_RS20635;Dbxref=GenBank:WP_003415088.1;Name=WP_003415088.1;gbkey=CDS;gene=ddlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217497.1;locus_tag=AL55_RS20635;product=D-alanine--D-alanine ligase DdlA;protein_id=WP_003415088.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3324779 3325783 . - . ID=gene-AL55_RS20640;Name=AL55_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20640;old_locus_tag=AL55_03089 NZ_KK316828.1 Protein Homology CDS 3324779 3325783 . - 0 ID=cds-WP_003415091.1;Parent=gene-AL55_RS20640;Dbxref=GenBank:WP_003415091.1;Name=WP_003415091.1;Ontology_term=GO:0046167,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate biosynthetic process|0046167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217498.1;locus_tag=AL55_RS20640;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_003415091.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3325902 3326546 . + . ID=gene-AL55_RS20645;Name=cofC;gbkey=Gene;gene=cofC;gene_biotype=protein_coding;locus_tag=AL55_RS20645;old_locus_tag=AL55_03090 NZ_KK316828.1 Protein Homology CDS 3325902 3326546 . + 0 ID=cds-WP_003415094.1;Parent=gene-AL55_RS20645;Dbxref=GenBank:WP_003415094.1;Name=WP_003415094.1;Ontology_term=GO:0043814;gbkey=CDS;gene=cofC;go_function=phospholactate guanylyltransferase activity|0043814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217499.1;locus_tag=AL55_RS20645;product=2-phospho-L-lactate guanylyltransferase;protein_id=WP_003415094.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3326638 3328866 . + . ID=gene-AL55_RS20650;Name=AL55_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20650;old_locus_tag=AL55_03091 NZ_KK316828.1 Protein Homology CDS 3326638 3328866 . + 0 ID=cds-WP_003415097.1;Parent=gene-AL55_RS20650;Dbxref=GenBank:WP_003415097.1;Name=WP_003415097.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217500.1;locus_tag=AL55_RS20650;product=RNA degradosome polyphosphate kinase;protein_id=WP_003415097.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3328949 3329902 . + . ID=gene-AL55_RS20655;Name=AL55_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20655;old_locus_tag=AL55_03092 NZ_KK316828.1 Protein Homology CDS 3328949 3329902 . + 0 ID=cds-WP_003899569.1;Parent=gene-AL55_RS20655;Dbxref=GenBank:WP_003899569.1;Name=WP_003899569.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217501.1;locus_tag=AL55_RS20655;product=8-oxo-(d)GTP phosphatase MutT1;protein_id=WP_003899569.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3329960 3330604 . - . ID=gene-AL55_RS20660;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=AL55_RS20660;old_locus_tag=AL55_03093 NZ_KK316828.1 Protein Homology CDS 3329960 3330604 . - 0 ID=cds-WP_003415107.1;Parent=gene-AL55_RS20660;Dbxref=GenBank:WP_003415107.1;Name=WP_003415107.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217502.1;locus_tag=AL55_RS20660;product=DNA-binding protein HupB;protein_id=WP_003415107.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3330817 3331413 . - . ID=gene-AL55_RS20665;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AL55_RS20665;old_locus_tag=AL55_03094 NZ_KK316828.1 Protein Homology CDS 3330817 3331413 . - 0 ID=cds-WP_003415110.1;Parent=gene-AL55_RS20665;Dbxref=GenBank:WP_003415110.1;Name=WP_003415110.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217503.1;locus_tag=AL55_RS20665;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_003415110.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3331438 3332859 . - . ID=gene-AL55_RS20670;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=AL55_RS20670;old_locus_tag=AL55_03095 NZ_KK316828.1 Protein Homology CDS 3331438 3332859 . - 0 ID=cds-WP_003899570.1;Parent=gene-AL55_RS20670;Dbxref=GenBank:WP_003899570.1;Name=WP_003899570.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217504.1;locus_tag=AL55_RS20670;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_003899570.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3332931 3333632 . + . ID=gene-AL55_RS20675;Name=AL55_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20675;old_locus_tag=AL55_03096 NZ_KK316828.1 Protein Homology CDS 3332931 3333632 . + 0 ID=cds-WP_003415115.1;Parent=gene-AL55_RS20675;Dbxref=GenBank:WP_003415115.1;Name=WP_003415115.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217505.1;locus_tag=AL55_RS20675;product=IclR family transcriptional regulator;protein_id=WP_003415115.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3333643 3334503 . - . ID=gene-AL55_RS20680;Name=AL55_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20680;old_locus_tag=AL55_03097 NZ_KK316828.1 Protein Homology CDS 3333643 3334503 . - 0 ID=cds-WP_003415118.1;Parent=gene-AL55_RS20680;Dbxref=GenBank:WP_003415118.1;Name=WP_003415118.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217506.1;locus_tag=AL55_RS20680;product=class I SAM-dependent methyltransferase;protein_id=WP_003415118.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3334766 3335257 . + . ID=gene-AL55_RS20685;Name=AL55_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20685;old_locus_tag=AL55_03098 NZ_KK316828.1 Protein Homology CDS 3334766 3335257 . + 0 ID=cds-WP_003899572.1;Parent=gene-AL55_RS20685;Dbxref=GenBank:WP_003899572.1;Name=WP_003899572.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217507.1;locus_tag=AL55_RS20685;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003899572.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3335331 3335403 . - . ID=gene-AL55_RS20690;Name=AL55_RS20690;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS20690;old_locus_tag=AL55_03099 NZ_KK316828.1 tRNAscan-SE tRNA 3335331 3335403 . - . ID=rna-AL55_RS20690;Parent=gene-AL55_RS20690;anticodon=(pos:complement(3335367..3335369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS20690;product=tRNA-Glu NZ_KK316828.1 tRNAscan-SE exon 3335331 3335403 . - . ID=exon-AL55_RS20690-1;Parent=rna-AL55_RS20690;anticodon=(pos:complement(3335367..3335369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS20690;product=tRNA-Glu NZ_KK316828.1 RefSeq gene 3335443 3335514 . - . ID=gene-AL55_RS20695;Name=AL55_RS20695;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS20695;old_locus_tag=AL55_03100 NZ_KK316828.1 tRNAscan-SE tRNA 3335443 3335514 . - . ID=rna-AL55_RS20695;Parent=gene-AL55_RS20695;anticodon=(pos:complement(3335479..3335481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS20695;product=tRNA-Gln NZ_KK316828.1 tRNAscan-SE exon 3335443 3335514 . - . ID=exon-AL55_RS20695-1;Parent=rna-AL55_RS20695;anticodon=(pos:complement(3335479..3335481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS20695;product=tRNA-Gln NZ_KK316828.1 RefSeq gene 3335589 3337061 . - . ID=gene-AL55_RS20700;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AL55_RS20700;old_locus_tag=AL55_03101 NZ_KK316828.1 Protein Homology CDS 3335589 3337061 . - 0 ID=cds-WP_003415122.1;Parent=gene-AL55_RS20700;Dbxref=GenBank:WP_003415122.1;Name=WP_003415122.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177915.1;locus_tag=AL55_RS20700;product=glutamate--tRNA ligase;protein_id=WP_003415122.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3337058 3337855 . - . ID=gene-AL55_RS20705;Name=AL55_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20705;old_locus_tag=AL55_03102 NZ_KK316828.1 Protein Homology CDS 3337058 3337855 . - 0 ID=cds-WP_003415138.1;Parent=gene-AL55_RS20705;Dbxref=GenBank:WP_003415138.1;Name=WP_003415138.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003415138.1;locus_tag=AL55_RS20705;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_003415138.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3338095 3339108 . + . ID=gene-AL55_RS20710;Name=AL55_RS20710;end_range=3339108,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS20710;old_locus_tag=AL55_03103;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 3338095 3339108 . + 0 ID=cds-AL55_RS20710;Parent=gene-AL55_RS20710;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=3339108,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=AL55_RS20710;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3339242 3340252 . - . ID=gene-AL55_RS26435;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=AL55_RS26435;old_locus_tag=AL55_03104 NZ_KK316828.1 Protein Homology CDS 3339242 3340252 . - 0 ID=cds-WP_003899576.1;Parent=gene-AL55_RS26435;Dbxref=GenBank:WP_003899576.1;Name=WP_003899576.1;Ontology_term=GO:0009098,GO:0000287,GO:0003862,GO:0051287;gbkey=CDS;gene=leuB;go_function=magnesium ion binding|0000287||IEA,3-isopropylmalate dehydrogenase activity|0003862||IEA,NAD binding|0051287||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217511.1;locus_tag=AL55_RS26435;product=3-isopropylmalate dehydrogenase;protein_id=WP_003899576.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3340267 3341853 . - . ID=gene-AL55_RS20715;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AL55_RS20715;old_locus_tag=AL55_03105 NZ_KK316828.1 Protein Homology CDS 3340267 3341853 . - 0 ID=cds-WP_003899578.1;Parent=gene-AL55_RS20715;Dbxref=GenBank:WP_003899578.1;Name=WP_003899578.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177916.1;locus_tag=AL55_RS20715;product=phosphoglycerate dehydrogenase;protein_id=WP_003899578.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3341883 3343325 . + . ID=gene-AL55_RS20720;Name=AL55_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20720;old_locus_tag=AL55_03106 NZ_KK316828.1 Protein Homology CDS 3341883 3343325 . + 0 ID=cds-WP_003415150.1;Parent=gene-AL55_RS20720;Dbxref=GenBank:WP_003415150.1;Name=WP_003415150.1;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217513.1;locus_tag=AL55_RS20720;product=phytoene desaturase family protein;protein_id=WP_003415150.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3343517 3343717 . - . ID=gene-AL55_RS0105370;Name=AL55_RS0105370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105370 NZ_KK316828.1 Protein Homology CDS 3343517 3343717 . - 0 ID=cds-WP_003900610.1;Parent=gene-AL55_RS0105370;Dbxref=GenBank:WP_003900610.1;Name=WP_003900610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908129.1;locus_tag=AL55_RS0105370;product=DUF433 domain-containing protein;protein_id=WP_003900610.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3343647 3344060 . + . ID=gene-AL55_RS27785;Name=AL55_RS27785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27785;old_locus_tag=AL55_03107 NZ_KK316828.1 Protein Homology CDS 3343647 3344060 . + 0 ID=cds-WP_223695529.1;Parent=gene-AL55_RS27785;Dbxref=GenBank:WP_223695529.1;Name=WP_223695529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217514.1;locus_tag=AL55_RS27785;product=hypothetical protein;protein_id=WP_223695529.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3344009 3344203 . - . ID=gene-AL55_RS27790;Name=AL55_RS27790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27790;old_locus_tag=AL55_03108 NZ_KK316828.1 Protein Homology CDS 3344009 3344203 . - 0 ID=cds-WP_229298038.1;Parent=gene-AL55_RS27790;Dbxref=GenBank:WP_229298038.1;Name=WP_229298038.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012876.6;locus_tag=AL55_RS27790;product=hypothetical protein;protein_id=WP_229298038.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3344386 3345351 . + . ID=gene-AL55_RS20730;Name=lppY;gbkey=Gene;gene=lppY;gene_biotype=protein_coding;locus_tag=AL55_RS20730;old_locus_tag=AL55_03109 NZ_KK316828.1 Protein Homology CDS 3344386 3345351 . + 0 ID=cds-WP_003901513.1;Parent=gene-AL55_RS20730;Dbxref=GenBank:WP_003901513.1;Name=WP_003901513.1;gbkey=CDS;gene=lppY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217515.1;locus_tag=AL55_RS20730;product=DUF1259 domain-containing protein;protein_id=WP_003901513.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3345396 3346055 . + . ID=gene-AL55_RS20735;Name=AL55_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20735;old_locus_tag=AL55_03110 NZ_KK316828.1 Protein Homology CDS 3345396 3346055 . + 0 ID=cds-WP_003415160.1;Parent=gene-AL55_RS20735;Dbxref=GenBank:WP_003415160.1;Name=WP_003415160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217516.1;locus_tag=AL55_RS20735;product=ABC transporter permease;protein_id=WP_003415160.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3346369 3347370 . - . ID=gene-AL55_RS20740;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AL55_RS20740;old_locus_tag=AL55_03111 NZ_KK316828.1 Protein Homology CDS 3346369 3347370 . - 0 ID=cds-WP_003899581.1;Parent=gene-AL55_RS20740;Dbxref=GenBank:WP_003899581.1;Name=WP_003899581.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217517.3;locus_tag=AL55_RS20740;product=ketol-acid reductoisomerase;protein_id=WP_003899581.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3347408 3347914 . - . ID=gene-AL55_RS20745;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AL55_RS20745;old_locus_tag=AL55_03112 NZ_KK316828.1 Protein Homology CDS 3347408 3347914 . - 0 ID=cds-WP_003415167.1;Parent=gene-AL55_RS20745;Dbxref=GenBank:WP_003415167.1;Name=WP_003415167.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217518.1;locus_tag=AL55_RS20745;product=acetolactate synthase small subunit;protein_id=WP_003415167.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3347914 3349770 . - . ID=gene-AL55_RS20750;Name=AL55_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20750;old_locus_tag=AL55_03113 NZ_KK316828.1 Protein Homology CDS 3347914 3349770 . - 0 ID=cds-WP_003415168.1;Parent=gene-AL55_RS20750;Dbxref=GenBank:WP_003415168.1;Name=WP_003415168.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177917.1;locus_tag=AL55_RS20750;product=acetolactate synthase large subunit;protein_id=WP_003415168.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3350093 3350470 . + . ID=gene-AL55_RS20755;Name=AL55_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20755;old_locus_tag=AL55_03114 NZ_KK316828.1 Protein Homology CDS 3350093 3350470 . + 0 ID=cds-WP_003900612.1;Parent=gene-AL55_RS20755;Dbxref=GenBank:WP_003900612.1;Name=WP_003900612.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900612.1;locus_tag=AL55_RS20755;product=PH domain-containing protein;protein_id=WP_003900612.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3350477 3351316 . - . ID=gene-AL55_RS20760;Name=AL55_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20760;old_locus_tag=AL55_03115 NZ_KK316828.1 Protein Homology CDS 3350477 3351316 . - 0 ID=cds-WP_003415171.1;Parent=gene-AL55_RS20760;Dbxref=GenBank:WP_003415171.1;Name=WP_003415171.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217521.1;locus_tag=AL55_RS20760;product=DoxX family protein;protein_id=WP_003415171.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3351493 3352614 . + . ID=gene-AL55_RS20765;Name=lppZ;gbkey=Gene;gene=lppZ;gene_biotype=protein_coding;locus_tag=AL55_RS20765;old_locus_tag=AL55_03116 NZ_KK316828.1 Protein Homology CDS 3351493 3352614 . + 0 ID=cds-WP_003415173.1;Parent=gene-AL55_RS20765;Dbxref=GenBank:WP_003415173.1;Name=WP_003415173.1;gbkey=CDS;gene=lppZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217522.1;locus_tag=AL55_RS20765;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_003415173.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3352620 3353234 . - . ID=gene-AL55_RS20770;Name=AL55_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20770;old_locus_tag=AL55_03117 NZ_KK316828.1 Protein Homology CDS 3352620 3353234 . - 0 ID=cds-WP_003415174.1;Parent=gene-AL55_RS20770;Dbxref=GenBank:WP_003415174.1;Name=WP_003415174.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217523.1;locus_tag=AL55_RS20770;product=flavin reductase family protein;protein_id=WP_003415174.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3353428 3354051 . + . ID=gene-AL55_RS20775;Name=AL55_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20775;old_locus_tag=AL55_03118 NZ_KK316828.1 Protein Homology CDS 3353428 3354051 . + 0 ID=cds-WP_003899584.1;Parent=gene-AL55_RS20775;Dbxref=GenBank:WP_003899584.1;Name=WP_003899584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217524.1;locus_tag=AL55_RS20775;product=MgtC/SapB family protein;protein_id=WP_003899584.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3354048 3355577 . - . ID=gene-AL55_RS20780;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=AL55_RS20780;old_locus_tag=AL55_03119 NZ_KK316828.1 Protein Homology CDS 3354048 3355577 . - 0 ID=cds-WP_003415248.1;Parent=gene-AL55_RS20780;Dbxref=GenBank:WP_003415248.1;Name=WP_003415248.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217525.1;locus_tag=AL55_RS20780;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_003415248.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3355607 3356638 . - . ID=gene-AL55_RS20785;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=AL55_RS20785;old_locus_tag=AL55_03120 NZ_KK316828.1 Protein Homology CDS 3355607 3356638 . - 0 ID=cds-WP_003415251.1;Parent=gene-AL55_RS20785;Dbxref=GenBank:WP_003415251.1;Name=WP_003415251.1;Ontology_term=GO:0006002,GO:0003872,GO:0005524,GO:0046872;gbkey=CDS;gene=pfkA;go_function=6-phosphofructokinase activity|0003872||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217526.1;locus_tag=AL55_RS20785;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_003415251.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3356734 3358218 . - . ID=gene-AL55_RS20790;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=AL55_RS20790;old_locus_tag=AL55_03121 NZ_KK316828.1 Protein Homology CDS 3356734 3358218 . - 0 ID=cds-WP_003900613.1;Parent=gene-AL55_RS20790;Dbxref=GenBank:WP_003900613.1;Name=WP_003900613.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217527.2;locus_tag=AL55_RS20790;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_003900613.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3358215 3358514 . - . ID=gene-AL55_RS20795;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=AL55_RS20795;old_locus_tag=AL55_03122 NZ_KK316828.1 Protein Homology CDS 3358215 3358514 . - 0 ID=cds-WP_003415256.1;Parent=gene-AL55_RS20795;Dbxref=GenBank:WP_003415256.1;Name=WP_003415256.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217528.1;locus_tag=AL55_RS20795;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_003415256.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3358599 3359255 . + . ID=gene-AL55_RS20800;Name=AL55_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20800;old_locus_tag=AL55_03123 NZ_KK316828.1 Protein Homology CDS 3358599 3359255 . + 0 ID=cds-WP_003901515.1;Parent=gene-AL55_RS20800;Dbxref=GenBank:WP_003901515.1;Name=WP_003901515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217529.1;locus_tag=AL55_RS20800;product=ACT domain-containing protein;protein_id=WP_003901515.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3359329 3361404 . - . ID=gene-AL55_RS20805;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AL55_RS20805;old_locus_tag=AL55_03124 NZ_KK316828.1 Protein Homology CDS 3359329 3361404 . - 0 ID=cds-WP_003415263.1;Parent=gene-AL55_RS20805;Dbxref=GenBank:WP_003415263.1;Name=WP_003415263.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217530.1;locus_tag=AL55_RS20805;product=NAD-dependent DNA ligase LigA;protein_id=WP_003415263.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3361435 3362448 . - . ID=gene-AL55_RS20810;Name=AL55_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20810;old_locus_tag=AL55_03125 NZ_KK316828.1 Protein Homology CDS 3361435 3362448 . - 0 ID=cds-WP_003902392.1;Parent=gene-AL55_RS20810;Dbxref=GenBank:WP_003902392.1;Name=WP_003902392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217531.1;locus_tag=AL55_RS20810;product=uroporphyrinogen decarboxylase/cobalamine-independent methonine synthase family protein;protein_id=WP_003902392.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3362542 3363171 . + . ID=gene-AL55_RS20815;Name=lpqA;gbkey=Gene;gene=lpqA;gene_biotype=protein_coding;locus_tag=AL55_RS20815;old_locus_tag=AL55_03126 NZ_KK316828.1 Protein Homology CDS 3362542 3363171 . + 0 ID=cds-WP_003415270.1;Parent=gene-AL55_RS20815;Dbxref=GenBank:WP_003415270.1;Name=WP_003415270.1;gbkey=CDS;gene=lpqA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217532.1;locus_tag=AL55_RS20815;product=sensor domain-containing protein;protein_id=WP_003415270.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3363274 3363636 . - . ID=gene-AL55_RS20820;Name=esxQ;gbkey=Gene;gene=esxQ;gene_biotype=protein_coding;locus_tag=AL55_RS20820;old_locus_tag=AL55_03127 NZ_KK316828.1 Protein Homology CDS 3363274 3363636 . - 0 ID=cds-WP_003415272.1;Parent=gene-AL55_RS20820;Dbxref=GenBank:WP_003415272.1;Name=WP_003415272.1;gbkey=CDS;gene=esxQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217533.1;locus_tag=AL55_RS20820;product=type VII secretion system ESX-3 effector EsxQ;protein_id=WP_003415272.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3363723 3365027 . - . ID=gene-AL55_RS20825;Name=AL55_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20825;old_locus_tag=AL55_03128 NZ_KK316828.1 Protein Homology CDS 3363723 3365027 . - 0 ID=cds-WP_003910691.1;Parent=gene-AL55_RS20825;Dbxref=GenBank:WP_003910691.1;Name=WP_003910691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177918.1;locus_tag=AL55_RS20825;product=PPE family protein;protein_id=WP_003910691.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3365116 3365199 . - . ID=gene-AL55_RS27795;Name=AL55_RS27795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27795;old_locus_tag=AL55_03129;partial=true;pseudo=true;start_range=.,3365116 NZ_KK316828.1 Protein Homology CDS 3365116 3365199 . - 0 ID=cds-AL55_RS27795;Parent=gene-AL55_RS27795;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177685.1;locus_tag=AL55_RS27795;partial=true;product=type VII secretion system ESX-3 target PE5;pseudo=true;start_range=.,3365116;transl_table=11 NZ_KK316828.1 RefSeq gene 3365380 3366641 . - . ID=gene-AL55_RS20830;Name=AL55_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20830;old_locus_tag=AL55_03130 NZ_KK316828.1 Protein Homology CDS 3366353 3366641 . - 0 ID=cds-WP_087902221.1-11;Parent=gene-AL55_RS20830;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS20830;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 3365380 3366353 . - 2 ID=cds-WP_087902221.1-11;Parent=gene-AL55_RS20830;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS20830;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3367213 3368474 . + . ID=gene-AL55_RS20845;Name=AL55_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20845;old_locus_tag=AL55_03133 NZ_KK316828.1 Protein Homology CDS 3367213 3367501 . + 0 ID=cds-WP_087902221.1-12;Parent=gene-AL55_RS20845;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS20845;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 3367501 3368474 . + 2 ID=cds-WP_087902221.1-12;Parent=gene-AL55_RS20845;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS20845;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3368528 3368821 . - . ID=gene-AL55_RS20850;Name=esxG;gbkey=Gene;gene=esxG;gene_biotype=protein_coding;locus_tag=AL55_RS20850;old_locus_tag=AL55_03134 NZ_KK316828.1 Protein Homology CDS 3368528 3368821 . - 0 ID=cds-WP_003415342.1;Parent=gene-AL55_RS20850;Dbxref=GenBank:WP_003415342.1;Name=WP_003415342.1;gbkey=CDS;gene=esxG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177919.1;locus_tag=AL55_RS20850;product=type VII secretion system protein EsxG;protein_id=WP_003415342.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3368868 3370175 . - . ID=gene-AL55_RS20855;Name=AL55_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20855;old_locus_tag=AL55_03135 NZ_KK316828.1 Protein Homology CDS 3368868 3370175 . - 0 ID=cds-WP_010950814.1;Parent=gene-AL55_RS20855;Dbxref=GenBank:WP_010950814.1;Name=WP_010950814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330432.1;locus_tag=AL55_RS20855;product=PPE family protein;protein_id=WP_010950814.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3370172 3370486 . - . ID=gene-AL55_RS20860;Name=AL55_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20860;old_locus_tag=AL55_03136 NZ_KK316828.1 Protein Homology CDS 3370172 3370486 . - 0 ID=cds-WP_003415766.1;Parent=gene-AL55_RS20860;Dbxref=GenBank:WP_003415766.1;Name=WP_003415766.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177685.1;locus_tag=AL55_RS20860;product=PE family protein;protein_id=WP_003415766.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3370868 3372115 . - . ID=gene-AL55_RS20865;Name=AL55_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20865;old_locus_tag=AL55_03137 NZ_KK316828.1 Protein Homology CDS 3370868 3372115 . - 0 ID=cds-WP_003901078.1-4;Parent=gene-AL55_RS20865;Dbxref=GenBank:WP_003901078.1;Name=WP_003901078.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL55_RS20865;product=IS256-like element IS1081 family transposase;protein_id=WP_003901078.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3372278 3373381 . - . ID=gene-AL55_RS20870;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=AL55_RS20870;old_locus_tag=AL55_03138 NZ_KK316828.1 Protein Homology CDS 3372278 3373381 . - 0 ID=cds-WP_003415909.1;Parent=gene-AL55_RS20870;Dbxref=GenBank:WP_003415909.1;Name=WP_003415909.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217540.1;locus_tag=AL55_RS20870;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_003415909.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3373378 3374559 . - . ID=gene-AL55_RS20875;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AL55_RS20875;old_locus_tag=AL55_03139 NZ_KK316828.1 Protein Homology CDS 3373378 3374559 . - 0 ID=cds-WP_003415911.1;Parent=gene-AL55_RS20875;Dbxref=GenBank:WP_003415911.1;Name=WP_003415911.1;Ontology_term=GO:0030170;gbkey=CDS;gene=iscS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217541.1;locus_tag=AL55_RS20875;product=cysteine desulfurase family protein;protein_id=WP_003415911.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3374656 3375570 . - . ID=gene-AL55_RS20880;Name=AL55_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20880;old_locus_tag=AL55_03140 NZ_KK316828.1 Protein Homology CDS 3374656 3375570 . - 0 ID=cds-WP_003415914.1;Parent=gene-AL55_RS20880;Dbxref=GenBank:WP_003415914.1;Name=WP_003415914.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217542.1;locus_tag=AL55_RS20880;product=lysophospholipid acyltransferase family protein;protein_id=WP_003415914.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3375567 3376412 . - . ID=gene-AL55_RS20885;Name=AL55_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20885;old_locus_tag=AL55_03141 NZ_KK316828.1 Protein Homology CDS 3375567 3376412 . - 0 ID=cds-WP_003900617.1;Parent=gene-AL55_RS20885;Dbxref=GenBank:WP_003900617.1;Name=WP_003900617.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217543.2;locus_tag=AL55_RS20885;product=GNAT family N-acetyltransferase;protein_id=WP_003900617.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3376568 3377524 . - . ID=gene-AL55_RS20890;Name=fixB;gbkey=Gene;gene=fixB;gene_biotype=protein_coding;locus_tag=AL55_RS20890;old_locus_tag=AL55_03142 NZ_KK316828.1 Protein Homology CDS 3376568 3377524 . - 0 ID=cds-WP_003899889.1;Parent=gene-AL55_RS20890;Dbxref=GenBank:WP_003899889.1;Name=WP_003899889.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;gene=fixB;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217544.1;locus_tag=AL55_RS20890;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_003899889.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3377563 3378363 . - . ID=gene-AL55_RS20895;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=AL55_RS20895;old_locus_tag=AL55_03143 NZ_KK316828.1 Protein Homology CDS 3377563 3378363 . - 0 ID=cds-WP_003415921.1;Parent=gene-AL55_RS20895;Dbxref=GenBank:WP_003415921.1;Name=WP_003415921.1;Ontology_term=GO:0009055;gbkey=CDS;gene=fixA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217545.1;locus_tag=AL55_RS20895;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_003415921.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3378594 3379418 . + . ID=gene-AL55_RS20900;Name=AL55_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20900;old_locus_tag=AL55_03144 NZ_KK316828.1 Protein Homology CDS 3378594 3379418 . + 0 ID=cds-WP_003415922.1;Parent=gene-AL55_RS20900;Dbxref=GenBank:WP_003415922.1;Name=WP_003415922.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217546.1;locus_tag=AL55_RS20900;product=class I SAM-dependent methyltransferase;protein_id=WP_003415922.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3379415 3380995 . + . ID=gene-AL55_RS20905;Name=AL55_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20905;old_locus_tag=AL55_03145 NZ_KK316828.1 Protein Homology CDS 3379415 3380995 . + 0 ID=cds-WP_003899891.1;Parent=gene-AL55_RS20905;Dbxref=GenBank:WP_003899891.1;Name=WP_003899891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217547.1;locus_tag=AL55_RS20905;product=1%2C4-alpha-glucan branching protein domain-containing protein;protein_id=WP_003899891.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3381027 3382271 . + . ID=gene-AL55_RS20910;Name=AL55_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20910;old_locus_tag=AL55_03146 NZ_KK316828.1 Protein Homology CDS 3381027 3382271 . + 0 ID=cds-WP_003415928.1;Parent=gene-AL55_RS20910;Dbxref=GenBank:WP_003415928.1;Name=WP_003415928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217548.1;locus_tag=AL55_RS20910;product=glycogen synthase;protein_id=WP_003415928.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3382305 3382694 . + . ID=gene-AL55_RS20915;Name=AL55_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20915;old_locus_tag=AL55_03147 NZ_KK316828.1 Protein Homology CDS 3382305 3382694 . + 0 ID=cds-WP_003415930.1;Parent=gene-AL55_RS20915;Dbxref=GenBank:WP_003415930.1;Name=WP_003415930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837058.1;locus_tag=AL55_RS20915;product=hypothetical protein;protein_id=WP_003415930.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3382873 3383421 . + . ID=gene-AL55_RS20920;Name=AL55_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20920;old_locus_tag=AL55_03148 NZ_KK316828.1 Protein Homology CDS 3382873 3383421 . + 0 ID=cds-WP_003415932.1;Parent=gene-AL55_RS20920;Dbxref=GenBank:WP_003415932.1;Name=WP_003415932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217549.1;locus_tag=AL55_RS20920;product=anti-apoptotic protein;protein_id=WP_003415932.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3383512 3384249 . - . ID=gene-AL55_RS20925;Name=AL55_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20925;old_locus_tag=AL55_03149 NZ_KK316828.1 Protein Homology CDS 3383512 3384249 . - 0 ID=cds-WP_003415934.1;Parent=gene-AL55_RS20925;Dbxref=GenBank:WP_003415934.1;Name=WP_003415934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288424.1;locus_tag=AL55_RS20925;product=acyltransferase;protein_id=WP_003415934.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3384707 3385954 . + . ID=gene-AL55_RS20930;Name=AL55_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20930;old_locus_tag=AL55_03150 NZ_KK316828.1 Protein Homology CDS 3384707 3385954 . + 0 ID=cds-WP_193586988.1;Parent=gene-AL55_RS20930;Dbxref=GenBank:WP_193586988.1;Name=WP_193586988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725741.1;locus_tag=AL55_RS20930;product=outer membrane protein assembly factor BamB family protein;protein_id=WP_193586988.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3385951 3386634 . - . ID=gene-AL55_RS20935;Name=AL55_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20935;old_locus_tag=AL55_03151 NZ_KK316828.1 Protein Homology CDS 3385951 3386634 . - 0 ID=cds-WP_003415939.1;Parent=gene-AL55_RS20935;Dbxref=GenBank:WP_003415939.1;Name=WP_003415939.1;Ontology_term=GO:0006629,GO:0008126;gbkey=CDS;go_function=acetylesterase activity|0008126||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217552.1;locus_tag=AL55_RS20935;product=esterase;protein_id=WP_003415939.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3386707 3387921 . - . ID=gene-AL55_RS20940;Name=AL55_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20940;old_locus_tag=AL55_03152 NZ_KK316828.1 Protein Homology CDS 3386707 3387921 . - 0 ID=cds-WP_014585367.1;Parent=gene-AL55_RS20940;Dbxref=GenBank:WP_014585367.1;Name=WP_014585367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008259139.1;locus_tag=AL55_RS20940;product=class I SAM-dependent methyltransferase;protein_id=WP_014585367.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3387918 3388901 . - . ID=gene-AL55_RS20945;Name=AL55_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20945;old_locus_tag=AL55_03153 NZ_KK316828.1 Protein Homology CDS 3387918 3388901 . - 0 ID=cds-WP_003415941.1;Parent=gene-AL55_RS20945;Dbxref=GenBank:WP_003415941.1;Name=WP_003415941.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217554.1;locus_tag=AL55_RS20945;product=class I SAM-dependent methyltransferase;protein_id=WP_003415941.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3388912 3389676 . - . ID=gene-AL55_RS20950;Name=AL55_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20950;old_locus_tag=AL55_03154 NZ_KK316828.1 Protein Homology CDS 3388912 3389676 . - 0 ID=cds-WP_003415942.1;Parent=gene-AL55_RS20950;Dbxref=GenBank:WP_003415942.1;Name=WP_003415942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217555.1;locus_tag=AL55_RS20950;product=enoyl-CoA hydratase;protein_id=WP_003415942.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3389685 3390551 . - . ID=gene-AL55_RS20955;Name=AL55_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20955;old_locus_tag=AL55_03155 NZ_KK316828.1 Protein Homology CDS 3389685 3390551 . - 0 ID=cds-WP_003415943.1;Parent=gene-AL55_RS20955;Dbxref=GenBank:WP_003415943.1;Name=WP_003415943.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217556.1;locus_tag=AL55_RS20955;product=NUDIX hydrolase;protein_id=WP_003415943.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3390548 3391411 . - . ID=gene-AL55_RS20960;Name=AL55_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20960;old_locus_tag=AL55_03156 NZ_KK316828.1 Protein Homology CDS 3390548 3391411 . - 0 ID=cds-WP_003415944.1;Parent=gene-AL55_RS20960;Dbxref=GenBank:WP_003415944.1;Name=WP_003415944.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217557.1;locus_tag=AL55_RS20960;product=ABC transporter ATP-binding protein;protein_id=WP_003415944.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3391426 3392655 . - . ID=gene-AL55_RS20965;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=AL55_RS20965;old_locus_tag=AL55_03157 NZ_KK316828.1 Protein Homology CDS 3391426 3392655 . - 0 ID=cds-WP_003415945.1;Parent=gene-AL55_RS20965;Dbxref=GenBank:WP_003415945.1;Name=WP_003415945.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217558.1;locus_tag=AL55_RS20965;product=phosphoserine phosphatase SerB;protein_id=WP_003415945.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3392693 3394414 . - . ID=gene-AL55_RS20970;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=AL55_RS20970;old_locus_tag=AL55_03158 NZ_KK316828.1 Protein Homology CDS 3392693 3394414 . - 0 ID=cds-WP_003415946.1;Parent=gene-AL55_RS20970;Dbxref=GenBank:WP_003415946.1;Name=WP_003415946.1;gbkey=CDS;gene=ctaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217559.1;locus_tag=AL55_RS20970;product=aa3-type cytochrome oxidase subunit I;protein_id=WP_003415946.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3394629 3395708 . + . ID=gene-AL55_RS20975;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;locus_tag=AL55_RS20975;old_locus_tag=AL55_03159 NZ_KK316828.1 Protein Homology CDS 3394629 3395708 . + 0 ID=cds-WP_003415959.1;Parent=gene-AL55_RS20975;Dbxref=GenBank:WP_003415959.1;Name=WP_003415959.1;Ontology_term=GO:0015891,GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;gene=fecB;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217560.1;locus_tag=AL55_RS20975;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_003415959.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3395778 3396818 . + . ID=gene-AL55_RS20980;Name=adhC;gbkey=Gene;gene=adhC;gene_biotype=protein_coding;locus_tag=AL55_RS20980;old_locus_tag=AL55_03160 NZ_KK316828.1 Protein Homology CDS 3395778 3396818 . + 0 ID=cds-WP_003415965.1;Parent=gene-AL55_RS20980;Dbxref=GenBank:WP_003415965.1;Name=WP_003415965.1;Ontology_term=GO:0016491;gbkey=CDS;gene=adhC;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217561.1;locus_tag=AL55_RS20980;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_003415965.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3396807 3397181 . - . ID=gene-AL55_RS20985;Name=AL55_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20985;old_locus_tag=AL55_03161 NZ_KK316828.1 Protein Homology CDS 3396807 3397181 . - 0 ID=cds-WP_003415968.1;Parent=gene-AL55_RS20985;Dbxref=GenBank:WP_003415968.1;Name=WP_003415968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217562.1;locus_tag=AL55_RS20985;product=DUF3349 domain-containing protein;protein_id=WP_003415968.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3397515 3397799 . - . ID=gene-AL55_RS20990;Name=AL55_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS20990;old_locus_tag=AL55_03162 NZ_KK316828.1 Protein Homology CDS 3397515 3397799 . - 0 ID=cds-WP_003902400.1;Parent=gene-AL55_RS20990;Dbxref=GenBank:WP_003902400.1;Name=WP_003902400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217563.1;locus_tag=AL55_RS20990;product=hypothetical protein;protein_id=WP_003902400.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3397897 3398871 . - . ID=gene-AL55_RS20995;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AL55_RS20995;old_locus_tag=AL55_03163 NZ_KK316828.1 Protein Homology CDS 3397897 3398871 . - 0 ID=cds-WP_003415973.1;Parent=gene-AL55_RS20995;Dbxref=GenBank:WP_003415973.1;Name=WP_003415973.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177921.1;locus_tag=AL55_RS20995;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_003415973.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3399002 3400576 . - . ID=gene-AL55_RS21000;Name=AL55_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21000;old_locus_tag=AL55_03164 NZ_KK316828.1 Protein Homology CDS 3399002 3400576 . - 0 ID=cds-WP_003899895.1;Parent=gene-AL55_RS21000;Dbxref=GenBank:WP_003899895.1;Name=WP_003899895.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217565.1;locus_tag=AL55_RS21000;product=flavin-containing monooxygenase;protein_id=WP_003899895.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3400710 3401450 . - . ID=gene-AL55_RS21005;Name=AL55_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21005;old_locus_tag=AL55_03165 NZ_KK316828.1 Protein Homology CDS 3400710 3401450 . - 0 ID=cds-WP_003415979.1;Parent=gene-AL55_RS21005;Dbxref=GenBank:WP_003415979.1;Name=WP_003415979.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217566.1;locus_tag=AL55_RS21005;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003415979.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3401578 3403755 . - . ID=gene-AL55_RS21010;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=AL55_RS21010;old_locus_tag=AL55_03166 NZ_KK316828.1 Protein Homology CDS 3401578 3403755 . - 0 ID=cds-WP_019249836.1;Parent=gene-AL55_RS21010;Dbxref=GenBank:WP_019249836.1;Name=WP_019249836.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719502.1;locus_tag=AL55_RS21010;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_019249836.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3403725 3404177 . - . ID=gene-AL55_RS21015;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=AL55_RS21015;old_locus_tag=AL55_03167 NZ_KK316828.1 Protein Homology CDS 3403725 3404177 . - 0 ID=cds-WP_003415981.1;Parent=gene-AL55_RS21015;Dbxref=GenBank:WP_003415981.1;Name=WP_003415981.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217568.1;locus_tag=AL55_RS21015;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_003415981.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3404212 3404451 . - . ID=gene-AL55_RS21020;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=AL55_RS21020;old_locus_tag=AL55_03168 NZ_KK316828.1 Protein Homology CDS 3404212 3404451 . - 0 ID=cds-WP_003415982.1;Parent=gene-AL55_RS21020;Dbxref=GenBank:WP_003415982.1;Name=WP_003415982.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217569.1;locus_tag=AL55_RS21020;product=redoxin NrdH;protein_id=WP_003415982.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3404914 3405468 . - . ID=gene-AL55_RS21025;Name=AL55_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21025;old_locus_tag=AL55_03169 NZ_KK316828.1 Protein Homology CDS 3404914 3405468 . - 0 ID=cds-WP_003415983.1;Parent=gene-AL55_RS21025;Dbxref=GenBank:WP_003415983.1;Name=WP_003415983.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217570.1;locus_tag=AL55_RS21025;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_003415983.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3405560 3406174 . + . ID=gene-AL55_RS21030;Name=AL55_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21030;old_locus_tag=AL55_03170 NZ_KK316828.1 Protein Homology CDS 3405560 3406174 . + 0 ID=cds-WP_003415984.1;Parent=gene-AL55_RS21030;Dbxref=GenBank:WP_003415984.1;Name=WP_003415984.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217571.1;locus_tag=AL55_RS21030;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003415984.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3406184 3407224 . + . ID=gene-AL55_RS21035;Name=dinP;gbkey=Gene;gene=dinP;gene_biotype=protein_coding;locus_tag=AL55_RS21035;old_locus_tag=AL55_03171 NZ_KK316828.1 Protein Homology CDS 3406184 3407224 . + 0 ID=cds-WP_003899898.1;Parent=gene-AL55_RS21035;Dbxref=GenBank:WP_003899898.1;Name=WP_003899898.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinP;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217572.1;locus_tag=AL55_RS21035;product=DNA polymerase IV;protein_id=WP_003899898.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3407278 3408141 . - . ID=gene-AL55_RS21040;Name=AL55_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21040;old_locus_tag=AL55_03172 NZ_KK316828.1 Protein Homology CDS 3407278 3408141 . - 0 ID=cds-WP_003415986.1;Parent=gene-AL55_RS21040;Dbxref=GenBank:WP_003415986.1;Name=WP_003415986.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217573.1;locus_tag=AL55_RS21040;product=SDR family oxidoreductase;protein_id=WP_003415986.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3408205 3408855 . - . ID=gene-AL55_RS21045;Name=AL55_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21045;old_locus_tag=AL55_03173 NZ_KK316828.1 Protein Homology CDS 3408205 3408855 . - 0 ID=cds-WP_003415987.1;Parent=gene-AL55_RS21045;Dbxref=GenBank:WP_003415987.1;Name=WP_003415987.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217574.1;locus_tag=AL55_RS21045;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003415987.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3408971 3410449 . + . ID=gene-AL55_RS21050;Name=AL55_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21050;old_locus_tag=AL55_03174 NZ_KK316828.1 Protein Homology CDS 3408971 3410449 . + 0 ID=cds-WP_003415988.1;Parent=gene-AL55_RS21050;Dbxref=GenBank:WP_003415988.1;Name=WP_003415988.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217575.1;locus_tag=AL55_RS21050;product=cytochrome P450;protein_id=WP_003415988.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3411220 3412692 . - . ID=gene-AL55_RS21055;Name=AL55_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21055;old_locus_tag=AL55_03175 NZ_KK316828.1 Protein Homology CDS 3411220 3412692 . - 0 ID=cds-WP_003415989.1;Parent=gene-AL55_RS21055;Dbxref=GenBank:WP_003415989.1;Name=WP_003415989.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217576.1;locus_tag=AL55_RS21055;product=FadR/GntR family transcriptional regulator;protein_id=WP_003415989.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3412809 3414974 . - . ID=gene-AL55_RS21060;Name=AL55_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21060;old_locus_tag=AL55_03176 NZ_KK316828.1 Protein Homology CDS 3412809 3414974 . - 0 ID=cds-WP_003902404.1;Parent=gene-AL55_RS21060;Dbxref=GenBank:WP_003902404.1;Name=WP_003902404.1;Ontology_term=GO:0006631,GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217577.1;locus_tag=AL55_RS21060;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003902404.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3415131 3416654 . + . ID=gene-AL55_RS21065;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=AL55_RS21065;old_locus_tag=AL55_03177 NZ_KK316828.1 Protein Homology CDS 3415131 3416654 . + 0 ID=cds-WP_003415991.1;Parent=gene-AL55_RS21065;Dbxref=GenBank:WP_003415991.1;Name=WP_003415991.1;Ontology_term=GO:0006281,GO:0006310,GO:0071897,GO:0003677,GO:0003910,GO:0005524;gbkey=CDS;gene=ligB;go_function=DNA binding|0003677||IEA,DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA biosynthetic process|0071897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217578.1;locus_tag=AL55_RS21065;product=ATP-dependent DNA ligase;protein_id=WP_003415991.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3416790 3419066 . + . ID=gene-AL55_RS21070;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=AL55_RS21070;old_locus_tag=AL55_03178 NZ_KK316828.1 Protein Homology CDS 3416790 3419066 . + 0 ID=cds-WP_003415992.1;Parent=gene-AL55_RS21070;Dbxref=GenBank:WP_003415992.1;Name=WP_003415992.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;gene=cstA;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217579.1;locus_tag=AL55_RS21070;product=carbon starvation CstA family protein;protein_id=WP_003415992.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3419372 3419797 . - . ID=gene-AL55_RS21075;Name=AL55_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21075;old_locus_tag=AL55_03179 NZ_KK316828.1 Protein Homology CDS 3419372 3419797 . - 0 ID=cds-WP_003415994.1;Parent=gene-AL55_RS21075;Dbxref=GenBank:WP_003415994.1;Name=WP_003415994.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217580.1;locus_tag=AL55_RS21075;product=DoxX family protein;protein_id=WP_003415994.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3419934 3420257 . + . ID=gene-AL55_RS21080;Name=mmr;gbkey=Gene;gene=mmr;gene_biotype=protein_coding;locus_tag=AL55_RS21080;old_locus_tag=AL55_03180 NZ_KK316828.1 Protein Homology CDS 3419934 3420257 . + 0 ID=cds-WP_003415995.1;Parent=gene-AL55_RS21080;Dbxref=GenBank:WP_003415995.1;Name=WP_003415995.1;gbkey=CDS;gene=mmr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177922.1;locus_tag=AL55_RS21080;product=multidrug efflux SMR transporter Mmr;protein_id=WP_003415995.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3420254 3420862 . + . ID=gene-AL55_RS21085;Name=AL55_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21085;old_locus_tag=AL55_03181 NZ_KK316828.1 Protein Homology CDS 3420254 3420862 . + 0 ID=cds-WP_003416005.1;Parent=gene-AL55_RS21085;Dbxref=GenBank:WP_003416005.1;Name=WP_003416005.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217582.1;locus_tag=AL55_RS21085;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416005.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3420840 3421385 . + . ID=gene-AL55_RS21090;Name=AL55_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21090;old_locus_tag=AL55_03182 NZ_KK316828.1 Protein Homology CDS 3420840 3421385 . + 0 ID=cds-WP_003917120.1;Parent=gene-AL55_RS21090;Dbxref=GenBank:WP_003917120.1;Name=WP_003917120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385303.1;locus_tag=AL55_RS21090;product=DUF732 domain-containing protein;protein_id=WP_003917120.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3421387 3421459 . - . ID=gene-AL55_RS21095;Name=AL55_RS21095;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS21095;old_locus_tag=AL55_03183 NZ_KK316828.1 tRNAscan-SE tRNA 3421387 3421459 . - . ID=rna-AL55_RS21095;Parent=gene-AL55_RS21095;anticodon=(pos:complement(3421424..3421426));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS21095;product=tRNA-Ala NZ_KK316828.1 tRNAscan-SE exon 3421387 3421459 . - . ID=exon-AL55_RS21095-1;Parent=rna-AL55_RS21095;anticodon=(pos:complement(3421424..3421426));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS21095;product=tRNA-Ala NZ_KK316828.1 RefSeq gene 3421526 3423169 . - . ID=gene-AL55_RS21100;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=AL55_RS21100;old_locus_tag=AL55_03184 NZ_KK316828.1 Protein Homology CDS 3421526 3423169 . - 0 ID=cds-WP_003899902.1;Parent=gene-AL55_RS21100;Dbxref=GenBank:WP_003899902.1;Name=WP_003899902.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217584.1;locus_tag=AL55_RS21100;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_003899902.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3423239 3423637 . + . ID=gene-AL55_RS21105;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AL55_RS21105;old_locus_tag=AL55_03185 NZ_KK316828.1 Protein Homology CDS 3423239 3423637 . + 0 ID=cds-WP_003416045.1;Parent=gene-AL55_RS21105;Dbxref=GenBank:WP_003416045.1;Name=WP_003416045.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217585.1;locus_tag=AL55_RS21105;product=fluoride efflux transporter CrcB;protein_id=WP_003416045.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3423634 3424014 . + . ID=gene-AL55_RS21110;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AL55_RS21110;old_locus_tag=AL55_03186 NZ_KK316828.1 Protein Homology CDS 3423634 3424014 . + 0 ID=cds-WP_003416046.1;Parent=gene-AL55_RS21110;Dbxref=GenBank:WP_003416046.1;Name=WP_003416046.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217586.1;locus_tag=AL55_RS21110;product=fluoride efflux transporter CrcB;protein_id=WP_003416046.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3424011 3425120 . + . ID=gene-AL55_RS21115;Name=AL55_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21115;old_locus_tag=AL55_03187 NZ_KK316828.1 Protein Homology CDS 3424011 3425120 . + 0 ID=cds-WP_003901532.1;Parent=gene-AL55_RS21115;Dbxref=GenBank:WP_003901532.1;Name=WP_003901532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217587.1;locus_tag=AL55_RS21115;product=DUF190 domain-containing protein;protein_id=WP_003901532.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3425265 3425860 . - . ID=gene-AL55_RS28115;Name=AL55_RS28115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28115;old_locus_tag=AL55_03188;pseudo=true NZ_KK316828.1 Protein Homology CDS 3425265 3425860 . - 0 ID=cds-AL55_RS28115;Parent=gene-AL55_RS28115;Note=frameshifted;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: protein motif:HMM:NF012517.6;locus_tag=AL55_RS28115;product=LLM class flavin-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3425876 3426232 . - . ID=gene-AL55_RS21125;Name=AL55_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21125;old_locus_tag=AL55_03189 NZ_KK316828.1 Protein Homology CDS 3425876 3426232 . - 0 ID=cds-WP_003416050.1;Parent=gene-AL55_RS21125;Dbxref=GenBank:WP_003416050.1;Name=WP_003416050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217589.1;locus_tag=AL55_RS21125;product=DUF488 domain-containing protein;protein_id=WP_003416050.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3426326 3427600 . + . ID=gene-AL55_RS21130;Name=AL55_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21130;old_locus_tag=AL55_03190 NZ_KK316828.1 Protein Homology CDS 3426326 3427600 . + 0 ID=cds-WP_003416051.1;Parent=gene-AL55_RS21130;Dbxref=GenBank:WP_003416051.1;Name=WP_003416051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217590.1;locus_tag=AL55_RS21130;product=HNH endonuclease;protein_id=WP_003416051.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3427597 3428520 . - . ID=gene-AL55_RS21135;Name=AL55_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21135;old_locus_tag=AL55_03191 NZ_KK316828.1 Protein Homology CDS 3427597 3428520 . - 0 ID=cds-WP_003416052.1;Parent=gene-AL55_RS21135;Dbxref=GenBank:WP_003416052.1;Name=WP_003416052.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217591.1;locus_tag=AL55_RS21135;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_003416052.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3428619 3429095 . + . ID=gene-AL55_RS21140;Name=AL55_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21140;old_locus_tag=AL55_03192 NZ_KK316828.1 Protein Homology CDS 3428619 3429095 . + 0 ID=cds-WP_003416053.1;Parent=gene-AL55_RS21140;Dbxref=GenBank:WP_003416053.1;Name=WP_003416053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217592.1;locus_tag=AL55_RS21140;product=SRPBCC family protein;protein_id=WP_003416053.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3429088 3430899 . + . ID=gene-AL55_RS21145;Name=AL55_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21145;old_locus_tag=AL55_03193 NZ_KK316828.1 Protein Homology CDS 3429088 3430899 . + 0 ID=cds-WP_003901535.1;Parent=gene-AL55_RS21145;Dbxref=GenBank:WP_003901535.1;Name=WP_003901535.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177923.1;locus_tag=AL55_RS21145;product=sulfatase-like hydrolase/transferase;protein_id=WP_003901535.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3430900 3431301 . + . ID=gene-AL55_RS21150;Name=hab;gbkey=Gene;gene=hab;gene_biotype=protein_coding;locus_tag=AL55_RS21150;old_locus_tag=AL55_03194 NZ_KK316828.1 Protein Homology CDS 3430900 3431301 . + 0 ID=cds-WP_003416059.1;Parent=gene-AL55_RS21150;Dbxref=GenBank:WP_003416059.1;Name=WP_003416059.1;gbkey=CDS;gene=hab;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217594.1;locus_tag=AL55_RS21150;product=styrene oxide isomerase;protein_id=WP_003416059.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3431317 3432144 . - . ID=gene-AL55_RS21155;Name=AL55_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21155;old_locus_tag=AL55_03195 NZ_KK316828.1 Protein Homology CDS 3431317 3432144 . - 0 ID=cds-WP_003416061.1;Parent=gene-AL55_RS21155;Dbxref=GenBank:WP_003416061.1;Name=WP_003416061.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217595.1;locus_tag=AL55_RS21155;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003416061.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3432203 3435535 . - . ID=gene-AL55_RS21160;Name=pknK;gbkey=Gene;gene=pknK;gene_biotype=protein_coding;locus_tag=AL55_RS21160;old_locus_tag=AL55_03196 NZ_KK316828.1 Protein Homology CDS 3432203 3435535 . - 0 ID=cds-WP_003899905.1;Parent=gene-AL55_RS21160;Dbxref=GenBank:WP_003899905.1;Name=WP_003899905.1;gbkey=CDS;gene=pknK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217596.1;locus_tag=AL55_RS21160;product=serine/threonine protein kinase PknK;protein_id=WP_003899905.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3435587 3436825 . + . ID=gene-AL55_RS21165;Name=AL55_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21165;old_locus_tag=AL55_03197 NZ_KK316828.1 Protein Homology CDS 3435587 3436825 . + 0 ID=cds-WP_003902406.1;Parent=gene-AL55_RS21165;Dbxref=GenBank:WP_003902406.1;Name=WP_003902406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217597.1;locus_tag=AL55_RS21165;product=nucleotidyltransferase;protein_id=WP_003902406.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3436951 3437973 . - . ID=gene-AL55_RS21170;Name=virS;gbkey=Gene;gene=virS;gene_biotype=protein_coding;locus_tag=AL55_RS21170;old_locus_tag=AL55_03198 NZ_KK316828.1 Protein Homology CDS 3436951 3437973 . - 0 ID=cds-WP_003416068.1;Parent=gene-AL55_RS21170;Dbxref=GenBank:WP_003416068.1;Name=WP_003416068.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=virS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217598.1;locus_tag=AL55_RS21170;product=AraC family transcriptional regulator;protein_id=WP_003416068.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3438051 3439538 . + . ID=gene-AL55_RS21175;Name=AL55_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21175;old_locus_tag=AL55_03199 NZ_KK316828.1 Protein Homology CDS 3438051 3439538 . + 0 ID=cds-WP_003899906.1;Parent=gene-AL55_RS21175;Dbxref=GenBank:WP_003899906.1;Name=WP_003899906.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217599.1;locus_tag=AL55_RS21175;product=flavin-containing monooxygenase;protein_id=WP_003899906.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3439544 3440470 . + . ID=gene-AL55_RS21180;Name=lipR;gbkey=Gene;gene=lipR;gene_biotype=protein_coding;locus_tag=AL55_RS21180;old_locus_tag=AL55_03200 NZ_KK316828.1 Protein Homology CDS 3439544 3440470 . + 0 ID=cds-WP_003901538.1;Parent=gene-AL55_RS21180;Dbxref=GenBank:WP_003901538.1;Name=WP_003901538.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipR;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217600.1;locus_tag=AL55_RS21180;product=alpha/beta hydrolase;protein_id=WP_003901538.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3440467 3441297 . + . ID=gene-AL55_RS21185;Name=AL55_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21185;old_locus_tag=AL55_03201 NZ_KK316828.1 Protein Homology CDS 3440467 3441297 . + 0 ID=cds-WP_003416074.1;Parent=gene-AL55_RS21185;Dbxref=GenBank:WP_003416074.1;Name=WP_003416074.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217601.1;locus_tag=AL55_RS21185;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003416074.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3441328 3442434 . + . ID=gene-AL55_RS21190;Name=adhD;gbkey=Gene;gene=adhD;gene_biotype=protein_coding;locus_tag=AL55_RS21190;old_locus_tag=AL55_03202 NZ_KK316828.1 Protein Homology CDS 3441328 3442434 . + 0 ID=cds-WP_003416075.1;Parent=gene-AL55_RS21190;Dbxref=GenBank:WP_003416075.1;Name=WP_003416075.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;gene=adhD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217602.1;locus_tag=AL55_RS21190;product=NDMA-dependent alcohol dehydrogenase;protein_id=WP_003416075.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3442472 3443890 . + . ID=gene-AL55_RS21195;Name=AL55_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21195;old_locus_tag=AL55_03203 NZ_KK316828.1 Protein Homology CDS 3442472 3443890 . + 0 ID=cds-WP_003416076.1;Parent=gene-AL55_RS21195;Dbxref=GenBank:WP_003416076.1;Name=WP_003416076.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217603.1;locus_tag=AL55_RS21195;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003416076.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3443887 3445311 . + . ID=gene-AL55_RS21200;Name=AL55_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21200;old_locus_tag=AL55_03204 NZ_KK316828.1 Protein Homology CDS 3443887 3445311 . + 0 ID=cds-WP_003416079.1;Parent=gene-AL55_RS21200;Dbxref=GenBank:WP_003416079.1;Name=WP_003416079.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217604.1;locus_tag=AL55_RS21200;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003416079.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3445308 3446819 . + . ID=gene-AL55_RS21205;Name=fadD13;gbkey=Gene;gene=fadD13;gene_biotype=protein_coding;locus_tag=AL55_RS21205;old_locus_tag=AL55_03205 NZ_KK316828.1 Protein Homology CDS 3445308 3446819 . + 0 ID=cds-WP_003416081.1;Parent=gene-AL55_RS21205;Dbxref=GenBank:WP_003416081.1;Name=WP_003416081.1;gbkey=CDS;gene=fadD13;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217605.1;locus_tag=AL55_RS21205;product=long-chain-fatty-acid--CoA ligase FadD13;protein_id=WP_003416081.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3447758 3448645 . + . ID=gene-AL55_RS21210;Name=AL55_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21210;old_locus_tag=AL55_03206 NZ_KK316828.1 Protein Homology CDS 3447758 3448645 . + 0 ID=cds-WP_003416086.1;Parent=gene-AL55_RS21210;Dbxref=GenBank:WP_003416086.1;Name=WP_003416086.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217606.1;locus_tag=AL55_RS21210;product=Rv3090 family protease;protein_id=WP_003416086.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3448663 3450354 . + . ID=gene-AL55_RS21215;Name=AL55_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21215;old_locus_tag=AL55_03207 NZ_KK316828.1 Protein Homology CDS 3448663 3450354 . + 0 ID=cds-WP_003900628.1;Parent=gene-AL55_RS21215;Dbxref=GenBank:WP_003900628.1;Name=WP_003900628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217607.1;locus_tag=AL55_RS21215;product=patatin-like phospholipase family protein;protein_id=WP_003900628.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3450361 3451281 . - . ID=gene-AL55_RS21220;Name=AL55_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21220;old_locus_tag=AL55_03208 NZ_KK316828.1 Protein Homology CDS 3450361 3451281 . - 0 ID=cds-WP_003416091.1;Parent=gene-AL55_RS21220;Dbxref=GenBank:WP_003416091.1;Name=WP_003416091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217608.1;locus_tag=AL55_RS21220;product=DUF808 domain-containing protein;protein_id=WP_003416091.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3451307 3452311 . - . ID=gene-AL55_RS21225;Name=AL55_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21225;old_locus_tag=AL55_03209 NZ_KK316828.1 Protein Homology CDS 3451307 3452311 . - 0 ID=cds-WP_003416094.1;Parent=gene-AL55_RS21225;Dbxref=GenBank:WP_003416094.1;Name=WP_003416094.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217609.1;locus_tag=AL55_RS21225;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003416094.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3452308 3453438 . - . ID=gene-AL55_RS21230;Name=AL55_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21230;old_locus_tag=AL55_03210 NZ_KK316828.1 Protein Homology CDS 3452308 3453438 . - 0 ID=cds-WP_003416097.1;Parent=gene-AL55_RS21230;Dbxref=GenBank:WP_003416097.1;Name=WP_003416097.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217610.1;locus_tag=AL55_RS21230;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003416097.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3453520 3453996 . + . ID=gene-AL55_RS21235;Name=AL55_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21235;old_locus_tag=AL55_03211 NZ_KK316828.1 Protein Homology CDS 3453520 3453996 . + 0 ID=cds-WP_003416099.1;Parent=gene-AL55_RS21235;Dbxref=GenBank:WP_003416099.1;Name=WP_003416099.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217611.1;locus_tag=AL55_RS21235;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_003416099.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3454094 3455233 . + . ID=gene-AL55_RS21240;Name=AL55_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21240;old_locus_tag=AL55_03212 NZ_KK316828.1 Protein Homology CDS 3454094 3455233 . + 0 ID=cds-WP_003899909.1;Parent=gene-AL55_RS21240;Dbxref=GenBank:WP_003899909.1;Name=WP_003899909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217612.1;locus_tag=AL55_RS21240;product=glycoside hydrolase 5 family protein;protein_id=WP_003899909.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3455325 3456638 . - . ID=gene-AL55_RS21245;Name=lipY;gbkey=Gene;gene=lipY;gene_biotype=protein_coding;locus_tag=AL55_RS21245;old_locus_tag=AL55_03213 NZ_KK316828.1 Protein Homology CDS 3455325 3456638 . - 0 ID=cds-WP_003901542.1;Parent=gene-AL55_RS21245;Dbxref=GenBank:WP_003901542.1;Name=WP_003901542.1;gbkey=CDS;gene=lipY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177924.1;locus_tag=AL55_RS21245;product=triacylglycerol lipase LipY;protein_id=WP_003901542.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3456757 3457209 . - . ID=gene-AL55_RS26460;Name=AL55_RS26460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26460;old_locus_tag=AL55_03214 NZ_KK316828.1 Protein Homology CDS 3456757 3457209 . - 0 ID=cds-WP_003899911.1;Parent=gene-AL55_RS26460;Dbxref=GenBank:WP_003899911.1;Name=WP_003899911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217614.1;locus_tag=AL55_RS26460;product=hypothetical protein;protein_id=WP_003899911.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3457153 3457473 . + . ID=gene-AL55_RS21255;Name=pemK;gbkey=Gene;gene=pemK;gene_biotype=protein_coding;locus_tag=AL55_RS21255;old_locus_tag=AL55_03216 NZ_KK316828.1 Protein Homology CDS 3457153 3457473 . + 0 ID=cds-WP_003416110.1;Parent=gene-AL55_RS21255;Dbxref=GenBank:WP_003416110.1;Name=WP_003416110.1;gbkey=CDS;gene=pemK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411812.1;locus_tag=AL55_RS21255;product=type II toxin-antitoxin system toxin endoribonuclease PemK;protein_id=WP_003416110.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3457514 3457881 . - . ID=gene-AL55_RS26465;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=AL55_RS26465 NZ_KK316828.1 cmsearch tmRNA 3457514 3457881 . - . ID=rna-AL55_RS26465;Parent=gene-AL55_RS26465;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL55_RS26465;product=transfer-messenger RNA NZ_KK316828.1 cmsearch exon 3457514 3457881 . - . ID=exon-AL55_RS26465-1;Parent=rna-AL55_RS26465;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL55_RS26465;product=transfer-messenger RNA NZ_KK316828.1 RefSeq gene 3457960 3458811 . - . ID=gene-AL55_RS21260;Name=AL55_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21260;old_locus_tag=AL55_03217 NZ_KK316828.1 Protein Homology CDS 3457960 3458811 . - 0 ID=cds-WP_003416111.1;Parent=gene-AL55_RS21260;Dbxref=GenBank:WP_003416111.1;Name=WP_003416111.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217615.1;locus_tag=AL55_RS21260;product=maleylpyruvate isomerase family mycothiol-dependent enzyme;protein_id=WP_003416111.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3458848 3459330 . - . ID=gene-AL55_RS21265;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AL55_RS21265;old_locus_tag=AL55_03218 NZ_KK316828.1 Protein Homology CDS 3458848 3459330 . - 0 ID=cds-WP_003416113.1;Parent=gene-AL55_RS21265;Dbxref=GenBank:WP_003416113.1;Name=WP_003416113.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217616.1;locus_tag=AL55_RS21265;product=SsrA-binding protein SmpB;protein_id=WP_003416113.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3459333 3460226 . - . ID=gene-AL55_RS21270;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=AL55_RS21270;old_locus_tag=AL55_03219 NZ_KK316828.1 Protein Homology CDS 3459333 3460226 . - 0 ID=cds-WP_003416117.1;Parent=gene-AL55_RS21270;Dbxref=GenBank:WP_003416117.1;Name=WP_003416117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ftsX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217617.1;locus_tag=AL55_RS21270;product=permease-like cell division protein FtsX;protein_id=WP_003416117.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3460227 3460916 . - . ID=gene-AL55_RS21275;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=AL55_RS21275;old_locus_tag=AL55_03220 NZ_KK316828.1 Protein Homology CDS 3460227 3460916 . - 0 ID=cds-WP_003416120.1;Parent=gene-AL55_RS21275;Dbxref=GenBank:WP_003416120.1;Name=WP_003416120.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217618.1;locus_tag=AL55_RS21275;product=cell division ATP-binding protein FtsE;protein_id=WP_003416120.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3460960 3461397 . - . ID=gene-AL55_RS21280;Name=AL55_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21280;old_locus_tag=AL55_03221 NZ_KK316828.1 Protein Homology CDS 3460960 3461397 . - 0 ID=cds-WP_003416124.1;Parent=gene-AL55_RS21280;Dbxref=GenBank:WP_003416124.1;Name=WP_003416124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217619.1;locus_tag=AL55_RS21280;product=Rv3103c family proline-rich protein;protein_id=WP_003416124.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3461399 3462325 . - . ID=gene-AL55_RS21285;Name=AL55_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21285;old_locus_tag=AL55_03222 NZ_KK316828.1 Protein Homology CDS 3461399 3462325 . - 0 ID=cds-WP_003416127.1;Parent=gene-AL55_RS21285;Dbxref=GenBank:WP_003416127.1;Name=WP_003416127.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217620.1;locus_tag=AL55_RS21285;product=mechanosensitive ion channel family protein;protein_id=WP_003416127.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3462315 3463430 . - . ID=gene-AL55_RS21290;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AL55_RS21290;old_locus_tag=AL55_03223 NZ_KK316828.1 Protein Homology CDS 3462315 3463430 . - 0 ID=cds-WP_003416129.1;Parent=gene-AL55_RS21290;Dbxref=GenBank:WP_003416129.1;Name=WP_003416129.1;Ontology_term=GO:0006415,GO:0016149,GO:0005737;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725809.1;locus_tag=AL55_RS21290;product=peptide chain release factor 2;protein_id=WP_003416129.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3463555 3464925 . + . ID=gene-AL55_RS21295;Name=fprA;gbkey=Gene;gene=fprA;gene_biotype=protein_coding;locus_tag=AL55_RS21295;old_locus_tag=AL55_03224 NZ_KK316828.1 Protein Homology CDS 3463555 3464925 . + 0 ID=cds-WP_003900632.1;Parent=gene-AL55_RS21295;Dbxref=GenBank:WP_003900632.1;Name=WP_003900632.1;gbkey=CDS;gene=fprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217622.1;locus_tag=AL55_RS21295;product=ferredoxin--NADP(+) reductase FprA;protein_id=WP_003900632.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3464926 3466509 . - . ID=gene-AL55_RS21300;Name=agpS;gbkey=Gene;gene=agpS;gene_biotype=protein_coding;locus_tag=AL55_RS21300;old_locus_tag=AL55_03225 NZ_KK316828.1 Protein Homology CDS 3464926 3466509 . - 0 ID=cds-WP_003899914.1;Parent=gene-AL55_RS21300;Dbxref=GenBank:WP_003899914.1;Name=WP_003899914.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=agpS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217623.1;locus_tag=AL55_RS21300;product=FAD-binding oxidoreductase;protein_id=WP_003899914.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3466520 3466723 . - . ID=gene-AL55_RS27385;Name=AL55_RS27385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27385 NZ_KK316828.1 Protein Homology CDS 3466520 3466723 . - 0 ID=cds-WP_003913800.1;Parent=gene-AL55_RS27385;Dbxref=GenBank:WP_003913800.1;Name=WP_003913800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913800.1;locus_tag=AL55_RS27385;product=hypothetical protein;protein_id=WP_003913800.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3467197 3468276 . + . ID=gene-AL55_RS21305;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AL55_RS21305;old_locus_tag=AL55_03227 NZ_KK316828.1 Protein Homology CDS 3467197 3468276 . + 0 ID=cds-WP_031695438.1;Parent=gene-AL55_RS21305;Dbxref=GenBank:WP_031695438.1;Name=WP_031695438.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177925.1;locus_tag=AL55_RS21305;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_031695438.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3468327 3468722 . + . ID=gene-AL55_RS21310;Name=AL55_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21310;old_locus_tag=AL55_03228 NZ_KK316828.1 Protein Homology CDS 3468327 3468722 . + 0 ID=cds-WP_003416149.1;Parent=gene-AL55_RS21310;Dbxref=GenBank:WP_003416149.1;Name=WP_003416149.1;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177926.1;locus_tag=AL55_RS21310;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_003416149.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3468719 3469231 . + . ID=gene-AL55_RS21315;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AL55_RS21315;old_locus_tag=AL55_03229 NZ_KK316828.1 Protein Homology CDS 3468719 3469231 . + 0 ID=cds-WP_003899917.1;Parent=gene-AL55_RS21315;Dbxref=GenBank:WP_003899917.1;Name=WP_003899917.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177927.1;locus_tag=AL55_RS21315;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_003899917.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3469248 3469499 . + . ID=gene-AL55_RS21320;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AL55_RS21320;old_locus_tag=AL55_03230 NZ_KK316828.1 Protein Homology CDS 3469248 3469499 . + 0 ID=cds-WP_003899918.1;Parent=gene-AL55_RS21320;Dbxref=GenBank:WP_003899918.1;Name=WP_003899918.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177928.1;locus_tag=AL55_RS21320;product=molybdopterin converting factor subunit 1;protein_id=WP_003899918.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3469622 3470290 . + . ID=gene-AL55_RS21325;Name=AL55_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21325;old_locus_tag=AL55_03231 NZ_KK316828.1 Protein Homology CDS 3469622 3470290 . + 0 ID=cds-WP_003899919.1;Parent=gene-AL55_RS21325;Dbxref=GenBank:WP_003899919.1;Name=WP_003899919.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217629.1;locus_tag=AL55_RS21325;product=HAD family hydrolase;protein_id=WP_003899919.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3470307 3470837 . + . ID=gene-AL55_RS21330;Name=AL55_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21330;old_locus_tag=AL55_03232 NZ_KK316828.1 Protein Homology CDS 3470307 3470837 . + 0 ID=cds-WP_003901545.1;Parent=gene-AL55_RS21330;Dbxref=GenBank:WP_003901545.1;Name=WP_003901545.1;Ontology_term=GO:0009116,GO:0001882,GO:0008270,GO:0019239;gbkey=CDS;go_function=nucleoside binding|0001882||IEA,zinc ion binding|0008270||IEA,deaminase activity|0019239||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217630.1;locus_tag=AL55_RS21330;product=nucleoside deaminase;protein_id=WP_003901545.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3470999 3472246 . + . ID=gene-AL55_RS21335;Name=AL55_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21335;old_locus_tag=AL55_03233 NZ_KK316828.1 Protein Homology CDS 3470999 3472246 . + 0 ID=cds-WP_003901078.1-5;Parent=gene-AL55_RS21335;Dbxref=GenBank:WP_003901078.1;Name=WP_003901078.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL55_RS21335;product=IS256-like element IS1081 family transposase;protein_id=WP_003901078.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3472324 3473493 . + . ID=gene-AL55_RS21340;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=AL55_RS21340;old_locus_tag=AL55_03234 NZ_KK316828.1 Protein Homology CDS 3472324 3473493 . + 0 ID=cds-WP_003899922.1;Parent=gene-AL55_RS21340;Dbxref=GenBank:WP_003899922.1;Name=WP_003899922.1;Ontology_term=GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177929.1;locus_tag=AL55_RS21340;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_003899922.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3473522 3474355 . + . ID=gene-AL55_RS21345;Name=AL55_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21345;old_locus_tag=AL55_03235 NZ_KK316828.1 Protein Homology CDS 3473522 3474355 . + 0 ID=cds-WP_003404293.1-2;Parent=gene-AL55_RS21345;Dbxref=GenBank:WP_003404293.1;Name=WP_003404293.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215330.1;locus_tag=AL55_RS21345;product=sulfurtransferase;protein_id=WP_003404293.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3474357 3474659 . + . ID=gene-AL55_RS21350;Name=AL55_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21350;old_locus_tag=AL55_03236 NZ_KK316828.1 Protein Homology CDS 3474357 3474659 . + 0 ID=cds-WP_003404278.1;Parent=gene-AL55_RS21350;Dbxref=GenBank:WP_003404278.1;Name=WP_003404278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215329.1;locus_tag=AL55_RS21350;product=DUF1416 domain-containing protein;protein_id=WP_003404278.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3474709 3475356 . + . ID=gene-AL55_RS0105420;Name=AL55_RS0105420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0105420;partial=true;pseudo=true;start_range=.,3474709 NZ_KK316828.1 Protein Homology CDS 3474709 3475356 . + 0 ID=cds-AL55_RS0105420;Parent=gene-AL55_RS0105420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215330.1;locus_tag=AL55_RS0105420;partial=true;product=sulfurtransferase;pseudo=true;start_range=.,3474709;transl_table=11 NZ_KK316828.1 RefSeq gene 3475358 3475660 . + . ID=gene-AL55_RS21355;Name=AL55_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21355;old_locus_tag=AL55_03237 NZ_KK316828.1 Protein Homology CDS 3475358 3475660 . + 0 ID=cds-WP_003404278.1-2;Parent=gene-AL55_RS21355;Dbxref=GenBank:WP_003404278.1;Name=WP_003404278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215329.1;locus_tag=AL55_RS21355;product=DUF1416 domain-containing protein;protein_id=WP_003404278.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3475681 3476124 . + . ID=gene-AL55_RS21360;Name=AL55_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21360;old_locus_tag=AL55_03238 NZ_KK316828.1 Protein Homology CDS 3475681 3476124 . + 0 ID=cds-WP_003899923.1;Parent=gene-AL55_RS21360;Dbxref=GenBank:WP_003899923.1;Name=WP_003899923.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177931.1;locus_tag=AL55_RS21360;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_003899923.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3476121 3476723 . + . ID=gene-AL55_RS21365;Name=AL55_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21365;old_locus_tag=AL55_03239 NZ_KK316828.1 Protein Homology CDS 3476121 3476723 . + 0 ID=cds-WP_003899924.1;Parent=gene-AL55_RS21365;Dbxref=GenBank:WP_003899924.1;Name=WP_003899924.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217636.1;locus_tag=AL55_RS21365;product=class I SAM-dependent methyltransferase;protein_id=WP_003899924.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3477058 3478260 . + . ID=gene-AL55_RS21370;Name=cyp141;gbkey=Gene;gene=cyp141;gene_biotype=protein_coding;locus_tag=AL55_RS21370;old_locus_tag=AL55_03240 NZ_KK316828.1 Protein Homology CDS 3477058 3478260 . + 0 ID=cds-WP_003899925.1;Parent=gene-AL55_RS21370;Dbxref=GenBank:WP_003899925.1;Name=WP_003899925.1;gbkey=CDS;gene=cyp141;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217637.1;locus_tag=AL55_RS21370;product=cytochrome P450 Cyp141;protein_id=WP_003899925.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3478342 3478461 . - . ID=gene-AL55_RS27085;Name=AL55_RS27085;end_range=3478461,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27085;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 3478342 3478461 . - 0 ID=cds-AL55_RS27085;Parent=gene-AL55_RS27085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3478461,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011291581.1;locus_tag=AL55_RS27085;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3478683 3479108 . + . ID=gene-AL55_RS21375;Name=AL55_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21375;old_locus_tag=AL55_03241 NZ_KK316828.1 Protein Homology CDS 3478683 3479108 . + 0 ID=cds-WP_003912101.1;Parent=gene-AL55_RS21375;Dbxref=GenBank:WP_003912101.1;Name=WP_003912101.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042840.4;locus_tag=AL55_RS21375;product=DUF6788 family protein;protein_id=WP_003912101.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3479118 3479612 . + . ID=gene-AL55_RS21380;Name=AL55_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21380;old_locus_tag=AL55_03242 NZ_KK316828.1 Protein Homology CDS 3479118 3479612 . + 0 ID=cds-WP_003901547.1;Parent=gene-AL55_RS21380;Dbxref=GenBank:WP_003901547.1;Name=WP_003901547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217639.1;locus_tag=AL55_RS21380;product=hypothetical protein;protein_id=WP_003901547.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3479913 3480001 . + . ID=gene-AL55_RS28275;Name=AL55_RS28275;end_range=3480001,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28275;partial=true;pseudo=true;start_range=.,3479913 NZ_KK316828.1 Protein Homology CDS 3479913 3480001 . + 0 ID=cds-AL55_RS28275;Parent=gene-AL55_RS28275;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3480001,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177773.1;locus_tag=AL55_RS28275;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3479913;transl_table=11 NZ_KK316828.1 RefSeq gene 3480055 3480924 . + . ID=gene-AL55_RS21385;Name=moaR1;gbkey=Gene;gene=moaR1;gene_biotype=protein_coding;locus_tag=AL55_RS21385;old_locus_tag=AL55_03243 NZ_KK316828.1 Protein Homology CDS 3480055 3480924 . + 0 ID=cds-WP_003900636.1;Parent=gene-AL55_RS21385;Dbxref=GenBank:WP_003900636.1;Name=WP_003900636.1;gbkey=CDS;gene=moaR1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217640.1;locus_tag=AL55_RS21385;product=transcriptional regulator MoaR1;protein_id=WP_003900636.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3481025 3482200 . - . ID=gene-AL55_RS21390;Name=AL55_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21390;old_locus_tag=AL55_03244 NZ_KK316828.1 Protein Homology CDS 3481025 3482200 . - 0 ID=cds-WP_003899929.1;Parent=gene-AL55_RS21390;Dbxref=GenBank:WP_003899929.1;Name=WP_003899929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177932.1;locus_tag=AL55_RS21390;product=PPE family protein;protein_id=WP_003899929.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3482696 3483730 . + . ID=gene-AL55_RS21400;Name=AL55_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21400;old_locus_tag=AL55_03246 NZ_KK316828.1 Protein Homology CDS 3482696 3483730 . + 0 ID=cds-WP_003416354.1;Parent=gene-AL55_RS21400;Dbxref=GenBank:WP_003416354.1;Name=WP_003416354.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217643.1;locus_tag=AL55_RS21400;product=Acg family FMN-binding oxidoreductase;protein_id=WP_003416354.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3483717 3484067 . - . ID=gene-AL55_RS0105425;Name=AL55_RS0105425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105425 NZ_KK316828.1 Protein Homology CDS 3483717 3484067 . - 0 ID=cds-WP_003416355.1;Parent=gene-AL55_RS0105425;Dbxref=GenBank:WP_003416355.1;Name=WP_003416355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416355.1;locus_tag=AL55_RS0105425;product=hypothetical protein;protein_id=WP_003416355.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3484149 3484373 . - . ID=gene-AL55_RS27390;Name=AL55_RS27390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27390 NZ_KK316828.1 GeneMarkS-2+ CDS 3484149 3484373 . - 0 ID=cds-WP_009938000.1;Parent=gene-AL55_RS27390;Dbxref=GenBank:WP_009938000.1;Name=WP_009938000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS27390;product=hypothetical protein;protein_id=WP_009938000.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3484502 3485763 . - . ID=gene-AL55_RS21405;Name=AL55_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21405;old_locus_tag=AL55_03247 NZ_KK316828.1 Protein Homology CDS 3485475 3485763 . - 0 ID=cds-WP_087902221.1-13;Parent=gene-AL55_RS21405;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS21405;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 3484502 3485475 . - 2 ID=cds-WP_087902221.1-13;Parent=gene-AL55_RS21405;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS21405;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3485720 3486088 . - . ID=gene-AL55_RS0105435;Name=AL55_RS0105435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105435 NZ_KK316828.1 GeneMarkS-2+ CDS 3485720 3486088 . - 0 ID=cds-WP_014584891.1;Parent=gene-AL55_RS0105435;Dbxref=GenBank:WP_014584891.1;Name=WP_014584891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS0105435;product=hypothetical protein;protein_id=WP_014584891.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3486567 3486899 . + . ID=gene-AL55_RS21415;Name=AL55_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21415;old_locus_tag=AL55_03250 NZ_KK316828.1 Protein Homology CDS 3486567 3486899 . + 0 ID=cds-WP_003416360.1;Parent=gene-AL55_RS21415;Dbxref=GenBank:WP_003416360.1;Name=WP_003416360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416360.1;locus_tag=AL55_RS21415;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_003416360.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3486882 3488273 . - . ID=gene-AL55_RS21420;Name=tgs1;gbkey=Gene;gene=tgs1;gene_biotype=protein_coding;locus_tag=AL55_RS21420;old_locus_tag=AL55_03251 NZ_KK316828.1 Protein Homology CDS 3486882 3488273 . - 0 ID=cds-WP_003899932.1;Parent=gene-AL55_RS21420;Dbxref=GenBank:WP_003899932.1;Name=WP_003899932.1;gbkey=CDS;gene=tgs1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217646.1;locus_tag=AL55_RS21420;product=diacylglycerol O-acyltransferase;protein_id=WP_003899932.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3488458 3489456 . + . ID=gene-AL55_RS21425;Name=AL55_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21425;old_locus_tag=AL55_03252 NZ_KK316828.1 Protein Homology CDS 3488458 3489456 . + 0 ID=cds-WP_003416362.1;Parent=gene-AL55_RS21425;Dbxref=GenBank:WP_003416362.1;Name=WP_003416362.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217647.3;locus_tag=AL55_RS21425;product=Acg family FMN-binding oxidoreductase;protein_id=WP_003416362.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3489436 3491172 . - . ID=gene-AL55_RS21430;Name=dosS;gbkey=Gene;gene=dosS;gene_biotype=protein_coding;gene_synonym=devS;locus_tag=AL55_RS21430;old_locus_tag=AL55_03253 NZ_KK316828.1 Protein Homology CDS 3489436 3491172 . - 0 ID=cds-WP_003899933.1;Parent=gene-AL55_RS21430;Dbxref=GenBank:WP_003899933.1;Name=WP_003899933.1;gbkey=CDS;gene=dosS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217648.1;locus_tag=AL55_RS21430;product=hypoxia sensor histidine kinase DosS/DevS;protein_id=WP_003899933.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3491169 3491822 . - . ID=gene-AL55_RS21435;Name=dosR;gbkey=Gene;gene=dosR;gene_biotype=protein_coding;gene_synonym=devR;locus_tag=AL55_RS21435;old_locus_tag=AL55_03254 NZ_KK316828.1 Protein Homology CDS 3491169 3491822 . - 0 ID=cds-WP_003416369.1;Parent=gene-AL55_RS21435;Dbxref=GenBank:WP_003416369.1;Name=WP_003416369.1;gbkey=CDS;gene=dosR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217649.1;locus_tag=AL55_RS21435;product=hypoxia response regulator transcription factor DosR/DevR;protein_id=WP_003416369.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3491850 3492656 . - . ID=gene-AL55_RS21440;Name=AL55_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21440;old_locus_tag=AL55_03255 NZ_KK316828.1 Protein Homology CDS 3491850 3492656 . - 0 ID=cds-WP_003416373.1;Parent=gene-AL55_RS21440;Dbxref=GenBank:WP_003416373.1;Name=WP_003416373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217650.1;locus_tag=AL55_RS21440;product=universal stress protein;protein_id=WP_003416373.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3493241 3493888 . + . ID=gene-AL55_RS26495;Name=AL55_RS26495;end_range=3493888,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS26495;old_locus_tag=AL55_03256;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 3493241 3493888 . + 0 ID=cds-AL55_RS26495;Parent=gene-AL55_RS26495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3493888,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416381.1;locus_tag=AL55_RS26495;partial=true;product=PPE family protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3494091 3495233 . + . ID=gene-AL55_RS21450;Name=AL55_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21450;old_locus_tag=AL55_03257 NZ_KK316828.1 Protein Homology CDS 3494091 3495233 . + 0 ID=cds-WP_003416381.1;Parent=gene-AL55_RS21450;Dbxref=GenBank:WP_003416381.1;Name=WP_003416381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177935.1;locus_tag=AL55_RS21450;product=PPE family protein;protein_id=WP_003416381.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3495242 3495574 . - . ID=gene-AL55_RS21455;Name=AL55_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21455;old_locus_tag=AL55_03258 NZ_KK316828.1 Protein Homology CDS 3495242 3495574 . - 0 ID=cds-WP_003416383.1;Parent=gene-AL55_RS21455;Dbxref=GenBank:WP_003416383.1;Name=WP_003416383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411850.1;locus_tag=AL55_RS21455;product=hypothetical protein;protein_id=WP_003416383.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3495690 3496472 . + . ID=gene-AL55_RS21460;Name=hisN;gbkey=Gene;gene=hisN;gene_biotype=protein_coding;locus_tag=AL55_RS21460;old_locus_tag=AL55_03259 NZ_KK316828.1 Protein Homology CDS 3495690 3496472 . + 0 ID=cds-WP_003416388.1;Parent=gene-AL55_RS21460;Dbxref=GenBank:WP_003416388.1;Name=WP_003416388.1;Ontology_term=GO:0000105,GO:0004401;gbkey=CDS;gene=hisN;go_function=histidinol-phosphatase activity|0004401||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217653.1;locus_tag=AL55_RS21460;product=histidinol-phosphatase;protein_id=WP_003416388.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3496492 3497580 . + . ID=gene-AL55_RS21465;Name=amrS;gbkey=Gene;gene=amrS;gene_biotype=protein_coding;locus_tag=AL55_RS21465;old_locus_tag=AL55_03260 NZ_KK316828.1 Protein Homology CDS 3496492 3497580 . + 0 ID=cds-WP_003899934.1;Parent=gene-AL55_RS21465;Dbxref=GenBank:WP_003899934.1;Name=WP_003899934.1;Ontology_term=GO:0051536;gbkey=CDS;gene=amrS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217654.1;locus_tag=AL55_RS21465;product=AmmeMemoRadiSam system radical SAM enzyme;protein_id=WP_003899934.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3497659 3499065 . + . ID=gene-AL55_RS21470;Name=AL55_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21470;old_locus_tag=AL55_03261 NZ_KK316828.1 Protein Homology CDS 3497659 3499065 . + 0 ID=cds-WP_003900638.1;Parent=gene-AL55_RS21470;Dbxref=GenBank:WP_003900638.1;Name=WP_003900638.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217655.1;locus_tag=AL55_RS21470;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003900638.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3499086 3500291 . + . ID=gene-AL55_RS21475;Name=AL55_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21475;old_locus_tag=AL55_03262 NZ_KK316828.1 Protein Homology CDS 3499086 3500291 . + 0 ID=cds-WP_003899936.1;Parent=gene-AL55_RS21475;Dbxref=GenBank:WP_003899936.1;Name=WP_003899936.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217656.1;locus_tag=AL55_RS21475;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003899936.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3500391 3501362 . + . ID=gene-AL55_RS21480;Name=AL55_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21480;old_locus_tag=AL55_03263 NZ_KK316828.1 Protein Homology CDS 3500391 3501362 . + 0 ID=cds-WP_003416403.1;Parent=gene-AL55_RS21480;Dbxref=GenBank:WP_003416403.1;Name=WP_003416403.1;Ontology_term=GO:0016491,GO:0016655,GO:0048038,GO:0070402;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217657.1;locus_tag=AL55_RS21480;product=NADPH:quinone oxidoreductase family protein;protein_id=WP_003416403.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3501414 3501842 . - . ID=gene-AL55_RS21485;Name=AL55_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21485;old_locus_tag=AL55_03264 NZ_KK316828.1 Protein Homology CDS 3501414 3501842 . - 0 ID=cds-WP_003416407.1;Parent=gene-AL55_RS21485;Dbxref=GenBank:WP_003416407.1;Name=WP_003416407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217658.1;locus_tag=AL55_RS21485;product=DUF6188 family protein;protein_id=WP_003416407.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3501950 3502351 . + . ID=gene-AL55_RS21490;Name=AL55_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21490;old_locus_tag=AL55_03265 NZ_KK316828.1 Protein Homology CDS 3501950 3502351 . + 0 ID=cds-WP_003416410.1;Parent=gene-AL55_RS21490;Dbxref=GenBank:WP_003416410.1;Name=WP_003416410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217659.1;locus_tag=AL55_RS21490;product=Rv3143 family two-component system response regulator;protein_id=WP_003416410.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3502384 3503613 . - . ID=gene-AL55_RS21495;Name=AL55_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21495;old_locus_tag=AL55_03266 NZ_KK316828.1 Protein Homology CDS 3502384 3503613 . - 0 ID=cds-WP_003901551.1;Parent=gene-AL55_RS21495;Dbxref=GenBank:WP_003901551.1;Name=WP_003901551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177936.2;locus_tag=AL55_RS21495;product=PPE family protein;protein_id=WP_003901551.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3503978 3504364 . + . ID=gene-AL55_RS21500;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=AL55_RS21500;old_locus_tag=AL55_03267 NZ_KK316828.1 Protein Homology CDS 3503978 3504364 . + 0 ID=cds-WP_003416417.1;Parent=gene-AL55_RS21500;Dbxref=GenBank:WP_003416417.1;Name=WP_003416417.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217661.1;locus_tag=AL55_RS21500;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_003416417.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3504373 3504927 . + . ID=gene-AL55_RS21505;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=AL55_RS21505;old_locus_tag=AL55_03268 NZ_KK316828.1 Protein Homology CDS 3504373 3504927 . + 0 ID=cds-WP_003416420.1;Parent=gene-AL55_RS21505;Dbxref=GenBank:WP_003416420.1;Name=WP_003416420.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;gene=nuoB;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874821.1;locus_tag=AL55_RS21505;product=NuoB/complex I 20 kDa subunit family protein;protein_id=WP_003416420.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3504924 3505634 . + . ID=gene-AL55_RS21510;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=AL55_RS21510;old_locus_tag=AL55_03269 NZ_KK316828.1 Protein Homology CDS 3504924 3505634 . + 0 ID=cds-WP_003416425.1;Parent=gene-AL55_RS21510;Dbxref=GenBank:WP_003416425.1;Name=WP_003416425.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217663.1;locus_tag=AL55_RS21510;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_003416425.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3505634 3506956 . + . ID=gene-AL55_RS21515;Name=nuoD;gbkey=Gene;gene=nuoD;gene_biotype=protein_coding;locus_tag=AL55_RS21515;old_locus_tag=AL55_03270 NZ_KK316828.1 Protein Homology CDS 3505634 3506956 . + 0 ID=cds-WP_003416430.1;Parent=gene-AL55_RS21515;Dbxref=GenBank:WP_003416430.1;Name=WP_003416430.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoD;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217664.1;locus_tag=AL55_RS21515;product=NADH dehydrogenase (quinone) subunit D;protein_id=WP_003416430.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3506953 3507711 . + . ID=gene-AL55_RS21520;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=AL55_RS21520;old_locus_tag=AL55_03271 NZ_KK316828.1 Protein Homology CDS 3506953 3507711 . + 0 ID=cds-WP_003416434.1;Parent=gene-AL55_RS21520;Dbxref=GenBank:WP_003416434.1;Name=WP_003416434.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217665.1;locus_tag=AL55_RS21520;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_003416434.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3507708 3509045 . + . ID=gene-AL55_RS21525;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AL55_RS21525;old_locus_tag=AL55_03272 NZ_KK316828.1 Protein Homology CDS 3507708 3509045 . + 0 ID=cds-WP_003416439.1;Parent=gene-AL55_RS21525;Dbxref=GenBank:WP_003416439.1;Name=WP_003416439.1;Ontology_term=GO:0010181,GO:0050136,GO:0051287,GO:0051539;gbkey=CDS;gene=nuoF;go_function=FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217666.1;locus_tag=AL55_RS21525;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_003416439.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3509042 3511462 . + . ID=gene-AL55_RS21530;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AL55_RS21530;old_locus_tag=AL55_03273 NZ_KK316828.1 Protein Homology CDS 3509042 3511462 . + 0 ID=cds-WP_003899937.1;Parent=gene-AL55_RS21530;Dbxref=GenBank:WP_003899937.1;Name=WP_003899937.1;Ontology_term=GO:0042773,GO:0008137,GO:0043546,GO:0051536,GO:0016020;gbkey=CDS;gene=nuoG;go_component=membrane|0016020||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,molybdopterin cofactor binding|0043546||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217667.1;locus_tag=AL55_RS21530;product=NADH-quinone oxidoreductase subunit G;protein_id=WP_003899937.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3511578 3512810 . + . ID=gene-AL55_RS21535;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AL55_RS21535;old_locus_tag=AL55_03274 NZ_KK316828.1 Protein Homology CDS 3511578 3512810 . + 0 ID=cds-WP_003416445.1;Parent=gene-AL55_RS21535;Dbxref=GenBank:WP_003416445.1;Name=WP_003416445.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217668.1;locus_tag=AL55_RS21535;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_003416445.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3512803 3513438 . + . ID=gene-AL55_RS21540;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AL55_RS21540;old_locus_tag=AL55_03275 NZ_KK316828.1 Protein Homology CDS 3512803 3513438 . + 0 ID=cds-WP_003899938.1;Parent=gene-AL55_RS21540;Dbxref=GenBank:WP_003899938.1;Name=WP_003899938.1;Ontology_term=GO:0016651;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217669.1;locus_tag=AL55_RS21540;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_003899938.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3513435 3514223 . + . ID=gene-AL55_RS21545;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=AL55_RS21545;old_locus_tag=AL55_03276 NZ_KK316828.1 Protein Homology CDS 3513435 3514223 . + 0 ID=cds-WP_003416449.1;Parent=gene-AL55_RS21545;Dbxref=GenBank:WP_003416449.1;Name=WP_003416449.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217670.1;locus_tag=AL55_RS21545;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_003416449.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3514220 3514519 . + . ID=gene-AL55_RS21550;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AL55_RS21550;old_locus_tag=AL55_03277 NZ_KK316828.1 Protein Homology CDS 3514220 3514519 . + 0 ID=cds-WP_003416452.1;Parent=gene-AL55_RS21550;Dbxref=GenBank:WP_003416452.1;Name=WP_003416452.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217671.1;locus_tag=AL55_RS21550;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_003416452.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3514530 3516431 . + . ID=gene-AL55_RS21555;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=AL55_RS21555;old_locus_tag=AL55_03278 NZ_KK316828.1 Protein Homology CDS 3514530 3516431 . + 0 ID=cds-WP_003900642.1;Parent=gene-AL55_RS21555;Dbxref=GenBank:WP_003900642.1;Name=WP_003900642.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217672.1;locus_tag=AL55_RS21555;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_003900642.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3516428 3518089 . + . ID=gene-AL55_RS21560;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=AL55_RS21560;old_locus_tag=AL55_03279 NZ_KK316828.1 Protein Homology CDS 3516428 3518089 . + 0 ID=cds-WP_003416460.1;Parent=gene-AL55_RS21560;Dbxref=GenBank:WP_003416460.1;Name=WP_003416460.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217673.1;locus_tag=AL55_RS21560;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_003416460.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3518086 3519681 . + . ID=gene-AL55_RS21565;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=AL55_RS21565;old_locus_tag=AL55_03280 NZ_KK316828.1 Protein Homology CDS 3518086 3519681 . + 0 ID=cds-WP_003900644.1;Parent=gene-AL55_RS21565;Dbxref=GenBank:WP_003900644.1;Name=WP_003900644.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217674.1;locus_tag=AL55_RS21565;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_003900644.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3519687 3521456 . - . ID=gene-AL55_RS21570;Name=AL55_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21570;old_locus_tag=AL55_03281 NZ_KK316828.1 Protein Homology CDS 3519687 3521456 . - 0 ID=cds-WP_003910812.1;Parent=gene-AL55_RS21570;Dbxref=GenBank:WP_003910812.1;Name=WP_003910812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177937.1;locus_tag=AL55_RS21570;product=PPE family protein;protein_id=WP_003910812.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3521704 3523605 . - . ID=gene-AL55_RS21575;Name=AL55_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21575;old_locus_tag=AL55_03282 NZ_KK316828.1 Protein Homology CDS 3521704 3523605 . - 0 ID=cds-WP_003902420.1;Parent=gene-AL55_RS21575;Dbxref=GenBank:WP_003902420.1;Name=WP_003902420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177937.1;locus_tag=AL55_RS21575;product=PPE family protein;protein_id=WP_003902420.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3523780 3524421 . - . ID=gene-AL55_RS21580;Name=AL55_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21580;old_locus_tag=AL55_03283 NZ_KK316828.1 Protein Homology CDS 3523780 3524421 . - 0 ID=cds-WP_003416573.1;Parent=gene-AL55_RS21580;Dbxref=GenBank:WP_003416573.1;Name=WP_003416573.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217676.1;locus_tag=AL55_RS21580;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416573.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3524432 3525580 . - . ID=gene-AL55_RS21585;Name=AL55_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21585;old_locus_tag=AL55_03284 NZ_KK316828.1 Protein Homology CDS 3524432 3525580 . - 0 ID=cds-WP_003416576.1;Parent=gene-AL55_RS21585;Dbxref=GenBank:WP_003416576.1;Name=WP_003416576.1;Ontology_term=GO:0005506,GO:0016705,GO:0051537;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217677.1;locus_tag=AL55_RS21585;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_003416576.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3525650 3526087 . - . ID=gene-AL55_RS21590;Name=AL55_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21590;old_locus_tag=AL55_03285 NZ_KK316828.1 Protein Homology CDS 3525650 3526087 . - 0 ID=cds-WP_003900648.1;Parent=gene-AL55_RS21590;Dbxref=GenBank:WP_003900648.1;Name=WP_003900648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217678.1;locus_tag=AL55_RS21590;product=integral membrane protein;protein_id=WP_003900648.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3526084 3527355 . - . ID=gene-AL55_RS21595;Name=AL55_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21595;old_locus_tag=AL55_03286 NZ_KK316828.1 Protein Homology CDS 3526084 3527355 . - 0 ID=cds-WP_003416584.1;Parent=gene-AL55_RS21595;Dbxref=GenBank:WP_003416584.1;Name=WP_003416584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217679.1;locus_tag=AL55_RS21595;product=DUF58 domain-containing protein;protein_id=WP_003416584.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3527385 3528347 . - . ID=gene-AL55_RS21600;Name=AL55_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21600;old_locus_tag=AL55_03287 NZ_KK316828.1 Protein Homology CDS 3527385 3528347 . - 0 ID=cds-WP_003416588.1;Parent=gene-AL55_RS21600;Dbxref=GenBank:WP_003416588.1;Name=WP_003416588.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217680.1;locus_tag=AL55_RS21600;product=AAA family ATPase;protein_id=WP_003416588.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3528355 3528837 . - . ID=gene-AL55_RS21605;Name=AL55_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21605;old_locus_tag=AL55_03288 NZ_KK316828.1 Protein Homology CDS 3528355 3528837 . - 0 ID=cds-WP_003416593.1;Parent=gene-AL55_RS21605;Dbxref=GenBank:WP_003416593.1;Name=WP_003416593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217681.1;locus_tag=AL55_RS21605;product=hypothetical protein;protein_id=WP_003416593.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3528834 3529793 . - . ID=gene-AL55_RS21610;Name=AL55_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21610;old_locus_tag=AL55_03289 NZ_KK316828.1 Protein Homology CDS 3528834 3529793 . - 0 ID=cds-WP_003900649.1;Parent=gene-AL55_RS21610;Dbxref=GenBank:WP_003900649.1;Name=WP_003900649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217682.1;locus_tag=AL55_RS21610;product=DUF4129 domain-containing protein;protein_id=WP_003900649.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3529873 3530499 . - . ID=gene-AL55_RS21615;Name=AL55_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21615;old_locus_tag=AL55_03290 NZ_KK316828.1 Protein Homology CDS 3529873 3530499 . - 0 ID=cds-WP_003416599.1;Parent=gene-AL55_RS21615;Dbxref=GenBank:WP_003416599.1;Name=WP_003416599.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217683.1;locus_tag=AL55_RS21615;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416599.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3530544 3531680 . + . ID=gene-AL55_RS21620;Name=AL55_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21620;old_locus_tag=AL55_03291 NZ_KK316828.1 Protein Homology CDS 3530544 3531680 . + 0 ID=cds-WP_003900650.1;Parent=gene-AL55_RS21620;Dbxref=GenBank:WP_003900650.1;Name=WP_003900650.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217684.1;locus_tag=AL55_RS21620;product=phosphotransferase family protein;protein_id=WP_003900650.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3531680 3532804 . + . ID=gene-AL55_RS21625;Name=AL55_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21625;old_locus_tag=AL55_03292 NZ_KK316828.1 Protein Homology CDS 3531680 3532804 . + 0 ID=cds-WP_003416605.1;Parent=gene-AL55_RS21625;Dbxref=GenBank:WP_003416605.1;Name=WP_003416605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217685.1;locus_tag=AL55_RS21625;product=Rv3169 family protein;protein_id=WP_003416605.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3532947 3534293 . + . ID=gene-AL55_RS21630;Name=aofH;gbkey=Gene;gene=aofH;gene_biotype=protein_coding;locus_tag=AL55_RS21630;old_locus_tag=AL55_03293 NZ_KK316828.1 Protein Homology CDS 3532947 3534293 . + 0 ID=cds-WP_003416607.1;Parent=gene-AL55_RS21630;Dbxref=GenBank:WP_003416607.1;Name=WP_003416607.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;gene=aofH;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217686.1;locus_tag=AL55_RS21630;product=flavin monoamine oxidase family protein;protein_id=WP_003416607.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3534288 3535259 . - . ID=gene-AL55_RS21635;Name=hpx;gbkey=Gene;gene=hpx;gene_biotype=protein_coding;locus_tag=AL55_RS21635;old_locus_tag=AL55_03294 NZ_KK316828.1 Protein Homology CDS 3534288 3535259 . - 0 ID=cds-WP_010924623.1;Parent=gene-AL55_RS21635;Dbxref=GenBank:WP_010924623.1;Name=WP_010924623.1;gbkey=CDS;gene=hpx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012393253.1;locus_tag=AL55_RS21635;product=alpha/beta fold hydrolase;protein_id=WP_010924623.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3535430 3535609 . - . ID=gene-AL55_RS27395;Name=AL55_RS27395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27395 NZ_KK316828.1 Protein Homology CDS 3535430 3535609 . - 0 ID=cds-WP_003917749.1;Parent=gene-AL55_RS27395;Dbxref=GenBank:WP_003917749.1;Name=WP_003917749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917749.1;locus_tag=AL55_RS27395;product=hypothetical protein;protein_id=WP_003917749.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3535885 3536487 . - . ID=gene-AL55_RS21640;Name=AL55_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21640;old_locus_tag=AL55_03296 NZ_KK316828.1 Protein Homology CDS 3535885 3536487 . - 0 ID=cds-WP_003416617.1;Parent=gene-AL55_RS21640;Dbxref=GenBank:WP_003416617.1;Name=WP_003416617.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217689.1;locus_tag=AL55_RS21640;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416617.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3536580 3537287 . + . ID=gene-AL55_RS21645;Name=AL55_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21645;old_locus_tag=AL55_03297 NZ_KK316828.1 Protein Homology CDS 3536580 3537287 . + 0 ID=cds-WP_003906024.1;Parent=gene-AL55_RS21645;Dbxref=GenBank:WP_003906024.1;Name=WP_003906024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217690.1;locus_tag=AL55_RS21645;product=SDR family oxidoreductase;protein_id=WP_003906024.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3537302 3538789 . + . ID=gene-AL55_RS21650;Name=AL55_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21650;old_locus_tag=AL55_03298 NZ_KK316828.1 Protein Homology CDS 3537302 3538789 . + 0 ID=cds-WP_003416624.1;Parent=gene-AL55_RS21650;Dbxref=GenBank:WP_003416624.1;Name=WP_003416624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217691.1;locus_tag=AL55_RS21650;product=amidase;protein_id=WP_003416624.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3538786 3539742 . - . ID=gene-AL55_RS21655;Name=mesT;gbkey=Gene;gene=mesT;gene_biotype=protein_coding;locus_tag=AL55_RS21655;old_locus_tag=AL55_03299 NZ_KK316828.1 Protein Homology CDS 3538786 3539742 . - 0 ID=cds-WP_003416627.1;Parent=gene-AL55_RS21655;Dbxref=GenBank:WP_003416627.1;Name=WP_003416627.1;gbkey=CDS;gene=mesT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177938.1;locus_tag=AL55_RS21655;product=epoxide hydrolase MesT;protein_id=WP_003416627.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3539889 3540749 . + . ID=gene-AL55_RS21660;Name=AL55_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21660;old_locus_tag=AL55_03300 NZ_KK316828.1 Protein Homology CDS 3539889 3540749 . + 0 ID=cds-WP_003416628.1;Parent=gene-AL55_RS21660;Dbxref=GenBank:WP_003416628.1;Name=WP_003416628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217693.1;locus_tag=AL55_RS21660;product=alpha/beta fold hydrolase;protein_id=WP_003416628.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3540724 3541239 . + . ID=gene-AL55_RS21665;Name=AL55_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21665;old_locus_tag=AL55_03301 NZ_KK316828.1 Protein Homology CDS 3540724 3541239 . + 0 ID=cds-WP_003899950.1;Parent=gene-AL55_RS21665;Dbxref=GenBank:WP_003899950.1;Name=WP_003899950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899950.1;locus_tag=AL55_RS21665;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003899950.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3541243 3541466 . + . ID=gene-AL55_RS27810;Name=AL55_RS27810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27810;partial=true;pseudo=true;start_range=.,3541243 NZ_KK316828.1 Protein Homology CDS 3541243 3541466 . + 0 ID=cds-AL55_RS27810;Parent=gene-AL55_RS27810;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011562696.1;locus_tag=AL55_RS27810;partial=true;product=(R)-hydratase;pseudo=true;start_range=.,3541243;transl_table=11 NZ_KK316828.1 RefSeq gene 3541479 3541772 . + . ID=gene-AL55_RS0105460;Name=AL55_RS0105460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105460 NZ_KK316828.1 Protein Homology CDS 3541479 3541772 . + 0 ID=cds-WP_003416635.1;Parent=gene-AL55_RS0105460;Dbxref=GenBank:WP_003416635.1;Name=WP_003416635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030043.1;locus_tag=AL55_RS0105460;product=hypothetical protein;protein_id=WP_003416635.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3541838 3543099 . + . ID=gene-AL55_RS21675;Name=AL55_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21675;old_locus_tag=AL55_03303 NZ_KK316828.1 Protein Homology CDS 3541838 3542126 . + 0 ID=cds-WP_087902221.1-14;Parent=gene-AL55_RS21675;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS21675;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 3542126 3543099 . + 2 ID=cds-WP_087902221.1-14;Parent=gene-AL55_RS21675;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS21675;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3543418 3544707 . + . ID=gene-AL55_RS21680;Name=AL55_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21680;old_locus_tag=AL55_03304 NZ_KK316828.1 Protein Homology CDS 3543418 3544707 . + 0 ID=cds-WP_003416640.1;Parent=gene-AL55_RS21680;Dbxref=GenBank:WP_003416640.1;Name=WP_003416640.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217695.1;locus_tag=AL55_RS21680;product=ATP-binding protein;protein_id=WP_003416640.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3545042 3546303 . - . ID=gene-AL55_RS21685;Name=AL55_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21685;old_locus_tag=AL55_03305 NZ_KK316828.1 Protein Homology CDS 3546015 3546303 . - 0 ID=cds-WP_087902221.1-15;Parent=gene-AL55_RS21685;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS21685;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 Protein Homology CDS 3545042 3546015 . - 2 ID=cds-WP_087902221.1-15;Parent=gene-AL55_RS21685;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS21685;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3546412 3546846 . - . ID=gene-AL55_RS21695;Name=AL55_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21695;old_locus_tag=AL55_03307 NZ_KK316828.1 Protein Homology CDS 3546412 3546846 . - 0 ID=cds-WP_003899952.1;Parent=gene-AL55_RS21695;Dbxref=GenBank:WP_003899952.1;Name=WP_003899952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217696.1;locus_tag=AL55_RS21695;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003899952.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3546849 3547301 . - . ID=gene-AL55_RS21700;Name=AL55_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21700;old_locus_tag=AL55_03308 NZ_KK316828.1 Protein Homology CDS 3546849 3547301 . - 0 ID=cds-WP_003899953.1;Parent=gene-AL55_RS21700;Dbxref=GenBank:WP_003899953.1;Name=WP_003899953.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217697.1;locus_tag=AL55_RS21700;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003899953.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3547532 3547876 . + . ID=gene-AL55_RS21705;Name=AL55_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21705;old_locus_tag=AL55_03309 NZ_KK316828.1 Protein Homology CDS 3547532 3547876 . + 0 ID=cds-WP_003899954.1;Parent=gene-AL55_RS21705;Dbxref=GenBank:WP_003899954.1;Name=WP_003899954.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217698.1;locus_tag=AL55_RS21705;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003899954.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3547873 3548202 . + . ID=gene-AL55_RS21710;Name=AL55_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21710;old_locus_tag=AL55_03310 NZ_KK316828.1 Protein Homology CDS 3547873 3548202 . + 0 ID=cds-WP_003899955.1;Parent=gene-AL55_RS21710;Dbxref=GenBank:WP_003899955.1;Name=WP_003899955.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217699.1;locus_tag=AL55_RS21710;product=helix-turn-helix domain-containing protein;protein_id=WP_003899955.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3548740 3549087 . + . ID=gene-AL55_RS21715;Name=AL55_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21715;old_locus_tag=AL55_03311 NZ_KK316828.1 Protein Homology CDS 3548740 3549087 . + 0 ID=cds-WP_003899956.1;Parent=gene-AL55_RS21715;Dbxref=GenBank:WP_003899956.1;Name=WP_003899956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217704.1;locus_tag=AL55_RS21715;product=antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein;protein_id=WP_003899956.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3549084 3549704 . + . ID=gene-AL55_RS21720;Name=AL55_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21720;old_locus_tag=AL55_03312 NZ_KK316828.1 Protein Homology CDS 3549084 3549704 . + 0 ID=cds-WP_003899957.1;Parent=gene-AL55_RS21720;Dbxref=GenBank:WP_003899957.1;Name=WP_003899957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217705.1;locus_tag=AL55_RS21720;product=RES family NAD+ phosphorylase;protein_id=WP_003899957.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3549864 3551129 . - . ID=gene-AL55_RS21725;Name=AL55_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21725;old_locus_tag=AL55_03313 NZ_KK316828.1 Protein Homology CDS 3549864 3551129 . - 0 ID=cds-WP_003902423.1;Parent=gene-AL55_RS21725;Dbxref=GenBank:WP_003902423.1;Name=WP_003902423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217706.1;locus_tag=AL55_RS21725;product=hypothetical protein;protein_id=WP_003902423.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3551297 3551506 . + . ID=gene-AL55_RS21730;Name=AL55_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21730;old_locus_tag=AL55_03314 NZ_KK316828.1 Protein Homology CDS 3551297 3551506 . + 0 ID=cds-WP_003416778.1;Parent=gene-AL55_RS21730;Dbxref=GenBank:WP_003416778.1;Name=WP_003416778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411905.1;locus_tag=AL55_RS21730;product=hypothetical protein;protein_id=WP_003416778.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3551541 3551726 . + . ID=gene-AL55_RS28120;Name=AL55_RS28120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28120 NZ_KK316828.1 Protein Homology CDS 3551541 3551726 . + 0 ID=cds-WP_003908177.1;Parent=gene-AL55_RS28120;Dbxref=GenBank:WP_003908177.1;Name=WP_003908177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908177.1;locus_tag=AL55_RS28120;product=hypothetical protein;protein_id=WP_003908177.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3551753 3553009 . - . ID=gene-AL55_RS21735;Name=AL55_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21735;old_locus_tag=AL55_03315 NZ_KK316828.1 Protein Homology CDS 3551753 3553009 . - 0 ID=cds-WP_003899959.1;Parent=gene-AL55_RS21735;Dbxref=GenBank:WP_003899959.1;Name=WP_003899959.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899959.1;locus_tag=AL55_RS21735;product=IS30 family transposase;protein_id=WP_003899959.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3553071 3553295 . - . ID=gene-AL55_RS0105470;Name=AL55_RS0105470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105470 NZ_KK316828.1 Protein Homology CDS 3553071 3553295 . - 0 ID=cds-WP_003416790.1;Parent=gene-AL55_RS0105470;Dbxref=GenBank:WP_003416790.1;Name=WP_003416790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909838.1;locus_tag=AL55_RS0105470;product=hypothetical protein;protein_id=WP_003416790.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3553809 3553885 . - . ID=gene-AL55_RS21740;Name=AL55_RS21740;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS21740;old_locus_tag=AL55_03316 NZ_KK316828.1 tRNAscan-SE tRNA 3553809 3553885 . - . ID=rna-AL55_RS21740;Parent=gene-AL55_RS21740;anticodon=(pos:complement(3553849..3553851));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS21740;product=tRNA-Met NZ_KK316828.1 tRNAscan-SE exon 3553809 3553885 . - . ID=exon-AL55_RS21740-1;Parent=rna-AL55_RS21740;anticodon=(pos:complement(3553849..3553851));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS21740;product=tRNA-Met NZ_KK316828.1 RefSeq gene 3554002 3554466 . + . ID=gene-AL55_RS21745;Name=AL55_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21745;old_locus_tag=AL55_03317 NZ_KK316828.1 Protein Homology CDS 3554002 3554466 . + 0 ID=cds-WP_003913440.1;Parent=gene-AL55_RS21745;Dbxref=GenBank:WP_003913440.1;Name=WP_003913440.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: protein motif:HMM:NF012517.6;locus_tag=AL55_RS21745;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_003913440.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3554636 3557614 . - . ID=gene-AL55_RS21750;Name=AL55_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21750;old_locus_tag=AL55_03318 NZ_KK316828.1 Protein Homology CDS 3554636 3557614 . - 0 ID=cds-WP_003899961.1;Parent=gene-AL55_RS21750;Dbxref=GenBank:WP_003899961.1;Name=WP_003899961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217709.1;locus_tag=AL55_RS21750;product=UPF0182 family protein;protein_id=WP_003899961.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3557706 3558728 . - . ID=gene-AL55_RS21755;Name=AL55_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21755;old_locus_tag=AL55_03319 NZ_KK316828.1 Protein Homology CDS 3557706 3558728 . - 0 ID=cds-WP_003416799.1;Parent=gene-AL55_RS21755;Dbxref=GenBank:WP_003416799.1;Name=WP_003416799.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0005524;gbkey=CDS;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217710.1;locus_tag=AL55_RS21755;product=YlbL family protein;protein_id=WP_003416799.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3558806 3560224 . + . ID=gene-AL55_RS21760;Name=AL55_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21760;old_locus_tag=AL55_03320 NZ_KK316828.1 Protein Homology CDS 3558806 3560224 . + 0 ID=cds-WP_003416804.1;Parent=gene-AL55_RS21760;Dbxref=GenBank:WP_003416804.1;Name=WP_003416804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217711.1;locus_tag=AL55_RS21760;product=zinc-dependent metalloprotease;protein_id=WP_003416804.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3560263 3561129 . + . ID=gene-AL55_RS21765;Name=AL55_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21765;old_locus_tag=AL55_03321 NZ_KK316828.1 Protein Homology CDS 3560263 3561129 . + 0 ID=cds-WP_021082912.1;Parent=gene-AL55_RS21765;Dbxref=GenBank:WP_021082912.1;Name=WP_021082912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014383154.1;locus_tag=AL55_RS21765;product=hypothetical protein;protein_id=WP_021082912.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3561138 3561311 . - . ID=gene-AL55_RS21770;Name=AL55_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21770;old_locus_tag=AL55_03322 NZ_KK316828.1 Protein Homology CDS 3561138 3561311 . - 0 ID=cds-WP_015456486.1;Parent=gene-AL55_RS21770;Dbxref=GenBank:WP_015456486.1;Name=WP_015456486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012393233.1;locus_tag=AL55_RS21770;product=hypothetical protein;protein_id=WP_015456486.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3561466 3562809 . + . ID=gene-AL55_RS21775;Name=AL55_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21775;old_locus_tag=AL55_03323 NZ_KK316828.1 Protein Homology CDS 3561466 3562809 . + 0 ID=cds-WP_003416815.1;Parent=gene-AL55_RS21775;Dbxref=GenBank:WP_003416815.1;Name=WP_003416815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217713.1;locus_tag=AL55_RS21775;product=macrolide-binding ATPase MABP-1;protein_id=WP_003416815.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3562843 3563121 . - . ID=gene-AL55_RS21780;Name=whiB7;gbkey=Gene;gene=whiB7;gene_biotype=protein_coding;locus_tag=AL55_RS21780;old_locus_tag=AL55_03324 NZ_KK316828.1 Protein Homology CDS 3562843 3563121 . - 0 ID=cds-WP_003899963.1;Parent=gene-AL55_RS21780;Dbxref=GenBank:WP_003899963.1;Name=WP_003899963.1;gbkey=CDS;gene=whiB7;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177940.1;locus_tag=AL55_RS21780;product=transcriptional regulator WhiB7;protein_id=WP_003899963.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3563551 3565653 . - . ID=gene-AL55_RS21785;Name=uvrD2;gbkey=Gene;gene=uvrD2;gene_biotype=protein_coding;locus_tag=AL55_RS21785;old_locus_tag=AL55_03325 NZ_KK316828.1 Protein Homology CDS 3563551 3565653 . - 0 ID=cds-WP_003416822.1;Parent=gene-AL55_RS21785;Dbxref=GenBank:WP_003416822.1;Name=WP_003416822.1;gbkey=CDS;gene=uvrD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217714.1;locus_tag=AL55_RS21785;product=ATP-dependent DNA helicase UvrD2;protein_id=WP_003416822.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3565777 3566031 . + . ID=gene-AL55_RS21790;Name=mrx1;gbkey=Gene;gene=mrx1;gene_biotype=protein_coding;locus_tag=AL55_RS21790;old_locus_tag=AL55_03326 NZ_KK316828.1 Protein Homology CDS 3565777 3566031 . + 0 ID=cds-WP_003416827.1;Parent=gene-AL55_RS21790;Dbxref=GenBank:WP_003416827.1;Name=WP_003416827.1;gbkey=CDS;gene=mrx1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177941.1;locus_tag=AL55_RS21790;product=mycoredoxin Mrx1;protein_id=WP_003416827.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3566044 3566985 . - . ID=gene-AL55_RS21795;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=AL55_RS21795;old_locus_tag=AL55_03327 NZ_KK316828.1 Protein Homology CDS 3566044 3566985 . - 0 ID=cds-WP_003906027.1;Parent=gene-AL55_RS21795;Dbxref=GenBank:WP_003906027.1;Name=WP_003906027.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217715.1;locus_tag=AL55_RS21795;product=NAD(+) diphosphatase;protein_id=WP_003906027.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3567044 3568111 . - . ID=gene-AL55_RS21800;Name=AL55_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21800;old_locus_tag=AL55_03328 NZ_KK316828.1 Protein Homology CDS 3567044 3568111 . - 0 ID=cds-WP_003899966.1;Parent=gene-AL55_RS21800;Dbxref=GenBank:WP_003899966.1;Name=WP_003899966.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217716.1;locus_tag=AL55_RS21800;product=potassium channel family protein;protein_id=WP_003899966.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3568173 3571478 . - . ID=gene-AL55_RS21805;Name=adnB;gbkey=Gene;gene=adnB;gene_biotype=protein_coding;locus_tag=AL55_RS21805;old_locus_tag=AL55_03329 NZ_KK316828.1 Protein Homology CDS 3568173 3571478 . - 0 ID=cds-WP_003910809.1;Parent=gene-AL55_RS21805;Dbxref=GenBank:WP_003910809.1;Name=WP_003910809.1;gbkey=CDS;gene=adnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217717.1;locus_tag=AL55_RS21805;product=ATP-dependent DNA helicase AdnB;protein_id=WP_003910809.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3571475 3574642 . - . ID=gene-AL55_RS21810;Name=adnA;gbkey=Gene;gene=adnA;gene_biotype=protein_coding;locus_tag=AL55_RS21810;old_locus_tag=AL55_03330 NZ_KK316828.1 Protein Homology CDS 3571475 3574642 . - 0 ID=cds-WP_003901568.1;Parent=gene-AL55_RS21810;Dbxref=GenBank:WP_003901568.1;Name=WP_003901568.1;gbkey=CDS;gene=adnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217718.1;locus_tag=AL55_RS21810;product=ATP-dependent DNA helicase AdnA;protein_id=WP_003901568.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3574728 3574937 . + . ID=gene-AL55_RS21815;Name=AL55_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21815;old_locus_tag=AL55_03331 NZ_KK316828.1 Protein Homology CDS 3574728 3574937 . + 0 ID=cds-WP_003907005.1;Parent=gene-AL55_RS21815;Dbxref=GenBank:WP_003907005.1;Name=WP_003907005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030044.1;locus_tag=AL55_RS21815;product=hypothetical protein;protein_id=WP_003907005.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3574968 3575753 . + . ID=gene-AL55_RS21820;Name=lipV;gbkey=Gene;gene=lipV;gene_biotype=protein_coding;locus_tag=AL55_RS21820;old_locus_tag=AL55_03332 NZ_KK316828.1 Protein Homology CDS 3574968 3575753 . + 0 ID=cds-WP_003899968.1;Parent=gene-AL55_RS21820;Dbxref=GenBank:WP_003899968.1;Name=WP_003899968.1;gbkey=CDS;gene=lipV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899968.1;locus_tag=AL55_RS21820;product=lipase LipV;protein_id=WP_003899968.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3575756 3576061 . + . ID=gene-AL55_RS21825;Name=AL55_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21825;old_locus_tag=AL55_03333 NZ_KK316828.1 Protein Homology CDS 3575756 3576061 . + 0 ID=cds-WP_003416847.1;Parent=gene-AL55_RS21825;Dbxref=GenBank:WP_003416847.1;Name=WP_003416847.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217720.1;locus_tag=AL55_RS21825;product=MGMT family protein;protein_id=WP_003416847.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3576068 3576922 . - . ID=gene-AL55_RS21830;Name=AL55_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21830;old_locus_tag=AL55_03334 NZ_KK316828.1 Protein Homology CDS 3576068 3576922 . - 0 ID=cds-WP_003416850.1;Parent=gene-AL55_RS21830;Dbxref=GenBank:WP_003416850.1;Name=WP_003416850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014712234.1;locus_tag=AL55_RS21830;product=TIGR02569 family protein;protein_id=WP_003416850.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3576973 3578151 . - . ID=gene-AL55_RS21835;Name=moeZ;gbkey=Gene;gene=moeZ;gene_biotype=protein_coding;locus_tag=AL55_RS21835;old_locus_tag=AL55_03335 NZ_KK316828.1 Protein Homology CDS 3576973 3578151 . - 0 ID=cds-WP_003416855.1;Parent=gene-AL55_RS21835;Dbxref=GenBank:WP_003416855.1;Name=WP_003416855.1;Ontology_term=GO:0008641;gbkey=CDS;gene=moeZ;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177942.1;locus_tag=AL55_RS21835;product=adenylyltransferase/sulfurtransferase MoeZ;protein_id=WP_003416855.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3578242 3579270 . - . ID=gene-AL55_RS21840;Name=AL55_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21840;old_locus_tag=AL55_03336 NZ_KK316828.1 Protein Homology CDS 3578242 3579270 . - 0 ID=cds-WP_003899970.1;Parent=gene-AL55_RS21840;Dbxref=GenBank:WP_003899970.1;Name=WP_003899970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899970.1;locus_tag=AL55_RS21840;product=DUF3152 domain-containing protein;protein_id=WP_003899970.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3579445 3580131 . + . ID=gene-AL55_RS21845;Name=AL55_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21845;old_locus_tag=AL55_03337 NZ_KK316828.1 Protein Homology CDS 3579445 3580131 . + 0 ID=cds-WP_003416861.1;Parent=gene-AL55_RS21845;Dbxref=GenBank:WP_003416861.1;Name=WP_003416861.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217724.1;locus_tag=AL55_RS21845;product=HTH-type transcriptional activator FasR;protein_id=WP_003416861.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3580118 3580390 . - . ID=gene-AL55_RS21850;Name=AL55_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21850;old_locus_tag=AL55_03338 NZ_KK316828.1 Protein Homology CDS 3580118 3580390 . - 0 ID=cds-WP_003416863.1;Parent=gene-AL55_RS21850;Dbxref=GenBank:WP_003416863.1;Name=WP_003416863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177943.1;locus_tag=AL55_RS21850;product=DUF3107 domain-containing protein;protein_id=WP_003416863.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3580715 3581275 . + . ID=gene-AL55_RS21855;Name=AL55_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21855;old_locus_tag=AL55_03339 NZ_KK316828.1 Protein Homology CDS 3580715 3581275 . + 0 ID=cds-WP_003416868.1;Parent=gene-AL55_RS21855;Dbxref=GenBank:WP_003416868.1;Name=WP_003416868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217725.1;locus_tag=AL55_RS21855;product=MmpS family transport accessory protein;protein_id=WP_003416868.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3581285 3581980 . - . ID=gene-AL55_RS21860;Name=AL55_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21860;old_locus_tag=AL55_03340 NZ_KK316828.1 Protein Homology CDS 3581285 3581980 . - 0 ID=cds-WP_003416873.1;Parent=gene-AL55_RS21860;Dbxref=GenBank:WP_003416873.1;Name=WP_003416873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217726.1;locus_tag=AL55_RS21860;product=ferritin-like fold-containing protein;protein_id=WP_003416873.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3582239 3583822 . + . ID=gene-AL55_RS21865;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=AL55_RS21865;old_locus_tag=AL55_03341 NZ_KK316828.1 Protein Homology CDS 3582239 3583822 . + 0 ID=cds-WP_003416875.1;Parent=gene-AL55_RS21865;Dbxref=GenBank:WP_003416875.1;Name=WP_003416875.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;gene=rhlE;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217727.1;locus_tag=AL55_RS21865;product=DEAD/DEAH box helicase;protein_id=WP_003416875.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3583835 3585058 . + . ID=gene-AL55_RS21870;Name=AL55_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21870;old_locus_tag=AL55_03342 NZ_KK316828.1 Protein Homology CDS 3583835 3585058 . + 0 ID=cds-WP_003416876.1;Parent=gene-AL55_RS21870;Dbxref=GenBank:WP_003416876.1;Name=WP_003416876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217728.1;locus_tag=AL55_RS21870;product=Rv3212 family protein;protein_id=WP_003416876.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3585134 3585934 . - . ID=gene-AL55_RS21875;Name=AL55_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21875;old_locus_tag=AL55_03343 NZ_KK316828.1 Protein Homology CDS 3585134 3585934 . - 0 ID=cds-WP_003901572.1;Parent=gene-AL55_RS21875;Dbxref=GenBank:WP_003901572.1;Name=WP_003901572.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217729.1;locus_tag=AL55_RS21875;product=ParA family protein;protein_id=WP_003901572.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3586088 3586699 . + . ID=gene-AL55_RS21880;Name=AL55_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21880;old_locus_tag=AL55_03344 NZ_KK316828.1 Protein Homology CDS 3586088 3586699 . + 0 ID=cds-WP_003416878.1;Parent=gene-AL55_RS21880;Dbxref=GenBank:WP_003416878.1;Name=WP_003416878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177944.1;locus_tag=AL55_RS21880;product=acid phosphatase;protein_id=WP_003416878.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3586696 3587814 . + . ID=gene-AL55_RS21885;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=AL55_RS21885;old_locus_tag=AL55_03345 NZ_KK316828.1 Protein Homology CDS 3586696 3587814 . + 0 ID=cds-WP_003416879.1;Parent=gene-AL55_RS21885;Dbxref=GenBank:WP_003416879.1;Name=WP_003416879.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217731.1;locus_tag=AL55_RS21885;product=isochorismate synthase;protein_id=WP_003416879.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3587811 3588294 . + . ID=gene-AL55_RS0105475;Name=AL55_RS0105475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0105475;old_locus_tag=AL55_03346;pseudo=true NZ_KK316828.1 Protein Homology CDS 3587811 3588294 . + 0 ID=cds-AL55_RS0105475;Parent=gene-AL55_RS0105475;Note=frameshifted;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725920.1;locus_tag=AL55_RS0105475;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3588246 3588677 . - . ID=gene-AL55_RS21890;Name=AL55_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21890;old_locus_tag=AL55_03347 NZ_KK316828.1 Protein Homology CDS 3588246 3588677 . - 0 ID=cds-WP_003416881.1;Parent=gene-AL55_RS21890;Dbxref=GenBank:WP_003416881.1;Name=WP_003416881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217733.1;locus_tag=AL55_RS21890;product=hypothetical protein;protein_id=WP_003416881.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3588910 3589875 . + . ID=gene-AL55_RS21895;Name=AL55_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21895;old_locus_tag=AL55_03348 NZ_KK316828.1 Protein Homology CDS 3588910 3589875 . + 0 ID=cds-WP_003416883.1;Parent=gene-AL55_RS21895;Dbxref=GenBank:WP_003416883.1;Name=WP_003416883.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217734.1;locus_tag=AL55_RS21895;product=diacylglycerol/lipid kinase family protein;protein_id=WP_003416883.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3590155 3590409 . + . ID=gene-AL55_RS21900;Name=whiB1;gbkey=Gene;gene=whiB1;gene_biotype=protein_coding;locus_tag=AL55_RS21900;old_locus_tag=AL55_03349 NZ_KK316828.1 Protein Homology CDS 3590155 3590409 . + 0 ID=cds-WP_003416884.1;Parent=gene-AL55_RS21900;Dbxref=GenBank:WP_003416884.1;Name=WP_003416884.1;gbkey=CDS;gene=whiB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416884.1;locus_tag=AL55_RS21900;product=transcriptional regulator WhiB1;protein_id=WP_003416884.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3590471 3591976 . - . ID=gene-AL55_RS21905;Name=AL55_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21905;old_locus_tag=AL55_03350 NZ_KK316828.1 Protein Homology CDS 3590471 3591976 . - 0 ID=cds-WP_003901574.1;Parent=gene-AL55_RS21905;Dbxref=GenBank:WP_003901574.1;Name=WP_003901574.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217736.1;locus_tag=AL55_RS21905;product=sensor histidine kinase;protein_id=WP_003901574.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3591993 3592208 . - . ID=gene-AL55_RS21910;Name=AL55_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21910;old_locus_tag=AL55_03351 NZ_KK316828.1 Protein Homology CDS 3591993 3592208 . - 0 ID=cds-WP_003416887.1;Parent=gene-AL55_RS21910;Dbxref=GenBank:WP_003416887.1;Name=WP_003416887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217737.1;locus_tag=AL55_RS21910;product=biotin/lipoyl-binding carrier protein;protein_id=WP_003416887.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3592409 3592483 . + . ID=gene-AL55_RS28280;Name=AL55_RS28280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28280 NZ_KK316828.1 Protein Homology CDS 3592409 3592483 . + 0 ID=cds-WP_003416889.1;Parent=gene-AL55_RS28280;Dbxref=GenBank:WP_003416889.1;Name=WP_003416889.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_149429506.1;locus_tag=AL55_RS28280;product=50S ribosomal protein bL37;protein_id=WP_003416889.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3592493 3592798 . - . ID=gene-AL55_RS21915;Name=rsrA;gbkey=Gene;gene=rsrA;gene_biotype=protein_coding;locus_tag=AL55_RS21915;old_locus_tag=AL55_03352 NZ_KK316828.1 Protein Homology CDS 3592493 3592798 . - 0 ID=cds-WP_003416891.1;Parent=gene-AL55_RS21915;Dbxref=GenBank:WP_003416891.1;Name=WP_003416891.1;Ontology_term=GO:0045454,GO:0016989;gbkey=CDS;gene=rsrA;go_function=sigma factor antagonist activity|0016989||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177945.1;locus_tag=AL55_RS21915;product=mycothiol system anti-sigma-R factor;protein_id=WP_003416891.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3592795 3593346 . - . ID=gene-AL55_RS21920;Name=AL55_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21920;old_locus_tag=AL55_03353 NZ_KK316828.1 Protein Homology CDS 3592795 3593346 . - 0 ID=cds-WP_003899976.1;Parent=gene-AL55_RS21920;Dbxref=GenBank:WP_003899976.1;Name=WP_003899976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217738.1;locus_tag=AL55_RS21920;product=hypothetical protein;protein_id=WP_003899976.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3593343 3593993 . - . ID=gene-AL55_RS21925;Name=sigH;gbkey=Gene;gene=sigH;gene_biotype=protein_coding;locus_tag=AL55_RS21925;old_locus_tag=AL55_03354 NZ_KK316828.1 Protein Homology CDS 3593343 3593993 . - 0 ID=cds-WP_003416897.1;Parent=gene-AL55_RS21925;Dbxref=GenBank:WP_003416897.1;Name=WP_003416897.1;gbkey=CDS;gene=sigH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217739.1;locus_tag=AL55_RS21925;product=sigma-70 family RNA polymerase sigma factor SigH;protein_id=WP_003416897.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3594293 3595141 . + . ID=gene-AL55_RS21930;Name=AL55_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21930;old_locus_tag=AL55_03355 NZ_KK316828.1 Protein Homology CDS 3594293 3595141 . + 0 ID=cds-WP_003416899.1;Parent=gene-AL55_RS21930;Dbxref=GenBank:WP_003416899.1;Name=WP_003416899.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217740.1;locus_tag=AL55_RS21930;product=SDR family oxidoreductase;protein_id=WP_003416899.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3595077 3595265 . + . ID=gene-AL55_RS28130;Name=AL55_RS28130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28130;old_locus_tag=AL55_03356 NZ_KK316828.1 Protein Homology CDS 3595077 3595265 . + 0 ID=cds-WP_003416901.1;Parent=gene-AL55_RS28130;Dbxref=GenBank:WP_003416901.1;Name=WP_003416901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294273.1;locus_tag=AL55_RS28130;product=hypothetical protein;protein_id=WP_003416901.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3595243 3595461 . + . ID=gene-AL55_RS21940;Name=AL55_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21940;old_locus_tag=AL55_03357 NZ_KK316828.1 Protein Homology CDS 3595243 3595461 . + 0 ID=cds-WP_003416902.1;Parent=gene-AL55_RS21940;Dbxref=GenBank:WP_003416902.1;Name=WP_003416902.1;Ontology_term=GO:0002161;gbkey=CDS;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416902.1;locus_tag=AL55_RS21940;product=YbaK/EbsC family protein;protein_id=WP_003416902.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3595458 3596882 . - . ID=gene-AL55_RS21945;Name=AL55_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21945;old_locus_tag=AL55_03358 NZ_KK316828.1 Protein Homology CDS 3595458 3596882 . - 0 ID=cds-WP_003899979.1;Parent=gene-AL55_RS21945;Dbxref=GenBank:WP_003899979.1;Name=WP_003899979.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217742.1;locus_tag=AL55_RS21945;product=GNAT family N-acetyltransferase;protein_id=WP_003899979.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3597006 3597764 . - . ID=gene-AL55_RS21950;Name=AL55_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21950;old_locus_tag=AL55_03359 NZ_KK316828.1 Protein Homology CDS 3597006 3597764 . - 0 ID=cds-WP_003416907.1;Parent=gene-AL55_RS21950;Dbxref=GenBank:WP_003416907.1;Name=WP_003416907.1;Ontology_term=GO:0009432,GO:0003697,GO:0008233;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,peptidase activity|0008233||IEA;go_process=SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217743.1;locus_tag=AL55_RS21950;product=SOS response-associated peptidase;protein_id=WP_003416907.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3597819 3599171 . + . ID=gene-AL55_RS21955;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AL55_RS21955;old_locus_tag=AL55_03360 NZ_KK316828.1 Protein Homology CDS 3597819 3599171 . + 0 ID=cds-WP_003416914.1;Parent=gene-AL55_RS21955;Dbxref=GenBank:WP_003416914.1;Name=WP_003416914.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217744.1;locus_tag=AL55_RS21955;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_003416914.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3599168 3600160 . + . ID=gene-AL55_RS21960;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AL55_RS21960;old_locus_tag=AL55_03361 NZ_KK316828.1 Protein Homology CDS 3599168 3600160 . + 0 ID=cds-WP_003416916.1;Parent=gene-AL55_RS21960;Dbxref=GenBank:WP_003416916.1;Name=WP_003416916.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217745.1;locus_tag=AL55_RS21960;product=ribosome small subunit-dependent GTPase A;protein_id=WP_003416916.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3600193 3601476 . - . ID=gene-AL55_RS21965;Name=desA3;gbkey=Gene;gene=desA3;gene_biotype=protein_coding;locus_tag=AL55_RS21965;old_locus_tag=AL55_03362 NZ_KK316828.1 Protein Homology CDS 3600193 3601476 . - 0 ID=cds-WP_003416919.1;Parent=gene-AL55_RS21965;Dbxref=GenBank:WP_003416919.1;Name=WP_003416919.1;gbkey=CDS;gene=desA3;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177948.1;locus_tag=AL55_RS21965;product=NADPH-dependent stearoyl-CoA 9-desaturase;protein_id=WP_003416919.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3601554 3602696 . - . ID=gene-AL55_RS21970;Name=AL55_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21970;old_locus_tag=AL55_03363 NZ_KK316828.1 Protein Homology CDS 3601554 3602696 . - 0 ID=cds-WP_003416922.1;Parent=gene-AL55_RS21970;Dbxref=GenBank:WP_003416922.1;Name=WP_003416922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217747.1;locus_tag=AL55_RS21970;product=NADPH oxidoreductase;protein_id=WP_003416922.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3602806 3603315 . - . ID=gene-AL55_RS21975;Name=AL55_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21975;old_locus_tag=AL55_03364 NZ_KK316828.1 Protein Homology CDS 3602806 3603315 . - 0 ID=cds-WP_003416925.1;Parent=gene-AL55_RS21975;Dbxref=GenBank:WP_003416925.1;Name=WP_003416925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217748.1;locus_tag=AL55_RS21975;product=DUF6912 family protein;protein_id=WP_003416925.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3603312 3604178 . - . ID=gene-AL55_RS21980;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=AL55_RS21980;old_locus_tag=AL55_03365 NZ_KK316828.1 Protein Homology CDS 3603312 3604178 . - 0 ID=cds-WP_009938021.1;Parent=gene-AL55_RS21980;Dbxref=GenBank:WP_009938021.1;Name=WP_009938021.1;Ontology_term=GO:0006793,GO:0008976;gbkey=CDS;gene=ppk2;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020788356.1;locus_tag=AL55_RS21980;product=polyphosphate kinase 2;protein_id=WP_009938021.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3604223 3605632 . - . ID=gene-AL55_RS0105490;Name=AL55_RS0105490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105490 NZ_KK316828.1 Protein Homology CDS 3604223 3605632 . - 0 ID=cds-WP_003416930.1;Parent=gene-AL55_RS0105490;Dbxref=GenBank:WP_003416930.1;Name=WP_003416930.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001636.1;locus_tag=AL55_RS0105490;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003416930.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3605833 3606384 . + . ID=gene-AL55_RS21985;Name=AL55_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21985;old_locus_tag=AL55_03368 NZ_KK316828.1 Protein Homology CDS 3605833 3606384 . + 0 ID=cds-WP_003912151.1;Parent=gene-AL55_RS21985;Dbxref=GenBank:WP_003912151.1;Name=WP_003912151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291303.1;locus_tag=AL55_RS21985;product=Rv3235 family protein;protein_id=WP_003912151.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3606402 3607559 . - . ID=gene-AL55_RS21990;Name=AL55_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21990;old_locus_tag=AL55_03369 NZ_KK316828.1 Protein Homology CDS 3606402 3607559 . - 0 ID=cds-WP_003902432.1;Parent=gene-AL55_RS21990;Dbxref=GenBank:WP_003902432.1;Name=WP_003902432.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177949.1;locus_tag=AL55_RS21990;product=cation:proton antiporter;protein_id=WP_003902432.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3607564 3608046 . - . ID=gene-AL55_RS21995;Name=AL55_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS21995;old_locus_tag=AL55_03370 NZ_KK316828.1 Protein Homology CDS 3607564 3608046 . - 0 ID=cds-WP_003899982.1;Parent=gene-AL55_RS21995;Dbxref=GenBank:WP_003899982.1;Name=WP_003899982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217754.1;locus_tag=AL55_RS21995;product=cation:proton antiporter regulatory subunit;protein_id=WP_003899982.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3608107 3608841 . - . ID=gene-AL55_RS22000;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=AL55_RS22000;old_locus_tag=AL55_03371 NZ_KK316828.1 Protein Homology CDS 3608107 3608841 . - 0 ID=cds-WP_003416945.1;Parent=gene-AL55_RS22000;Dbxref=GenBank:WP_003416945.1;Name=WP_003416945.1;Ontology_term=GO:0008168;gbkey=CDS;gene=mddA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217755.1;locus_tag=AL55_RS22000;product=methanethiol S-methyltransferase;protein_id=WP_003416945.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3608900 3612046 . - . ID=gene-AL55_RS22005;Name=AL55_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22005;old_locus_tag=AL55_03372 NZ_KK316828.1 Protein Homology CDS 3608900 3612046 . - 0 ID=cds-WP_003900661.1;Parent=gene-AL55_RS22005;Dbxref=GenBank:WP_003900661.1;Name=WP_003900661.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217756.1;locus_tag=AL55_RS22005;product=MFS transporter;protein_id=WP_003900661.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3612125 3614974 . - . ID=gene-AL55_RS22010;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AL55_RS22010;old_locus_tag=AL55_03373 NZ_KK316828.1 Protein Homology CDS 3612125 3614974 . - 0 ID=cds-WP_003901576.1;Parent=gene-AL55_RS22010;Dbxref=GenBank:WP_003901576.1;Name=WP_003901576.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177950.1;locus_tag=AL55_RS22010;product=preprotein translocase subunit SecA;protein_id=WP_003901576.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3615053 3615697 . - . ID=gene-AL55_RS22015;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=AL55_RS22015;old_locus_tag=AL55_03374 NZ_KK316828.1 Protein Homology CDS 3615053 3615697 . - 0 ID=cds-WP_003416957.1;Parent=gene-AL55_RS22015;Dbxref=GenBank:WP_003416957.1;Name=WP_003416957.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217758.3;locus_tag=AL55_RS22015;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_003416957.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3616013 3616654 . - . ID=gene-AL55_RS22020;Name=AL55_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22020;old_locus_tag=AL55_03375 NZ_KK316828.1 Protein Homology CDS 3616013 3616654 . - 0 ID=cds-WP_003416963.1;Parent=gene-AL55_RS22020;Dbxref=GenBank:WP_003416963.1;Name=WP_003416963.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217759.1;locus_tag=AL55_RS22020;product=ComF family protein;protein_id=WP_003416963.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3616692 3617534 . - . ID=gene-AL55_RS22025;Name=AL55_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22025;old_locus_tag=AL55_03376 NZ_KK316828.1 Protein Homology CDS 3616692 3617534 . - 0 ID=cds-WP_003416966.1;Parent=gene-AL55_RS22025;Dbxref=GenBank:WP_003416966.1;Name=WP_003416966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217760.1;locus_tag=AL55_RS22025;product=LmeA family phospholipid-binding protein;protein_id=WP_003416966.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3617602 3619353 . - . ID=gene-AL55_RS22030;Name=lpqB;gbkey=Gene;gene=lpqB;gene_biotype=protein_coding;locus_tag=AL55_RS22030;old_locus_tag=AL55_03377 NZ_KK316828.1 Protein Homology CDS 3617602 3619353 . - 0 ID=cds-WP_003901578.1;Parent=gene-AL55_RS22030;Dbxref=GenBank:WP_003901578.1;Name=WP_003901578.1;gbkey=CDS;gene=lpqB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217761.1;locus_tag=AL55_RS22030;product=MtrAB system accessory lipoprotein LpqB;protein_id=WP_003901578.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3619353 3621056 . - . ID=gene-AL55_RS22035;Name=mtrB;gbkey=Gene;gene=mtrB;gene_biotype=protein_coding;locus_tag=AL55_RS22035;old_locus_tag=AL55_03378 NZ_KK316828.1 Protein Homology CDS 3619353 3621056 . - 0 ID=cds-WP_003906038.1;Parent=gene-AL55_RS22035;Dbxref=GenBank:WP_003906038.1;Name=WP_003906038.1;gbkey=CDS;gene=mtrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217762.1;locus_tag=AL55_RS22035;product=two-component system sensor histidine kinase MtrB;protein_id=WP_003906038.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3621106 3621792 . - . ID=gene-AL55_RS22040;Name=mtrA;gbkey=Gene;gene=mtrA;gene_biotype=protein_coding;locus_tag=AL55_RS22040;old_locus_tag=AL55_03379 NZ_KK316828.1 Protein Homology CDS 3621106 3621792 . - 0 ID=cds-WP_003899985.1;Parent=gene-AL55_RS22040;Dbxref=GenBank:WP_003899985.1;Name=WP_003899985.1;gbkey=CDS;gene=mtrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217763.1;locus_tag=AL55_RS22040;product=two-component system response regulator MtrA;protein_id=WP_003899985.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3621862 3622512 . - . ID=gene-AL55_RS22045;Name=tmk;end_range=3622512,.;gbkey=Gene;gene=tmk;gene_biotype=pseudogene;locus_tag=AL55_RS22045;old_locus_tag=AL55_03380;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 3621862 3622512 . - 0 ID=cds-AL55_RS22045;Parent=gene-AL55_RS22045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006233,GO:0004798,GO:0005524;end_range=3622512,.;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217764.1;locus_tag=AL55_RS22045;partial=true;product=dTMP kinase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3622603 3624090 . - . ID=gene-AL55_RS22050;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=AL55_RS22050;old_locus_tag=AL55_03381 NZ_KK316828.1 Protein Homology CDS 3622603 3624090 . - 0 ID=cds-WP_003417039.1;Parent=gene-AL55_RS22050;Dbxref=GenBank:WP_003417039.1;Name=WP_003417039.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217765.1;locus_tag=AL55_RS22050;product=adenosylhomocysteinase;protein_id=WP_003417039.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3624195 3624830 . - . ID=gene-AL55_RS22055;Name=alkX;gbkey=Gene;gene=alkX;gene_biotype=protein_coding;locus_tag=AL55_RS22055;old_locus_tag=AL55_03382 NZ_KK316828.1 Protein Homology CDS 3624195 3624830 . - 0 ID=cds-WP_003417042.1;Parent=gene-AL55_RS22055;Dbxref=GenBank:WP_003417042.1;Name=WP_003417042.1;gbkey=CDS;gene=alkX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217766.1;locus_tag=AL55_RS22055;product=TetR family transcriptional regulator AlkX;protein_id=WP_003417042.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3624827 3625009 . - . ID=gene-AL55_RS22060;Name=rubB;gbkey=Gene;gene=rubB;gene_biotype=protein_coding;locus_tag=AL55_RS22060;old_locus_tag=AL55_03383 NZ_KK316828.1 Protein Homology CDS 3624827 3625009 . - 0 ID=cds-WP_003417044.1;Parent=gene-AL55_RS22060;Dbxref=GenBank:WP_003417044.1;Name=WP_003417044.1;gbkey=CDS;gene=rubB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217767.1;locus_tag=AL55_RS22060;product=rubredoxin RubB;protein_id=WP_003417044.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3625014 3625181 . - . ID=gene-AL55_RS22065;Name=rubA;gbkey=Gene;gene=rubA;gene_biotype=protein_coding;locus_tag=AL55_RS22065;old_locus_tag=AL55_03384 NZ_KK316828.1 Protein Homology CDS 3625014 3625181 . - 0 ID=cds-WP_003417045.1;Parent=gene-AL55_RS22065;Dbxref=GenBank:WP_003417045.1;Name=WP_003417045.1;Ontology_term=GO:0043448,GO:0005506,GO:0009055;gbkey=CDS;gene=rubA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=alkane catabolic process|0043448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217768.1;locus_tag=AL55_RS22065;product=rubredoxin;protein_id=WP_003417045.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3625181 3626431 . - . ID=gene-AL55_RS22070;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=AL55_RS22070;old_locus_tag=AL55_03385 NZ_KK316828.1 Protein Homology CDS 3625181 3626431 . - 0 ID=cds-WP_003417047.1;Parent=gene-AL55_RS22070;Dbxref=GenBank:WP_003417047.1;Name=WP_003417047.1;Ontology_term=GO:0016491;gbkey=CDS;gene=alkB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217769.1;locus_tag=AL55_RS22070;product=alkane 1-monooxygenase;protein_id=WP_003417047.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3626540 3628027 . - . ID=gene-AL55_RS22075;Name=AL55_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22075;old_locus_tag=AL55_03386 NZ_KK316828.1 Protein Homology CDS 3626540 3628027 . - 0 ID=cds-WP_003417049.1;Parent=gene-AL55_RS22075;Dbxref=GenBank:WP_003417049.1;Name=WP_003417049.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217770.1;locus_tag=AL55_RS22075;product=amino acid permease;protein_id=WP_003417049.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3628118 3629506 . + . ID=gene-AL55_RS22080;Name=AL55_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22080;old_locus_tag=AL55_03387 NZ_KK316828.1 Protein Homology CDS 3628118 3629506 . + 0 ID=cds-WP_003417051.1;Parent=gene-AL55_RS22080;Dbxref=GenBank:WP_003417051.1;Name=WP_003417051.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217771.1;locus_tag=AL55_RS22080;product=FAD-dependent oxidoreductase;protein_id=WP_003417051.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3629484 3630710 . - . ID=gene-AL55_RS22085;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=AL55_RS22085;old_locus_tag=AL55_03388 NZ_KK316828.1 Protein Homology CDS 3629484 3630710 . - 0 ID=cds-WP_003417054.1;Parent=gene-AL55_RS22085;Dbxref=GenBank:WP_003417054.1;Name=WP_003417054.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217772.1;locus_tag=AL55_RS22085;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_003417054.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3630718 3631758 . - . ID=gene-AL55_RS22090;Name=AL55_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22090;old_locus_tag=AL55_03389 NZ_KK316828.1 Protein Homology CDS 3630718 3631758 . - 0 ID=cds-WP_003417056.1;Parent=gene-AL55_RS22090;Dbxref=GenBank:WP_003417056.1;Name=WP_003417056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217773.1;locus_tag=AL55_RS22090;product=hypothetical protein;protein_id=WP_003417056.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3631755 3633152 . - . ID=gene-AL55_RS22095;Name=pmmA;gbkey=Gene;gene=pmmA;gene_biotype=protein_coding;locus_tag=AL55_RS22095;old_locus_tag=AL55_03390 NZ_KK316828.1 Protein Homology CDS 3631755 3633152 . - 0 ID=cds-WP_003901581.1;Parent=gene-AL55_RS22095;Dbxref=GenBank:WP_003901581.1;Name=WP_003901581.1;Ontology_term=GO:0005975,GO:0016868;gbkey=CDS;gene=pmmA;go_function=intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217774.1;locus_tag=AL55_RS22095;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_003901581.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3633254 3633694 . - . ID=gene-AL55_RS22100;Name=AL55_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22100;old_locus_tag=AL55_03391 NZ_KK316828.1 Protein Homology CDS 3633254 3633694 . - 0 ID=cds-WP_180744027.1;Parent=gene-AL55_RS22100;Dbxref=GenBank:WP_180744027.1;Name=WP_180744027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014208879.1;locus_tag=AL55_RS22100;product=DUF3499 domain-containing protein;protein_id=WP_180744027.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3633868 3634287 . + . ID=gene-AL55_RS22105;Name=AL55_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22105;old_locus_tag=AL55_03392 NZ_KK316828.1 Protein Homology CDS 3633868 3634287 . + 0 ID=cds-WP_003417076.1;Parent=gene-AL55_RS22105;Dbxref=GenBank:WP_003417076.1;Name=WP_003417076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217776.1;locus_tag=AL55_RS22105;product=metallopeptidase family protein;protein_id=WP_003417076.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3634315 3634659 . - . ID=gene-AL55_RS0105495;Name=AL55_RS0105495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105495;old_locus_tag=AL55_03393 NZ_KK316828.1 Protein Homology CDS 3634315 3634659 . - 0 ID=cds-WP_003900662.1;Parent=gene-AL55_RS0105495;Dbxref=GenBank:WP_003900662.1;Name=WP_003900662.1;Ontology_term=GO:0003677,GO:0046872,GO:0051536,GO:0051539;gbkey=CDS;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725952.1;locus_tag=AL55_RS0105495;product=WhiB family transcriptional regulator;protein_id=WP_003900662.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3634986 3635981 . + . ID=gene-AL55_RS22110;Name=cofD;gbkey=Gene;gene=cofD;gene_biotype=protein_coding;locus_tag=AL55_RS22110;old_locus_tag=AL55_03394 NZ_KK316828.1 Protein Homology CDS 3634986 3635981 . + 0 ID=cds-WP_003417087.1;Parent=gene-AL55_RS22110;Dbxref=GenBank:WP_003417087.1;Name=WP_003417087.1;Ontology_term=GO:0000287,GO:0043743;gbkey=CDS;gene=cofD;go_function=magnesium ion binding|0000287||IEA,LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217778.1;locus_tag=AL55_RS22110;product=2-phospho-L-lactate transferase;protein_id=WP_003417087.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3635978 3637324 . + . ID=gene-AL55_RS22115;Name=fbiB;gbkey=Gene;gene=fbiB;gene_biotype=protein_coding;locus_tag=AL55_RS22115;old_locus_tag=AL55_03395 NZ_KK316828.1 Protein Homology CDS 3635978 3637324 . + 0 ID=cds-WP_003900663.1;Parent=gene-AL55_RS22115;Dbxref=GenBank:WP_003900663.1;Name=WP_003900663.1;Ontology_term=GO:0043773,GO:0046872;gbkey=CDS;gene=fbiB;go_function=coenzyme F420-0 gamma-glutamyl ligase activity|0043773||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217779.1;locus_tag=AL55_RS22115;product=coenzyme F420-0:L-glutamate ligase;protein_id=WP_003900663.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3637620 3639281 . + . ID=gene-AL55_RS22120;Name=AL55_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22120;old_locus_tag=AL55_03396 NZ_KK316828.1 Protein Homology CDS 3637620 3639281 . + 0 ID=cds-WP_003902435.1;Parent=gene-AL55_RS22120;Dbxref=GenBank:WP_003902435.1;Name=WP_003902435.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217780.1;locus_tag=AL55_RS22120;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=WP_003902435.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3639341 3640420 . - . ID=gene-AL55_RS22125;Name=manB;gbkey=Gene;gene=manB;gene_biotype=protein_coding;locus_tag=AL55_RS22125;old_locus_tag=AL55_03397 NZ_KK316828.1 Protein Homology CDS 3639341 3640420 . - 0 ID=cds-WP_003417097.1;Parent=gene-AL55_RS22125;Dbxref=GenBank:WP_003417097.1;Name=WP_003417097.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;gene=manB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177951.1;locus_tag=AL55_RS22125;product=mannose-1-phosphate guanylyltransferase;protein_id=WP_003417097.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3640422 3641327 . - . ID=gene-AL55_RS22130;Name=wbbL;gbkey=Gene;gene=wbbL;gene_biotype=protein_coding;locus_tag=AL55_RS22130;old_locus_tag=AL55_03398 NZ_KK316828.1 Protein Homology CDS 3640422 3641327 . - 0 ID=cds-WP_003901582.1;Parent=gene-AL55_RS22130;Dbxref=GenBank:WP_003901582.1;Name=WP_003901582.1;gbkey=CDS;gene=wbbL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177952.3;locus_tag=AL55_RS22130;product=N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase;protein_id=WP_003901582.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3641338 3642252 . - . ID=gene-AL55_RS22135;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=AL55_RS22135;old_locus_tag=AL55_03399 NZ_KK316828.1 Protein Homology CDS 3641338 3642252 . - 0 ID=cds-WP_003899993.1;Parent=gene-AL55_RS22135;Dbxref=GenBank:WP_003899993.1;Name=WP_003899993.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217783.1;locus_tag=AL55_RS22135;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_003899993.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3642328 3643824 . + . ID=gene-AL55_RS22140;Name=lcp1;gbkey=Gene;gene=lcp1;gene_biotype=protein_coding;locus_tag=AL55_RS22140;old_locus_tag=AL55_03400 NZ_KK316828.1 Protein Homology CDS 3642328 3643824 . + 0 ID=cds-WP_003417107.1;Parent=gene-AL55_RS22140;Dbxref=GenBank:WP_003417107.1;Name=WP_003417107.1;gbkey=CDS;gene=lcp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217784.1;locus_tag=AL55_RS22140;product=arabinogalactan--peptidoglycan phosphotransferase Lcp1;protein_id=WP_003417107.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3643812 3644552 . + . ID=gene-AL55_RS22145;Name=AL55_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22145;old_locus_tag=AL55_03401 NZ_KK316828.1 Protein Homology CDS 3643812 3644552 . + 0 ID=cds-WP_003899994.1;Parent=gene-AL55_RS22145;Dbxref=GenBank:WP_003899994.1;Name=WP_003899994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899994.1;locus_tag=AL55_RS22145;product=TIGR03089 family protein;protein_id=WP_003899994.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3644677 3644958 . + . ID=gene-AL55_RS22150;Name=AL55_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22150;old_locus_tag=AL55_03402 NZ_KK316828.1 Protein Homology CDS 3644677 3644958 . + 0 ID=cds-WP_003417115.1;Parent=gene-AL55_RS22150;Dbxref=GenBank:WP_003417115.1;Name=WP_003417115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217786.1;locus_tag=AL55_RS22150;product=DUF1490 family protein;protein_id=WP_003417115.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3644969 3647125 . + . ID=gene-AL55_RS22155;Name=ctpC;gbkey=Gene;gene=ctpC;gene_biotype=protein_coding;locus_tag=AL55_RS22155;old_locus_tag=AL55_03403 NZ_KK316828.1 Protein Homology CDS 3644969 3647125 . + 0 ID=cds-WP_003899995.1;Parent=gene-AL55_RS22155;Dbxref=GenBank:WP_003899995.1;Name=WP_003899995.1;gbkey=CDS;gene=ctpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217787.1;locus_tag=AL55_RS22155;product=manganese-exporting P-type ATPase CtpC;protein_id=WP_003899995.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3647122 3647790 . - . ID=gene-AL55_RS22160;Name=AL55_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22160;old_locus_tag=AL55_03404 NZ_KK316828.1 Protein Homology CDS 3647122 3647790 . - 0 ID=cds-WP_003417119.1;Parent=gene-AL55_RS22160;Dbxref=GenBank:WP_003417119.1;Name=WP_003417119.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217788.1;locus_tag=AL55_RS22160;product=cation efflux transmembrane domain-containing protein;protein_id=WP_003417119.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3647891 3649075 . + . ID=gene-AL55_RS22165;Name=AL55_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22165;old_locus_tag=AL55_03405 NZ_KK316828.1 Protein Homology CDS 3647891 3649075 . + 0 ID=cds-WP_003901586.1;Parent=gene-AL55_RS22165;Dbxref=GenBank:WP_003901586.1;Name=WP_003901586.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217789.1;locus_tag=AL55_RS22165;product=CoA transferase;protein_id=WP_003901586.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3649104 3651374 . + . ID=gene-AL55_RS22170;Name=AL55_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22170;old_locus_tag=AL55_03406 NZ_KK316828.1 Protein Homology CDS 3649104 3651374 . + 0 ID=cds-WP_003917141.1;Parent=gene-AL55_RS22170;Dbxref=GenBank:WP_003917141.1;Name=WP_003917141.1;Ontology_term=GO:1902358,GO:0015116,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303796.1;locus_tag=AL55_RS22170;product=SulP family inorganic anion transporter;protein_id=WP_003917141.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3651363 3652532 . - . ID=gene-AL55_RS22175;Name=AL55_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22175;old_locus_tag=AL55_03407 NZ_KK316828.1 Protein Homology CDS 3651363 3652532 . - 0 ID=cds-WP_003417122.1;Parent=gene-AL55_RS22175;Dbxref=GenBank:WP_003417122.1;Name=WP_003417122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217791.1;locus_tag=AL55_RS22175;product=acyl-CoA dehydrogenase;protein_id=WP_003417122.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3652557 3653081 . - . ID=gene-AL55_RS22180;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AL55_RS22180;old_locus_tag=AL55_03408 NZ_KK316828.1 Protein Homology CDS 3652557 3653081 . - 0 ID=cds-WP_003899997.1;Parent=gene-AL55_RS22180;Dbxref=GenBank:WP_003899997.1;Name=WP_003899997.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217792.1;locus_tag=AL55_RS22180;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_003899997.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3653078 3654367 . - . ID=gene-AL55_RS22185;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=AL55_RS22185;old_locus_tag=AL55_03409 NZ_KK316828.1 Protein Homology CDS 3653078 3654367 . - 0 ID=cds-WP_003417126.1;Parent=gene-AL55_RS22185;Dbxref=GenBank:WP_003417126.1;Name=WP_003417126.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217793.1;locus_tag=AL55_RS22185;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_003417126.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3654468 3655139 . + . ID=gene-AL55_RS22190;Name=AL55_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22190;old_locus_tag=AL55_03410 NZ_KK316828.1 Protein Homology CDS 3654468 3655139 . + 0 ID=cds-WP_003417128.1;Parent=gene-AL55_RS22190;Dbxref=GenBank:WP_003417128.1;Name=WP_003417128.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874529.1;locus_tag=AL55_RS22190;product=GtrA family protein;protein_id=WP_003417128.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3655094 3655612 . - . ID=gene-AL55_RS22195;Name=AL55_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22195;old_locus_tag=AL55_03411 NZ_KK316828.1 Protein Homology CDS 3655094 3655612 . - 0 ID=cds-WP_003417130.1;Parent=gene-AL55_RS22195;Dbxref=GenBank:WP_003417130.1;Name=WP_003417130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217795.1;locus_tag=AL55_RS22195;product=PH domain-containing protein;protein_id=WP_003417130.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3655655 3656455 . - . ID=gene-AL55_RS22200;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=AL55_RS22200;old_locus_tag=AL55_03412 NZ_KK316828.1 Protein Homology CDS 3655655 3656455 . - 0 ID=cds-WP_003899999.1;Parent=gene-AL55_RS22200;Dbxref=GenBank:WP_003899999.1;Name=WP_003899999.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217796.1;locus_tag=AL55_RS22200;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_003899999.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3656505 3658151 . + . ID=gene-AL55_RS22205;Name=AL55_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22205;old_locus_tag=AL55_03413 NZ_KK316828.1 Protein Homology CDS 3656505 3658151 . + 0 ID=cds-WP_003417136.1;Parent=gene-AL55_RS22205;Dbxref=GenBank:WP_003417136.1;Name=WP_003417136.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217797.1;locus_tag=AL55_RS22205;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003417136.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3658132 3658593 . + . ID=gene-AL55_RS22210;Name=AL55_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22210;old_locus_tag=AL55_03414 NZ_KK316828.1 Protein Homology CDS 3658132 3658593 . + 0 ID=cds-WP_031653637.1;Parent=gene-AL55_RS22210;Dbxref=GenBank:WP_031653637.1;Name=WP_031653637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217798.1;locus_tag=AL55_RS22210;product=acyl-CoA carboxylase subunit epsilon;protein_id=WP_031653637.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3658590 3659258 . + . ID=gene-AL55_RS22215;Name=AL55_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22215;old_locus_tag=AL55_03415 NZ_KK316828.1 Protein Homology CDS 3658590 3659258 . + 0 ID=cds-WP_003906045.1;Parent=gene-AL55_RS22215;Dbxref=GenBank:WP_003906045.1;Name=WP_003906045.1;Ontology_term=GO:0009117,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217799.1;locus_tag=AL55_RS22215;product=nucleoside triphosphate pyrophosphatase;protein_id=WP_003906045.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3659299 3660192 . + . ID=gene-AL55_RS22220;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=AL55_RS22220;old_locus_tag=AL55_03416 NZ_KK316828.1 Protein Homology CDS 3659299 3660192 . + 0 ID=cds-WP_003906046.1;Parent=gene-AL55_RS22220;Dbxref=GenBank:WP_003906046.1;Name=WP_003906046.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;gene=sseA;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217800.1;locus_tag=AL55_RS22220;product=sulfurtransferase;protein_id=WP_003906046.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3660189 3660620 . + . ID=gene-AL55_RS22225;Name=AL55_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22225;old_locus_tag=AL55_03417 NZ_KK316828.1 Protein Homology CDS 3660189 3660620 . + 0 ID=cds-WP_003417152.1;Parent=gene-AL55_RS22225;Dbxref=GenBank:WP_003417152.1;Name=WP_003417152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217801.1;locus_tag=AL55_RS22225;product=SufE family protein;protein_id=WP_003417152.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3660728 3662530 . + . ID=gene-AL55_RS22230;Name=AL55_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22230;old_locus_tag=AL55_03418 NZ_KK316828.1 Protein Homology CDS 3660728 3662530 . + 0 ID=cds-WP_003417156.1;Parent=gene-AL55_RS22230;Dbxref=GenBank:WP_003417156.1;Name=WP_003417156.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217802.1;locus_tag=AL55_RS22230;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_003417156.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3662540 3663325 . - . ID=gene-AL55_RS22235;Name=sigF;gbkey=Gene;gene=sigF;gene_biotype=protein_coding;locus_tag=AL55_RS22235;old_locus_tag=AL55_03419 NZ_KK316828.1 Protein Homology CDS 3662540 3663325 . - 0 ID=cds-WP_003417158.1;Parent=gene-AL55_RS22235;Dbxref=GenBank:WP_003417158.1;Name=WP_003417158.1;gbkey=CDS;gene=sigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217803.1;locus_tag=AL55_RS22235;product=RNA polymerase sigma factor SigF;protein_id=WP_003417158.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3663322 3663759 . - . ID=gene-AL55_RS22240;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=AL55_RS22240;old_locus_tag=AL55_03420 NZ_KK316828.1 Protein Homology CDS 3663322 3663759 . - 0 ID=cds-WP_003417160.1;Parent=gene-AL55_RS22240;Dbxref=GenBank:WP_003417160.1;Name=WP_003417160.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217804.4;locus_tag=AL55_RS22240;product=anti-sigma B factor RsbW;protein_id=WP_003417160.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3663957 3664268 . - . ID=gene-AL55_RS0105510;Name=usfY;gbkey=Gene;gene=usfY;gene_biotype=protein_coding;locus_tag=AL55_RS0105510;old_locus_tag=AL55_03421 NZ_KK316828.1 Protein Homology CDS 3663957 3664268 . - 0 ID=cds-WP_003900003.1;Parent=gene-AL55_RS0105510;Dbxref=GenBank:WP_003900003.1;Name=WP_003900003.1;gbkey=CDS;gene=usfY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900003.1;locus_tag=AL55_RS0105510;product=protein UsfY;protein_id=WP_003900003.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3664405 3664782 . - . ID=gene-AL55_RS22245;Name=AL55_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22245;old_locus_tag=AL55_03422 NZ_KK316828.1 Protein Homology CDS 3664405 3664782 . - 0 ID=cds-WP_003417165.1;Parent=gene-AL55_RS22245;Dbxref=GenBank:WP_003417165.1;Name=WP_003417165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217806.1;locus_tag=AL55_RS22245;product=hypothetical protein;protein_id=WP_003417165.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3664816 3666165 . - . ID=gene-AL55_RS22250;Name=lat;gbkey=Gene;gene=lat;gene_biotype=protein_coding;locus_tag=AL55_RS22250;old_locus_tag=AL55_03423 NZ_KK316828.1 Protein Homology CDS 3664816 3666165 . - 0 ID=cds-WP_003900004.1;Parent=gene-AL55_RS22250;Dbxref=GenBank:WP_003900004.1;Name=WP_003900004.1;Ontology_term=GO:0017000,GO:0030170,GO:0045484;gbkey=CDS;gene=lat;go_function=pyridoxal phosphate binding|0030170||IEA,L-lysine 6-transaminase activity|0045484||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217807.1;locus_tag=AL55_RS22250;product=L-lysine 6-transaminase;protein_id=WP_003900004.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3666216 3666668 . - . ID=gene-AL55_RS22255;Name=lrpA;gbkey=Gene;gene=lrpA;gene_biotype=protein_coding;locus_tag=AL55_RS22255;old_locus_tag=AL55_03424 NZ_KK316828.1 Protein Homology CDS 3666216 3666668 . - 0 ID=cds-WP_003417179.1;Parent=gene-AL55_RS22255;Dbxref=GenBank:WP_003417179.1;Name=WP_003417179.1;gbkey=CDS;gene=lrpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217808.1;locus_tag=AL55_RS22255;product=transcriptional regulator LrpA;protein_id=WP_003417179.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3666699 3667946 . + . ID=gene-AL55_RS22260;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;locus_tag=AL55_RS22260;old_locus_tag=AL55_03425 NZ_KK316828.1 Protein Homology CDS 3666699 3667946 . + 0 ID=cds-WP_003417184.1;Parent=gene-AL55_RS22260;Dbxref=GenBank:WP_003417184.1;Name=WP_003417184.1;gbkey=CDS;gene=hglS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978791.1;locus_tag=AL55_RS22260;product=2-oxoadipate dioxygenase/decarboxylase;protein_id=WP_003417184.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3667946 3669457 . + . ID=gene-AL55_RS22265;Name=amaB;gbkey=Gene;gene=amaB;gene_biotype=protein_coding;gene_synonym=amaA;locus_tag=AL55_RS22265;old_locus_tag=AL55_03426 NZ_KK316828.1 Protein Homology CDS 3667946 3669457 . + 0 ID=cds-WP_031647624.1;Parent=gene-AL55_RS22265;Dbxref=GenBank:WP_031647624.1;Name=WP_031647624.1;gbkey=CDS;gene=amaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014383207.1;locus_tag=AL55_RS22265;product=L-piperidine-6-carboxylate dehydrogenase;protein_id=WP_031647624.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3669557 3670306 . - . ID=gene-AL55_RS22270;Name=AL55_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22270;old_locus_tag=AL55_03427 NZ_KK316828.1 Protein Homology CDS 3669557 3670306 . - 0 ID=cds-WP_003900005.1;Parent=gene-AL55_RS22270;Dbxref=GenBank:WP_003900005.1;Name=WP_003900005.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF025019.6;locus_tag=AL55_RS22270;product=ATP-binding protein;protein_id=WP_003900005.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3670437 3671102 . + . ID=gene-AL55_RS22275;Name=AL55_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22275;old_locus_tag=AL55_03428 NZ_KK316828.1 Protein Homology CDS 3670437 3671102 . + 0 ID=cds-WP_003417200.1;Parent=gene-AL55_RS22275;Dbxref=GenBank:WP_003417200.1;Name=WP_003417200.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217812.1;locus_tag=AL55_RS22275;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003417200.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3671146 3675687 . + . ID=gene-AL55_RS22280;Name=lhr;gbkey=Gene;gene=lhr;gene_biotype=protein_coding;locus_tag=AL55_RS22280;old_locus_tag=AL55_03429 NZ_KK316828.1 Protein Homology CDS 3671146 3675687 . + 0 ID=cds-WP_003901592.1;Parent=gene-AL55_RS22280;Dbxref=GenBank:WP_003901592.1;Name=WP_003901592.1;Ontology_term=GO:0003676,GO:0005524,GO:0016818;gbkey=CDS;gene=lhr;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217813.1;locus_tag=AL55_RS22280;product=ATP-dependent helicase;protein_id=WP_003901592.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3675691 3676458 . + . ID=gene-AL55_RS22285;Name=nei2;gbkey=Gene;gene=nei2;gene_biotype=protein_coding;locus_tag=AL55_RS22285;old_locus_tag=AL55_03430 NZ_KK316828.1 Protein Homology CDS 3675691 3676458 . + 0 ID=cds-WP_003900006.1;Parent=gene-AL55_RS22285;Dbxref=GenBank:WP_003900006.1;Name=WP_003900006.1;Ontology_term=GO:0006284,GO:0019104,GO:0140078;gbkey=CDS;gene=nei2;go_function=DNA N-glycosylase activity|0019104||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217814.1;locus_tag=AL55_RS22285;product=endonuclease VIII Nei2;protein_id=WP_003900006.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3676481 3677395 . - . ID=gene-AL55_RS22290;Name=lpqC;gbkey=Gene;gene=lpqC;gene_biotype=protein_coding;locus_tag=AL55_RS22290;old_locus_tag=AL55_03431 NZ_KK316828.1 Protein Homology CDS 3676481 3677395 . - 0 ID=cds-WP_003417210.1;Parent=gene-AL55_RS22290;Dbxref=GenBank:WP_003417210.1;Name=WP_003417210.1;Ontology_term=GO:0050526;gbkey=CDS;gene=lpqC;go_function=poly(3-hydroxybutyrate) depolymerase activity|0050526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217815.1;locus_tag=AL55_RS22290;product=extracellular catalytic domain type 1 short-chain-length polyhydroxyalkanoate depolymerase;protein_id=WP_003417210.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3677422 3680334 . - . ID=gene-AL55_RS22295;Name=atsB;gbkey=Gene;gene=atsB;gene_biotype=protein_coding;locus_tag=AL55_RS22295;old_locus_tag=AL55_03432 NZ_KK316828.1 Protein Homology CDS 3677422 3680334 . - 0 ID=cds-WP_003417213.1;Parent=gene-AL55_RS22295;Dbxref=GenBank:WP_003417213.1;Name=WP_003417213.1;gbkey=CDS;gene=atsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217816.1;locus_tag=AL55_RS22295;product=arylsulfatase AtsB;protein_id=WP_003417213.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3680354 3681271 . - . ID=gene-AL55_RS22300;Name=AL55_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22300;old_locus_tag=AL55_03433 NZ_KK316828.1 Protein Homology CDS 3680354 3681271 . - 0 ID=cds-WP_003417215.1;Parent=gene-AL55_RS22300;Dbxref=GenBank:WP_003417215.1;Name=WP_003417215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217817.1;locus_tag=AL55_RS22300;product=RluA family pseudouridine synthase;protein_id=WP_003417215.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3681283 3681948 . - . ID=gene-AL55_RS22305;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AL55_RS22305;old_locus_tag=AL55_03434 NZ_KK316828.1 Protein Homology CDS 3681283 3681948 . - 0 ID=cds-WP_003417216.1;Parent=gene-AL55_RS22305;Dbxref=GenBank:WP_003417216.1;Name=WP_003417216.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217818.1;locus_tag=AL55_RS22305;product=phosphate signaling complex protein PhoU;protein_id=WP_003417216.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3682056 3683813 . - . ID=gene-AL55_RS22310;Name=AL55_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22310;old_locus_tag=AL55_03435 NZ_KK316828.1 Protein Homology CDS 3682056 3683813 . - 0 ID=cds-WP_003417217.1;Parent=gene-AL55_RS22310;Dbxref=GenBank:WP_003417217.1;Name=WP_003417217.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217819.1;locus_tag=AL55_RS22310;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_003417217.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3683828 3685309 . - . ID=gene-AL55_RS22315;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=pseudogene;locus_tag=AL55_RS22315;old_locus_tag=AL55_03436;pseudo=true NZ_KK316828.1 Protein Homology CDS 3683828 3685309 . - 0 ID=cds-AL55_RS22315;Parent=gene-AL55_RS22315;Note=internal stop;Ontology_term=GO:0045454,GO:0016491,GO:0050660;gbkey=CDS;gene=lpdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217820.1;locus_tag=AL55_RS22315;product=NAD(P)H-quinone dehydrogenase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3685512 3685991 . + . ID=gene-AL55_RS22320;Name=AL55_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22320;old_locus_tag=AL55_03437 NZ_KK316828.1 Protein Homology CDS 3685512 3685991 . + 0 ID=cds-WP_003417219.1;Parent=gene-AL55_RS22320;Dbxref=GenBank:WP_003417219.1;Name=WP_003417219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217821.1;locus_tag=AL55_RS22320;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_003417219.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3686010 3687179 . - . ID=gene-AL55_RS22325;Name=AL55_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22325;old_locus_tag=AL55_03438 NZ_KK316828.1 Protein Homology CDS 3686010 3687179 . - 0 ID=cds-WP_003417220.1;Parent=gene-AL55_RS22325;Dbxref=GenBank:WP_003417220.1;Name=WP_003417220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177955.1;locus_tag=AL55_RS22325;product=M20 family metallopeptidase;protein_id=WP_003417220.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3687176 3688360 . - . ID=gene-AL55_RS22330;Name=AL55_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22330;old_locus_tag=AL55_03439 NZ_KK316828.1 Protein Homology CDS 3687176 3688360 . - 0 ID=cds-WP_003900009.1;Parent=gene-AL55_RS22330;Dbxref=GenBank:WP_003900009.1;Name=WP_003900009.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177956.1;locus_tag=AL55_RS22330;product=M20 family metallopeptidase;protein_id=WP_003900009.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3688425 3689231 . + . ID=gene-AL55_RS22335;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AL55_RS22335;old_locus_tag=AL55_03440 NZ_KK316828.1 Protein Homology CDS 3688425 3689231 . + 0 ID=cds-WP_003417233.1;Parent=gene-AL55_RS22335;Dbxref=GenBank:WP_003417233.1;Name=WP_003417233.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217824.1;locus_tag=AL55_RS22335;product=purine-nucleoside phosphorylase;protein_id=WP_003417233.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3689235 3690839 . + . ID=gene-AL55_RS22340;Name=pmmB;gbkey=Gene;gene=pmmB;gene_biotype=protein_coding;locus_tag=AL55_RS22340;old_locus_tag=AL55_03441 NZ_KK316828.1 Protein Homology CDS 3689235 3690839 . + 0 ID=cds-WP_003900011.1;Parent=gene-AL55_RS22340;Dbxref=GenBank:WP_003900011.1;Name=WP_003900011.1;Ontology_term=GO:0016868;gbkey=CDS;gene=pmmB;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217825.1;locus_tag=AL55_RS22340;product=phospho-sugar mutase;protein_id=WP_003900011.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3690841 3691464 . - . ID=gene-AL55_RS22345;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AL55_RS22345;old_locus_tag=AL55_03442 NZ_KK316828.1 Protein Homology CDS 3690841 3691464 . - 0 ID=cds-WP_003417245.1;Parent=gene-AL55_RS22345;Dbxref=GenBank:WP_003417245.1;Name=WP_003417245.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217826.1;locus_tag=AL55_RS22345;product=uracil phosphoribosyltransferase;protein_id=WP_003417245.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3691569 3692468 . + . ID=gene-AL55_RS22350;Name=sapM;gbkey=Gene;gene=sapM;gene_biotype=protein_coding;locus_tag=AL55_RS22350;old_locus_tag=AL55_03443 NZ_KK316828.1 Protein Homology CDS 3691569 3692468 . + 0 ID=cds-WP_003900013.1;Parent=gene-AL55_RS22350;Dbxref=GenBank:WP_003900013.1;Name=WP_003900013.1;gbkey=CDS;gene=sapM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217827.1;locus_tag=AL55_RS22350;product=phosphatidylinositol-3-phosphatase SapM;protein_id=WP_003900013.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3692492 3693754 . + . ID=gene-AL55_RS22355;Name=satS;gbkey=Gene;gene=satS;gene_biotype=protein_coding;locus_tag=AL55_RS22355;old_locus_tag=AL55_03444 NZ_KK316828.1 Protein Homology CDS 3692492 3693754 . + 0 ID=cds-WP_003417251.1;Parent=gene-AL55_RS22355;Dbxref=GenBank:WP_003417251.1;Name=WP_003417251.1;gbkey=CDS;gene=satS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217828.1;locus_tag=AL55_RS22355;product=protein export chaperone SatS;protein_id=WP_003417251.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3693775 3694701 . - . ID=gene-AL55_RS22360;Name=AL55_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22360;old_locus_tag=AL55_03445 NZ_KK316828.1 Protein Homology CDS 3693775 3694701 . - 0 ID=cds-WP_003417254.1;Parent=gene-AL55_RS22360;Dbxref=GenBank:WP_003417254.1;Name=WP_003417254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217829.1;locus_tag=AL55_RS22360;product=alpha/beta fold hydrolase;protein_id=WP_003417254.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3694727 3694897 . - . ID=gene-AL55_RS26530;Name=AL55_RS26530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26530 NZ_KK316828.1 Protein Homology CDS 3694727 3694897 . - 0 ID=cds-WP_003900015.1;Parent=gene-AL55_RS26530;Dbxref=GenBank:WP_003900015.1;Name=WP_003900015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030045.1;locus_tag=AL55_RS26530;product=hypothetical protein;protein_id=WP_003900015.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3695076 3695387 . - . ID=gene-AL55_RS22365;Name=mtp;gbkey=Gene;gene=mtp;gene_biotype=protein_coding;locus_tag=AL55_RS22365;old_locus_tag=AL55_03446 NZ_KK316828.1 Protein Homology CDS 3695076 3695387 . - 0 ID=cds-WP_003417257.1;Parent=gene-AL55_RS22365;Dbxref=GenBank:WP_003417257.1;Name=WP_003417257.1;gbkey=CDS;gene=mtp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177957.1;locus_tag=AL55_RS22365;product=pilin structural subunit Mtp;protein_id=WP_003417257.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3695458 3696555 . - . ID=gene-AL55_RS22370;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=AL55_RS22370;old_locus_tag=AL55_03447 NZ_KK316828.1 Protein Homology CDS 3695458 3696555 . - 0 ID=cds-WP_003417259.1;Parent=gene-AL55_RS22370;Dbxref=GenBank:WP_003417259.1;Name=WP_003417259.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217830.1;locus_tag=AL55_RS22370;product=adenosine deaminase;protein_id=WP_003417259.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3696555 3697838 . - . ID=gene-AL55_RS22375;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=AL55_RS22375;old_locus_tag=AL55_03448 NZ_KK316828.1 Protein Homology CDS 3696555 3697838 . - 0 ID=cds-WP_003900016.1;Parent=gene-AL55_RS22375;Dbxref=GenBank:WP_003900016.1;Name=WP_003900016.1;Ontology_term=GO:0006206;gbkey=CDS;gene=deoA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217831.1;locus_tag=AL55_RS22375;product=thymidine phosphorylase;protein_id=WP_003900016.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3697835 3698236 . - . ID=gene-AL55_RS22380;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=AL55_RS22380;old_locus_tag=AL55_03449 NZ_KK316828.1 Protein Homology CDS 3697835 3698236 . - 0 ID=cds-WP_003417264.1;Parent=gene-AL55_RS22380;Dbxref=GenBank:WP_003417264.1;Name=WP_003417264.1;Ontology_term=GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217832.1;locus_tag=AL55_RS22380;product=cytidine deaminase;protein_id=WP_003417264.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3698473 3698811 . + . ID=gene-AL55_RS22385;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=AL55_RS22385;old_locus_tag=AL55_03450 NZ_KK316828.1 Protein Homology CDS 3698473 3698811 . + 0 ID=cds-WP_003417267.1;Parent=gene-AL55_RS22385;Dbxref=GenBank:WP_003417267.1;Name=WP_003417267.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0045273;gbkey=CDS;gene=sdhC;go_component=respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217833.1;locus_tag=AL55_RS22385;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_003417267.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3698808 3699242 . + . ID=gene-AL55_RS22390;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=AL55_RS22390;old_locus_tag=AL55_03451 NZ_KK316828.1 Protein Homology CDS 3698808 3699242 . + 0 ID=cds-WP_003902441.1;Parent=gene-AL55_RS22390;Dbxref=GenBank:WP_003902441.1;Name=WP_003902441.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217834.1;locus_tag=AL55_RS22390;product=succinate dehydrogenase hydrophobic membrane anchor subunit;protein_id=WP_003902441.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3699371 3701143 . + . ID=gene-AL55_RS22395;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AL55_RS22395;old_locus_tag=AL55_03452 NZ_KK316828.1 Protein Homology CDS 3699371 3701143 . + 0 ID=cds-WP_003417273.1;Parent=gene-AL55_RS22395;Dbxref=GenBank:WP_003417273.1;Name=WP_003417273.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217835.1;locus_tag=AL55_RS22395;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_003417273.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3701143 3701934 . + . ID=gene-AL55_RS22400;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=AL55_RS22400;old_locus_tag=AL55_03453 NZ_KK316828.1 Protein Homology CDS 3701143 3701934 . + 0 ID=cds-WP_003417279.1;Parent=gene-AL55_RS22400;Dbxref=GenBank:WP_003417279.1;Name=WP_003417279.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;gene=sdhB;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217836.1;locus_tag=AL55_RS22400;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_003417279.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3702013 3702441 . - . ID=gene-AL55_RS22405;Name=AL55_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22405;old_locus_tag=AL55_03454 NZ_KK316828.1 Protein Homology CDS 3702013 3702441 . - 0 ID=cds-WP_003417282.1;Parent=gene-AL55_RS22405;Dbxref=GenBank:WP_003417282.1;Name=WP_003417282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217837.1;locus_tag=AL55_RS22405;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003417282.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3702445 3702687 . - . ID=gene-AL55_RS22410;Name=AL55_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22410;old_locus_tag=AL55_03455 NZ_KK316828.1 Protein Homology CDS 3702445 3702687 . - 0 ID=cds-WP_003417286.1;Parent=gene-AL55_RS22410;Dbxref=GenBank:WP_003417286.1;Name=WP_003417286.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217838.1;locus_tag=AL55_RS22410;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003417286.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3702809 3703423 . - . ID=gene-AL55_RS22415;Name=AL55_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22415;old_locus_tag=AL55_03456 NZ_KK316828.1 Protein Homology CDS 3702809 3703423 . - 0 ID=cds-WP_003417288.1;Parent=gene-AL55_RS22415;Dbxref=GenBank:WP_003417288.1;Name=WP_003417288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177958.1;locus_tag=AL55_RS22415;product=methyltransferase domain-containing protein;protein_id=WP_003417288.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3703420 3704085 . - . ID=gene-AL55_RS22420;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AL55_RS22420;old_locus_tag=AL55_03457 NZ_KK316828.1 Protein Homology CDS 3703420 3704085 . - 0 ID=cds-WP_003417290.1;Parent=gene-AL55_RS22420;Dbxref=GenBank:WP_003417290.1;Name=WP_003417290.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177959.1;locus_tag=AL55_RS22420;product=molybdopterin converting factor subunit 1;protein_id=WP_003417290.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3704086 3704619 . - . ID=gene-AL55_RS22425;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AL55_RS22425;old_locus_tag=AL55_03458 NZ_KK316828.1 Protein Homology CDS 3704086 3704619 . - 0 ID=cds-WP_003417293.1;Parent=gene-AL55_RS22425;Dbxref=GenBank:WP_003417293.1;Name=WP_003417293.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217841.3;locus_tag=AL55_RS22425;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_003417293.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3704616 3704990 . - . ID=gene-AL55_RS22430;Name=AL55_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22430;old_locus_tag=AL55_03459 NZ_KK316828.1 Protein Homology CDS 3704616 3704990 . - 0 ID=cds-WP_003417295.1;Parent=gene-AL55_RS22430;Dbxref=GenBank:WP_003417295.1;Name=WP_003417295.1;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003417295.1;locus_tag=AL55_RS22430;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_003417295.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3705087 3706223 . - . ID=gene-AL55_RS22435;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AL55_RS22435;old_locus_tag=AL55_03460 NZ_KK316828.1 Protein Homology CDS 3705087 3706223 . - 0 ID=cds-WP_003417297.1;Parent=gene-AL55_RS22435;Dbxref=GenBank:WP_003417297.1;Name=WP_003417297.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003417297.1;locus_tag=AL55_RS22435;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_003417297.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3706796 3707941 . + . ID=gene-AL55_RS22440;Name=AL55_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22440;old_locus_tag=AL55_03461 NZ_KK316828.1 Protein Homology CDS 3706796 3707941 . + 0 ID=cds-WP_003417299.1;Parent=gene-AL55_RS22440;Dbxref=GenBank:WP_003417299.1;Name=WP_003417299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291369.1;locus_tag=AL55_RS22440;product=BTAD domain-containing putative transcriptional regulator;protein_id=WP_003417299.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3708036 3708332 . - . ID=gene-AL55_RS22445;Name=AL55_RS22445;end_range=3708332,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS22445;old_locus_tag=AL55_03462;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 3708036 3708332 . - 0 ID=cds-AL55_RS22445;Parent=gene-AL55_RS22445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3708332,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900020.1;locus_tag=AL55_RS22445;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3708367 3709373 . - . ID=gene-AL55_RS22450;Name=AL55_RS22450;end_range=3709373,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22450;old_locus_tag=AL55_03463;partial=true NZ_KK316828.1 Protein Homology CDS 3708367 3709373 . - 2 ID=cds-WP_078448443.1;Parent=gene-AL55_RS22450;Dbxref=GenBank:WP_078448443.1;Name=WP_078448443.1;Ontology_term=GO:0006313,GO:0004803;end_range=3709373,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS22450;partial=true;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_078448443.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3709474 3709771 . - . ID=gene-AL55_RS22455;Name=AL55_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22455;old_locus_tag=AL55_03464;partial=true;start_range=.,3709474 NZ_KK316828.1 Protein Homology CDS 3709474 3709771 . - 0 ID=cds-WP_031655338.1;Parent=gene-AL55_RS22455;Dbxref=GenBank:WP_031655338.1;Name=WP_031655338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_284181008.1;locus_tag=AL55_RS22455;partial=true;product=IS3 family transposase;protein_id=WP_031655338.1;start_range=.,3709474;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3710065 3711777 . + . ID=gene-AL55_RS22460;Name=AL55_RS22460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS22460;old_locus_tag=AL55_03465;pseudo=true NZ_KK316828.1 Protein Homology CDS 3710065 3711777 . + 0 ID=cds-AL55_RS22460;Parent=gene-AL55_RS22460;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217844.1;locus_tag=AL55_RS22460;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_KK316828.1 RefSeq gene 3711710 3712648 . - . ID=gene-AL55_RS22465;Name=sigJ;gbkey=Gene;gene=sigJ;gene_biotype=protein_coding;locus_tag=AL55_RS22465;old_locus_tag=AL55_03466 NZ_KK316828.1 Protein Homology CDS 3711710 3712648 . - 0 ID=cds-WP_003417413.1;Parent=gene-AL55_RS22465;Dbxref=GenBank:WP_003417413.1;Name=WP_003417413.1;gbkey=CDS;gene=sigJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217845.1;locus_tag=AL55_RS22465;product=sigma-70 family RNA polymerase sigma factor SigJ;protein_id=WP_003417413.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3712657 3714024 . + . ID=gene-AL55_RS22470;Name=AL55_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22470;old_locus_tag=AL55_03467 NZ_KK316828.1 Protein Homology CDS 3712657 3714024 . + 0 ID=cds-WP_003902446.1;Parent=gene-AL55_RS22470;Dbxref=GenBank:WP_003902446.1;Name=WP_003902446.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006329602.1;locus_tag=AL55_RS22470;product=aspartate aminotransferase family protein;protein_id=WP_003902446.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3714093 3715310 . + . ID=gene-AL55_RS22475;Name=dacB1;gbkey=Gene;gene=dacB1;gene_biotype=protein_coding;locus_tag=AL55_RS22475;old_locus_tag=AL55_03468 NZ_KK316828.1 Protein Homology CDS 3714093 3715310 . + 0 ID=cds-WP_003417415.1;Parent=gene-AL55_RS22475;Dbxref=GenBank:WP_003417415.1;Name=WP_003417415.1;gbkey=CDS;gene=dacB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217847.1;locus_tag=AL55_RS22475;product=D-alanyl-D-alanine carboxypeptidase DacB1;protein_id=WP_003417415.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3715535 3716914 . + . ID=gene-AL55_RS22480;Name=sugI;gbkey=Gene;gene=sugI;gene_biotype=protein_coding;locus_tag=AL55_RS22480;old_locus_tag=AL55_03469 NZ_KK316828.1 Protein Homology CDS 3715535 3716914 . + 0 ID=cds-WP_003912183.1;Parent=gene-AL55_RS22480;Dbxref=GenBank:WP_003912183.1;Name=WP_003912183.1;Ontology_term=GO:0008643,GO:0051119,GO:0016020;gbkey=CDS;gene=sugI;go_component=membrane|0016020||IEA;go_function=sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912183.1;locus_tag=AL55_RS22480;product=sugar porter family MFS transporter;protein_id=WP_003912183.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3716911 3718062 . + . ID=gene-AL55_RS22485;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AL55_RS22485;old_locus_tag=AL55_03470 NZ_KK316828.1 Protein Homology CDS 3716911 3718062 . + 0 ID=cds-WP_003417418.1;Parent=gene-AL55_RS22485;Dbxref=GenBank:WP_003417418.1;Name=WP_003417418.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217849.1;locus_tag=AL55_RS22485;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_003417418.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3718253 3719098 . - . ID=gene-AL55_RS22490;Name=prp1;gbkey=Gene;gene=prp1;gene_biotype=protein_coding;locus_tag=AL55_RS22490;old_locus_tag=AL55_03471 NZ_KK316828.1 Protein Homology CDS 3718253 3719098 . - 0 ID=cds-WP_003417421.1;Parent=gene-AL55_RS22490;Dbxref=GenBank:WP_003417421.1;Name=WP_003417421.1;gbkey=CDS;gene=prp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217850.1;locus_tag=AL55_RS22490;product=PDZ-interacting protease regulator Ppr1;protein_id=WP_003417421.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3719573 3720013 . + . ID=gene-AL55_RS22495;Name=AL55_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22495;old_locus_tag=AL55_03472 NZ_KK316828.1 Protein Homology CDS 3719573 3720013 . + 0 ID=cds-WP_003900026.1;Parent=gene-AL55_RS22495;Dbxref=GenBank:WP_003900026.1;Name=WP_003900026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217851.1;locus_tag=AL55_RS22495;product=hypoxia response transcriptional regulator;protein_id=WP_003900026.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3720047 3720916 . - . ID=gene-AL55_RS22500;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=AL55_RS22500;old_locus_tag=AL55_03473 NZ_KK316828.1 Protein Homology CDS 3720047 3720916 . - 0 ID=cds-WP_003417435.1;Parent=gene-AL55_RS22500;Dbxref=GenBank:WP_003417435.1;Name=WP_003417435.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217852.1;locus_tag=AL55_RS22500;product=inner membrane protein YhjD;protein_id=WP_003417435.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3720937 3721947 . - . ID=gene-AL55_RS22505;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AL55_RS22505;old_locus_tag=AL55_03474 NZ_KK316828.1 Protein Homology CDS 3720937 3721947 . - 0 ID=cds-WP_003417440.1;Parent=gene-AL55_RS22505;Dbxref=GenBank:WP_003417440.1;Name=WP_003417440.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217853.1;locus_tag=AL55_RS22505;product=tryptophan--tRNA ligase;protein_id=WP_003417440.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3722115 3722864 . + . ID=gene-AL55_RS22510;Name=AL55_RS22510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS22510;old_locus_tag=AL55_03476;partial=true;pseudo=true;start_range=.,3722115 NZ_KK316828.1 Protein Homology CDS 3722115 3722864 . + 0 ID=cds-AL55_RS22510;Parent=gene-AL55_RS22510;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900674.1;locus_tag=AL55_RS22510;partial=true;product=alpha/beta fold hydrolase;pseudo=true;start_range=.,3722115;transl_table=11 NZ_KK316828.1 RefSeq gene 3722931 3724160 . - . ID=gene-AL55_RS22515;Name=AL55_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22515;old_locus_tag=AL55_03477 NZ_KK316828.1 Protein Homology CDS 3722931 3724160 . - 0 ID=cds-WP_003417452.1;Parent=gene-AL55_RS22515;Dbxref=GenBank:WP_003417452.1;Name=WP_003417452.1;Ontology_term=GO:0006102,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=isocitrate metabolic process|0006102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217856.1;locus_tag=AL55_RS22515;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_003417452.1;transl_table=11 NZ_KK316828.1 cmsearch riboswitch 3724287 3724406 . + . ID=id-NZ_KK316828.1:3724287..3724406;Dbxref=RFAM:RF00634;Note=SAM riboswitch class IV;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316828.1 RefSeq gene 3724443 3725792 . + . ID=gene-AL55_RS22520;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AL55_RS22520;old_locus_tag=AL55_03478 NZ_KK316828.1 Protein Homology CDS 3724443 3725792 . + 0 ID=cds-WP_003900028.1;Parent=gene-AL55_RS22520;Dbxref=GenBank:WP_003900028.1;Name=WP_003900028.1;Ontology_term=GO:0019346,GO:0016765;gbkey=CDS;gene=metC;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217857.1;locus_tag=AL55_RS22520;product=bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase;protein_id=WP_003900028.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3725804 3726943 . + . ID=gene-AL55_RS22525;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=AL55_RS22525;old_locus_tag=AL55_03479 NZ_KK316828.1 Protein Homology CDS 3725804 3726943 . + 0 ID=cds-WP_003417458.1;Parent=gene-AL55_RS22525;Dbxref=GenBank:WP_003417458.1;Name=WP_003417458.1;Ontology_term=GO:0009086,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217858.1;locus_tag=AL55_RS22525;product=homoserine O-acetyltransferase MetX;protein_id=WP_003417458.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3726940 3727671 . + . ID=gene-AL55_RS22530;Name=AL55_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22530;old_locus_tag=AL55_03480 NZ_KK316828.1 Protein Homology CDS 3726940 3727671 . + 0 ID=cds-WP_003417461.1;Parent=gene-AL55_RS22530;Dbxref=GenBank:WP_003417461.1;Name=WP_003417461.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217859.1;locus_tag=AL55_RS22530;product=class I SAM-dependent methyltransferase;protein_id=WP_003417461.1;transl_table=11 NZ_KK316828.1 RefSeq gene 3727680 3734194 . - . ID=gene-AL55_RS0105540;Name=AL55_RS0105540;end_range=3734194,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105540;old_locus_tag=AL55_03481;partial=true NZ_KK316828.1 Protein Homology CDS 3727680 3734194 . - 2 ID=cds-WP_031721887.1;Parent=gene-AL55_RS0105540;Dbxref=GenBank:WP_031721887.1;Name=WP_031721887.1;end_range=3734194,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585563.1;locus_tag=AL55_RS0105540;partial=true;product=PPE family protein;protein_id=WP_031721887.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3735809 3737419 . - . ID=gene-AL55_RS0105545;Name=AL55_RS0105545;end_range=3737419,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0105545;partial=true;pseudo=true;start_range=.,3735809 NZ_KK316828.1 Protein Homology CDS 3735809 3737419 . - 0 ID=cds-AL55_RS0105545;Parent=gene-AL55_RS0105545;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=3737419,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177960.1;locus_tag=AL55_RS0105545;partial=true;product=PPE family protein;pseudo=true;start_range=.,3735809;transl_table=11 NZ_KK316828.1 RefSeq gene 3740649 3741404 . - . ID=gene-AL55_RS0105550;Name=AL55_RS0105550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105550;partial=true;start_range=.,3740649 NZ_KK316828.1 Protein Homology CDS 3740649 3741404 . - 0 ID=cds-WP_141767241.1;Parent=gene-AL55_RS0105550;Dbxref=GenBank:WP_141767241.1;Name=WP_141767241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177960.1;locus_tag=AL55_RS0105550;partial=true;product=PPE family protein;protein_id=WP_141767241.1;start_range=.,3740649;transl_table=11 NZ_KK316828.1 RefSeq gene 3741453 3742433 . - . ID=gene-AL55_RS27815;Name=AL55_RS27815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27815 NZ_KK316828.1 GeneMarkS-2+ CDS 3741453 3742433 . - 0 ID=cds-WP_031654342.1;Parent=gene-AL55_RS27815;Dbxref=GenBank:WP_031654342.1;Name=WP_031654342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS27815;product=hypothetical protein;protein_id=WP_031654342.1;transl_table=11 NZ_KK316828.1 RefSeq pseudogene 3742591 3745328 . - . ID=gene-AL55_RS22540;Name=AL55_RS22540;end_range=3745328,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS22540;old_locus_tag=AL55_03482;partial=true;pseudo=true NZ_KK316828.1 Protein Homology CDS 3742591 3745328 . - 0 ID=cds-AL55_RS22540;Parent=gene-AL55_RS22540;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3745328,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177962.1;locus_tag=AL55_RS22540;partial=true;product=PE family protein;pseudo=true;transl_table=11 ##sequence-region NZ_KK316829.1 1 468685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448434 NZ_KK316829.1 RefSeq region 1 468685 . + . ID=NZ_KK316829.1:1..468685;Dbxref=taxon:1448434;collection-date=2013-04-16;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0100 NZ_KK316829.1 RefSeq gene 1 3169 . + . ID=gene-AL55_RS27945;Name=AL55_RS27945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27945;old_locus_tag=AL55_03483;partial=true;start_range=.,1 NZ_KK316829.1 Protein Homology CDS 1 3169 . + 1 ID=cds-WP_031721891.1;Parent=gene-AL55_RS27945;Dbxref=GenBank:WP_031721891.1;Name=WP_031721891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330448.1;locus_tag=AL55_RS27945;partial=true;product=hypothetical protein;protein_id=WP_031721891.1;start_range=.,1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 3298 3804 . - . ID=gene-AL55_RS22555;Name=AL55_RS22555;end_range=3804,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS22555;old_locus_tag=AL55_03484;partial=true;pseudo=true NZ_KK316829.1 Protein Homology CDS 3298 3804 . - 0 ID=cds-AL55_RS22555;Parent=gene-AL55_RS22555;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3804,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294467.1;locus_tag=AL55_RS22555;partial=true;product=AMP-binding enzyme;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq gene 4000 6024 . + . ID=gene-AL55_RS22560;Name=AL55_RS22560;end_range=6024,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22560;old_locus_tag=AL55_03485;partial=true NZ_KK316829.1 Protein Homology CDS 4000 6024 . + 0 ID=cds-WP_078449334.1;Parent=gene-AL55_RS22560;Dbxref=GenBank:WP_078449334.1;Name=WP_078449334.1;Ontology_term=GO:0005576,GO:0009986;end_range=6024,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177982.1;locus_tag=AL55_RS22560;partial=true;product=PE family protein;protein_id=WP_078449334.1;transl_table=11 NZ_KK316829.1 RefSeq gene 6125 6970 . + . ID=gene-AL55_RS27825;Name=AL55_RS27825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27825;partial=true;start_range=.,6125 NZ_KK316829.1 Protein Homology CDS 6125 6970 . + 0 ID=cds-WP_181906851.1;Parent=gene-AL55_RS27825;Dbxref=GenBank:WP_181906851.1;Name=WP_181906851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177982.1;locus_tag=AL55_RS27825;partial=true;product=hypothetical protein;protein_id=WP_181906851.1;start_range=.,6125;transl_table=11 NZ_KK316829.1 RefSeq gene 7531 9177 . - . ID=gene-AL55_RS22565;Name=AL55_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22565;old_locus_tag=AL55_03486 NZ_KK316829.1 Protein Homology CDS 7531 9177 . - 0 ID=cds-WP_003911024.1;Parent=gene-AL55_RS22565;Dbxref=GenBank:WP_003911024.1;Name=WP_003911024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177983.1;locus_tag=AL55_RS22565;product=acyl-CoA synthetase;protein_id=WP_003911024.1;transl_table=11 NZ_KK316829.1 RefSeq gene 9251 10042 . + . ID=gene-AL55_RS22570;Name=AL55_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22570;old_locus_tag=AL55_03487 NZ_KK316829.1 Protein Homology CDS 9251 10042 . + 0 ID=cds-WP_003419179.1;Parent=gene-AL55_RS22570;Dbxref=GenBank:WP_003419179.1;Name=WP_003419179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218033.1;locus_tag=AL55_RS22570;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003419179.1;transl_table=11 NZ_KK316829.1 RefSeq gene 10138 10977 . + . ID=gene-AL55_RS22575;Name=AL55_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22575;old_locus_tag=AL55_03488 NZ_KK316829.1 Protein Homology CDS 10138 10977 . + 0 ID=cds-WP_003419184.1;Parent=gene-AL55_RS22575;Dbxref=GenBank:WP_003419184.1;Name=WP_003419184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218034.1;locus_tag=AL55_RS22575;product=hypothetical protein;protein_id=WP_003419184.1;transl_table=11 NZ_KK316829.1 RefSeq gene 11032 12228 . - . ID=gene-AL55_RS22580;Name=cyp142;gbkey=Gene;gene=cyp142;gene_biotype=protein_coding;locus_tag=AL55_RS22580;old_locus_tag=AL55_03489 NZ_KK316829.1 Protein Homology CDS 11032 12228 . - 0 ID=cds-WP_003900082.1;Parent=gene-AL55_RS22580;Dbxref=GenBank:WP_003900082.1;Name=WP_003900082.1;gbkey=CDS;gene=cyp142;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218035.1;locus_tag=AL55_RS22580;product=steroid C26-monooxygenase Cyp142;protein_id=WP_003900082.1;transl_table=11 NZ_KK316829.1 RefSeq gene 12257 12967 . + . ID=gene-AL55_RS22585;Name=AL55_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22585;old_locus_tag=AL55_03490 NZ_KK316829.1 Protein Homology CDS 12257 12967 . + 0 ID=cds-WP_003419190.1;Parent=gene-AL55_RS22585;Dbxref=GenBank:WP_003419190.1;Name=WP_003419190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218036.1;locus_tag=AL55_RS22585;product=acetoacetate decarboxylase family protein;protein_id=WP_003419190.1;transl_table=11 NZ_KK316829.1 RefSeq gene 13032 14063 . - . ID=gene-AL55_RS22590;Name=AL55_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22590;old_locus_tag=AL55_03491 NZ_KK316829.1 Protein Homology CDS 13032 14063 . - 0 ID=cds-WP_003419192.1;Parent=gene-AL55_RS22590;Dbxref=GenBank:WP_003419192.1;Name=WP_003419192.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015628990.1;locus_tag=AL55_RS22590;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003419192.1;transl_table=11 NZ_KK316829.1 RefSeq gene 14135 15139 . + . ID=gene-AL55_RS22595;Name=AL55_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22595;old_locus_tag=AL55_03492 NZ_KK316829.1 Protein Homology CDS 14135 15139 . + 0 ID=cds-WP_003900085.1;Parent=gene-AL55_RS22595;Dbxref=GenBank:WP_003900085.1;Name=WP_003900085.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487624.1;locus_tag=AL55_RS22595;product=Zn-ribbon domain-containing OB-fold protein;protein_id=WP_003900085.1;transl_table=11 NZ_KK316829.1 RefSeq gene 15155 16219 . + . ID=gene-AL55_RS22600;Name=AL55_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22600;old_locus_tag=AL55_03493 NZ_KK316829.1 Protein Homology CDS 15155 16219 . + 0 ID=cds-WP_031695462.1;Parent=gene-AL55_RS22600;Dbxref=GenBank:WP_031695462.1;Name=WP_031695462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218039.1;locus_tag=AL55_RS22600;product=thiolase domain-containing protein;protein_id=WP_031695462.1;transl_table=11 NZ_KK316829.1 RefSeq gene 16236 17420 . + . ID=gene-AL55_RS22605;Name=AL55_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22605;old_locus_tag=AL55_03494 NZ_KK316829.1 Protein Homology CDS 16236 17420 . + 0 ID=cds-WP_003906140.1;Parent=gene-AL55_RS22605;Dbxref=GenBank:WP_003906140.1;Name=WP_003906140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218040.1;locus_tag=AL55_RS22605;product=thiolase domain-containing protein;protein_id=WP_003906140.1;transl_table=11 NZ_KK316829.1 RefSeq gene 17462 18493 . + . ID=gene-AL55_RS22610;Name=AL55_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22610;old_locus_tag=AL55_03495 NZ_KK316829.1 Protein Homology CDS 17462 18493 . + 0 ID=cds-WP_003419207.1;Parent=gene-AL55_RS22610;Dbxref=GenBank:WP_003419207.1;Name=WP_003419207.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218041.1;locus_tag=AL55_RS22610;product=NHL repeat-containing protein;protein_id=WP_003419207.1;transl_table=11 NZ_KK316829.1 RefSeq gene 18507 19031 . - . ID=gene-AL55_RS22615;Name=AL55_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22615;old_locus_tag=AL55_03496 NZ_KK316829.1 Protein Homology CDS 18507 19031 . - 0 ID=cds-WP_003419208.1;Parent=gene-AL55_RS22615;Dbxref=GenBank:WP_003419208.1;Name=WP_003419208.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218042.1;locus_tag=AL55_RS22615;product=gamma carbonic anhydrase family protein;protein_id=WP_003419208.1;transl_table=11 NZ_KK316829.1 RefSeq gene 19146 20306 . + . ID=gene-AL55_RS22620;Name=kshA;gbkey=Gene;gene=kshA;gene_biotype=protein_coding;locus_tag=AL55_RS22620;old_locus_tag=AL55_03497 NZ_KK316829.1 Protein Homology CDS 19146 20306 . + 0 ID=cds-WP_003419211.1;Parent=gene-AL55_RS22620;Dbxref=GenBank:WP_003419211.1;Name=WP_003419211.1;gbkey=CDS;gene=kshA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218043.1;locus_tag=AL55_RS22620;product=3-ketosteroid-9-alpha-hydroxylase subunit KshA;protein_id=WP_003419211.1;transl_table=11 NZ_KK316829.1 RefSeq gene 20312 20761 . + . ID=gene-AL55_RS22625;Name=AL55_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22625;old_locus_tag=AL55_03498 NZ_KK316829.1 Protein Homology CDS 20312 20761 . + 0 ID=cds-WP_003419215.1;Parent=gene-AL55_RS22625;Dbxref=GenBank:WP_003419215.1;Name=WP_003419215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218044.1;locus_tag=AL55_RS22625;product=hypothetical protein;protein_id=WP_003419215.1;transl_table=11 NZ_KK316829.1 RefSeq gene 21186 21899 . - . ID=gene-AL55_RS22630;Name=AL55_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22630;old_locus_tag=AL55_03499 NZ_KK316829.1 Protein Homology CDS 21186 21899 . - 0 ID=cds-WP_003900086.1;Parent=gene-AL55_RS22630;Dbxref=GenBank:WP_003900086.1;Name=WP_003900086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218045.1;locus_tag=AL55_RS22630;product=hypothetical protein;protein_id=WP_003900086.1;transl_table=11 NZ_KK316829.1 RefSeq gene 22130 22327 . + . ID=gene-AL55_RS22635;Name=AL55_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22635 NZ_KK316829.1 Protein Homology CDS 22130 22327 . + 0 ID=cds-WP_003908266.1;Parent=gene-AL55_RS22635;Dbxref=GenBank:WP_003908266.1;Name=WP_003908266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908266.1;locus_tag=AL55_RS22635;product=hypothetical protein;protein_id=WP_003908266.1;transl_table=11 NZ_KK316829.1 RefSeq gene 22591 23745 . - . ID=gene-AL55_RS22640;Name=AL55_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22640;old_locus_tag=AL55_03500 NZ_KK316829.1 Protein Homology CDS 22591 23745 . - 0 ID=cds-WP_003419222.1;Parent=gene-AL55_RS22640;Dbxref=GenBank:WP_003419222.1;Name=WP_003419222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218046.1;locus_tag=AL55_RS22640;product=TLR2-mediated response inhibitor;protein_id=WP_003419222.1;transl_table=11 NZ_KK316829.1 RefSeq gene 23745 24527 . - . ID=gene-AL55_RS22645;Name=AL55_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22645;old_locus_tag=AL55_03501 NZ_KK316829.1 Protein Homology CDS 23745 24527 . - 0 ID=cds-WP_003419223.1;Parent=gene-AL55_RS22645;Dbxref=GenBank:WP_003419223.1;Name=WP_003419223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218047.1;locus_tag=AL55_RS22645;product=SDR family oxidoreductase;protein_id=WP_003419223.1;transl_table=11 NZ_KK316829.1 RefSeq gene 24524 25651 . - . ID=gene-AL55_RS22650;Name=AL55_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22650;old_locus_tag=AL55_03502 NZ_KK316829.1 Protein Homology CDS 24524 25651 . - 0 ID=cds-WP_003906141.1;Parent=gene-AL55_RS22650;Dbxref=GenBank:WP_003906141.1;Name=WP_003906141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218048.1;locus_tag=AL55_RS22650;product=hypothetical protein;protein_id=WP_003906141.1;transl_table=11 NZ_KK316829.1 RefSeq gene 26050 27270 . + . ID=gene-AL55_RS22655;Name=AL55_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22655;old_locus_tag=AL55_03503 NZ_KK316829.1 Protein Homology CDS 26050 27270 . + 0 ID=cds-WP_003419226.1;Parent=gene-AL55_RS22655;Dbxref=GenBank:WP_003419226.1;Name=WP_003419226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177984.1;locus_tag=AL55_RS22655;product=PPE family protein;protein_id=WP_003419226.1;transl_table=11 NZ_KK316829.1 RefSeq gene 27412 29160 . - . ID=gene-AL55_RS22660;Name=AL55_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22660;old_locus_tag=AL55_03504 NZ_KK316829.1 Protein Homology CDS 27412 29160 . - 0 ID=cds-WP_003900088.1;Parent=gene-AL55_RS22660;Dbxref=GenBank:WP_003900088.1;Name=WP_003900088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177985.1;locus_tag=AL55_RS22660;product=PPE family protein;protein_id=WP_003900088.1;transl_table=11 NZ_KK316829.1 RefSeq gene 29259 30299 . - . ID=gene-AL55_RS22665;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=AL55_RS22665;old_locus_tag=AL55_03505 NZ_KK316829.1 Protein Homology CDS 29259 30299 . - 0 ID=cds-WP_003419250.1;Parent=gene-AL55_RS22665;Dbxref=GenBank:WP_003419250.1;Name=WP_003419250.1;Ontology_term=GO:0009056,GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218051.1;locus_tag=AL55_RS22665;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_003419250.1;transl_table=11 NZ_KK316829.1 RefSeq gene 30296 31207 . - . ID=gene-AL55_RS22670;Name=hsaG;gbkey=Gene;gene=hsaG;gene_biotype=protein_coding;locus_tag=AL55_RS22670;old_locus_tag=AL55_03506 NZ_KK316829.1 Protein Homology CDS 30296 31207 . - 0 ID=cds-WP_003419251.1;Parent=gene-AL55_RS22670;Dbxref=GenBank:WP_003419251.1;Name=WP_003419251.1;Ontology_term=GO:0009056,GO:0008774;gbkey=CDS;gene=hsaG;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218052.1;locus_tag=AL55_RS22670;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_003419251.1;transl_table=11 NZ_KK316829.1 RefSeq gene 31218 32003 . - . ID=gene-AL55_RS22675;Name=hsaE;gbkey=Gene;gene=hsaE;gene_biotype=protein_coding;locus_tag=AL55_RS22675;old_locus_tag=AL55_03507 NZ_KK316829.1 Protein Homology CDS 31218 32003 . - 0 ID=cds-WP_003419252.1;Parent=gene-AL55_RS22675;Dbxref=GenBank:WP_003419252.1;Name=WP_003419252.1;Ontology_term=GO:0008684,GO:0030145;gbkey=CDS;gene=hsaE;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218053.1;locus_tag=AL55_RS22675;product=2-keto-4-pentenoate hydratase;protein_id=WP_003419252.1;transl_table=11 NZ_KK316829.1 RefSeq gene 32076 33767 . + . ID=gene-AL55_RS22680;Name=kstD;gbkey=Gene;gene=kstD;gene_biotype=protein_coding;locus_tag=AL55_RS22680;old_locus_tag=AL55_03508 NZ_KK316829.1 Protein Homology CDS 32076 33767 . + 0 ID=cds-WP_003911025.1;Parent=gene-AL55_RS22680;Dbxref=GenBank:WP_003911025.1;Name=WP_003911025.1;Ontology_term=GO:0006694,GO:0016042,GO:0047571;gbkey=CDS;gene=kstD;go_function=3-oxosteroid 1-dehydrogenase activity|0047571||IEA;go_process=steroid biosynthetic process|0006694||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218054.1;locus_tag=AL55_RS22680;product=3-oxosteroid 1-dehydrogenase;protein_id=WP_003911025.1;transl_table=11 NZ_KK316829.1 RefSeq gene 33769 34629 . + . ID=gene-AL55_RS22685;Name=AL55_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22685;old_locus_tag=AL55_03509 NZ_KK316829.1 Protein Homology CDS 33769 34629 . + 0 ID=cds-WP_003419285.1;Parent=gene-AL55_RS22685;Dbxref=GenBank:WP_003419285.1;Name=WP_003419285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177986.1;locus_tag=AL55_RS22685;product=dehydrogenase;protein_id=WP_003419285.1;transl_table=11 NZ_KK316829.1 RefSeq gene 34766 36205 . + . ID=gene-AL55_RS22690;Name=AL55_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22690;old_locus_tag=AL55_03510 NZ_KK316829.1 Protein Homology CDS 34766 36205 . + 0 ID=cds-WP_003900090.1;Parent=gene-AL55_RS22690;Dbxref=GenBank:WP_003900090.1;Name=WP_003900090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177987.1;locus_tag=AL55_RS22690;product=PPE family protein;protein_id=WP_003900090.1;transl_table=11 NZ_KK316829.1 RefSeq gene 36206 37366 . - . ID=gene-AL55_RS22695;Name=AL55_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22695;old_locus_tag=AL55_03511 NZ_KK316829.1 Protein Homology CDS 36206 37366 . - 0 ID=cds-WP_003901667.1;Parent=gene-AL55_RS22695;Dbxref=GenBank:WP_003901667.1;Name=WP_003901667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218057.1;locus_tag=AL55_RS22695;product=lipid-transfer protein;protein_id=WP_003901667.1;transl_table=11 NZ_KK316829.1 RefSeq gene 37366 37755 . - . ID=gene-AL55_RS22700;Name=chsH1;gbkey=Gene;gene=chsH1;gene_biotype=protein_coding;locus_tag=AL55_RS22700;old_locus_tag=AL55_03512 NZ_KK316829.1 Protein Homology CDS 37366 37755 . - 0 ID=cds-WP_003419290.1;Parent=gene-AL55_RS22700;Dbxref=GenBank:WP_003419290.1;Name=WP_003419290.1;gbkey=CDS;gene=chsH1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218058.1;locus_tag=AL55_RS22700;product=3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-CoA hydratase subunit beta ChsH1;protein_id=WP_003419290.1;transl_table=11 NZ_KK316829.1 RefSeq gene 37752 38687 . - . ID=gene-AL55_RS22705;Name=chsH2;gbkey=Gene;gene=chsH2;gene_biotype=protein_coding;locus_tag=AL55_RS22705;old_locus_tag=AL55_03513 NZ_KK316829.1 Protein Homology CDS 37752 38687 . - 0 ID=cds-WP_003419293.1;Parent=gene-AL55_RS22705;Dbxref=GenBank:WP_003419293.1;Name=WP_003419293.1;gbkey=CDS;gene=chsH2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218059.1;locus_tag=AL55_RS22705;product=3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-CoA hydratase subunit alpha ChsH2;protein_id=WP_003419293.1;transl_table=11 NZ_KK316829.1 RefSeq gene 38684 39847 . - . ID=gene-AL55_RS22710;Name=fadE29;gbkey=Gene;gene=fadE29;gene_biotype=protein_coding;locus_tag=AL55_RS22710;old_locus_tag=AL55_03514 NZ_KK316829.1 Protein Homology CDS 38684 39847 . - 0 ID=cds-WP_003419296.1;Parent=gene-AL55_RS22710;Dbxref=GenBank:WP_003419296.1;Name=WP_003419296.1;gbkey=CDS;gene=fadE29;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218060.1;locus_tag=AL55_RS22710;product=acyl-CoA dehydrogenase FadE29;protein_id=WP_003419296.1;transl_table=11 NZ_KK316829.1 RefSeq gene 39832 40851 . - . ID=gene-AL55_RS22715;Name=fadE28;gbkey=Gene;gene=fadE28;gene_biotype=protein_coding;locus_tag=AL55_RS22715;old_locus_tag=AL55_03515 NZ_KK316829.1 Protein Homology CDS 39832 40851 . - 0 ID=cds-WP_003419299.1;Parent=gene-AL55_RS22715;Dbxref=GenBank:WP_003419299.1;Name=WP_003419299.1;gbkey=CDS;gene=fadE28;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218061.1;locus_tag=AL55_RS22715;product=acyl-CoA dehydrogenase FadE28;protein_id=WP_003419299.1;transl_table=11 NZ_KK316829.1 RefSeq gene 40851 42104 . - . ID=gene-AL55_RS22720;Name=cyp125;gbkey=Gene;gene=cyp125;gene_biotype=protein_coding;locus_tag=AL55_RS22720;old_locus_tag=AL55_03516 NZ_KK316829.1 Protein Homology CDS 40851 42104 . - 0 ID=cds-WP_003912260.1;Parent=gene-AL55_RS22720;Dbxref=GenBank:WP_003912260.1;Name=WP_003912260.1;gbkey=CDS;gene=cyp125;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938697.1;locus_tag=AL55_RS22720;product=steroid C26-monooxygenase Cyp125;protein_id=WP_003912260.1;transl_table=11 NZ_KK316829.1 RefSeq gene 42264 43439 . + . ID=gene-AL55_RS22725;Name=AL55_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22725;old_locus_tag=AL55_03517 NZ_KK316829.1 Protein Homology CDS 42264 43439 . + 0 ID=cds-WP_003419307.1;Parent=gene-AL55_RS22725;Dbxref=GenBank:WP_003419307.1;Name=WP_003419307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218063.1;locus_tag=AL55_RS22725;product=steroid 3-ketoacyl-CoA thiolase;protein_id=WP_003419307.1;transl_table=11 NZ_KK316829.1 RefSeq gene 43551 44006 . + . ID=gene-AL55_RS22730;Name=ddn;gbkey=Gene;gene=ddn;gene_biotype=protein_coding;locus_tag=AL55_RS22730;old_locus_tag=AL55_03518 NZ_KK316829.1 Protein Homology CDS 43551 44006 . + 0 ID=cds-WP_003419309.1;Parent=gene-AL55_RS22730;Dbxref=GenBank:WP_003419309.1;Name=WP_003419309.1;gbkey=CDS;gene=ddn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218064.1;locus_tag=AL55_RS22730;product=deazaflavin-dependent nitroreductase Ddn;protein_id=WP_003419309.1;transl_table=11 NZ_KK316829.1 RefSeq gene 44088 45002 . - . ID=gene-AL55_RS22735;Name=AL55_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22735;old_locus_tag=AL55_03519 NZ_KK316829.1 Protein Homology CDS 44088 45002 . - 0 ID=cds-WP_003900711.1;Parent=gene-AL55_RS22735;Dbxref=GenBank:WP_003900711.1;Name=WP_003900711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218065.1;locus_tag=AL55_RS22735;product=SDR family oxidoreductase;protein_id=WP_003900711.1;transl_table=11 NZ_KK316829.1 RefSeq gene 45025 45804 . - . ID=gene-AL55_RS22740;Name=AL55_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22740;old_locus_tag=AL55_03520 NZ_KK316829.1 Protein Homology CDS 45025 45804 . - 0 ID=cds-WP_003419313.1;Parent=gene-AL55_RS22740;Dbxref=GenBank:WP_003419313.1;Name=WP_003419313.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218066.1;locus_tag=AL55_RS22740;product=SDR family oxidoreductase;protein_id=WP_003419313.1;transl_table=11 NZ_KK316829.1 RefSeq gene 45859 46602 . + . ID=gene-AL55_RS22745;Name=echA20;gbkey=Gene;gene=echA20;gene_biotype=protein_coding;locus_tag=AL55_RS22745;old_locus_tag=AL55_03521 NZ_KK316829.1 Protein Homology CDS 45859 46602 . + 0 ID=cds-WP_003419315.1;Parent=gene-AL55_RS22745;Dbxref=GenBank:WP_003419315.1;Name=WP_003419315.1;gbkey=CDS;gene=echA20;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218067.1;locus_tag=AL55_RS22745;product=(7aS)-7a-methyl-1%2C5-dioxo-2%2C3%2C5%2C6%2C7%2C7a-hexahydro-1H-indene-carboxyl-CoA hydrolase;protein_id=WP_003419315.1;transl_table=11 NZ_KK316829.1 RefSeq gene 46602 47480 . + . ID=gene-AL55_RS22750;Name=ipdA;gbkey=Gene;gene=ipdA;gene_biotype=protein_coding;locus_tag=AL55_RS22750;old_locus_tag=AL55_03522 NZ_KK316829.1 Protein Homology CDS 46602 47480 . + 0 ID=cds-WP_003900094.1;Parent=gene-AL55_RS22750;Dbxref=GenBank:WP_003900094.1;Name=WP_003900094.1;gbkey=CDS;gene=ipdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218068.1;locus_tag=AL55_RS22750;product=cholesterol ring-cleaving hydrolase subunit IpdA;protein_id=WP_003900094.1;transl_table=11 NZ_KK316829.1 RefSeq gene 47477 48229 . + . ID=gene-AL55_RS22755;Name=ipdB;gbkey=Gene;gene=ipdB;gene_biotype=protein_coding;locus_tag=AL55_RS22755;old_locus_tag=AL55_03523 NZ_KK316829.1 Protein Homology CDS 47477 48229 . + 0 ID=cds-WP_003419321.1;Parent=gene-AL55_RS22755;Dbxref=GenBank:WP_003419321.1;Name=WP_003419321.1;gbkey=CDS;gene=ipdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218069.1;locus_tag=AL55_RS22755;product=cholesterol ring-cleaving hydrolase subunit IpdB;protein_id=WP_003419321.1;transl_table=11 NZ_KK316829.1 RefSeq gene 48327 49394 . + . ID=gene-AL55_RS22760;Name=ipdC;gbkey=Gene;gene=ipdC;gene_biotype=protein_coding;locus_tag=AL55_RS22760;old_locus_tag=AL55_03524 NZ_KK316829.1 Protein Homology CDS 48327 49394 . + 0 ID=cds-WP_003419324.1;Parent=gene-AL55_RS22760;Dbxref=GenBank:WP_003419324.1;Name=WP_003419324.1;gbkey=CDS;gene=ipdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218070.1;locus_tag=AL55_RS22760;product=(3aS%2C4S%2C5R%2C7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxyl-CoA dehydrogenase;protein_id=WP_003419324.1;transl_table=11 NZ_KK316829.1 RefSeq gene 49391 51448 . + . ID=gene-AL55_RS22765;Name=fdxB;gbkey=Gene;gene=fdxB;gene_biotype=protein_coding;locus_tag=AL55_RS22765;old_locus_tag=AL55_03525 NZ_KK316829.1 Protein Homology CDS 49391 51448 . + 0 ID=cds-WP_003901670.1;Parent=gene-AL55_RS22765;Dbxref=GenBank:WP_003901670.1;Name=WP_003901670.1;Ontology_term=GO:0006629;gbkey=CDS;gene=fdxB;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218071.1;locus_tag=AL55_RS22765;product=fatty acid desaturase;protein_id=WP_003901670.1;transl_table=11 NZ_KK316829.1 RefSeq gene 51536 52405 . - . ID=gene-AL55_RS22770;Name=AL55_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22770;old_locus_tag=AL55_03526 NZ_KK316829.1 Protein Homology CDS 51536 52405 . - 0 ID=cds-WP_003900096.1;Parent=gene-AL55_RS22770;Dbxref=GenBank:WP_003900096.1;Name=WP_003900096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218072.1;locus_tag=AL55_RS22770;product=DUF559 domain-containing protein;protein_id=WP_003900096.1;transl_table=11 NZ_KK316829.1 RefSeq gene 52510 53670 . - . ID=gene-AL55_RS22775;Name=fadA6;gbkey=Gene;gene=fadA6;gene_biotype=protein_coding;locus_tag=AL55_RS22775;old_locus_tag=AL55_03527 NZ_KK316829.1 Protein Homology CDS 52510 53670 . - 0 ID=cds-WP_003419328.1;Parent=gene-AL55_RS22775;Dbxref=GenBank:WP_003419328.1;Name=WP_003419328.1;gbkey=CDS;gene=fadA6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218073.1;locus_tag=AL55_RS22775;product=steroid 3-ketoacyl-CoA thiolase FadA6;protein_id=WP_003419328.1;transl_table=11 NZ_KK316829.1 RefSeq gene 53735 54337 . - . ID=gene-AL55_RS22780;Name=kstR2;gbkey=Gene;gene=kstR2;gene_biotype=protein_coding;locus_tag=AL55_RS22780;old_locus_tag=AL55_03528 NZ_KK316829.1 Protein Homology CDS 53735 54337 . - 0 ID=cds-WP_003419329.1;Parent=gene-AL55_RS22780;Dbxref=GenBank:WP_003419329.1;Name=WP_003419329.1;gbkey=CDS;gene=kstR2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218074.1;locus_tag=AL55_RS22780;product=TetR family transcriptional regulator KstR2;protein_id=WP_003419329.1;transl_table=11 NZ_KK316829.1 RefSeq gene 54686 56344 . + . ID=gene-AL55_RS22785;Name=AL55_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22785;old_locus_tag=AL55_03529 NZ_KK316829.1 Protein Homology CDS 54686 56344 . + 0 ID=cds-WP_003419334.1;Parent=gene-AL55_RS22785;Dbxref=GenBank:WP_003419334.1;Name=WP_003419334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177988.1;locus_tag=AL55_RS22785;product=PPE family protein;protein_id=WP_003419334.1;transl_table=11 NZ_KK316829.1 RefSeq gene 56353 57141 . - . ID=gene-AL55_RS22790;Name=ipdF;gbkey=Gene;gene=ipdF;gene_biotype=protein_coding;locus_tag=AL55_RS22790;old_locus_tag=AL55_03530 NZ_KK316829.1 Protein Homology CDS 56353 57141 . - 0 ID=cds-WP_003900097.1;Parent=gene-AL55_RS22790;Dbxref=GenBank:WP_003900097.1;Name=WP_003900097.1;gbkey=CDS;gene=ipdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218076.1;locus_tag=AL55_RS22790;product=(5R%2C7aS)-5-hydroxy-7a-methyl-1-oxo-2%2C3%2C5%2C6%2C7%2C7a-hexahydro-1H-indene-carboxyl-CoA reductase;protein_id=WP_003900097.1;transl_table=11 NZ_KK316829.1 RefSeq gene 57138 58295 . - . ID=gene-AL55_RS22795;Name=ipdE1;gbkey=Gene;gene=ipdE1;gene_biotype=protein_coding;gene_synonym=fadE30;locus_tag=AL55_RS22795;old_locus_tag=AL55_03531 NZ_KK316829.1 Protein Homology CDS 57138 58295 . - 0 ID=cds-WP_003419340.1;Parent=gene-AL55_RS22795;Dbxref=GenBank:WP_003419340.1;Name=WP_003419340.1;gbkey=CDS;gene=ipdE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218077.1;locus_tag=AL55_RS22795;product=acyl-CoA dehydrogenase IpdE1;protein_id=WP_003419340.1;transl_table=11 NZ_KK316829.1 RefSeq gene 58343 59866 . + . ID=gene-AL55_RS22800;Name=fadD3;gbkey=Gene;gene=fadD3;gene_biotype=protein_coding;locus_tag=AL55_RS22800;old_locus_tag=AL55_03532 NZ_KK316829.1 Protein Homology CDS 58343 59866 . + 0 ID=cds-WP_003900098.1;Parent=gene-AL55_RS22800;Dbxref=GenBank:WP_003900098.1;Name=WP_003900098.1;gbkey=CDS;gene=fadD3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218078.1;locus_tag=AL55_RS22800;product=3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydro-1H-inden-4-yl)propanoate--CoA ligase FadD3;protein_id=WP_003900098.1;transl_table=11 NZ_KK316829.1 RefSeq gene 59867 61000 . + . ID=gene-AL55_RS22805;Name=AL55_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22805;old_locus_tag=AL55_03533 NZ_KK316829.1 Protein Homology CDS 59867 61000 . + 0 ID=cds-WP_003419346.1;Parent=gene-AL55_RS22805;Dbxref=GenBank:WP_003419346.1;Name=WP_003419346.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218079.1;locus_tag=AL55_RS22805;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003419346.1;transl_table=11 NZ_KK316829.1 RefSeq gene 60997 61956 . + . ID=gene-AL55_RS22810;Name=AL55_RS22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22810;old_locus_tag=AL55_03534 NZ_KK316829.1 Protein Homology CDS 60997 61956 . + 0 ID=cds-WP_003902521.1;Parent=gene-AL55_RS22810;Dbxref=GenBank:WP_003902521.1;Name=WP_003902521.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218080.1;locus_tag=AL55_RS22810;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003902521.1;transl_table=11 NZ_KK316829.1 RefSeq gene 61953 62909 . + . ID=gene-AL55_RS22815;Name=ipdE2;gbkey=Gene;gene=ipdE2;gene_biotype=protein_coding;gene_synonym=fadE33;locus_tag=AL55_RS22815;old_locus_tag=AL55_03535 NZ_KK316829.1 Protein Homology CDS 61953 62909 . + 0 ID=cds-WP_003419352.1;Parent=gene-AL55_RS22815;Dbxref=GenBank:WP_003419352.1;Name=WP_003419352.1;Ontology_term=GO:0006707,GO:0003995,GO:0050660;gbkey=CDS;gene=ipdE2;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cholesterol catabolic process|0006707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218081.1;locus_tag=AL55_RS22815;product=acyl-CoA dehydrogenase IpdE2;protein_id=WP_003419352.1;transl_table=11 NZ_KK316829.1 RefSeq gene 62906 64072 . + . ID=gene-AL55_RS22820;Name=aspB;gbkey=Gene;gene=aspB;gene_biotype=protein_coding;locus_tag=AL55_RS22820;old_locus_tag=AL55_03536 NZ_KK316829.1 Protein Homology CDS 62906 64072 . + 0 ID=cds-WP_003419356.1;Parent=gene-AL55_RS22820;Dbxref=GenBank:WP_003419356.1;Name=WP_003419356.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;gene=aspB;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218082.1;locus_tag=AL55_RS22820;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_003419356.1;transl_table=11 NZ_KK316829.1 RefSeq gene 64037 64888 . - . ID=gene-AL55_RS22825;Name=nat;gbkey=Gene;gene=nat;gene_biotype=protein_coding;locus_tag=AL55_RS22825;old_locus_tag=AL55_03537 NZ_KK316829.1 Protein Homology CDS 64037 64888 . - 0 ID=cds-WP_003419364.1;Parent=gene-AL55_RS22825;Dbxref=GenBank:WP_003419364.1;Name=WP_003419364.1;gbkey=CDS;gene=nat;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177989.1;locus_tag=AL55_RS22825;product=arylamine N-acetyltransferase;protein_id=WP_003419364.1;transl_table=11 NZ_KK316829.1 RefSeq gene 64873 65139 . - . ID=gene-AL55_RS22830;Name=AL55_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22830;old_locus_tag=AL55_03538 NZ_KK316829.1 Protein Homology CDS 64873 65139 . - 0 ID=cds-WP_003419367.1;Parent=gene-AL55_RS22830;Dbxref=GenBank:WP_003419367.1;Name=WP_003419367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177990.1;locus_tag=AL55_RS22830;product=hypothetical protein;protein_id=WP_003419367.1;transl_table=11 NZ_KK316829.1 RefSeq gene 65170 65340 . - . ID=gene-AL55_RS27400;Name=AL55_RS27400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27400 NZ_KK316829.1 Protein Homology CDS 65170 65340 . - 0 ID=cds-WP_003906149.1;Parent=gene-AL55_RS27400;Dbxref=GenBank:WP_003906149.1;Name=WP_003906149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003906149.1;locus_tag=AL55_RS27400;product=hypothetical protein;protein_id=WP_003906149.1;transl_table=11 NZ_KK316829.1 RefSeq gene 65425 65988 . - . ID=gene-AL55_RS22835;Name=hsaB;gbkey=Gene;gene=hsaB;gene_biotype=protein_coding;locus_tag=AL55_RS22835;old_locus_tag=AL55_03539 NZ_KK316829.1 Protein Homology CDS 65425 65988 . - 0 ID=cds-WP_003419374.1;Parent=gene-AL55_RS22835;Dbxref=GenBank:WP_003419374.1;Name=WP_003419374.1;Ontology_term=GO:0009056,GO:0016042,GO:0036382;gbkey=CDS;gene=hsaB;go_function=flavin reductase (NADH) activity|0036382||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218084.1;locus_tag=AL55_RS22835;product=3-hydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione monooxygenase reductase subunit;protein_id=WP_003419374.1;transl_table=11 NZ_KK316829.1 RefSeq gene 66003 66905 . - . ID=gene-AL55_RS22840;Name=hsaC;gbkey=Gene;gene=hsaC;gene_biotype=protein_coding;gene_synonym=bphC;locus_tag=AL55_RS22840;old_locus_tag=AL55_03540 NZ_KK316829.1 Protein Homology CDS 66003 66905 . - 0 ID=cds-WP_003419378.1;Parent=gene-AL55_RS22840;Dbxref=GenBank:WP_003419378.1;Name=WP_003419378.1;Ontology_term=GO:0009056,GO:0016042,GO:0047071;gbkey=CDS;gene=hsaC;go_function=3%2C4-dihydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione 4%2C5-dioxygenase activity|0047071||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218085.1;locus_tag=AL55_RS22840;product=iron-dependent extradiol dioxygenase HsaC;protein_id=WP_003419378.1;transl_table=11 NZ_KK316829.1 RefSeq gene 66902 67777 . - . ID=gene-AL55_RS22845;Name=hsaD;gbkey=Gene;gene=hsaD;gene_biotype=protein_coding;gene_synonym=bphD;locus_tag=AL55_RS22845;old_locus_tag=AL55_03541 NZ_KK316829.1 Protein Homology CDS 66902 67777 . - 0 ID=cds-WP_003419381.1;Parent=gene-AL55_RS22845;Dbxref=GenBank:WP_003419381.1;Name=WP_003419381.1;Ontology_term=GO:0009056,GO:0016042,GO:0102296;gbkey=CDS;gene=hsaD;go_function=4%2C5-9%2C10-diseco-3-hydroxy-5%2C9%2C17-trioxoandrosta-1(10)%2C2-diene-4-oate hydrolase activity|0102296||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218086.1;locus_tag=AL55_RS22845;product=4%2C5:9%2C10-diseco-3-hydroxy-5%2C9%2C17-trioxoandrosta-1(10)%2C2-diene-4-oate hydrolase;protein_id=WP_003419381.1;transl_table=11 NZ_KK316829.1 RefSeq gene 67792 68976 . - . ID=gene-AL55_RS22850;Name=hsaA;gbkey=Gene;gene=hsaA;gene_biotype=protein_coding;locus_tag=AL55_RS22850;old_locus_tag=AL55_03542 NZ_KK316829.1 Protein Homology CDS 67792 68976 . - 0 ID=cds-WP_003900101.1;Parent=gene-AL55_RS22850;Dbxref=GenBank:WP_003900101.1;Name=WP_003900101.1;Ontology_term=GO:0009056,GO:0016042,GO:0036383;gbkey=CDS;gene=hsaA;go_function=3-hydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione monooxygenase activity|0036383||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218087.1;locus_tag=AL55_RS22850;product=3-hydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione monooxygenase oxygenase subunit;protein_id=WP_003900101.1;transl_table=11 NZ_KK316829.1 RefSeq gene 69123 70199 . + . ID=gene-AL55_RS22855;Name=kshB;gbkey=Gene;gene=kshB;gene_biotype=protein_coding;locus_tag=AL55_RS22855;old_locus_tag=AL55_03543 NZ_KK316829.1 Protein Homology CDS 69123 70199 . + 0 ID=cds-WP_003900102.1;Parent=gene-AL55_RS22855;Dbxref=GenBank:WP_003900102.1;Name=WP_003900102.1;gbkey=CDS;gene=kshB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218088.1;locus_tag=AL55_RS22855;product=3-ketosteroid-9-alpha-hydroxylase reductase subunit;protein_id=WP_003900102.1;transl_table=11 NZ_KK316829.1 RefSeq gene 70217 70747 . + . ID=gene-AL55_RS22860;Name=AL55_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22860;old_locus_tag=AL55_03544 NZ_KK316829.1 Protein Homology CDS 70217 70747 . + 0 ID=cds-WP_003419389.1;Parent=gene-AL55_RS22860;Dbxref=GenBank:WP_003419389.1;Name=WP_003419389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218089.1;locus_tag=AL55_RS22860;product=hypothetical protein;protein_id=WP_003419389.1;transl_table=11 NZ_KK316829.1 RefSeq gene 70783 72918 . - . ID=gene-AL55_RS22865;Name=AL55_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22865;old_locus_tag=AL55_03545 NZ_KK316829.1 Protein Homology CDS 70783 72918 . - 0 ID=cds-WP_003419394.1;Parent=gene-AL55_RS22865;Dbxref=GenBank:WP_003419394.1;Name=WP_003419394.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218090.1;locus_tag=AL55_RS22865;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003419394.1;transl_table=11 NZ_KK316829.1 RefSeq gene 73190 73789 . + . ID=gene-AL55_RS22870;Name=kstR;gbkey=Gene;gene=kstR;gene_biotype=protein_coding;locus_tag=AL55_RS22870;old_locus_tag=AL55_03546 NZ_KK316829.1 Protein Homology CDS 73190 73789 . + 0 ID=cds-WP_003419397.1;Parent=gene-AL55_RS22870;Dbxref=GenBank:WP_003419397.1;Name=WP_003419397.1;Ontology_term=GO:0003677;gbkey=CDS;gene=kstR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218091.3;locus_tag=AL55_RS22870;product=cholesterol catabolism transcriptional regulator KstR;protein_id=WP_003419397.1;transl_table=11 NZ_KK316829.1 RefSeq gene 73795 74874 . - . ID=gene-AL55_RS22875;Name=AL55_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22875;old_locus_tag=AL55_03547 NZ_KK316829.1 Protein Homology CDS 73795 74874 . - 0 ID=cds-WP_003419400.1;Parent=gene-AL55_RS22875;Dbxref=GenBank:WP_003419400.1;Name=WP_003419400.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218092.1;locus_tag=AL55_RS22875;product=Rv3575c family transcriptional regulator;protein_id=WP_003419400.1;transl_table=11 NZ_KK316829.1 RefSeq gene 75064 75777 . + . ID=gene-AL55_RS22880;Name=lppH;gbkey=Gene;gene=lppH;gene_biotype=protein_coding;locus_tag=AL55_RS22880;old_locus_tag=AL55_03548 NZ_KK316829.1 Protein Homology CDS 75064 75777 . + 0 ID=cds-WP_003900105.1;Parent=gene-AL55_RS22880;Dbxref=GenBank:WP_003900105.1;Name=WP_003900105.1;gbkey=CDS;gene=lppH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177991.1;locus_tag=AL55_RS22880;product=sensor domain-containing protein;protein_id=WP_003900105.1;transl_table=11 NZ_KK316829.1 RefSeq gene 75914 76834 . + . ID=gene-AL55_RS22885;Name=AL55_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22885;old_locus_tag=AL55_03549 NZ_KK316829.1 Protein Homology CDS 75914 76834 . + 0 ID=cds-WP_003900106.1;Parent=gene-AL55_RS22885;Dbxref=GenBank:WP_003900106.1;Name=WP_003900106.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900106.1;locus_tag=AL55_RS22885;product=MBL fold metallo-hydrolase;protein_id=WP_003900106.1;transl_table=11 NZ_KK316829.1 RefSeq gene 76848 78089 . + . ID=gene-AL55_RS22890;Name=AL55_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22890;old_locus_tag=AL55_03550 NZ_KK316829.1 Protein Homology CDS 76848 78089 . + 0 ID=cds-WP_003419420.1;Parent=gene-AL55_RS22890;Dbxref=GenBank:WP_003419420.1;Name=WP_003419420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218095.1;locus_tag=AL55_RS22890;product=SLC13 family permease;protein_id=WP_003419420.1;transl_table=11 NZ_KK316829.1 RefSeq gene 78131 79099 . - . ID=gene-AL55_RS22895;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=AL55_RS22895;old_locus_tag=AL55_03551 NZ_KK316829.1 Protein Homology CDS 78131 79099 . - 0 ID=cds-WP_003900107.1;Parent=gene-AL55_RS22895;Dbxref=GenBank:WP_003900107.1;Name=WP_003900107.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218096.1;locus_tag=AL55_RS22895;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_003900107.1;transl_table=11 NZ_KK316829.1 RefSeq gene 79100 80509 . - . ID=gene-AL55_RS22900;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AL55_RS22900;old_locus_tag=AL55_03552 NZ_KK316829.1 Protein Homology CDS 79100 80509 . - 0 ID=cds-WP_003900108.1;Parent=gene-AL55_RS22900;Dbxref=GenBank:WP_003900108.1;Name=WP_003900108.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177992.1;locus_tag=AL55_RS22900;product=cysteine--tRNA ligase;protein_id=WP_003900108.1;transl_table=11 NZ_KK316829.1 RefSeq gene 80574 81053 . - . ID=gene-AL55_RS22905;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AL55_RS22905;old_locus_tag=AL55_03553 NZ_KK316829.1 Protein Homology CDS 80574 81053 . - 0 ID=cds-WP_003419432.1;Parent=gene-AL55_RS22905;Dbxref=GenBank:WP_003419432.1;Name=WP_003419432.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218098.1;locus_tag=AL55_RS22905;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_003419432.1;transl_table=11 NZ_KK316829.1 RefSeq gene 81050 81745 . - . ID=gene-AL55_RS22910;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AL55_RS22910;old_locus_tag=AL55_03554 NZ_KK316829.1 Protein Homology CDS 81050 81745 . - 0 ID=cds-WP_003419436.1;Parent=gene-AL55_RS22910;Dbxref=GenBank:WP_003419436.1;Name=WP_003419436.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218099.1;locus_tag=AL55_RS22910;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_003419436.1;transl_table=11 NZ_KK316829.1 RefSeq gene 81762 82250 . - . ID=gene-AL55_RS22915;Name=carD;gbkey=Gene;gene=carD;gene_biotype=protein_coding;locus_tag=AL55_RS22915;old_locus_tag=AL55_03555 NZ_KK316829.1 Protein Homology CDS 81762 82250 . - 0 ID=cds-WP_003419482.1;Parent=gene-AL55_RS22915;Dbxref=GenBank:WP_003419482.1;Name=WP_003419482.1;gbkey=CDS;gene=carD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218100.1;locus_tag=AL55_RS22915;product=RNA polymerase-binding transcription factor CarD;protein_id=WP_003419482.1;transl_table=11 NZ_KK316829.1 RefSeq gene 82536 83084 . + . ID=gene-AL55_RS22920;Name=AL55_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22920;old_locus_tag=AL55_03556 NZ_KK316829.1 Protein Homology CDS 82536 83084 . + 0 ID=cds-WP_003900715.1;Parent=gene-AL55_RS22920;Dbxref=GenBank:WP_003900715.1;Name=WP_003900715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218101.1;locus_tag=AL55_RS22920;product=copper chaperone PCu(A)C domain-containing protein;protein_id=WP_003900715.1;transl_table=11 NZ_KK316829.1 RefSeq gene 83150 84592 . + . ID=gene-AL55_RS22925;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=AL55_RS22925;old_locus_tag=AL55_03557 NZ_KK316829.1 Protein Homology CDS 83150 84592 . + 0 ID=cds-WP_003419487.1;Parent=gene-AL55_RS22925;Dbxref=GenBank:WP_003419487.1;Name=WP_003419487.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218102.1;locus_tag=AL55_RS22925;product=DNA repair protein RadA;protein_id=WP_003419487.1;transl_table=11 NZ_KK316829.1 RefSeq gene 84597 85673 . + . ID=gene-AL55_RS22930;Name=disA;gbkey=Gene;gene=disA;gene_biotype=protein_coding;locus_tag=AL55_RS22930;old_locus_tag=AL55_03558 NZ_KK316829.1 Protein Homology CDS 84597 85673 . + 0 ID=cds-WP_003419489.1;Parent=gene-AL55_RS22930;Dbxref=GenBank:WP_003419489.1;Name=WP_003419489.1;gbkey=CDS;gene=disA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218103.1;locus_tag=AL55_RS22930;product=DNA integrity scanning diadenylate cyclase DisA;protein_id=WP_003419489.1;transl_table=11 NZ_KK316829.1 RefSeq gene 85674 86468 . - . ID=gene-AL55_RS22935;Name=AL55_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22935;old_locus_tag=AL55_03559 NZ_KK316829.1 Protein Homology CDS 85674 86468 . - 0 ID=cds-WP_003419490.1;Parent=gene-AL55_RS22935;Dbxref=GenBank:WP_003419490.1;Name=WP_003419490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218104.1;locus_tag=AL55_RS22935;product=hypothetical protein;protein_id=WP_003419490.1;transl_table=11 NZ_KK316829.1 RefSeq gene 86577 87200 . - . ID=gene-AL55_RS22940;Name=canB;gbkey=Gene;gene=canB;gene_biotype=protein_coding;locus_tag=AL55_RS22940;old_locus_tag=AL55_03560 NZ_KK316829.1 Protein Homology CDS 86577 87200 . - 0 ID=cds-WP_003419492.1;Parent=gene-AL55_RS22940;Dbxref=GenBank:WP_003419492.1;Name=WP_003419492.1;gbkey=CDS;gene=canB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218105.1;locus_tag=AL55_RS22940;product=beta-carbonic anhydrase CanB;protein_id=WP_003419492.1;transl_table=11 NZ_KK316829.1 RefSeq gene 87199 88113 . + . ID=gene-AL55_RS22945;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=AL55_RS22945;old_locus_tag=AL55_03561 NZ_KK316829.1 Protein Homology CDS 87199 88113 . + 0 ID=cds-WP_003419495.1;Parent=gene-AL55_RS22945;Dbxref=GenBank:WP_003419495.1;Name=WP_003419495.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218106.1;locus_tag=AL55_RS22945;product=HhH-GPD family protein;protein_id=WP_003419495.1;transl_table=11 NZ_KK316829.1 RefSeq gene 88110 89864 . - . ID=gene-AL55_RS22950;Name=AL55_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22950;old_locus_tag=AL55_03562 NZ_KK316829.1 Protein Homology CDS 88110 89864 . - 0 ID=cds-WP_003911026.1;Parent=gene-AL55_RS22950;Dbxref=GenBank:WP_003911026.1;Name=WP_003911026.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177993.1;locus_tag=AL55_RS22950;product=PE family protein;protein_id=WP_003911026.1;transl_table=11 NZ_KK316829.1 RefSeq gene 89975 90748 . - . ID=gene-AL55_RS22955;Name=AL55_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22955;old_locus_tag=AL55_03563 NZ_KK316829.1 Protein Homology CDS 89975 90748 . - 0 ID=cds-WP_003906153.1;Parent=gene-AL55_RS22955;Dbxref=GenBank:WP_003906153.1;Name=WP_003906153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218108.1;locus_tag=AL55_RS22955;product=alpha/beta fold hydrolase;protein_id=WP_003906153.1;transl_table=11 NZ_KK316829.1 RefSeq gene 90763 91080 . + . ID=gene-AL55_RS22960;Name=mhuD;gbkey=Gene;gene=mhuD;gene_biotype=protein_coding;locus_tag=AL55_RS22960;old_locus_tag=AL55_03564 NZ_KK316829.1 Protein Homology CDS 90763 91080 . + 0 ID=cds-WP_003419501.1;Parent=gene-AL55_RS22960;Dbxref=GenBank:WP_003419501.1;Name=WP_003419501.1;gbkey=CDS;gene=mhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218109.1;locus_tag=AL55_RS22960;product=mycobilin-forming heme oxygenase MhuD;protein_id=WP_003419501.1;transl_table=11 NZ_KK316829.1 RefSeq gene 91058 92416 . + . ID=gene-AL55_RS22965;Name=lpqF;gbkey=Gene;gene=lpqF;gene_biotype=protein_coding;locus_tag=AL55_RS22965;old_locus_tag=AL55_03565 NZ_KK316829.1 Protein Homology CDS 91058 92416 . + 0 ID=cds-WP_003900716.1;Parent=gene-AL55_RS22965;Dbxref=GenBank:WP_003900716.1;Name=WP_003900716.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;gene=lpqF;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218110.1;locus_tag=AL55_RS22965;product=serine hydrolase;protein_id=WP_003900716.1;transl_table=11 NZ_KK316829.1 RefSeq gene 92563 93390 . + . ID=gene-AL55_RS22970;Name=AL55_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22970;old_locus_tag=AL55_03566 NZ_KK316829.1 Protein Homology CDS 92563 93390 . + 0 ID=cds-WP_003419504.1;Parent=gene-AL55_RS22970;Dbxref=GenBank:WP_003419504.1;Name=WP_003419504.1;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218111.1;locus_tag=AL55_RS22970;product=peptidoglycan recognition protein family protein;protein_id=WP_003419504.1;transl_table=11 NZ_KK316829.1 RefSeq gene 93437 94756 . - . ID=gene-AL55_RS22975;Name=AL55_RS22975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS22975;old_locus_tag=AL55_03567 NZ_KK316829.1 Protein Homology CDS 93437 94756 . - 0 ID=cds-WP_003911027.1;Parent=gene-AL55_RS22975;Dbxref=GenBank:WP_003911027.1;Name=WP_003911027.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177994.1;locus_tag=AL55_RS22975;product=PE family protein;protein_id=WP_003911027.1;transl_table=11 NZ_KK316829.1 RefSeq gene 94864 97410 . - . ID=gene-AL55_RS22980;Name=clpC1;gbkey=Gene;gene=clpC1;gene_biotype=protein_coding;locus_tag=AL55_RS22980;old_locus_tag=AL55_03568 NZ_KK316829.1 Protein Homology CDS 94864 97410 . - 0 ID=cds-WP_003419511.1;Parent=gene-AL55_RS22980;Dbxref=GenBank:WP_003419511.1;Name=WP_003419511.1;gbkey=CDS;gene=clpC1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177995.1;locus_tag=AL55_RS22980;product=ATP-dependent protease ATP-binding subunit ClpC;protein_id=WP_003419511.1;transl_table=11 NZ_KK316829.1 RefSeq gene 97687 98025 . - . ID=gene-AL55_RS22985;Name=lsr2;gbkey=Gene;gene=lsr2;gene_biotype=protein_coding;locus_tag=AL55_RS22985;old_locus_tag=AL55_03569 NZ_KK316829.1 Protein Homology CDS 97687 98025 . - 0 ID=cds-WP_003419513.1;Parent=gene-AL55_RS22985;Dbxref=GenBank:WP_003419513.1;Name=WP_003419513.1;gbkey=CDS;gene=lsr2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218114.1;locus_tag=AL55_RS22985;product=histone-like nucleoid-structuring protein Lsr2;protein_id=WP_003419513.1;transl_table=11 NZ_KK316829.1 RefSeq gene 98129 99646 . - . ID=gene-AL55_RS22990;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AL55_RS22990;old_locus_tag=AL55_03570 NZ_KK316829.1 Protein Homology CDS 98129 99646 . - 0 ID=cds-WP_003901683.1;Parent=gene-AL55_RS22990;Dbxref=GenBank:WP_003901683.1;Name=WP_003901683.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218115.1;locus_tag=AL55_RS22990;product=lysine--tRNA ligase;protein_id=WP_003901683.1;transl_table=11 NZ_KK316829.1 RefSeq gene 99747 100565 . - . ID=gene-AL55_RS23000;Name=AL55_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23000;old_locus_tag=AL55_03572 NZ_KK316829.1 Protein Homology CDS 99747 100565 . - 0 ID=cds-WP_003419517.1;Parent=gene-AL55_RS23000;Dbxref=GenBank:WP_003419517.1;Name=WP_003419517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218117.1;locus_tag=AL55_RS23000;product=type III pantothenate kinase;protein_id=WP_003419517.1;transl_table=11 NZ_KK316829.1 RefSeq gene 100568 100987 . - . ID=gene-AL55_RS23005;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=AL55_RS23005;old_locus_tag=AL55_03573 NZ_KK316829.1 Protein Homology CDS 100568 100987 . - 0 ID=cds-WP_003419523.1;Parent=gene-AL55_RS23005;Dbxref=GenBank:WP_003419523.1;Name=WP_003419523.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218118.1;locus_tag=AL55_RS23005;product=aspartate 1-decarboxylase;protein_id=WP_003419523.1;transl_table=11 NZ_KK316829.1 RefSeq gene 100987 101916 . - . ID=gene-AL55_RS23010;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AL55_RS23010;old_locus_tag=AL55_03574 NZ_KK316829.1 Protein Homology CDS 100987 101916 . - 0 ID=cds-WP_003419526.1;Parent=gene-AL55_RS23010;Dbxref=GenBank:WP_003419526.1;Name=WP_003419526.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218119.1;locus_tag=AL55_RS23010;product=pantoate--beta-alanine ligase;protein_id=WP_003419526.1;transl_table=11 NZ_KK316829.1 RefSeq gene 101913 102824 . - . ID=gene-AL55_RS23015;Name=AL55_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23015;old_locus_tag=AL55_03575 NZ_KK316829.1 Protein Homology CDS 101913 102824 . - 0 ID=cds-WP_003419533.1;Parent=gene-AL55_RS23015;Dbxref=GenBank:WP_003419533.1;Name=WP_003419533.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218120.1;locus_tag=AL55_RS23015;product=Rossmann-like and DUF2520 domain-containing protein;protein_id=WP_003419533.1;transl_table=11 NZ_KK316829.1 RefSeq gene 103009 104202 . - . ID=gene-AL55_RS23020;Name=AL55_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23020;old_locus_tag=AL55_03576 NZ_KK316829.1 Protein Homology CDS 103009 104202 . - 0 ID=cds-WP_003899595.1;Parent=gene-AL55_RS23020;Dbxref=GenBank:WP_003899595.1;Name=WP_003899595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218121.2;locus_tag=AL55_RS23020;product=DUF6779 domain-containing protein;protein_id=WP_003899595.1;transl_table=11 NZ_KK316829.1 RefSeq gene 104411 104887 . - . ID=gene-AL55_RS23025;Name=AL55_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23025;old_locus_tag=AL55_03577 NZ_KK316829.1 Protein Homology CDS 104411 104887 . - 0 ID=cds-WP_003419535.1;Parent=gene-AL55_RS23025;Dbxref=GenBank:WP_003419535.1;Name=WP_003419535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218122.1;locus_tag=AL55_RS23025;product=DUF3180 domain-containing protein;protein_id=WP_003419535.1;transl_table=11 NZ_KK316829.1 RefSeq gene 104887 105453 . - . ID=gene-AL55_RS23030;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=AL55_RS23030;old_locus_tag=AL55_03578 NZ_KK316829.1 Protein Homology CDS 104887 105453 . - 0 ID=cds-WP_003419536.1;Parent=gene-AL55_RS23030;Dbxref=GenBank:WP_003419536.1;Name=WP_003419536.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218123.1;locus_tag=AL55_RS23030;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_003419536.1;transl_table=11 NZ_KK316829.1 RefSeq gene 105450 105851 . - . ID=gene-AL55_RS23035;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AL55_RS23035;old_locus_tag=AL55_03579 NZ_KK316829.1 Protein Homology CDS 105450 105851 . - 0 ID=cds-WP_003419537.1;Parent=gene-AL55_RS23035;Dbxref=GenBank:WP_003419537.1;Name=WP_003419537.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177996.1;locus_tag=AL55_RS23035;product=dihydroneopterin aldolase;protein_id=WP_003419537.1;transl_table=11 NZ_KK316829.1 RefSeq gene 105844 106686 . - . ID=gene-AL55_RS23040;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AL55_RS23040;old_locus_tag=AL55_03580 NZ_KK316829.1 Protein Homology CDS 105844 106686 . - 0 ID=cds-WP_003899596.1;Parent=gene-AL55_RS23040;Dbxref=GenBank:WP_003899596.1;Name=WP_003899596.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177997.1;locus_tag=AL55_RS23040;product=dihydropteroate synthase;protein_id=WP_003899596.1;transl_table=11 NZ_KK316829.1 RefSeq gene 106683 107291 . - . ID=gene-AL55_RS23045;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AL55_RS23045;old_locus_tag=AL55_03581 NZ_KK316829.1 Protein Homology CDS 106683 107291 . - 0 ID=cds-WP_003899597.1;Parent=gene-AL55_RS23045;Dbxref=GenBank:WP_003899597.1;Name=WP_003899597.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218126.1;locus_tag=AL55_RS23045;product=GTP cyclohydrolase I FolE;protein_id=WP_003899597.1;transl_table=11 NZ_KK316829.1 RefSeq gene 107307 109589 . - . ID=gene-AL55_RS23050;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=AL55_RS23050;old_locus_tag=AL55_03582 NZ_KK316829.1 Protein Homology CDS 107307 109589 . - 0 ID=cds-WP_003419543.1;Parent=gene-AL55_RS23050;Dbxref=GenBank:WP_003419543.1;Name=WP_003419543.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218127.1;locus_tag=AL55_RS23050;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_003419543.1;transl_table=11 NZ_KK316829.1 RefSeq gene 110587 110748 . - . ID=gene-AL55_RS23065;Name=AL55_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23065;old_locus_tag=AL55_03585 NZ_KK316829.1 Protein Homology CDS 110587 110748 . - 0 ID=cds-WP_003902532.1;Parent=gene-AL55_RS23065;Dbxref=GenBank:WP_003902532.1;Name=WP_003902532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218130.1;locus_tag=AL55_RS23065;product=hypothetical protein;protein_id=WP_003902532.1;transl_table=11 NZ_KK316829.1 RefSeq gene 110848 111402 . - . ID=gene-AL55_RS23070;Name=espD;gbkey=Gene;gene=espD;gene_biotype=protein_coding;locus_tag=AL55_RS23070;old_locus_tag=AL55_03586 NZ_KK316829.1 Protein Homology CDS 110848 111402 . - 0 ID=cds-WP_003419545.1;Parent=gene-AL55_RS23070;Dbxref=GenBank:WP_003419545.1;Name=WP_003419545.1;gbkey=CDS;gene=espD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218131.1;locus_tag=AL55_RS23070;product=type VII secretion system ESX-1 target EspD;protein_id=WP_003419545.1;transl_table=11 NZ_KK316829.1 RefSeq gene 111518 111829 . - . ID=gene-AL55_RS23075;Name=espC;gbkey=Gene;gene=espC;gene_biotype=protein_coding;locus_tag=AL55_RS23075;old_locus_tag=AL55_03587 NZ_KK316829.1 Protein Homology CDS 111518 111829 . - 0 ID=cds-WP_003899599.1;Parent=gene-AL55_RS23075;Dbxref=GenBank:WP_003899599.1;Name=WP_003899599.1;gbkey=CDS;gene=espC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218132.1;locus_tag=AL55_RS23075;product=type VII secretion system ESX-1 filament-forming target EspC;protein_id=WP_003899599.1;transl_table=11 NZ_KK316829.1 RefSeq gene 111903 113081 . - . ID=gene-AL55_RS23080;Name=espA;gbkey=Gene;gene=espA;gene_biotype=protein_coding;locus_tag=AL55_RS23080;old_locus_tag=AL55_03588 NZ_KK316829.1 Protein Homology CDS 111903 113081 . - 0 ID=cds-WP_003419551.1;Parent=gene-AL55_RS23080;Dbxref=GenBank:WP_003419551.1;Name=WP_003419551.1;gbkey=CDS;gene=espA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218133.1;locus_tag=AL55_RS23080;product=type VII secretion system ESX-1 target EspA;protein_id=WP_003419551.1;transl_table=11 NZ_KK316829.1 RefSeq gene 114439 115407 . + . ID=gene-AL55_RS23085;Name=ephA;gbkey=Gene;gene=ephA;gene_biotype=protein_coding;locus_tag=AL55_RS23085;old_locus_tag=AL55_03589 NZ_KK316829.1 Protein Homology CDS 114439 115407 . + 0 ID=cds-WP_003899600.1;Parent=gene-AL55_RS23085;Dbxref=GenBank:WP_003899600.1;Name=WP_003899600.1;gbkey=CDS;gene=ephA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218134.1;locus_tag=AL55_RS23085;product=epoxide hydrolase EphA;protein_id=WP_003899600.1;transl_table=11 NZ_KK316829.1 RefSeq gene 115404 116591 . + . ID=gene-AL55_RS23090;Name=AL55_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23090;old_locus_tag=AL55_03590 NZ_KK316829.1 Protein Homology CDS 115404 116591 . + 0 ID=cds-WP_003906163.1;Parent=gene-AL55_RS23090;Dbxref=GenBank:WP_003906163.1;Name=WP_003906163.1;Ontology_term=GO:0010181,GO:0016491,GO:0070967;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218135.1;locus_tag=AL55_RS23090;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_003906163.1;transl_table=11 NZ_KK316829.1 RefSeq gene 116690 116974 . - . ID=gene-AL55_RS23095;Name=esxL;gbkey=Gene;gene=esxL;gene_biotype=protein_coding;locus_tag=AL55_RS23095;old_locus_tag=AL55_03591 NZ_KK316829.1 Protein Homology CDS 116690 116974 . - 0 ID=cds-WP_003900722.1;Parent=gene-AL55_RS23095;Dbxref=GenBank:WP_003900722.1;Name=WP_003900722.1;gbkey=CDS;gene=esxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215553.1;locus_tag=AL55_RS23095;product=type VII secretion system ESX-5 protein EsxL;protein_id=WP_003900722.1;transl_table=11 NZ_KK316829.1 RefSeq gene 117001 117297 . - . ID=gene-AL55_RS23100;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=protein_coding;locus_tag=AL55_RS23100;old_locus_tag=AL55_03592 NZ_KK316829.1 Protein Homology CDS 117001 117297 . - 0 ID=cds-WP_003405345.1-2;Parent=gene-AL55_RS23100;Dbxref=GenBank:WP_003405345.1;Name=WP_003405345.1;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215554.1;locus_tag=AL55_RS23100;product=type VII secretion system ESX-5 protein EsxJ;protein_id=WP_003405345.1;transl_table=11 NZ_KK316829.1 RefSeq gene 117354 118595 . - . ID=gene-AL55_RS23105;Name=AL55_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23105;old_locus_tag=AL55_03593 NZ_KK316829.1 Protein Homology CDS 117354 118595 . - 0 ID=cds-WP_003900723.1;Parent=gene-AL55_RS23105;Dbxref=GenBank:WP_003900723.1;Name=WP_003900723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177998.1;locus_tag=AL55_RS23105;product=PPE family protein;protein_id=WP_003900723.1;transl_table=11 NZ_KK316829.1 RefSeq gene 118605 118904 . - . ID=gene-AL55_RS23110;Name=AL55_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23110;old_locus_tag=AL55_03594 NZ_KK316829.1 Protein Homology CDS 118605 118904 . - 0 ID=cds-WP_003899605.1;Parent=gene-AL55_RS23110;Dbxref=GenBank:WP_003899605.1;Name=WP_003899605.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177999.1;locus_tag=AL55_RS23110;product=PE family protein;protein_id=WP_003899605.1;transl_table=11 NZ_KK316829.1 RefSeq gene 119233 119955 . + . ID=gene-AL55_RS23115;Name=lpqG;gbkey=Gene;gene=lpqG;gene_biotype=protein_coding;locus_tag=AL55_RS23115;old_locus_tag=AL55_03595 NZ_KK316829.1 Protein Homology CDS 119233 119955 . + 0 ID=cds-WP_003899606.1;Parent=gene-AL55_RS23115;Dbxref=GenBank:WP_003899606.1;Name=WP_003899606.1;gbkey=CDS;gene=lpqG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218140.1;locus_tag=AL55_RS23115;product=SIMPL domain-containing protein;protein_id=WP_003899606.1;transl_table=11 NZ_KK316829.1 RefSeq gene 119960 120610 . - . ID=gene-AL55_RS23120;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AL55_RS23120;old_locus_tag=AL55_03596 NZ_KK316829.1 Protein Homology CDS 119960 120610 . - 0 ID=cds-WP_003419558.1;Parent=gene-AL55_RS23120;Dbxref=GenBank:WP_003419558.1;Name=WP_003419558.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218141.1;locus_tag=AL55_RS23120;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_003419558.1;transl_table=11 NZ_KK316829.1 RefSeq gene 120607 121578 . - . ID=gene-AL55_RS23125;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AL55_RS23125;old_locus_tag=AL55_03597 NZ_KK316829.1 Protein Homology CDS 120607 121578 . - 0 ID=cds-WP_031721894.1;Parent=gene-AL55_RS23125;Dbxref=GenBank:WP_031721894.1;Name=WP_031721894.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218142.1;locus_tag=AL55_RS23125;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_031721894.1;transl_table=11 NZ_KK316829.1 RefSeq gene 121557 122609 . - . ID=gene-AL55_RS23130;Name=AL55_RS23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23130;old_locus_tag=AL55_03598 NZ_KK316829.1 Protein Homology CDS 121557 122609 . - 0 ID=cds-WP_003419571.1;Parent=gene-AL55_RS23130;Dbxref=GenBank:WP_003419571.1;Name=WP_003419571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218143.1;locus_tag=AL55_RS23130;product=zinc-dependent metalloprotease;protein_id=WP_003419571.1;transl_table=11 NZ_KK316829.1 RefSeq gene 122606 123991 . - . ID=gene-AL55_RS23135;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AL55_RS23135;old_locus_tag=AL55_03599 NZ_KK316829.1 Protein Homology CDS 122606 123991 . - 0 ID=cds-WP_003899610.1;Parent=gene-AL55_RS23135;Dbxref=GenBank:WP_003899610.1;Name=WP_003899610.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218144.1;locus_tag=AL55_RS23135;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase;protein_id=WP_003899610.1;transl_table=11 NZ_KK316829.1 RefSeq gene 124129 124617 . + . ID=gene-AL55_RS23140;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AL55_RS23140;old_locus_tag=AL55_03600 NZ_KK316829.1 Protein Homology CDS 124129 124617 . + 0 ID=cds-WP_003419577.1;Parent=gene-AL55_RS23140;Dbxref=GenBank:WP_003419577.1;Name=WP_003419577.1;gbkey=CDS;gene=ppa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218145.1;locus_tag=AL55_RS23140;product=inorganic diphosphatase;protein_id=WP_003419577.1;transl_table=11 NZ_KK316829.1 RefSeq gene 124663 125760 . - . ID=gene-AL55_RS23145;Name=AL55_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23145;old_locus_tag=AL55_03601 NZ_KK316829.1 Protein Homology CDS 124663 125760 . - 0 ID=cds-WP_003419580.1;Parent=gene-AL55_RS23145;Dbxref=GenBank:WP_003419580.1;Name=WP_003419580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218146.1;locus_tag=AL55_RS23145;product=DUF475 domain-containing protein;protein_id=WP_003419580.1;transl_table=11 NZ_KK316829.1 RefSeq gene 125881 127176 . + . ID=gene-AL55_RS23150;Name=AL55_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23150;old_locus_tag=AL55_03602 NZ_KK316829.1 Protein Homology CDS 125881 127176 . + 0 ID=cds-WP_003419582.1;Parent=gene-AL55_RS23150;Dbxref=GenBank:WP_003419582.1;Name=WP_003419582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218147.1;locus_tag=AL55_RS23150;product=hypothetical protein;protein_id=WP_003419582.1;transl_table=11 NZ_KK316829.1 RefSeq gene 127220 127945 . + . ID=gene-AL55_RS23155;Name=AL55_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23155;old_locus_tag=AL55_03603 NZ_KK316829.1 Protein Homology CDS 127220 127945 . + 0 ID=cds-WP_003419585.1;Parent=gene-AL55_RS23155;Dbxref=GenBank:WP_003419585.1;Name=WP_003419585.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218148.1;locus_tag=AL55_RS23155;product=glycosyltransferase family 2 protein;protein_id=WP_003419585.1;transl_table=11 NZ_KK316829.1 RefSeq gene 127942 128286 . + . ID=gene-AL55_RS23160;Name=AL55_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23160;old_locus_tag=AL55_03604 NZ_KK316829.1 Protein Homology CDS 127942 128286 . + 0 ID=cds-WP_003419590.1;Parent=gene-AL55_RS23160;Dbxref=GenBank:WP_003419590.1;Name=WP_003419590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218149.1;locus_tag=AL55_RS23160;product=DUF2304 domain-containing protein;protein_id=WP_003419590.1;transl_table=11 NZ_KK316829.1 RefSeq gene 128497 129372 . + . ID=gene-AL55_RS23165;Name=AL55_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23165;old_locus_tag=AL55_03605 NZ_KK316829.1 Protein Homology CDS 128497 129372 . + 0 ID=cds-WP_003419601.1;Parent=gene-AL55_RS23165;Dbxref=GenBank:WP_003419601.1;Name=WP_003419601.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218150.1;locus_tag=AL55_RS23165;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_003419601.1;transl_table=11 NZ_KK316829.1 RefSeq gene 129373 130317 . - . ID=gene-AL55_RS23170;Name=galE1;gbkey=Gene;gene=galE1;gene_biotype=protein_coding;locus_tag=AL55_RS23170;old_locus_tag=AL55_03606 NZ_KK316829.1 Protein Homology CDS 129373 130317 . - 0 ID=cds-WP_003419610.1;Parent=gene-AL55_RS23170;Dbxref=GenBank:WP_003419610.1;Name=WP_003419610.1;gbkey=CDS;gene=galE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215015.2;locus_tag=AL55_RS23170;product=UDP-glucose 4-epimerase;protein_id=WP_003419610.1;transl_table=11 NZ_KK316829.1 RefSeq gene 130340 132115 . + . ID=gene-AL55_RS23175;Name=AL55_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23175;old_locus_tag=AL55_03607 NZ_KK316829.1 Protein Homology CDS 130340 132115 . + 0 ID=cds-WP_003419613.1;Parent=gene-AL55_RS23175;Dbxref=GenBank:WP_003419613.1;Name=WP_003419613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218152.1;locus_tag=AL55_RS23175;product=hypothetical protein;protein_id=WP_003419613.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 132458 133690 . + . ID=gene-AL55_RS26605;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=AL55_RS26605;pseudo=true NZ_KK316829.1 Protein Homology CDS 132458 133690 . + 0 ID=cds-AL55_RS26605;Parent=gene-AL55_RS26605;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414864.1;locus_tag=AL55_RS26605;product=IS21 family transposase;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq gene 133690 134436 . + . ID=gene-AL55_RS23190;Name=AL55_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23190;old_locus_tag=AL55_03610 NZ_KK316829.1 Protein Homology CDS 133690 134436 . + 0 ID=cds-WP_003899614.1;Parent=gene-AL55_RS23190;Dbxref=GenBank:WP_003899614.1;Name=WP_003899614.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218155.1;locus_tag=AL55_RS23190;product=ATP-binding protein;protein_id=WP_003899614.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 134812 134907 . + . ID=gene-AL55_RS28285;Name=AL55_RS28285;end_range=134907,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28285;partial=true;pseudo=true;start_range=.,134812 NZ_KK316829.1 Protein Homology CDS 134812 134907 . + 0 ID=cds-AL55_RS28285;Parent=gene-AL55_RS28285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=134907,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=AL55_RS28285;partial=true;product=hypothetical protein;pseudo=true;start_range=.,134812;transl_table=11 NZ_KK316829.1 RefSeq gene 135226 136455 . - . ID=gene-AL55_RS23200;Name=AL55_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23200;old_locus_tag=AL55_03612 NZ_KK316829.1 Protein Homology CDS 135226 136455 . - 0 ID=cds-WP_003899615.1;Parent=gene-AL55_RS23200;Dbxref=GenBank:WP_003899615.1;Name=WP_003899615.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218157.1;locus_tag=AL55_RS23200;product=IS256-like element IS1553 family transposase;protein_id=WP_003899615.1;transl_table=11 NZ_KK316829.1 RefSeq gene 136631 137266 . - . ID=gene-AL55_RS23205;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=AL55_RS23205;old_locus_tag=AL55_03613 NZ_KK316829.1 Protein Homology CDS 136631 137266 . - 0 ID=cds-WP_003899616.1;Parent=gene-AL55_RS23205;Dbxref=GenBank:WP_003899616.1;Name=WP_003899616.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=fic;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218158.1;locus_tag=AL55_RS23205;product=Fic/DOC family protein;protein_id=WP_003899616.1;transl_table=11 NZ_KK316829.1 RefSeq gene 137277 137471 . - . ID=gene-AL55_RS23210;Name=AL55_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23210;old_locus_tag=AL55_03614 NZ_KK316829.1 Protein Homology CDS 137277 137471 . - 0 ID=cds-WP_003419627.1;Parent=gene-AL55_RS23210;Dbxref=GenBank:WP_003419627.1;Name=WP_003419627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218159.1;locus_tag=AL55_RS23210;product=antitoxin VbhA family protein;protein_id=WP_003419627.1;transl_table=11 NZ_KK316829.1 RefSeq gene 137636 137770 . + . ID=gene-AL55_RS27950;Name=AL55_RS27950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27950 NZ_KK316829.1 Protein Homology CDS 137636 137770 . + 0 ID=cds-WP_003419630.1;Parent=gene-AL55_RS27950;Dbxref=GenBank:WP_003419630.1;Name=WP_003419630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419630.1;locus_tag=AL55_RS27950;product=hypothetical protein;protein_id=WP_003419630.1;transl_table=11 NZ_KK316829.1 RefSeq gene 137866 138057 . + . ID=gene-AL55_RS23215;Name=AL55_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23215;old_locus_tag=AL55_03615 NZ_KK316829.1 Protein Homology CDS 137866 138057 . + 0 ID=cds-WP_003419633.1;Parent=gene-AL55_RS23215;Dbxref=GenBank:WP_003419633.1;Name=WP_003419633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218160.1;locus_tag=AL55_RS23215;product=hypothetical protein;protein_id=WP_003419633.1;transl_table=11 NZ_KK316829.1 RefSeq gene 138068 138143 . - . ID=gene-AL55_RS23220;Name=AL55_RS23220;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS23220;old_locus_tag=AL55_03616 NZ_KK316829.1 tRNAscan-SE tRNA 138068 138143 . - . ID=rna-AL55_RS23220;Parent=gene-AL55_RS23220;anticodon=(pos:complement(138108..138110));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS23220;product=tRNA-Thr NZ_KK316829.1 tRNAscan-SE exon 138068 138143 . - . ID=exon-AL55_RS23220-1;Parent=rna-AL55_RS23220;anticodon=(pos:complement(138108..138110));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS23220;product=tRNA-Thr NZ_KK316829.1 RefSeq gene 138222 139427 . - . ID=gene-AL55_RS23225;Name=AL55_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23225;old_locus_tag=AL55_03617 NZ_KK316829.1 Protein Homology CDS 138222 139427 . - 0 ID=cds-WP_003419637.1;Parent=gene-AL55_RS23225;Dbxref=GenBank:WP_003419637.1;Name=WP_003419637.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408,GO:0009360;gbkey=CDS;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218161.1;locus_tag=AL55_RS23225;product=DNA polymerase III subunit delta';protein_id=WP_003419637.1;transl_table=11 NZ_KK316829.1 RefSeq gene 139513 141162 . + . ID=gene-AL55_RS23230;Name=AL55_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23230;old_locus_tag=AL55_03618 NZ_KK316829.1 Protein Homology CDS 139513 141162 . + 0 ID=cds-WP_003419638.1;Parent=gene-AL55_RS23230;Dbxref=GenBank:WP_003419638.1;Name=WP_003419638.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218162.1;locus_tag=AL55_RS23230;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003419638.1;transl_table=11 NZ_KK316829.1 RefSeq gene 141159 143963 . - . ID=gene-AL55_RS23235;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AL55_RS23235;old_locus_tag=AL55_03619 NZ_KK316829.1 Protein Homology CDS 141159 143963 . - 0 ID=cds-WP_003899617.1;Parent=gene-AL55_RS23235;Dbxref=GenBank:WP_003899617.1;Name=WP_003899617.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218163.1;locus_tag=AL55_RS23235;product=type I DNA topoisomerase;protein_id=WP_003899617.1;transl_table=11 NZ_KK316829.1 RefSeq gene 144316 144894 . - . ID=gene-AL55_RS23240;Name=AL55_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23240;old_locus_tag=AL55_03620 NZ_KK316829.1 Protein Homology CDS 144316 144894 . - 0 ID=cds-WP_003419642.1;Parent=gene-AL55_RS23240;Dbxref=GenBank:WP_003419642.1;Name=WP_003419642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218164.1;locus_tag=AL55_RS23240;product=hypothetical protein;protein_id=WP_003419642.1;transl_table=11 NZ_KK316829.1 RefSeq gene 145034 145237 . - . ID=gene-AL55_RS23245;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=AL55_RS23245;old_locus_tag=AL55_03621 NZ_KK316829.1 Protein Homology CDS 145034 145237 . - 0 ID=cds-WP_003419650.1;Parent=gene-AL55_RS23245;Dbxref=GenBank:WP_003419650.1;Name=WP_003419650.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218165.1;locus_tag=AL55_RS23245;product=cold shock protein CspA;protein_id=WP_003419650.1;transl_table=11 NZ_KK316829.1 RefSeq gene 145487 147802 . + . ID=gene-AL55_RS23250;Name=AL55_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23250;old_locus_tag=AL55_03622 NZ_KK316829.1 Protein Homology CDS 145487 147802 . + 0 ID=cds-WP_003419652.1;Parent=gene-AL55_RS23250;Dbxref=GenBank:WP_003419652.1;Name=WP_003419652.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218166.1;locus_tag=AL55_RS23250;product=DEAD/DEAH box helicase;protein_id=WP_003419652.1;transl_table=11 NZ_KK316829.1 RefSeq gene 147939 148223 . + . ID=gene-AL55_RS23255;Name=AL55_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23255;old_locus_tag=AL55_03623 NZ_KK316829.1 Protein Homology CDS 147939 148223 . + 0 ID=cds-WP_003419654.1;Parent=gene-AL55_RS23255;Dbxref=GenBank:WP_003419654.1;Name=WP_003419654.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178000.1;locus_tag=AL55_RS23255;product=PE family protein;protein_id=WP_003419654.1;transl_table=11 NZ_KK316829.1 RefSeq gene 148547 149584 . + . ID=gene-AL55_RS23260;Name=AL55_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23260;old_locus_tag=AL55_03624 NZ_KK316829.1 Protein Homology CDS 148547 149584 . + 0 ID=cds-WP_003419657.1;Parent=gene-AL55_RS23260;Dbxref=GenBank:WP_003419657.1;Name=WP_003419657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218168.1;locus_tag=AL55_RS23260;product=PAS domain-containing protein;protein_id=WP_003419657.1;transl_table=11 NZ_KK316829.1 RefSeq gene 149727 149882 . - . ID=gene-AL55_RS27405;Name=AL55_RS27405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27405 NZ_KK316829.1 Protein Homology CDS 149727 149882 . - 0 ID=cds-WP_003917826.1;Parent=gene-AL55_RS27405;Dbxref=GenBank:WP_003917826.1;Name=WP_003917826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291617.1;locus_tag=AL55_RS27405;product=hypothetical protein;protein_id=WP_003917826.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 150338 150555 . + . ID=gene-AL55_RS27830;Name=AL55_RS27830;end_range=150555,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27830;old_locus_tag=AL55_03625;partial=true;pseudo=true NZ_KK316829.1 Protein Homology CDS 150338 150555 . + 0 ID=cds-AL55_RS27830;Parent=gene-AL55_RS27830;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;end_range=150555,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL55_RS27830;partial=true;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq gene 150646 151251 . + . ID=gene-AL55_RS23270;Name=AL55_RS23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23270;old_locus_tag=AL55_03626 NZ_KK316829.1 Protein Homology CDS 150646 151251 . + 0 ID=cds-WP_024753814.1;Parent=gene-AL55_RS23270;Dbxref=GenBank:WP_024753814.1;Name=WP_024753814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178002.1;locus_tag=AL55_RS23270;product=PGRS repeat-containing protein;protein_id=WP_024753814.1;transl_table=11 NZ_KK316829.1 RefSeq gene 151384 151692 . - . ID=gene-AL55_RS23275;Name=AL55_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23275;old_locus_tag=AL55_03627 NZ_KK316829.1 Protein Homology CDS 151384 151692 . - 0 ID=cds-WP_012054375.1;Parent=gene-AL55_RS23275;Dbxref=GenBank:WP_012054375.1;Name=WP_012054375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003925186.1;locus_tag=AL55_RS23275;product=Rv3654c family TadE-like protein;protein_id=WP_012054375.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 151647 152023 . - . ID=gene-AL55_RS23280;Name=AL55_RS23280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS23280;old_locus_tag=AL55_03628;pseudo=true NZ_KK316829.1 Protein Homology CDS 151647 152023 . - 0 ID=cds-AL55_RS23280;Parent=gene-AL55_RS23280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218172.1;locus_tag=AL55_RS23280;product=apoptosis inhibitor;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq gene 152047 152253 . - . ID=gene-AL55_RS23285;Name=AL55_RS23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23285;old_locus_tag=AL55_03629 NZ_KK316829.1 Protein Homology CDS 152047 152253 . - 0 ID=cds-WP_003419673.1;Parent=gene-AL55_RS23285;Dbxref=GenBank:WP_003419673.1;Name=WP_003419673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218173.1;locus_tag=AL55_RS23285;product=DUF4244 domain-containing protein;protein_id=WP_003419673.1;transl_table=11 NZ_KK316829.1 RefSeq gene 152263 152865 . - . ID=gene-AL55_RS23290;Name=AL55_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23290;old_locus_tag=AL55_03630 NZ_KK316829.1 Protein Homology CDS 152263 152865 . - 0 ID=cds-WP_003899622.1;Parent=gene-AL55_RS23290;Dbxref=GenBank:WP_003899622.1;Name=WP_003899622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015456535.1;locus_tag=AL55_RS23290;product=type II secretion system F family protein;protein_id=WP_003899622.1;transl_table=11 NZ_KK316829.1 RefSeq gene 152862 153662 . - . ID=gene-AL55_RS23295;Name=AL55_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23295;old_locus_tag=AL55_03631 NZ_KK316829.1 Protein Homology CDS 152862 153662 . - 0 ID=cds-WP_003419679.1;Parent=gene-AL55_RS23295;Dbxref=GenBank:WP_003419679.1;Name=WP_003419679.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218175.1;locus_tag=AL55_RS23295;product=type II secretion system F family protein;protein_id=WP_003419679.1;transl_table=11 NZ_KK316829.1 RefSeq gene 153659 154822 . - . ID=gene-AL55_RS23300;Name=AL55_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23300;old_locus_tag=AL55_03632 NZ_KK316829.1 Protein Homology CDS 153659 154822 . - 0 ID=cds-WP_003899624.1;Parent=gene-AL55_RS23300;Dbxref=GenBank:WP_003899624.1;Name=WP_003899624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899624.1;locus_tag=AL55_RS23300;product=TadA family conjugal transfer-associated ATPase;protein_id=WP_003899624.1;transl_table=11 NZ_KK316829.1 RefSeq gene 154819 155871 . - . ID=gene-AL55_RS23305;Name=ssd;gbkey=Gene;gene=ssd;gene_biotype=protein_coding;locus_tag=AL55_RS23305;old_locus_tag=AL55_03633 NZ_KK316829.1 Protein Homology CDS 154819 155871 . - 0 ID=cds-WP_003900732.1;Parent=gene-AL55_RS23305;Dbxref=GenBank:WP_003900732.1;Name=WP_003900732.1;gbkey=CDS;gene=ssd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218177.1;locus_tag=AL55_RS23305;product=septum site-determining protein Ssd;protein_id=WP_003900732.1;transl_table=11 NZ_KK316829.1 RefSeq gene 156370 157233 . + . ID=gene-AL55_RS23310;Name=AL55_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23310;old_locus_tag=AL55_03634 NZ_KK316829.1 Protein Homology CDS 156370 157233 . + 0 ID=cds-WP_003419689.1;Parent=gene-AL55_RS23310;Dbxref=GenBank:WP_003419689.1;Name=WP_003419689.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218178.1;locus_tag=AL55_RS23310;product=HAD-IB family hydrolase;protein_id=WP_003419689.1;transl_table=11 NZ_KK316829.1 RefSeq gene 157988 158758 . - . ID=gene-AL55_RS23315;Name=AL55_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23315;old_locus_tag=AL55_03635 NZ_KK316829.1 Protein Homology CDS 157988 158758 . - 0 ID=cds-WP_003899626.1;Parent=gene-AL55_RS23315;Dbxref=GenBank:WP_003899626.1;Name=WP_003899626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218179.1;locus_tag=AL55_RS23315;product=Fic family protein;protein_id=WP_003899626.1;transl_table=11 NZ_KK316829.1 RefSeq gene 158755 160401 . - . ID=gene-AL55_RS23320;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AL55_RS23320;old_locus_tag=AL55_03636 NZ_KK316829.1 Protein Homology CDS 158755 160401 . - 0 ID=cds-WP_003900733.1;Parent=gene-AL55_RS23320;Dbxref=GenBank:WP_003900733.1;Name=WP_003900733.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=dppD;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218180.1;locus_tag=AL55_RS23320;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_003900733.1;transl_table=11 NZ_KK316829.1 RefSeq gene 160398 161261 . - . ID=gene-AL55_RS23325;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=AL55_RS23325;old_locus_tag=AL55_03637 NZ_KK316829.1 Protein Homology CDS 160398 161261 . - 0 ID=cds-WP_003899628.1;Parent=gene-AL55_RS23325;Dbxref=GenBank:WP_003899628.1;Name=WP_003899628.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=dppC;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020785225.1;locus_tag=AL55_RS23325;product=ABC transporter permease;protein_id=WP_003899628.1;transl_table=11 NZ_KK316829.1 RefSeq gene 161254 162180 . - . ID=gene-AL55_RS23330;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=AL55_RS23330;old_locus_tag=AL55_03638 NZ_KK316829.1 Protein Homology CDS 161254 162180 . - 0 ID=cds-WP_003419701.1;Parent=gene-AL55_RS23330;Dbxref=GenBank:WP_003419701.1;Name=WP_003419701.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218182.1;locus_tag=AL55_RS23330;product=ABC transporter permease;protein_id=WP_003419701.1;transl_table=11 NZ_KK316829.1 RefSeq gene 162182 163807 . - . ID=gene-AL55_RS23335;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=AL55_RS23335;old_locus_tag=AL55_03639 NZ_KK316829.1 Protein Homology CDS 162182 163807 . - 0 ID=cds-WP_003901692.1;Parent=gene-AL55_RS23335;Dbxref=GenBank:WP_003901692.1;Name=WP_003901692.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=dppA;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218183.1;locus_tag=AL55_RS23335;product=peptide ABC transporter substrate-binding protein;protein_id=WP_003901692.1;transl_table=11 NZ_KK316829.1 RefSeq gene 164515 166470 . + . ID=gene-AL55_RS23340;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=AL55_RS23340;old_locus_tag=AL55_03641 NZ_KK316829.1 Protein Homology CDS 164515 166470 . + 0 ID=cds-WP_003899631.1;Parent=gene-AL55_RS23340;Dbxref=GenBank:WP_003899631.1;Name=WP_003899631.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218184.1;locus_tag=AL55_RS23340;product=acetate--CoA ligase;protein_id=WP_003899631.1;transl_table=11 NZ_KK316829.1 RefSeq gene 166506 167204 . - . ID=gene-AL55_RS23345;Name=AL55_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23345;old_locus_tag=AL55_03642 NZ_KK316829.1 Protein Homology CDS 166506 167204 . - 0 ID=cds-WP_003419708.1;Parent=gene-AL55_RS23345;Dbxref=GenBank:WP_003419708.1;Name=WP_003419708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218185.1;locus_tag=AL55_RS23345;product=protease;protein_id=WP_003419708.1;transl_table=11 NZ_KK316829.1 RefSeq gene 167550 168068 . + . ID=gene-AL55_RS23350;Name=AL55_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23350;old_locus_tag=AL55_03643 NZ_KK316829.1 Protein Homology CDS 167550 168068 . + 0 ID=cds-WP_003419710.1;Parent=gene-AL55_RS23350;Dbxref=GenBank:WP_003419710.1;Name=WP_003419710.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218186.1;locus_tag=AL55_RS23350;product=phage holin family protein;protein_id=WP_003419710.1;transl_table=11 NZ_KK316829.1 RefSeq gene 168069 169052 . + . ID=gene-AL55_RS23355;Name=ephE;gbkey=Gene;gene=ephE;gene_biotype=protein_coding;locus_tag=AL55_RS23355;old_locus_tag=AL55_03644 NZ_KK316829.1 Protein Homology CDS 168069 169052 . + 0 ID=cds-WP_003419712.1;Parent=gene-AL55_RS23355;Dbxref=GenBank:WP_003419712.1;Name=WP_003419712.1;gbkey=CDS;gene=ephE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218187.1;locus_tag=AL55_RS23355;product=alpha/beta fold hydrolase;protein_id=WP_003419712.1;transl_table=11 NZ_KK316829.1 RefSeq gene 169045 170238 . - . ID=gene-AL55_RS23360;Name=marP;gbkey=Gene;gene=marP;gene_biotype=protein_coding;locus_tag=AL55_RS23360;old_locus_tag=AL55_03645 NZ_KK316829.1 Protein Homology CDS 169045 170238 . - 0 ID=cds-WP_003419714.1;Parent=gene-AL55_RS23360;Dbxref=GenBank:WP_003419714.1;Name=WP_003419714.1;gbkey=CDS;gene=marP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218188.1;locus_tag=AL55_RS23360;product=acid resistance serine protease MarP;protein_id=WP_003419714.1;transl_table=11 NZ_KK316829.1 RefSeq gene 170244 171065 . - . ID=gene-AL55_RS23365;Name=AL55_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23365;old_locus_tag=AL55_03646 NZ_KK316829.1 Protein Homology CDS 170244 171065 . - 0 ID=cds-WP_003419718.1;Parent=gene-AL55_RS23365;Dbxref=GenBank:WP_003419718.1;Name=WP_003419718.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218189.1;locus_tag=AL55_RS23365;product=NUDIX hydrolase;protein_id=WP_003419718.1;transl_table=11 NZ_KK316829.1 RefSeq gene 171197 171844 . - . ID=gene-AL55_RS23370;Name=AL55_RS23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23370;old_locus_tag=AL55_03647 NZ_KK316829.1 Protein Homology CDS 171197 171844 . - 0 ID=cds-WP_003912310.1;Parent=gene-AL55_RS23370;Dbxref=GenBank:WP_003912310.1;Name=WP_003912310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912310.1;locus_tag=AL55_RS23370;product=TlpA family protein disulfide reductase;protein_id=WP_003912310.1;transl_table=11 NZ_KK316829.1 RefSeq gene 171880 172617 . - . ID=gene-AL55_RS23375;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AL55_RS23375;old_locus_tag=AL55_03648 NZ_KK316829.1 Protein Homology CDS 171880 172617 . - 0 ID=cds-WP_003902541.1;Parent=gene-AL55_RS23375;Dbxref=GenBank:WP_003902541.1;Name=WP_003902541.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218191.2;locus_tag=AL55_RS23375;product=endonuclease III;protein_id=WP_003902541.1;transl_table=11 NZ_KK316829.1 RefSeq gene 172725 173102 . + . ID=gene-AL55_RS23380;Name=AL55_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23380;old_locus_tag=AL55_03649 NZ_KK316829.1 Protein Homology CDS 172725 173102 . + 0 ID=cds-WP_003899635.1;Parent=gene-AL55_RS23380;Dbxref=GenBank:WP_003899635.1;Name=WP_003899635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218192.1;locus_tag=AL55_RS23380;product=hypothetical protein;protein_id=WP_003899635.1;transl_table=11 NZ_KK316829.1 RefSeq gene 173201 173875 . + . ID=gene-AL55_RS23385;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=AL55_RS23385;old_locus_tag=AL55_03650 NZ_KK316829.1 Protein Homology CDS 173201 173875 . + 0 ID=cds-WP_003906177.1;Parent=gene-AL55_RS23385;Dbxref=GenBank:WP_003906177.1;Name=WP_003906177.1;gbkey=CDS;gene=crp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218193.1;locus_tag=AL55_RS23385;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_003906177.1;transl_table=11 NZ_KK316829.1 RefSeq gene 173981 174775 . - . ID=gene-AL55_RS23390;Name=AL55_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23390;old_locus_tag=AL55_03651 NZ_KK316829.1 Protein Homology CDS 173981 174775 . - 0 ID=cds-WP_003419731.1;Parent=gene-AL55_RS23390;Dbxref=GenBank:WP_003419731.1;Name=WP_003419731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218194.1;locus_tag=AL55_RS23390;product=MBL fold metallo-hydrolase;protein_id=WP_003419731.1;transl_table=11 NZ_KK316829.1 RefSeq gene 174782 175237 . - . ID=gene-AL55_RS23395;Name=AL55_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23395;old_locus_tag=AL55_03652 NZ_KK316829.1 Protein Homology CDS 174782 175237 . - 0 ID=cds-WP_003419733.1;Parent=gene-AL55_RS23395;Dbxref=GenBank:WP_003419733.1;Name=WP_003419733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218195.1;locus_tag=AL55_RS23395;product=RidA family protein;protein_id=WP_003419733.1;transl_table=11 NZ_KK316829.1 RefSeq gene 175253 175414 . - . ID=gene-AL55_RS23400;Name=AL55_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23400;old_locus_tag=AL55_03653 NZ_KK316829.1 Protein Homology CDS 175253 175414 . - 0 ID=cds-WP_003419736.1;Parent=gene-AL55_RS23400;Dbxref=GenBank:WP_003419736.1;Name=WP_003419736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178004.1;locus_tag=AL55_RS23400;product=Sp36 family protein;protein_id=WP_003419736.1;transl_table=11 NZ_KK316829.1 RefSeq gene 175499 176521 . + . ID=gene-AL55_RS23405;Name=AL55_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23405;old_locus_tag=AL55_03654 NZ_KK316829.1 Protein Homology CDS 175499 176521 . + 0 ID=cds-WP_003419738.1;Parent=gene-AL55_RS23405;Dbxref=GenBank:WP_003419738.1;Name=WP_003419738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218196.1;locus_tag=AL55_RS23405;product=ATPase BagA;protein_id=WP_003419738.1;transl_table=11 NZ_KK316829.1 RefSeq gene 176518 177678 . + . ID=gene-AL55_RS23410;Name=AL55_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23410;old_locus_tag=AL55_03655 NZ_KK316829.1 Protein Homology CDS 176518 177678 . + 0 ID=cds-WP_003902543.1;Parent=gene-AL55_RS23410;Dbxref=GenBank:WP_003902543.1;Name=WP_003902543.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218197.1;locus_tag=AL55_RS23410;product=ATPase BagB;protein_id=WP_003902543.1;transl_table=11 NZ_KK316829.1 RefSeq gene 178383 178739 . - . ID=gene-AL55_RS23415;Name=whiB4;gbkey=Gene;gene=whiB4;gene_biotype=protein_coding;locus_tag=AL55_RS23415;old_locus_tag=AL55_03656 NZ_KK316829.1 Protein Homology CDS 178383 178739 . - 0 ID=cds-WP_003419743.1;Parent=gene-AL55_RS23415;Dbxref=GenBank:WP_003419743.1;Name=WP_003419743.1;gbkey=CDS;gene=whiB4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218198.2;locus_tag=AL55_RS23415;product=transcriptional regulator WhiB4;protein_id=WP_003419743.1;transl_table=11 NZ_KK316829.1 RefSeq gene 179101 181533 . + . ID=gene-AL55_RS23420;Name=ponA2;gbkey=Gene;gene=ponA2;gene_biotype=protein_coding;locus_tag=AL55_RS23420;old_locus_tag=AL55_03657 NZ_KK316829.1 Protein Homology CDS 179101 181533 . + 0 ID=cds-WP_003906179.1;Parent=gene-AL55_RS23420;Dbxref=GenBank:WP_003906179.1;Name=WP_003906179.1;gbkey=CDS;gene=ponA2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178005.1;locus_tag=AL55_RS23420;product=transglycosylase/D%2CD-transpeptidase PonA2;protein_id=WP_003906179.1;transl_table=11 NZ_KK316829.1 RefSeq gene 181600 182559 . + . ID=gene-AL55_RS23425;Name=AL55_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23425;old_locus_tag=AL55_03658 NZ_KK316829.1 Protein Homology CDS 181600 182559 . + 0 ID=cds-WP_003899637.1;Parent=gene-AL55_RS23425;Dbxref=GenBank:WP_003899637.1;Name=WP_003899637.1;Ontology_term=GO:0016311,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218200.1;locus_tag=AL55_RS23425;product=metallophosphoesterase;protein_id=WP_003899637.1;transl_table=11 NZ_KK316829.1 RefSeq gene 182556 183662 . + . ID=gene-AL55_RS23430;Name=AL55_RS23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23430;old_locus_tag=AL55_03659 NZ_KK316829.1 Protein Homology CDS 182556 183662 . + 0 ID=cds-WP_003419750.1;Parent=gene-AL55_RS23430;Dbxref=GenBank:WP_003419750.1;Name=WP_003419750.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419750.1;locus_tag=AL55_RS23430;product=L-cysteine desulfhydrase Cds1;protein_id=WP_003419750.1;transl_table=11 NZ_KK316829.1 RefSeq gene 183724 183797 . + . ID=gene-AL55_RS23435;Name=AL55_RS23435;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS23435;old_locus_tag=AL55_03660 NZ_KK316829.1 tRNAscan-SE tRNA 183724 183797 . + . ID=rna-AL55_RS23435;Parent=gene-AL55_RS23435;anticodon=(pos:183758..183760);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS23435;product=tRNA-Pro NZ_KK316829.1 tRNAscan-SE exon 183724 183797 . + . ID=exon-AL55_RS23435-1;Parent=rna-AL55_RS23435;anticodon=(pos:183758..183760);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS23435;product=tRNA-Pro NZ_KK316829.1 RefSeq pseudogene 184220 184444 . + . ID=gene-AL55_RS28135;Name=AL55_RS28135;end_range=184444,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28135;partial=true;pseudo=true;start_range=.,184220 NZ_KK316829.1 Protein Homology CDS 184220 184444 . + 0 ID=cds-AL55_RS28135;Parent=gene-AL55_RS28135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=184444,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.6;locus_tag=AL55_RS28135;partial=true;product=Fic family protein;pseudo=true;start_range=.,184220;transl_table=11 NZ_KK316829.1 RefSeq gene 184478 185908 . - . ID=gene-AL55_RS23440;Name=AL55_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23440;old_locus_tag=AL55_03661 NZ_KK316829.1 Protein Homology CDS 184478 185908 . - 0 ID=cds-WP_003419754.1;Parent=gene-AL55_RS23440;Dbxref=GenBank:WP_003419754.1;Name=WP_003419754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218202.1;locus_tag=AL55_RS23440;product=cytochrome P450;protein_id=WP_003419754.1;transl_table=11 NZ_KK316829.1 RefSeq gene 185934 186266 . - . ID=gene-AL55_RS23445;Name=AL55_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23445;old_locus_tag=AL55_03662 NZ_KK316829.1 Protein Homology CDS 185934 186266 . - 0 ID=cds-WP_003901696.1;Parent=gene-AL55_RS23445;Dbxref=GenBank:WP_003901696.1;Name=WP_003901696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218203.1;locus_tag=AL55_RS23445;product=hypothetical protein;protein_id=WP_003901696.1;transl_table=11 NZ_KK316829.1 RefSeq gene 186506 186874 . - . ID=gene-AL55_RS23450;Name=rsfB;gbkey=Gene;gene=rsfB;gene_biotype=protein_coding;locus_tag=AL55_RS23450;old_locus_tag=AL55_03663 NZ_KK316829.1 Protein Homology CDS 186506 186874 . - 0 ID=cds-WP_003419762.1;Parent=gene-AL55_RS23450;Dbxref=GenBank:WP_003419762.1;Name=WP_003419762.1;Ontology_term=GO:0006355,GO:0043856;gbkey=CDS;gene=rsfB;go_function=anti-sigma factor antagonist activity|0043856||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218204.1;locus_tag=AL55_RS23450;product=STAS domain-containing protein;protein_id=WP_003419762.1;transl_table=11 NZ_KK316829.1 RefSeq gene 187076 187540 . - . ID=gene-AL55_RS23455;Name=AL55_RS23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23455;old_locus_tag=AL55_03664 NZ_KK316829.1 Protein Homology CDS 187076 187540 . - 0 ID=cds-WP_003419765.1;Parent=gene-AL55_RS23455;Dbxref=GenBank:WP_003419765.1;Name=WP_003419765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218205.1;locus_tag=AL55_RS23455;product=GatB/YqeY domain-containing protein;protein_id=WP_003419765.1;transl_table=11 NZ_KK316829.1 RefSeq gene 187540 188895 . + . ID=gene-AL55_RS23460;Name=AL55_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23460;old_locus_tag=AL55_03665 NZ_KK316829.1 Protein Homology CDS 187540 188895 . + 0 ID=cds-WP_003899640.1;Parent=gene-AL55_RS23460;Dbxref=GenBank:WP_003899640.1;Name=WP_003899640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631611.1;locus_tag=AL55_RS23460;product=DUF7847 domain-containing protein;protein_id=WP_003899640.1;transl_table=11 NZ_KK316829.1 RefSeq gene 188922 189575 . + . ID=gene-AL55_RS23465;Name=AL55_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23465;old_locus_tag=AL55_03666 NZ_KK316829.1 Protein Homology CDS 188922 189575 . + 0 ID=cds-WP_003419770.1;Parent=gene-AL55_RS23465;Dbxref=GenBank:WP_003419770.1;Name=WP_003419770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218207.1;locus_tag=AL55_RS23465;product=DUF4129 domain-containing protein;protein_id=WP_003419770.1;transl_table=11 NZ_KK316829.1 RefSeq gene 189557 190702 . + . ID=gene-AL55_RS23470;Name=AL55_RS23470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23470;old_locus_tag=AL55_03667 NZ_KK316829.1 Protein Homology CDS 189557 190702 . + 0 ID=cds-WP_016810355.1;Parent=gene-AL55_RS23470;Dbxref=GenBank:WP_016810355.1;Name=WP_016810355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899642.1;locus_tag=AL55_RS23470;product=DUF4350 domain-containing protein;protein_id=WP_016810355.1;transl_table=11 NZ_KK316829.1 RefSeq gene 190699 191775 . + . ID=gene-AL55_RS23475;Name=AL55_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23475;old_locus_tag=AL55_03668 NZ_KK316829.1 Protein Homology CDS 190699 191775 . + 0 ID=cds-WP_003419775.1;Parent=gene-AL55_RS23475;Dbxref=GenBank:WP_003419775.1;Name=WP_003419775.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218209.1;locus_tag=AL55_RS23475;product=AAA family ATPase;protein_id=WP_003419775.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 191784 191855 . + . ID=gene-AL55_RS28290;Name=AL55_RS28290;end_range=191855,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28290;partial=true;pseudo=true NZ_KK316829.1 Protein Homology CDS 191784 191855 . + 0 ID=cds-AL55_RS28290;Parent=gene-AL55_RS28290;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=191855,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=AL55_RS28290;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq gene 191909 193231 . + . ID=gene-AL55_RS23480;Name=AL55_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23480;old_locus_tag=AL55_03669 NZ_KK316829.1 Protein Homology CDS 191909 193231 . + 0 ID=cds-WP_003419776.1;Parent=gene-AL55_RS23480;Dbxref=GenBank:WP_003419776.1;Name=WP_003419776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218210.1;locus_tag=AL55_RS23480;product=DUF58 domain-containing protein;protein_id=WP_003419776.1;transl_table=11 NZ_KK316829.1 RefSeq gene 193305 194297 . - . ID=gene-AL55_RS23485;Name=AL55_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23485;old_locus_tag=AL55_03670 NZ_KK316829.1 Protein Homology CDS 193305 194297 . - 0 ID=cds-WP_003419778.1;Parent=gene-AL55_RS23485;Dbxref=GenBank:WP_003419778.1;Name=WP_003419778.1;Ontology_term=GO:0030435,GO:0042173,GO:1901893;gbkey=CDS;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA,regulation of sporulation resulting in formation of a cellular spore|0042173||IEA,positive regulation of cell septum assembly|1901893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218211.1;locus_tag=AL55_RS23485;product=stage II sporulation protein M;protein_id=WP_003419778.1;transl_table=11 NZ_KK316829.1 RefSeq gene 194389 195321 . + . ID=gene-AL55_RS23490;Name=AL55_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23490;old_locus_tag=AL55_03671 NZ_KK316829.1 Protein Homology CDS 194389 195321 . + 0 ID=cds-WP_003419780.1;Parent=gene-AL55_RS23490;Dbxref=GenBank:WP_003419780.1;Name=WP_003419780.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218212.1;locus_tag=AL55_RS23490;product=RDD family protein;protein_id=WP_003419780.1;transl_table=11 NZ_KK316829.1 RefSeq gene 195385 196938 . - . ID=gene-AL55_RS23495;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AL55_RS23495;old_locus_tag=AL55_03672 NZ_KK316829.1 Protein Homology CDS 195385 196938 . - 0 ID=cds-WP_003899643.1;Parent=gene-AL55_RS23495;Dbxref=GenBank:WP_003899643.1;Name=WP_003899643.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218213.1;locus_tag=AL55_RS23495;product=glycerol kinase GlpK;protein_id=WP_003899643.1;transl_table=11 NZ_KK316829.1 RefSeq gene 196988 197425 . - . ID=gene-AL55_RS23500;Name=AL55_RS23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23500;old_locus_tag=AL55_03673 NZ_KK316829.1 Protein Homology CDS 196988 197425 . - 0 ID=cds-WP_003899644.1;Parent=gene-AL55_RS23500;Dbxref=GenBank:WP_003899644.1;Name=WP_003899644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218214.1;locus_tag=AL55_RS23500;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003899644.1;transl_table=11 NZ_KK316829.1 RefSeq gene 197422 197646 . - . ID=gene-AL55_RS23505;Name=AL55_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23505;old_locus_tag=AL55_03674 NZ_KK316829.1 Protein Homology CDS 197422 197646 . - 0 ID=cds-WP_003419787.1;Parent=gene-AL55_RS23505;Dbxref=GenBank:WP_003419787.1;Name=WP_003419787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007412423.1;locus_tag=AL55_RS23505;product=antitoxin VapB48;protein_id=WP_003419787.1;transl_table=11 NZ_KK316829.1 RefSeq gene 197733 199205 . + . ID=gene-AL55_RS23510;Name=AL55_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23510;old_locus_tag=AL55_03675 NZ_KK316829.1 Protein Homology CDS 197733 199205 . + 0 ID=cds-WP_003419790.1;Parent=gene-AL55_RS23510;Dbxref=GenBank:WP_003419790.1;Name=WP_003419790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419790.1;locus_tag=AL55_RS23510;product=glutamate-cysteine ligase family protein;protein_id=WP_003419790.1;transl_table=11 NZ_KK316829.1 RefSeq gene 199227 199928 . + . ID=gene-AL55_RS23515;Name=AL55_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23515;old_locus_tag=AL55_03676 NZ_KK316829.1 Protein Homology CDS 199227 199928 . + 0 ID=cds-WP_003419793.1;Parent=gene-AL55_RS23515;Dbxref=GenBank:WP_003419793.1;Name=WP_003419793.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218216.1;locus_tag=AL55_RS23515;product=class I SAM-dependent methyltransferase;protein_id=WP_003419793.1;transl_table=11 NZ_KK316829.1 RefSeq gene 199931 201103 . - . ID=gene-AL55_RS23520;Name=egtE;gbkey=Gene;gene=egtE;gene_biotype=protein_coding;locus_tag=AL55_RS23520;old_locus_tag=AL55_03677 NZ_KK316829.1 Protein Homology CDS 199931 201103 . - 0 ID=cds-WP_003901701.1;Parent=gene-AL55_RS23520;Dbxref=GenBank:WP_003901701.1;Name=WP_003901701.1;Ontology_term=GO:0052699,GO:0016829;gbkey=CDS;gene=egtE;go_function=lyase activity|0016829||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218217.1;locus_tag=AL55_RS23520;product=ergothioneine biosynthesis PLP-dependent enzyme EgtE;protein_id=WP_003901701.1;transl_table=11 NZ_KK316829.1 RefSeq gene 201134 202099 . - . ID=gene-AL55_RS23525;Name=egtD;gbkey=Gene;gene=egtD;gene_biotype=protein_coding;locus_tag=AL55_RS23525;old_locus_tag=AL55_03678 NZ_KK316829.1 Protein Homology CDS 201134 202099 . - 0 ID=cds-WP_003419799.1;Parent=gene-AL55_RS23525;Dbxref=GenBank:WP_003419799.1;Name=WP_003419799.1;Ontology_term=GO:0052699,GO:0052706;gbkey=CDS;gene=egtD;go_function=L-histidine N(alpha)-methyltransferase activity|0052706||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218218.1;locus_tag=AL55_RS23525;product=L-histidine N(alpha)-methyltransferase;protein_id=WP_003419799.1;transl_table=11 NZ_KK316829.1 RefSeq gene 202096 202797 . - . ID=gene-AL55_RS23530;Name=egtC;gbkey=Gene;gene=egtC;gene_biotype=protein_coding;locus_tag=AL55_RS23530;old_locus_tag=AL55_03679 NZ_KK316829.1 Protein Homology CDS 202096 202797 . - 0 ID=cds-WP_003419806.1;Parent=gene-AL55_RS23530;Dbxref=GenBank:WP_003419806.1;Name=WP_003419806.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtC;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218219.1;locus_tag=AL55_RS23530;product=ergothioneine biosynthesis protein EgtC;protein_id=WP_003419806.1;transl_table=11 NZ_KK316829.1 RefSeq gene 202797 204074 . - . ID=gene-AL55_RS23535;Name=egtB;gbkey=Gene;gene=egtB;gene_biotype=protein_coding;locus_tag=AL55_RS23535;old_locus_tag=AL55_03680 NZ_KK316829.1 Protein Homology CDS 202797 204074 . - 0 ID=cds-WP_003419808.1;Parent=gene-AL55_RS23535;Dbxref=GenBank:WP_003419808.1;Name=WP_003419808.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtB;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218220.1;locus_tag=AL55_RS23535;product=ergothioneine biosynthesis protein EgtB;protein_id=WP_003419808.1;transl_table=11 NZ_KK316829.1 RefSeq gene 204071 205369 . - . ID=gene-AL55_RS23540;Name=egtA;gbkey=Gene;gene=egtA;gene_biotype=protein_coding;locus_tag=AL55_RS23540;old_locus_tag=AL55_03681 NZ_KK316829.1 Protein Homology CDS 204071 205369 . - 0 ID=cds-WP_003419809.1;Parent=gene-AL55_RS23540;Dbxref=GenBank:WP_003419809.1;Name=WP_003419809.1;Ontology_term=GO:0052699,GO:0004357;gbkey=CDS;gene=egtA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218221.1;locus_tag=AL55_RS23540;product=ergothioneine biosynthesis glutamate--cysteine ligase EgtA;protein_id=WP_003419809.1;transl_table=11 NZ_KK316829.1 RefSeq gene 205501 206145 . - . ID=gene-AL55_RS23545;Name=AL55_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23545;old_locus_tag=AL55_03682 NZ_KK316829.1 Protein Homology CDS 205501 206145 . - 0 ID=cds-WP_003419812.1;Parent=gene-AL55_RS23545;Dbxref=GenBank:WP_003419812.1;Name=WP_003419812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218222.1;locus_tag=AL55_RS23545;product=sensor domain-containing protein;protein_id=WP_003419812.1;transl_table=11 NZ_KK316829.1 RefSeq gene 206274 206663 . - . ID=gene-AL55_RS23550;Name=AL55_RS23550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23550;old_locus_tag=AL55_03683 NZ_KK316829.1 Protein Homology CDS 206274 206663 . - 0 ID=cds-WP_003419814.1;Parent=gene-AL55_RS23550;Dbxref=GenBank:WP_003419814.1;Name=WP_003419814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178006.1;locus_tag=AL55_RS23550;product=hypothetical protein;protein_id=WP_003419814.1;transl_table=11 NZ_KK316829.1 RefSeq gene 206774 207094 . - . ID=gene-AL55_RS23555;Name=AL55_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23555;old_locus_tag=AL55_03684 NZ_KK316829.1 Protein Homology CDS 206774 207094 . - 0 ID=cds-WP_003419816.1;Parent=gene-AL55_RS23555;Dbxref=GenBank:WP_003419816.1;Name=WP_003419816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218223.1;locus_tag=AL55_RS23555;product=hypothetical protein;protein_id=WP_003419816.1;transl_table=11 NZ_KK316829.1 RefSeq gene 207213 208361 . - . ID=gene-AL55_RS23560;Name=AL55_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23560;old_locus_tag=AL55_03685 NZ_KK316829.1 Protein Homology CDS 207213 208361 . - 0 ID=cds-WP_003899648.1;Parent=gene-AL55_RS23560;Dbxref=GenBank:WP_003899648.1;Name=WP_003899648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719265.1;locus_tag=AL55_RS23560;product=DUF4185 domain-containing protein;protein_id=WP_003899648.1;transl_table=11 NZ_KK316829.1 RefSeq gene 208363 209400 . - . ID=gene-AL55_RS23565;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AL55_RS23565;old_locus_tag=AL55_03686 NZ_KK316829.1 Protein Homology CDS 208363 209400 . - 0 ID=cds-WP_003419825.1;Parent=gene-AL55_RS23565;Dbxref=GenBank:WP_003419825.1;Name=WP_003419825.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218225.1;locus_tag=AL55_RS23565;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_003419825.1;transl_table=11 NZ_KK316829.1 RefSeq gene 209401 210666 . - . ID=gene-AL55_RS23570;Name=ask;gbkey=Gene;gene=ask;gene_biotype=protein_coding;locus_tag=AL55_RS23570;old_locus_tag=AL55_03687 NZ_KK316829.1 Protein Homology CDS 209401 210666 . - 0 ID=cds-WP_003419828.1;Parent=gene-AL55_RS23570;Dbxref=GenBank:WP_003419828.1;Name=WP_003419828.1;Ontology_term=GO:0008652,GO:0004072;gbkey=CDS;gene=ask;go_function=aspartate kinase activity|0004072||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218226.1;locus_tag=AL55_RS23570;product=aspartate kinase;protein_id=WP_003419828.1;transl_table=11 NZ_KK316829.1 RefSeq gene 210923 212857 . + . ID=gene-AL55_RS23575;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=AL55_RS23575;old_locus_tag=AL55_03688 NZ_KK316829.1 Protein Homology CDS 210923 212857 . + 0 ID=cds-WP_003902547.1;Parent=gene-AL55_RS23575;Dbxref=GenBank:WP_003902547.1;Name=WP_003902547.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218227.3;locus_tag=AL55_RS23575;product=2-isopropylmalate synthase;protein_id=WP_003902547.1;transl_table=11 NZ_KK316829.1 RefSeq gene 212923 213912 . - . ID=gene-AL55_RS23580;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AL55_RS23580;old_locus_tag=AL55_03689 NZ_KK316829.1 Protein Homology CDS 212923 213912 . - 0 ID=cds-WP_003901704.1;Parent=gene-AL55_RS23580;Dbxref=GenBank:WP_003901704.1;Name=WP_003901704.1;Ontology_term=GO:0006260,GO:0003677;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218228.1;locus_tag=AL55_RS23580;product=DEDDh family exonuclease;protein_id=WP_003901704.1;transl_table=11 NZ_KK316829.1 RefSeq gene 214223 215464 . + . ID=gene-AL55_RS23585;Name=AL55_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23585;old_locus_tag=AL55_03690 NZ_KK316829.1 Protein Homology CDS 214223 215464 . + 0 ID=cds-WP_003900738.1;Parent=gene-AL55_RS23585;Dbxref=GenBank:WP_003900738.1;Name=WP_003900738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218229.1;locus_tag=AL55_RS23585;product=Mur ligase family protein;protein_id=WP_003900738.1;transl_table=11 NZ_KK316829.1 RefSeq gene 215469 216164 . + . ID=gene-AL55_RS23590;Name=AL55_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23590;old_locus_tag=AL55_03691 NZ_KK316829.1 Protein Homology CDS 215469 216164 . + 0 ID=cds-WP_003900739.1;Parent=gene-AL55_RS23590;Dbxref=GenBank:WP_003900739.1;Name=WP_003900739.1;Ontology_term=GO:0004359;gbkey=CDS;go_function=glutaminase activity|0004359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218230.1;locus_tag=AL55_RS23590;product=type 1 glutamine amidotransferase;protein_id=WP_003900739.1;transl_table=11 NZ_KK316829.1 RefSeq gene 216173 217063 . - . ID=gene-AL55_RS23595;Name=AL55_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23595;old_locus_tag=AL55_03692 NZ_KK316829.1 Protein Homology CDS 216173 217063 . - 0 ID=cds-WP_003420405.1;Parent=gene-AL55_RS23595;Dbxref=GenBank:WP_003420405.1;Name=WP_003420405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218231.1;locus_tag=AL55_RS23595;product=hypothetical protein;protein_id=WP_003420405.1;transl_table=11 NZ_KK316829.1 RefSeq gene 217131 217742 . - . ID=gene-AL55_RS23600;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AL55_RS23600;old_locus_tag=AL55_03693 NZ_KK316829.1 Protein Homology CDS 217131 217742 . - 0 ID=cds-WP_003906193.1;Parent=gene-AL55_RS23600;Dbxref=GenBank:WP_003906193.1;Name=WP_003906193.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218232.1;locus_tag=AL55_RS23600;product=recombination mediator RecR;protein_id=WP_003906193.1;transl_table=11 NZ_KK316829.1 RefSeq gene 217754 218155 . - . ID=gene-AL55_RS23605;Name=AL55_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23605;old_locus_tag=AL55_03694 NZ_KK316829.1 Protein Homology CDS 217754 218155 . - 0 ID=cds-WP_003420408.1;Parent=gene-AL55_RS23605;Dbxref=GenBank:WP_003420408.1;Name=WP_003420408.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218233.1;locus_tag=AL55_RS23605;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_003420408.1;transl_table=11 NZ_KK316829.1 RefSeq gene 218254 219015 . + . ID=gene-AL55_RS23610;Name=AL55_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23610;old_locus_tag=AL55_03695 NZ_KK316829.1 Protein Homology CDS 218254 219015 . + 0 ID=cds-WP_003912326.1;Parent=gene-AL55_RS23610;Dbxref=GenBank:WP_003912326.1;Name=WP_003912326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912326.1;locus_tag=AL55_RS23610;product=Rv3717 family N-acetylmuramoyl-L-alanine amidase;protein_id=WP_003912326.1;transl_table=11 NZ_KK316829.1 RefSeq gene 219057 219500 . - . ID=gene-AL55_RS23615;Name=AL55_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23615;old_locus_tag=AL55_03696 NZ_KK316829.1 Protein Homology CDS 219057 219500 . - 0 ID=cds-WP_003899651.1;Parent=gene-AL55_RS23615;Dbxref=GenBank:WP_003899651.1;Name=WP_003899651.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218235.1;locus_tag=AL55_RS23615;product=SRPBCC family protein;protein_id=WP_003899651.1;transl_table=11 NZ_KK316829.1 RefSeq gene 219548 220960 . + . ID=gene-AL55_RS23620;Name=AL55_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23620;old_locus_tag=AL55_03697 NZ_KK316829.1 Protein Homology CDS 219548 220960 . + 0 ID=cds-WP_003420413.1;Parent=gene-AL55_RS23620;Dbxref=GenBank:WP_003420413.1;Name=WP_003420413.1;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013128575.1;locus_tag=AL55_RS23620;product=FAD-binding oxidoreductase;protein_id=WP_003420413.1;transl_table=11 NZ_KK316829.1 RefSeq gene 220957 222240 . + . ID=gene-AL55_RS23625;Name=AL55_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23625;old_locus_tag=AL55_03698 NZ_KK316829.1 Protein Homology CDS 220957 222240 . + 0 ID=cds-WP_003899652.1;Parent=gene-AL55_RS23625;Dbxref=GenBank:WP_003899652.1;Name=WP_003899652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899652.1;locus_tag=AL55_RS23625;product=class I SAM-dependent methyltransferase;protein_id=WP_003899652.1;transl_table=11 NZ_KK316829.1 RefSeq gene 222237 223973 . - . ID=gene-AL55_RS23630;Name=dnaZX;gbkey=Gene;gene=dnaZX;gene_biotype=protein_coding;locus_tag=AL55_RS23630;old_locus_tag=AL55_03699 NZ_KK316829.1 Protein Homology CDS 222237 223973 . - 0 ID=cds-WP_003420417.1;Parent=gene-AL55_RS23630;Dbxref=GenBank:WP_003420417.1;Name=WP_003420417.1;gbkey=CDS;gene=dnaZX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218238.1;locus_tag=AL55_RS23630;product=DNA polymerase III subunits gamma/tau;protein_id=WP_003420417.1;transl_table=11 NZ_KK316829.1 RefSeq gene 224063 225370 . - . ID=gene-AL55_RS23635;Name=AL55_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23635;old_locus_tag=AL55_03700 NZ_KK316829.1 Protein Homology CDS 224063 225370 . - 0 ID=cds-WP_003901708.1;Parent=gene-AL55_RS23635;Dbxref=GenBank:WP_003901708.1;Name=WP_003901708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218239.2;locus_tag=AL55_RS23635;product=aspartate aminotransferase type Ic;protein_id=WP_003901708.1;transl_table=11 NZ_KK316829.1 RefSeq gene 225432 225526 . - . ID=gene-AL55_RS26650;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=AL55_RS26650 NZ_KK316829.1 cmsearch SRP_RNA 225432 225526 . - . ID=rna-AL55_RS26650;Parent=gene-AL55_RS26650;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL55_RS26650;product=signal recognition particle sRNA small type NZ_KK316829.1 cmsearch exon 225432 225526 . - . ID=exon-AL55_RS26650-1;Parent=rna-AL55_RS26650;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL55_RS26650;product=signal recognition particle sRNA small type NZ_KK316829.1 RefSeq gene 225587 225675 . + . ID=gene-AL55_RS23640;Name=AL55_RS23640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS23640;old_locus_tag=AL55_03701 NZ_KK316829.1 tRNAscan-SE tRNA 225587 225675 . + . ID=rna-AL55_RS23640;Parent=gene-AL55_RS23640;anticodon=(pos:225621..225623);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS23640;product=tRNA-Ser NZ_KK316829.1 tRNAscan-SE exon 225587 225675 . + . ID=exon-AL55_RS23640-1;Parent=rna-AL55_RS23640;anticodon=(pos:225621..225623);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS23640;product=tRNA-Ser NZ_KK316829.1 RefSeq gene 225778 226542 . + . ID=gene-AL55_RS23645;Name=lucA;gbkey=Gene;gene=lucA;gene_biotype=protein_coding;locus_tag=AL55_RS23645;old_locus_tag=AL55_03702 NZ_KK316829.1 Protein Homology CDS 225778 226542 . + 0 ID=cds-WP_003420421.1;Parent=gene-AL55_RS23645;Dbxref=GenBank:WP_003420421.1;Name=WP_003420421.1;gbkey=CDS;gene=lucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218240.1;locus_tag=AL55_RS23645;product=lipid uptake coordinator LucA;protein_id=WP_003420421.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 226709 227411 . + . ID=gene-AL55_RS23650;Name=AL55_RS23650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS23650;old_locus_tag=AL55_03704;pseudo=true NZ_KK316829.1 Protein Homology CDS 226709 227411 . + 0 ID=cds-AL55_RS23650;Parent=gene-AL55_RS23650;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420425.1;locus_tag=AL55_RS23650;product=cutinase family protein;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq gene 227471 228457 . + . ID=gene-AL55_RS0105640;Name=AL55_RS0105640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105640;old_locus_tag=AL55_03705 NZ_KK316829.1 Protein Homology CDS 227471 228457 . + 0 ID=cds-WP_015575361.1;Parent=gene-AL55_RS0105640;Dbxref=GenBank:WP_015575361.1;Name=WP_015575361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015575361.1;locus_tag=AL55_RS0105640;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_015575361.1;transl_table=11 NZ_KK316829.1 RefSeq gene 228454 228600 . - . ID=gene-AL55_RS27410;Name=AL55_RS27410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27410 NZ_KK316829.1 Protein Homology CDS 228454 228600 . - 0 ID=cds-WP_003420429.1;Parent=gene-AL55_RS27410;Dbxref=GenBank:WP_003420429.1;Name=WP_003420429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913883.1;locus_tag=AL55_RS27410;product=hypothetical protein;protein_id=WP_003420429.1;transl_table=11 NZ_KK316829.1 RefSeq gene 228664 229857 . + . ID=gene-AL55_RS23655;Name=AL55_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23655;old_locus_tag=AL55_03706 NZ_KK316829.1 Protein Homology CDS 228664 229857 . + 0 ID=cds-WP_003900742.1;Parent=gene-AL55_RS23655;Dbxref=GenBank:WP_003900742.1;Name=WP_003900742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218243.1;locus_tag=AL55_RS23655;product=zinc-binding dehydrogenase;protein_id=WP_003900742.1;transl_table=11 NZ_KK316829.1 RefSeq gene 230198 232006 . + . ID=gene-AL55_RS23660;Name=AL55_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23660;old_locus_tag=AL55_03707 NZ_KK316829.1 Protein Homology CDS 230198 232006 . + 0 ID=cds-WP_003901712.1;Parent=gene-AL55_RS23660;Dbxref=GenBank:WP_003901712.1;Name=WP_003901712.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218244.1;locus_tag=AL55_RS23660;product=hydroxysqualene dehydroxylase;protein_id=WP_003901712.1;transl_table=11 NZ_KK316829.1 RefSeq gene 232116 235313 . + . ID=gene-AL55_RS23665;Name=AL55_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23665;old_locus_tag=AL55_03708 NZ_KK316829.1 Protein Homology CDS 232116 235313 . + 0 ID=cds-WP_003900743.1;Parent=gene-AL55_RS23665;Dbxref=GenBank:WP_003900743.1;Name=WP_003900743.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218245.1;locus_tag=AL55_RS23665;product=MFS transporter;protein_id=WP_003900743.1;transl_table=11 NZ_KK316829.1 RefSeq gene 235492 237858 . + . ID=gene-AL55_RS23670;Name=AL55_RS23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23670;old_locus_tag=AL55_03709 NZ_KK316829.1 Protein Homology CDS 235492 237858 . + 0 ID=cds-WP_003917950.1;Parent=gene-AL55_RS23670;Dbxref=GenBank:WP_003917950.1;Name=WP_003917950.1;Ontology_term=GO:0003824,GO:0051539;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899656.1;locus_tag=AL55_RS23670;product=radical SAM protein;protein_id=WP_003917950.1;transl_table=11 NZ_KK316829.1 RefSeq gene 237923 238963 . - . ID=gene-AL55_RS23675;Name=ligD;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=AL55_RS23675;old_locus_tag=AL55_03710 NZ_KK316829.1 Protein Homology CDS 237923 238963 . - 0 ID=cds-WP_003899657.1;Parent=gene-AL55_RS23675;Dbxref=GenBank:WP_003899657.1;Name=WP_003899657.1;gbkey=CDS;gene=ligD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218247.1;locus_tag=AL55_RS23675;product=non-homologous end-joining DNA ligase;protein_id=WP_003899657.1;transl_table=11 NZ_KK316829.1 RefSeq gene 239001 240077 . + . ID=gene-AL55_RS23680;Name=ligC;gbkey=Gene;gene=ligC;gene_biotype=protein_coding;locus_tag=AL55_RS23680;old_locus_tag=AL55_03711 NZ_KK316829.1 Protein Homology CDS 239001 240077 . + 0 ID=cds-WP_003420435.1;Parent=gene-AL55_RS23680;Dbxref=GenBank:WP_003420435.1;Name=WP_003420435.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910,GO:0005524;gbkey=CDS;gene=ligC;go_function=DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218248.1;locus_tag=AL55_RS23680;product=ATP-dependent DNA ligase;protein_id=WP_003420435.1;transl_table=11 NZ_KK316829.1 RefSeq gene 240177 241235 . + . ID=gene-AL55_RS23685;Name=AL55_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23685;old_locus_tag=AL55_03712 NZ_KK316829.1 Protein Homology CDS 240177 241235 . + 0 ID=cds-WP_003420436.1;Parent=gene-AL55_RS23685;Dbxref=GenBank:WP_003420436.1;Name=WP_003420436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218249.1;locus_tag=AL55_RS23685;product=DUF2330 domain-containing protein;protein_id=WP_003420436.1;transl_table=11 NZ_KK316829.1 RefSeq gene 241255 241755 . - . ID=gene-AL55_RS23690;Name=AL55_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23690;old_locus_tag=AL55_03713 NZ_KK316829.1 Protein Homology CDS 241255 241755 . - 0 ID=cds-WP_003420437.1;Parent=gene-AL55_RS23690;Dbxref=GenBank:WP_003420437.1;Name=WP_003420437.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218250.1;locus_tag=AL55_RS23690;product=NUDIX hydrolase;protein_id=WP_003420437.1;transl_table=11 NZ_KK316829.1 RefSeq gene 241769 243133 . - . ID=gene-AL55_RS23695;Name=AL55_RS23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23695;old_locus_tag=AL55_03714 NZ_KK316829.1 Protein Homology CDS 241769 243133 . - 0 ID=cds-WP_003420440.1;Parent=gene-AL55_RS23695;Dbxref=GenBank:WP_003420440.1;Name=WP_003420440.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218251.1;locus_tag=AL55_RS23695;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003420440.1;transl_table=11 NZ_KK316829.1 RefSeq gene 243332 243820 . + . ID=gene-AL55_RS23700;Name=AL55_RS23700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23700;old_locus_tag=AL55_03715 NZ_KK316829.1 Protein Homology CDS 243332 243820 . + 0 ID=cds-WP_003899658.1;Parent=gene-AL55_RS23700;Dbxref=GenBank:WP_003899658.1;Name=WP_003899658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218252.1;locus_tag=AL55_RS23700;product=adenosine-specific kinase;protein_id=WP_003899658.1;transl_table=11 NZ_KK316829.1 RefSeq gene 243877 244938 . + . ID=gene-AL55_RS23705;Name=AL55_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23705;old_locus_tag=AL55_03716 NZ_KK316829.1 Protein Homology CDS 243877 244938 . + 0 ID=cds-WP_003899659.1;Parent=gene-AL55_RS23705;Dbxref=GenBank:WP_003899659.1;Name=WP_003899659.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218253.1;locus_tag=AL55_RS23705;product=AraC family transcriptional regulator;protein_id=WP_003899659.1;transl_table=11 NZ_KK316829.1 RefSeq gene 244942 246531 . + . ID=gene-AL55_RS23710;Name=AL55_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23710;old_locus_tag=AL55_03717 NZ_KK316829.1 Protein Homology CDS 244942 246531 . + 0 ID=cds-WP_003899660.1;Parent=gene-AL55_RS23710;Dbxref=GenBank:WP_003899660.1;Name=WP_003899660.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218254.1;locus_tag=AL55_RS23710;product=threonine/serine exporter family protein;protein_id=WP_003899660.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 246528 247760 . - . ID=gene-AL55_RS23715;Name=AL55_RS23715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS23715;old_locus_tag=AL55_03718;pseudo=true NZ_KK316829.1 Protein Homology CDS 246528 247760 . - 0 ID=cds-AL55_RS23715;Parent=gene-AL55_RS23715;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909072.1;locus_tag=AL55_RS23715;product=PPE family protein;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq gene 248076 249422 . - . ID=gene-AL55_RS23725;Name=AL55_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23725;old_locus_tag=AL55_03720 NZ_KK316829.1 Protein Homology CDS 248076 249422 . - 0 ID=cds-WP_003900746.1;Parent=gene-AL55_RS23725;Dbxref=GenBank:WP_003900746.1;Name=WP_003900746.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218257.1;locus_tag=AL55_RS23725;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003900746.1;transl_table=11 NZ_KK316829.1 RefSeq gene 249422 250096 . - . ID=gene-AL55_RS28295;Name=AL55_RS28295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28295;old_locus_tag=AL55_03721 NZ_KK316829.1 GeneMarkS-2+ CDS 249422 250096 . - 0 ID=cds-WP_003900747.1;Parent=gene-AL55_RS28295;Dbxref=GenBank:WP_003900747.1;Name=WP_003900747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS28295;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003900747.1;transl_table=11 NZ_KK316829.1 RefSeq gene 250093 250608 . - . ID=gene-AL55_RS28300;Name=AL55_RS28300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28300;old_locus_tag=AL55_03722 NZ_KK316829.1 GeneMarkS-2+ CDS 250093 250608 . - 0 ID=cds-WP_369810406.1;Parent=gene-AL55_RS28300;Dbxref=GenBank:WP_369810406.1;Name=WP_369810406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS28300;product=hypothetical protein;protein_id=WP_369810406.1;transl_table=11 NZ_KK316829.1 RefSeq gene 250634 252616 . - . ID=gene-AL55_RS23740;Name=ctpJ;gbkey=Gene;gene=ctpJ;gene_biotype=protein_coding;locus_tag=AL55_RS23740;old_locus_tag=AL55_03723 NZ_KK316829.1 Protein Homology CDS 250634 252616 . - 0 ID=cds-WP_003899665.1;Parent=gene-AL55_RS23740;Dbxref=GenBank:WP_003899665.1;Name=WP_003899665.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872;gbkey=CDS;gene=ctpJ;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218260.1;locus_tag=AL55_RS23740;product=heavy metal translocating P-type ATPase;protein_id=WP_003899665.1;transl_table=11 NZ_KK316829.1 RefSeq gene 252683 253045 . + . ID=gene-AL55_RS23745;Name=nmtR;gbkey=Gene;gene=nmtR;gene_biotype=protein_coding;locus_tag=AL55_RS23745;old_locus_tag=AL55_03724 NZ_KK316829.1 Protein Homology CDS 252683 253045 . + 0 ID=cds-WP_003901716.1;Parent=gene-AL55_RS23745;Dbxref=GenBank:WP_003901716.1;Name=WP_003901716.1;gbkey=CDS;gene=nmtR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218261.1;locus_tag=AL55_RS23745;product=Ni(II)/Co(II)-sensing metalloregulatory transcriptional repressor NmtR;protein_id=WP_003901716.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 253150 253341 . - . ID=gene-AL55_RS23750;Name=AL55_RS23750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS23750;old_locus_tag=AL55_03725;partial=true;pseudo=true;start_range=.,253150 NZ_KK316829.1 Protein Homology CDS 253150 253341 . - 0 ID=cds-AL55_RS23750;Parent=gene-AL55_RS23750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019930003.1;locus_tag=AL55_RS23750;partial=true;product=DUF2237 family protein;pseudo=true;start_range=.,253150;transl_table=11 NZ_KK316829.1 RefSeq gene 253414 253749 . - . ID=gene-AL55_RS23755;Name=AL55_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23755;old_locus_tag=AL55_03726 NZ_KK316829.1 Protein Homology CDS 253414 253749 . - 0 ID=cds-WP_003899670.1;Parent=gene-AL55_RS23755;Dbxref=GenBank:WP_003899670.1;Name=WP_003899670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178011.1;locus_tag=AL55_RS23755;product=PE domain-containing protein;protein_id=WP_003899670.1;transl_table=11 NZ_KK316829.1 RefSeq gene 253967 254350 . + . ID=gene-AL55_RS23760;Name=AL55_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23760;old_locus_tag=AL55_03727 NZ_KK316829.1 Protein Homology CDS 253967 254350 . + 0 ID=cds-WP_003899671.1;Parent=gene-AL55_RS23760;Dbxref=GenBank:WP_003899671.1;Name=WP_003899671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218264.1;locus_tag=AL55_RS23760;product=hypothetical protein;protein_id=WP_003899671.1;transl_table=11 NZ_KK316829.1 RefSeq gene 254480 254839 . + . ID=gene-AL55_RS23765;Name=AL55_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23765;old_locus_tag=AL55_03728 NZ_KK316829.1 Protein Homology CDS 254480 254839 . + 0 ID=cds-WP_003899672.1;Parent=gene-AL55_RS23765;Dbxref=GenBank:WP_003899672.1;Name=WP_003899672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218265.1;locus_tag=AL55_RS23765;product=hypothetical protein;protein_id=WP_003899672.1;transl_table=11 NZ_KK316829.1 RefSeq gene 254872 255222 . - . ID=gene-AL55_RS0105650;Name=AL55_RS0105650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105650;old_locus_tag=AL55_03729 NZ_KK316829.1 GeneMarkS-2+ CDS 254872 255222 . - 0 ID=cds-WP_003917953.1;Parent=gene-AL55_RS0105650;Dbxref=GenBank:WP_003917953.1;Name=WP_003917953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS0105650;product=VapC50 family PIN domain-containing toxin;protein_id=WP_003917953.1;transl_table=11 NZ_KK316829.1 RefSeq gene 255449 255895 . - . ID=gene-AL55_RS23770;Name=AL55_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23770;old_locus_tag=AL55_03731 NZ_KK316829.1 Protein Homology CDS 255449 255895 . - 0 ID=cds-WP_016719233.1;Parent=gene-AL55_RS23770;Dbxref=GenBank:WP_016719233.1;Name=WP_016719233.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719233.1;locus_tag=AL55_RS23770;product=helix-turn-helix domain-containing protein;protein_id=WP_016719233.1;transl_table=11 NZ_KK316829.1 RefSeq gene 256117 256332 . + . ID=gene-AL55_RS23775;Name=AL55_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23775;old_locus_tag=AL55_03732 NZ_KK316829.1 Protein Homology CDS 256117 256332 . + 0 ID=cds-WP_003899674.1;Parent=gene-AL55_RS23775;Dbxref=GenBank:WP_003899674.1;Name=WP_003899674.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294640.1;locus_tag=AL55_RS23775;product=tyrosine-type recombinase/integrase;protein_id=WP_003899674.1;transl_table=11 NZ_KK316829.1 RefSeq gene 256371 256460 . - . ID=gene-AL55_RS23780;Name=AL55_RS23780;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS23780;old_locus_tag=AL55_03733 NZ_KK316829.1 tRNAscan-SE tRNA 256371 256460 . - . ID=rna-AL55_RS23780;Parent=gene-AL55_RS23780;anticodon=(pos:complement(256424..256426));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS23780;product=tRNA-Ser NZ_KK316829.1 tRNAscan-SE exon 256371 256460 . - . ID=exon-AL55_RS23780-1;Parent=rna-AL55_RS23780;anticodon=(pos:complement(256424..256426));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS23780;product=tRNA-Ser NZ_KK316829.1 RefSeq gene 256490 256948 . - . ID=gene-AL55_RS23785;Name=AL55_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23785;old_locus_tag=AL55_03734 NZ_KK316829.1 Protein Homology CDS 256490 256948 . - 0 ID=cds-WP_003420508.1;Parent=gene-AL55_RS23785;Dbxref=GenBank:WP_003420508.1;Name=WP_003420508.1;Ontology_term=GO:0009116,GO:0008270,GO:0019239;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,deaminase activity|0019239||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218269.1;locus_tag=AL55_RS23785;product=nucleoside deaminase;protein_id=WP_003420508.1;transl_table=11 NZ_KK316829.1 RefSeq gene 256964 257485 . - . ID=gene-AL55_RS23790;Name=AL55_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23790;old_locus_tag=AL55_03735 NZ_KK316829.1 Protein Homology CDS 256964 257485 . - 0 ID=cds-WP_003899676.1;Parent=gene-AL55_RS23790;Dbxref=GenBank:WP_003899676.1;Name=WP_003899676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899676.1;locus_tag=AL55_RS23790;product=tRNA adenosine deaminase-associated protein;protein_id=WP_003899676.1;transl_table=11 NZ_KK316829.1 RefSeq gene 257625 258569 . + . ID=gene-AL55_RS23795;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=AL55_RS23795;old_locus_tag=AL55_03736 NZ_KK316829.1 Protein Homology CDS 257625 258569 . + 0 ID=cds-WP_003912273.1;Parent=gene-AL55_RS23795;Dbxref=GenBank:WP_003912273.1;Name=WP_003912273.1;Ontology_term=GO:0006571,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351229.1;locus_tag=AL55_RS23795;product=prephenate dehydrogenase;protein_id=WP_003912273.1;transl_table=11 NZ_KK316829.1 RefSeq gene 258532 259131 . - . ID=gene-AL55_RS23800;Name=AL55_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23800;old_locus_tag=AL55_03737 NZ_KK316829.1 Protein Homology CDS 258532 259131 . - 0 ID=cds-WP_003420517.1;Parent=gene-AL55_RS23800;Dbxref=GenBank:WP_003420517.1;Name=WP_003420517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218272.1;locus_tag=AL55_RS23800;product=putative glycolipid-binding domain-containing protein;protein_id=WP_003420517.1;transl_table=11 NZ_KK316829.1 RefSeq gene 259137 259856 . - . ID=gene-AL55_RS23805;Name=proZ;gbkey=Gene;gene=proZ;gene_biotype=protein_coding;locus_tag=AL55_RS23805;old_locus_tag=AL55_03738 NZ_KK316829.1 Protein Homology CDS 259137 259856 . - 0 ID=cds-WP_003420520.1;Parent=gene-AL55_RS23805;Dbxref=GenBank:WP_003420520.1;Name=WP_003420520.1;gbkey=CDS;gene=proZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218273.1;locus_tag=AL55_RS23805;product=glycine betaine/carnitine/choline/L-proline ABC transporter permease ProZ;protein_id=WP_003420520.1;transl_table=11 NZ_KK316829.1 RefSeq gene 259853 260542 . - . ID=gene-AL55_RS23810;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=AL55_RS23810;old_locus_tag=AL55_03739 NZ_KK316829.1 Protein Homology CDS 259853 260542 . - 0 ID=cds-WP_003420526.1;Parent=gene-AL55_RS23810;Dbxref=GenBank:WP_003420526.1;Name=WP_003420526.1;gbkey=CDS;gene=proW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218274.1;locus_tag=AL55_RS23810;product=glycine betaine/carnitine/choline/L-proline ABC transporter permease ProW;protein_id=WP_003420526.1;transl_table=11 NZ_KK316829.1 RefSeq gene 260530 261660 . - . ID=gene-AL55_RS23815;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=AL55_RS23815;old_locus_tag=AL55_03740 NZ_KK316829.1 Protein Homology CDS 260530 261660 . - 0 ID=cds-WP_003906205.1;Parent=gene-AL55_RS23815;Dbxref=GenBank:WP_003906205.1;Name=WP_003906205.1;gbkey=CDS;gene=proV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218275.1;locus_tag=AL55_RS23815;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_003906205.1;transl_table=11 NZ_KK316829.1 RefSeq gene 261669 262616 . - . ID=gene-AL55_RS23820;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=AL55_RS23820;old_locus_tag=AL55_03741 NZ_KK316829.1 Protein Homology CDS 261669 262616 . - 0 ID=cds-WP_003901718.1;Parent=gene-AL55_RS23820;Dbxref=GenBank:WP_003901718.1;Name=WP_003901718.1;gbkey=CDS;gene=proX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218276.1;locus_tag=AL55_RS23820;product=glycine betaine/carnitine/choline/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_003901718.1;transl_table=11 NZ_KK316829.1 RefSeq gene 262730 263083 . + . ID=gene-AL55_RS23825;Name=AL55_RS23825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23825;old_locus_tag=AL55_03742 NZ_KK316829.1 Protein Homology CDS 262730 263083 . + 0 ID=cds-WP_003899680.1;Parent=gene-AL55_RS23825;Dbxref=GenBank:WP_003899680.1;Name=WP_003899680.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899680.1;locus_tag=AL55_RS23825;product=LapA family protein;protein_id=WP_003899680.1;transl_table=11 NZ_KK316829.1 RefSeq gene 263105 264160 . - . ID=gene-AL55_RS23830;Name=AL55_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23830;old_locus_tag=AL55_03743 NZ_KK316829.1 Protein Homology CDS 263105 264160 . - 0 ID=cds-WP_003420539.1;Parent=gene-AL55_RS23830;Dbxref=GenBank:WP_003420539.1;Name=WP_003420539.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218278.1;locus_tag=AL55_RS23830;product=phosphotransferase family protein;protein_id=WP_003420539.1;transl_table=11 NZ_KK316829.1 RefSeq gene 264239 266119 . - . ID=gene-AL55_RS23835;Name=AL55_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23835;old_locus_tag=AL55_03744 NZ_KK316829.1 Protein Homology CDS 264239 266119 . - 0 ID=cds-WP_003900750.1;Parent=gene-AL55_RS23835;Dbxref=GenBank:WP_003900750.1;Name=WP_003900750.1;Ontology_term=GO:0008484,GO:0046872,GO:0046983;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218279.1;locus_tag=AL55_RS23835;product=alkyl/aryl-sulfatase;protein_id=WP_003900750.1;transl_table=11 NZ_KK316829.1 RefSeq gene 266290 266769 . + . ID=gene-AL55_RS23840;Name=lpqH;gbkey=Gene;gene=lpqH;gene_biotype=protein_coding;locus_tag=AL55_RS23840;old_locus_tag=AL55_03745 NZ_KK316829.1 Protein Homology CDS 266290 266769 . + 0 ID=cds-WP_003420544.1;Parent=gene-AL55_RS23840;Dbxref=GenBank:WP_003420544.1;Name=WP_003420544.1;gbkey=CDS;gene=lpqH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218280.1;locus_tag=AL55_RS23840;product=lipoprotein LpqH;protein_id=WP_003420544.1;transl_table=11 NZ_KK316829.1 RefSeq gene 266825 268345 . - . ID=gene-AL55_RS23845;Name=tcrY;gbkey=Gene;gene=tcrY;gene_biotype=protein_coding;locus_tag=AL55_RS23845;old_locus_tag=AL55_03746 NZ_KK316829.1 Protein Homology CDS 266825 268345 . - 0 ID=cds-WP_003899682.1;Parent=gene-AL55_RS23845;Dbxref=GenBank:WP_003899682.1;Name=WP_003899682.1;gbkey=CDS;gene=tcrY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899682.1;locus_tag=AL55_RS23845;product=two-component system sensor histidine kinase TcrY;protein_id=WP_003899682.1;transl_table=11 NZ_KK316829.1 RefSeq gene 268323 269027 . - . ID=gene-AL55_RS23850;Name=tcrX;gbkey=Gene;gene=tcrX;gene_biotype=protein_coding;locus_tag=AL55_RS23850;old_locus_tag=AL55_03747 NZ_KK316829.1 Protein Homology CDS 268323 269027 . - 0 ID=cds-WP_003420552.1;Parent=gene-AL55_RS23850;Dbxref=GenBank:WP_003420552.1;Name=WP_003420552.1;gbkey=CDS;gene=tcrX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218282.1;locus_tag=AL55_RS23850;product=two-component system response regulator TcrX;protein_id=WP_003420552.1;transl_table=11 NZ_KK316829.1 RefSeq gene 269401 270222 . + . ID=gene-AL55_RS23855;Name=AL55_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23855;old_locus_tag=AL55_03748 NZ_KK316829.1 Protein Homology CDS 269401 270222 . + 0 ID=cds-WP_003917955.1;Parent=gene-AL55_RS23855;Dbxref=GenBank:WP_003917955.1;Name=WP_003917955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912342.1;locus_tag=AL55_RS23855;product=glycoside hydrolase family 25 domain-containing protein;protein_id=WP_003917955.1;transl_table=11 NZ_KK316829.1 RefSeq gene 270236 271180 . - . ID=gene-AL55_RS23860;Name=AL55_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23860;old_locus_tag=AL55_03749 NZ_KK316829.1 Protein Homology CDS 270236 271180 . - 0 ID=cds-WP_003420557.1;Parent=gene-AL55_RS23860;Dbxref=GenBank:WP_003420557.1;Name=WP_003420557.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218284.1;locus_tag=AL55_RS23860;product=class I SAM-dependent methyltransferase;protein_id=WP_003420557.1;transl_table=11 NZ_KK316829.1 RefSeq gene 271310 271669 . + . ID=gene-AL55_RS23865;Name=AL55_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23865;old_locus_tag=AL55_03750 NZ_KK316829.1 Protein Homology CDS 271310 271669 . + 0 ID=cds-WP_003420560.1;Parent=gene-AL55_RS23865;Dbxref=GenBank:WP_003420560.1;Name=WP_003420560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218285.1;locus_tag=AL55_RS23865;product=nuclear transport factor 2 family protein;protein_id=WP_003420560.1;transl_table=11 NZ_KK316829.1 RefSeq gene 271855 272127 . + . ID=gene-AL55_RS23870;Name=AL55_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23870;old_locus_tag=AL55_03751 NZ_KK316829.1 Protein Homology CDS 271855 272127 . + 0 ID=cds-WP_003420563.1;Parent=gene-AL55_RS23870;Dbxref=GenBank:WP_003420563.1;Name=WP_003420563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218286.1;locus_tag=AL55_RS23870;product=hypothetical protein;protein_id=WP_003420563.1;transl_table=11 NZ_KK316829.1 RefSeq gene 272440 273015 . - . ID=gene-AL55_RS23875;Name=AL55_RS23875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23875;old_locus_tag=AL55_03752 NZ_KK316829.1 Protein Homology CDS 272440 273015 . - 0 ID=cds-WP_003420565.1;Parent=gene-AL55_RS23875;Dbxref=GenBank:WP_003420565.1;Name=WP_003420565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218287.1;locus_tag=AL55_RS23875;product=hypothetical protein;protein_id=WP_003420565.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 273160 273535 . - . ID=gene-AL55_RS26660;Name=AL55_RS26660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS26660;partial=true;pseudo=true;start_range=.,273160 NZ_KK316829.1 Protein Homology CDS 273160 273535 . - 0 ID=cds-AL55_RS26660;Parent=gene-AL55_RS26660;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217328.1;locus_tag=AL55_RS26660;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,273160;transl_table=11 NZ_KK316829.1 RefSeq gene 273644 273970 . - . ID=gene-AL55_RS23890;Name=AL55_RS23890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23890;old_locus_tag=AL55_03755 NZ_KK316829.1 Protein Homology CDS 273644 273970 . - 0 ID=cds-WP_003420573.1;Parent=gene-AL55_RS23890;Dbxref=GenBank:WP_003420573.1;Name=WP_003420573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218288.1;locus_tag=AL55_RS23890;product=hypothetical protein;protein_id=WP_003420573.1;transl_table=11 NZ_KK316829.1 RefSeq gene 274105 274177 . - . ID=gene-AL55_RS23895;Name=AL55_RS23895;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS23895;old_locus_tag=AL55_03756 NZ_KK316829.1 tRNAscan-SE tRNA 274105 274177 . - . ID=rna-AL55_RS23895;Parent=gene-AL55_RS23895;anticodon=(pos:complement(274142..274144));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS23895;product=tRNA-Arg NZ_KK316829.1 tRNAscan-SE exon 274105 274177 . - . ID=exon-AL55_RS23895-1;Parent=rna-AL55_RS23895;anticodon=(pos:complement(274142..274144));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS23895;product=tRNA-Arg NZ_KK316829.1 RefSeq gene 274208 274296 . - . ID=gene-AL55_RS23900;Name=AL55_RS23900;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS23900;old_locus_tag=AL55_03757 NZ_KK316829.1 tRNAscan-SE tRNA 274208 274296 . - . ID=rna-AL55_RS23900;Parent=gene-AL55_RS23900;anticodon=(pos:complement(274260..274262));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS23900;product=tRNA-Ser NZ_KK316829.1 tRNAscan-SE exon 274208 274296 . - . ID=exon-AL55_RS23900-1;Parent=rna-AL55_RS23900;anticodon=(pos:complement(274260..274262));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS23900;product=tRNA-Ser NZ_KK316829.1 RefSeq gene 274374 275435 . + . ID=gene-AL55_RS23905;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=AL55_RS23905;old_locus_tag=AL55_03758 NZ_KK316829.1 Protein Homology CDS 274374 275435 . + 0 ID=cds-WP_003420576.1;Parent=gene-AL55_RS23905;Dbxref=GenBank:WP_003420576.1;Name=WP_003420576.1;gbkey=CDS;gene=hisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218289.1;locus_tag=AL55_RS23905;product=histidinol-phosphate transaminase;protein_id=WP_003420576.1;transl_table=11 NZ_KK316829.1 RefSeq gene 275481 276065 . - . ID=gene-AL55_RS23910;Name=AL55_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23910;old_locus_tag=AL55_03759 NZ_KK316829.1 Protein Homology CDS 275481 276065 . - 0 ID=cds-WP_003906211.1;Parent=gene-AL55_RS23910;Dbxref=GenBank:WP_003906211.1;Name=WP_003906211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218290.1;locus_tag=AL55_RS23910;product=TIGR03086 family metal-binding protein;protein_id=WP_003906211.1;transl_table=11 NZ_KK316829.1 RefSeq gene 276089 276913 . + . ID=gene-AL55_RS23915;Name=AL55_RS23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23915;old_locus_tag=AL55_03760 NZ_KK316829.1 Protein Homology CDS 276089 276913 . + 0 ID=cds-WP_009940267.1;Parent=gene-AL55_RS23915;Dbxref=GenBank:WP_009940267.1;Name=WP_009940267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218291.1;locus_tag=AL55_RS23915;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_009940267.1;transl_table=11 NZ_KK316829.1 RefSeq gene 276925 278172 . + . ID=gene-AL55_RS23920;Name=lipE;gbkey=Gene;gene=lipE;gene_biotype=protein_coding;locus_tag=AL55_RS23920;old_locus_tag=AL55_03761 NZ_KK316829.1 Protein Homology CDS 276925 278172 . + 0 ID=cds-WP_003420590.1;Parent=gene-AL55_RS23920;Dbxref=GenBank:WP_003420590.1;Name=WP_003420590.1;gbkey=CDS;gene=lipE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218292.1;locus_tag=AL55_RS23920;product=lipase LipE;protein_id=WP_003420590.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 278328 279332 . + . ID=gene-AL55_RS26665;Name=AL55_RS26665;end_range=279332,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS26665;old_locus_tag=AL55_03762;partial=true;pseudo=true NZ_KK316829.1 Protein Homology CDS 278328 279332 . + 0 ID=cds-AL55_RS26665;Parent=gene-AL55_RS26665;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=279332,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014741.6;locus_tag=AL55_RS26665;partial=true;product=DUF222 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq gene 279820 279906 . - . ID=gene-AL55_RS23925;Name=AL55_RS23925;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL55_RS23925;old_locus_tag=AL55_03763 NZ_KK316829.1 tRNAscan-SE tRNA 279820 279906 . - . ID=rna-AL55_RS23925;Parent=gene-AL55_RS23925;anticodon=(pos:complement(279870..279872));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS23925;product=tRNA-Ser NZ_KK316829.1 tRNAscan-SE exon 279820 279906 . - . ID=exon-AL55_RS23925-1;Parent=rna-AL55_RS23925;anticodon=(pos:complement(279870..279872));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL55_RS23925;product=tRNA-Ser NZ_KK316829.1 RefSeq gene 279942 280919 . + . ID=gene-AL55_RS23930;Name=AL55_RS23930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23930;old_locus_tag=AL55_03764 NZ_KK316829.1 Protein Homology CDS 279942 280919 . + 0 ID=cds-WP_003917958.1;Parent=gene-AL55_RS23930;Dbxref=GenBank:WP_003917958.1;Name=WP_003917958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917958.1;locus_tag=AL55_RS23930;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_003917958.1;transl_table=11 NZ_KK316829.1 RefSeq gene 280938 282134 . - . ID=gene-AL55_RS23935;Name=AL55_RS23935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23935;old_locus_tag=AL55_03765 NZ_KK316829.1 Protein Homology CDS 280938 282134 . - 0 ID=cds-WP_003420595.1;Parent=gene-AL55_RS23935;Dbxref=GenBank:WP_003420595.1;Name=WP_003420595.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218295.1;locus_tag=AL55_RS23935;product=cysteine desulfurase-like protein;protein_id=WP_003420595.1;transl_table=11 NZ_KK316829.1 RefSeq gene 282224 284224 . + . ID=gene-AL55_RS23940;Name=AL55_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23940;old_locus_tag=AL55_03766 NZ_KK316829.1 Protein Homology CDS 282224 284224 . + 0 ID=cds-WP_003420597.1;Parent=gene-AL55_RS23940;Dbxref=GenBank:WP_003420597.1;Name=WP_003420597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218296.1;locus_tag=AL55_RS23940;product=DUF6541 family protein;protein_id=WP_003420597.1;transl_table=11 NZ_KK316829.1 RefSeq gene 284228 284764 . + . ID=gene-AL55_RS23945;Name=bpa;gbkey=Gene;gene=bpa;gene_biotype=protein_coding;locus_tag=AL55_RS23945;old_locus_tag=AL55_03767 NZ_KK316829.1 Protein Homology CDS 284228 284764 . + 0 ID=cds-WP_003899690.1;Parent=gene-AL55_RS23945;Dbxref=GenBank:WP_003899690.1;Name=WP_003899690.1;gbkey=CDS;gene=bpa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218297.1;locus_tag=AL55_RS23945;product=proteasome activator protein Bpa;protein_id=WP_003899690.1;transl_table=11 NZ_KK316829.1 RefSeq gene 284768 285589 . + . ID=gene-AL55_RS23950;Name=wzt;gbkey=Gene;gene=wzt;gene_biotype=protein_coding;gene_synonym=rfbE;locus_tag=AL55_RS23950;old_locus_tag=AL55_03768 NZ_KK316829.1 Protein Homology CDS 284768 285589 . + 0 ID=cds-WP_003420603.1;Parent=gene-AL55_RS23950;Dbxref=GenBank:WP_003420603.1;Name=WP_003420603.1;gbkey=CDS;gene=wzt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218298.1;locus_tag=AL55_RS23950;product=galactan export ABC transporter ATP-binding subunit Wzt/RfbE;protein_id=WP_003420603.1;transl_table=11 NZ_KK316829.1 RefSeq gene 285586 286500 . + . ID=gene-AL55_RS23955;Name=glfT1;gbkey=Gene;gene=glfT1;gene_biotype=protein_coding;locus_tag=AL55_RS23955;old_locus_tag=AL55_03769 NZ_KK316829.1 Protein Homology CDS 285586 286500 . + 0 ID=cds-WP_003906213.1;Parent=gene-AL55_RS23955;Dbxref=GenBank:WP_003906213.1;Name=WP_003906213.1;gbkey=CDS;gene=glfT1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178014.1;locus_tag=AL55_RS23955;product=galactofuranosyltransferase GlfT1;protein_id=WP_003906213.1;transl_table=11 NZ_KK316829.1 RefSeq gene 286497 287339 . + . ID=gene-AL55_RS23960;Name=wzm;gbkey=Gene;gene=wzm;gene_biotype=protein_coding;gene_synonym=rfbD;locus_tag=AL55_RS23960;old_locus_tag=AL55_03770 NZ_KK316829.1 Protein Homology CDS 286497 287339 . + 0 ID=cds-WP_003420610.1;Parent=gene-AL55_RS23960;Dbxref=GenBank:WP_003420610.1;Name=WP_003420610.1;gbkey=CDS;gene=wzm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218300.1;locus_tag=AL55_RS23960;product=galactan export ABC transporter permease subunit Wzm/RfbD;protein_id=WP_003420610.1;transl_table=11 NZ_KK316829.1 RefSeq gene 287495 288475 . + . ID=gene-AL55_RS23965;Name=AL55_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23965;old_locus_tag=AL55_03771 NZ_KK316829.1 Protein Homology CDS 287495 288475 . + 0 ID=cds-WP_003420612.1;Parent=gene-AL55_RS23965;Dbxref=GenBank:WP_003420612.1;Name=WP_003420612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178015.1;locus_tag=AL55_RS23965;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003420612.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 288559 289543 . + . ID=gene-AL55_RS27130;Name=AL55_RS27130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27130;pseudo=true NZ_KK316829.1 Protein Homology CDS 288559 289543 . + 0 ID=cds-AL55_RS27130;Parent=gene-AL55_RS27130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218302.1;locus_tag=AL55_RS27130;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq gene 289524 290747 . - . ID=gene-AL55_RS23975;Name=AL55_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23975;old_locus_tag=AL55_03773 NZ_KK316829.1 Protein Homology CDS 289524 290747 . - 0 ID=cds-WP_003420618.1;Parent=gene-AL55_RS23975;Dbxref=GenBank:WP_003420618.1;Name=WP_003420618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218303.1;locus_tag=AL55_RS23975;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_003420618.1;transl_table=11 NZ_KK316829.1 RefSeq gene 290760 291686 . - . ID=gene-AL55_RS23980;Name=AL55_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23980;old_locus_tag=AL55_03774 NZ_KK316829.1 Protein Homology CDS 290760 291686 . - 0 ID=cds-WP_003420620.1;Parent=gene-AL55_RS23980;Dbxref=GenBank:WP_003420620.1;Name=WP_003420620.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218304.1;locus_tag=AL55_RS23980;product=SAM-dependent methyltransferase;protein_id=WP_003420620.1;transl_table=11 NZ_KK316829.1 RefSeq gene 291930 292415 . + . ID=gene-AL55_RS23985;Name=AL55_RS23985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23985;old_locus_tag=AL55_03775 NZ_KK316829.1 Protein Homology CDS 291930 292415 . + 0 ID=cds-WP_003911036.1;Parent=gene-AL55_RS23985;Dbxref=GenBank:WP_003911036.1;Name=WP_003911036.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218305.1;locus_tag=AL55_RS23985;product=GreA/GreB family elongation factor;protein_id=WP_003911036.1;transl_table=11 NZ_KK316829.1 RefSeq gene 292524 292889 . + . ID=gene-AL55_RS23990;Name=AL55_RS23990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS23990;old_locus_tag=AL55_03776 NZ_KK316829.1 Protein Homology CDS 292524 292889 . + 0 ID=cds-WP_003420627.1;Parent=gene-AL55_RS23990;Dbxref=GenBank:WP_003420627.1;Name=WP_003420627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218306.1;locus_tag=AL55_RS23990;product=arabinogalactan biosynthesis protein;protein_id=WP_003420627.1;transl_table=11 NZ_KK316829.1 RefSeq gene 292929 294314 . + . ID=gene-AL55_RS23995;Name=dprE1;gbkey=Gene;gene=dprE1;gene_biotype=protein_coding;locus_tag=AL55_RS23995;old_locus_tag=AL55_03777 NZ_KK316829.1 Protein Homology CDS 292929 294314 . + 0 ID=cds-WP_003420630.1;Parent=gene-AL55_RS23995;Dbxref=GenBank:WP_003420630.1;Name=WP_003420630.1;gbkey=CDS;gene=dprE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218307.1;locus_tag=AL55_RS23995;product=decaprenylphospho-beta-D-ribofuranose 2-dehydrogenase DprE1;protein_id=WP_003420630.1;transl_table=11 NZ_KK316829.1 RefSeq gene 294315 295079 . + . ID=gene-AL55_RS24000;Name=AL55_RS24000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24000;old_locus_tag=AL55_03778 NZ_KK316829.1 Protein Homology CDS 294315 295079 . + 0 ID=cds-WP_003420632.1;Parent=gene-AL55_RS24000;Dbxref=GenBank:WP_003420632.1;Name=WP_003420632.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420632.1;locus_tag=AL55_RS24000;product=decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase;protein_id=WP_003420632.1;transl_table=11 NZ_KK316829.1 RefSeq gene 295082 297013 . + . ID=gene-AL55_RS24005;Name=aftA;gbkey=Gene;gene=aftA;gene_biotype=protein_coding;locus_tag=AL55_RS24005;old_locus_tag=AL55_03779 NZ_KK316829.1 Protein Homology CDS 295082 297013 . + 0 ID=cds-WP_003899694.1;Parent=gene-AL55_RS24005;Dbxref=GenBank:WP_003899694.1;Name=WP_003899694.1;gbkey=CDS;gene=aftA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218309.1;locus_tag=AL55_RS24005;product=galactan 5-O-arabinofuranosyltransferase;protein_id=WP_003899694.1;transl_table=11 NZ_KK316829.1 RefSeq gene 297013 300297 . + . ID=gene-AL55_RS24010;Name=embC;gbkey=Gene;gene=embC;gene_biotype=protein_coding;locus_tag=AL55_RS24010;old_locus_tag=AL55_03780 NZ_KK316829.1 Protein Homology CDS 297013 300297 . + 0 ID=cds-WP_003901726.1;Parent=gene-AL55_RS24010;Dbxref=GenBank:WP_003901726.1;Name=WP_003901726.1;gbkey=CDS;gene=embC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218310.1;locus_tag=AL55_RS24010;product=arabinosyltransferase EmbC;protein_id=WP_003901726.1;transl_table=11 NZ_KK316829.1 RefSeq gene 300383 303667 . + . ID=gene-AL55_RS24015;Name=embA;gbkey=Gene;gene=embA;gene_biotype=protein_coding;locus_tag=AL55_RS24015;old_locus_tag=AL55_03781 NZ_KK316829.1 Protein Homology CDS 300383 303667 . + 0 ID=cds-WP_003899696.1;Parent=gene-AL55_RS24015;Dbxref=GenBank:WP_003899696.1;Name=WP_003899696.1;gbkey=CDS;gene=embA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218311.1;locus_tag=AL55_RS24015;product=arabinosyltransferase EmbA;protein_id=WP_003899696.1;transl_table=11 NZ_KK316829.1 RefSeq gene 303664 306960 . + . ID=gene-AL55_RS24020;Name=embB;gbkey=Gene;gene=embB;gene_biotype=protein_coding;locus_tag=AL55_RS24020;old_locus_tag=AL55_03782 NZ_KK316829.1 Protein Homology CDS 303664 306960 . + 0 ID=cds-WP_003901728.1;Parent=gene-AL55_RS24020;Dbxref=GenBank:WP_003901728.1;Name=WP_003901728.1;gbkey=CDS;gene=embB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218312.1;locus_tag=AL55_RS24020;product=arabinosyltransferase EmbB;protein_id=WP_003901728.1;transl_table=11 NZ_KK316829.1 RefSeq gene 307028 308155 . + . ID=gene-AL55_RS24025;Name=AL55_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24025;old_locus_tag=AL55_03783 NZ_KK316829.1 Protein Homology CDS 307028 308155 . + 0 ID=cds-WP_003420646.1;Parent=gene-AL55_RS24025;Dbxref=GenBank:WP_003420646.1;Name=WP_003420646.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178016.1;locus_tag=AL55_RS24025;product=MBL fold metallo-hydrolase;protein_id=WP_003420646.1;transl_table=11 NZ_KK316829.1 RefSeq gene 308235 310016 . + . ID=gene-AL55_RS24030;Name=AL55_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24030;old_locus_tag=AL55_03784 NZ_KK316829.1 Protein Homology CDS 308235 310016 . + 0 ID=cds-WP_003902556.1;Parent=gene-AL55_RS24030;Dbxref=GenBank:WP_003902556.1;Name=WP_003902556.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218314.1;locus_tag=AL55_RS24030;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003902556.1;transl_table=11 NZ_KK316829.1 RefSeq gene 310143 311477 . + . ID=gene-AL55_RS24035;Name=AL55_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24035;old_locus_tag=AL55_03785 NZ_KK316829.1 Protein Homology CDS 310143 311477 . + 0 ID=cds-WP_003900311.1-2;Parent=gene-AL55_RS24035;Dbxref=GenBank:WP_003900311.1;Name=WP_003900311.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215829.1;locus_tag=AL55_RS24035;product=ISL3-like element IS1557 family transposase;protein_id=WP_003900311.1;transl_table=11 NZ_KK316829.1 RefSeq gene 311530 313098 . - . ID=gene-AL55_RS24040;Name=AL55_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24040;old_locus_tag=AL55_03786 NZ_KK316829.1 Protein Homology CDS 311530 313098 . - 0 ID=cds-WP_003420767.1;Parent=gene-AL55_RS24040;Dbxref=GenBank:WP_003420767.1;Name=WP_003420767.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218316.2;locus_tag=AL55_RS24040;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003420767.1;transl_table=11 NZ_KK316829.1 RefSeq gene 313095 318296 . - . ID=gene-AL55_RS24045;Name=pks13;gbkey=Gene;gene=pks13;gene_biotype=protein_coding;locus_tag=AL55_RS24045;old_locus_tag=AL55_03787 NZ_KK316829.1 Protein Homology CDS 313095 318296 . - 0 ID=cds-WP_003906218.1;Parent=gene-AL55_RS24045;Dbxref=GenBank:WP_003906218.1;Name=WP_003906218.1;gbkey=CDS;gene=pks13;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218317.1;locus_tag=AL55_RS24045;product=polyketide synthase Pks13;protein_id=WP_003906218.1;transl_table=11 NZ_KK316829.1 RefSeq gene 318303 320192 . - . ID=gene-AL55_RS24050;Name=fadD32;gbkey=Gene;gene=fadD32;gene_biotype=protein_coding;locus_tag=AL55_RS24050;old_locus_tag=AL55_03788 NZ_KK316829.1 Protein Homology CDS 318303 320192 . - 0 ID=cds-WP_003917965.1;Parent=gene-AL55_RS24050;Dbxref=GenBank:WP_003917965.1;Name=WP_003917965.1;gbkey=CDS;gene=fadD32;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912356.1;locus_tag=AL55_RS24050;product=long-chain-fatty-acid--AMP ligase FadD32;protein_id=WP_003917965.1;transl_table=11 NZ_KK316829.1 RefSeq gene 320505 321515 . - . ID=gene-AL55_RS24055;Name=AL55_RS24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24055;old_locus_tag=AL55_03789 NZ_KK316829.1 Protein Homology CDS 320505 321515 . - 0 ID=cds-WP_003420779.1;Parent=gene-AL55_RS24055;Dbxref=GenBank:WP_003420779.1;Name=WP_003420779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218319.1;locus_tag=AL55_RS24055;product=phospholipase;protein_id=WP_003420779.1;transl_table=11 NZ_KK316829.1 RefSeq gene 321714 322613 . - . ID=gene-AL55_RS24060;Name=fbpD;gbkey=Gene;gene=fbpD;gene_biotype=protein_coding;locus_tag=AL55_RS24060;old_locus_tag=AL55_03790 NZ_KK316829.1 Protein Homology CDS 321714 322613 . - 0 ID=cds-WP_003420783.1;Parent=gene-AL55_RS24060;Dbxref=GenBank:WP_003420783.1;Name=WP_003420783.1;Ontology_term=GO:0016787;gbkey=CDS;gene=fbpD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178017.1;locus_tag=AL55_RS24060;product=esterase family protein;protein_id=WP_003420783.1;transl_table=11 NZ_KK316829.1 RefSeq gene 322793 323809 . - . ID=gene-AL55_RS24065;Name=ag85A;gbkey=Gene;gene=ag85A;gene_biotype=protein_coding;gene_synonym=fbpA;locus_tag=AL55_RS24065;old_locus_tag=AL55_03791 NZ_KK316829.1 Protein Homology CDS 322793 323809 . - 0 ID=cds-WP_003900759.1;Parent=gene-AL55_RS24065;Dbxref=GenBank:WP_003900759.1;Name=WP_003900759.1;gbkey=CDS;gene=ag85A;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218321.1;locus_tag=AL55_RS24065;product=diacylglycerol acyltransferase/mycolyltransferase Ag85A;protein_id=WP_003900759.1;transl_table=11 NZ_KK316829.1 RefSeq gene 324104 326101 . - . ID=gene-AL55_RS24070;Name=aftB;gbkey=Gene;gene=aftB;gene_biotype=protein_coding;locus_tag=AL55_RS24070;old_locus_tag=AL55_03792 NZ_KK316829.1 Protein Homology CDS 324104 326101 . - 0 ID=cds-WP_031647638.1;Parent=gene-AL55_RS24070;Dbxref=GenBank:WP_031647638.1;Name=WP_031647638.1;gbkey=CDS;gene=aftB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936680.1;locus_tag=AL55_RS24070;product=terminal beta-(1->2)-arabinofuranosyltransferase;protein_id=WP_031647638.1;transl_table=11 NZ_KK316829.1 RefSeq gene 326076 326984 . - . ID=gene-AL55_RS24075;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AL55_RS24075;old_locus_tag=AL55_03793 NZ_KK316829.1 Protein Homology CDS 326076 326984 . - 0 ID=cds-WP_003899704.1;Parent=gene-AL55_RS24075;Dbxref=GenBank:WP_003899704.1;Name=WP_003899704.1;gbkey=CDS;gene=ubiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218323.1;locus_tag=AL55_RS24075;product=decaprenyl-phosphate phosphoribosyltransferase;protein_id=WP_003899704.1;transl_table=11 NZ_KK316829.1 RefSeq gene 326991 327524 . - . ID=gene-AL55_RS24080;Name=AL55_RS24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24080;old_locus_tag=AL55_03794 NZ_KK316829.1 Protein Homology CDS 326991 327524 . - 0 ID=cds-WP_003899705.1;Parent=gene-AL55_RS24080;Dbxref=GenBank:WP_003899705.1;Name=WP_003899705.1;Ontology_term=GO:0008610,GO:0046839,GO:0042577;gbkey=CDS;go_function=lipid phosphatase activity|0042577||IEA;go_process=lipid biosynthetic process|0008610||IEA,phospholipid dephosphorylation|0046839||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899705.1;locus_tag=AL55_RS24080;product=phosphatase PAP2 family protein;protein_id=WP_003899705.1;transl_table=11 NZ_KK316829.1 RefSeq gene 327517 329430 . - . ID=gene-AL55_RS24085;Name=glfT2;gbkey=Gene;gene=glfT2;gene_biotype=protein_coding;locus_tag=AL55_RS24085;old_locus_tag=AL55_03795 NZ_KK316829.1 Protein Homology CDS 327517 329430 . - 0 ID=cds-WP_003900761.1;Parent=gene-AL55_RS24085;Dbxref=GenBank:WP_003900761.1;Name=WP_003900761.1;gbkey=CDS;gene=glfT2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218325.1;locus_tag=AL55_RS24085;product=galactofuranosyl transferase GlfT2;protein_id=WP_003900761.1;transl_table=11 NZ_KK316829.1 RefSeq gene 329427 330626 . - . ID=gene-AL55_RS24090;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=AL55_RS24090;old_locus_tag=AL55_03796 NZ_KK316829.1 Protein Homology CDS 329427 330626 . - 0 ID=cds-WP_003420798.1;Parent=gene-AL55_RS24090;Dbxref=GenBank:WP_003420798.1;Name=WP_003420798.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218326.1;locus_tag=AL55_RS24090;product=UDP-galactopyranose mutase;protein_id=WP_003420798.1;transl_table=11 NZ_KK316829.1 RefSeq gene 330890 331744 . + . ID=gene-AL55_RS24095;Name=pirG;gbkey=Gene;gene=pirG;gene_biotype=protein_coding;locus_tag=AL55_RS24095;old_locus_tag=AL55_03797 NZ_KK316829.1 Protein Homology CDS 330890 331744 . + 0 ID=cds-WP_003420801.1;Parent=gene-AL55_RS24095;Dbxref=GenBank:WP_003420801.1;Name=WP_003420801.1;gbkey=CDS;gene=pirG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218327.1;locus_tag=AL55_RS24095;product=exported repetitive protein;protein_id=WP_003420801.1;transl_table=11 NZ_KK316829.1 RefSeq gene 331907 333568 . + . ID=gene-AL55_RS24100;Name=AL55_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24100;old_locus_tag=AL55_03798 NZ_KK316829.1 Protein Homology CDS 331907 333568 . + 0 ID=cds-WP_003912357.1;Parent=gene-AL55_RS24100;Dbxref=GenBank:WP_003912357.1;Name=WP_003912357.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912357.1;locus_tag=AL55_RS24100;product=LGFP repeat-containing protein;protein_id=WP_003912357.1;transl_table=11 NZ_KK316829.1 RefSeq gene 333722 335236 . + . ID=gene-AL55_RS24105;Name=AL55_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24105;old_locus_tag=AL55_03799 NZ_KK316829.1 Protein Homology CDS 333722 335236 . + 0 ID=cds-WP_003420809.1;Parent=gene-AL55_RS24105;Dbxref=GenBank:WP_003420809.1;Name=WP_003420809.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178019.1;locus_tag=AL55_RS24105;product=PE family protein;protein_id=WP_003420809.1;transl_table=11 NZ_KK316829.1 RefSeq gene 335233 335385 . - . ID=gene-AL55_RS0105675;Name=AL55_RS0105675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105675 NZ_KK316829.1 Protein Homology CDS 335233 335385 . - 0 ID=cds-WP_003420812.1;Parent=gene-AL55_RS0105675;Dbxref=GenBank:WP_003420812.1;Name=WP_003420812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420812.1;locus_tag=AL55_RS0105675;product=PIN domain-containing protein;protein_id=WP_003420812.1;transl_table=11 NZ_KK316829.1 RefSeq gene 335545 336366 . - . ID=gene-AL55_RS24110;Name=AL55_RS24110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24110;old_locus_tag=AL55_03800 NZ_KK316829.1 Protein Homology CDS 335545 336366 . - 0 ID=cds-WP_003420817.1;Parent=gene-AL55_RS24110;Dbxref=GenBank:WP_003420817.1;Name=WP_003420817.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218330.1;locus_tag=AL55_RS24110;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_003420817.1;transl_table=11 NZ_KK316829.1 RefSeq gene 336381 337166 . - . ID=gene-AL55_RS24115;Name=AL55_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24115;old_locus_tag=AL55_03801 NZ_KK316829.1 Protein Homology CDS 336381 337166 . - 0 ID=cds-WP_003420820.1;Parent=gene-AL55_RS24115;Dbxref=GenBank:WP_003420820.1;Name=WP_003420820.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218331.1;locus_tag=AL55_RS24115;product=lysophospholipid acyltransferase family protein;protein_id=WP_003420820.1;transl_table=11 NZ_KK316829.1 RefSeq gene 337184 337939 . - . ID=gene-AL55_RS24120;Name=AL55_RS24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24120;old_locus_tag=AL55_03802 NZ_KK316829.1 Protein Homology CDS 337184 337939 . - 0 ID=cds-WP_003420824.1;Parent=gene-AL55_RS24120;Dbxref=GenBank:WP_003420824.1;Name=WP_003420824.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218332.1;locus_tag=AL55_RS24120;product=lysophospholipid acyltransferase family protein;protein_id=WP_003420824.1;transl_table=11 NZ_KK316829.1 RefSeq gene 337943 338722 . - . ID=gene-AL55_RS24125;Name=AL55_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24125;old_locus_tag=AL55_03803 NZ_KK316829.1 Protein Homology CDS 337943 338722 . - 0 ID=cds-WP_003420827.1;Parent=gene-AL55_RS24125;Dbxref=GenBank:WP_003420827.1;Name=WP_003420827.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218333.1;locus_tag=AL55_RS24125;product=lysophospholipid acyltransferase family protein;protein_id=WP_003420827.1;transl_table=11 NZ_KK316829.1 RefSeq gene 338798 339553 . + . ID=gene-AL55_RS24130;Name=AL55_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24130;old_locus_tag=AL55_03804 NZ_KK316829.1 Protein Homology CDS 338798 339553 . + 0 ID=cds-WP_003420830.1;Parent=gene-AL55_RS24130;Dbxref=GenBank:WP_003420830.1;Name=WP_003420830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218334.1;locus_tag=AL55_RS24130;product=aminoglycoside 3'-phosphotransferase;protein_id=WP_003420830.1;transl_table=11 NZ_KK316829.1 RefSeq gene 339600 341150 . + . ID=gene-AL55_RS24135;Name=AL55_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24135;old_locus_tag=AL55_03805 NZ_KK316829.1 Protein Homology CDS 339600 341150 . + 0 ID=cds-WP_003420837.1;Parent=gene-AL55_RS24135;Dbxref=GenBank:WP_003420837.1;Name=WP_003420837.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218335.1;locus_tag=AL55_RS24135;product=MBL fold metallo-hydrolase;protein_id=WP_003420837.1;transl_table=11 NZ_KK316829.1 RefSeq gene 341147 341482 . + . ID=gene-AL55_RS24140;Name=AL55_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24140;old_locus_tag=AL55_03806 NZ_KK316829.1 Protein Homology CDS 341147 341482 . + 0 ID=cds-WP_003420840.1;Parent=gene-AL55_RS24140;Dbxref=GenBank:WP_003420840.1;Name=WP_003420840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218336.1;locus_tag=AL55_RS24140;product=hypothetical protein;protein_id=WP_003420840.1;transl_table=11 NZ_KK316829.1 RefSeq gene 341570 342976 . - . ID=gene-AL55_RS24145;Name=papA2;gbkey=Gene;gene=papA2;gene_biotype=protein_coding;locus_tag=AL55_RS24145;old_locus_tag=AL55_03807 NZ_KK316829.1 Protein Homology CDS 341570 342976 . - 0 ID=cds-WP_003901737.1;Parent=gene-AL55_RS24145;Dbxref=GenBank:WP_003901737.1;Name=WP_003901737.1;gbkey=CDS;gene=papA2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178020.1;locus_tag=AL55_RS24145;product=trehalose-2-sulfate acyltransferase;protein_id=WP_003901737.1;transl_table=11 NZ_KK316829.1 RefSeq gene 343124 343837 . + . ID=gene-AL55_RS24150;Name=sap;gbkey=Gene;gene=sap;gene_biotype=protein_coding;locus_tag=AL55_RS24150;old_locus_tag=AL55_03808 NZ_KK316829.1 Protein Homology CDS 343124 343837 . + 0 ID=cds-WP_003420848.1;Parent=gene-AL55_RS24150;Dbxref=GenBank:WP_003420848.1;Name=WP_003420848.1;gbkey=CDS;gene=sap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218338.1;locus_tag=AL55_RS24150;product=sulfolipid-1 biosynthesis transporter Sap;protein_id=WP_003420848.1;transl_table=11 NZ_KK316829.1 RefSeq gene 343872 345086 . + . ID=gene-AL55_RS24155;Name=chp1;gbkey=Gene;gene=chp1;gene_biotype=protein_coding;locus_tag=AL55_RS24155;old_locus_tag=AL55_03809 NZ_KK316829.1 Protein Homology CDS 343872 345086 . + 0 ID=cds-WP_003899709.1;Parent=gene-AL55_RS24155;Dbxref=GenBank:WP_003899709.1;Name=WP_003899709.1;gbkey=CDS;gene=chp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218339.1;locus_tag=AL55_RS24155;product=sulfolipid-1 biosynthesis membrane-anchored acyltransferase Chp1;protein_id=WP_003899709.1;transl_table=11 NZ_KK316829.1 RefSeq gene 345411 348680 . - . ID=gene-AL55_RS24160;Name=mmpL8;gbkey=Gene;gene=mmpL8;gene_biotype=protein_coding;locus_tag=AL55_RS24160;old_locus_tag=AL55_03810 NZ_KK316829.1 Protein Homology CDS 345411 348680 . - 0 ID=cds-WP_003899710.1;Parent=gene-AL55_RS24160;Dbxref=GenBank:WP_003899710.1;Name=WP_003899710.1;gbkey=CDS;gene=mmpL8;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218340.1;locus_tag=AL55_RS24160;product=sulfolipid-1 RND transporter MmpL8;protein_id=WP_003899710.1;transl_table=11 NZ_KK316829.1 RefSeq gene 348790 350325 . - . ID=gene-AL55_RS24165;Name=papA1;gbkey=Gene;gene=papA1;gene_biotype=protein_coding;locus_tag=AL55_RS24165;old_locus_tag=AL55_03811 NZ_KK316829.1 Protein Homology CDS 348790 350325 . - 0 ID=cds-WP_003899711.1;Parent=gene-AL55_RS24165;Dbxref=GenBank:WP_003899711.1;Name=WP_003899711.1;gbkey=CDS;gene=papA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218341.1;locus_tag=AL55_RS24165;product=acyltransferase PapA1;protein_id=WP_003899711.1;transl_table=11 NZ_KK316829.1 RefSeq gene 350376 356756 . - . ID=gene-AL55_RS24170;Name=pks2;gbkey=Gene;gene=pks2;gene_biotype=protein_coding;locus_tag=AL55_RS24170;old_locus_tag=AL55_03812 NZ_KK316829.1 Protein Homology CDS 350376 356756 . - 0 ID=cds-WP_003900763.1;Parent=gene-AL55_RS24170;Dbxref=GenBank:WP_003900763.1;Name=WP_003900763.1;gbkey=CDS;gene=pks2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218342.1;locus_tag=AL55_RS24170;product=phthioceranic/hydroxyphthioceranic acid synthase;protein_id=WP_003900763.1;transl_table=11 NZ_KK316829.1 RefSeq gene 356963 358717 . + . ID=gene-AL55_RS24175;Name=fadD23;gbkey=Gene;gene=fadD23;gene_biotype=protein_coding;locus_tag=AL55_RS24175;old_locus_tag=AL55_03813 NZ_KK316829.1 Protein Homology CDS 356963 358717 . + 0 ID=cds-WP_003901740.1;Parent=gene-AL55_RS24175;Dbxref=GenBank:WP_003901740.1;Name=WP_003901740.1;gbkey=CDS;gene=fadD23;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218343.1;locus_tag=AL55_RS24175;product=long-chain-fatty-acid--CoA ligase FadD23;protein_id=WP_003901740.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 358721 359937 . - . ID=gene-AL55_RS24180;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AL55_RS24180;old_locus_tag=AL55_03814;pseudo=true NZ_KK316829.1 Protein Homology CDS 358721 359937 . - 0 ID=cds-AL55_RS24180;Parent=gene-AL55_RS24180;Note=frameshifted;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217307.1;locus_tag=AL55_RS24180;product=IS607 family element RNA-guided endonuclease TnpB;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq gene 359937 360518 . - . ID=gene-AL55_RS24185;Name=AL55_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24185;old_locus_tag=AL55_03815 NZ_KK316829.1 Protein Homology CDS 359937 360518 . - 0 ID=cds-WP_003420870.1;Parent=gene-AL55_RS24185;Dbxref=GenBank:WP_003420870.1;Name=WP_003420870.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217308.1;locus_tag=AL55_RS24185;product=IS607-like element IS1537 family transposase;protein_id=WP_003420870.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 360549 362160 . - . ID=gene-AL55_RS0105685;Name=AL55_RS0105685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0105685;old_locus_tag=AL55_03816;pseudo=true NZ_KK316829.1 Protein Homology CDS 360549 362160 . - 0 ID=cds-AL55_RS0105685;Parent=gene-AL55_RS0105685;Note=frameshifted;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218346.1;locus_tag=AL55_RS0105685;product=phytoene desaturase family protein;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 362218 362838 . - . ID=gene-AL55_RS27840;Name=AL55_RS27840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27840;partial=true;pseudo=true;start_range=.,362218 NZ_KK316829.1 Protein Homology CDS 362218 362838 . - 0 ID=cds-AL55_RS27840;Parent=gene-AL55_RS27840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218347.1;locus_tag=AL55_RS27840;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;start_range=.,362218;transl_table=11 NZ_KK316829.1 RefSeq gene 362910 363392 . + . ID=gene-AL55_RS24190;Name=AL55_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24190;old_locus_tag=AL55_03817 NZ_KK316829.1 Protein Homology CDS 362910 363392 . + 0 ID=cds-WP_003420879.1;Parent=gene-AL55_RS24190;Dbxref=GenBank:WP_003420879.1;Name=WP_003420879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218348.1;locus_tag=AL55_RS24190;product=DUF2834 domain-containing protein;protein_id=WP_003420879.1;transl_table=11 NZ_KK316829.1 RefSeq gene 363389 363964 . - . ID=gene-AL55_RS24195;Name=AL55_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24195;old_locus_tag=AL55_03818 NZ_KK316829.1 Protein Homology CDS 363389 363964 . - 0 ID=cds-WP_003420880.1;Parent=gene-AL55_RS24195;Dbxref=GenBank:WP_003420880.1;Name=WP_003420880.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218349.1;locus_tag=AL55_RS24195;product=class I SAM-dependent methyltransferase;protein_id=WP_003420880.1;transl_table=11 NZ_KK316829.1 RefSeq gene 364020 364811 . + . ID=gene-AL55_RS24200;Name=AL55_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24200;old_locus_tag=AL55_03819 NZ_KK316829.1 Protein Homology CDS 364020 364811 . + 0 ID=cds-WP_003420884.1;Parent=gene-AL55_RS24200;Dbxref=GenBank:WP_003420884.1;Name=WP_003420884.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218350.1;locus_tag=AL55_RS24200;product=AraC family transcriptional regulator;protein_id=WP_003420884.1;transl_table=11 NZ_KK316829.1 RefSeq gene 364808 366067 . - . ID=gene-AL55_RS24205;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AL55_RS24205;old_locus_tag=AL55_03820 NZ_KK316829.1 Protein Homology CDS 364808 366067 . - 0 ID=cds-WP_003420889.1;Parent=gene-AL55_RS24205;Dbxref=GenBank:WP_003420889.1;Name=WP_003420889.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218351.1;locus_tag=AL55_RS24205;product=serine--tRNA ligase;protein_id=WP_003420889.1;transl_table=11 NZ_KK316829.1 RefSeq gene 366200 367549 . + . ID=gene-AL55_RS24210;Name=AL55_RS24210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24210;old_locus_tag=AL55_03821 NZ_KK316829.1 Protein Homology CDS 366200 367549 . + 0 ID=cds-WP_003906228.1;Parent=gene-AL55_RS24210;Dbxref=GenBank:WP_003906228.1;Name=WP_003906228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218352.1;locus_tag=AL55_RS24210;product=septum formation family protein;protein_id=WP_003906228.1;transl_table=11 NZ_KK316829.1 RefSeq gene 367554 367967 . + . ID=gene-AL55_RS24215;Name=AL55_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24215;old_locus_tag=AL55_03822 NZ_KK316829.1 Protein Homology CDS 367554 367967 . + 0 ID=cds-WP_003899719.1;Parent=gene-AL55_RS24215;Dbxref=GenBank:WP_003899719.1;Name=WP_003899719.1;Ontology_term=GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218353.1;locus_tag=AL55_RS24215;product=metallopeptidase family protein;protein_id=WP_003899719.1;transl_table=11 NZ_KK316829.1 RefSeq gene 367964 368185 . + . ID=gene-AL55_RS26675;Name=AL55_RS26675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26675 NZ_KK316829.1 Protein Homology CDS 367964 368185 . + 0 ID=cds-WP_003912385.1;Parent=gene-AL55_RS26675;Dbxref=GenBank:WP_003912385.1;Name=WP_003912385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912385.1;locus_tag=AL55_RS26675;product=hypothetical protein;protein_id=WP_003912385.1;transl_table=11 NZ_KK316829.1 RefSeq gene 368162 368860 . - . ID=gene-AL55_RS24220;Name=AL55_RS24220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24220;old_locus_tag=AL55_03823 NZ_KK316829.1 Protein Homology CDS 368162 368860 . - 0 ID=cds-WP_003906229.1;Parent=gene-AL55_RS24220;Dbxref=GenBank:WP_003906229.1;Name=WP_003906229.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218354.1;locus_tag=AL55_RS24220;product=histidine phosphatase family protein;protein_id=WP_003906229.1;transl_table=11 NZ_KK316829.1 RefSeq gene 368857 369822 . - . ID=gene-AL55_RS24225;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AL55_RS24225;old_locus_tag=AL55_03824 NZ_KK316829.1 Protein Homology CDS 368857 369822 . - 0 ID=cds-WP_003420906.1;Parent=gene-AL55_RS24225;Dbxref=GenBank:WP_003420906.1;Name=WP_003420906.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218355.1;locus_tag=AL55_RS24225;product=prephenate dehydratase;protein_id=WP_003420906.1;transl_table=11 NZ_KK316829.1 RefSeq gene 369918 370694 . + . ID=gene-AL55_RS24230;Name=AL55_RS24230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24230;old_locus_tag=AL55_03825 NZ_KK316829.1 Protein Homology CDS 369918 370694 . + 0 ID=cds-WP_003420910.1;Parent=gene-AL55_RS24230;Dbxref=GenBank:WP_003420910.1;Name=WP_003420910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218356.1;locus_tag=AL55_RS24230;product=DUF2470 domain-containing protein;protein_id=WP_003420910.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 370765 371085 . + . ID=gene-AL55_RS24235;Name=AL55_RS24235;end_range=371085,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS24235;old_locus_tag=AL55_03826;partial=true;pseudo=true;start_range=.,370765 NZ_KK316829.1 Protein Homology CDS 370765 371085 . + 0 ID=cds-AL55_RS24235;Parent=gene-AL55_RS24235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0070726;end_range=371085,.;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020188363.1;locus_tag=AL55_RS24235;partial=true;product=LCP family protein;pseudo=true;start_range=.,370765;transl_table=11 NZ_KK316829.1 RefSeq gene 371331 371876 . + . ID=gene-AL55_RS24240;Name=bfrB;gbkey=Gene;gene=bfrB;gene_biotype=protein_coding;locus_tag=AL55_RS24240;old_locus_tag=AL55_03827 NZ_KK316829.1 Protein Homology CDS 371331 371876 . + 0 ID=cds-WP_003420920.1;Parent=gene-AL55_RS24240;Dbxref=GenBank:WP_003420920.1;Name=WP_003420920.1;gbkey=CDS;gene=bfrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218358.1;locus_tag=AL55_RS24240;product=ferritin BfrB;protein_id=WP_003420920.1;transl_table=11 NZ_KK316829.1 RefSeq gene 371891 372715 . - . ID=gene-AL55_RS24245;Name=AL55_RS24245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24245;old_locus_tag=AL55_03828 NZ_KK316829.1 Protein Homology CDS 371891 372715 . - 0 ID=cds-WP_003901745.1;Parent=gene-AL55_RS24245;Dbxref=GenBank:WP_003901745.1;Name=WP_003901745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218359.1;locus_tag=AL55_RS24245;product=glycerophosphodiester phosphodiesterase;protein_id=WP_003901745.1;transl_table=11 NZ_KK316829.1 RefSeq gene 372721 373749 . - . ID=gene-AL55_RS24250;Name=AL55_RS24250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24250;old_locus_tag=AL55_03829 NZ_KK316829.1 Protein Homology CDS 372721 373749 . - 0 ID=cds-WP_003899726.1;Parent=gene-AL55_RS24250;Dbxref=GenBank:WP_003899726.1;Name=WP_003899726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218360.1;locus_tag=AL55_RS24250;product=DUF4328 domain-containing protein;protein_id=WP_003899726.1;transl_table=11 NZ_KK316829.1 RefSeq gene 374288 374437 . + . ID=gene-AL55_RS27415;Name=AL55_RS27415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27415 NZ_KK316829.1 Protein Homology CDS 374288 374437 . + 0 ID=cds-WP_003420934.1;Parent=gene-AL55_RS27415;Dbxref=GenBank:WP_003420934.1;Name=WP_003420934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420934.1;locus_tag=AL55_RS27415;product=hypothetical protein;protein_id=WP_003420934.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 375222 375459 . + . ID=gene-AL55_RS27845;Name=AL55_RS27845;end_range=375459,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27845;partial=true;pseudo=true;start_range=.,375222 NZ_KK316829.1 Protein Homology CDS 375222 375459 . + 0 ID=cds-AL55_RS27845;Parent=gene-AL55_RS27845;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=375459,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=AL55_RS27845;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,375222;transl_table=11 NZ_KK316829.1 RefSeq gene 375928 376419 . + . ID=gene-AL55_RS24255;Name=AL55_RS24255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24255;old_locus_tag=AL55_03830 NZ_KK316829.1 Protein Homology CDS 375928 376419 . + 0 ID=cds-WP_003422266.1;Parent=gene-AL55_RS24255;Dbxref=GenBank:WP_003422266.1;Name=WP_003422266.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013698.7;locus_tag=AL55_RS24255;product=IS110 family transposase;protein_id=WP_003422266.1;transl_table=11 NZ_KK316829.1 RefSeq gene 376434 376793 . + . ID=gene-AL55_RS24260;Name=AL55_RS24260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24260;old_locus_tag=AL55_03831 NZ_KK316829.1 Protein Homology CDS 376434 376793 . + 0 ID=cds-WP_003900767.1;Parent=gene-AL55_RS24260;Dbxref=GenBank:WP_003900767.1;Name=WP_003900767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218362.1;locus_tag=AL55_RS24260;product=hypothetical protein;protein_id=WP_003900767.1;transl_table=11 NZ_KK316829.1 RefSeq gene 377407 377571 . - . ID=gene-AL55_RS27420;Name=AL55_RS27420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27420 NZ_KK316829.1 Protein Homology CDS 377407 377571 . - 0 ID=cds-WP_003399671.1;Parent=gene-AL55_RS27420;Dbxref=GenBank:WP_003399671.1;Name=WP_003399671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003399671.1;locus_tag=AL55_RS27420;product=hypothetical protein;protein_id=WP_003399671.1;transl_table=11 NZ_KK316829.1 RefSeq gene 377857 378480 . + . ID=gene-AL55_RS24265;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=AL55_RS24265;old_locus_tag=AL55_03832 NZ_KK316829.1 Protein Homology CDS 377857 378480 . + 0 ID=cds-WP_003399735.1;Parent=gene-AL55_RS24265;Dbxref=GenBank:WP_003399735.1;Name=WP_003399735.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218363.1;locus_tag=AL55_RS24265;product=superoxide dismutase;protein_id=WP_003399735.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 378691 379223 . + . ID=gene-AL55_RS0105710;Name=AL55_RS0105710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0105710;old_locus_tag=AL55_03833;pseudo=true NZ_KK316829.1 Protein Homology CDS 378691 379223 . + 0 ID=cds-AL55_RS0105710;Parent=gene-AL55_RS0105710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218364.1;locus_tag=AL55_RS0105710;product=peptidase;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq gene 379478 380386 . + . ID=gene-AL55_RS24270;Name=AL55_RS24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24270;old_locus_tag=AL55_03834 NZ_KK316829.1 Protein Homology CDS 379478 380386 . + 0 ID=cds-WP_003399745.1;Parent=gene-AL55_RS24270;Dbxref=GenBank:WP_003399745.1;Name=WP_003399745.1;Ontology_term=GO:0030001,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218365.1;locus_tag=AL55_RS24270;product=TMEM165/GDT1 family protein;protein_id=WP_003399745.1;transl_table=11 NZ_KK316829.1 RefSeq gene 380651 381049 . + . ID=gene-AL55_RS24275;Name=espR;gbkey=Gene;gene=espR;gene_biotype=protein_coding;locus_tag=AL55_RS24275;old_locus_tag=AL55_03835 NZ_KK316829.1 Protein Homology CDS 380651 381049 . + 0 ID=cds-WP_003399759.1;Parent=gene-AL55_RS24275;Dbxref=GenBank:WP_003399759.1;Name=WP_003399759.1;gbkey=CDS;gene=espR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218366.1;locus_tag=AL55_RS24275;product=type VII secretion system ESX-1 transcriptional regulator EspR;protein_id=WP_003399759.1;transl_table=11 NZ_KK316829.1 RefSeq gene 381167 381823 . + . ID=gene-AL55_RS24280;Name=AL55_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24280;old_locus_tag=AL55_03836 NZ_KK316829.1 Protein Homology CDS 381167 381823 . + 0 ID=cds-WP_003399771.1;Parent=gene-AL55_RS24280;Dbxref=GenBank:WP_003399771.1;Name=WP_003399771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218367.1;locus_tag=AL55_RS24280;product=DUF6474 family protein;protein_id=WP_003399771.1;transl_table=11 NZ_KK316829.1 RefSeq gene 381835 382119 . + . ID=gene-AL55_RS24285;Name=AL55_RS24285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24285;old_locus_tag=AL55_03837 NZ_KK316829.1 Protein Homology CDS 381835 382119 . + 0 ID=cds-WP_003399775.1;Parent=gene-AL55_RS24285;Dbxref=GenBank:WP_003399775.1;Name=WP_003399775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218368.1;locus_tag=AL55_RS24285;product=hypothetical protein;protein_id=WP_003399775.1;transl_table=11 NZ_KK316829.1 RefSeq gene 382226 382630 . + . ID=gene-AL55_RS24290;Name=AL55_RS24290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24290;old_locus_tag=AL55_03838 NZ_KK316829.1 Protein Homology CDS 382226 382630 . + 0 ID=cds-WP_003399779.1;Parent=gene-AL55_RS24290;Dbxref=GenBank:WP_003399779.1;Name=WP_003399779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218369.1;locus_tag=AL55_RS24290;product=Rv3852 family protein;protein_id=WP_003399779.1;transl_table=11 NZ_KK316829.1 RefSeq gene 382647 383120 . + . ID=gene-AL55_RS24295;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=AL55_RS24295;old_locus_tag=AL55_03839 NZ_KK316829.1 Protein Homology CDS 382647 383120 . + 0 ID=cds-WP_003399786.1;Parent=gene-AL55_RS24295;Dbxref=GenBank:WP_003399786.1;Name=WP_003399786.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218370.1;locus_tag=AL55_RS24295;product=ribonuclease E activity regulator RraA;protein_id=WP_003399786.1;transl_table=11 NZ_KK316829.1 RefSeq gene 383156 384625 . - . ID=gene-AL55_RS24300;Name=ethA;gbkey=Gene;gene=ethA;gene_biotype=protein_coding;locus_tag=AL55_RS24300;old_locus_tag=AL55_03840 NZ_KK316829.1 Protein Homology CDS 383156 384625 . - 0 ID=cds-WP_003899731.1;Parent=gene-AL55_RS24300;Dbxref=GenBank:WP_003899731.1;Name=WP_003899731.1;gbkey=CDS;gene=ethA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218371.1;locus_tag=AL55_RS24300;product=FAD-containing monooxygenase EthA;protein_id=WP_003899731.1;transl_table=11 NZ_KK316829.1 RefSeq gene 384701 385351 . + . ID=gene-AL55_RS24305;Name=ethR;gbkey=Gene;gene=ethR;gene_biotype=protein_coding;locus_tag=AL55_RS24305;old_locus_tag=AL55_03841 NZ_KK316829.1 Protein Homology CDS 384701 385351 . + 0 ID=cds-WP_003399797.1;Parent=gene-AL55_RS24305;Dbxref=GenBank:WP_003399797.1;Name=WP_003399797.1;gbkey=CDS;gene=ethR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218372.1;locus_tag=AL55_RS24305;product=HTH-type transcriptional regulator EthR;protein_id=WP_003399797.1;transl_table=11 NZ_KK316829.1 RefSeq gene 385553 386560 . - . ID=gene-AL55_RS24310;Name=AL55_RS24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24310;old_locus_tag=AL55_03842 NZ_KK316829.1 Protein Homology CDS 385553 386560 . - 0 ID=cds-WP_003399801.1;Parent=gene-AL55_RS24310;Dbxref=GenBank:WP_003399801.1;Name=WP_003399801.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218373.1;locus_tag=AL55_RS24310;product=PHP domain-containing protein;protein_id=WP_003399801.1;transl_table=11 NZ_KK316829.1 RefSeq gene 386569 386766 . - . ID=gene-AL55_RS24315;Name=AL55_RS24315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24315;old_locus_tag=AL55_03843 NZ_KK316829.1 GeneMarkS-2+ CDS 386569 386766 . - 0 ID=cds-WP_003399803.1;Parent=gene-AL55_RS24315;Dbxref=GenBank:WP_003399803.1;Name=WP_003399803.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS24315;product=hypothetical protein;protein_id=WP_003399803.1;transl_table=11 NZ_KK316829.1 RefSeq gene 387191 388657 . - . ID=gene-AL55_RS24320;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=AL55_RS24320;old_locus_tag=AL55_03845 NZ_KK316829.1 Protein Homology CDS 387191 388657 . - 0 ID=cds-WP_003899732.1;Parent=gene-AL55_RS24320;Dbxref=GenBank:WP_003899732.1;Name=WP_003899732.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218375.1;locus_tag=AL55_RS24320;product=glutamate synthase subunit beta;protein_id=WP_003899732.1;transl_table=11 NZ_KK316829.1 RefSeq gene 388650 393233 . - . ID=gene-AL55_RS24325;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=AL55_RS24325;old_locus_tag=AL55_03846 NZ_KK316829.1 Protein Homology CDS 388650 393233 . - 0 ID=cds-WP_003899733.1;Parent=gene-AL55_RS24325;Dbxref=GenBank:WP_003899733.1;Name=WP_003899733.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218376.1;locus_tag=AL55_RS24325;product=glutamate synthase large subunit;protein_id=WP_003899733.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 393929 395100 . + . ID=gene-AL55_RS0105720;Name=AL55_RS0105720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0105720;old_locus_tag=AL55_03847;pseudo=true NZ_KK316829.1 Protein Homology CDS 393929 395100 . + 0 ID=cds-AL55_RS0105720;Parent=gene-AL55_RS0105720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218377.1;locus_tag=AL55_RS0105720;product=MinD/ParA family ATP-binding protein;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq gene 395097 395423 . + . ID=gene-AL55_RS24330;Name=AL55_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24330;old_locus_tag=AL55_03848 NZ_KK316829.1 Protein Homology CDS 395097 395423 . + 0 ID=cds-WP_003902567.1;Parent=gene-AL55_RS24330;Dbxref=GenBank:WP_003902567.1;Name=WP_003902567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218378.1;locus_tag=AL55_RS24330;product=hypothetical protein;protein_id=WP_003902567.1;transl_table=11 NZ_KK316829.1 RefSeq gene 395322 395672 . - . ID=gene-AL55_RS24335;Name=whiB6;gbkey=Gene;gene=whiB6;gene_biotype=protein_coding;locus_tag=AL55_RS24335;old_locus_tag=AL55_03849 NZ_KK316829.1 Protein Homology CDS 395322 395672 . - 0 ID=cds-WP_003899734.1;Parent=gene-AL55_RS24335;Dbxref=GenBank:WP_003899734.1;Name=WP_003899734.1;gbkey=CDS;gene=whiB6;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899734.1;locus_tag=AL55_RS24335;product=transcriptional regulator WhiB6;protein_id=WP_003899734.1;transl_table=11 NZ_KK316829.1 RefSeq gene 396065 397177 . + . ID=gene-AL55_RS24340;Name=AL55_RS24340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24340;old_locus_tag=AL55_03850 NZ_KK316829.1 Protein Homology CDS 396065 397177 . + 0 ID=cds-WP_015288657.1;Parent=gene-AL55_RS24340;Dbxref=GenBank:WP_015288657.1;Name=WP_015288657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291786.1;locus_tag=AL55_RS24340;product=ESX-1 type VII secretion system transcriptional regulator EspM;protein_id=WP_015288657.1;transl_table=11 NZ_KK316829.1 RefSeq gene 397420 398628 . + . ID=gene-AL55_RS24345;Name=espE;gbkey=Gene;gene=espE;gene_biotype=protein_coding;locus_tag=AL55_RS24345;old_locus_tag=AL55_03851 NZ_KK316829.1 Protein Homology CDS 397420 398628 . + 0 ID=cds-WP_003899736.1;Parent=gene-AL55_RS24345;Dbxref=GenBank:WP_003899736.1;Name=WP_003899736.1;gbkey=CDS;gene=espE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218381.1;locus_tag=AL55_RS24345;product=type VII secretion system ESX-1 associated protein EspE;protein_id=WP_003899736.1;transl_table=11 NZ_KK316829.1 RefSeq gene 398716 399027 . + . ID=gene-AL55_RS24350;Name=espF;gbkey=Gene;gene=espF;gene_biotype=protein_coding;locus_tag=AL55_RS24350;old_locus_tag=AL55_03852 NZ_KK316829.1 Protein Homology CDS 398716 399027 . + 0 ID=cds-WP_003899737.1;Parent=gene-AL55_RS24350;Dbxref=GenBank:WP_003899737.1;Name=WP_003899737.1;gbkey=CDS;gene=espF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218382.1;locus_tag=AL55_RS24350;product=type VII secretion system ESX-1 associated protein EspF;protein_id=WP_003899737.1;transl_table=11 NZ_KK316829.1 RefSeq gene 399030 399881 . + . ID=gene-AL55_RS24355;Name=espG1;gbkey=Gene;gene=espG1;gene_biotype=protein_coding;locus_tag=AL55_RS24355;old_locus_tag=AL55_03853 NZ_KK316829.1 Protein Homology CDS 399030 399881 . + 0 ID=cds-WP_003399839.1;Parent=gene-AL55_RS24355;Dbxref=GenBank:WP_003399839.1;Name=WP_003399839.1;gbkey=CDS;gene=espG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218383.1;locus_tag=AL55_RS24355;product=type VII secretion system ESX-1 adaptor EspG1;protein_id=WP_003399839.1;transl_table=11 NZ_KK316829.1 RefSeq gene 399920 400471 . + . ID=gene-AL55_RS24360;Name=espH;gbkey=Gene;gene=espH;gene_biotype=protein_coding;locus_tag=AL55_RS24360;old_locus_tag=AL55_03854 NZ_KK316829.1 Protein Homology CDS 399920 400471 . + 0 ID=cds-WP_003399844.1;Parent=gene-AL55_RS24360;Dbxref=GenBank:WP_003399844.1;Name=WP_003399844.1;gbkey=CDS;gene=espH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218384.1;locus_tag=AL55_RS24360;product=type VII secretion system ESX-1 associated protein EspH;protein_id=WP_003399844.1;transl_table=11 NZ_KK316829.1 RefSeq gene 400464 402185 . + . ID=gene-AL55_RS24365;Name=eccA1;gbkey=Gene;gene=eccA1;gene_biotype=protein_coding;locus_tag=AL55_RS24365;old_locus_tag=AL55_03855 NZ_KK316829.1 Protein Homology CDS 400464 402185 . + 0 ID=cds-WP_003399850.1;Parent=gene-AL55_RS24365;Dbxref=GenBank:WP_003399850.1;Name=WP_003399850.1;gbkey=CDS;gene=eccA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218385.1;locus_tag=AL55_RS24365;product=type VII secretion system ESX-1 AAA family ATPase EccA1;protein_id=WP_003399850.1;transl_table=11 NZ_KK316829.1 RefSeq gene 402189 403631 . + . ID=gene-AL55_RS24370;Name=eccB1;gbkey=Gene;gene=eccB1;gene_biotype=protein_coding;locus_tag=AL55_RS24370;old_locus_tag=AL55_03856 NZ_KK316829.1 Protein Homology CDS 402189 403631 . + 0 ID=cds-WP_003399854.1;Parent=gene-AL55_RS24370;Dbxref=GenBank:WP_003399854.1;Name=WP_003399854.1;gbkey=CDS;gene=eccB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218386.1;locus_tag=AL55_RS24370;product=type VII secretion system ESX-1 subunit EccB1;protein_id=WP_003399854.1;transl_table=11 NZ_KK316829.1 RefSeq gene 403631 405874 . + . ID=gene-AL55_RS24375;Name=eccCa1;gbkey=Gene;gene=eccCa1;gene_biotype=protein_coding;locus_tag=AL55_RS24375;old_locus_tag=AL55_03857 NZ_KK316829.1 Protein Homology CDS 403631 405874 . + 0 ID=cds-WP_003899738.1;Parent=gene-AL55_RS24375;Dbxref=GenBank:WP_003899738.1;Name=WP_003899738.1;gbkey=CDS;gene=eccCa1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218387.1;locus_tag=AL55_RS24375;product=type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase EccCa1;protein_id=WP_003899738.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 405890 405963 . + . ID=gene-AL55_RS28305;Name=AL55_RS28305;end_range=405963,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS28305;partial=true;pseudo=true NZ_KK316829.1 Protein Homology CDS 405890 405963 . + 0 ID=cds-AL55_RS28305;Parent=gene-AL55_RS28305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=405963,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=AL55_RS28305;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq gene 405977 407752 . + . ID=gene-AL55_RS24380;Name=eccCb1;gbkey=Gene;gene=eccCb1;gene_biotype=protein_coding;locus_tag=AL55_RS24380;old_locus_tag=AL55_03858 NZ_KK316829.1 Protein Homology CDS 405977 407752 . + 0 ID=cds-WP_003399865.1;Parent=gene-AL55_RS24380;Dbxref=GenBank:WP_003399865.1;Name=WP_003399865.1;gbkey=CDS;gene=eccCb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218388.1;locus_tag=AL55_RS24380;product=type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase EccCb1;protein_id=WP_003399865.1;transl_table=11 NZ_KK316829.1 RefSeq gene 407895 408191 . + . ID=gene-AL55_RS24385;Name=AL55_RS24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24385;old_locus_tag=AL55_03859 NZ_KK316829.1 Protein Homology CDS 407895 408191 . + 0 ID=cds-WP_003399870.1;Parent=gene-AL55_RS24385;Dbxref=GenBank:WP_003399870.1;Name=WP_003399870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288658.1;locus_tag=AL55_RS24385;product=type VII secretion system ESX-1 target PE35;protein_id=WP_003399870.1;transl_table=11 NZ_KK316829.1 RefSeq gene 408225 409331 . + . ID=gene-AL55_RS24390;Name=AL55_RS24390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24390;old_locus_tag=AL55_03860 NZ_KK316829.1 Protein Homology CDS 408225 409331 . + 0 ID=cds-WP_003399879.1;Parent=gene-AL55_RS24390;Dbxref=GenBank:WP_003399879.1;Name=WP_003399879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178022.1;locus_tag=AL55_RS24390;product=type VII secretion system ESX-1 target PPE68;protein_id=WP_003399879.1;transl_table=11 NZ_KK316829.1 RefSeq gene 409424 409726 . + . ID=gene-AL55_RS24395;Name=esxB;gbkey=Gene;gene=esxB;gene_biotype=protein_coding;locus_tag=AL55_RS24395;old_locus_tag=AL55_03861 NZ_KK316829.1 Protein Homology CDS 409424 409726 . + 0 ID=cds-WP_003399940.1;Parent=gene-AL55_RS24395;Dbxref=GenBank:WP_003399940.1;Name=WP_003399940.1;gbkey=CDS;gene=esxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218391.1;locus_tag=AL55_RS24395;product=type VII secretion system ESX-1 WXG100 family target CFP-10;protein_id=WP_003399940.1;transl_table=11 NZ_KK316829.1 RefSeq gene 409759 410046 . + . ID=gene-AL55_RS24400;Name=esxA;gbkey=Gene;gene=esxA;gene_biotype=protein_coding;locus_tag=AL55_RS24400;old_locus_tag=AL55_03862 NZ_KK316829.1 Protein Homology CDS 409759 410046 . + 0 ID=cds-WP_003399963.1;Parent=gene-AL55_RS24400;Dbxref=GenBank:WP_003399963.1;Name=WP_003399963.1;gbkey=CDS;gene=esxA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178023.1;locus_tag=AL55_RS24400;product=type VII secretion system ESX-1 WXG100 family target ESAT-6;protein_id=WP_003399963.1;transl_table=11 NZ_KK316829.1 RefSeq gene 410160 412160 . + . ID=gene-AL55_RS24405;Name=espI;gbkey=Gene;gene=espI;gene_biotype=protein_coding;locus_tag=AL55_RS24405;old_locus_tag=AL55_03863 NZ_KK316829.1 Protein Homology CDS 410160 412160 . + 0 ID=cds-WP_003909105.1;Parent=gene-AL55_RS24405;Dbxref=GenBank:WP_003909105.1;Name=WP_003909105.1;gbkey=CDS;gene=espI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218393.1;locus_tag=AL55_RS24405;product=type VII secretion system ESX-1 associated protein EspI;protein_id=WP_003909105.1;transl_table=11 NZ_KK316829.1 RefSeq gene 412157 413692 . + . ID=gene-AL55_RS24410;Name=eccD1;gbkey=Gene;gene=eccD1;gene_biotype=protein_coding;locus_tag=AL55_RS24410;old_locus_tag=AL55_03864 NZ_KK316829.1 Protein Homology CDS 412157 413692 . + 0 ID=cds-WP_003399976.1;Parent=gene-AL55_RS24410;Dbxref=GenBank:WP_003399976.1;Name=WP_003399976.1;gbkey=CDS;gene=eccD1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218394.1;locus_tag=AL55_RS24410;product=type VII secretion system ESX-1 subunit EccD1;protein_id=WP_003399976.1;transl_table=11 NZ_KK316829.1 RefSeq gene 413843 414685 . + . ID=gene-AL55_RS24415;Name=espJ;gbkey=Gene;gene=espJ;gene_biotype=protein_coding;locus_tag=AL55_RS24415;old_locus_tag=AL55_03865 NZ_KK316829.1 Protein Homology CDS 413843 414685 . + 0 ID=cds-WP_003901751.1;Parent=gene-AL55_RS24415;Dbxref=GenBank:WP_003901751.1;Name=WP_003901751.1;gbkey=CDS;gene=espJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218395.1;locus_tag=AL55_RS24415;product=type VII secretion system ESX-1 associated protein EspJ;protein_id=WP_003901751.1;transl_table=11 NZ_KK316829.1 RefSeq gene 414743 416932 . - . ID=gene-AL55_RS24420;Name=espK;gbkey=Gene;gene=espK;gene_biotype=protein_coding;locus_tag=AL55_RS24420;old_locus_tag=AL55_03866 NZ_KK316829.1 Protein Homology CDS 414743 416932 . - 0 ID=cds-WP_031721895.1;Parent=gene-AL55_RS24420;Dbxref=GenBank:WP_031721895.1;Name=WP_031721895.1;gbkey=CDS;gene=espK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015304039.1;locus_tag=AL55_RS24420;product=type VII secretion system ESX-1 associated protein EspK;protein_id=WP_031721895.1;transl_table=11 NZ_KK316829.1 RefSeq gene 417349 417696 . - . ID=gene-AL55_RS24425;Name=espL;gbkey=Gene;gene=espL;gene_biotype=protein_coding;locus_tag=AL55_RS24425;old_locus_tag=AL55_03867 NZ_KK316829.1 Protein Homology CDS 417349 417696 . - 0 ID=cds-WP_003399988.1;Parent=gene-AL55_RS24425;Dbxref=GenBank:WP_003399988.1;Name=WP_003399988.1;gbkey=CDS;gene=espL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218397.1;locus_tag=AL55_RS24425;product=type VII secretion system ESX-1 associated protein EspL;protein_id=WP_003399988.1;transl_table=11 NZ_KK316829.1 RefSeq gene 417693 419075 . - . ID=gene-AL55_RS24430;Name=espB;gbkey=Gene;gene=espB;gene_biotype=protein_coding;locus_tag=AL55_RS24430;old_locus_tag=AL55_03868 NZ_KK316829.1 Protein Homology CDS 417693 419075 . - 0 ID=cds-WP_003399995.1;Parent=gene-AL55_RS24430;Dbxref=GenBank:WP_003399995.1;Name=WP_003399995.1;gbkey=CDS;gene=espB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218398.1;locus_tag=AL55_RS24430;product=EspB family ESX-1 secretion system-associated protein;protein_id=WP_003399995.1;transl_table=11 NZ_KK316829.1 RefSeq gene 419182 420570 . - . ID=gene-AL55_RS24435;Name=eccE1;gbkey=Gene;gene=eccE1;gene_biotype=protein_coding;locus_tag=AL55_RS24435;old_locus_tag=AL55_03869 NZ_KK316829.1 Protein Homology CDS 419182 420570 . - 0 ID=cds-WP_003400000.1;Parent=gene-AL55_RS24435;Dbxref=GenBank:WP_003400000.1;Name=WP_003400000.1;gbkey=CDS;gene=eccE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218399.1;locus_tag=AL55_RS24435;product=type VII secretion system ESX-1 subunit EccE1;protein_id=WP_003400000.1;transl_table=11 NZ_KK316829.1 RefSeq gene 420567 421907 . - . ID=gene-AL55_RS24440;Name=mycP1;gbkey=Gene;gene=mycP1;gene_biotype=protein_coding;locus_tag=AL55_RS24440;old_locus_tag=AL55_03870 NZ_KK316829.1 Protein Homology CDS 420567 421907 . - 0 ID=cds-WP_003400004.1;Parent=gene-AL55_RS24440;Dbxref=GenBank:WP_003400004.1;Name=WP_003400004.1;gbkey=CDS;gene=mycP1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218400.1;locus_tag=AL55_RS24440;product=type VII secretion system ESX-1 serine protease mycosin MycP1;protein_id=WP_003400004.1;transl_table=11 NZ_KK316829.1 RefSeq gene 422129 423988 . - . ID=gene-AL55_RS24445;Name=eccA2;gbkey=Gene;gene=eccA2;gene_biotype=protein_coding;locus_tag=AL55_RS24445;old_locus_tag=AL55_03871 NZ_KK316829.1 Protein Homology CDS 422129 423988 . - 0 ID=cds-WP_003400005.1;Parent=gene-AL55_RS24445;Dbxref=GenBank:WP_003400005.1;Name=WP_003400005.1;gbkey=CDS;gene=eccA2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218401.1;locus_tag=AL55_RS24445;product=type VII secretion system ESX-2 AAA family ATPase EccA2;protein_id=WP_003400005.1;transl_table=11 NZ_KK316829.1 RefSeq gene 424058 425671 . - . ID=gene-AL55_RS24450;Name=eccE2;gbkey=Gene;gene=eccE2;gene_biotype=protein_coding;locus_tag=AL55_RS24450;old_locus_tag=AL55_03872 NZ_KK316829.1 Protein Homology CDS 424058 425671 . - 0 ID=cds-WP_003902572.1;Parent=gene-AL55_RS24450;Dbxref=GenBank:WP_003902572.1;Name=WP_003902572.1;gbkey=CDS;gene=eccE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218402.1;locus_tag=AL55_RS24450;product=type VII secretion system ESX-2 subunit EccE2;protein_id=WP_003902572.1;transl_table=11 NZ_KK316829.1 RefSeq gene 425668 427320 . - . ID=gene-AL55_RS24455;Name=mycP2;gbkey=Gene;gene=mycP2;gene_biotype=protein_coding;locus_tag=AL55_RS24455;old_locus_tag=AL55_03873 NZ_KK316829.1 Protein Homology CDS 425668 427320 . - 0 ID=cds-WP_003400012.1;Parent=gene-AL55_RS24455;Dbxref=GenBank:WP_003400012.1;Name=WP_003400012.1;gbkey=CDS;gene=mycP2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218403.1;locus_tag=AL55_RS24455;product=type VII secretion system ESX-2 serine protease mycosin MycP2;protein_id=WP_003400012.1;transl_table=11 NZ_KK316829.1 RefSeq gene 427305 428834 . - . ID=gene-AL55_RS24460;Name=eccD2;gbkey=Gene;gene=eccD2;gene_biotype=protein_coding;locus_tag=AL55_RS24460;old_locus_tag=AL55_03874 NZ_KK316829.1 Protein Homology CDS 427305 428834 . - 0 ID=cds-WP_003900775.1;Parent=gene-AL55_RS24460;Dbxref=GenBank:WP_003900775.1;Name=WP_003900775.1;gbkey=CDS;gene=eccD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218404.1;locus_tag=AL55_RS24460;product=type VII secretion system ESX-2 subunit EccD2;protein_id=WP_003900775.1;transl_table=11 NZ_KK316829.1 RefSeq gene 428831 429856 . - . ID=gene-AL55_RS24465;Name=AL55_RS24465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24465;old_locus_tag=AL55_03875 NZ_KK316829.1 Protein Homology CDS 428831 429856 . - 0 ID=cds-WP_003899748.1;Parent=gene-AL55_RS24465;Dbxref=GenBank:WP_003899748.1;Name=WP_003899748.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218405.1;locus_tag=AL55_RS24465;product=MinD/ParA family ATP-binding protein;protein_id=WP_003899748.1;transl_table=11 NZ_KK316829.1 RefSeq gene 429950 430780 . - . ID=gene-AL55_RS24470;Name=espG2;gbkey=Gene;gene=espG2;gene_biotype=protein_coding;locus_tag=AL55_RS24470;old_locus_tag=AL55_03876 NZ_KK316829.1 Protein Homology CDS 429950 430780 . - 0 ID=cds-WP_003400028.1;Parent=gene-AL55_RS24470;Dbxref=GenBank:WP_003400028.1;Name=WP_003400028.1;gbkey=CDS;gene=espG2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218406.1;locus_tag=AL55_RS24470;product=type VII secretion system ESX-2 associated protein EspG2;protein_id=WP_003400028.1;transl_table=11 NZ_KK316829.1 RefSeq gene 430876 431163 . - . ID=gene-AL55_RS24475;Name=esxC;gbkey=Gene;gene=esxC;gene_biotype=protein_coding;locus_tag=AL55_RS24475;old_locus_tag=AL55_03877 NZ_KK316829.1 Protein Homology CDS 430876 431163 . - 0 ID=cds-WP_003899750.1;Parent=gene-AL55_RS24475;Dbxref=GenBank:WP_003899750.1;Name=WP_003899750.1;Ontology_term=GO:0005576;gbkey=CDS;gene=esxC;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218407.1;locus_tag=AL55_RS24475;product=WXG100 family type VII secretion target;protein_id=WP_003899750.1;transl_table=11 NZ_KK316829.1 RefSeq gene 431199 431522 . - . ID=gene-AL55_RS24480;Name=esxD;gbkey=Gene;gene=esxD;gene_biotype=protein_coding;locus_tag=AL55_RS24480;old_locus_tag=AL55_03878 NZ_KK316829.1 Protein Homology CDS 431199 431522 . - 0 ID=cds-WP_003899751.1;Parent=gene-AL55_RS24480;Dbxref=GenBank:WP_003899751.1;Name=WP_003899751.1;Ontology_term=GO:0005576;gbkey=CDS;gene=esxD;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218408.1;locus_tag=AL55_RS24480;product=WXG100 family type VII secretion target;protein_id=WP_003899751.1;transl_table=11 NZ_KK316829.1 RefSeq gene 431634 432833 . - . ID=gene-AL55_RS24485;Name=AL55_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24485;old_locus_tag=AL55_03879 NZ_KK316829.1 Protein Homology CDS 431634 432833 . - 0 ID=cds-WP_003899752.1;Parent=gene-AL55_RS24485;Dbxref=GenBank:WP_003899752.1;Name=WP_003899752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178024.1;locus_tag=AL55_RS24485;product=PPE family protein;protein_id=WP_003899752.1;transl_table=11 NZ_KK316829.1 RefSeq gene 432912 433145 . - . ID=gene-AL55_RS24490;Name=AL55_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24490;old_locus_tag=AL55_03880 NZ_KK316829.1 Protein Homology CDS 432912 433145 . - 0 ID=cds-WP_003400047.1;Parent=gene-AL55_RS24490;Dbxref=GenBank:WP_003400047.1;Name=WP_003400047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178025.1;locus_tag=AL55_RS24490;product=PE domain-containing protein;protein_id=WP_003400047.1;transl_table=11 NZ_KK316829.1 RefSeq gene 433224 433388 . - . ID=gene-AL55_RS27425;Name=AL55_RS27425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27425 NZ_KK316829.1 Protein Homology CDS 433224 433388 . - 0 ID=cds-WP_003400054.1;Parent=gene-AL55_RS27425;Dbxref=GenBank:WP_003400054.1;Name=WP_003400054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400054.1;locus_tag=AL55_RS27425;product=hypothetical protein;protein_id=WP_003400054.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 433412 437601 . - . ID=gene-AL55_RS26715;Name=eccC2;gbkey=Gene;gene=eccC2;gene_biotype=pseudogene;locus_tag=AL55_RS26715;pseudo=true NZ_KK316829.1 Protein Homology CDS 433412 437601 . - 0 ID=cds-AL55_RS26715;Parent=gene-AL55_RS26715;Note=frameshifted;gbkey=CDS;gene=eccC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218411.1;locus_tag=AL55_RS26715;product=type VII secretion system ESX-2 FtsK/SpoIIIE family ATPase EccC2;pseudo=true;transl_table=11 NZ_KK316829.1 RefSeq gene 437602 439089 . - . ID=gene-AL55_RS24500;Name=eccB2;gbkey=Gene;gene=eccB2;gene_biotype=protein_coding;locus_tag=AL55_RS24500;old_locus_tag=AL55_03882 NZ_KK316829.1 Protein Homology CDS 437602 439089 . - 0 ID=cds-WP_003400065.1;Parent=gene-AL55_RS24500;Dbxref=GenBank:WP_003400065.1;Name=WP_003400065.1;gbkey=CDS;gene=eccB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218412.1;locus_tag=AL55_RS24500;product=type VII secretion system ESX-2 subunit EccB2;protein_id=WP_003400065.1;transl_table=11 NZ_KK316829.1 RefSeq gene 439092 440000 . - . ID=gene-AL55_RS24505;Name=AL55_RS24505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24505;old_locus_tag=AL55_03883 NZ_KK316829.1 Protein Homology CDS 439092 440000 . - 0 ID=cds-WP_003899753.1;Parent=gene-AL55_RS24505;Dbxref=GenBank:WP_003899753.1;Name=WP_003899753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218413.1;locus_tag=AL55_RS24505;product=transglycosylase SLT domain-containing protein;protein_id=WP_003899753.1;transl_table=11 NZ_KK316829.1 RefSeq pseudogene 440810 441139 . - . ID=gene-AL55_RS27855;Name=AL55_RS27855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27855;old_locus_tag=AL55_03885;partial=true;pseudo=true;start_range=.,440810 NZ_KK316829.1 Protein Homology CDS 440810 441139 . - 0 ID=cds-AL55_RS27855;Parent=gene-AL55_RS27855;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218415.1;locus_tag=AL55_RS27855;partial=true;product=hypothetical protein;pseudo=true;start_range=.,440810;transl_table=11 NZ_KK316829.1 RefSeq gene 441301 442479 . - . ID=gene-AL55_RS27860;Name=AL55_RS27860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27860;old_locus_tag=AL55_03886 NZ_KK316829.1 Protein Homology CDS 441301 442479 . - 0 ID=cds-WP_003917986.1;Parent=gene-AL55_RS27860;Dbxref=GenBank:WP_003917986.1;Name=WP_003917986.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037368.6;locus_tag=AL55_RS27860;product=DUF5631 domain-containing protein;protein_id=WP_003917986.1;transl_table=11 NZ_KK316829.1 RefSeq gene 442527 443462 . - . ID=gene-AL55_RS27865;Name=AL55_RS27865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27865;old_locus_tag=AL55_03887 NZ_KK316829.1 Protein Homology CDS 442527 443462 . - 0 ID=cds-WP_003899756.1;Parent=gene-AL55_RS27865;Dbxref=GenBank:WP_003899756.1;Name=WP_003899756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218417.1;locus_tag=AL55_RS27865;product=hypothetical protein;protein_id=WP_003899756.1;transl_table=11 NZ_KK316829.1 RefSeq gene 443519 443968 . - . ID=gene-AL55_RS24520;Name=AL55_RS24520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24520;old_locus_tag=AL55_03888 NZ_KK316829.1 Protein Homology CDS 443519 443968 . - 0 ID=cds-WP_003400081.1;Parent=gene-AL55_RS24520;Dbxref=GenBank:WP_003400081.1;Name=WP_003400081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218418.1;locus_tag=AL55_RS24520;product=hypothetical protein;protein_id=WP_003400081.1;transl_table=11 NZ_KK316829.1 RefSeq gene 443956 444141 . + . ID=gene-AL55_RS27435;Name=AL55_RS27435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27435 NZ_KK316829.1 Protein Homology CDS 443956 444141 . + 0 ID=cds-WP_003899758.1;Parent=gene-AL55_RS27435;Dbxref=GenBank:WP_003899758.1;Name=WP_003899758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899758.1;locus_tag=AL55_RS27435;product=hypothetical protein;protein_id=WP_003899758.1;transl_table=11 NZ_KK316829.1 RefSeq gene 444519 445049 . - . ID=gene-AL55_RS24525;Name=ift;gbkey=Gene;gene=ift;gene_biotype=protein_coding;locus_tag=AL55_RS24525;old_locus_tag=AL55_03889 NZ_KK316829.1 Protein Homology CDS 444519 445049 . - 0 ID=cds-WP_003400086.1;Parent=gene-AL55_RS24525;Dbxref=GenBank:WP_003400086.1;Name=WP_003400086.1;gbkey=CDS;gene=ift;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218419.1;locus_tag=AL55_RS24525;product=necrotizing toxin immunity factor IFT;protein_id=WP_003400086.1;transl_table=11 NZ_KK316829.1 RefSeq gene 445046 447586 . - . ID=gene-AL55_RS24530;Name=cpnT;gbkey=Gene;gene=cpnT;gene_biotype=protein_coding;locus_tag=AL55_RS24530;old_locus_tag=AL55_03890 NZ_KK316829.1 Protein Homology CDS 445046 447586 . - 0 ID=cds-WP_003899759.1;Parent=gene-AL55_RS24530;Dbxref=GenBank:WP_003899759.1;Name=WP_003899759.1;gbkey=CDS;gene=cpnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218420.1;locus_tag=AL55_RS24530;product=outer membrane channel protein/necrotizing toxin glycohydrolase CpnT;protein_id=WP_003899759.1;transl_table=11 NZ_KK316829.1 RefSeq gene 447591 447863 . - . ID=gene-AL55_RS24535;Name=esxE;gbkey=Gene;gene=esxE;gene_biotype=protein_coding;locus_tag=AL55_RS24535;old_locus_tag=AL55_03891 NZ_KK316829.1 Protein Homology CDS 447591 447863 . - 0 ID=cds-WP_003400094.1;Parent=gene-AL55_RS24535;Dbxref=GenBank:WP_003400094.1;Name=WP_003400094.1;gbkey=CDS;gene=esxE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400094.1;locus_tag=AL55_RS24535;product=pore-forming CpnT exporter EsxE;protein_id=WP_003400094.1;transl_table=11 NZ_KK316829.1 RefSeq gene 447874 448185 . - . ID=gene-AL55_RS24540;Name=esxF;gbkey=Gene;gene=esxF;gene_biotype=protein_coding;locus_tag=AL55_RS24540;old_locus_tag=AL55_03892 NZ_KK316829.1 Protein Homology CDS 447874 448185 . - 0 ID=cds-WP_003400100.1;Parent=gene-AL55_RS24540;Dbxref=GenBank:WP_003400100.1;Name=WP_003400100.1;gbkey=CDS;gene=esxF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218422.1;locus_tag=AL55_RS24540;product=pore-forming CpnT exporter EsxF;protein_id=WP_003400100.1;transl_table=11 NZ_KK316829.1 RefSeq gene 448251 448760 . - . ID=gene-AL55_RS24545;Name=AL55_RS24545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24545;old_locus_tag=AL55_03893 NZ_KK316829.1 Protein Homology CDS 448251 448760 . - 0 ID=cds-WP_003400109.1;Parent=gene-AL55_RS24545;Dbxref=GenBank:WP_003400109.1;Name=WP_003400109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218423.1;locus_tag=AL55_RS24545;product=hypothetical protein;protein_id=WP_003400109.1;transl_table=11 NZ_KK316829.1 RefSeq gene 448785 450227 . - . ID=gene-AL55_RS24550;Name=pcnA;gbkey=Gene;gene=pcnA;gene_biotype=protein_coding;locus_tag=AL55_RS24550;old_locus_tag=AL55_03894 NZ_KK316829.1 Protein Homology CDS 448785 450227 . - 0 ID=cds-WP_003400120.1;Parent=gene-AL55_RS24550;Dbxref=GenBank:WP_003400120.1;Name=WP_003400120.1;Ontology_term=GO:0006396,GO:0003723,GO:0016779;gbkey=CDS;gene=pcnA;go_function=RNA binding|0003723||IEA,nucleotidyltransferase activity|0016779||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178026.1;locus_tag=AL55_RS24550;product=CCA tRNA nucleotidyltransferase;protein_id=WP_003400120.1;transl_table=11 NZ_KK316829.1 RefSeq gene 450603 451349 . + . ID=gene-AL55_RS24555;Name=AL55_RS24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24555;old_locus_tag=AL55_03895 NZ_KK316829.1 Protein Homology CDS 450603 451349 . + 0 ID=cds-WP_003906260.1;Parent=gene-AL55_RS24555;Dbxref=GenBank:WP_003906260.1;Name=WP_003906260.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218425.1;locus_tag=AL55_RS24555;product=NUDIX hydrolase;protein_id=WP_003906260.1;transl_table=11 NZ_KK316829.1 RefSeq gene 451346 453754 . + . ID=gene-AL55_RS24560;Name=AL55_RS24560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24560;old_locus_tag=AL55_03896 NZ_KK316829.1 Protein Homology CDS 451346 453754 . + 0 ID=cds-WP_003900781.1;Parent=gene-AL55_RS24560;Dbxref=GenBank:WP_003900781.1;Name=WP_003900781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218426.1;locus_tag=AL55_RS24560;product=DUF6049 family protein;protein_id=WP_003900781.1;transl_table=11 NZ_KK316829.1 RefSeq gene 453751 457305 . + . ID=gene-AL55_RS24565;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=AL55_RS24565;old_locus_tag=AL55_03897 NZ_KK316829.1 Protein Homology CDS 453751 457305 . + 0 ID=cds-WP_003902580.1;Parent=gene-AL55_RS24565;Dbxref=GenBank:WP_003902580.1;Name=WP_003902580.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218427.1;locus_tag=AL55_RS24565;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_003902580.1;transl_table=11 NZ_KK316829.1 RefSeq gene 457340 457930 . + . ID=gene-AL55_RS24570;Name=sigM;gbkey=Gene;gene=sigM;gene_biotype=protein_coding;locus_tag=AL55_RS24570;old_locus_tag=AL55_03898 NZ_KK316829.1 Protein Homology CDS 457340 457930 . + 0 ID=cds-WP_003400144.1;Parent=gene-AL55_RS24570;Dbxref=GenBank:WP_003400144.1;Name=WP_003400144.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=sigM;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917992.1;locus_tag=AL55_RS24570;product=RNA polymerase sigma factor SigM;protein_id=WP_003400144.1;transl_table=11 NZ_KK316829.1 RefSeq gene 458023 458787 . + . ID=gene-AL55_RS24575;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AL55_RS24575;old_locus_tag=AL55_03899 NZ_KK316829.1 Protein Homology CDS 458023 458787 . + 0 ID=cds-WP_003400148.1;Parent=gene-AL55_RS24575;Dbxref=GenBank:WP_003400148.1;Name=WP_003400148.1;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218429.1;locus_tag=AL55_RS24575;product=anti-sigma-M factor RsmA;protein_id=WP_003400148.1;transl_table=11 NZ_KK316829.1 RefSeq gene 458881 459888 . + . ID=gene-AL55_RS24580;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=AL55_RS24580;old_locus_tag=AL55_03900 NZ_KK316829.1 Protein Homology CDS 458881 459888 . + 0 ID=cds-WP_003900782.1;Parent=gene-AL55_RS24580;Dbxref=GenBank:WP_003900782.1;Name=WP_003900782.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218430.1;locus_tag=AL55_RS24580;product=thioredoxin-disulfide reductase;protein_id=WP_003900782.1;transl_table=11 NZ_KK316829.1 RefSeq gene 459885 460235 . + . ID=gene-AL55_RS24585;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AL55_RS24585;old_locus_tag=AL55_03901 NZ_KK316829.1 Protein Homology CDS 459885 460235 . + 0 ID=cds-WP_003400164.1;Parent=gene-AL55_RS24585;Dbxref=GenBank:WP_003400164.1;Name=WP_003400164.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218431.1;locus_tag=AL55_RS24585;product=thioredoxin;protein_id=WP_003400164.1;transl_table=11 NZ_KK316829.1 RefSeq gene 460345 461565 . + . ID=gene-AL55_RS24590;Name=cwlM;gbkey=Gene;gene=cwlM;gene_biotype=protein_coding;locus_tag=AL55_RS24590;old_locus_tag=AL55_03902 NZ_KK316829.1 Protein Homology CDS 460345 461565 . + 0 ID=cds-WP_003400168.1;Parent=gene-AL55_RS24590;Dbxref=GenBank:WP_003400168.1;Name=WP_003400168.1;gbkey=CDS;gene=cwlM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178027.1;locus_tag=AL55_RS24590;product=N-acetylmuramoyl-L-alanine amidase CwlM;protein_id=WP_003400168.1;transl_table=11 NZ_KK316829.1 RefSeq gene 461586 462320 . - . ID=gene-AL55_RS24595;Name=AL55_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24595;old_locus_tag=AL55_03903 NZ_KK316829.1 Protein Homology CDS 461586 462320 . - 0 ID=cds-WP_003400171.1;Parent=gene-AL55_RS24595;Dbxref=GenBank:WP_003400171.1;Name=WP_003400171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218433.1;locus_tag=AL55_RS24595;product=hypothetical protein;protein_id=WP_003400171.1;transl_table=11 NZ_KK316829.1 RefSeq gene 462610 463644 . - . ID=gene-AL55_RS24600;Name=parB;gbkey=Gene;gene=parB;gene_biotype=protein_coding;locus_tag=AL55_RS24600;old_locus_tag=AL55_03904 NZ_KK316829.1 Protein Homology CDS 462610 463644 . - 0 ID=cds-WP_003400175.1;Parent=gene-AL55_RS24600;Dbxref=GenBank:WP_003400175.1;Name=WP_003400175.1;Ontology_term=GO:0003677;gbkey=CDS;gene=parB;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218435.2;locus_tag=AL55_RS24600;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_003400175.1;transl_table=11 NZ_KK316829.1 RefSeq gene 463641 464684 . - . ID=gene-AL55_RS24605;Name=parA;gbkey=Gene;gene=parA;gene_biotype=protein_coding;locus_tag=AL55_RS24605;old_locus_tag=AL55_03905 NZ_KK316829.1 Protein Homology CDS 463641 464684 . - 0 ID=cds-WP_003400180.1;Parent=gene-AL55_RS24605;Dbxref=GenBank:WP_003400180.1;Name=WP_003400180.1;gbkey=CDS;gene=parA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218434.2;locus_tag=AL55_RS24605;product=chromosome partitioning protein ParA;protein_id=WP_003400180.1;transl_table=11 NZ_KK316829.1 RefSeq gene 464681 465355 . - . ID=gene-AL55_RS24610;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=AL55_RS24610;old_locus_tag=AL55_03906 NZ_KK316829.1 Protein Homology CDS 464681 465355 . - 0 ID=cds-WP_031695464.1;Parent=gene-AL55_RS24610;Dbxref=GenBank:WP_031695464.1;Name=WP_031695464.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218436.2;locus_tag=AL55_RS24610;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_031695464.1;transl_table=11 NZ_KK316829.1 RefSeq gene 465487 466050 . - . ID=gene-AL55_RS24615;Name=AL55_RS24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24615;old_locus_tag=AL55_03907 NZ_KK316829.1 Protein Homology CDS 465487 466050 . - 0 ID=cds-WP_003899764.1;Parent=gene-AL55_RS24615;Dbxref=GenBank:WP_003899764.1;Name=WP_003899764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218437.1;locus_tag=AL55_RS24615;product=Jag family protein;protein_id=WP_003899764.1;transl_table=11 NZ_KK316829.1 RefSeq gene 466122 467222 . - . ID=gene-AL55_RS24620;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=AL55_RS24620;old_locus_tag=AL55_03908 NZ_KK316829.1 Protein Homology CDS 466122 467222 . - 0 ID=cds-WP_003899765.1;Parent=gene-AL55_RS24620;Dbxref=GenBank:WP_003899765.1;Name=WP_003899765.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218438.1;locus_tag=AL55_RS24620;product=membrane protein insertase YidC;protein_id=WP_003899765.1;transl_table=11 NZ_KK316829.1 RefSeq gene 467206 467568 . - . ID=gene-AL55_RS24625;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=AL55_RS24625;old_locus_tag=AL55_03909 NZ_KK316829.1 Protein Homology CDS 467206 467568 . - 0 ID=cds-WP_003899766.1;Parent=gene-AL55_RS24625;Dbxref=GenBank:WP_003899766.1;Name=WP_003899766.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218439.1;locus_tag=AL55_RS24625;product=membrane protein insertion efficiency factor YidD;protein_id=WP_003899766.1;transl_table=11 NZ_KK316829.1 RefSeq gene 467565 467915 . - . ID=gene-AL55_RS24630;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AL55_RS24630;old_locus_tag=AL55_03910 NZ_KK316829.1 Protein Homology CDS 467565 467915 . - 0 ID=cds-WP_003899767.1;Parent=gene-AL55_RS24630;Dbxref=GenBank:WP_003899767.1;Name=WP_003899767.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950319.1;locus_tag=AL55_RS24630;product=ribonuclease P protein component;protein_id=WP_003899767.1;transl_table=11 NZ_KK316829.1 RefSeq gene 467939 468082 . - . ID=gene-AL55_RS24635;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AL55_RS24635;old_locus_tag=AL55_03911 NZ_KK316829.1 Protein Homology CDS 467939 468082 . - 0 ID=cds-WP_003400206.1;Parent=gene-AL55_RS24635;Dbxref=GenBank:WP_003400206.1;Name=WP_003400206.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005263481.1;locus_tag=AL55_RS24635;product=50S ribosomal protein L34;protein_id=WP_003400206.1;transl_table=11 ##sequence-region NZ_KK316830.1 1 194150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448434 NZ_KK316830.1 RefSeq region 1 194150 . + . ID=NZ_KK316830.1:1..194150;Dbxref=taxon:1448434;collection-date=2013-04-16;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0100 NZ_KK316830.1 RefSeq gene 1 2165 . - . ID=gene-AL55_RS0105740;Name=AL55_RS0105740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105740;partial=true;start_range=.,1 NZ_KK316830.1 Protein Homology CDS 1 2165 . - 0 ID=cds-WP_151845148.1;Parent=gene-AL55_RS0105740;Dbxref=GenBank:WP_151845148.1;Name=WP_151845148.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177962.1;locus_tag=AL55_RS0105740;partial=true;product=PE family protein;protein_id=WP_151845148.1;start_range=.,1;transl_table=11 NZ_KK316830.1 RefSeq gene 2589 2846 . - . ID=gene-AL55_RS24640;Name=AL55_RS24640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24640;old_locus_tag=AL55_03912 NZ_KK316830.1 Protein Homology CDS 2589 2846 . - 0 ID=cds-WP_003417619.1;Parent=gene-AL55_RS24640;Dbxref=GenBank:WP_003417619.1;Name=WP_003417619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217863.1;locus_tag=AL55_RS24640;product=DUF3017 domain-containing protein;protein_id=WP_003417619.1;transl_table=11 NZ_KK316830.1 RefSeq gene 3102 12575 . - . ID=gene-AL55_RS24645;Name=AL55_RS24645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24645;old_locus_tag=AL55_03913 NZ_KK316830.1 Protein Homology CDS 3102 12575 . - 0 ID=cds-WP_003901612.1;Parent=gene-AL55_RS24645;Dbxref=GenBank:WP_003901612.1;Name=WP_003901612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177963.1;locus_tag=AL55_RS24645;product=PPE family protein;protein_id=WP_003901612.1;transl_table=11 NZ_KK316830.1 RefSeq gene 13156 13647 . + . ID=gene-AL55_RS24650;Name=AL55_RS24650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24650;old_locus_tag=AL55_03914 NZ_KK316830.1 Protein Homology CDS 13156 13647 . + 0 ID=cds-WP_003422266.1-2;Parent=gene-AL55_RS24650;Dbxref=GenBank:WP_003422266.1;Name=WP_003422266.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013698.7;locus_tag=AL55_RS24650;product=IS110 family transposase;protein_id=WP_003422266.1;transl_table=11 NZ_KK316830.1 RefSeq pseudogene 13662 13751 . + . ID=gene-AL55_RS27870;Name=AL55_RS27870;end_range=13751,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27870;partial=true;pseudo=true NZ_KK316830.1 Protein Homology CDS 13662 13751 . + 0 ID=cds-AL55_RS27870;Parent=gene-AL55_RS27870;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=13751,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218362.1;locus_tag=AL55_RS27870;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_KK316830.1 RefSeq pseudogene 14149 14502 . - . ID=gene-AL55_RS27875;Name=AL55_RS27875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27875;partial=true;pseudo=true;start_range=.,14149 NZ_KK316830.1 Protein Homology CDS 14149 14502 . - 0 ID=cds-AL55_RS27875;Parent=gene-AL55_RS27875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013753.6;locus_tag=AL55_RS27875;partial=true;product=transposase;pseudo=true;start_range=.,14149;transl_table=11 NZ_KK316830.1 RefSeq gene 14719 15006 . - . ID=gene-AL55_RS0105745;Name=AL55_RS0105745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105745 NZ_KK316830.1 Protein Homology CDS 14719 15006 . - 0 ID=cds-WP_009938650.1;Parent=gene-AL55_RS0105745;Dbxref=GenBank:WP_009938650.1;Name=WP_009938650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938650.1;locus_tag=AL55_RS0105745;product=hypothetical protein;protein_id=WP_009938650.1;transl_table=11 NZ_KK316830.1 RefSeq pseudogene 15343 26492 . - . ID=gene-AL55_RS27150;Name=AL55_RS27150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27150;pseudo=true NZ_KK316830.1 Protein Homology CDS 15343 26492 . - 0 ID=cds-AL55_RS27150;Parent=gene-AL55_RS27150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177964.1;locus_tag=AL55_RS27150;product=PPE domain-containing protein;pseudo=true;transl_table=11 NZ_KK316830.1 RefSeq gene 26736 27425 . - . ID=gene-AL55_RS27880;Name=AL55_RS27880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27880;old_locus_tag=AL55_03917 NZ_KK316830.1 Protein Homology CDS 26736 27425 . - 0 ID=cds-WP_003917774.1;Parent=gene-AL55_RS27880;Dbxref=GenBank:WP_003917774.1;Name=WP_003917774.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF019643.6;locus_tag=AL55_RS27880;product=BBE domain-containing protein;protein_id=WP_003917774.1;transl_table=11 NZ_KK316830.1 RefSeq pseudogene 27612 28099 . - . ID=gene-AL55_RS27885;Name=AL55_RS27885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27885;old_locus_tag=AL55_03918;pseudo=true NZ_KK316830.1 Protein Homology CDS 27612 28099 . - 0 ID=cds-AL55_RS27885;Parent=gene-AL55_RS27885;Note=frameshifted;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF013714.6;locus_tag=AL55_RS27885;product=FAD-binding protein;pseudo=true;transl_table=11 NZ_KK316830.1 RefSeq gene 28126 28386 . - . ID=gene-AL55_RS27895;Name=AL55_RS27895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27895;old_locus_tag=AL55_03919 NZ_KK316830.1 Protein Homology CDS 28126 28386 . - 0 ID=cds-WP_003417741.1;Parent=gene-AL55_RS27895;Dbxref=GenBank:WP_003417741.1;Name=WP_003417741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217870.2;locus_tag=AL55_RS27895;product=hypothetical protein;protein_id=WP_003417741.1;transl_table=11 NZ_KK316830.1 RefSeq gene 28501 28890 . + . ID=gene-AL55_RS24675;Name=AL55_RS24675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24675;old_locus_tag=AL55_03920 NZ_KK316830.1 Protein Homology CDS 28501 28890 . + 0 ID=cds-WP_003417745.1;Parent=gene-AL55_RS24675;Dbxref=GenBank:WP_003417745.1;Name=WP_003417745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217871.1;locus_tag=AL55_RS24675;product=DUF732 domain-containing protein;protein_id=WP_003417745.1;transl_table=11 NZ_KK316830.1 RefSeq gene 28904 29197 . - . ID=gene-AL55_RS24680;Name=AL55_RS24680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24680;old_locus_tag=AL55_03921 NZ_KK316830.1 Protein Homology CDS 28904 29197 . - 0 ID=cds-WP_003417749.1;Parent=gene-AL55_RS24680;Dbxref=GenBank:WP_003417749.1;Name=WP_003417749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217872.1;locus_tag=AL55_RS24680;product=DUF3017 domain-containing protein;protein_id=WP_003417749.1;transl_table=11 NZ_KK316830.1 RefSeq gene 29194 30039 . - . ID=gene-AL55_RS24685;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=AL55_RS24685;old_locus_tag=AL55_03922 NZ_KK316830.1 Protein Homology CDS 29194 30039 . - 0 ID=cds-WP_003417751.1;Parent=gene-AL55_RS24685;Dbxref=GenBank:WP_003417751.1;Name=WP_003417751.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015354771.1;locus_tag=AL55_RS24685;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=WP_003417751.1;transl_table=11 NZ_KK316830.1 RefSeq gene 30163 30438 . + . ID=gene-AL55_RS24690;Name=relJ;gbkey=Gene;gene=relJ;gene_biotype=protein_coding;locus_tag=AL55_RS24690;old_locus_tag=AL55_03923 NZ_KK316830.1 Protein Homology CDS 30163 30438 . + 0 ID=cds-WP_003417757.1;Parent=gene-AL55_RS24690;Dbxref=GenBank:WP_003417757.1;Name=WP_003417757.1;gbkey=CDS;gene=relJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217874.1;locus_tag=AL55_RS24690;product=type II toxin-antitoxin system antitoxin RelJ;protein_id=WP_003417757.1;transl_table=11 NZ_KK316830.1 RefSeq gene 30435 30692 . + . ID=gene-AL55_RS24695;Name=relK;gbkey=Gene;gene=relK;gene_biotype=protein_coding;locus_tag=AL55_RS24695;old_locus_tag=AL55_03924 NZ_KK316830.1 Protein Homology CDS 30435 30692 . + 0 ID=cds-WP_003417760.1;Parent=gene-AL55_RS24695;Dbxref=GenBank:WP_003417760.1;Name=WP_003417760.1;Ontology_term=GO:0008219;gbkey=CDS;gene=relK;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217875.1;locus_tag=AL55_RS24695;product=Txe/YoeB family addiction module toxin;protein_id=WP_003417760.1;transl_table=11 NZ_KK316830.1 RefSeq gene 30734 31924 . + . ID=gene-AL55_RS24700;Name=AL55_RS24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24700;old_locus_tag=AL55_03925 NZ_KK316830.1 Protein Homology CDS 30734 31924 . + 0 ID=cds-WP_003900033.1;Parent=gene-AL55_RS24700;Dbxref=GenBank:WP_003900033.1;Name=WP_003900033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217876.1;locus_tag=AL55_RS24700;product=NADH:flavin oxidoreductase;protein_id=WP_003900033.1;transl_table=11 NZ_KK316830.1 RefSeq gene 32041 32409 . + . ID=gene-AL55_RS24705;Name=AL55_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24705;old_locus_tag=AL55_03926 NZ_KK316830.1 Protein Homology CDS 32041 32409 . + 0 ID=cds-WP_003417765.1;Parent=gene-AL55_RS24705;Dbxref=GenBank:WP_003417765.1;Name=WP_003417765.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217877.1;locus_tag=AL55_RS24705;product=FHA domain-containing protein;protein_id=WP_003417765.1;transl_table=11 NZ_KK316830.1 RefSeq gene 32406 32957 . - . ID=gene-AL55_RS24710;Name=mfpA;gbkey=Gene;gene=mfpA;gene_biotype=protein_coding;locus_tag=AL55_RS24710;old_locus_tag=AL55_03927 NZ_KK316830.1 Protein Homology CDS 32406 32957 . - 0 ID=cds-WP_003417767.1;Parent=gene-AL55_RS24710;Dbxref=GenBank:WP_003417767.1;Name=WP_003417767.1;gbkey=CDS;gene=mfpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217878.1;locus_tag=AL55_RS24710;product=pentapeptide repeat protein MfpA;protein_id=WP_003417767.1;transl_table=11 NZ_KK316830.1 RefSeq gene 32964 33545 . - . ID=gene-AL55_RS24715;Name=AL55_RS24715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24715;old_locus_tag=AL55_03928 NZ_KK316830.1 Protein Homology CDS 32964 33545 . - 0 ID=cds-WP_003417769.1;Parent=gene-AL55_RS24715;Dbxref=GenBank:WP_003417769.1;Name=WP_003417769.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217879.1;locus_tag=AL55_RS24715;product=GTP-binding protein;protein_id=WP_003417769.1;transl_table=11 NZ_KK316830.1 RefSeq gene 33526 33894 . - . ID=gene-AL55_RS24720;Name=AL55_RS24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24720;old_locus_tag=AL55_03929 NZ_KK316830.1 Protein Homology CDS 33526 33894 . - 0 ID=cds-WP_003417772.1;Parent=gene-AL55_RS24720;Dbxref=GenBank:WP_003417772.1;Name=WP_003417772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217880.1;locus_tag=AL55_RS24720;product=DUF742 domain-containing protein;protein_id=WP_003417772.1;transl_table=11 NZ_KK316830.1 RefSeq gene 33872 34264 . - . ID=gene-AL55_RS24725;Name=AL55_RS24725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24725;old_locus_tag=AL55_03930 NZ_KK316830.1 Protein Homology CDS 33872 34264 . - 0 ID=cds-WP_003417776.1;Parent=gene-AL55_RS24725;Dbxref=GenBank:WP_003417776.1;Name=WP_003417776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217881.1;locus_tag=AL55_RS24725;product=serine protease inhibitor;protein_id=WP_003417776.1;transl_table=11 NZ_KK316830.1 RefSeq gene 34261 36891 . - . ID=gene-AL55_RS24730;Name=AL55_RS24730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24730;old_locus_tag=AL55_03931 NZ_KK316830.1 Protein Homology CDS 34261 36891 . - 0 ID=cds-WP_003901616.1;Parent=gene-AL55_RS24730;Dbxref=GenBank:WP_003901616.1;Name=WP_003901616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217882.1;locus_tag=AL55_RS24730;product=sensor histidine kinase;protein_id=WP_003901616.1;transl_table=11 NZ_KK316830.1 RefSeq gene 37127 37591 . + . ID=gene-AL55_RS24735;Name=spoU;gbkey=Gene;gene=spoU;gene_biotype=protein_coding;locus_tag=AL55_RS24735;old_locus_tag=AL55_03932 NZ_KK316830.1 Protein Homology CDS 37127 37591 . + 0 ID=cds-WP_003901617.1;Parent=gene-AL55_RS24735;Dbxref=GenBank:WP_003901617.1;Name=WP_003901617.1;Ontology_term=GO:0001510,GO:0003723,GO:0008173,GO:0141098,GO:1904047;gbkey=CDS;gene=spoU;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,tRNA (cytidine(34)-2'-O)-methyltransferase activity|0141098||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217883.1;locus_tag=AL55_RS24735;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_003901617.1;transl_table=11 NZ_KK316830.1 RefSeq gene 37958 39733 . + . ID=gene-AL55_RS24740;Name=AL55_RS24740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24740;old_locus_tag=AL55_03933 NZ_KK316830.1 Protein Homology CDS 37958 39733 . + 0 ID=cds-WP_009938654.1;Parent=gene-AL55_RS24740;Dbxref=GenBank:WP_009938654.1;Name=WP_009938654.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177965.1;locus_tag=AL55_RS24740;product=PE family protein;protein_id=WP_009938654.1;transl_table=11 NZ_KK316830.1 RefSeq gene 39734 40378 . - . ID=gene-AL55_RS24745;Name=AL55_RS24745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24745;old_locus_tag=AL55_03934 NZ_KK316830.1 Protein Homology CDS 39734 40378 . - 0 ID=cds-WP_003417881.1;Parent=gene-AL55_RS24745;Dbxref=GenBank:WP_003417881.1;Name=WP_003417881.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217885.1;locus_tag=AL55_RS24745;product=nitroreductase family protein;protein_id=WP_003417881.1;transl_table=11 NZ_KK316830.1 RefSeq gene 40401 40811 . + . ID=gene-AL55_RS24750;Name=AL55_RS24750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24750;old_locus_tag=AL55_03935 NZ_KK316830.1 Protein Homology CDS 40401 40811 . + 0 ID=cds-WP_003912209.1;Parent=gene-AL55_RS24750;Dbxref=GenBank:WP_003912209.1;Name=WP_003912209.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912209.1;locus_tag=AL55_RS24750;product=TIGR03667 family PPOX class F420-dependent oxidoreductase;protein_id=WP_003912209.1;transl_table=11 NZ_KK316830.1 RefSeq gene 40900 44175 . - . ID=gene-AL55_RS24755;Name=dnaE2;gbkey=Gene;gene=dnaE2;gene_biotype=protein_coding;locus_tag=AL55_RS24755;old_locus_tag=AL55_03936 NZ_KK316830.1 Protein Homology CDS 40900 44175 . - 0 ID=cds-WP_003417885.1;Parent=gene-AL55_RS24755;Dbxref=GenBank:WP_003417885.1;Name=WP_003417885.1;gbkey=CDS;gene=dnaE2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003417885.1;locus_tag=AL55_RS24755;product=error-prone DNA polymerase DnaE2;protein_id=WP_003417885.1;transl_table=11 NZ_KK316830.1 RefSeq gene 44331 45671 . + . ID=gene-AL55_RS24760;Name=AL55_RS24760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24760;old_locus_tag=AL55_03937 NZ_KK316830.1 Protein Homology CDS 44331 45671 . + 0 ID=cds-WP_003900036.1;Parent=gene-AL55_RS24760;Dbxref=GenBank:WP_003900036.1;Name=WP_003900036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217888.1;locus_tag=AL55_RS24760;product=diacylglycerol O-acyltransferase;protein_id=WP_003900036.1;transl_table=11 NZ_KK316830.1 RefSeq gene 45713 46888 . + . ID=gene-AL55_RS24765;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AL55_RS24765;old_locus_tag=AL55_03938 NZ_KK316830.1 Protein Homology CDS 45713 46888 . + 0 ID=cds-WP_003417892.1;Parent=gene-AL55_RS24765;Dbxref=GenBank:WP_003417892.1;Name=WP_003417892.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217889.1;locus_tag=AL55_RS24765;product=trehalose-phosphatase;protein_id=WP_003417892.1;transl_table=11 NZ_KK316830.1 RefSeq pseudogene 46942 47031 . + . ID=gene-AL55_RS26755;Name=AL55_RS26755;end_range=47031,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS26755;old_locus_tag=AL55_03939;partial=true;pseudo=true NZ_KK316830.1 Protein Homology CDS 46942 47031 . + 0 ID=cds-AL55_RS26755;Parent=gene-AL55_RS26755;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=47031,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177968.1;locus_tag=AL55_RS26755;partial=true;product=PE domain-containing protein;pseudo=true;transl_table=11 NZ_KK316830.1 RefSeq gene 47140 47766 . + . ID=gene-AL55_RS24770;Name=AL55_RS24770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24770;old_locus_tag=AL55_03940 NZ_KK316830.1 Protein Homology CDS 47140 47766 . + 0 ID=cds-WP_009938655.1;Parent=gene-AL55_RS24770;Dbxref=GenBank:WP_009938655.1;Name=WP_009938655.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF012596.6;locus_tag=AL55_RS24770;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_009938655.1;transl_table=11 NZ_KK316830.1 RefSeq gene 47767 48015 . + . ID=gene-AL55_RS27900;Name=AL55_RS27900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27900;old_locus_tag=AL55_03941 NZ_KK316830.1 Protein Homology CDS 47767 48015 . + 0 ID=cds-WP_003417897.1;Parent=gene-AL55_RS27900;Dbxref=GenBank:WP_003417897.1;Name=WP_003417897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001712.1;locus_tag=AL55_RS27900;product=Clp protease/crotonase-like domain-containing protein;protein_id=WP_003417897.1;transl_table=11 NZ_KK316830.1 RefSeq gene 48020 49447 . + . ID=gene-AL55_RS24780;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;locus_tag=AL55_RS24780;old_locus_tag=AL55_03942 NZ_KK316830.1 Protein Homology CDS 48020 49447 . + 0 ID=cds-WP_003417900.1;Parent=gene-AL55_RS24780;Dbxref=GenBank:WP_003417900.1;Name=WP_003417900.1;Ontology_term=GO:0003824;gbkey=CDS;gene=amiD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217892.1;locus_tag=AL55_RS24780;product=amidase;protein_id=WP_003417900.1;transl_table=11 NZ_KK316830.1 RefSeq gene 49555 50208 . + . ID=gene-AL55_RS24785;Name=AL55_RS24785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24785;old_locus_tag=AL55_03943 NZ_KK316830.1 Protein Homology CDS 49555 50208 . + 0 ID=cds-WP_003417903.1;Parent=gene-AL55_RS24785;Dbxref=GenBank:WP_003417903.1;Name=WP_003417903.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217893.1;locus_tag=AL55_RS24785;product=HAD family hydrolase;protein_id=WP_003417903.1;transl_table=11 NZ_KK316830.1 RefSeq gene 50247 51752 . - . ID=gene-AL55_RS24790;Name=AL55_RS24790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24790;old_locus_tag=AL55_03944 NZ_KK316830.1 Protein Homology CDS 50247 51752 . - 0 ID=cds-WP_003417905.1;Parent=gene-AL55_RS24790;Dbxref=GenBank:WP_003417905.1;Name=WP_003417905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217894.1;locus_tag=AL55_RS24790;product=type B diterpene cyclase;protein_id=WP_003417905.1;transl_table=11 NZ_KK316830.1 RefSeq gene 51757 52647 . - . ID=gene-AL55_RS24795;Name=AL55_RS24795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24795;old_locus_tag=AL55_03945 NZ_KK316830.1 Protein Homology CDS 51757 52647 . - 0 ID=cds-WP_003417908.1;Parent=gene-AL55_RS24795;Dbxref=GenBank:WP_003417908.1;Name=WP_003417908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217895.1;locus_tag=AL55_RS24795;product=diterpene synthase;protein_id=WP_003417908.1;transl_table=11 NZ_KK316830.1 RefSeq gene 52656 54461 . - . ID=gene-AL55_RS24800;Name=AL55_RS24800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24800;old_locus_tag=AL55_03946 NZ_KK316830.1 Protein Homology CDS 52656 54461 . - 0 ID=cds-WP_023644584.1;Parent=gene-AL55_RS24800;Dbxref=GenBank:WP_023644584.1;Name=WP_023644584.1;Ontology_term=GO:0016114,GO:0008661;gbkey=CDS;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950880.1;locus_tag=AL55_RS24800;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_023644584.1;transl_table=11 NZ_KK316830.1 RefSeq gene 54491 55480 . - . ID=gene-AL55_RS24805;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=AL55_RS24805;old_locus_tag=AL55_03947 NZ_KK316830.1 Protein Homology CDS 54491 55480 . - 0 ID=cds-WP_003417912.1;Parent=gene-AL55_RS24805;Dbxref=GenBank:WP_003417912.1;Name=WP_003417912.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177967.1;locus_tag=AL55_RS24805;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_003417912.1;transl_table=11 NZ_KK316830.1 RefSeq pseudogene 55480 55875 . - . ID=gene-AL55_RS0105755;Name=AL55_RS0105755;end_range=55875,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0105755;old_locus_tag=AL55_03948;partial=true;pseudo=true NZ_KK316830.1 Protein Homology CDS 55480 55875 . - 0 ID=cds-AL55_RS0105755;Parent=gene-AL55_RS0105755;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008299;end_range=55875,.;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217900.1;locus_tag=AL55_RS0105755;partial=true;product=polyprenyl synthetase family protein;pseudo=true;transl_table=11 NZ_KK316830.1 RefSeq gene 55922 57183 . + . ID=gene-AL55_RS24815;Name=AL55_RS24815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24815;old_locus_tag=AL55_03950 NZ_KK316830.1 Protein Homology CDS 55922 56210 . + 0 ID=cds-WP_087902221.1-16;Parent=gene-AL55_RS24815;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS24815;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316830.1 Protein Homology CDS 56210 57183 . + 2 ID=cds-WP_087902221.1-16;Parent=gene-AL55_RS24815;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS24815;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316830.1 RefSeq gene 57368 58629 . - . ID=gene-AL55_RS24820;Name=AL55_RS24820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24820;old_locus_tag=AL55_03951 NZ_KK316830.1 Protein Homology CDS 58341 58629 . - 0 ID=cds-WP_087902221.1-17;Parent=gene-AL55_RS24820;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS24820;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316830.1 Protein Homology CDS 57368 58341 . - 2 ID=cds-WP_087902221.1-17;Parent=gene-AL55_RS24820;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS24820;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316830.1 RefSeq gene 59317 59709 . - . ID=gene-AL55_RS24830;Name=AL55_RS24830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24830;old_locus_tag=AL55_03953 NZ_KK316830.1 Protein Homology CDS 59317 59709 . - 0 ID=cds-WP_003417916.1;Parent=gene-AL55_RS24830;Dbxref=GenBank:WP_003417916.1;Name=WP_003417916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217901.1;locus_tag=AL55_RS24830;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003417916.1;transl_table=11 NZ_KK316830.1 RefSeq gene 59709 59984 . - . ID=gene-AL55_RS24835;Name=AL55_RS24835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24835;old_locus_tag=AL55_03954 NZ_KK316830.1 Protein Homology CDS 59709 59984 . - 0 ID=cds-WP_003912214.1;Parent=gene-AL55_RS24835;Dbxref=GenBank:WP_003912214.1;Name=WP_003912214.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912214.1;locus_tag=AL55_RS24835;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003912214.1;transl_table=11 NZ_KK316830.1 RefSeq pseudogene 60166 61537 . + . ID=gene-AL55_RS26760;Name=AL55_RS26760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS26760;pseudo=true NZ_KK316830.1 Protein Homology CDS 60166 61537 . + 0 ID=cds-AL55_RS26760;Parent=gene-AL55_RS26760;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612244.1;locus_tag=AL55_RS26760;product=ISNCY family transposase;pseudo=true;transl_table=11 NZ_KK316830.1 RefSeq gene 61727 63904 . + . ID=gene-AL55_RS24850;Name=AL55_RS24850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24850;old_locus_tag=AL55_03957 NZ_KK316830.1 Protein Homology CDS 61727 63904 . + 0 ID=cds-WP_016330440.1;Parent=gene-AL55_RS24850;Dbxref=GenBank:WP_016330440.1;Name=WP_016330440.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177968.1;locus_tag=AL55_RS24850;product=PE family protein;protein_id=WP_016330440.1;transl_table=11 NZ_KK316830.1 RefSeq gene 63975 64847 . - . ID=gene-AL55_RS24855;Name=htdY;gbkey=Gene;gene=htdY;gene_biotype=protein_coding;locus_tag=AL55_RS24855;old_locus_tag=AL55_03958 NZ_KK316830.1 Protein Homology CDS 63975 64847 . - 0 ID=cds-WP_003906098.1;Parent=gene-AL55_RS24855;Dbxref=GenBank:WP_003906098.1;Name=WP_003906098.1;gbkey=CDS;gene=htdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217906.1;locus_tag=AL55_RS24855;product=3-hydroxyacyl-thioester dehydratase HtdY;protein_id=WP_003906098.1;transl_table=11 NZ_KK316830.1 RefSeq gene 64921 65631 . + . ID=gene-AL55_RS24860;Name=lpqD;gbkey=Gene;gene=lpqD;gene_biotype=protein_coding;locus_tag=AL55_RS24860;old_locus_tag=AL55_03959 NZ_KK316830.1 Protein Homology CDS 64921 65631 . + 0 ID=cds-WP_003417932.1;Parent=gene-AL55_RS24860;Dbxref=GenBank:WP_003417932.1;Name=WP_003417932.1;Ontology_term=GO:0016791;gbkey=CDS;gene=lpqD;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217907.1;locus_tag=AL55_RS24860;product=histidine phosphatase family protein;protein_id=WP_003417932.1;transl_table=11 NZ_KK316830.1 RefSeq gene 65677 67629 . + . ID=gene-AL55_RS24865;Name=AL55_RS24865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24865;old_locus_tag=AL55_03960 NZ_KK316830.1 Protein Homology CDS 65677 67629 . + 0 ID=cds-WP_003417940.1;Parent=gene-AL55_RS24865;Dbxref=GenBank:WP_003417940.1;Name=WP_003417940.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217908.1;locus_tag=AL55_RS24865;product=SDR family oxidoreductase;protein_id=WP_003417940.1;transl_table=11 NZ_KK316830.1 RefSeq gene 67630 68493 . - . ID=gene-AL55_RS24870;Name=cmaA1;gbkey=Gene;gene=cmaA1;gene_biotype=protein_coding;locus_tag=AL55_RS24870;old_locus_tag=AL55_03961 NZ_KK316830.1 Protein Homology CDS 67630 68493 . - 0 ID=cds-WP_003900041.1;Parent=gene-AL55_RS24870;Dbxref=GenBank:WP_003900041.1;Name=WP_003900041.1;gbkey=CDS;gene=cmaA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217909.1;locus_tag=AL55_RS24870;product=cyclopropane mycolic acid synthase CmaA1;protein_id=WP_003900041.1;transl_table=11 NZ_KK316830.1 RefSeq gene 68517 69443 . + . ID=gene-AL55_RS24875;Name=iunH;gbkey=Gene;gene=iunH;gene_biotype=protein_coding;locus_tag=AL55_RS24875;old_locus_tag=AL55_03962 NZ_KK316830.1 Protein Homology CDS 68517 69443 . + 0 ID=cds-WP_003417946.1;Parent=gene-AL55_RS24875;Dbxref=GenBank:WP_003417946.1;Name=WP_003417946.1;gbkey=CDS;gene=iunH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217910.1;locus_tag=AL55_RS24875;product=nucleoside hydrolase IunH;protein_id=WP_003417946.1;transl_table=11 NZ_KK316830.1 RefSeq gene 69498 71081 . - . ID=gene-AL55_RS24880;Name=AL55_RS24880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24880;old_locus_tag=AL55_03963 NZ_KK316830.1 Protein Homology CDS 69498 71081 . - 0 ID=cds-WP_003900042.1;Parent=gene-AL55_RS24880;Dbxref=GenBank:WP_003900042.1;Name=WP_003900042.1;Ontology_term=GO:0006261,GO:0000287,GO:0003684,GO:0003887;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217911.1;locus_tag=AL55_RS24880;product=DNA polymerase Y family protein;protein_id=WP_003900042.1;transl_table=11 NZ_KK316830.1 RefSeq gene 71078 71692 . - . ID=gene-AL55_RS24885;Name=AL55_RS24885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24885;old_locus_tag=AL55_03964 NZ_KK316830.1 Protein Homology CDS 71078 71692 . - 0 ID=cds-WP_003900043.1;Parent=gene-AL55_RS24885;Dbxref=GenBank:WP_003900043.1;Name=WP_003900043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217912.2;locus_tag=AL55_RS24885;product=hypothetical protein;protein_id=WP_003900043.1;transl_table=11 NZ_KK316830.1 RefSeq gene 71691 72401 . + . ID=gene-AL55_RS24890;Name=AL55_RS24890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24890;old_locus_tag=AL55_03965 NZ_KK316830.1 Protein Homology CDS 71691 72401 . + 0 ID=cds-WP_016810333.1;Parent=gene-AL55_RS24890;Dbxref=GenBank:WP_016810333.1;Name=WP_016810333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487565.1;locus_tag=AL55_RS24890;product=hypothetical protein;protein_id=WP_016810333.1;transl_table=11 NZ_KK316830.1 RefSeq gene 72557 74134 . - . ID=gene-AL55_RS24895;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AL55_RS24895;old_locus_tag=AL55_03966 NZ_KK316830.1 Protein Homology CDS 72557 74134 . - 0 ID=cds-WP_003417952.1;Parent=gene-AL55_RS24895;Dbxref=GenBank:WP_003417952.1;Name=WP_003417952.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217913.1;locus_tag=AL55_RS24895;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_003417952.1;transl_table=11 NZ_KK316830.1 RefSeq gene 74146 75054 . - . ID=gene-AL55_RS24900;Name=hpnD;gbkey=Gene;gene=hpnD;gene_biotype=protein_coding;locus_tag=AL55_RS24900;old_locus_tag=AL55_03967 NZ_KK316830.1 Protein Homology CDS 74146 75054 . - 0 ID=cds-WP_003417954.1;Parent=gene-AL55_RS24900;Dbxref=GenBank:WP_003417954.1;Name=WP_003417954.1;Ontology_term=GO:0016117,GO:0046905;gbkey=CDS;gene=hpnD;go_function=15-cis-phytoene synthase activity|0046905||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217914.1;locus_tag=AL55_RS24900;product=presqualene diphosphate synthase HpnD;protein_id=WP_003417954.1;transl_table=11 NZ_KK316830.1 RefSeq gene 75083 76162 . - . ID=gene-AL55_RS24905;Name=idsA1;gbkey=Gene;gene=idsA1;gene_biotype=protein_coding;locus_tag=AL55_RS24905;old_locus_tag=AL55_03968 NZ_KK316830.1 Protein Homology CDS 75083 76162 . - 0 ID=cds-WP_003417957.1;Parent=gene-AL55_RS24905;Dbxref=GenBank:WP_003417957.1;Name=WP_003417957.1;gbkey=CDS;gene=idsA1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177970.1;locus_tag=AL55_RS24905;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_003417957.1;transl_table=11 NZ_KK316830.1 RefSeq gene 76311 77231 . + . ID=gene-AL55_RS24910;Name=AL55_RS24910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24910;old_locus_tag=AL55_03969 NZ_KK316830.1 Protein Homology CDS 76311 77231 . + 0 ID=cds-WP_003912218.1;Parent=gene-AL55_RS24910;Dbxref=GenBank:WP_003912218.1;Name=WP_003912218.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936179.1;locus_tag=AL55_RS24910;product=class I SAM-dependent methyltransferase;protein_id=WP_003912218.1;transl_table=11 NZ_KK316830.1 RefSeq gene 77295 78083 . + . ID=gene-AL55_RS24915;Name=AL55_RS24915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24915;old_locus_tag=AL55_03970 NZ_KK316830.1 Protein Homology CDS 77295 78083 . + 0 ID=cds-WP_003417961.1;Parent=gene-AL55_RS24915;Dbxref=GenBank:WP_003417961.1;Name=WP_003417961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217917.1;locus_tag=AL55_RS24915;product=beta-phosphoglucomutase family hydrolase;protein_id=WP_003417961.1;transl_table=11 NZ_KK316830.1 RefSeq gene 78098 80458 . + . ID=gene-AL55_RS24920;Name=AL55_RS24920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24920;old_locus_tag=AL55_03971 NZ_KK316830.1 Protein Homology CDS 78098 80458 . + 0 ID=cds-WP_003900047.1;Parent=gene-AL55_RS24920;Dbxref=GenBank:WP_003900047.1;Name=WP_003900047.1;Ontology_term=GO:0005975,GO:0016787,GO:0030246;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217918.1;locus_tag=AL55_RS24920;product=glycoside hydrolase family 65 protein;protein_id=WP_003900047.1;transl_table=11 NZ_KK316830.1 RefSeq gene 80736 80948 . - . ID=gene-AL55_RS26770;Name=AL55_RS26770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26770 NZ_KK316830.1 Protein Homology CDS 80736 80948 . - 0 ID=cds-WP_003915386.1;Parent=gene-AL55_RS26770;Dbxref=GenBank:WP_003915386.1;Name=WP_003915386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915386.1;locus_tag=AL55_RS26770;product=hypothetical protein;protein_id=WP_003915386.1;transl_table=11 NZ_KK316830.1 RefSeq gene 80941 82179 . - . ID=gene-AL55_RS24925;Name=AL55_RS24925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24925;old_locus_tag=AL55_03972 NZ_KK316830.1 Protein Homology CDS 80941 82179 . - 0 ID=cds-WP_003902474.1;Parent=gene-AL55_RS24925;Dbxref=GenBank:WP_003902474.1;Name=WP_003902474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217919.1;locus_tag=AL55_RS24925;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_003902474.1;transl_table=11 NZ_KK316830.1 RefSeq gene 82550 84151 . - . ID=gene-AL55_RS24930;Name=AL55_RS24930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24930;old_locus_tag=AL55_03973 NZ_KK316830.1 Protein Homology CDS 82550 84151 . - 0 ID=cds-WP_003417969.1;Parent=gene-AL55_RS24930;Dbxref=GenBank:WP_003417969.1;Name=WP_003417969.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217920.1;locus_tag=AL55_RS24930;product=FAD/NAD(P)-binding protein;protein_id=WP_003417969.1;transl_table=11 NZ_KK316830.1 RefSeq gene 84168 84872 . - . ID=gene-AL55_RS24935;Name=AL55_RS24935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24935;old_locus_tag=AL55_03974 NZ_KK316830.1 Protein Homology CDS 84168 84872 . - 0 ID=cds-WP_003417980.1;Parent=gene-AL55_RS24935;Dbxref=GenBank:WP_003417980.1;Name=WP_003417980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217921.1;locus_tag=AL55_RS24935;product=dTDP-4-amino-4%2C6-dideoxyglucose formyltransferase;protein_id=WP_003417980.1;transl_table=11 NZ_KK316830.1 RefSeq gene 84990 85556 . - . ID=gene-AL55_RS24940;Name=AL55_RS24940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24940;old_locus_tag=AL55_03975 NZ_KK316830.1 Protein Homology CDS 84990 85556 . - 0 ID=cds-WP_003417984.1;Parent=gene-AL55_RS24940;Dbxref=GenBank:WP_003417984.1;Name=WP_003417984.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217922.1;locus_tag=AL55_RS24940;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003417984.1;transl_table=11 NZ_KK316830.1 RefSeq gene 85618 86505 . + . ID=gene-AL55_RS24945;Name=AL55_RS24945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24945;old_locus_tag=AL55_03976 NZ_KK316830.1 Protein Homology CDS 85618 86505 . + 0 ID=cds-WP_003900050.1;Parent=gene-AL55_RS24945;Dbxref=GenBank:WP_003900050.1;Name=WP_003900050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217923.1;locus_tag=AL55_RS24945;product=alpha-ketoglutarate-dependent sulfate ester dioxygenase;protein_id=WP_003900050.1;transl_table=11 NZ_KK316830.1 RefSeq gene 86561 86839 . + . ID=gene-AL55_RS24950;Name=AL55_RS24950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24950;old_locus_tag=AL55_03977 NZ_KK316830.1 Protein Homology CDS 86561 86839 . + 0 ID=cds-WP_180895138.1;Parent=gene-AL55_RS24950;Dbxref=GenBank:WP_180895138.1;Name=WP_180895138.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912220.1;locus_tag=AL55_RS24950;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_180895138.1;transl_table=11 NZ_KK316830.1 RefSeq gene 86836 87246 . + . ID=gene-AL55_RS24955;Name=AL55_RS24955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24955;old_locus_tag=AL55_03978 NZ_KK316830.1 Protein Homology CDS 86836 87246 . + 0 ID=cds-WP_003417998.1;Parent=gene-AL55_RS24955;Dbxref=GenBank:WP_003417998.1;Name=WP_003417998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217925.1;locus_tag=AL55_RS24955;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003417998.1;transl_table=11 NZ_KK316830.1 RefSeq gene 87279 89015 . - . ID=gene-AL55_RS24960;Name=choD;gbkey=Gene;gene=choD;gene_biotype=protein_coding;locus_tag=AL55_RS24960;old_locus_tag=AL55_03979 NZ_KK316830.1 Protein Homology CDS 87279 89015 . - 0 ID=cds-WP_003418002.1;Parent=gene-AL55_RS24960;Dbxref=GenBank:WP_003418002.1;Name=WP_003418002.1;gbkey=CDS;gene=choD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217926.1;locus_tag=AL55_RS24960;product=cholesterol oxidase;protein_id=WP_003418002.1;transl_table=11 NZ_KK316830.1 RefSeq gene 89071 90198 . - . ID=gene-AL55_RS24965;Name=AL55_RS24965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24965;old_locus_tag=AL55_03980 NZ_KK316830.1 Protein Homology CDS 89071 90198 . - 0 ID=cds-WP_003418005.1;Parent=gene-AL55_RS24965;Dbxref=GenBank:WP_003418005.1;Name=WP_003418005.1;Ontology_term=GO:0003938;gbkey=CDS;go_function=IMP dehydrogenase activity|0003938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217927.1;locus_tag=AL55_RS24965;product=GuaB3 family IMP dehydrogenase-related protein;protein_id=WP_003418005.1;transl_table=11 NZ_KK316830.1 RefSeq gene 90218 91807 . - . ID=gene-AL55_RS24970;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AL55_RS24970;old_locus_tag=AL55_03981 NZ_KK316830.1 Protein Homology CDS 90218 91807 . - 0 ID=cds-WP_003901630.1;Parent=gene-AL55_RS24970;Dbxref=GenBank:WP_003901630.1;Name=WP_003901630.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217928.1;locus_tag=AL55_RS24970;product=IMP dehydrogenase;protein_id=WP_003901630.1;transl_table=11 NZ_KK316830.1 RefSeq gene 92014 92424 . + . ID=gene-AL55_RS24975;Name=AL55_RS24975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24975;old_locus_tag=AL55_03982 NZ_KK316830.1 Protein Homology CDS 92014 92424 . + 0 ID=cds-WP_003418008.1;Parent=gene-AL55_RS24975;Dbxref=GenBank:WP_003418008.1;Name=WP_003418008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217929.1;locus_tag=AL55_RS24975;product=DUF5319 domain-containing protein;protein_id=WP_003418008.1;transl_table=11 NZ_KK316830.1 RefSeq gene 92434 93333 . - . ID=gene-AL55_RS24980;Name=rsdA;gbkey=Gene;gene=rsdA;gene_biotype=protein_coding;locus_tag=AL55_RS24980;old_locus_tag=AL55_03983 NZ_KK316830.1 Protein Homology CDS 92434 93333 . - 0 ID=cds-WP_003418011.1;Parent=gene-AL55_RS24980;Dbxref=GenBank:WP_003418011.1;Name=WP_003418011.1;gbkey=CDS;gene=rsdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217930.1;locus_tag=AL55_RS24980;product=anti-sigma D factor RsdA;protein_id=WP_003418011.1;transl_table=11 NZ_KK316830.1 RefSeq gene 93326 93901 . - . ID=gene-AL55_RS24985;Name=sigD;gbkey=Gene;gene=sigD;gene_biotype=protein_coding;locus_tag=AL55_RS24985;old_locus_tag=AL55_03984 NZ_KK316830.1 Protein Homology CDS 93326 93901 . - 0 ID=cds-WP_003917787.1;Parent=gene-AL55_RS24985;Dbxref=GenBank:WP_003917787.1;Name=WP_003917787.1;gbkey=CDS;gene=sigD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917787.1;locus_tag=AL55_RS24985;product=ECF RNA polymerase sigma factor SigD;protein_id=WP_003917787.1;transl_table=11 NZ_KK316830.1 RefSeq gene 93982 94809 . - . ID=gene-AL55_RS24990;Name=AL55_RS24990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS24990;old_locus_tag=AL55_03985 NZ_KK316830.1 Protein Homology CDS 93982 94809 . - 0 ID=cds-WP_003900051.1;Parent=gene-AL55_RS24990;Dbxref=GenBank:WP_003900051.1;Name=WP_003900051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217932.1;locus_tag=AL55_RS24990;product=hypothetical protein;protein_id=WP_003900051.1;transl_table=11 NZ_KK316830.1 RefSeq gene 95180 95488 . + . ID=gene-AL55_RS24995;Name=whiB3;gbkey=Gene;gene=whiB3;gene_biotype=protein_coding;locus_tag=AL55_RS24995;old_locus_tag=AL55_03986 NZ_KK316830.1 Protein Homology CDS 95180 95488 . + 0 ID=cds-WP_003418017.1;Parent=gene-AL55_RS24995;Dbxref=GenBank:WP_003418017.1;Name=WP_003418017.1;gbkey=CDS;gene=whiB3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217933.1;locus_tag=AL55_RS24995;product=redox-responsive transcriptional regulator WhiB3;protein_id=WP_003418017.1;transl_table=11 NZ_KK316830.1 RefSeq gene 95560 97179 . - . ID=gene-AL55_RS25000;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AL55_RS25000;old_locus_tag=AL55_03987 NZ_KK316830.1 Protein Homology CDS 95560 97179 . - 0 ID=cds-WP_003418021.1;Parent=gene-AL55_RS25000;Dbxref=GenBank:WP_003418021.1;Name=WP_003418021.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217934.1;locus_tag=AL55_RS25000;product=chaperonin GroEL;protein_id=WP_003418021.1;transl_table=11 NZ_KK316830.1 RefSeq gene 97274 97576 . - . ID=gene-AL55_RS25005;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=AL55_RS25005;old_locus_tag=AL55_03988 NZ_KK316830.1 Protein Homology CDS 97274 97576 . - 0 ID=cds-WP_003418028.1;Parent=gene-AL55_RS25005;Dbxref=GenBank:WP_003418028.1;Name=WP_003418028.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003929249.1;locus_tag=AL55_RS25005;product=co-chaperone GroES;protein_id=WP_003418028.1;transl_table=11 NZ_KK316830.1 RefSeq gene 97843 98877 . - . ID=gene-AL55_RS25010;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=AL55_RS25010;old_locus_tag=AL55_03989 NZ_KK316830.1 Protein Homology CDS 97843 98877 . - 0 ID=cds-WP_003900052.1;Parent=gene-AL55_RS25010;Dbxref=GenBank:WP_003900052.1;Name=WP_003900052.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217936.1;locus_tag=AL55_RS25010;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_003900052.1;transl_table=11 NZ_KK316830.1 RefSeq gene 98874 99350 . - . ID=gene-AL55_RS25015;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=AL55_RS25015;old_locus_tag=AL55_03990 NZ_KK316830.1 Protein Homology CDS 98874 99350 . - 0 ID=cds-WP_003418034.1;Parent=gene-AL55_RS25015;Dbxref=GenBank:WP_003418034.1;Name=WP_003418034.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217937.1;locus_tag=AL55_RS25015;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_003418034.1;transl_table=11 NZ_KK316830.1 RefSeq gene 99347 99982 . - . ID=gene-AL55_RS25020;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=AL55_RS25020;old_locus_tag=AL55_03991 NZ_KK316830.1 Protein Homology CDS 99347 99982 . - 0 ID=cds-WP_003418038.1;Parent=gene-AL55_RS25020;Dbxref=GenBank:WP_003418038.1;Name=WP_003418038.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217938.1;locus_tag=AL55_RS25020;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_003418038.1;transl_table=11 NZ_KK316830.1 RefSeq gene 99979 100485 . - . ID=gene-AL55_RS25025;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=AL55_RS25025;old_locus_tag=AL55_03992 NZ_KK316830.1 Protein Homology CDS 99979 100485 . - 0 ID=cds-WP_003418042.1;Parent=gene-AL55_RS25025;Dbxref=GenBank:WP_003418042.1;Name=WP_003418042.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217939.1;locus_tag=AL55_RS25025;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_003418042.1;transl_table=11 NZ_KK316830.1 RefSeq gene 100482 101642 . - . ID=gene-AL55_RS25030;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AL55_RS25030;old_locus_tag=AL55_03993 NZ_KK316830.1 Protein Homology CDS 100482 101642 . - 0 ID=cds-WP_023637501.1;Parent=gene-AL55_RS25030;Dbxref=GenBank:WP_023637501.1;Name=WP_023637501.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303874.1;locus_tag=AL55_RS25030;product=alanine racemase;protein_id=WP_023637501.1;transl_table=11 NZ_KK316830.1 RefSeq gene 101668 101898 . + . ID=gene-AL55_RS26775;Name=AL55_RS26775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26775 NZ_KK316830.1 Protein Homology CDS 101668 101898 . + 0 ID=cds-WP_003900685.1;Parent=gene-AL55_RS26775;Dbxref=GenBank:WP_003900685.1;Name=WP_003900685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900685.1;locus_tag=AL55_RS26775;product=histone acetyltransferase;protein_id=WP_003900685.1;transl_table=11 NZ_KK316830.1 RefSeq gene 102002 102364 . - . ID=gene-AL55_RS25035;Name=AL55_RS25035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25035;old_locus_tag=AL55_03994 NZ_KK316830.1 Protein Homology CDS 102002 102364 . - 0 ID=cds-WP_003902478.1;Parent=gene-AL55_RS25035;Dbxref=GenBank:WP_003902478.1;Name=WP_003902478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217941.1;locus_tag=AL55_RS25035;product=hypothetical protein;protein_id=WP_003902478.1;transl_table=11 NZ_KK316830.1 RefSeq pseudogene 102527 103056 . + . ID=gene-AL55_RS27165;Name=AL55_RS27165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS27165;pseudo=true NZ_KK316830.1 Protein Homology CDS 102527 103056 . + 0 ID=cds-AL55_RS27165;Parent=gene-AL55_RS27165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177971.1;locus_tag=AL55_RS27165;product=PPE family protein;pseudo=true;transl_table=11 NZ_KK316830.1 RefSeq gene 103323 103853 . + . ID=gene-AL55_RS25040;Name=AL55_RS25040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25040;old_locus_tag=AL55_03996 NZ_KK316830.1 Protein Homology CDS 103323 103853 . + 0 ID=cds-WP_003418122.1;Parent=gene-AL55_RS25040;Dbxref=GenBank:WP_003418122.1;Name=WP_003418122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012054359.1;locus_tag=AL55_RS25040;product=PPE family protein;protein_id=WP_003418122.1;transl_table=11 NZ_KK316830.1 RefSeq gene 104171 104926 . - . ID=gene-AL55_RS25045;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AL55_RS25045;old_locus_tag=AL55_03997 NZ_KK316830.1 Protein Homology CDS 104171 104926 . - 0 ID=cds-WP_003418125.1;Parent=gene-AL55_RS25045;Dbxref=GenBank:WP_003418125.1;Name=WP_003418125.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217944.1;locus_tag=AL55_RS25045;product=IS21-like element ISMt2 family helper ATPase IstB;protein_id=WP_003418125.1;transl_table=11 NZ_KK316830.1 RefSeq gene 105010 106271 . - . ID=gene-AL55_RS25050;Name=AL55_RS25050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25050;old_locus_tag=AL55_03998 NZ_KK316830.1 Protein Homology CDS 105983 106271 . - 0 ID=cds-WP_087902221.1-18;Parent=gene-AL55_RS25050;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS25050;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316830.1 Protein Homology CDS 105010 105983 . - 2 ID=cds-WP_087902221.1-18;Parent=gene-AL55_RS25050;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL55_RS25050;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316830.1 RefSeq pseudogene 106355 107894 . - . ID=gene-AL55_RS0105770;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=AL55_RS0105770;old_locus_tag=AL55_04000;partial=true;pseudo=true;start_range=.,106355 NZ_KK316830.1 Protein Homology CDS 106355 107894 . - 0 ID=cds-AL55_RS0105770;Parent=gene-AL55_RS0105770;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_176223647.1;locus_tag=AL55_RS0105770;partial=true;product=IS21-like element ISMt2 family transposase;pseudo=true;start_range=.,106355;transl_table=11 NZ_KK316830.1 RefSeq gene 108410 108709 . + . ID=gene-AL55_RS0105780;Name=AL55_RS0105780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105780 NZ_KK316830.1 Protein Homology CDS 108410 108709 . + 0 ID=cds-WP_003902483.1;Parent=gene-AL55_RS0105780;Dbxref=GenBank:WP_003902483.1;Name=WP_003902483.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901635.1;locus_tag=AL55_RS0105780;product=PE family protein;protein_id=WP_003902483.1;transl_table=11 NZ_KK316830.1 RefSeq gene 108795 109337 . + . ID=gene-AL55_RS25055;Name=AL55_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25055;old_locus_tag=AL55_04001 NZ_KK316830.1 Protein Homology CDS 108795 109337 . + 0 ID=cds-WP_003418141.1;Parent=gene-AL55_RS25055;Dbxref=GenBank:WP_003418141.1;Name=WP_003418141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294407.1;locus_tag=AL55_RS25055;product=PPE family protein;protein_id=WP_003418141.1;transl_table=11 NZ_KK316830.1 RefSeq gene 109428 109823 . + . ID=gene-AL55_RS25060;Name=AL55_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25060;old_locus_tag=AL55_04002 NZ_KK316830.1 Protein Homology CDS 109428 109823 . + 0 ID=cds-WP_003418146.1;Parent=gene-AL55_RS25060;Dbxref=GenBank:WP_003418146.1;Name=WP_003418146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001737.1;locus_tag=AL55_RS25060;product=PE/PPE C-terminal domain-containing protein;protein_id=WP_003418146.1;transl_table=11 NZ_KK316830.1 RefSeq gene 109850 109975 . - . ID=gene-AL55_RS28310;Name=AL55_RS28310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS28310 NZ_KK316830.1 Protein Homology CDS 109850 109975 . - 0 ID=cds-WP_009940399.1;Parent=gene-AL55_RS28310;Dbxref=GenBank:WP_009940399.1;Name=WP_009940399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940399.1;locus_tag=AL55_RS28310;product=hypothetical protein;protein_id=WP_009940399.1;transl_table=11 NZ_KK316830.1 RefSeq gene 110706 111068 . - . ID=gene-AL55_RS26805;Name=AL55_RS26805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS26805 NZ_KK316830.1 Protein Homology CDS 110706 111068 . - 0 ID=cds-WP_003902478.1-2;Parent=gene-AL55_RS26805;Dbxref=GenBank:WP_003902478.1;Name=WP_003902478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217941.1;locus_tag=AL55_RS26805;product=hypothetical protein;protein_id=WP_003902478.1;transl_table=11 NZ_KK316830.1 RefSeq gene 111231 111767 . + . ID=gene-AL55_RS25065;Name=AL55_RS25065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25065;old_locus_tag=AL55_04003 NZ_KK316830.1 Protein Homology CDS 111231 111767 . + 0 ID=cds-WP_003902485.1;Parent=gene-AL55_RS25065;Dbxref=GenBank:WP_003902485.1;Name=WP_003902485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177973.1;locus_tag=AL55_RS25065;product=PPE family protein;protein_id=WP_003902485.1;transl_table=11 NZ_KK316830.1 RefSeq pseudogene 111824 112871 . - . ID=gene-AL55_RS25070;Name=AL55_RS25070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25070;old_locus_tag=AL55_04004;pseudo=true NZ_KK316830.1 Protein Homology CDS 111824 112871 . - 0 ID=cds-AL55_RS25070;Parent=gene-AL55_RS25070;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558364.1;locus_tag=AL55_RS25070;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_KK316830.1 RefSeq gene 112910 113065 . - . ID=gene-AL55_RS27170;Name=AL55_RS27170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27170 NZ_KK316830.1 Protein Homology CDS 112910 113065 . - 0 ID=cds-WP_003418266.1;Parent=gene-AL55_RS27170;Dbxref=GenBank:WP_003418266.1;Name=WP_003418266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030046.1;locus_tag=AL55_RS27170;product=hypothetical protein;protein_id=WP_003418266.1;transl_table=11 NZ_KK316830.1 RefSeq gene 113090 113245 . - . ID=gene-AL55_RS27445;Name=AL55_RS27445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS27445 NZ_KK316830.1 GeneMarkS-2+ CDS 113090 113245 . - 0 ID=cds-WP_003917789.1;Parent=gene-AL55_RS27445;Dbxref=GenBank:WP_003917789.1;Name=WP_003917789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL55_RS27445;product=hypothetical protein;protein_id=WP_003917789.1;transl_table=11 NZ_KK316830.1 RefSeq pseudogene 113372 114220 . - . ID=gene-AL55_RS25075;Name=AL55_RS25075;end_range=114220,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25075;old_locus_tag=AL55_04005;partial=true;pseudo=true;start_range=.,113372 NZ_KK316830.1 Protein Homology CDS 113372 114220 . - 0 ID=cds-AL55_RS25075;Parent=gene-AL55_RS25075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=114220,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032488867.1;locus_tag=AL55_RS25075;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,113372;transl_table=11 NZ_KK316830.1 RefSeq gene 114438 115820 . - . ID=gene-AL55_RS25080;Name=gadB;gbkey=Gene;gene=gadB;gene_biotype=protein_coding;locus_tag=AL55_RS25080;old_locus_tag=AL55_04006 NZ_KK316830.1 Protein Homology CDS 114438 115820 . - 0 ID=cds-WP_003418277.1;Parent=gene-AL55_RS25080;Dbxref=GenBank:WP_003418277.1;Name=WP_003418277.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;gene=gadB;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217949.1;locus_tag=AL55_RS25080;product=glutamate decarboxylase;protein_id=WP_003418277.1;transl_table=11 NZ_KK316830.1 RefSeq gene 115858 117279 . - . ID=gene-AL55_RS25085;Name=AL55_RS25085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25085;old_locus_tag=AL55_04007 NZ_KK316830.1 Protein Homology CDS 115858 117279 . - 0 ID=cds-WP_003418280.1;Parent=gene-AL55_RS25085;Dbxref=GenBank:WP_003418280.1;Name=WP_003418280.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217950.1;locus_tag=AL55_RS25085;product=NAD(P)H-hydrate dehydratase;protein_id=WP_003418280.1;transl_table=11 NZ_KK316830.1 RefSeq gene 117281 117994 . - . ID=gene-AL55_RS25090;Name=AL55_RS25090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25090;old_locus_tag=AL55_04008 NZ_KK316830.1 Protein Homology CDS 117281 117994 . - 0 ID=cds-WP_003418284.1;Parent=gene-AL55_RS25090;Dbxref=GenBank:WP_003418284.1;Name=WP_003418284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217951.1;locus_tag=AL55_RS25090;product=rhomboid-like protein;protein_id=WP_003418284.1;transl_table=11 NZ_KK316830.1 RefSeq gene 118005 118859 . - . ID=gene-AL55_RS25095;Name=AL55_RS25095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25095;old_locus_tag=AL55_04009 NZ_KK316830.1 Protein Homology CDS 118005 118859 . - 0 ID=cds-WP_003901640.1;Parent=gene-AL55_RS25095;Dbxref=GenBank:WP_003901640.1;Name=WP_003901640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217952.1;locus_tag=AL55_RS25095;product=DUF4436 domain-containing protein;protein_id=WP_003901640.1;transl_table=11 NZ_KK316830.1 RefSeq gene 119081 120955 . - . ID=gene-AL55_RS25100;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AL55_RS25100;old_locus_tag=AL55_04010 NZ_KK316830.1 Protein Homology CDS 119081 120955 . - 0 ID=cds-WP_003418289.1;Parent=gene-AL55_RS25100;Dbxref=GenBank:WP_003418289.1;Name=WP_003418289.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217953.1;locus_tag=AL55_RS25100;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_003418289.1;transl_table=11 NZ_KK316830.1 RefSeq gene 120977 121453 . + . ID=gene-AL55_RS25105;Name=AL55_RS25105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25105;old_locus_tag=AL55_04011 NZ_KK316830.1 Protein Homology CDS 120977 121453 . + 0 ID=cds-WP_003900057.1;Parent=gene-AL55_RS25105;Dbxref=GenBank:WP_003900057.1;Name=WP_003900057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217954.1;locus_tag=AL55_RS25105;product=DUF2510 domain-containing protein;protein_id=WP_003900057.1;transl_table=11 NZ_KK316830.1 RefSeq gene 121463 122305 . + . ID=gene-AL55_RS25110;Name=AL55_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25110;old_locus_tag=AL55_04012 NZ_KK316830.1 Protein Homology CDS 121463 122305 . + 0 ID=cds-WP_003418298.1;Parent=gene-AL55_RS25110;Dbxref=GenBank:WP_003418298.1;Name=WP_003418298.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217955.1;locus_tag=AL55_RS25110;product=dienelactone hydrolase family protein;protein_id=WP_003418298.1;transl_table=11 NZ_KK316830.1 RefSeq gene 122325 123728 . - . ID=gene-AL55_RS25115;Name=AL55_RS25115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25115;old_locus_tag=AL55_04013 NZ_KK316830.1 Protein Homology CDS 122325 123728 . - 0 ID=cds-WP_003418300.1;Parent=gene-AL55_RS25115;Dbxref=GenBank:WP_003418300.1;Name=WP_003418300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217956.1;locus_tag=AL55_RS25115;product=hypothetical protein;protein_id=WP_003418300.1;transl_table=11 NZ_KK316830.1 RefSeq gene 123731 124042 . - . ID=gene-AL55_RS25120;Name=AL55_RS25120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25120;old_locus_tag=AL55_04014 NZ_KK316830.1 Protein Homology CDS 123731 124042 . - 0 ID=cds-WP_003418301.1;Parent=gene-AL55_RS25120;Dbxref=GenBank:WP_003418301.1;Name=WP_003418301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217957.1;locus_tag=AL55_RS25120;product=hypothetical protein;protein_id=WP_003418301.1;transl_table=11 NZ_KK316830.1 RefSeq gene 124090 125436 . - . ID=gene-AL55_RS25125;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AL55_RS25125;old_locus_tag=AL55_04015 NZ_KK316830.1 Protein Homology CDS 124090 125436 . - 0 ID=cds-WP_003418304.1;Parent=gene-AL55_RS25125;Dbxref=GenBank:WP_003418304.1;Name=WP_003418304.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217958.1;locus_tag=AL55_RS25125;product=phosphoglucosamine mutase;protein_id=WP_003418304.1;transl_table=11 NZ_KK316830.1 RefSeq gene 125561 126016 . - . ID=gene-AL55_RS25130;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AL55_RS25130;old_locus_tag=AL55_04016 NZ_KK316830.1 Protein Homology CDS 125561 126016 . - 0 ID=cds-WP_003418308.1;Parent=gene-AL55_RS25130;Dbxref=GenBank:WP_003418308.1;Name=WP_003418308.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217959.1;locus_tag=AL55_RS25130;product=30S ribosomal protein S9;protein_id=WP_003418308.1;transl_table=11 NZ_KK316830.1 RefSeq gene 126013 126456 . - . ID=gene-AL55_RS25135;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AL55_RS25135;old_locus_tag=AL55_04017 NZ_KK316830.1 Protein Homology CDS 126013 126456 . - 0 ID=cds-WP_003418312.1;Parent=gene-AL55_RS25135;Dbxref=GenBank:WP_003418312.1;Name=WP_003418312.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217960.1;locus_tag=AL55_RS25135;product=50S ribosomal protein L13;protein_id=WP_003418312.1;transl_table=11 NZ_KK316830.1 RefSeq gene 126689 126991 . - . ID=gene-AL55_RS25140;Name=esxT;gbkey=Gene;gene=esxT;gene_biotype=protein_coding;locus_tag=AL55_RS25140;old_locus_tag=AL55_04018 NZ_KK316830.1 Protein Homology CDS 126689 126991 . - 0 ID=cds-WP_003900059.1;Parent=gene-AL55_RS25140;Dbxref=GenBank:WP_003900059.1;Name=WP_003900059.1;Ontology_term=GO:0005576;gbkey=CDS;gene=esxT;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217961.1;locus_tag=AL55_RS25140;product=WXG100 family type VII secretion target;protein_id=WP_003900059.1;transl_table=11 NZ_KK316830.1 RefSeq gene 127012 127329 . - . ID=gene-AL55_RS25145;Name=esxU;gbkey=Gene;gene=esxU;gene_biotype=protein_coding;locus_tag=AL55_RS25145;old_locus_tag=AL55_04019 NZ_KK316830.1 Protein Homology CDS 127012 127329 . - 0 ID=cds-WP_014584922.1;Parent=gene-AL55_RS25145;Dbxref=GenBank:WP_014584922.1;Name=WP_014584922.1;gbkey=CDS;gene=esxU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217962.2;locus_tag=AL55_RS25145;product=type VII secretion system ESX-4 protein EsxU;protein_id=WP_014584922.1;transl_table=11 NZ_KK316830.1 RefSeq gene 127382 128596 . - . ID=gene-AL55_RS25150;Name=AL55_RS25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25150;old_locus_tag=AL55_04020 NZ_KK316830.1 Protein Homology CDS 127382 128596 . - 0 ID=cds-WP_003906107.1;Parent=gene-AL55_RS25150;Dbxref=GenBank:WP_003906107.1;Name=WP_003906107.1;Ontology_term=GO:0009306;gbkey=CDS;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217963.1;locus_tag=AL55_RS25150;product=type VII secretion-associated protein;protein_id=WP_003906107.1;transl_table=11 NZ_KK316830.1 RefSeq gene 128593 132303 . - . ID=gene-AL55_RS25155;Name=eccC4;gbkey=Gene;gene=eccC4;gene_biotype=protein_coding;locus_tag=AL55_RS25155;old_locus_tag=AL55_04021 NZ_KK316830.1 Protein Homology CDS 128593 132303 . - 0 ID=cds-WP_003418326.1;Parent=gene-AL55_RS25155;Dbxref=GenBank:WP_003418326.1;Name=WP_003418326.1;gbkey=CDS;gene=eccC4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217964.1;locus_tag=AL55_RS25155;product=type VII secretion system ESX-4 FtsK/SpoIIIE family ATPase EccC4;protein_id=WP_003418326.1;transl_table=11 NZ_KK316830.1 RefSeq gene 132417 133820 . + . ID=gene-AL55_RS25160;Name=eccD4;gbkey=Gene;gene=eccD4;gene_biotype=protein_coding;locus_tag=AL55_RS25160;old_locus_tag=AL55_04022 NZ_KK316830.1 Protein Homology CDS 132417 133820 . + 0 ID=cds-WP_003900062.1;Parent=gene-AL55_RS25160;Dbxref=GenBank:WP_003900062.1;Name=WP_003900062.1;gbkey=CDS;gene=eccD4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217965.1;locus_tag=AL55_RS25160;product=type VII secretion system ESX-4 subunit EccD4;protein_id=WP_003900062.1;transl_table=11 NZ_KK316830.1 RefSeq gene 133817 135184 . + . ID=gene-AL55_RS25165;Name=mycP4;gbkey=Gene;gene=mycP4;gene_biotype=protein_coding;locus_tag=AL55_RS25165;old_locus_tag=AL55_04023 NZ_KK316830.1 Protein Homology CDS 133817 135184 . + 0 ID=cds-WP_003901645.1;Parent=gene-AL55_RS25165;Dbxref=GenBank:WP_003901645.1;Name=WP_003901645.1;gbkey=CDS;gene=mycP4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217966.1;locus_tag=AL55_RS25165;product=type VII secretion system ESX-4 serine protease mycosin MycP4;protein_id=WP_003901645.1;transl_table=11 NZ_KK316830.1 RefSeq gene 135149 136561 . - . ID=gene-AL55_RS25170;Name=eccB4;gbkey=Gene;gene=eccB4;gene_biotype=protein_coding;locus_tag=AL55_RS25170;old_locus_tag=AL55_04024 NZ_KK316830.1 Protein Homology CDS 135149 136561 . - 0 ID=cds-WP_003418333.1;Parent=gene-AL55_RS25170;Dbxref=GenBank:WP_003418333.1;Name=WP_003418333.1;gbkey=CDS;gene=eccB4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217967.1;locus_tag=AL55_RS25170;product=type VII secretion system ESX-4 subunit EccB4;protein_id=WP_003418333.1;transl_table=11 NZ_KK316830.1 RefSeq gene 136682 137470 . + . ID=gene-AL55_RS25175;Name=AL55_RS25175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25175;old_locus_tag=AL55_04025 NZ_KK316830.1 Protein Homology CDS 136682 137470 . + 0 ID=cds-WP_003418336.1;Parent=gene-AL55_RS25175;Dbxref=GenBank:WP_003418336.1;Name=WP_003418336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217968.2;locus_tag=AL55_RS25175;product=cutinase family protein;protein_id=WP_003418336.1;transl_table=11 NZ_KK316830.1 RefSeq gene 137517 138197 . + . ID=gene-AL55_RS25180;Name=cut4;gbkey=Gene;gene=cut4;gene_biotype=protein_coding;locus_tag=AL55_RS25180;old_locus_tag=AL55_04026 NZ_KK316830.1 Protein Homology CDS 137517 138197 . + 0 ID=cds-WP_003418339.1;Parent=gene-AL55_RS25180;Dbxref=GenBank:WP_003418339.1;Name=WP_003418339.1;gbkey=CDS;gene=cut4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217969.1;locus_tag=AL55_RS25180;product=cutinase Cut4;protein_id=WP_003418339.1;transl_table=11 NZ_KK316830.1 RefSeq gene 138469 140154 . + . ID=gene-AL55_RS0105800;Name=AL55_RS0105800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105800;old_locus_tag=AL55_04028 NZ_KK316830.1 Protein Homology CDS 138469 140154 . + 0 ID=cds-WP_003418342.1;Parent=gene-AL55_RS0105800;Dbxref=GenBank:WP_003418342.1;Name=WP_003418342.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719627.1;locus_tag=AL55_RS0105800;product=purine-cytosine permease family protein;protein_id=WP_003418342.1;transl_table=11 NZ_KK316830.1 RefSeq gene 140116 141009 . - . ID=gene-AL55_RS25185;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AL55_RS25185;old_locus_tag=AL55_04029 NZ_KK316830.1 Protein Homology CDS 140116 141009 . - 0 ID=cds-WP_003418344.1;Parent=gene-AL55_RS25185;Dbxref=GenBank:WP_003418344.1;Name=WP_003418344.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003418344.1;locus_tag=AL55_RS25185;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_003418344.1;transl_table=11 NZ_KK316830.1 RefSeq gene 140954 141496 . - . ID=gene-AL55_RS25190;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AL55_RS25190;old_locus_tag=AL55_04030 NZ_KK316830.1 Protein Homology CDS 140954 141496 . - 0 ID=cds-WP_003418346.1;Parent=gene-AL55_RS25190;Dbxref=GenBank:WP_003418346.1;Name=WP_003418346.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217973.1;locus_tag=AL55_RS25190;product=50S ribosomal protein L17;protein_id=WP_003418346.1;transl_table=11 NZ_KK316830.1 RefSeq gene 141528 142571 . - . ID=gene-AL55_RS25195;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=AL55_RS25195;old_locus_tag=AL55_04031 NZ_KK316830.1 Protein Homology CDS 141528 142571 . - 0 ID=cds-WP_003418351.1;Parent=gene-AL55_RS25195;Dbxref=GenBank:WP_003418351.1;Name=WP_003418351.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217974.1;locus_tag=AL55_RS25195;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_003418351.1;transl_table=11 NZ_KK316830.1 RefSeq gene 142723 143328 . - . ID=gene-AL55_RS25200;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AL55_RS25200;old_locus_tag=AL55_04032 NZ_KK316830.1 Protein Homology CDS 142723 143328 . - 0 ID=cds-WP_003418354.1;Parent=gene-AL55_RS25200;Dbxref=GenBank:WP_003418354.1;Name=WP_003418354.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217975.1;locus_tag=AL55_RS25200;product=30S ribosomal protein S4;protein_id=WP_003418354.1;transl_table=11 NZ_KK316830.1 RefSeq gene 143337 143756 . - . ID=gene-AL55_RS25205;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AL55_RS25205;old_locus_tag=AL55_04033 NZ_KK316830.1 Protein Homology CDS 143337 143756 . - 0 ID=cds-WP_003900064.1;Parent=gene-AL55_RS25205;Dbxref=GenBank:WP_003900064.1;Name=WP_003900064.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217976.1;locus_tag=AL55_RS25205;product=30S ribosomal protein S11;protein_id=WP_003900064.1;transl_table=11 NZ_KK316830.1 RefSeq gene 143760 144134 . - . ID=gene-AL55_RS25210;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AL55_RS25210;old_locus_tag=AL55_04034 NZ_KK316830.1 Protein Homology CDS 143760 144134 . - 0 ID=cds-WP_003418360.1;Parent=gene-AL55_RS25210;Dbxref=GenBank:WP_003418360.1;Name=WP_003418360.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217977.1;locus_tag=AL55_RS25210;product=30S ribosomal protein S13;protein_id=WP_003418360.1;transl_table=11 NZ_KK316830.1 RefSeq gene 144407 144520 . - . ID=gene-AL55_RS25215;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AL55_RS25215;old_locus_tag=AL55_04035 NZ_KK316830.1 Protein Homology CDS 144407 144520 . - 0 ID=cds-WP_003418367.1;Parent=gene-AL55_RS25215;Dbxref=GenBank:WP_003418367.1;Name=WP_003418367.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217978.1;locus_tag=AL55_RS25215;product=50S ribosomal protein L36;protein_id=WP_003418367.1;transl_table=11 NZ_KK316830.1 RefSeq gene 144553 144774 . - . ID=gene-AL55_RS25220;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AL55_RS25220;old_locus_tag=AL55_04036 NZ_KK316830.1 Protein Homology CDS 144553 144774 . - 0 ID=cds-WP_003418601.1;Parent=gene-AL55_RS25220;Dbxref=GenBank:WP_003418601.1;Name=WP_003418601.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012039277.1;locus_tag=AL55_RS25220;product=translation initiation factor IF-1;protein_id=WP_003418601.1;transl_table=11 NZ_KK316830.1 RefSeq gene 145028 145885 . + . ID=gene-AL55_RS25225;Name=AL55_RS25225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25225;old_locus_tag=AL55_04037 NZ_KK316830.1 Protein Homology CDS 145028 145885 . + 0 ID=cds-WP_003418604.1;Parent=gene-AL55_RS25225;Dbxref=GenBank:WP_003418604.1;Name=WP_003418604.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217980.1;locus_tag=AL55_RS25225;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003418604.1;transl_table=11 NZ_KK316830.1 RefSeq gene 145958 146953 . + . ID=gene-AL55_RS25230;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=AL55_RS25230;old_locus_tag=AL55_04038 NZ_KK316830.1 Protein Homology CDS 145958 146953 . + 0 ID=cds-WP_003418607.1;Parent=gene-AL55_RS25230;Dbxref=GenBank:WP_003418607.1;Name=WP_003418607.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217981.1;locus_tag=AL55_RS25230;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_003418607.1;transl_table=11 NZ_KK316830.1 RefSeq gene 146955 147563 . + . ID=gene-AL55_RS25235;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=AL55_RS25235;old_locus_tag=AL55_04039 NZ_KK316830.1 Protein Homology CDS 146955 147563 . + 0 ID=cds-WP_003906113.1;Parent=gene-AL55_RS25235;Dbxref=GenBank:WP_003906113.1;Name=WP_003906113.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217982.1;locus_tag=AL55_RS25235;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_003906113.1;transl_table=11 NZ_KK316830.1 RefSeq pseudogene 147646 149038 . + . ID=gene-AL55_RS25240;Name=AL55_RS25240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25240;old_locus_tag=AL55_04041;pseudo=true NZ_KK316830.1 Protein Homology CDS 147646 149038 . + 0 ID=cds-AL55_RS25240;Parent=gene-AL55_RS25240;Note=frameshifted;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001758.1;locus_tag=AL55_RS25240;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_KK316830.1 RefSeq gene 149096 150169 . - . ID=gene-AL55_RS25245;Name=AL55_RS25245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25245;old_locus_tag=AL55_04042 NZ_KK316830.1 Protein Homology CDS 149096 150169 . - 0 ID=cds-WP_003913065.1;Parent=gene-AL55_RS25245;Dbxref=GenBank:WP_003913065.1;Name=WP_003913065.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914158.1;locus_tag=AL55_RS25245;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003913065.1;transl_table=11 NZ_KK316830.1 RefSeq gene 150194 151204 . - . ID=gene-AL55_RS25250;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=AL55_RS25250;old_locus_tag=AL55_04043 NZ_KK316830.1 Protein Homology CDS 150194 151204 . - 0 ID=cds-WP_003900067.1;Parent=gene-AL55_RS25250;Dbxref=GenBank:WP_003900067.1;Name=WP_003900067.1;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217986.1;locus_tag=AL55_RS25250;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_003900067.1;transl_table=11 NZ_KK316830.1 RefSeq gene 151265 152923 . - . ID=gene-AL55_RS25255;Name=AL55_RS25255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25255;old_locus_tag=AL55_04044 NZ_KK316830.1 Protein Homology CDS 151265 152923 . - 0 ID=cds-WP_003900704.1;Parent=gene-AL55_RS25255;Dbxref=GenBank:WP_003900704.1;Name=WP_003900704.1;Ontology_term=GO:0009097,GO:0009099,GO:0000287,GO:0030976,GO:0050660,GO:0005948;gbkey=CDS;go_component=acetolactate synthase complex|0005948||IEA;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,L-valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217987.1;locus_tag=AL55_RS25255;product=thiamine pyrophosphate-binding protein;protein_id=WP_003900704.1;transl_table=11 NZ_KK316830.1 RefSeq gene 152929 153318 . - . ID=gene-AL55_RS25260;Name=AL55_RS25260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25260;old_locus_tag=AL55_04045 NZ_KK316830.1 Protein Homology CDS 152929 153318 . - 0 ID=cds-WP_003900069.1;Parent=gene-AL55_RS25260;Dbxref=GenBank:WP_003900069.1;Name=WP_003900069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900069.1;locus_tag=AL55_RS25260;product=cupin domain-containing protein;protein_id=WP_003900069.1;transl_table=11 NZ_KK316830.1 RefSeq gene 153483 153989 . + . ID=gene-AL55_RS25265;Name=AL55_RS25265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25265;old_locus_tag=AL55_04046 NZ_KK316830.1 Protein Homology CDS 153483 153989 . + 0 ID=cds-WP_003418774.1;Parent=gene-AL55_RS25265;Dbxref=GenBank:WP_003418774.1;Name=WP_003418774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217989.1;locus_tag=AL55_RS25265;product=nuclear transport factor 2 family protein;protein_id=WP_003418774.1;transl_table=11 NZ_KK316830.1 RefSeq gene 154069 154971 . - . ID=gene-AL55_RS25270;Name=AL55_RS25270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25270;old_locus_tag=AL55_04047 NZ_KK316830.1 Protein Homology CDS 154069 154971 . - 0 ID=cds-WP_003913481.1;Parent=gene-AL55_RS25270;Dbxref=GenBank:WP_003913481.1;Name=WP_003913481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913481.1;locus_tag=AL55_RS25270;product=alpha/beta fold hydrolase;protein_id=WP_003913481.1;transl_table=11 NZ_KK316830.1 RefSeq gene 155134 156483 . - . ID=gene-AL55_RS25275;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AL55_RS25275;old_locus_tag=AL55_04048 NZ_KK316830.1 Protein Homology CDS 155134 156483 . - 0 ID=cds-WP_003901651.1;Parent=gene-AL55_RS25275;Dbxref=GenBank:WP_003901651.1;Name=WP_003901651.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=kgtP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901651.1;locus_tag=AL55_RS25275;product=MFS transporter;protein_id=WP_003901651.1;transl_table=11 NZ_KK316830.1 RefSeq gene 156856 157152 . + . ID=gene-AL55_RS25280;Name=AL55_RS25280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25280;old_locus_tag=AL55_04049 NZ_KK316830.1 Protein Homology CDS 156856 157152 . + 0 ID=cds-WP_003418781.1;Parent=gene-AL55_RS25280;Dbxref=GenBank:WP_003418781.1;Name=WP_003418781.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177975.1;locus_tag=AL55_RS25280;product=PE family protein;protein_id=WP_003418781.1;transl_table=11 NZ_KK316830.1 RefSeq gene 157189 158370 . + . ID=gene-AL55_RS25285;Name=AL55_RS25285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25285;old_locus_tag=AL55_04050 NZ_KK316830.1 Protein Homology CDS 157189 158370 . + 0 ID=cds-WP_003902494.1;Parent=gene-AL55_RS25285;Dbxref=GenBank:WP_003902494.1;Name=WP_003902494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177976.1;locus_tag=AL55_RS25285;product=PPE family protein PPE60;protein_id=WP_003902494.1;transl_table=11 NZ_KK316830.1 RefSeq gene 158400 161648 . + . ID=gene-AL55_RS25290;Name=AL55_RS25290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25290;old_locus_tag=AL55_04051 NZ_KK316830.1 Protein Homology CDS 158400 161648 . + 0 ID=cds-WP_095209671.1;Parent=gene-AL55_RS25290;Dbxref=GenBank:WP_095209671.1;Name=WP_095209671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915396.1;locus_tag=AL55_RS25290;product=patatin-like protein;protein_id=WP_095209671.1;transl_table=11 NZ_KK316830.1 RefSeq gene 161672 163165 . - . ID=gene-AL55_RS25295;Name=AL55_RS25295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25295;old_locus_tag=AL55_04052 NZ_KK316830.1 Protein Homology CDS 161672 163165 . - 0 ID=cds-WP_003418921.1;Parent=gene-AL55_RS25295;Dbxref=GenBank:WP_003418921.1;Name=WP_003418921.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217997.1;locus_tag=AL55_RS25295;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003418921.1;transl_table=11 NZ_KK316830.1 RefSeq gene 163256 163945 . - . ID=gene-AL55_RS25300;Name=AL55_RS25300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25300;old_locus_tag=AL55_04053 NZ_KK316830.1 Protein Homology CDS 163256 163945 . - 0 ID=cds-WP_003418922.1;Parent=gene-AL55_RS25300;Dbxref=GenBank:WP_003418922.1;Name=WP_003418922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217998.1;locus_tag=AL55_RS25300;product=GAP family protein;protein_id=WP_003418922.1;transl_table=11 NZ_KK316830.1 RefSeq gene 164087 164869 . - . ID=gene-AL55_RS25305;Name=AL55_RS25305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25305;old_locus_tag=AL55_04054 NZ_KK316830.1 Protein Homology CDS 164087 164869 . - 0 ID=cds-WP_003418925.1;Parent=gene-AL55_RS25305;Dbxref=GenBank:WP_003418925.1;Name=WP_003418925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217999.1;locus_tag=AL55_RS25305;product=DUF2510 domain-containing protein;protein_id=WP_003418925.1;transl_table=11 NZ_KK316830.1 RefSeq pseudogene 164913 165576 . - . ID=gene-AL55_RS25310;Name=AL55_RS25310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS25310;old_locus_tag=AL55_04055;pseudo=true NZ_KK316830.1 Protein Homology CDS 164913 165576 . - 0 ID=cds-AL55_RS25310;Parent=gene-AL55_RS25310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218000.1;locus_tag=AL55_RS25310;product=LppP/LprE family lipoprotein;pseudo=true;transl_table=11 NZ_KK316830.1 RefSeq gene 165842 167380 . + . ID=gene-AL55_RS25315;Name=cpsA;gbkey=Gene;gene=cpsA;gene_biotype=protein_coding;locus_tag=AL55_RS25315;old_locus_tag=AL55_04056 NZ_KK316830.1 Protein Homology CDS 165842 167380 . + 0 ID=cds-WP_003900866.1;Parent=gene-AL55_RS25315;Dbxref=GenBank:WP_003900866.1;Name=WP_003900866.1;Ontology_term=GO:0070726,GO:0071555,GO:0005886;gbkey=CDS;gene=cpsA;go_component=plasma membrane|0005886||IEA;go_process=cell wall assembly|0070726||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218001.1;locus_tag=AL55_RS25315;product=LCP family protein;protein_id=WP_003900866.1;transl_table=11 NZ_KK316830.1 RefSeq gene 167386 168216 . - . ID=gene-AL55_RS25320;Name=AL55_RS25320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25320;old_locus_tag=AL55_04057 NZ_KK316830.1 Protein Homology CDS 167386 168216 . - 0 ID=cds-WP_003912250.1;Parent=gene-AL55_RS25320;Dbxref=GenBank:WP_003912250.1;Name=WP_003912250.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912250.1;locus_tag=AL55_RS25320;product=SDR family oxidoreductase;protein_id=WP_003912250.1;transl_table=11 NZ_KK316830.1 RefSeq gene 168536 168985 . + . ID=gene-AL55_RS25325;Name=AL55_RS25325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25325;old_locus_tag=AL55_04058 NZ_KK316830.1 Protein Homology CDS 168536 168985 . + 0 ID=cds-WP_003418942.1;Parent=gene-AL55_RS25325;Dbxref=GenBank:WP_003418942.1;Name=WP_003418942.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218003.1;locus_tag=AL55_RS25325;product=DoxX family protein;protein_id=WP_003418942.1;transl_table=11 NZ_KK316830.1 RefSeq gene 168938 170068 . - . ID=gene-AL55_RS25330;Name=lipF;gbkey=Gene;gene=lipF;gene_biotype=protein_coding;locus_tag=AL55_RS25330;old_locus_tag=AL55_04059 NZ_KK316830.1 Protein Homology CDS 168938 170068 . - 0 ID=cds-WP_014585415.1;Parent=gene-AL55_RS25330;Dbxref=GenBank:WP_014585415.1;Name=WP_014585415.1;gbkey=CDS;gene=lipF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912251.1;locus_tag=AL55_RS25330;product=carboxylesterase LipF;protein_id=WP_014585415.1;transl_table=11 NZ_KK316830.1 RefSeq gene 170431 170754 . + . ID=gene-AL55_RS25335;Name=AL55_RS25335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25335;old_locus_tag=AL55_04060 NZ_KK316830.1 Protein Homology CDS 170431 170754 . + 0 ID=cds-WP_003418948.1;Parent=gene-AL55_RS25335;Dbxref=GenBank:WP_003418948.1;Name=WP_003418948.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218005.1;locus_tag=AL55_RS25335;product=Rv3488 family transcriptional regulator;protein_id=WP_003418948.1;transl_table=11 NZ_KK316830.1 RefSeq gene 170836 171000 . + . ID=gene-AL55_RS25340;Name=AL55_RS25340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25340;old_locus_tag=AL55_04061 NZ_KK316830.1 Protein Homology CDS 170836 171000 . + 0 ID=cds-WP_003418950.1;Parent=gene-AL55_RS25340;Dbxref=GenBank:WP_003418950.1;Name=WP_003418950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218006.1;locus_tag=AL55_RS25340;product=hypothetical protein;protein_id=WP_003418950.1;transl_table=11 NZ_KK316830.1 RefSeq gene 171000 172502 . + . ID=gene-AL55_RS25345;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=AL55_RS25345;old_locus_tag=AL55_04062 NZ_KK316830.1 Protein Homology CDS 171000 172502 . + 0 ID=cds-WP_003911019.1;Parent=gene-AL55_RS25345;Dbxref=GenBank:WP_003911019.1;Name=WP_003911019.1;gbkey=CDS;gene=otsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218007.1;locus_tag=AL55_RS25345;product=trehalose-6-phosphate synthase;protein_id=WP_003911019.1;transl_table=11 NZ_KK316830.1 RefSeq gene 172654 173232 . + . ID=gene-AL55_RS25350;Name=AL55_RS25350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25350;old_locus_tag=AL55_04063 NZ_KK316830.1 Protein Homology CDS 172654 173232 . + 0 ID=cds-WP_003418954.1;Parent=gene-AL55_RS25350;Dbxref=GenBank:WP_003418954.1;Name=WP_003418954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218008.1;locus_tag=AL55_RS25350;product=hypothetical protein;protein_id=WP_003418954.1;transl_table=11 NZ_KK316830.1 RefSeq gene 173229 173711 . - . ID=gene-AL55_RS25355;Name=AL55_RS25355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25355;old_locus_tag=AL55_04064 NZ_KK316830.1 Protein Homology CDS 173229 173711 . - 0 ID=cds-WP_003418958.1;Parent=gene-AL55_RS25355;Dbxref=GenBank:WP_003418958.1;Name=WP_003418958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218009.1;locus_tag=AL55_RS25355;product=Mce associated protein;protein_id=WP_003418958.1;transl_table=11 NZ_KK316830.1 RefSeq gene 173711 174439 . - . ID=gene-AL55_RS25360;Name=AL55_RS25360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25360;old_locus_tag=AL55_04065 NZ_KK316830.1 Protein Homology CDS 173711 174439 . - 0 ID=cds-WP_003418960.1;Parent=gene-AL55_RS25360;Dbxref=GenBank:WP_003418960.1;Name=WP_003418960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218010.1;locus_tag=AL55_RS25360;product=mammalian cell entry protein;protein_id=WP_003418960.1;transl_table=11 NZ_KK316830.1 RefSeq gene 174439 176133 . - . ID=gene-AL55_RS25365;Name=AL55_RS25365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25365;old_locus_tag=AL55_04066 NZ_KK316830.1 Protein Homology CDS 174439 176133 . - 0 ID=cds-WP_003418963.1;Parent=gene-AL55_RS25365;Dbxref=GenBank:WP_003418963.1;Name=WP_003418963.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218011.1;locus_tag=AL55_RS25365;product=virulence factor Mce family protein;protein_id=WP_003418963.1;transl_table=11 NZ_KK316830.1 RefSeq gene 176144 177298 . - . ID=gene-AL55_RS25370;Name=lprN;gbkey=Gene;gene=lprN;gene_biotype=protein_coding;locus_tag=AL55_RS25370;old_locus_tag=AL55_04067 NZ_KK316830.1 Protein Homology CDS 176144 177298 . - 0 ID=cds-WP_003418964.1;Parent=gene-AL55_RS25370;Dbxref=GenBank:WP_003418964.1;Name=WP_003418964.1;gbkey=CDS;gene=lprN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218012.1;locus_tag=AL55_RS25370;product=Mce family lipoprotein LprN;protein_id=WP_003418964.1;transl_table=11 NZ_KK316830.1 RefSeq gene 177295 178650 . - . ID=gene-AL55_RS25375;Name=AL55_RS25375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25375;old_locus_tag=AL55_04068 NZ_KK316830.1 Protein Homology CDS 177295 178650 . - 0 ID=cds-WP_003418966.1;Parent=gene-AL55_RS25375;Dbxref=GenBank:WP_003418966.1;Name=WP_003418966.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218013.1;locus_tag=AL55_RS25375;product=virulence factor Mce family protein;protein_id=WP_003418966.1;transl_table=11 NZ_KK316830.1 RefSeq gene 178647 179720 . - . ID=gene-AL55_RS25380;Name=AL55_RS25380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25380;old_locus_tag=AL55_04069 NZ_KK316830.1 Protein Homology CDS 178647 179720 . - 0 ID=cds-WP_003906120.1;Parent=gene-AL55_RS25380;Dbxref=GenBank:WP_003906120.1;Name=WP_003906120.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218014.1;locus_tag=AL55_RS25380;product=virulence factor Mce family protein;protein_id=WP_003906120.1;transl_table=11 NZ_KK316830.1 RefSeq gene 179710 180762 . - . ID=gene-AL55_RS25385;Name=AL55_RS25385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25385;old_locus_tag=AL55_04070 NZ_KK316830.1 Protein Homology CDS 179710 180762 . - 0 ID=cds-WP_003418972.1;Parent=gene-AL55_RS25385;Dbxref=GenBank:WP_003418972.1;Name=WP_003418972.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218015.1;locus_tag=AL55_RS25385;product=virulence factor Mce family protein;protein_id=WP_003418972.1;transl_table=11 NZ_KK316830.1 RefSeq gene 180762 181964 . - . ID=gene-AL55_RS25390;Name=mce4A;gbkey=Gene;gene=mce4A;gene_biotype=protein_coding;locus_tag=AL55_RS25390;old_locus_tag=AL55_04071 NZ_KK316830.1 Protein Homology CDS 180762 181964 . - 0 ID=cds-WP_003418979.1;Parent=gene-AL55_RS25390;Dbxref=GenBank:WP_003418979.1;Name=WP_003418979.1;gbkey=CDS;gene=mce4A;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177977.1;locus_tag=AL55_RS25390;product=virulence factor Mce4A;protein_id=WP_003418979.1;transl_table=11 NZ_KK316830.1 RefSeq gene 181984 182826 . - . ID=gene-AL55_RS25395;Name=AL55_RS25395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25395;old_locus_tag=AL55_04072 NZ_KK316830.1 Protein Homology CDS 181984 182826 . - 0 ID=cds-WP_003418983.1;Parent=gene-AL55_RS25395;Dbxref=GenBank:WP_003418983.1;Name=WP_003418983.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218017.1;locus_tag=AL55_RS25395;product=ABC transporter permease;protein_id=WP_003418983.1;transl_table=11 NZ_KK316830.1 RefSeq gene 182861 183625 . - . ID=gene-AL55_RS25400;Name=AL55_RS25400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25400;old_locus_tag=AL55_04073 NZ_KK316830.1 Protein Homology CDS 182861 183625 . - 0 ID=cds-WP_003418986.1;Parent=gene-AL55_RS25400;Dbxref=GenBank:WP_003418986.1;Name=WP_003418986.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218018.1;locus_tag=AL55_RS25400;product=MlaE family ABC transporter permease;protein_id=WP_003418986.1;transl_table=11 NZ_KK316830.1 RefSeq gene 183851 184804 . - . ID=gene-AL55_RS25405;Name=AL55_RS25405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25405;old_locus_tag=AL55_04074 NZ_KK316830.1 Protein Homology CDS 183851 184804 . - 0 ID=cds-WP_003418990.1;Parent=gene-AL55_RS25405;Dbxref=GenBank:WP_003418990.1;Name=WP_003418990.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218019.1;locus_tag=AL55_RS25405;product=3-oxoacyl-ACP reductase;protein_id=WP_003418990.1;transl_table=11 NZ_KK316830.1 RefSeq gene 184829 185020 . - . ID=gene-AL55_RS25410;Name=fdxD;gbkey=Gene;gene=fdxD;gene_biotype=protein_coding;locus_tag=AL55_RS25410;old_locus_tag=AL55_04075 NZ_KK316830.1 Protein Homology CDS 184829 185020 . - 0 ID=cds-WP_003418993.1;Parent=gene-AL55_RS25410;Dbxref=GenBank:WP_003418993.1;Name=WP_003418993.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;gene=fdxD;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218020.1;locus_tag=AL55_RS25410;product=ferredoxin;protein_id=WP_003418993.1;transl_table=11 NZ_KK316830.1 RefSeq gene 185235 186437 . + . ID=gene-AL55_RS25415;Name=AL55_RS25415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25415;old_locus_tag=AL55_04076 NZ_KK316830.1 Protein Homology CDS 185235 186437 . + 0 ID=cds-WP_003418997.1;Parent=gene-AL55_RS25415;Dbxref=GenBank:WP_003418997.1;Name=WP_003418997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218021.1;locus_tag=AL55_RS25415;product=acyl-CoA dehydrogenase;protein_id=WP_003418997.1;transl_table=11 NZ_KK316830.1 RefSeq gene 186462 187583 . + . ID=gene-AL55_RS25420;Name=AL55_RS25420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25420;old_locus_tag=AL55_04077 NZ_KK316830.1 Protein Homology CDS 186462 187583 . + 0 ID=cds-WP_003419000.1;Parent=gene-AL55_RS25420;Dbxref=GenBank:WP_003419000.1;Name=WP_003419000.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218022.1;locus_tag=AL55_RS25420;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003419000.1;transl_table=11 NZ_KK316830.1 RefSeq gene 187654 189162 . + . ID=gene-AL55_RS25425;Name=fadD17;gbkey=Gene;gene=fadD17;gene_biotype=protein_coding;locus_tag=AL55_RS25425;old_locus_tag=AL55_04078 NZ_KK316830.1 Protein Homology CDS 187654 189162 . + 0 ID=cds-WP_003901655.1;Parent=gene-AL55_RS25425;Dbxref=GenBank:WP_003901655.1;Name=WP_003901655.1;gbkey=CDS;gene=fadD17;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218023.1;locus_tag=AL55_RS25425;product=long-chain-fatty-acid--CoA ligase FadD17;protein_id=WP_003901655.1;transl_table=11 NZ_KK316830.1 RefSeq pseudogene 189333 193030 . + . ID=gene-AL55_RS0105805;Name=AL55_RS0105805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL55_RS0105805;pseudo=true NZ_KK316830.1 Protein Homology CDS 189333 193030 . + 0 ID=cds-AL55_RS0105805;Parent=gene-AL55_RS0105805;Note=frameshifted;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177978.1;locus_tag=AL55_RS0105805;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316830.1 RefSeq gene 193321 194150 . + . ID=gene-AL55_RS0105810;Name=AL55_RS0105810;end_range=194150,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS0105810;partial=true NZ_KK316830.1 Protein Homology CDS 193321 194150 . + 0 ID=cds-WP_031708885.1;Parent=gene-AL55_RS0105810;Dbxref=GenBank:WP_031708885.1;Name=WP_031708885.1;Ontology_term=GO:0005576,GO:0009986;end_range=194150,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177763.1;locus_tag=AL55_RS0105810;partial=true;product=PE family protein;protein_id=WP_031708885.1;transl_table=11 ##sequence-region NZ_KK316831.1 1 7022 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448434 NZ_KK316831.1 RefSeq region 1 7022 . + . ID=NZ_KK316831.1:1..7022;Dbxref=taxon:1448434;collection-date=2013-04-16;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0100 NZ_KK316831.1 RefSeq gene 1 2361 . + . ID=gene-AL55_RS25430;Name=AL55_RS25430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25430;old_locus_tag=AL55_04080;partial=true;start_range=.,1 NZ_KK316831.1 Protein Homology CDS 1 2361 . + 0 ID=cds-WP_192928781.1;Parent=gene-AL55_RS25430;Dbxref=GenBank:WP_192928781.1;Name=WP_192928781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177979.1;locus_tag=AL55_RS25430;partial=true;product=hypothetical protein;protein_id=WP_192928781.1;start_range=.,1;transl_table=11 NZ_KK316831.1 RefSeq gene 2528 4075 . - . ID=gene-AL55_RS25435;Name=AL55_RS25435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25435;old_locus_tag=AL55_04081 NZ_KK316831.1 Protein Homology CDS 2528 4075 . - 0 ID=cds-WP_003900872.1;Parent=gene-AL55_RS25435;Dbxref=GenBank:WP_003900872.1;Name=WP_003900872.1;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218026.1;locus_tag=AL55_RS25435;product=acetolactate synthase large subunit;protein_id=WP_003900872.1;transl_table=11 NZ_KK316831.1 RefSeq gene 4072 4908 . - . ID=gene-AL55_RS25440;Name=AL55_RS25440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25440;old_locus_tag=AL55_04082 NZ_KK316831.1 Protein Homology CDS 4072 4908 . - 0 ID=cds-WP_003421145.1;Parent=gene-AL55_RS25440;Dbxref=GenBank:WP_003421145.1;Name=WP_003421145.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218027.1;locus_tag=AL55_RS25440;product=amidohydrolase family protein;protein_id=WP_003421145.1;transl_table=11 NZ_KK316831.1 RefSeq gene 5268 7022 . + . ID=gene-AL55_RS25445;Name=AL55_RS25445;end_range=7022,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25445;old_locus_tag=AL55_04083;partial=true NZ_KK316831.1 Protein Homology CDS 5268 7022 . + 0 ID=cds-WP_031651828.1;Parent=gene-AL55_RS25445;Dbxref=GenBank:WP_031651828.1;Name=WP_031651828.1;Ontology_term=GO:0005576,GO:0009986;end_range=7022,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177980.1;locus_tag=AL55_RS25445;partial=true;product=PE family protein;protein_id=WP_031651828.1;transl_table=11 ##sequence-region NZ_KK316832.1 1 1070 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448434 NZ_KK316832.1 RefSeq region 1 1070 . + . ID=NZ_KK316832.1:1..1070;Dbxref=taxon:1448434;collection-date=2013-04-16;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0100 NZ_KK316832.1 RefSeq gene 1 917 . - . ID=gene-AL55_RS25450;Name=AL55_RS25450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL55_RS25450;old_locus_tag=AL55_04084;partial=true;start_range=.,1 NZ_KK316832.1 Protein Homology CDS 1 917 . - 0 ID=cds-WP_031647459.1;Parent=gene-AL55_RS25450;Dbxref=GenBank:WP_031647459.1;Name=WP_031647459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009975725.1;locus_tag=AL55_RS25450;partial=true;product=HAMP domain-containing protein;protein_id=WP_031647459.1;start_range=.,1;transl_table=11 ###