##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build Myco_tube_TKK_03_0105_V1 #!genome-build-accession NCBI_Assembly:GCF_000652015.1 #!annotation-date 06/29/2025 09:44:15 #!annotation-source NCBI RefSeq GCF_000652015.1-RS_2025_06_29 ##sequence-region NZ_KK316846.1 1 825573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316846.1 RefSeq region 1 825573 . + . ID=NZ_KK316846.1:1..825573;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316846.1 RefSeq gene 1 2441 . - . ID=gene-AL60_RS05700;Name=AL60_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05700;old_locus_tag=AL60_00001;partial=true;start_range=.,1 NZ_KK316846.1 Protein Homology CDS 1 2441 . - 0 ID=cds-WP_031721476.1;Parent=gene-AL60_RS05700;Dbxref=GenBank:WP_031721476.1;Name=WP_031721476.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177708.1;locus_tag=AL60_RS05700;partial=true;product=PE family protein;protein_id=WP_031721476.1;start_range=.,1;transl_table=11 NZ_KK316846.1 RefSeq gene 2732 4342 . + . ID=gene-AL60_RS05705;Name=AL60_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05705;old_locus_tag=AL60_00002 NZ_KK316846.1 Protein Homology CDS 2732 4342 . + 0 ID=cds-WP_010950374.1;Parent=gene-AL60_RS05705;Dbxref=GenBank:WP_010950374.1;Name=WP_010950374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177709.1;locus_tag=AL60_RS05705;product=PPE family protein;protein_id=WP_010950374.1;transl_table=11 NZ_KK316846.1 RefSeq gene 4366 5274 . + . ID=gene-AL60_RS05710;Name=AL60_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05710;old_locus_tag=AL60_00003 NZ_KK316846.1 Protein Homology CDS 4366 5274 . + 0 ID=cds-WP_003401448.1;Parent=gene-AL60_RS05710;Dbxref=GenBank:WP_003401448.1;Name=WP_003401448.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214795.1;locus_tag=AL60_RS05710;product=class I SAM-dependent methyltransferase;protein_id=WP_003401448.1;transl_table=11 NZ_KK316846.1 RefSeq gene 5531 7393 . + . ID=gene-AL60_RS05715;Name=eccA3;gbkey=Gene;gene=eccA3;gene_biotype=protein_coding;locus_tag=AL60_RS05715;old_locus_tag=AL60_00004 NZ_KK316846.1 Protein Homology CDS 5531 7393 . + 0 ID=cds-WP_003911145.1;Parent=gene-AL60_RS05715;Dbxref=GenBank:WP_003911145.1;Name=WP_003911145.1;gbkey=CDS;gene=eccA3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911145.1;locus_tag=AL60_RS05715;product=type VII secretion system ESX-3 AAA family ATPase EccA3;protein_id=WP_003911145.1;transl_table=11 NZ_KK316846.1 RefSeq gene 7390 9006 . + . ID=gene-AL60_RS05720;Name=eccB3;gbkey=Gene;gene=eccB3;gene_biotype=protein_coding;locus_tag=AL60_RS05720;old_locus_tag=AL60_00005 NZ_KK316846.1 Protein Homology CDS 7390 9006 . + 0 ID=cds-WP_003401472.1;Parent=gene-AL60_RS05720;Dbxref=GenBank:WP_003401472.1;Name=WP_003401472.1;gbkey=CDS;gene=eccB3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214797.1;locus_tag=AL60_RS05720;product=type VII secretion system ESX-3 subunit EccB3;protein_id=WP_003401472.1;transl_table=11 NZ_KK316846.1 RefSeq gene 9003 12995 . + . ID=gene-AL60_RS05725;Name=eccC3;gbkey=Gene;gene=eccC3;gene_biotype=protein_coding;locus_tag=AL60_RS05725;old_locus_tag=AL60_00006 NZ_KK316846.1 Protein Homology CDS 9003 12995 . + 0 ID=cds-WP_003401478.1;Parent=gene-AL60_RS05725;Dbxref=GenBank:WP_003401478.1;Name=WP_003401478.1;gbkey=CDS;gene=eccC3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214798.1;locus_tag=AL60_RS05725;product=type VII secretion system ESX-3 FtsK/SpoIIIE family ATPase EccC3;protein_id=WP_003401478.1;transl_table=11 NZ_KK316846.1 RefSeq gene 12992 13300 . + . ID=gene-AL60_RS05730;Name=AL60_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05730;old_locus_tag=AL60_00007 NZ_KK316846.1 Protein Homology CDS 12992 13300 . + 0 ID=cds-WP_003401485.1;Parent=gene-AL60_RS05730;Dbxref=GenBank:WP_003401485.1;Name=WP_003401485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177710.1;locus_tag=AL60_RS05730;product=type VII secretion system ESX-3 target PE5;protein_id=WP_003401485.1;transl_table=11 NZ_KK316846.1 RefSeq gene 13303 14844 . + . ID=gene-AL60_RS05735;Name=AL60_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05735;old_locus_tag=AL60_00008 NZ_KK316846.1 Protein Homology CDS 13303 14844 . + 0 ID=cds-WP_003401488.1;Parent=gene-AL60_RS05735;Dbxref=GenBank:WP_003401488.1;Name=WP_003401488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177711.1;locus_tag=AL60_RS05735;product=type VII secretion system ESX-3 target PPE4;protein_id=WP_003401488.1;transl_table=11 NZ_KK316846.1 RefSeq gene 14893 15186 . + . ID=gene-AL60_RS05740;Name=esxG;gbkey=Gene;gene=esxG;gene_biotype=protein_coding;locus_tag=AL60_RS05740;old_locus_tag=AL60_00009 NZ_KK316846.1 Protein Homology CDS 14893 15186 . + 0 ID=cds-WP_003401503.1;Parent=gene-AL60_RS05740;Dbxref=GenBank:WP_003401503.1;Name=WP_003401503.1;gbkey=CDS;gene=esxG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214801.1;locus_tag=AL60_RS05740;product=type VII secretion system protein EsxG;protein_id=WP_003401503.1;transl_table=11 NZ_KK316846.1 RefSeq gene 15216 15506 . + . ID=gene-AL60_RS05745;Name=esxH;gbkey=Gene;gene=esxH;gene_biotype=protein_coding;locus_tag=AL60_RS05745;old_locus_tag=AL60_00010 NZ_KK316846.1 Protein Homology CDS 15216 15506 . + 0 ID=cds-WP_003401514.1;Parent=gene-AL60_RS05745;Dbxref=GenBank:WP_003401514.1;Name=WP_003401514.1;gbkey=CDS;gene=esxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214802.1;locus_tag=AL60_RS05745;product=type VII secretion system effector EsxH;protein_id=WP_003401514.1;transl_table=11 NZ_KK316846.1 RefSeq gene 15517 16404 . + . ID=gene-AL60_RS05750;Name=espG3;gbkey=Gene;gene=espG3;gene_biotype=protein_coding;locus_tag=AL60_RS05750;old_locus_tag=AL60_00011 NZ_KK316846.1 Protein Homology CDS 15517 16404 . + 0 ID=cds-WP_003401521.1;Parent=gene-AL60_RS05750;Dbxref=GenBank:WP_003401521.1;Name=WP_003401521.1;gbkey=CDS;gene=espG3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214803.1;locus_tag=AL60_RS05750;product=type VII secretion system ESX-3 associated protein EspG3;protein_id=WP_003401521.1;transl_table=11 NZ_KK316846.1 RefSeq gene 16451 17869 . + . ID=gene-AL60_RS05755;Name=eccD3;gbkey=Gene;gene=eccD3;gene_biotype=protein_coding;locus_tag=AL60_RS05755;old_locus_tag=AL60_00012 NZ_KK316846.1 Protein Homology CDS 16451 17869 . + 0 ID=cds-WP_003401524.1;Parent=gene-AL60_RS05755;Dbxref=GenBank:WP_003401524.1;Name=WP_003401524.1;gbkey=CDS;gene=eccD3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214804.1;locus_tag=AL60_RS05755;product=type VII secretion system ESX-3 subunit EccD3;protein_id=WP_003401524.1;transl_table=11 NZ_KK316846.1 RefSeq gene 17866 19251 . + . ID=gene-AL60_RS05760;Name=mycP3;gbkey=Gene;gene=mycP3;gene_biotype=protein_coding;locus_tag=AL60_RS05760;old_locus_tag=AL60_00013 NZ_KK316846.1 Protein Homology CDS 17866 19251 . + 0 ID=cds-WP_003401528.1;Parent=gene-AL60_RS05760;Dbxref=GenBank:WP_003401528.1;Name=WP_003401528.1;gbkey=CDS;gene=mycP3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214805.1;locus_tag=AL60_RS05760;product=type VII secretion system ESX-3 serine protease mycosin MycP3;protein_id=WP_003401528.1;transl_table=11 NZ_KK316846.1 RefSeq gene 19248 20243 . + . ID=gene-AL60_RS05765;Name=eccE3;gbkey=Gene;gene=eccE3;gene_biotype=protein_coding;locus_tag=AL60_RS05765;old_locus_tag=AL60_00014 NZ_KK316846.1 Protein Homology CDS 19248 20243 . + 0 ID=cds-WP_003401533.1;Parent=gene-AL60_RS05765;Dbxref=GenBank:WP_003401533.1;Name=WP_003401533.1;gbkey=CDS;gene=eccE3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214806.1;locus_tag=AL60_RS05765;product=type VII secretion system ESX-3 subunit EccE3;protein_id=WP_003401533.1;transl_table=11 NZ_KK316846.1 RefSeq gene 20230 21432 . - . ID=gene-AL60_RS05770;Name=AL60_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05770;old_locus_tag=AL60_00015 NZ_KK316846.1 Protein Homology CDS 20230 21432 . - 0 ID=cds-WP_003898396.1;Parent=gene-AL60_RS05770;Dbxref=GenBank:WP_003898396.1;Name=WP_003898396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214807.1;locus_tag=AL60_RS05770;product=alpha/beta fold hydrolase;protein_id=WP_003898396.1;transl_table=11 NZ_KK316846.1 RefSeq gene 21539 22324 . + . ID=gene-AL60_RS05775;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=AL60_RS05775;old_locus_tag=AL60_00016 NZ_KK316846.1 Protein Homology CDS 21539 22324 . + 0 ID=cds-WP_003401538.1;Parent=gene-AL60_RS05775;Dbxref=GenBank:WP_003401538.1;Name=WP_003401538.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214808.1;locus_tag=AL60_RS05775;product=trans-aconitate 2-methyltransferase;protein_id=WP_003401538.1;transl_table=11 NZ_KK316846.1 RefSeq gene 22313 23116 . - . ID=gene-AL60_RS05780;Name=stf0;gbkey=Gene;gene=stf0;gene_biotype=protein_coding;locus_tag=AL60_RS05780;old_locus_tag=AL60_00017 NZ_KK316846.1 Protein Homology CDS 22313 23116 . - 0 ID=cds-WP_003401540.1;Parent=gene-AL60_RS05780;Dbxref=GenBank:WP_003401540.1;Name=WP_003401540.1;Ontology_term=GO:0016740;gbkey=CDS;gene=stf0;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214809.1;locus_tag=AL60_RS05780;product=trehalose 2-sulfotransferase;protein_id=WP_003401540.1;transl_table=11 NZ_KK316846.1 RefSeq gene 23126 24523 . - . ID=gene-AL60_RS05785;Name=AL60_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05785;old_locus_tag=AL60_00018 NZ_KK316846.1 Protein Homology CDS 23126 24523 . - 0 ID=cds-WP_003401544.1;Parent=gene-AL60_RS05785;Dbxref=GenBank:WP_003401544.1;Name=WP_003401544.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177712.1;locus_tag=AL60_RS05785;product=sulfatase family protein;protein_id=WP_003401544.1;transl_table=11 NZ_KK316846.1 RefSeq gene 24702 26477 . + . ID=gene-AL60_RS05790;Name=AL60_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05790;old_locus_tag=AL60_00019 NZ_KK316846.1 Protein Homology CDS 24702 26477 . + 0 ID=cds-WP_031685254.1;Parent=gene-AL60_RS05790;Dbxref=GenBank:WP_031685254.1;Name=WP_031685254.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177713.1;locus_tag=AL60_RS05790;product=PE family protein;protein_id=WP_031685254.1;transl_table=11 NZ_KK316846.1 RefSeq gene 26620 26847 . + . ID=gene-AL60_RS05795;Name=AL60_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05795;old_locus_tag=AL60_00020 NZ_KK316846.1 Protein Homology CDS 26620 26847 . + 0 ID=cds-WP_003401555.1;Parent=gene-AL60_RS05795;Dbxref=GenBank:WP_003401555.1;Name=WP_003401555.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214812.1;locus_tag=AL60_RS05795;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003401555.1;transl_table=11 NZ_KK316846.1 RefSeq gene 26844 27146 . + . ID=gene-AL60_RS05800;Name=AL60_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05800;old_locus_tag=AL60_00021 NZ_KK316846.1 Protein Homology CDS 26844 27146 . + 0 ID=cds-WP_003401560.1;Parent=gene-AL60_RS05800;Dbxref=GenBank:WP_003401560.1;Name=WP_003401560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214813.1;locus_tag=AL60_RS05800;product=toxin-antitoxin system toxin;protein_id=WP_003401560.1;transl_table=11 NZ_KK316846.1 RefSeq gene 27194 27415 . + . ID=gene-AL60_RS05805;Name=vapB2;gbkey=Gene;gene=vapB2;gene_biotype=protein_coding;locus_tag=AL60_RS05805;old_locus_tag=AL60_00022 NZ_KK316846.1 Protein Homology CDS 27194 27415 . + 0 ID=cds-WP_003401563.1;Parent=gene-AL60_RS05805;Dbxref=GenBank:WP_003401563.1;Name=WP_003401563.1;gbkey=CDS;gene=vapB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214814.1;locus_tag=AL60_RS05805;product=type II toxin-antitoxin system antitoxin VapB2;protein_id=WP_003401563.1;transl_table=11 NZ_KK316846.1 RefSeq gene 27412 27837 . + . ID=gene-AL60_RS05810;Name=AL60_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05810;old_locus_tag=AL60_00023 NZ_KK316846.1 Protein Homology CDS 27412 27837 . + 0 ID=cds-WP_003401566.1;Parent=gene-AL60_RS05810;Dbxref=GenBank:WP_003401566.1;Name=WP_003401566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214815.1;locus_tag=AL60_RS05810;product=PIN domain nuclease;protein_id=WP_003401566.1;transl_table=11 NZ_KK316846.1 RefSeq gene 27973 28605 . + . ID=gene-AL60_RS05815;Name=AL60_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05815;old_locus_tag=AL60_00024 NZ_KK316846.1 Protein Homology CDS 27973 28605 . + 0 ID=cds-WP_003401571.1;Parent=gene-AL60_RS05815;Dbxref=GenBank:WP_003401571.1;Name=WP_003401571.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214816.1;locus_tag=AL60_RS05815;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401571.1;transl_table=11 NZ_KK316846.1 RefSeq gene 28602 29510 . + . ID=gene-AL60_RS05820;Name=AL60_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05820;old_locus_tag=AL60_00025 NZ_KK316846.1 Protein Homology CDS 28602 29510 . + 0 ID=cds-WP_003900117.1;Parent=gene-AL60_RS05820;Dbxref=GenBank:WP_003900117.1;Name=WP_003900117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214817.1;locus_tag=AL60_RS05820;product=protochlorophyllide reductase;protein_id=WP_003900117.1;transl_table=11 NZ_KK316846.1 RefSeq gene 29518 39018 . - . ID=gene-AL60_RS05825;Name=AL60_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05825;old_locus_tag=AL60_00026 NZ_KK316846.1 Protein Homology CDS 29518 39018 . - 0 ID=cds-WP_012054232.1;Parent=gene-AL60_RS05825;Dbxref=GenBank:WP_012054232.1;Name=WP_012054232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913099.1;locus_tag=AL60_RS05825;product=PPE domain-containing protein;protein_id=WP_012054232.1;transl_table=11 NZ_KK316846.1 RefSeq gene 39221 39892 . + . ID=gene-AL60_RS05830;Name=bluB;gbkey=Gene;gene=bluB;gene_biotype=protein_coding;locus_tag=AL60_RS05830;old_locus_tag=AL60_00027 NZ_KK316846.1 Protein Homology CDS 39221 39892 . + 0 ID=cds-WP_003401584.1;Parent=gene-AL60_RS05830;Dbxref=GenBank:WP_003401584.1;Name=WP_003401584.1;Ontology_term=GO:0009236,GO:0032363,GO:0016722;gbkey=CDS;gene=bluB;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,FMN catabolic process|0032363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214820.1;locus_tag=AL60_RS05830;product=5%2C6-dimethylbenzimidazole synthase;protein_id=WP_003401584.1;transl_table=11 NZ_KK316846.1 RefSeq gene 39880 40362 . - . ID=gene-AL60_RS05835;Name=AL60_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05835;old_locus_tag=AL60_00028 NZ_KK316846.1 Protein Homology CDS 39880 40362 . - 0 ID=cds-WP_003401589.1;Parent=gene-AL60_RS05835;Dbxref=GenBank:WP_003401589.1;Name=WP_003401589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214821.1;locus_tag=AL60_RS05835;product=hypothetical protein;protein_id=WP_003401589.1;transl_table=11 NZ_KK316846.1 RefSeq gene 40420 41136 . + . ID=gene-AL60_RS05840;Name=AL60_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05840;old_locus_tag=AL60_00029 NZ_KK316846.1 Protein Homology CDS 40420 41136 . + 0 ID=cds-WP_003401594.1;Parent=gene-AL60_RS05840;Dbxref=GenBank:WP_003401594.1;Name=WP_003401594.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214822.1;locus_tag=AL60_RS05840;product=phosphatase PAP2 family protein;protein_id=WP_003401594.1;transl_table=11 NZ_KK316846.1 RefSeq gene 41238 41894 . + . ID=gene-AL60_RS05845;Name=AL60_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05845;old_locus_tag=AL60_00030 NZ_KK316846.1 Protein Homology CDS 41238 41894 . + 0 ID=cds-WP_003401597.1;Parent=gene-AL60_RS05845;Dbxref=GenBank:WP_003401597.1;Name=WP_003401597.1;Ontology_term=GO:0018104,GO:0071972;gbkey=CDS;go_function=peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214823.1;locus_tag=AL60_RS05845;product=L%2CD-transpeptidase family protein;protein_id=WP_003401597.1;transl_table=11 NZ_KK316846.1 RefSeq gene 41964 42455 . - . ID=gene-AL60_RS05850;Name=AL60_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05850;old_locus_tag=AL60_00031 NZ_KK316846.1 Protein Homology CDS 41964 42455 . - 0 ID=cds-WP_003401601.1;Parent=gene-AL60_RS05850;Dbxref=GenBank:WP_003401601.1;Name=WP_003401601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214824.1;locus_tag=AL60_RS05850;product=nuclear transport factor 2 family protein;protein_id=WP_003401601.1;transl_table=11 NZ_KK316846.1 RefSeq gene 42479 43708 . + . ID=gene-AL60_RS05855;Name=AL60_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05855;old_locus_tag=AL60_00032 NZ_KK316846.1 Protein Homology CDS 42479 43708 . + 0 ID=cds-WP_003898398.1;Parent=gene-AL60_RS05855;Dbxref=GenBank:WP_003898398.1;Name=WP_003898398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214825.1;locus_tag=AL60_RS05855;product=hypothetical protein;protein_id=WP_003898398.1;transl_table=11 NZ_KK316846.1 RefSeq gene 43863 45725 . + . ID=gene-AL60_RS05860;Name=AL60_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05860;old_locus_tag=AL60_00033 NZ_KK316846.1 Protein Homology CDS 43863 45725 . + 0 ID=cds-WP_003900119.1;Parent=gene-AL60_RS05860;Dbxref=GenBank:WP_003900119.1;Name=WP_003900119.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214826.1;locus_tag=AL60_RS05860;product=Hsp70 family protein;protein_id=WP_003900119.1;transl_table=11 NZ_KK316846.1 RefSeq gene 45797 46183 . + . ID=gene-AL60_RS05865;Name=AL60_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05865;old_locus_tag=AL60_00034 NZ_KK316846.1 Protein Homology CDS 45797 46183 . + 0 ID=cds-WP_003401613.1;Parent=gene-AL60_RS05865;Dbxref=GenBank:WP_003401613.1;Name=WP_003401613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214827.1;locus_tag=AL60_RS05865;product=hypothetical protein;protein_id=WP_003401613.1;transl_table=11 NZ_KK316846.1 RefSeq gene 46186 46821 . - . ID=gene-AL60_RS05870;Name=AL60_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05870;old_locus_tag=AL60_00035 NZ_KK316846.1 Protein Homology CDS 46186 46821 . - 0 ID=cds-WP_003902950.1;Parent=gene-AL60_RS05870;Dbxref=GenBank:WP_003902950.1;Name=WP_003902950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873918.1;locus_tag=AL60_RS05870;product=DUF3060 domain-containing protein;protein_id=WP_003902950.1;transl_table=11 NZ_KK316846.1 RefSeq gene 46909 47793 . + . ID=gene-AL60_RS05875;Name=AL60_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05875;old_locus_tag=AL60_00036 NZ_KK316846.1 Protein Homology CDS 46909 47793 . + 0 ID=cds-WP_003401621.1;Parent=gene-AL60_RS05875;Dbxref=GenBank:WP_003401621.1;Name=WP_003401621.1;Ontology_term=GO:0005975,GO:0004553,GO:0030246;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214829.1;locus_tag=AL60_RS05875;product=glycoside hydrolase family 16 protein;protein_id=WP_003401621.1;transl_table=11 NZ_KK316846.1 RefSeq gene 47842 48456 . + . ID=gene-AL60_RS05880;Name=AL60_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05880;old_locus_tag=AL60_00037 NZ_KK316846.1 Protein Homology CDS 47842 48456 . + 0 ID=cds-WP_003401623.1;Parent=gene-AL60_RS05880;Dbxref=GenBank:WP_003401623.1;Name=WP_003401623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214830.1;locus_tag=AL60_RS05880;product=muconolactone Delta-isomerase family protein;protein_id=WP_003401623.1;transl_table=11 NZ_KK316846.1 RefSeq gene 48480 49250 . - . ID=gene-AL60_RS05885;Name=AL60_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05885;old_locus_tag=AL60_00038 NZ_KK316846.1 Protein Homology CDS 48480 49250 . - 0 ID=cds-WP_003401625.1;Parent=gene-AL60_RS05885;Dbxref=GenBank:WP_003401625.1;Name=WP_003401625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214831.1;locus_tag=AL60_RS05885;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_003401625.1;transl_table=11 NZ_KK316846.1 RefSeq gene 49511 49581 . - . ID=gene-AL60_RS05890;Name=AL60_RS05890;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS05890;old_locus_tag=AL60_00039 NZ_KK316846.1 tRNAscan-SE tRNA 49511 49581 . - . ID=rna-AL60_RS05890;Parent=gene-AL60_RS05890;anticodon=(pos:complement(49547..49549));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS05890;product=tRNA-Gly NZ_KK316846.1 tRNAscan-SE exon 49511 49581 . - . ID=exon-AL60_RS05890-1;Parent=rna-AL60_RS05890;anticodon=(pos:complement(49547..49549));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS05890;product=tRNA-Gly NZ_KK316846.1 RefSeq gene 49612 50406 . - . ID=gene-AL60_RS05895;Name=AL60_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05895;old_locus_tag=AL60_00040 NZ_KK316846.1 Protein Homology CDS 49612 50406 . - 0 ID=cds-WP_003401627.1;Parent=gene-AL60_RS05895;Dbxref=GenBank:WP_003401627.1;Name=WP_003401627.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177716.1;locus_tag=AL60_RS05895;product=ZIP family metal transporter;protein_id=WP_003401627.1;transl_table=11 NZ_KK316846.1 RefSeq gene 50455 51123 . + . ID=gene-AL60_RS05900;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=AL60_RS05900;old_locus_tag=AL60_00041 NZ_KK316846.1 Protein Homology CDS 50455 51123 . + 0 ID=cds-WP_003401632.1;Parent=gene-AL60_RS05900;Dbxref=GenBank:WP_003401632.1;Name=WP_003401632.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214833.1;locus_tag=AL60_RS05900;product=pyroglutamyl-peptidase I;protein_id=WP_003401632.1;transl_table=11 NZ_KK316846.1 RefSeq gene 51195 51857 . + . ID=gene-AL60_RS05905;Name=AL60_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05905;old_locus_tag=AL60_00042 NZ_KK316846.1 Protein Homology CDS 51195 51857 . + 0 ID=cds-WP_003401636.1;Parent=gene-AL60_RS05905;Dbxref=GenBank:WP_003401636.1;Name=WP_003401636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214834.1;locus_tag=AL60_RS05905;product=VldE C-terminal domain-containing protein;protein_id=WP_003401636.1;transl_table=11 NZ_KK316846.1 RefSeq gene 51889 52461 . + . ID=gene-AL60_RS05910;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AL60_RS05910;old_locus_tag=AL60_00043 NZ_KK316846.1 Protein Homology CDS 51889 52461 . + 0 ID=cds-WP_003898399.1;Parent=gene-AL60_RS05910;Dbxref=GenBank:WP_003898399.1;Name=WP_003898399.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214835.1;locus_tag=AL60_RS05910;product=dCTP deaminase;protein_id=WP_003898399.1;transl_table=11 NZ_KK316846.1 RefSeq gene 52567 53898 . + . ID=gene-AL60_RS05915;Name=udgA;gbkey=Gene;gene=udgA;gene_biotype=protein_coding;locus_tag=AL60_RS05915;old_locus_tag=AL60_00044 NZ_KK316846.1 Protein Homology CDS 52567 53898 . + 0 ID=cds-WP_003898400.1;Parent=gene-AL60_RS05915;Dbxref=GenBank:WP_003898400.1;Name=WP_003898400.1;Ontology_term=GO:0016616;gbkey=CDS;gene=udgA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214836.1;locus_tag=AL60_RS05915;product=UDP-glucose dehydrogenase family protein;protein_id=WP_003898400.1;transl_table=11 NZ_KK316846.1 RefSeq gene 53887 54558 . - . ID=gene-AL60_RS05920;Name=AL60_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05920;old_locus_tag=AL60_00045 NZ_KK316846.1 Protein Homology CDS 53887 54558 . - 0 ID=cds-WP_003401643.1;Parent=gene-AL60_RS05920;Dbxref=GenBank:WP_003401643.1;Name=WP_003401643.1;Ontology_term=GO:0006506,GO:0000225;gbkey=CDS;go_function=N-acetylglucosaminylphosphatidylinositol deacetylase activity|0000225||IEA;go_process=GPI anchor biosynthetic process|0006506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214837.1;locus_tag=AL60_RS05920;product=PIG-L family deacetylase;protein_id=WP_003401643.1;transl_table=11 NZ_KK316846.1 RefSeq gene 54659 55339 . + . ID=gene-AL60_RS05925;Name=AL60_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05925;old_locus_tag=AL60_00046 NZ_KK316846.1 Protein Homology CDS 54659 55339 . + 0 ID=cds-WP_003906339.1;Parent=gene-AL60_RS05925;Dbxref=GenBank:WP_003906339.1;Name=WP_003906339.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214838.1;locus_tag=AL60_RS05925;product=Rv0324 family HTH-type transcriptional regulator;protein_id=WP_003906339.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 55373 56035 . + . ID=gene-AL60_RS05935;Name=AL60_RS05935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS05935;old_locus_tag=AL60_00048;pseudo=true NZ_KK316846.1 Protein Homology CDS 55373 56035 . + 0 ID=cds-AL60_RS05935;Parent=gene-AL60_RS05935;Note=internal stop;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900903.1;locus_tag=AL60_RS05935;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 56003 57352 . - . ID=gene-AL60_RS05940;Name=AL60_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05940;old_locus_tag=AL60_00049 NZ_KK316846.1 Protein Homology CDS 56003 57352 . - 0 ID=cds-WP_031721477.1;Parent=gene-AL60_RS05940;Dbxref=GenBank:WP_031721477.1;Name=WP_031721477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214841.1;locus_tag=AL60_RS05940;product=cytochrome P450;protein_id=WP_031721477.1;transl_table=11 NZ_KK316846.1 RefSeq gene 57418 58020 . + . ID=gene-AL60_RS05945;Name=AL60_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05945;old_locus_tag=AL60_00050 NZ_KK316846.1 Protein Homology CDS 57418 58020 . + 0 ID=cds-WP_003401651.1;Parent=gene-AL60_RS05945;Dbxref=GenBank:WP_003401651.1;Name=WP_003401651.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214842.1;locus_tag=AL60_RS05945;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401651.1;transl_table=11 NZ_KK316846.1 RefSeq gene 58001 58627 . - . ID=gene-AL60_RS05950;Name=AL60_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05950;old_locus_tag=AL60_00051 NZ_KK316846.1 Protein Homology CDS 58001 58627 . - 0 ID=cds-WP_003401654.1;Parent=gene-AL60_RS05950;Dbxref=GenBank:WP_003401654.1;Name=WP_003401654.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214843.1;locus_tag=AL60_RS05950;product=class I SAM-dependent methyltransferase;protein_id=WP_003401654.1;transl_table=11 NZ_KK316846.1 RefSeq gene 58654 59394 . - . ID=gene-AL60_RS05955;Name=AL60_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05955;old_locus_tag=AL60_00052 NZ_KK316846.1 Protein Homology CDS 58654 59394 . - 0 ID=cds-WP_003401656.1;Parent=gene-AL60_RS05955;Dbxref=GenBank:WP_003401656.1;Name=WP_003401656.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214844.1;locus_tag=AL60_RS05955;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401656.1;transl_table=11 NZ_KK316846.1 RefSeq gene 59508 60674 . + . ID=gene-AL60_RS05960;Name=AL60_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05960;old_locus_tag=AL60_00053 NZ_KK316846.1 Protein Homology CDS 59508 60674 . + 0 ID=cds-WP_003900904.1;Parent=gene-AL60_RS05960;Dbxref=GenBank:WP_003900904.1;Name=WP_003900904.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214845.1;locus_tag=AL60_RS05960;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003900904.1;transl_table=11 NZ_KK316846.1 RefSeq gene 60779 61534 . + . ID=gene-AL60_RS05965;Name=AL60_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05965;old_locus_tag=AL60_00054 NZ_KK316846.1 Protein Homology CDS 60779 61534 . + 0 ID=cds-WP_003911158.1;Parent=gene-AL60_RS05965;Dbxref=GenBank:WP_003911158.1;Name=WP_003911158.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302514.1;locus_tag=AL60_RS05965;product=maleylpyruvate isomerase family mycothiol-dependent enzyme;protein_id=WP_003911158.1;transl_table=11 NZ_KK316846.1 RefSeq gene 61561 61935 . + . ID=gene-AL60_RS05970;Name=AL60_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05970;old_locus_tag=AL60_00055 NZ_KK316846.1 Protein Homology CDS 61561 61935 . + 0 ID=cds-WP_003401666.1;Parent=gene-AL60_RS05970;Dbxref=GenBank:WP_003401666.1;Name=WP_003401666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214847.1;locus_tag=AL60_RS05970;product=nuclear transport factor 2 family protein;protein_id=WP_003401666.1;transl_table=11 NZ_KK316846.1 RefSeq gene 61965 62831 . + . ID=gene-AL60_RS05975;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AL60_RS05975;old_locus_tag=AL60_00056 NZ_KK316846.1 Protein Homology CDS 61965 62831 . + 0 ID=cds-WP_003401670.1;Parent=gene-AL60_RS05975;Dbxref=GenBank:WP_003401670.1;Name=WP_003401670.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214848.1;locus_tag=AL60_RS05975;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_003401670.1;transl_table=11 NZ_KK316846.1 RefSeq gene 62842 63294 . - . ID=gene-AL60_RS27810;Name=AL60_RS27810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27810;old_locus_tag=AL60_00057 NZ_KK316846.1 Protein Homology CDS 62842 63294 . - 0 ID=cds-WP_003911159.1;Parent=gene-AL60_RS27810;Dbxref=GenBank:WP_003911159.1;Name=WP_003911159.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL60_RS27810;product=PE family protein PE6;protein_id=WP_003911159.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 63244 63361 . + . ID=gene-AL60_RS27375;Name=AL60_RS27375;end_range=63361,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27375;partial=true;pseudo=true;start_range=.,63244 NZ_KK316846.1 Protein Homology CDS 63244 63361 . + 0 ID=cds-AL60_RS27375;Parent=gene-AL60_RS27375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=63361,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=AL60_RS27375;partial=true;product=hypothetical protein;pseudo=true;start_range=.,63244;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 63475 65009 . + . ID=gene-AL60_RS05980;Name=AL60_RS05980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS05980;old_locus_tag=AL60_00058;pseudo=true NZ_KK316846.1 Protein Homology CDS 63475 65009 . + 0 ID=cds-AL60_RS05980;Parent=gene-AL60_RS05980;Note=frameshifted;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287795.1;locus_tag=AL60_RS05980;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 65179 66468 . - . ID=gene-AL60_RS05985;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=AL60_RS05985;old_locus_tag=AL60_00059 NZ_KK316846.1 Protein Homology CDS 65179 66468 . - 0 ID=cds-WP_003401733.1;Parent=gene-AL60_RS05985;Dbxref=GenBank:WP_003401733.1;Name=WP_003401733.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=aspC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214851.1;locus_tag=AL60_RS05985;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_003401733.1;transl_table=11 NZ_KK316846.1 RefSeq gene 66499 69147 . - . ID=gene-AL60_RS05990;Name=AL60_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS05990;old_locus_tag=AL60_00060 NZ_KK316846.1 Protein Homology CDS 66499 69147 . - 0 ID=cds-WP_003401734.1;Parent=gene-AL60_RS05990;Dbxref=GenBank:WP_003401734.1;Name=WP_003401734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214852.1;locus_tag=AL60_RS05990;product=(Fe-S)-binding protein;protein_id=WP_003401734.1;transl_table=11 NZ_KK316846.1 RefSeq gene 69256 71754 . - . ID=gene-AL60_RS05995;Name=iniR;gbkey=Gene;gene=iniR;gene_biotype=protein_coding;locus_tag=AL60_RS05995;old_locus_tag=AL60_00061 NZ_KK316846.1 Protein Homology CDS 69256 71754 . - 0 ID=cds-WP_003401735.1;Parent=gene-AL60_RS05995;Dbxref=GenBank:WP_003401735.1;Name=WP_003401735.1;gbkey=CDS;gene=iniR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214853.1;locus_tag=AL60_RS05995;product=isoniazid response ATPase/transcriptional regulator IniR;protein_id=WP_003401735.1;transl_table=11 NZ_KK316846.1 RefSeq gene 71940 72479 . + . ID=gene-AL60_RS06000;Name=AL60_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06000;old_locus_tag=AL60_00062 NZ_KK316846.1 Protein Homology CDS 71940 72479 . + 0 ID=cds-WP_003401737.1;Parent=gene-AL60_RS06000;Dbxref=GenBank:WP_003401737.1;Name=WP_003401737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214854.1;locus_tag=AL60_RS06000;product=Rv0340 family IniB-related protein;protein_id=WP_003401737.1;transl_table=11 NZ_KK316846.1 RefSeq gene 72668 74107 . + . ID=gene-AL60_RS06005;Name=iniB;gbkey=Gene;gene=iniB;gene_biotype=protein_coding;locus_tag=AL60_RS06005;old_locus_tag=AL60_00063 NZ_KK316846.1 Protein Homology CDS 72668 74107 . + 0 ID=cds-WP_003901837.1;Parent=gene-AL60_RS06005;Dbxref=GenBank:WP_003901837.1;Name=WP_003901837.1;gbkey=CDS;gene=iniB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214855.1;locus_tag=AL60_RS06005;product=isoniazid-induced protein IniB;protein_id=WP_003901837.1;transl_table=11 NZ_KK316846.1 RefSeq gene 74213 76066 . + . ID=gene-AL60_RS06010;Name=iniA;gbkey=Gene;gene=iniA;gene_biotype=protein_coding;locus_tag=AL60_RS06010;old_locus_tag=AL60_00064 NZ_KK316846.1 Protein Homology CDS 74213 76066 . + 0 ID=cds-WP_003911164.1;Parent=gene-AL60_RS06010;Dbxref=GenBank:WP_003911164.1;Name=WP_003911164.1;gbkey=CDS;gene=iniA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292084.1;locus_tag=AL60_RS06010;product=isoniazid-induced dynamin-like GTPase IniA;protein_id=WP_003911164.1;transl_table=11 NZ_KK316846.1 RefSeq gene 76063 77544 . + . ID=gene-AL60_RS06015;Name=iniC;gbkey=Gene;gene=iniC;gene_biotype=protein_coding;locus_tag=AL60_RS06015;old_locus_tag=AL60_00065 NZ_KK316846.1 Protein Homology CDS 76063 77544 . + 0 ID=cds-WP_003401747.1;Parent=gene-AL60_RS06015;Dbxref=GenBank:WP_003401747.1;Name=WP_003401747.1;gbkey=CDS;gene=iniC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214857.1;locus_tag=AL60_RS06015;product=isoniazid-induced dynamin-like GTPase IniC;protein_id=WP_003401747.1;transl_table=11 NZ_KK316846.1 RefSeq gene 77687 78247 . - . ID=gene-AL60_RS06020;Name=AL60_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06020;old_locus_tag=AL60_00066 NZ_KK316846.1 Protein Homology CDS 77687 78247 . - 0 ID=cds-WP_003401751.1;Parent=gene-AL60_RS06020;Dbxref=GenBank:WP_003401751.1;Name=WP_003401751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214858.1;locus_tag=AL60_RS06020;product=hypothetical protein;protein_id=WP_003401751.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 78350 78914 . + . ID=gene-AL60_RS06025;Name=AL60_RS06025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS06025;old_locus_tag=AL60_00067;pseudo=true NZ_KK316846.1 Protein Homology CDS 78350 78914 . + 0 ID=cds-AL60_RS06025;Parent=gene-AL60_RS06025;Note=frameshifted;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007167464.1;locus_tag=AL60_RS06025;product=nucleotidyltransferase family protein;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 78808 80271 . - . ID=gene-AL60_RS06030;Name=AL60_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06030;old_locus_tag=AL60_00068 NZ_KK316846.1 Protein Homology CDS 78808 80271 . - 0 ID=cds-WP_003898409.1;Parent=gene-AL60_RS06030;Dbxref=GenBank:WP_003898409.1;Name=WP_003898409.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177718.1;locus_tag=AL60_RS06030;product=amino acid permease;protein_id=WP_003898409.1;transl_table=11 NZ_KK316846.1 RefSeq gene 80784 81596 . + . ID=gene-AL60_RS06035;Name=AL60_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06035;old_locus_tag=AL60_00069 NZ_KK316846.1 Protein Homology CDS 80784 81596 . + 0 ID=cds-WP_003911187.1;Parent=gene-AL60_RS06035;Dbxref=GenBank:WP_003911187.1;Name=WP_003911187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911187.1;locus_tag=AL60_RS06035;product=TIGR04255 family protein;protein_id=WP_003911187.1;transl_table=11 NZ_KK316846.1 RefSeq gene 81599 82252 . + . ID=gene-AL60_RS06040;Name=mosR;gbkey=Gene;gene=mosR;gene_biotype=protein_coding;locus_tag=AL60_RS06040;old_locus_tag=AL60_00070 NZ_KK316846.1 Protein Homology CDS 81599 82252 . + 0 ID=cds-WP_003401756.1;Parent=gene-AL60_RS06040;Dbxref=GenBank:WP_003401756.1;Name=WP_003401756.1;gbkey=CDS;gene=mosR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214862.1;locus_tag=AL60_RS06040;product=hypoxia/intracellular survival transcriptional regulator MosR;protein_id=WP_003401756.1;transl_table=11 NZ_KK316846.1 RefSeq gene 82207 82425 . - . ID=gene-AL60_RS27380;Name=AL60_RS27380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27380 NZ_KK316846.1 Protein Homology CDS 82207 82425 . - 0 ID=cds-WP_003918061.1;Parent=gene-AL60_RS27380;Dbxref=GenBank:WP_003918061.1;Name=WP_003918061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918061.1;locus_tag=AL60_RS27380;product=hypothetical protein;protein_id=WP_003918061.1;transl_table=11 NZ_KK316846.1 RefSeq gene 82372 82914 . + . ID=gene-AL60_RS06045;Name=AL60_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06045;old_locus_tag=AL60_00071 NZ_KK316846.1 Protein Homology CDS 82372 82914 . + 0 ID=cds-WP_003401808.1;Parent=gene-AL60_RS06045;Dbxref=GenBank:WP_003401808.1;Name=WP_003401808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401808.1;locus_tag=AL60_RS06045;product=hypothetical protein;protein_id=WP_003401808.1;transl_table=11 NZ_KK316846.1 RefSeq gene 83141 85018 . + . ID=gene-AL60_RS06050;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AL60_RS06050;old_locus_tag=AL60_00072 NZ_KK316846.1 Protein Homology CDS 83141 85018 . + 0 ID=cds-WP_003401814.1;Parent=gene-AL60_RS06050;Dbxref=GenBank:WP_003401814.1;Name=WP_003401814.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214864.1;locus_tag=AL60_RS06050;product=molecular chaperone DnaK;protein_id=WP_003401814.1;transl_table=11 NZ_KK316846.1 RefSeq gene 85015 85722 . + . ID=gene-AL60_RS06055;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AL60_RS06055;old_locus_tag=AL60_00073 NZ_KK316846.1 Protein Homology CDS 85015 85722 . + 0 ID=cds-WP_003401817.1;Parent=gene-AL60_RS06055;Dbxref=GenBank:WP_003401817.1;Name=WP_003401817.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214865.1;locus_tag=AL60_RS06055;product=nucleotide exchange factor GrpE;protein_id=WP_003401817.1;transl_table=11 NZ_KK316846.1 RefSeq gene 85758 86945 . + . ID=gene-AL60_RS06060;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AL60_RS06060;old_locus_tag=AL60_00074 NZ_KK316846.1 Protein Homology CDS 85758 86945 . + 0 ID=cds-WP_003401821.1;Parent=gene-AL60_RS06060;Dbxref=GenBank:WP_003401821.1;Name=WP_003401821.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177719.1;locus_tag=AL60_RS06060;product=molecular chaperone DnaJ;protein_id=WP_003401821.1;transl_table=11 NZ_KK316846.1 RefSeq gene 86945 87325 . + . ID=gene-AL60_RS06065;Name=hspR;gbkey=Gene;gene=hspR;gene_biotype=protein_coding;locus_tag=AL60_RS06065;old_locus_tag=AL60_00075 NZ_KK316846.1 Protein Homology CDS 86945 87325 . + 0 ID=cds-WP_003401823.1;Parent=gene-AL60_RS06065;Dbxref=GenBank:WP_003401823.1;Name=WP_003401823.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hspR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214867.1;locus_tag=AL60_RS06065;product=heat shock protein transcriptional repressor HspR;protein_id=WP_003401823.1;transl_table=11 NZ_KK316846.1 RefSeq gene 87450 88001 . - . ID=gene-AL60_RS26710;Name=AL60_RS26710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26710;old_locus_tag=AL60_00076 NZ_KK316846.1 GeneMarkS-2+ CDS 87450 88001 . - 0 ID=cds-WP_003898412.1;Parent=gene-AL60_RS26710;Dbxref=GenBank:WP_003898412.1;Name=WP_003898412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS26710;product=hypothetical protein;protein_id=WP_003898412.1;transl_table=11 NZ_KK316846.1 RefSeq gene 88084 97971 . - . ID=gene-AL60_RS06070;Name=AL60_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06070;old_locus_tag=AL60_00077 NZ_KK316846.1 Protein Homology CDS 88084 97971 . - 0 ID=cds-WP_003900911.1;Parent=gene-AL60_RS06070;Dbxref=GenBank:WP_003900911.1;Name=WP_003900911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177721.2;locus_tag=AL60_RS06070;product=PPE family protein;protein_id=WP_003900911.1;transl_table=11 NZ_KK316846.1 RefSeq gene 98122 98766 . - . ID=gene-AL60_RS06075;Name=AL60_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06075;old_locus_tag=AL60_00078 NZ_KK316846.1 Protein Homology CDS 98122 98766 . - 0 ID=cds-WP_003401827.1;Parent=gene-AL60_RS06075;Dbxref=GenBank:WP_003401827.1;Name=WP_003401827.1;Ontology_term=GO:0016790,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214870.1;locus_tag=AL60_RS06075;product=PaaI family thioesterase;protein_id=WP_003401827.1;transl_table=11 NZ_KK316846.1 RefSeq gene 98763 100061 . - . ID=gene-AL60_RS06080;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=AL60_RS06080;old_locus_tag=AL60_00079 NZ_KK316846.1 Protein Homology CDS 98763 100061 . - 0 ID=cds-WP_003401829.1;Parent=gene-AL60_RS06080;Dbxref=GenBank:WP_003401829.1;Name=WP_003401829.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214871.1;locus_tag=AL60_RS06080;product=adenylosuccinate synthase;protein_id=WP_003401829.1;transl_table=11 NZ_KK316846.1 RefSeq gene 100152 100799 . + . ID=gene-AL60_RS06085;Name=AL60_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06085;old_locus_tag=AL60_00080 NZ_KK316846.1 Protein Homology CDS 100152 100799 . + 0 ID=cds-WP_003401831.1;Parent=gene-AL60_RS06085;Dbxref=GenBank:WP_003401831.1;Name=WP_003401831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214872.1;locus_tag=AL60_RS06085;product=hypothetical protein;protein_id=WP_003401831.1;transl_table=11 NZ_KK316846.1 RefSeq gene 100810 101589 . + . ID=gene-AL60_RS06090;Name=AL60_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06090;old_locus_tag=AL60_00081 NZ_KK316846.1 Protein Homology CDS 100810 101589 . + 0 ID=cds-WP_003898413.1;Parent=gene-AL60_RS06090;Dbxref=GenBank:WP_003898413.1;Name=WP_003898413.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214873.1;locus_tag=AL60_RS06090;product=site-2 protease family protein;protein_id=WP_003898413.1;transl_table=11 NZ_KK316846.1 RefSeq gene 101594 102007 . - . ID=gene-AL60_RS06095;Name=AL60_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06095;old_locus_tag=AL60_00082 NZ_KK316846.1 Protein Homology CDS 101594 102007 . - 0 ID=cds-WP_003401852.1;Parent=gene-AL60_RS06095;Dbxref=GenBank:WP_003401852.1;Name=WP_003401852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011726247.1;locus_tag=AL60_RS06095;product=DUF3151 domain-containing protein;protein_id=WP_003401852.1;transl_table=11 NZ_KK316846.1 RefSeq gene 102114 102941 . + . ID=gene-AL60_RS06100;Name=AL60_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06100;old_locus_tag=AL60_00083 NZ_KK316846.1 Protein Homology CDS 102114 102941 . + 0 ID=cds-WP_003401853.1;Parent=gene-AL60_RS06100;Dbxref=GenBank:WP_003401853.1;Name=WP_003401853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214875.1;locus_tag=AL60_RS06100;product=Rv0361 family membrane protein;protein_id=WP_003401853.1;transl_table=11 NZ_KK316846.1 RefSeq gene 103163 104545 . + . ID=gene-AL60_RS06105;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=AL60_RS06105;old_locus_tag=AL60_00084 NZ_KK316846.1 Protein Homology CDS 103163 104545 . + 0 ID=cds-WP_003898415.1;Parent=gene-AL60_RS06105;Dbxref=GenBank:WP_003898415.1;Name=WP_003898415.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214876.1;locus_tag=AL60_RS06105;product=magnesium transporter;protein_id=WP_003898415.1;transl_table=11 NZ_KK316846.1 RefSeq gene 104557 105591 . - . ID=gene-AL60_RS06110;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=AL60_RS06110;old_locus_tag=AL60_00085 NZ_KK316846.1 Protein Homology CDS 104557 105591 . - 0 ID=cds-WP_003401856.1;Parent=gene-AL60_RS06110;Dbxref=GenBank:WP_003401856.1;Name=WP_003401856.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214877.1;locus_tag=AL60_RS06110;product=class II fructose-bisphosphate aldolase;protein_id=WP_003401856.1;transl_table=11 NZ_KK316846.1 RefSeq gene 105687 106370 . + . ID=gene-AL60_RS06115;Name=AL60_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06115;old_locus_tag=AL60_00086 NZ_KK316846.1 Protein Homology CDS 105687 106370 . + 0 ID=cds-WP_003401857.1;Parent=gene-AL60_RS06115;Dbxref=GenBank:WP_003401857.1;Name=WP_003401857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214878.1;locus_tag=AL60_RS06115;product=VTT domain-containing protein;protein_id=WP_003401857.1;transl_table=11 NZ_KK316846.1 RefSeq gene 106359 107489 . - . ID=gene-AL60_RS06120;Name=AL60_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06120;old_locus_tag=AL60_00087 NZ_KK316846.1 Protein Homology CDS 106359 107489 . - 0 ID=cds-WP_003401858.1;Parent=gene-AL60_RS06120;Dbxref=GenBank:WP_003401858.1;Name=WP_003401858.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214879.1;locus_tag=AL60_RS06120;product=glycoside hydrolase family 76 protein;protein_id=WP_003401858.1;transl_table=11 NZ_KK316846.1 RefSeq gene 107514 108107 . - . ID=gene-AL60_RS06125;Name=AL60_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06125;old_locus_tag=AL60_00088 NZ_KK316846.1 Protein Homology CDS 107514 108107 . - 0 ID=cds-WP_003906352.1;Parent=gene-AL60_RS06125;Dbxref=GenBank:WP_003906352.1;Name=WP_003906352.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214880.1;locus_tag=AL60_RS06125;product=ATPase;protein_id=WP_003906352.1;transl_table=11 NZ_KK316846.1 RefSeq gene 108136 108525 . - . ID=gene-AL60_RS06130;Name=AL60_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06130;old_locus_tag=AL60_00089 NZ_KK316846.1 Protein Homology CDS 108136 108525 . - 0 ID=cds-WP_003401860.1;Parent=gene-AL60_RS06130;Dbxref=GenBank:WP_003401860.1;Name=WP_003401860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214881.1;locus_tag=AL60_RS06130;product=TA system antitoxin ParD family protein;protein_id=WP_003401860.1;transl_table=11 NZ_KK316846.1 RefSeq gene 108606 109817 . - . ID=gene-AL60_RS06135;Name=AL60_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06135;old_locus_tag=AL60_00090 NZ_KK316846.1 Protein Homology CDS 108606 109817 . - 0 ID=cds-WP_003906353.1;Parent=gene-AL60_RS06135;Dbxref=GenBank:WP_003906353.1;Name=WP_003906353.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214882.1;locus_tag=AL60_RS06135;product=vWA domain-containing protein;protein_id=WP_003906353.1;transl_table=11 NZ_KK316846.1 RefSeq gene 109823 110425 . - . ID=gene-AL60_RS06140;Name=AL60_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06140;old_locus_tag=AL60_00091 NZ_KK316846.1 Protein Homology CDS 109823 110425 . - 0 ID=cds-WP_003898417.1;Parent=gene-AL60_RS06140;Dbxref=GenBank:WP_003898417.1;Name=WP_003898417.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898417.1;locus_tag=AL60_RS06140;product=SRPBCC family protein;protein_id=WP_003898417.1;transl_table=11 NZ_KK316846.1 RefSeq gene 110439 111335 . - . ID=gene-AL60_RS06145;Name=AL60_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06145;old_locus_tag=AL60_00092 NZ_KK316846.1 Protein Homology CDS 110439 111335 . - 0 ID=cds-WP_003898418.1;Parent=gene-AL60_RS06145;Dbxref=GenBank:WP_003898418.1;Name=WP_003898418.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214884.1;locus_tag=AL60_RS06145;product=AAA family ATPase;protein_id=WP_003898418.1;transl_table=11 NZ_KK316846.1 RefSeq gene 111332 111925 . - . ID=gene-AL60_RS06150;Name=AL60_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06150;old_locus_tag=AL60_00093 NZ_KK316846.1 Protein Homology CDS 111332 111925 . - 0 ID=cds-WP_003401864.1;Parent=gene-AL60_RS06150;Dbxref=GenBank:WP_003401864.1;Name=WP_003401864.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214885.1;locus_tag=AL60_RS06150;product=nucleotidyltransferase family protein;protein_id=WP_003401864.1;transl_table=11 NZ_KK316846.1 RefSeq gene 111922 112677 . - . ID=gene-AL60_RS06155;Name=AL60_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06155;old_locus_tag=AL60_00094 NZ_KK316846.1 Protein Homology CDS 111922 112677 . - 0 ID=cds-WP_003401865.1;Parent=gene-AL60_RS06155;Dbxref=GenBank:WP_003401865.1;Name=WP_003401865.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214886.1;locus_tag=AL60_RS06155;product=XdhC family protein;protein_id=WP_003401865.1;transl_table=11 NZ_KK316846.1 RefSeq gene 112696 115095 . - . ID=gene-AL60_RS06160;Name=AL60_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06160;old_locus_tag=AL60_00095 NZ_KK316846.1 Protein Homology CDS 112696 115095 . - 0 ID=cds-WP_003900133.1;Parent=gene-AL60_RS06160;Dbxref=GenBank:WP_003900133.1;Name=WP_003900133.1;Ontology_term=GO:0005507,GO:0030151,GO:0043885;gbkey=CDS;go_function=copper ion binding|0005507||IEA,molybdenum ion binding|0030151||IEA,anaerobic carbon-monoxide dehydrogenase activity|0043885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214887.1;locus_tag=AL60_RS06160;product=aerobic carbon-monoxide dehydrogenase large subunit;protein_id=WP_003900133.1;transl_table=11 NZ_KK316846.1 RefSeq gene 115092 115571 . - . ID=gene-AL60_RS06165;Name=AL60_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06165;old_locus_tag=AL60_00096 NZ_KK316846.1 Protein Homology CDS 115092 115571 . - 0 ID=cds-WP_003401867.1;Parent=gene-AL60_RS06165;Dbxref=GenBank:WP_003401867.1;Name=WP_003401867.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214888.1;locus_tag=AL60_RS06165;product=(2Fe-2S)-binding protein;protein_id=WP_003401867.1;transl_table=11 NZ_KK316846.1 RefSeq gene 115586 116488 . - . ID=gene-AL60_RS06170;Name=AL60_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06170;old_locus_tag=AL60_00097 NZ_KK316846.1 Protein Homology CDS 115586 116488 . - 0 ID=cds-WP_003898419.1;Parent=gene-AL60_RS06170;Dbxref=GenBank:WP_003898419.1;Name=WP_003898419.1;Ontology_term=GO:0050660,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898419.1;locus_tag=AL60_RS06170;product=FAD binding domain-containing protein;protein_id=WP_003898419.1;transl_table=11 NZ_KK316846.1 RefSeq gene 116522 117688 . - . ID=gene-AL60_RS06175;Name=AL60_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06175;old_locus_tag=AL60_00098 NZ_KK316846.1 Protein Homology CDS 116522 117688 . - 0 ID=cds-WP_023641661.1;Parent=gene-AL60_RS06175;Dbxref=GenBank:WP_023641661.1;Name=WP_023641661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918064.1;locus_tag=AL60_RS06175;product=XdhC family protein;protein_id=WP_023641661.1;transl_table=11 NZ_KK316846.1 RefSeq gene 117713 118678 . + . ID=gene-AL60_RS06180;Name=AL60_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06180;old_locus_tag=AL60_00099 NZ_KK316846.1 Protein Homology CDS 117713 118678 . + 0 ID=cds-WP_003898421.1;Parent=gene-AL60_RS06180;Dbxref=GenBank:WP_003898421.1;Name=WP_003898421.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214891.1;locus_tag=AL60_RS06180;product=LysR family transcriptional regulator;protein_id=WP_003898421.1;transl_table=11 NZ_KK316846.1 RefSeq gene 118929 119150 . + . ID=gene-AL60_RS06185;Name=AL60_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06185;old_locus_tag=AL60_00100 NZ_KK316846.1 GeneMarkS-2+ CDS 118929 119150 . + 0 ID=cds-WP_003401880.1;Parent=gene-AL60_RS06185;Dbxref=GenBank:WP_003401880.1;Name=WP_003401880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS06185;product=hypothetical protein;protein_id=WP_003401880.1;transl_table=11 NZ_KK316846.1 RefSeq gene 119269 119484 . + . ID=gene-AL60_RS06190;Name=secE2;gbkey=Gene;gene=secE2;gene_biotype=protein_coding;locus_tag=AL60_RS06190;old_locus_tag=AL60_00101 NZ_KK316846.1 Protein Homology CDS 119269 119484 . + 0 ID=cds-WP_003401885.1;Parent=gene-AL60_RS06190;Dbxref=GenBank:WP_003401885.1;Name=WP_003401885.1;gbkey=CDS;gene=secE2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177722.1;locus_tag=AL60_RS06190;product=calcium dodecin;protein_id=WP_003401885.1;transl_table=11 NZ_KK316846.1 RefSeq gene 119560 120210 . - . ID=gene-AL60_RS06195;Name=AL60_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06195;old_locus_tag=AL60_00102 NZ_KK316846.1 Protein Homology CDS 119560 120210 . - 0 ID=cds-WP_003900914.1;Parent=gene-AL60_RS06195;Dbxref=GenBank:WP_003900914.1;Name=WP_003900914.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900914.1;locus_tag=AL60_RS06195;product=TrmH family RNA methyltransferase;protein_id=WP_003900914.1;transl_table=11 NZ_KK316846.1 RefSeq gene 120207 121115 . - . ID=gene-AL60_RS06200;Name=AL60_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06200;old_locus_tag=AL60_00103 NZ_KK316846.1 Protein Homology CDS 120207 121115 . - 0 ID=cds-WP_003401890.1;Parent=gene-AL60_RS06200;Dbxref=GenBank:WP_003401890.1;Name=WP_003401890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214895.1;locus_tag=AL60_RS06200;product=hypothetical protein;protein_id=WP_003401890.1;transl_table=11 NZ_KK316846.1 RefSeq gene 121133 121672 . - . ID=gene-AL60_RS06205;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AL60_RS06205;old_locus_tag=AL60_00104 NZ_KK316846.1 Protein Homology CDS 121133 121672 . - 0 ID=cds-WP_003401894.1;Parent=gene-AL60_RS06205;Dbxref=GenBank:WP_003401894.1;Name=WP_003401894.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177723.1;locus_tag=AL60_RS06205;product=orotate phosphoribosyltransferase;protein_id=WP_003401894.1;transl_table=11 NZ_KK316846.1 RefSeq gene 121753 122607 . - . ID=gene-AL60_RS06210;Name=ttfA;gbkey=Gene;gene=ttfA;gene_biotype=protein_coding;locus_tag=AL60_RS06210;old_locus_tag=AL60_00105 NZ_KK316846.1 Protein Homology CDS 121753 122607 . - 0 ID=cds-WP_003401897.1;Parent=gene-AL60_RS06210;Dbxref=GenBank:WP_003401897.1;Name=WP_003401897.1;Ontology_term=GO:0071555;gbkey=CDS;gene=ttfA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214897.1;locus_tag=AL60_RS06210;product=trehalose monomycolate transport factor TtfA;protein_id=WP_003401897.1;transl_table=11 NZ_KK316846.1 RefSeq gene 122748 125294 . - . ID=gene-AL60_RS06215;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AL60_RS06215;old_locus_tag=AL60_00106 NZ_KK316846.1 Protein Homology CDS 122748 125294 . - 0 ID=cds-WP_003401905.1;Parent=gene-AL60_RS06215;Dbxref=GenBank:WP_003401905.1;Name=WP_003401905.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401905.1;locus_tag=AL60_RS06215;product=ATP-dependent chaperone ClpB;protein_id=WP_003401905.1;transl_table=11 NZ_KK316846.1 RefSeq gene 125427 126599 . + . ID=gene-AL60_RS06220;Name=AL60_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06220;old_locus_tag=AL60_00107 NZ_KK316846.1 Protein Homology CDS 125427 126599 . + 0 ID=cds-WP_003401910.1;Parent=gene-AL60_RS06220;Dbxref=GenBank:WP_003401910.1;Name=WP_003401910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214899.1;locus_tag=AL60_RS06220;product=FAD-binding oxidoreductase;protein_id=WP_003401910.1;transl_table=11 NZ_KK316846.1 RefSeq gene 126703 129960 . + . ID=gene-AL60_RS06225;Name=AL60_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06225;old_locus_tag=AL60_00108 NZ_KK316846.1 Protein Homology CDS 126703 129960 . + 0 ID=cds-WP_012054235.1;Parent=gene-AL60_RS06225;Dbxref=GenBank:WP_012054235.1;Name=WP_012054235.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214900.1;locus_tag=AL60_RS06225;product=helix-turn-helix transcriptional regulator;protein_id=WP_012054235.1;transl_table=11 NZ_KK316846.1 RefSeq gene 129964 131295 . - . ID=gene-AL60_RS06230;Name=AL60_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06230;old_locus_tag=AL60_00109 NZ_KK316846.1 Protein Homology CDS 129964 131295 . - 0 ID=cds-WP_003401914.1;Parent=gene-AL60_RS06230;Dbxref=GenBank:WP_003401914.1;Name=WP_003401914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287807.1;locus_tag=AL60_RS06230;product=PPE family protein;protein_id=WP_003401914.1;transl_table=11 NZ_KK316846.1 RefSeq gene 131629 132888 . + . ID=gene-AL60_RS06235;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AL60_RS06235;old_locus_tag=AL60_00110 NZ_KK316846.1 Protein Homology CDS 131629 132888 . + 0 ID=cds-WP_003898427.1;Parent=gene-AL60_RS06235;Dbxref=GenBank:WP_003898427.1;Name=WP_003898427.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524,GO:0016742;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA,hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214903.1;locus_tag=AL60_RS06235;product=phosphoribosylglycinamide formyltransferase 2;protein_id=WP_003898427.1;transl_table=11 NZ_KK316846.1 RefSeq gene 132885 133307 . + . ID=gene-AL60_RS06240;Name=AL60_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06240;old_locus_tag=AL60_00111 NZ_KK316846.1 Protein Homology CDS 132885 133307 . + 0 ID=cds-WP_003401921.1;Parent=gene-AL60_RS06240;Dbxref=GenBank:WP_003401921.1;Name=WP_003401921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214904.1;locus_tag=AL60_RS06240;product=rhodanese-like domain-containing protein;protein_id=WP_003401921.1;transl_table=11 NZ_KK316846.1 RefSeq gene 133304 134524 . + . ID=gene-AL60_RS06245;Name=metZ;gbkey=Gene;gene=metZ;gene_biotype=protein_coding;locus_tag=AL60_RS06245;old_locus_tag=AL60_00112 NZ_KK316846.1 Protein Homology CDS 133304 134524 . + 0 ID=cds-WP_003401927.1;Parent=gene-AL60_RS06245;Dbxref=GenBank:WP_003401927.1;Name=WP_003401927.1;gbkey=CDS;gene=metZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214905.1;locus_tag=AL60_RS06245;product=O-succinylhomoserine sulfhydrylase;protein_id=WP_003401927.1;transl_table=11 NZ_KK316846.1 RefSeq gene 134521 135933 . - . ID=gene-AL60_RS06250;Name=ndhA;gbkey=Gene;gene=ndhA;gene_biotype=protein_coding;locus_tag=AL60_RS06250;old_locus_tag=AL60_00113 NZ_KK316846.1 Protein Homology CDS 134521 135933 . - 0 ID=cds-WP_003898428.1;Parent=gene-AL60_RS06250;Dbxref=GenBank:WP_003898428.1;Name=WP_003898428.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;gene=ndhA;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214906.1;locus_tag=AL60_RS06250;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003898428.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 136208 137400 . + . ID=gene-AL60_RS06255;Name=AL60_RS06255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS06255;old_locus_tag=AL60_00114;pseudo=true NZ_KK316846.1 Protein Homology CDS 136208 137400 . + 0 ID=cds-AL60_RS06255;Parent=gene-AL60_RS06255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014741.6;locus_tag=AL60_RS06255;product=DUF222 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 137416 138135 . - . ID=gene-AL60_RS06260;Name=AL60_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06260;old_locus_tag=AL60_00115 NZ_KK316846.1 Protein Homology CDS 137416 138135 . - 0 ID=cds-WP_003401942.1;Parent=gene-AL60_RS06260;Dbxref=GenBank:WP_003401942.1;Name=WP_003401942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214908.1;locus_tag=AL60_RS06260;product=hyaluronidase/chondrosulfatase;protein_id=WP_003401942.1;transl_table=11 NZ_KK316846.1 RefSeq gene 138234 138638 . + . ID=gene-AL60_RS06265;Name=AL60_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06265;old_locus_tag=AL60_00116 NZ_KK316846.1 Protein Homology CDS 138234 138638 . + 0 ID=cds-WP_003401944.1;Parent=gene-AL60_RS06265;Dbxref=GenBank:WP_003401944.1;Name=WP_003401944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214909.1;locus_tag=AL60_RS06265;product=hypothetical protein;protein_id=WP_003401944.1;transl_table=11 NZ_KK316846.1 RefSeq gene 138644 139036 . + . ID=gene-AL60_RS06270;Name=AL60_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06270;old_locus_tag=AL60_00117 NZ_KK316846.1 Protein Homology CDS 138644 139036 . + 0 ID=cds-WP_003401950.1;Parent=gene-AL60_RS06270;Dbxref=GenBank:WP_003401950.1;Name=WP_003401950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214910.1;locus_tag=AL60_RS06270;product=hypothetical protein;protein_id=WP_003401950.1;transl_table=11 NZ_KK316846.1 RefSeq gene 139110 139478 . + . ID=gene-AL60_RS06275;Name=AL60_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06275;old_locus_tag=AL60_00118 NZ_KK316846.1 Protein Homology CDS 139110 139478 . + 0 ID=cds-WP_003401960.1;Parent=gene-AL60_RS06275;Dbxref=GenBank:WP_003401960.1;Name=WP_003401960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014712350.1;locus_tag=AL60_RS06275;product=hypothetical protein;protein_id=WP_003401960.1;transl_table=11 NZ_KK316846.1 RefSeq gene 139688 139936 . + . ID=gene-AL60_RS06280;Name=AL60_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06280;old_locus_tag=AL60_00119 NZ_KK316846.1 Protein Homology CDS 139688 139936 . + 0 ID=cds-WP_003898430.1;Parent=gene-AL60_RS06280;Dbxref=GenBank:WP_003898430.1;Name=WP_003898430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837048.2;locus_tag=AL60_RS06280;product=hypothetical protein;protein_id=WP_003898430.1;transl_table=11 NZ_KK316846.1 RefSeq gene 139973 140614 . - . ID=gene-AL60_RS06285;Name=AL60_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06285;old_locus_tag=AL60_00120 NZ_KK316846.1 Protein Homology CDS 139973 140614 . - 0 ID=cds-WP_003401963.1;Parent=gene-AL60_RS06285;Dbxref=GenBank:WP_003401963.1;Name=WP_003401963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214912.1;locus_tag=AL60_RS06285;product=hypothetical protein;protein_id=WP_003401963.1;transl_table=11 NZ_KK316846.1 RefSeq gene 140621 141850 . - . ID=gene-AL60_RS06290;Name=lpqK;gbkey=Gene;gene=lpqK;gene_biotype=protein_coding;locus_tag=AL60_RS06290;old_locus_tag=AL60_00121 NZ_KK316846.1 Protein Homology CDS 140621 141850 . - 0 ID=cds-WP_003898432.1;Parent=gene-AL60_RS06290;Dbxref=GenBank:WP_003898432.1;Name=WP_003898432.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lpqK;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214913.1;locus_tag=AL60_RS06290;product=serine hydrolase domain-containing protein;protein_id=WP_003898432.1;transl_table=11 NZ_KK316846.1 RefSeq gene 141860 143047 . - . ID=gene-AL60_RS06295;Name=AL60_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06295;old_locus_tag=AL60_00122 NZ_KK316846.1 Protein Homology CDS 141860 143047 . - 0 ID=cds-WP_003401972.1;Parent=gene-AL60_RS06295;Dbxref=GenBank:WP_003401972.1;Name=WP_003401972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214914.1;locus_tag=AL60_RS06295;product=acyl-CoA dehydrogenase;protein_id=WP_003401972.1;transl_table=11 NZ_KK316846.1 RefSeq gene 143083 143454 . + . ID=gene-AL60_RS06300;Name=AL60_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06300;old_locus_tag=AL60_00123 NZ_KK316846.1 Protein Homology CDS 143083 143454 . + 0 ID=cds-WP_003401978.1;Parent=gene-AL60_RS06300;Dbxref=GenBank:WP_003401978.1;Name=WP_003401978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214915.1;locus_tag=AL60_RS06300;product=DUF3054 domain-containing protein;protein_id=WP_003401978.1;transl_table=11 NZ_KK316846.1 RefSeq gene 143649 146525 . - . ID=gene-AL60_RS06305;Name=mmpL1;gbkey=Gene;gene=mmpL1;gene_biotype=protein_coding;locus_tag=AL60_RS06305;old_locus_tag=AL60_00124 NZ_KK316846.1 Protein Homology CDS 143649 146525 . - 0 ID=cds-WP_003898435.1;Parent=gene-AL60_RS06305;Dbxref=GenBank:WP_003898435.1;Name=WP_003898435.1;gbkey=CDS;gene=mmpL1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214916.1;locus_tag=AL60_RS06305;product=RND transporter MmpL1;protein_id=WP_003898435.1;transl_table=11 NZ_KK316846.1 RefSeq gene 146522 146950 . - . ID=gene-AL60_RS06310;Name=AL60_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06310;old_locus_tag=AL60_00125 NZ_KK316846.1 Protein Homology CDS 146522 146950 . - 0 ID=cds-WP_003402074.1;Parent=gene-AL60_RS06310;Dbxref=GenBank:WP_003402074.1;Name=WP_003402074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214917.1;locus_tag=AL60_RS06310;product=MmpS family transport accessory protein;protein_id=WP_003402074.1;transl_table=11 NZ_KK316846.1 RefSeq gene 147271 149028 . + . ID=gene-AL60_RS06315;Name=fadD30;gbkey=Gene;gene=fadD30;gene_biotype=protein_coding;gene_synonym=faaL30;locus_tag=AL60_RS06315;old_locus_tag=AL60_00126 NZ_KK316846.1 Protein Homology CDS 147271 149028 . + 0 ID=cds-WP_003900139.1;Parent=gene-AL60_RS06315;Dbxref=GenBank:WP_003900139.1;Name=WP_003900139.1;gbkey=CDS;gene=fadD30;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900139.1;locus_tag=AL60_RS06315;product=fatty-acid--AMP ligase FAAL30/FadD30;protein_id=WP_003900139.1;transl_table=11 NZ_KK316846.1 RefSeq gene 149025 153233 . + . ID=gene-AL60_RS06320;Name=AL60_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06320;old_locus_tag=AL60_00127 NZ_KK316846.1 Protein Homology CDS 149025 153233 . + 0 ID=cds-WP_003914588.1;Parent=gene-AL60_RS06320;Dbxref=GenBank:WP_003914588.1;Name=WP_003914588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402080.1;locus_tag=AL60_RS06320;product=type I polyketide synthase;protein_id=WP_003914588.1;transl_table=11 NZ_KK316846.1 RefSeq gene 153181 153939 . - . ID=gene-AL60_RS06325;Name=AL60_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06325;old_locus_tag=AL60_00128 NZ_KK316846.1 Protein Homology CDS 153181 153939 . - 0 ID=cds-WP_003911199.1;Parent=gene-AL60_RS06325;Dbxref=GenBank:WP_003911199.1;Name=WP_003911199.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015289016.1;locus_tag=AL60_RS06325;product=MBL fold metallo-hydrolase;protein_id=WP_003911199.1;transl_table=11 NZ_KK316846.1 RefSeq gene 154077 155087 . + . ID=gene-AL60_RS06330;Name=fgd;gbkey=Gene;gene=fgd;gene_biotype=protein_coding;locus_tag=AL60_RS06330;old_locus_tag=AL60_00129 NZ_KK316846.1 Protein Homology CDS 154077 155087 . + 0 ID=cds-WP_003898438.1;Parent=gene-AL60_RS06330;Dbxref=GenBank:WP_003898438.1;Name=WP_003898438.1;Ontology_term=GO:0006007,GO:0016614,GO:0070967;gbkey=CDS;gene=fgd;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,coenzyme F420 binding|0070967||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214921.1;locus_tag=AL60_RS06330;product=glucose-6-phosphate dehydrogenase (coenzyme-F420);protein_id=WP_003898438.1;transl_table=11 NZ_KK316846.1 RefSeq gene 155080 157152 . + . ID=gene-AL60_RS06335;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AL60_RS06335;old_locus_tag=AL60_00130 NZ_KK316846.1 Protein Homology CDS 155080 157152 . + 0 ID=cds-WP_003898439.1;Parent=gene-AL60_RS06335;Dbxref=GenBank:WP_003898439.1;Name=WP_003898439.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214922.1;locus_tag=AL60_RS06335;product=phosphate acetyltransferase;protein_id=WP_003898439.1;transl_table=11 NZ_KK316846.1 RefSeq gene 157145 158302 . + . ID=gene-AL60_RS06340;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=AL60_RS06340;old_locus_tag=AL60_00131 NZ_KK316846.1 Protein Homology CDS 157145 158302 . + 0 ID=cds-WP_003402097.1;Parent=gene-AL60_RS06340;Dbxref=GenBank:WP_003402097.1;Name=WP_003402097.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;gene=ackA;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214923.1;locus_tag=AL60_RS06340;product=acetate kinase;protein_id=WP_003402097.1;transl_table=11 NZ_KK316846.1 RefSeq gene 158356 160608 . - . ID=gene-AL60_RS06345;Name=pknG;gbkey=Gene;gene=pknG;gene_biotype=protein_coding;locus_tag=AL60_RS06345;old_locus_tag=AL60_00132 NZ_KK316846.1 Protein Homology CDS 158356 160608 . - 0 ID=cds-WP_003402100.1;Parent=gene-AL60_RS06345;Dbxref=GenBank:WP_003402100.1;Name=WP_003402100.1;gbkey=CDS;gene=pknG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214924.1;locus_tag=AL60_RS06345;product=serine/threonine protein kinase PknG;protein_id=WP_003402100.1;transl_table=11 NZ_KK316846.1 RefSeq gene 160608 161594 . - . ID=gene-AL60_RS06350;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=AL60_RS06350;old_locus_tag=AL60_00133 NZ_KK316846.1 Protein Homology CDS 160608 161594 . - 0 ID=cds-WP_003900142.1;Parent=gene-AL60_RS06350;Dbxref=GenBank:WP_003900142.1;Name=WP_003900142.1;gbkey=CDS;gene=glnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214925.1;locus_tag=AL60_RS06350;product=glutamate ABC transporter substrate-binding protein;protein_id=WP_003900142.1;transl_table=11 NZ_KK316846.1 RefSeq gene 161594 162913 . - . ID=gene-AL60_RS06355;Name=glnX;gbkey=Gene;gene=glnX;gene_biotype=protein_coding;locus_tag=AL60_RS06355;old_locus_tag=AL60_00134 NZ_KK316846.1 Protein Homology CDS 161594 162913 . - 0 ID=cds-WP_003402108.1;Parent=gene-AL60_RS06355;Dbxref=GenBank:WP_003402108.1;Name=WP_003402108.1;gbkey=CDS;gene=glnX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214926.1;locus_tag=AL60_RS06355;product=protein kinase G-activating protein GlnX;protein_id=WP_003402108.1;transl_table=11 NZ_KK316846.1 RefSeq gene 163040 163660 . + . ID=gene-AL60_RS06360;Name=AL60_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06360;old_locus_tag=AL60_00135 NZ_KK316846.1 Protein Homology CDS 163040 163660 . + 0 ID=cds-WP_003898441.1;Parent=gene-AL60_RS06360;Dbxref=GenBank:WP_003898441.1;Name=WP_003898441.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898441.1;locus_tag=AL60_RS06360;product=NUDIX hydrolase;protein_id=WP_003898441.1;transl_table=11 NZ_KK316846.1 RefSeq gene 163644 164312 . - . ID=gene-AL60_RS06365;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=AL60_RS06365;old_locus_tag=AL60_00136 NZ_KK316846.1 Protein Homology CDS 163644 164312 . - 0 ID=cds-WP_003402115.1;Parent=gene-AL60_RS06365;Dbxref=GenBank:WP_003402115.1;Name=WP_003402115.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214928.1;locus_tag=AL60_RS06365;product=thiamine phosphate synthase;protein_id=WP_003402115.1;transl_table=11 NZ_KK316846.1 cmsearch riboswitch 164341 164451 . + . ID=id-NZ_KK316846.1:164341..164451;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316846.1 RefSeq gene 164442 165464 . + . ID=gene-AL60_RS06370;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=AL60_RS06370;old_locus_tag=AL60_00137 NZ_KK316846.1 Protein Homology CDS 164442 165464 . + 0 ID=cds-WP_003402118.1;Parent=gene-AL60_RS06370;Dbxref=GenBank:WP_003402118.1;Name=WP_003402118.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214929.1;locus_tag=AL60_RS06370;product=glycine oxidase ThiO;protein_id=WP_003402118.1;transl_table=11 NZ_KK316846.1 RefSeq gene 165461 165667 . + . ID=gene-AL60_RS06375;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=AL60_RS06375;old_locus_tag=AL60_00138 NZ_KK316846.1 Protein Homology CDS 165461 165667 . + 0 ID=cds-WP_003402121.1;Parent=gene-AL60_RS06375;Dbxref=GenBank:WP_003402121.1;Name=WP_003402121.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214930.1;locus_tag=AL60_RS06375;product=sulfur carrier protein ThiS;protein_id=WP_003402121.1;transl_table=11 NZ_KK316846.1 RefSeq gene 165660 166418 . + . ID=gene-AL60_RS06380;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=AL60_RS06380;old_locus_tag=AL60_00139 NZ_KK316846.1 Protein Homology CDS 165660 166418 . + 0 ID=cds-WP_003402126.1;Parent=gene-AL60_RS06380;Dbxref=GenBank:WP_003402126.1;Name=WP_003402126.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214931.1;locus_tag=AL60_RS06380;product=thiazole synthase;protein_id=WP_003402126.1;transl_table=11 NZ_KK316846.1 RefSeq gene 166440 166592 . + . ID=gene-AL60_RS25435;Name=AL60_RS25435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25435 NZ_KK316846.1 Protein Homology CDS 166440 166592 . + 0 ID=cds-WP_003402129.1;Parent=gene-AL60_RS25435;Dbxref=GenBank:WP_003402129.1;Name=WP_003402129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402129.1;locus_tag=AL60_RS25435;product=DUF2752 domain-containing protein;protein_id=WP_003402129.1;transl_table=11 NZ_KK316846.1 RefSeq gene 166790 168292 . + . ID=gene-AL60_RS06385;Name=lpqL;gbkey=Gene;gene=lpqL;gene_biotype=protein_coding;locus_tag=AL60_RS06385;old_locus_tag=AL60_00140 NZ_KK316846.1 Protein Homology CDS 166790 168292 . + 0 ID=cds-WP_031721478.1;Parent=gene-AL60_RS06385;Dbxref=GenBank:WP_031721478.1;Name=WP_031721478.1;gbkey=CDS;gene=lpqL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214932.1;locus_tag=AL60_RS06385;product=M28 family metallopeptidase;protein_id=WP_031721478.1;transl_table=11 NZ_KK316846.1 RefSeq gene 168380 169876 . + . ID=gene-AL60_RS06390;Name=lpqM;gbkey=Gene;gene=lpqM;gene_biotype=protein_coding;locus_tag=AL60_RS06390;old_locus_tag=AL60_00141 NZ_KK316846.1 Protein Homology CDS 168380 169876 . + 0 ID=cds-WP_003898442.1;Parent=gene-AL60_RS06390;Dbxref=GenBank:WP_003898442.1;Name=WP_003898442.1;gbkey=CDS;gene=lpqM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214933.1;locus_tag=AL60_RS06390;product=neutral zinc metallopeptidase;protein_id=WP_003898442.1;transl_table=11 NZ_KK316846.1 RefSeq gene 169855 170196 . - . ID=gene-AL60_RS06395;Name=AL60_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06395;old_locus_tag=AL60_00142 NZ_KK316846.1 Protein Homology CDS 169855 170196 . - 0 ID=cds-WP_003911201.1;Parent=gene-AL60_RS06395;Dbxref=GenBank:WP_003911201.1;Name=WP_003911201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911201.1;locus_tag=AL60_RS06395;product=hypothetical protein;protein_id=WP_003911201.1;transl_table=11 NZ_KK316846.1 RefSeq gene 170426 171055 . - . ID=gene-AL60_RS06400;Name=AL60_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06400;old_locus_tag=AL60_00143 NZ_KK316846.1 Protein Homology CDS 170426 171055 . - 0 ID=cds-WP_003402145.1;Parent=gene-AL60_RS06400;Dbxref=GenBank:WP_003402145.1;Name=WP_003402145.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214935.1;locus_tag=AL60_RS06400;product=alpha/beta hydrolase family protein;protein_id=WP_003402145.1;transl_table=11 NZ_KK316846.1 RefSeq gene 171052 171879 . - . ID=gene-AL60_RS06405;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=AL60_RS06405;old_locus_tag=AL60_00144 NZ_KK316846.1 Protein Homology CDS 171052 171879 . - 0 ID=cds-WP_003898443.1;Parent=gene-AL60_RS06405;Dbxref=GenBank:WP_003898443.1;Name=WP_003898443.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898443.1;locus_tag=AL60_RS06405;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_003898443.1;transl_table=11 NZ_KK316846.1 RefSeq gene 171876 173519 . - . ID=gene-AL60_RS06410;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=AL60_RS06410;old_locus_tag=AL60_00145 NZ_KK316846.1 Protein Homology CDS 171876 173519 . - 0 ID=cds-WP_003900143.1;Parent=gene-AL60_RS06410;Dbxref=GenBank:WP_003900143.1;Name=WP_003900143.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214937.1;locus_tag=AL60_RS06410;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_003900143.1;transl_table=11 NZ_KK316846.1 cmsearch riboswitch 173510 173620 . - . ID=id-NZ_KK316846.1:173510..173620;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316846.1 RefSeq gene 173671 173946 . - . ID=gene-AL60_RS06415;Name=AL60_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06415;old_locus_tag=AL60_00146 NZ_KK316846.1 Protein Homology CDS 173671 173946 . - 0 ID=cds-WP_003402157.1;Parent=gene-AL60_RS06415;Dbxref=GenBank:WP_003402157.1;Name=WP_003402157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214938.1;locus_tag=AL60_RS06415;product=hypothetical protein;protein_id=WP_003402157.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 173845 174087 . + . ID=gene-AL60_RS27850;Name=AL60_RS27850;end_range=174087,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27850;partial=true;pseudo=true NZ_KK316846.1 Protein Homology CDS 173845 174087 . + 0 ID=cds-AL60_RS27850;Parent=gene-AL60_RS27850;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=174087,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040653.1;locus_tag=AL60_RS27850;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 173996 178615 . - . ID=gene-AL60_RS27855;Name=ctpH;gbkey=Gene;gene=ctpH;gene_biotype=protein_coding;locus_tag=AL60_RS27855;old_locus_tag=AL60_00147 NZ_KK316846.1 Protein Homology CDS 173996 178615 . - 0 ID=cds-WP_012054236.1;Parent=gene-AL60_RS27855;Dbxref=GenBank:WP_012054236.1;Name=WP_012054236.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;gene=ctpH;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214939.1;locus_tag=AL60_RS27855;product=cation-translocating P-type ATPase;protein_id=WP_012054236.1;transl_table=11 NZ_KK316846.1 RefSeq gene 178667 179110 . - . ID=gene-AL60_RS06425;Name=AL60_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06425;old_locus_tag=AL60_00148 NZ_KK316846.1 Protein Homology CDS 178667 179110 . - 0 ID=cds-WP_003402171.1;Parent=gene-AL60_RS06425;Dbxref=GenBank:WP_003402171.1;Name=WP_003402171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214940.1;locus_tag=AL60_RS06425;product=hypothetical protein;protein_id=WP_003402171.1;transl_table=11 NZ_KK316846.1 RefSeq gene 179311 180117 . - . ID=gene-AL60_RS06430;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=AL60_RS06430;old_locus_tag=AL60_00149 NZ_KK316846.1 Protein Homology CDS 179311 180117 . - 0 ID=cds-WP_031351974.1;Parent=gene-AL60_RS06430;Dbxref=GenBank:WP_031351974.1;Name=WP_031351974.1;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;gene=xthA;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004571494.1;locus_tag=AL60_RS06430;product=exodeoxyribonuclease III;protein_id=WP_031351974.1;transl_table=11 NZ_KK316846.1 RefSeq gene 180189 181097 . - . ID=gene-AL60_RS06435;Name=AL60_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06435;old_locus_tag=AL60_00150 NZ_KK316846.1 Protein Homology CDS 180189 181097 . - 0 ID=cds-WP_003900144.1;Parent=gene-AL60_RS06435;Dbxref=GenBank:WP_003900144.1;Name=WP_003900144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214942.1;locus_tag=AL60_RS06435;product=N-acetylglutamate synthase%2C CG3035 family;protein_id=WP_003900144.1;transl_table=11 NZ_KK316846.1 RefSeq gene 181097 181690 . - . ID=gene-AL60_RS06440;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AL60_RS06440;old_locus_tag=AL60_00151 NZ_KK316846.1 Protein Homology CDS 181097 181690 . - 0 ID=cds-WP_003402185.1;Parent=gene-AL60_RS06440;Dbxref=GenBank:WP_003402185.1;Name=WP_003402185.1;Ontology_term=GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214943.1;locus_tag=AL60_RS06440;product=peptide deformylase;protein_id=WP_003402185.1;transl_table=11 NZ_KK316846.1 RefSeq gene 182027 182335 . + . ID=gene-AL60_RS06445;Name=AL60_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06445;old_locus_tag=AL60_00152 NZ_KK316846.1 Protein Homology CDS 182027 182335 . + 0 ID=cds-WP_003402188.1;Parent=gene-AL60_RS06445;Dbxref=GenBank:WP_003402188.1;Name=WP_003402188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214944.1;locus_tag=AL60_RS06445;product=DUF3263 domain-containing protein;protein_id=WP_003402188.1;transl_table=11 NZ_KK316846.1 RefSeq gene 182388 182861 . + . ID=gene-AL60_RS06450;Name=AL60_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06450;old_locus_tag=AL60_00153 NZ_KK316846.1 Protein Homology CDS 182388 182861 . + 0 ID=cds-WP_009938812.1;Parent=gene-AL60_RS06450;Dbxref=GenBank:WP_009938812.1;Name=WP_009938812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873789.1;locus_tag=AL60_RS06450;product=vesiculogenesis/immune response regulator VirR;protein_id=WP_009938812.1;transl_table=11 NZ_KK316846.1 RefSeq gene 182894 183616 . + . ID=gene-AL60_RS06455;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AL60_RS06455;old_locus_tag=AL60_00154 NZ_KK316846.1 Protein Homology CDS 182894 183616 . + 0 ID=cds-WP_003402198.1;Parent=gene-AL60_RS06455;Dbxref=GenBank:WP_003402198.1;Name=WP_003402198.1;Ontology_term=GO:0004784,GO:0005507;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA,copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214946.1;locus_tag=AL60_RS06455;product=superoxide dismutase[Cu-Zn];protein_id=WP_003402198.1;transl_table=11 NZ_KK316846.1 RefSeq gene 183618 184748 . + . ID=gene-AL60_RS06460;Name=AL60_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06460;old_locus_tag=AL60_00155 NZ_KK316846.1 Protein Homology CDS 183618 184748 . + 0 ID=cds-WP_003900145.1;Parent=gene-AL60_RS06460;Dbxref=GenBank:WP_003900145.1;Name=WP_003900145.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214947.1;locus_tag=AL60_RS06460;product=glutamate--cysteine ligase;protein_id=WP_003900145.1;transl_table=11 NZ_KK316846.1 RefSeq gene 184808 185461 . + . ID=gene-AL60_RS06465;Name=AL60_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06465;old_locus_tag=AL60_00156 NZ_KK316846.1 Protein Homology CDS 184808 185461 . + 0 ID=cds-WP_003900146.1;Parent=gene-AL60_RS06465;Dbxref=GenBank:WP_003900146.1;Name=WP_003900146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214948.1;locus_tag=AL60_RS06465;product=LON peptidase substrate-binding domain-containing protein;protein_id=WP_003900146.1;transl_table=11 NZ_KK316846.1 RefSeq gene 185641 187827 . - . ID=gene-AL60_RS06470;Name=AL60_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06470;old_locus_tag=AL60_00157 NZ_KK316846.1 Protein Homology CDS 185641 187827 . - 0 ID=cds-WP_003402206.1;Parent=gene-AL60_RS06470;Dbxref=GenBank:WP_003402206.1;Name=WP_003402206.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214949.1;locus_tag=AL60_RS06470;product=AAA family ATPase;protein_id=WP_003402206.1;transl_table=11 NZ_KK316846.1 RefSeq gene 187824 188684 . - . ID=gene-AL60_RS06475;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AL60_RS06475;old_locus_tag=AL60_00158 NZ_KK316846.1 Protein Homology CDS 187824 188684 . - 0 ID=cds-WP_003906370.1;Parent=gene-AL60_RS06475;Dbxref=GenBank:WP_003906370.1;Name=WP_003906370.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214950.1;locus_tag=AL60_RS06475;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_003906370.1;transl_table=11 NZ_KK316846.1 RefSeq gene 188681 189376 . - . ID=gene-AL60_RS06480;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=AL60_RS06480;old_locus_tag=AL60_00159 NZ_KK316846.1 Protein Homology CDS 188681 189376 . - 0 ID=cds-WP_003402216.1;Parent=gene-AL60_RS06480;Dbxref=GenBank:WP_003402216.1;Name=WP_003402216.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=psd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214951.1;locus_tag=AL60_RS06480;product=phosphatidylserine decarboxylase;protein_id=WP_003402216.1;transl_table=11 NZ_KK316846.1 RefSeq gene 189437 190654 . - . ID=gene-AL60_RS06485;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=AL60_RS06485;old_locus_tag=AL60_00160 NZ_KK316846.1 Protein Homology CDS 189437 190654 . - 0 ID=cds-WP_003898451.1;Parent=gene-AL60_RS06485;Dbxref=GenBank:WP_003898451.1;Name=WP_003898451.1;Ontology_term=GO:0032324,GO:0061599;gbkey=CDS;gene=moeA;go_function=molybdopterin molybdotransferase activity|0061599||IEA;go_process=molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177725.1;locus_tag=AL60_RS06485;product=molybdopterin molybdotransferase MoeA;protein_id=WP_003898451.1;transl_table=11 NZ_KK316846.1 RefSeq gene 190673 191608 . - . ID=gene-AL60_RS06490;Name=AL60_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06490;old_locus_tag=AL60_00161 NZ_KK316846.1 Protein Homology CDS 190673 191608 . - 0 ID=cds-WP_003402219.1;Parent=gene-AL60_RS06490;Dbxref=GenBank:WP_003402219.1;Name=WP_003402219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214953.1;locus_tag=AL60_RS06490;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003402219.1;transl_table=11 NZ_KK316846.1 RefSeq gene 191902 193524 . + . ID=gene-AL60_RS06495;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AL60_RS06495;old_locus_tag=AL60_00162 NZ_KK316846.1 Protein Homology CDS 191902 193524 . + 0 ID=cds-WP_003402236.1;Parent=gene-AL60_RS06495;Dbxref=GenBank:WP_003402236.1;Name=WP_003402236.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214954.1;locus_tag=AL60_RS06495;product=chaperonin GroEL;protein_id=WP_003402236.1;transl_table=11 NZ_KK316846.1 RefSeq gene 193590 194018 . - . ID=gene-AL60_RS06500;Name=AL60_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06500;old_locus_tag=AL60_00163 NZ_KK316846.1 Protein Homology CDS 193590 194018 . - 0 ID=cds-WP_003402238.1;Parent=gene-AL60_RS06500;Dbxref=GenBank:WP_003402238.1;Name=WP_003402238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214955.1;locus_tag=AL60_RS06500;product=hypothetical protein;protein_id=WP_003402238.1;transl_table=11 NZ_KK316846.1 RefSeq gene 194045 195508 . - . ID=gene-AL60_RS06505;Name=AL60_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06505;old_locus_tag=AL60_00164 NZ_KK316846.1 Protein Homology CDS 194045 195508 . - 0 ID=cds-WP_003402239.1;Parent=gene-AL60_RS06505;Dbxref=GenBank:WP_003402239.1;Name=WP_003402239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177726.2;locus_tag=AL60_RS06505;product=PPE family protein;protein_id=WP_003402239.1;transl_table=11 NZ_KK316846.1 RefSeq gene 195690 196205 . + . ID=gene-AL60_RS06510;Name=AL60_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06510;old_locus_tag=AL60_00165 NZ_KK316846.1 Protein Homology CDS 195690 196205 . + 0 ID=cds-WP_003402240.1;Parent=gene-AL60_RS06510;Dbxref=GenBank:WP_003402240.1;Name=WP_003402240.1;Ontology_term=GO:0010127,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=mycothiol-dependent detoxification|0010127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214957.1;locus_tag=AL60_RS06510;product=mycothiol transferase;protein_id=WP_003402240.1;transl_table=11 NZ_KK316846.1 RefSeq gene 196385 197083 . - . ID=gene-AL60_RS06515;Name=rskA;gbkey=Gene;gene=rskA;gene_biotype=protein_coding;locus_tag=AL60_RS06515;old_locus_tag=AL60_00166 NZ_KK316846.1 Protein Homology CDS 196385 197083 . - 0 ID=cds-WP_003898455.1;Parent=gene-AL60_RS06515;Dbxref=GenBank:WP_003898455.1;Name=WP_003898455.1;gbkey=CDS;gene=rskA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214958.1;locus_tag=AL60_RS06515;product=anti-sigma-K factor RskA;protein_id=WP_003898455.1;transl_table=11 NZ_KK316846.1 RefSeq gene 197127 197690 . - . ID=gene-AL60_RS06520;Name=sigK;gbkey=Gene;gene=sigK;gene_biotype=protein_coding;locus_tag=AL60_RS06520;old_locus_tag=AL60_00167 NZ_KK316846.1 Protein Homology CDS 197127 197690 . - 0 ID=cds-WP_003402246.1;Parent=gene-AL60_RS06520;Dbxref=GenBank:WP_003402246.1;Name=WP_003402246.1;gbkey=CDS;gene=sigK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214959.1;locus_tag=AL60_RS06520;product=sigma-70 family RNA polymerase sigma factor SigK;protein_id=WP_003402246.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 197739 198509 . - . ID=gene-AL60_RS0104090;Name=AL60_RS0104090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0104090;old_locus_tag=AL60_00168;pseudo=true NZ_KK316846.1 Protein Homology CDS 197739 198509 . - 0 ID=cds-AL60_RS0104090;Parent=gene-AL60_RS0104090;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214960.1;locus_tag=AL60_RS0104090;product=DUF1295 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 198518 199801 . - . ID=gene-AL60_RS06525;Name=AL60_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06525;old_locus_tag=AL60_00169 NZ_KK316846.1 Protein Homology CDS 198518 199801 . - 0 ID=cds-WP_003402250.1;Parent=gene-AL60_RS06525;Dbxref=GenBank:WP_003402250.1;Name=WP_003402250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214961.1;locus_tag=AL60_RS06525;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_003402250.1;transl_table=11 NZ_KK316846.1 RefSeq gene 199798 200529 . - . ID=gene-AL60_RS06530;Name=AL60_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06530;old_locus_tag=AL60_00170 NZ_KK316846.1 Protein Homology CDS 199798 200529 . - 0 ID=cds-WP_003900930.1;Parent=gene-AL60_RS06530;Dbxref=GenBank:WP_003900930.1;Name=WP_003900930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900930.1;locus_tag=AL60_RS06530;product=DUF1365 domain-containing protein;protein_id=WP_003900930.1;transl_table=11 NZ_KK316846.1 RefSeq gene 200523 201842 . - . ID=gene-AL60_RS06535;Name=AL60_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06535;old_locus_tag=AL60_00171 NZ_KK316846.1 Protein Homology CDS 200523 201842 . - 0 ID=cds-WP_003402268.1;Parent=gene-AL60_RS06535;Dbxref=GenBank:WP_003402268.1;Name=WP_003402268.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214963.1;locus_tag=AL60_RS06535;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003402268.1;transl_table=11 NZ_KK316846.1 RefSeq gene 201882 204785 . - . ID=gene-AL60_RS06540;Name=mmpL4;gbkey=Gene;gene=mmpL4;gene_biotype=protein_coding;locus_tag=AL60_RS06540;old_locus_tag=AL60_00172 NZ_KK316846.1 Protein Homology CDS 201882 204785 . - 0 ID=cds-WP_003898458.1;Parent=gene-AL60_RS06540;Dbxref=GenBank:WP_003898458.1;Name=WP_003898458.1;gbkey=CDS;gene=mmpL4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898458.1;locus_tag=AL60_RS06540;product=siderophore RND transporter MmpL4;protein_id=WP_003898458.1;transl_table=11 NZ_KK316846.1 RefSeq gene 204782 205204 . - . ID=gene-AL60_RS06545;Name=mmpS4;gbkey=Gene;gene=mmpS4;gene_biotype=protein_coding;locus_tag=AL60_RS06545;old_locus_tag=AL60_00173 NZ_KK316846.1 Protein Homology CDS 204782 205204 . - 0 ID=cds-WP_003402272.1;Parent=gene-AL60_RS06545;Dbxref=GenBank:WP_003402272.1;Name=WP_003402272.1;gbkey=CDS;gene=mmpS4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214965.1;locus_tag=AL60_RS06545;product=siderophore RND transporter accessory protein MmpS4;protein_id=WP_003402272.1;transl_table=11 NZ_KK316846.1 RefSeq gene 205436 206146 . + . ID=gene-AL60_RS06550;Name=AL60_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06550;old_locus_tag=AL60_00174 NZ_KK316846.1 Protein Homology CDS 205436 206146 . + 0 ID=cds-WP_003402282.1;Parent=gene-AL60_RS06550;Dbxref=GenBank:WP_003402282.1;Name=WP_003402282.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214966.1;locus_tag=AL60_RS06550;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003402282.1;transl_table=11 NZ_KK316846.1 RefSeq gene 206468 208024 . + . ID=gene-AL60_RS06555;Name=AL60_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06555;old_locus_tag=AL60_00175 NZ_KK316846.1 Protein Homology CDS 206468 208024 . + 0 ID=cds-WP_012054239.1;Parent=gene-AL60_RS06555;Dbxref=GenBank:WP_012054239.1;Name=WP_012054239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177727.1;locus_tag=AL60_RS06555;product=PPE family protein;protein_id=WP_012054239.1;transl_table=11 NZ_KK316846.1 RefSeq gene 208030 208353 . - . ID=gene-AL60_RS27020;Name=AL60_RS27020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27020 NZ_KK316846.1 Protein Homology CDS 208030 208353 . - 0 ID=cds-WP_003898461.1;Parent=gene-AL60_RS27020;Dbxref=GenBank:WP_003898461.1;Name=WP_003898461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898461.1;locus_tag=AL60_RS27020;product=hypothetical protein;protein_id=WP_003898461.1;transl_table=11 NZ_KK316846.1 RefSeq gene 208669 209115 . - . ID=gene-AL60_RS06560;Name=AL60_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06560;old_locus_tag=AL60_00177 NZ_KK316846.1 Protein Homology CDS 208669 209115 . - 0 ID=cds-WP_003402286.1;Parent=gene-AL60_RS06560;Dbxref=GenBank:WP_003402286.1;Name=WP_003402286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214969.1;locus_tag=AL60_RS06560;product=DUF5078 domain-containing protein;protein_id=WP_003402286.1;transl_table=11 NZ_KK316846.1 RefSeq gene 209183 210097 . - . ID=gene-AL60_RS06565;Name=AL60_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06565;old_locus_tag=AL60_00178 NZ_KK316846.1 Protein Homology CDS 209183 210097 . - 0 ID=cds-WP_003898463.1;Parent=gene-AL60_RS06565;Dbxref=GenBank:WP_003898463.1;Name=WP_003898463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214970.1;locus_tag=AL60_RS06565;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003898463.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 210329 210651 . - . ID=gene-AL60_RS06570;Name=AL60_RS06570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS06570;old_locus_tag=AL60_00179;pseudo=true NZ_KK316846.1 Protein Homology CDS 210329 210651 . - 0 ID=cds-AL60_RS06570;Parent=gene-AL60_RS06570;Note=frameshifted;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013831006.1;locus_tag=AL60_RS06570;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 210638 210811 . - . ID=gene-AL60_RS06575;Name=AL60_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06575;old_locus_tag=AL60_00180 NZ_KK316846.1 Protein Homology CDS 210638 210811 . - 0 ID=cds-WP_003903009.1;Parent=gene-AL60_RS06575;Dbxref=GenBank:WP_003903009.1;Name=WP_003903009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409102.1;locus_tag=AL60_RS06575;product=antitoxin MazE;protein_id=WP_003903009.1;transl_table=11 NZ_KK316846.1 RefSeq gene 210880 212901 . - . ID=gene-AL60_RS06580;Name=AL60_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06580;old_locus_tag=AL60_00181 NZ_KK316846.1 Protein Homology CDS 210880 212901 . - 0 ID=cds-WP_003402292.1;Parent=gene-AL60_RS06580;Dbxref=GenBank:WP_003402292.1;Name=WP_003402292.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214971.1;locus_tag=AL60_RS06580;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_003402292.1;transl_table=11 NZ_KK316846.1 RefSeq gene 212969 214492 . + . ID=gene-AL60_RS06585;Name=exaC;gbkey=Gene;gene=exaC;gene_biotype=protein_coding;locus_tag=AL60_RS06585;old_locus_tag=AL60_00182 NZ_KK316846.1 Protein Homology CDS 212969 214492 . + 0 ID=cds-WP_003402294.1;Parent=gene-AL60_RS06585;Dbxref=GenBank:WP_003402294.1;Name=WP_003402294.1;Ontology_term=GO:0006068,GO:0004029;gbkey=CDS;gene=exaC;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA;go_process=ethanol catabolic process|0006068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214972.1;locus_tag=AL60_RS06585;product=acetaldehyde dehydrogenase ExaC;protein_id=WP_003402294.1;transl_table=11 NZ_KK316846.1 RefSeq gene 214492 214983 . + . ID=gene-AL60_RS06590;Name=AL60_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06590;old_locus_tag=AL60_00183 NZ_KK316846.1 Protein Homology CDS 214492 214983 . + 0 ID=cds-WP_003898464.1;Parent=gene-AL60_RS06590;Dbxref=GenBank:WP_003898464.1;Name=WP_003898464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214973.1;locus_tag=AL60_RS06590;product=DUF779 domain-containing protein;protein_id=WP_003898464.1;transl_table=11 NZ_KK316846.1 RefSeq gene 215004 215282 . + . ID=gene-AL60_RS06595;Name=AL60_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06595;old_locus_tag=AL60_00184 NZ_KK316846.1 Protein Homology CDS 215004 215282 . + 0 ID=cds-WP_003898465.1;Parent=gene-AL60_RS06595;Dbxref=GenBank:WP_003898465.1;Name=WP_003898465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015626659.1;locus_tag=AL60_RS06595;product=putative holin;protein_id=WP_003898465.1;transl_table=11 NZ_KK316846.1 RefSeq gene 215275 215844 . + . ID=gene-AL60_RS06600;Name=AL60_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06600;old_locus_tag=AL60_00185 NZ_KK316846.1 Protein Homology CDS 215275 215844 . + 0 ID=cds-WP_003898466.1;Parent=gene-AL60_RS06600;Dbxref=GenBank:WP_003898466.1;Name=WP_003898466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898466.1;locus_tag=AL60_RS06600;product=hypothetical protein;protein_id=WP_003898466.1;transl_table=11 NZ_KK316846.1 RefSeq gene 215908 217302 . + . ID=gene-AL60_RS06605;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AL60_RS06605;old_locus_tag=AL60_00186 NZ_KK316846.1 Protein Homology CDS 215908 217302 . + 0 ID=cds-WP_003402301.1;Parent=gene-AL60_RS06605;Dbxref=GenBank:WP_003402301.1;Name=WP_003402301.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214976.1;locus_tag=AL60_RS06605;product=dihydrolipoyl dehydrogenase;protein_id=WP_003402301.1;transl_table=11 NZ_KK316846.1 RefSeq gene 217310 217603 . + . ID=gene-AL60_RS06610;Name=AL60_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06610;old_locus_tag=AL60_00187 NZ_KK316846.1 Protein Homology CDS 217310 217603 . + 0 ID=cds-WP_003402304.1;Parent=gene-AL60_RS06610;Dbxref=GenBank:WP_003402304.1;Name=WP_003402304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214977.1;locus_tag=AL60_RS06610;product=hypothetical protein;protein_id=WP_003402304.1;transl_table=11 NZ_KK316846.1 RefSeq gene 217607 218179 . - . ID=gene-AL60_RS06615;Name=AL60_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06615;old_locus_tag=AL60_00188 NZ_KK316846.1 Protein Homology CDS 217607 218179 . - 0 ID=cds-WP_003402306.1;Parent=gene-AL60_RS06615;Dbxref=GenBank:WP_003402306.1;Name=WP_003402306.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214978.1;locus_tag=AL60_RS06615;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003402306.1;transl_table=11 NZ_KK316846.1 RefSeq gene 218176 219600 . - . ID=gene-AL60_RS06620;Name=ramB;gbkey=Gene;gene=ramB;gene_biotype=protein_coding;locus_tag=AL60_RS06620;old_locus_tag=AL60_00189 NZ_KK316846.1 Protein Homology CDS 218176 219600 . - 0 ID=cds-WP_003898467.1;Parent=gene-AL60_RS06620;Dbxref=GenBank:WP_003898467.1;Name=WP_003898467.1;gbkey=CDS;gene=ramB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214979.1;locus_tag=AL60_RS06620;product=acetate metabolism transcriptional regulator RamB;protein_id=WP_003898467.1;transl_table=11 NZ_KK316846.1 RefSeq gene 219752 220546 . + . ID=gene-AL60_RS06625;Name=AL60_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06625;old_locus_tag=AL60_00190 NZ_KK316846.1 Protein Homology CDS 219752 220546 . + 0 ID=cds-WP_003402311.1;Parent=gene-AL60_RS06625;Dbxref=GenBank:WP_003402311.1;Name=WP_003402311.1;Ontology_term=GO:0006633,GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214980.1;locus_tag=AL60_RS06625;product=acyl-[acyl-carrier-protein] thioesterase;protein_id=WP_003402311.1;transl_table=11 NZ_KK316846.1 RefSeq gene 220821 222107 . + . ID=gene-AL60_RS06630;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AL60_RS06630;old_locus_tag=AL60_00191 NZ_KK316846.1 Protein Homology CDS 220821 222107 . + 0 ID=cds-WP_003402316.1;Parent=gene-AL60_RS06630;Dbxref=GenBank:WP_003402316.1;Name=WP_003402316.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177728.1;locus_tag=AL60_RS06630;product=isocitrate lyase;protein_id=WP_003402316.1;transl_table=11 NZ_KK316846.1 RefSeq gene 222189 223049 . + . ID=gene-AL60_RS06635;Name=fadB2;gbkey=Gene;gene=fadB2;gene_biotype=protein_coding;locus_tag=AL60_RS06635;old_locus_tag=AL60_00192 NZ_KK316846.1 Protein Homology CDS 222189 223049 . + 0 ID=cds-WP_003402318.1;Parent=gene-AL60_RS06635;Dbxref=GenBank:WP_003402318.1;Name=WP_003402318.1;gbkey=CDS;gene=fadB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214982.1;locus_tag=AL60_RS06635;product=3-hydroxybutyryl-CoA dehydrogenase FadB2;protein_id=WP_003402318.1;transl_table=11 NZ_KK316846.1 RefSeq gene 223182 224042 . + . ID=gene-AL60_RS06640;Name=umaA;gbkey=Gene;gene=umaA;gene_biotype=protein_coding;locus_tag=AL60_RS06640;old_locus_tag=AL60_00193 NZ_KK316846.1 Protein Homology CDS 223182 224042 . + 0 ID=cds-WP_003900153.1;Parent=gene-AL60_RS06640;Dbxref=GenBank:WP_003900153.1;Name=WP_003900153.1;gbkey=CDS;gene=umaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177729.1;locus_tag=AL60_RS06640;product=SAM-dependent methyltransferase UmaA;protein_id=WP_003900153.1;transl_table=11 NZ_KK316846.1 RefSeq gene 224142 225005 . - . ID=gene-AL60_RS06645;Name=pcaA;gbkey=Gene;gene=pcaA;gene_biotype=protein_coding;locus_tag=AL60_RS06645;old_locus_tag=AL60_00194 NZ_KK316846.1 Protein Homology CDS 224142 225005 . - 0 ID=cds-WP_003402323.1;Parent=gene-AL60_RS06645;Dbxref=GenBank:WP_003402323.1;Name=WP_003402323.1;gbkey=CDS;gene=pcaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177730.1;locus_tag=AL60_RS06645;product=cyclopropane mycolic acid synthase PcaA;protein_id=WP_003402323.1;transl_table=11 NZ_KK316846.1 RefSeq gene 225148 225588 . - . ID=gene-AL60_RS06650;Name=AL60_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06650;old_locus_tag=AL60_00195 NZ_KK316846.1 Protein Homology CDS 225148 225588 . - 0 ID=cds-WP_003898470.1;Parent=gene-AL60_RS06650;Dbxref=GenBank:WP_003898470.1;Name=WP_003898470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177622.1;locus_tag=AL60_RS06650;product=UbiA prenyltransferase family protein;protein_id=WP_003898470.1;transl_table=11 NZ_KK316846.1 RefSeq gene 225519 226007 . - . ID=gene-AL60_RS06655;Name=AL60_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06655;old_locus_tag=AL60_00196 NZ_KK316846.1 Protein Homology CDS 225519 226007 . - 0 ID=cds-WP_003402327.1;Parent=gene-AL60_RS06655;Dbxref=GenBank:WP_003402327.1;Name=WP_003402327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214985.1;locus_tag=AL60_RS06655;product=UbiA prenyltransferase family protein;protein_id=WP_003402327.1;transl_table=11 NZ_KK316846.1 RefSeq gene 226017 226721 . - . ID=gene-AL60_RS06660;Name=AL60_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06660;old_locus_tag=AL60_00197 NZ_KK316846.1 Protein Homology CDS 226017 226721 . - 0 ID=cds-WP_003906375.1;Parent=gene-AL60_RS06660;Dbxref=GenBank:WP_003906375.1;Name=WP_003906375.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214986.1;locus_tag=AL60_RS06660;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003906375.1;transl_table=11 NZ_KK316846.1 RefSeq gene 226858 228228 . + . ID=gene-AL60_RS06665;Name=AL60_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06665;old_locus_tag=AL60_00198 NZ_KK316846.1 Protein Homology CDS 226858 228228 . + 0 ID=cds-WP_003402332.1;Parent=gene-AL60_RS06665;Dbxref=GenBank:WP_003402332.1;Name=WP_003402332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214987.2;locus_tag=AL60_RS06665;product=DUF445 domain-containing protein;protein_id=WP_003402332.1;transl_table=11 NZ_KK316846.1 RefSeq gene 228315 228737 . + . ID=gene-AL60_RS06670;Name=AL60_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06670;old_locus_tag=AL60_00199 NZ_KK316846.1 Protein Homology CDS 228315 228737 . + 0 ID=cds-WP_003402335.1;Parent=gene-AL60_RS06670;Dbxref=GenBank:WP_003402335.1;Name=WP_003402335.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214988.1;locus_tag=AL60_RS06670;product=helix-turn-helix domain-containing protein;protein_id=WP_003402335.1;transl_table=11 NZ_KK316846.1 RefSeq gene 229091 229690 . + . ID=gene-AL60_RS06675;Name=hbhA;gbkey=Gene;gene=hbhA;gene_biotype=protein_coding;locus_tag=AL60_RS06675;old_locus_tag=AL60_00200 NZ_KK316846.1 Protein Homology CDS 229091 229690 . + 0 ID=cds-WP_003402339.1;Parent=gene-AL60_RS06675;Dbxref=GenBank:WP_003402339.1;Name=WP_003402339.1;gbkey=CDS;gene=hbhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214989.1;locus_tag=AL60_RS06675;product=heparin-binding hemagglutinin HbhA;protein_id=WP_003402339.1;transl_table=11 NZ_KK316846.1 RefSeq gene 229778 230065 . + . ID=gene-AL60_RS06680;Name=AL60_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06680;old_locus_tag=AL60_00201 NZ_KK316846.1 Protein Homology CDS 229778 230065 . + 0 ID=cds-WP_003898474.1;Parent=gene-AL60_RS06680;Dbxref=GenBank:WP_003898474.1;Name=WP_003898474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898474.1;locus_tag=AL60_RS06680;product=DUF2516 family protein;protein_id=WP_003898474.1;transl_table=11 NZ_KK316846.1 RefSeq gene 230070 230516 . + . ID=gene-AL60_RS06685;Name=AL60_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06685;old_locus_tag=AL60_00202 NZ_KK316846.1 Protein Homology CDS 230070 230516 . + 0 ID=cds-WP_003402344.1;Parent=gene-AL60_RS06685;Dbxref=GenBank:WP_003402344.1;Name=WP_003402344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214991.1;locus_tag=AL60_RS06685;product=DUF2599 domain-containing protein;protein_id=WP_003402344.1;transl_table=11 NZ_KK316846.1 RefSeq gene 230516 231190 . + . ID=gene-AL60_RS06690;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AL60_RS06690;old_locus_tag=AL60_00203 NZ_KK316846.1 Protein Homology CDS 230516 231190 . + 0 ID=cds-WP_003402347.1;Parent=gene-AL60_RS06690;Dbxref=GenBank:WP_003402347.1;Name=WP_003402347.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214992.1;locus_tag=AL60_RS06690;product=deoxyribose-phosphate aldolase;protein_id=WP_003402347.1;transl_table=11 NZ_KK316846.1 RefSeq gene 231215 232261 . - . ID=gene-AL60_RS06695;Name=AL60_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06695;old_locus_tag=AL60_00204 NZ_KK316846.1 Protein Homology CDS 231215 232261 . - 0 ID=cds-WP_003898475.1;Parent=gene-AL60_RS06695;Dbxref=GenBank:WP_003898475.1;Name=WP_003898475.1;Ontology_term=GO:0005543;gbkey=CDS;go_function=phospholipid binding|0005543||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214993.1;locus_tag=AL60_RS06695;product=LmeA family phospholipid-binding protein;protein_id=WP_003898475.1;transl_table=11 NZ_KK316846.1 RefSeq gene 232258 233100 . - . ID=gene-AL60_RS06700;Name=AL60_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06700;old_locus_tag=AL60_00205 NZ_KK316846.1 Protein Homology CDS 232258 233100 . - 0 ID=cds-WP_003402350.1;Parent=gene-AL60_RS06700;Dbxref=GenBank:WP_003402350.1;Name=WP_003402350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214994.2;locus_tag=AL60_RS06700;product=carbon-nitrogen hydrolase family protein;protein_id=WP_003402350.1;transl_table=11 NZ_KK316846.1 RefSeq gene 233282 233806 . - . ID=gene-AL60_RS06705;Name=AL60_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06705;old_locus_tag=AL60_00206 NZ_KK316846.1 Protein Homology CDS 233282 233806 . - 0 ID=cds-WP_003402351.1;Parent=gene-AL60_RS06705;Dbxref=GenBank:WP_003402351.1;Name=WP_003402351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214995.1;locus_tag=AL60_RS06705;product=DUF2505 domain-containing protein;protein_id=WP_003402351.1;transl_table=11 NZ_KK316846.1 RefSeq gene 233833 234942 . + . ID=gene-AL60_RS06710;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AL60_RS06710;old_locus_tag=AL60_00207 NZ_KK316846.1 Protein Homology CDS 233833 234942 . + 0 ID=cds-WP_003402354.1;Parent=gene-AL60_RS06710;Dbxref=GenBank:WP_003402354.1;Name=WP_003402354.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214996.1;locus_tag=AL60_RS06710;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_003402354.1;transl_table=11 NZ_KK316846.1 RefSeq gene 235004 236359 . + . ID=gene-AL60_RS06715;Name=ldtMt5;gbkey=Gene;gene=ldtMt5;gene_biotype=protein_coding;locus_tag=AL60_RS06715;old_locus_tag=AL60_00208 NZ_KK316846.1 Protein Homology CDS 235004 236359 . + 0 ID=cds-WP_003402357.1;Parent=gene-AL60_RS06715;Dbxref=GenBank:WP_003402357.1;Name=WP_003402357.1;gbkey=CDS;gene=ldtMt5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214997.1;locus_tag=AL60_RS06715;product=L%2CD-transpeptidase LdtMt5;protein_id=WP_003402357.1;transl_table=11 NZ_KK316846.1 RefSeq gene 236340 237095 . - . ID=gene-AL60_RS06720;Name=AL60_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06720;old_locus_tag=AL60_00209 NZ_KK316846.1 Protein Homology CDS 236340 237095 . - 0 ID=cds-WP_003900154.1;Parent=gene-AL60_RS06720;Dbxref=GenBank:WP_003900154.1;Name=WP_003900154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214998.1;locus_tag=AL60_RS06720;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003900154.1;transl_table=11 NZ_KK316846.1 RefSeq gene 237278 238594 . + . ID=gene-AL60_RS06725;Name=AL60_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06725;old_locus_tag=AL60_00210 NZ_KK316846.1 Protein Homology CDS 237278 238594 . + 0 ID=cds-WP_003402361.1;Parent=gene-AL60_RS06725;Dbxref=GenBank:WP_003402361.1;Name=WP_003402361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214999.1;locus_tag=AL60_RS06725;product=transcriptional regulator;protein_id=WP_003402361.1;transl_table=11 NZ_KK316846.1 RefSeq gene 238642 240084 . + . ID=gene-AL60_RS06730;Name=mshA;gbkey=Gene;gene=mshA;gene_biotype=protein_coding;locus_tag=AL60_RS06730;old_locus_tag=AL60_00211 NZ_KK316846.1 Protein Homology CDS 238642 240084 . + 0 ID=cds-WP_003402367.1;Parent=gene-AL60_RS06730;Dbxref=GenBank:WP_003402367.1;Name=WP_003402367.1;Ontology_term=GO:0010125,GO:0008375;gbkey=CDS;gene=mshA;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215000.1;locus_tag=AL60_RS06730;product=D-inositol-3-phosphate glycosyltransferase;protein_id=WP_003402367.1;transl_table=11 NZ_KK316846.1 RefSeq gene 240081 240632 . + . ID=gene-AL60_RS06735;Name=AL60_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06735;old_locus_tag=AL60_00212 NZ_KK316846.1 Protein Homology CDS 240081 240632 . + 0 ID=cds-WP_003402370.1;Parent=gene-AL60_RS06735;Dbxref=GenBank:WP_003402370.1;Name=WP_003402370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215001.1;locus_tag=AL60_RS06735;product=type III secretion system chaperone family protein;protein_id=WP_003402370.1;transl_table=11 NZ_KK316846.1 RefSeq gene 240958 241563 . + . ID=gene-AL60_RS06740;Name=lysE;gbkey=Gene;gene=lysE;gene_biotype=protein_coding;locus_tag=AL60_RS06740;old_locus_tag=AL60_00213 NZ_KK316846.1 Protein Homology CDS 240958 241563 . + 0 ID=cds-WP_003402377.1;Parent=gene-AL60_RS06740;Dbxref=GenBank:WP_003402377.1;Name=WP_003402377.1;Ontology_term=GO:0016020;gbkey=CDS;gene=lysE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898479.1;locus_tag=AL60_RS06740;product=L-lysine exporter;protein_id=WP_003402377.1;transl_table=11 NZ_KK316846.1 RefSeq gene 241720 242469 . + . ID=gene-AL60_RS06745;Name=AL60_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06745;old_locus_tag=AL60_00214 NZ_KK316846.1 Protein Homology CDS 241720 242469 . + 0 ID=cds-WP_003402379.1;Parent=gene-AL60_RS06745;Dbxref=GenBank:WP_003402379.1;Name=WP_003402379.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177731.1;locus_tag=AL60_RS06745;product=phosphoglyceromutase;protein_id=WP_003402379.1;transl_table=11 NZ_KK316846.1 RefSeq gene 242643 243875 . + . ID=gene-AL60_RS06750;Name=senX3;gbkey=Gene;gene=senX3;gene_biotype=protein_coding;locus_tag=AL60_RS06750;old_locus_tag=AL60_00215 NZ_KK316846.1 Protein Homology CDS 242643 243875 . + 0 ID=cds-WP_003402390.1;Parent=gene-AL60_RS06750;Dbxref=GenBank:WP_003402390.1;Name=WP_003402390.1;gbkey=CDS;gene=senX3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215004.1;locus_tag=AL60_RS06750;product=two-component system sensor histidine kinase SenX3;protein_id=WP_003402390.1;transl_table=11 NZ_KK316846.1 RefSeq gene 244079 244762 . + . ID=gene-AL60_RS06755;Name=regX;gbkey=Gene;gene=regX;gene_biotype=protein_coding;locus_tag=AL60_RS06755;old_locus_tag=AL60_00216 NZ_KK316846.1 Protein Homology CDS 244079 244762 . + 0 ID=cds-WP_003402393.1;Parent=gene-AL60_RS06755;Dbxref=GenBank:WP_003402393.1;Name=WP_003402393.1;gbkey=CDS;gene=regX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402393.1;locus_tag=AL60_RS06755;product=two-component sensory transduction protein RegX;protein_id=WP_003402393.1;transl_table=11 NZ_KK316846.1 RefSeq gene 244759 246648 . - . ID=gene-AL60_RS06760;Name=AL60_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06760;old_locus_tag=AL60_00217 NZ_KK316846.1 Protein Homology CDS 244759 246648 . - 0 ID=cds-WP_003908534.1;Parent=gene-AL60_RS06760;Dbxref=GenBank:WP_003908534.1;Name=WP_003908534.1;Ontology_term=GO:0016614,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215006.2;locus_tag=AL60_RS06760;product=GMC family oxidoreductase;protein_id=WP_003908534.1;transl_table=11 NZ_KK316846.1 RefSeq gene 246645 246974 . - . ID=gene-AL60_RS06765;Name=AL60_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06765;old_locus_tag=AL60_00218 NZ_KK316846.1 Protein Homology CDS 246645 246974 . - 0 ID=cds-WP_003402400.1;Parent=gene-AL60_RS06765;Dbxref=GenBank:WP_003402400.1;Name=WP_003402400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177623.1;locus_tag=AL60_RS06765;product=hypothetical protein;protein_id=WP_003402400.1;transl_table=11 NZ_KK316846.1 RefSeq gene 246971 247921 . - . ID=gene-AL60_RS06770;Name=AL60_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06770;old_locus_tag=AL60_00219 NZ_KK316846.1 Protein Homology CDS 246971 247921 . - 0 ID=cds-WP_009937293.1;Parent=gene-AL60_RS06770;Dbxref=GenBank:WP_009937293.1;Name=WP_009937293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911182.1;locus_tag=AL60_RS06770;product=hypothetical protein;protein_id=WP_009937293.1;transl_table=11 NZ_KK316846.1 RefSeq gene 247977 248693 . + . ID=gene-AL60_RS06775;Name=AL60_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06775;old_locus_tag=AL60_00220 NZ_KK316846.1 Protein Homology CDS 247977 248693 . + 0 ID=cds-WP_003898483.1;Parent=gene-AL60_RS06775;Dbxref=GenBank:WP_003898483.1;Name=WP_003898483.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898483.1;locus_tag=AL60_RS06775;product=FadR/GntR family transcriptional regulator;protein_id=WP_003898483.1;transl_table=11 NZ_KK316846.1 RefSeq gene 248694 249488 . - . ID=gene-AL60_RS06780;Name=AL60_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06780;old_locus_tag=AL60_00221 NZ_KK316846.1 Protein Homology CDS 248694 249488 . - 0 ID=cds-WP_023637344.1;Parent=gene-AL60_RS06780;Dbxref=GenBank:WP_023637344.1;Name=WP_023637344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003879313.1;locus_tag=AL60_RS06780;product=DUF3109 family protein;protein_id=WP_023637344.1;transl_table=11 NZ_KK316846.1 RefSeq gene 249616 250650 . + . ID=gene-AL60_RS06785;Name=ppx1;gbkey=Gene;gene=ppx1;gene_biotype=protein_coding;locus_tag=AL60_RS06785;old_locus_tag=AL60_00222 NZ_KK316846.1 Protein Homology CDS 249616 250650 . + 0 ID=cds-WP_003402419.1;Parent=gene-AL60_RS06785;Dbxref=GenBank:WP_003402419.1;Name=WP_003402419.1;gbkey=CDS;gene=ppx1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402419.1;locus_tag=AL60_RS06785;product=exopolyphosphatase Ppx1;protein_id=WP_003402419.1;transl_table=11 NZ_KK316846.1 RefSeq gene 250647 251579 . + . ID=gene-AL60_RS06790;Name=AL60_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06790;old_locus_tag=AL60_00223 NZ_KK316846.1 Protein Homology CDS 250647 251579 . + 0 ID=cds-WP_003402426.1;Parent=gene-AL60_RS06790;Dbxref=GenBank:WP_003402426.1;Name=WP_003402426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215011.1;locus_tag=AL60_RS06790;product=hypothetical protein;protein_id=WP_003402426.1;transl_table=11 NZ_KK316846.1 RefSeq gene 251595 252437 . + . ID=gene-AL60_RS06795;Name=AL60_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06795;old_locus_tag=AL60_00224 NZ_KK316846.1 Protein Homology CDS 251595 252437 . + 0 ID=cds-WP_003402432.1;Parent=gene-AL60_RS06795;Dbxref=GenBank:WP_003402432.1;Name=WP_003402432.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215012.1;locus_tag=AL60_RS06795;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_003402432.1;transl_table=11 NZ_KK316846.1 RefSeq gene 252453 253328 . + . ID=gene-AL60_RS06800;Name=AL60_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06800;old_locus_tag=AL60_00225 NZ_KK316846.1 Protein Homology CDS 252453 253328 . + 0 ID=cds-WP_003402433.1;Parent=gene-AL60_RS06800;Dbxref=GenBank:WP_003402433.1;Name=WP_003402433.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215013.1;locus_tag=AL60_RS06800;product=thioesterase family protein;protein_id=WP_003402433.1;transl_table=11 NZ_KK316846.1 RefSeq gene 253365 254240 . + . ID=gene-AL60_RS06805;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=AL60_RS06805;old_locus_tag=AL60_00226 NZ_KK316846.1 Protein Homology CDS 253365 254240 . + 0 ID=cds-WP_003914605.1;Parent=gene-AL60_RS06805;Dbxref=GenBank:WP_003914605.1;Name=WP_003914605.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003892370.1;locus_tag=AL60_RS06805;product=pyrroline-5-carboxylate reductase;protein_id=WP_003914605.1;transl_table=11 NZ_KK316846.1 RefSeq gene 254381 254617 . + . ID=gene-AL60_RS06810;Name=AL60_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06810;old_locus_tag=AL60_00227 NZ_KK316846.1 Protein Homology CDS 254381 254617 . + 0 ID=cds-WP_003402437.1;Parent=gene-AL60_RS06810;Dbxref=GenBank:WP_003402437.1;Name=WP_003402437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177624.1;locus_tag=AL60_RS06810;product=cell division/environmental response transcriptional regulator;protein_id=WP_003402437.1;transl_table=11 NZ_KK316846.1 RefSeq gene 254745 254846 . + . ID=gene-AL60_RS06815;Name=AL60_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06815;old_locus_tag=AL60_00228 NZ_KK316846.1 Protein Homology CDS 254745 254846 . + 0 ID=cds-WP_003402602.1;Parent=gene-AL60_RS06815;Dbxref=GenBank:WP_003402602.1;Name=WP_003402602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402602.1;locus_tag=AL60_RS06815;product=30S ribosomal protein bS22;protein_id=WP_003402602.1;transl_table=11 NZ_KK316846.1 RefSeq gene 254924 256054 . + . ID=gene-AL60_RS06820;Name=AL60_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06820;old_locus_tag=AL60_00229 NZ_KK316846.1 Protein Homology CDS 254924 256054 . + 0 ID=cds-WP_003402607.1;Parent=gene-AL60_RS06820;Dbxref=GenBank:WP_003402607.1;Name=WP_003402607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215050.2;locus_tag=AL60_RS06820;product=SDR family oxidoreductase;protein_id=WP_003402607.1;transl_table=11 NZ_KK316846.1 RefSeq gene 256061 257137 . + . ID=gene-AL60_RS06825;Name=AL60_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06825;old_locus_tag=AL60_00230 NZ_KK316846.1 Protein Homology CDS 256061 257137 . + 0 ID=cds-WP_003898486.1;Parent=gene-AL60_RS06825;Dbxref=GenBank:WP_003898486.1;Name=WP_003898486.1;Ontology_term=GO:0006644,GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid metabolic process|0006644||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215016.1;locus_tag=AL60_RS06825;product=lysophospholipid acyltransferase family protein;protein_id=WP_003898486.1;transl_table=11 NZ_KK316846.1 RefSeq gene 257141 258049 . - . ID=gene-AL60_RS06830;Name=cmaA2;gbkey=Gene;gene=cmaA2;gene_biotype=protein_coding;locus_tag=AL60_RS06830;old_locus_tag=AL60_00231 NZ_KK316846.1 Protein Homology CDS 257141 258049 . - 0 ID=cds-WP_003402621.1;Parent=gene-AL60_RS06830;Dbxref=GenBank:WP_003402621.1;Name=WP_003402621.1;gbkey=CDS;gene=cmaA2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215017.1;locus_tag=AL60_RS06830;product=cyclopropane mycolic acid synthase CmaA2;protein_id=WP_003402621.1;transl_table=11 NZ_KK316846.1 RefSeq gene 258072 258572 . - . ID=gene-AL60_RS06835;Name=AL60_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06835;old_locus_tag=AL60_00232 NZ_KK316846.1 Protein Homology CDS 258072 258572 . - 0 ID=cds-WP_003402626.1;Parent=gene-AL60_RS06835;Dbxref=GenBank:WP_003402626.1;Name=WP_003402626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215018.1;locus_tag=AL60_RS06835;product=FAS1-like dehydratase domain-containing protein;protein_id=WP_003402626.1;transl_table=11 NZ_KK316846.1 RefSeq gene 258734 259642 . - . ID=gene-AL60_RS06840;Name=AL60_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06840;old_locus_tag=AL60_00233 NZ_KK316846.1 Protein Homology CDS 258734 259642 . - 0 ID=cds-WP_369810419.1;Parent=gene-AL60_RS06840;Dbxref=GenBank:WP_369810419.1;Name=WP_369810419.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908888.1;locus_tag=AL60_RS06840;product=HAD family hydrolase;protein_id=WP_369810419.1;transl_table=11 NZ_KK316846.1 RefSeq gene 260029 260472 . + . ID=gene-AL60_RS06845;Name=AL60_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06845;old_locus_tag=AL60_00234 NZ_KK316846.1 Protein Homology CDS 260029 260472 . + 0 ID=cds-WP_003402688.1;Parent=gene-AL60_RS06845;Dbxref=GenBank:WP_003402688.1;Name=WP_003402688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215020.1;locus_tag=AL60_RS06845;product=MmpS family transport accessory protein;protein_id=WP_003402688.1;transl_table=11 NZ_KK316846.1 RefSeq gene 260469 263375 . + . ID=gene-AL60_RS06850;Name=mmpL2;gbkey=Gene;gene=mmpL2;gene_biotype=protein_coding;locus_tag=AL60_RS06850;old_locus_tag=AL60_00235 NZ_KK316846.1 Protein Homology CDS 260469 263375 . + 0 ID=cds-WP_003900161.1;Parent=gene-AL60_RS06850;Dbxref=GenBank:WP_003900161.1;Name=WP_003900161.1;gbkey=CDS;gene=mmpL2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215021.1;locus_tag=AL60_RS06850;product=RND transporter MmpL2;protein_id=WP_003900161.1;transl_table=11 NZ_KK316846.1 RefSeq gene 263368 263661 . + . ID=gene-AL60_RS06855;Name=AL60_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06855;old_locus_tag=AL60_00236 NZ_KK316846.1 Protein Homology CDS 263368 263661 . + 0 ID=cds-WP_003402695.1;Parent=gene-AL60_RS06855;Dbxref=GenBank:WP_003402695.1;Name=WP_003402695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215022.1;locus_tag=AL60_RS06855;product=glutaredoxin family protein;protein_id=WP_003402695.1;transl_table=11 NZ_KK316846.1 RefSeq gene 263711 265117 . + . ID=gene-AL60_RS06860;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=AL60_RS06860;old_locus_tag=AL60_00237 NZ_KK316846.1 Protein Homology CDS 263711 265117 . + 0 ID=cds-WP_003402699.1;Parent=gene-AL60_RS06860;Dbxref=GenBank:WP_003402699.1;Name=WP_003402699.1;Ontology_term=GO:0008883;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215023.1;locus_tag=AL60_RS06860;product=glutamyl-tRNA reductase;protein_id=WP_003402699.1;transl_table=11 NZ_KK316846.1 RefSeq gene 265127 266056 . + . ID=gene-AL60_RS06865;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AL60_RS06865;old_locus_tag=AL60_00238 NZ_KK316846.1 Protein Homology CDS 265127 266056 . + 0 ID=cds-WP_003402702.1;Parent=gene-AL60_RS06865;Dbxref=GenBank:WP_003402702.1;Name=WP_003402702.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215024.1;locus_tag=AL60_RS06865;product=hydroxymethylbilane synthase;protein_id=WP_003402702.1;transl_table=11 NZ_KK316846.1 RefSeq gene 266089 267786 . + . ID=gene-AL60_RS06870;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=AL60_RS06870;old_locus_tag=AL60_00239 NZ_KK316846.1 Protein Homology CDS 266089 267786 . + 0 ID=cds-WP_003900163.1;Parent=gene-AL60_RS06870;Dbxref=GenBank:WP_003900163.1;Name=WP_003900163.1;Ontology_term=GO:0033014,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177733.1;locus_tag=AL60_RS06870;product=bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase;protein_id=WP_003900163.1;transl_table=11 NZ_KK316846.1 RefSeq gene 267872 268861 . + . ID=gene-AL60_RS06875;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AL60_RS06875;old_locus_tag=AL60_00240 NZ_KK316846.1 Protein Homology CDS 267872 268861 . + 0 ID=cds-WP_003898491.1;Parent=gene-AL60_RS06875;Dbxref=GenBank:WP_003898491.1;Name=WP_003898491.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215026.1;locus_tag=AL60_RS06875;product=porphobilinogen synthase;protein_id=WP_003898491.1;transl_table=11 NZ_KK316846.1 RefSeq gene 268874 269422 . + . ID=gene-AL60_RS06880;Name=AL60_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06880;old_locus_tag=AL60_00241 NZ_KK316846.1 Protein Homology CDS 268874 269422 . + 0 ID=cds-WP_003402713.1;Parent=gene-AL60_RS06880;Dbxref=GenBank:WP_003402713.1;Name=WP_003402713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215027.1;locus_tag=AL60_RS06880;product=hypothetical protein;protein_id=WP_003402713.1;transl_table=11 NZ_KK316846.1 RefSeq gene 269419 269718 . + . ID=gene-AL60_RS06885;Name=AL60_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06885;old_locus_tag=AL60_00242 NZ_KK316846.1 Protein Homology CDS 269419 269718 . + 0 ID=cds-WP_003402715.1;Parent=gene-AL60_RS06885;Dbxref=GenBank:WP_003402715.1;Name=WP_003402715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215028.1;locus_tag=AL60_RS06885;product=hypothetical protein;protein_id=WP_003402715.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 269797 271331 . + . ID=gene-AL60_RS06890;Name=AL60_RS06890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS06890;old_locus_tag=AL60_00243;pseudo=true NZ_KK316846.1 Protein Homology CDS 269797 271331 . + 0 ID=cds-AL60_RS06890;Parent=gene-AL60_RS06890;Note=frameshifted;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287795.1;locus_tag=AL60_RS06890;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 271328 271804 . - . ID=gene-AL60_RS06895;Name=oprA;gbkey=Gene;gene=oprA;gene_biotype=protein_coding;locus_tag=AL60_RS06895;old_locus_tag=AL60_00244 NZ_KK316846.1 Protein Homology CDS 271328 271804 . - 0 ID=cds-WP_003402807.1;Parent=gene-AL60_RS06895;Dbxref=GenBank:WP_003402807.1;Name=WP_003402807.1;gbkey=CDS;gene=oprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215030.1;locus_tag=AL60_RS06895;product=osmosensory protein OprA;protein_id=WP_003402807.1;transl_table=11 NZ_KK316846.1 RefSeq gene 272093 273325 . + . ID=gene-AL60_RS06900;Name=AL60_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06900;old_locus_tag=AL60_00245 NZ_KK316846.1 Protein Homology CDS 272093 273325 . + 0 ID=cds-WP_003916685.1;Parent=gene-AL60_RS06900;Dbxref=GenBank:WP_003916685.1;Name=WP_003916685.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873687.1;locus_tag=AL60_RS06900;product=acyltransferase family protein;protein_id=WP_003916685.1;transl_table=11 NZ_KK316846.1 RefSeq gene 273457 274152 . + . ID=gene-AL60_RS06905;Name=AL60_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06905;old_locus_tag=AL60_00246 NZ_KK316846.1 Protein Homology CDS 273457 274152 . + 0 ID=cds-WP_003402818.1;Parent=gene-AL60_RS06905;Dbxref=GenBank:WP_003402818.1;Name=WP_003402818.1;Ontology_term=GO:0016042,GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215032.1;locus_tag=AL60_RS06905;product=Rv0518 family GDSL lipase;protein_id=WP_003402818.1;transl_table=11 NZ_KK316846.1 RefSeq gene 274441 275298 . - . ID=gene-AL60_RS06910;Name=AL60_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06910;old_locus_tag=AL60_00247 NZ_KK316846.1 Protein Homology CDS 274441 275298 . - 0 ID=cds-WP_003912593.1;Parent=gene-AL60_RS06910;Dbxref=GenBank:WP_003912593.1;Name=WP_003912593.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912593.1;locus_tag=AL60_RS06910;product=alpha/beta hydrolase;protein_id=WP_003912593.1;transl_table=11 NZ_KK316846.1 RefSeq gene 275563 275874 . + . ID=gene-AL60_RS06915;Name=AL60_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06915;old_locus_tag=AL60_00248 NZ_KK316846.1 Protein Homology CDS 275563 275874 . + 0 ID=cds-WP_014585060.1;Parent=gene-AL60_RS06915;Dbxref=GenBank:WP_014585060.1;Name=WP_014585060.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF019846.6;locus_tag=AL60_RS06915;product=class I SAM-dependent methyltransferase;protein_id=WP_014585060.1;transl_table=11 NZ_KK316846.1 RefSeq gene 275867 276172 . + . ID=gene-AL60_RS06920;Name=AL60_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06920;old_locus_tag=AL60_00249 NZ_KK316846.1 Protein Homology CDS 275867 276172 . + 0 ID=cds-WP_003898493.1;Parent=gene-AL60_RS06920;Dbxref=GenBank:WP_003898493.1;Name=WP_003898493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402835.1;locus_tag=AL60_RS06920;product=hypothetical protein;protein_id=WP_003898493.1;transl_table=11 NZ_KK316846.1 RefSeq gene 276226 277611 . + . ID=gene-AL60_RS06925;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=AL60_RS06925;old_locus_tag=AL60_00250 NZ_KK316846.1 Protein Homology CDS 276226 277611 . + 0 ID=cds-WP_003911231.1;Parent=gene-AL60_RS06925;Dbxref=GenBank:WP_003911231.1;Name=WP_003911231.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911231.1;locus_tag=AL60_RS06925;product=amino acid permease;protein_id=WP_003911231.1;transl_table=11 NZ_KK316846.1 RefSeq gene 277595 277990 . - . ID=gene-AL60_RS06930;Name=AL60_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06930;old_locus_tag=AL60_00251 NZ_KK316846.1 Protein Homology CDS 277595 277990 . - 0 ID=cds-WP_003402842.1;Parent=gene-AL60_RS06930;Dbxref=GenBank:WP_003402842.1;Name=WP_003402842.1;Ontology_term=GO:0003824,GO:0070967;gbkey=CDS;go_function=catalytic activity|0003824||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215037.1;locus_tag=AL60_RS06930;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003402842.1;transl_table=11 NZ_KK316846.1 RefSeq gene 278104 279492 . + . ID=gene-AL60_RS06935;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AL60_RS06935;old_locus_tag=AL60_00252 NZ_KK316846.1 Protein Homology CDS 278104 279492 . + 0 ID=cds-WP_003402844.1;Parent=gene-AL60_RS06935;Dbxref=GenBank:WP_003402844.1;Name=WP_003402844.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215038.1;locus_tag=AL60_RS06935;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_003402844.1;transl_table=11 NZ_KK316846.1 RefSeq gene 279492 280100 . + . ID=gene-AL60_RS06940;Name=AL60_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06940;old_locus_tag=AL60_00253 NZ_KK316846.1 Protein Homology CDS 279492 280100 . + 0 ID=cds-WP_031721479.1;Parent=gene-AL60_RS06940;Dbxref=GenBank:WP_031721479.1;Name=WP_031721479.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215039.1;locus_tag=AL60_RS06940;product=histidine phosphatase family protein;protein_id=WP_031721479.1;transl_table=11 NZ_KK316846.1 RefSeq gene 280154 280765 . + . ID=gene-AL60_RS06945;Name=AL60_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06945;old_locus_tag=AL60_00254 NZ_KK316846.1 Protein Homology CDS 280154 280765 . + 0 ID=cds-WP_003911234.1;Parent=gene-AL60_RS06945;Dbxref=GenBank:WP_003911234.1;Name=WP_003911234.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911234.1;locus_tag=AL60_RS06945;product=TlpA disulfide reductase family protein;protein_id=WP_003911234.1;transl_table=11 NZ_KK316846.1 RefSeq gene 280762 281541 . + . ID=gene-AL60_RS06950;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=AL60_RS06950;old_locus_tag=AL60_00255 NZ_KK316846.1 Protein Homology CDS 280762 281541 . + 0 ID=cds-WP_003402847.1;Parent=gene-AL60_RS06950;Dbxref=GenBank:WP_003402847.1;Name=WP_003402847.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;gene=ccdA;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177735.1;locus_tag=AL60_RS06950;product=cytochrome c biogenesis CcdA family protein;protein_id=WP_003402847.1;transl_table=11 NZ_KK316846.1 RefSeq gene 281574 283163 . + . ID=gene-AL60_RS06955;Name=resB;gbkey=Gene;gene=resB;gene_biotype=protein_coding;locus_tag=AL60_RS06955;old_locus_tag=AL60_00256 NZ_KK316846.1 Protein Homology CDS 281574 283163 . + 0 ID=cds-WP_003402848.1;Parent=gene-AL60_RS06955;Dbxref=GenBank:WP_003402848.1;Name=WP_003402848.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;gene=resB;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215042.1;locus_tag=AL60_RS06955;product=cytochrome c biogenesis protein ResB;protein_id=WP_003402848.1;transl_table=11 NZ_KK316846.1 RefSeq gene 283160 284134 . + . ID=gene-AL60_RS06960;Name=ccsB;gbkey=Gene;gene=ccsB;gene_biotype=protein_coding;locus_tag=AL60_RS06960;old_locus_tag=AL60_00257 NZ_KK316846.1 Protein Homology CDS 283160 284134 . + 0 ID=cds-WP_003402849.1;Parent=gene-AL60_RS06960;Dbxref=GenBank:WP_003402849.1;Name=WP_003402849.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsB;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215041.2;locus_tag=AL60_RS06960;product=c-type cytochrome biogenesis protein CcsB;protein_id=WP_003402849.1;transl_table=11 NZ_KK316846.1 RefSeq gene 284176 285393 . + . ID=gene-AL60_RS06965;Name=AL60_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06965;old_locus_tag=AL60_00258 NZ_KK316846.1 Protein Homology CDS 284176 285393 . + 0 ID=cds-WP_003898495.1;Parent=gene-AL60_RS06965;Dbxref=GenBank:WP_003898495.1;Name=WP_003898495.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215044.1;locus_tag=AL60_RS06965;product=MinD/ParA family ATP-binding protein;protein_id=WP_003898495.1;transl_table=11 NZ_KK316846.1 RefSeq gene 285390 285551 . - . ID=gene-AL60_RS06970;Name=AL60_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06970;old_locus_tag=AL60_00259 NZ_KK316846.1 Protein Homology CDS 285390 285551 . - 0 ID=cds-WP_003402851.1;Parent=gene-AL60_RS06970;Dbxref=GenBank:WP_003402851.1;Name=WP_003402851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409181.1;locus_tag=AL60_RS06970;product=hypothetical protein;protein_id=WP_003402851.1;transl_table=11 NZ_KK316846.1 RefSeq gene 285598 285915 . + . ID=gene-AL60_RS06975;Name=AL60_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06975;old_locus_tag=AL60_00260 NZ_KK316846.1 Protein Homology CDS 285598 285915 . + 0 ID=cds-WP_003402853.1;Parent=gene-AL60_RS06975;Dbxref=GenBank:WP_003402853.1;Name=WP_003402853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215045.1;locus_tag=AL60_RS06975;product=DUF4229 domain-containing protein;protein_id=WP_003402853.1;transl_table=11 NZ_KK316846.1 RefSeq gene 286062 287930 . + . ID=gene-AL60_RS06980;Name=AL60_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS06980;old_locus_tag=AL60_00261 NZ_KK316846.1 Protein Homology CDS 286062 287930 . + 0 ID=cds-WP_009938238.1;Parent=gene-AL60_RS06980;Dbxref=GenBank:WP_009938238.1;Name=WP_009938238.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177736.1;locus_tag=AL60_RS06980;product=PE family protein;protein_id=WP_009938238.1;transl_table=11 NZ_KK316846.1 RefSeq gene 287826 288833 . - . ID=gene-AL60_RS06985;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=AL60_RS06985;old_locus_tag=AL60_00262 NZ_KK316846.1 Protein Homology CDS 287826 288833 . - 0 ID=cds-WP_003402861.1;Parent=gene-AL60_RS06985;Dbxref=GenBank:WP_003402861.1;Name=WP_003402861.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabH;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215047.1;locus_tag=AL60_RS06985;product=beta-ketoacyl-ACP synthase III;protein_id=WP_003402861.1;transl_table=11 NZ_KK316846.1 RefSeq gene 288915 289793 . - . ID=gene-AL60_RS06990;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=AL60_RS06990;old_locus_tag=AL60_00263 NZ_KK316846.1 Protein Homology CDS 288915 289793 . - 0 ID=cds-WP_003402865.1;Parent=gene-AL60_RS06990;Dbxref=GenBank:WP_003402865.1;Name=WP_003402865.1;Ontology_term=GO:0009234,GO:0046428,GO:0016020;gbkey=CDS;gene=menA;go_component=membrane|0016020||IEA;go_function=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215048.1;locus_tag=AL60_RS06990;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_003402865.1;transl_table=11 NZ_KK316846.1 RefSeq gene 289828 290604 . + . ID=gene-AL60_RS06995;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=AL60_RS06995;old_locus_tag=AL60_00264 NZ_KK316846.1 Protein Homology CDS 289828 290604 . + 0 ID=cds-WP_003911222.1;Parent=gene-AL60_RS06995;Dbxref=GenBank:WP_003911222.1;Name=WP_003911222.1;Ontology_term=GO:0009116,GO:0017061;gbkey=CDS;gene=pnp;go_function=S-methyl-5-thioadenosine phosphorylase activity|0017061||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009934924.1;locus_tag=AL60_RS06995;product=S-methyl-5'-thioadenosine phosphorylase;protein_id=WP_003911222.1;transl_table=11 NZ_KK316846.1 RefSeq gene 290601 291641 . + . ID=gene-AL60_RS07000;Name=AL60_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07000;old_locus_tag=AL60_00265 NZ_KK316846.1 Protein Homology CDS 290601 291641 . + 0 ID=cds-WP_003402868.1;Parent=gene-AL60_RS07000;Dbxref=GenBank:WP_003402868.1;Name=WP_003402868.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177737.1;locus_tag=AL60_RS07000;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003402868.1;transl_table=11 NZ_KK316846.1 RefSeq gene 291651 293084 . - . ID=gene-AL60_RS07005;Name=AL60_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07005;old_locus_tag=AL60_00266 NZ_KK316846.1 Protein Homology CDS 291651 293084 . - 0 ID=cds-WP_003402870.1;Parent=gene-AL60_RS07005;Dbxref=GenBank:WP_003402870.1;Name=WP_003402870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215051.1;locus_tag=AL60_RS07005;product=DUF7937 domain-containing protein;protein_id=WP_003402870.1;transl_table=11 NZ_KK316846.1 RefSeq gene 293393 295039 . + . ID=gene-AL60_RS07010;Name=AL60_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07010;old_locus_tag=AL60_00267 NZ_KK316846.1 Protein Homology CDS 293393 295039 . + 0 ID=cds-WP_003900169.1;Parent=gene-AL60_RS07010;Dbxref=GenBank:WP_003900169.1;Name=WP_003900169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215052.1;locus_tag=AL60_RS07010;product=DUF7159 family protein;protein_id=WP_003900169.1;transl_table=11 NZ_KK316846.1 RefSeq gene 295072 295728 . + . ID=gene-AL60_RS07015;Name=AL60_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07015;old_locus_tag=AL60_00268 NZ_KK316846.1 Protein Homology CDS 295072 295728 . + 0 ID=cds-WP_003898499.1;Parent=gene-AL60_RS07015;Dbxref=GenBank:WP_003898499.1;Name=WP_003898499.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898499.1;locus_tag=AL60_RS07015;product=glycosyltransferase family 2 protein;protein_id=WP_003898499.1;transl_table=11 NZ_KK316846.1 RefSeq gene 295725 296387 . + . ID=gene-AL60_RS07020;Name=AL60_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07020;old_locus_tag=AL60_00269 NZ_KK316846.1 Protein Homology CDS 295725 296387 . + 0 ID=cds-WP_003402886.1;Parent=gene-AL60_RS07020;Dbxref=GenBank:WP_003402886.1;Name=WP_003402886.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215054.1;locus_tag=AL60_RS07020;product=TIGR04282 family arsenosugar biosynthesis glycosyltransferase;protein_id=WP_003402886.1;transl_table=11 NZ_KK316846.1 RefSeq gene 296408 297757 . - . ID=gene-AL60_RS07025;Name=AL60_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07025;old_locus_tag=AL60_00270 NZ_KK316846.1 Protein Homology CDS 296408 297757 . - 0 ID=cds-WP_003402890.1;Parent=gene-AL60_RS07025;Dbxref=GenBank:WP_003402890.1;Name=WP_003402890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215055.1;locus_tag=AL60_RS07025;product=integral membrane protein;protein_id=WP_003402890.1;transl_table=11 NZ_KK316846.1 RefSeq gene 297769 298857 . - . ID=gene-AL60_RS07030;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=AL60_RS07030;old_locus_tag=AL60_00271 NZ_KK316846.1 Protein Homology CDS 297769 298857 . - 0 ID=cds-WP_003402892.1;Parent=gene-AL60_RS07030;Dbxref=GenBank:WP_003402892.1;Name=WP_003402892.1;gbkey=CDS;gene=menE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215056.1;locus_tag=AL60_RS07030;product=o-succinylbenzoate--CoA ligase;protein_id=WP_003402892.1;transl_table=11 NZ_KK316846.1 RefSeq gene 298926 299228 . - . ID=gene-AL60_RS07035;Name=AL60_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07035;old_locus_tag=AL60_00272 NZ_KK316846.1 Protein Homology CDS 298926 299228 . - 0 ID=cds-WP_003402896.1;Parent=gene-AL60_RS07035;Dbxref=GenBank:WP_003402896.1;Name=WP_003402896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215057.1;locus_tag=AL60_RS07035;product=DUF3349 domain-containing protein;protein_id=WP_003402896.1;transl_table=11 NZ_KK316846.1 RefSeq gene 299288 299566 . - . ID=gene-AL60_RS07040;Name=AL60_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07040;old_locus_tag=AL60_00273 NZ_KK316846.1 Protein Homology CDS 299288 299566 . - 0 ID=cds-WP_003402901.1;Parent=gene-AL60_RS07040;Dbxref=GenBank:WP_003402901.1;Name=WP_003402901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215058.1;locus_tag=AL60_RS07040;product=hypothetical protein;protein_id=WP_003402901.1;transl_table=11 NZ_KK316846.1 RefSeq gene 299563 300816 . - . ID=gene-AL60_RS07045;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=AL60_RS07045;old_locus_tag=AL60_00274 NZ_KK316846.1 Protein Homology CDS 299563 300816 . - 0 ID=cds-WP_003402904.1;Parent=gene-AL60_RS07045;Dbxref=GenBank:WP_003402904.1;Name=WP_003402904.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;gene=pitA;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215059.1;locus_tag=AL60_RS07045;product=inorganic phosphate transporter;protein_id=WP_003402904.1;transl_table=11 NZ_KK316846.1 RefSeq gene 300936 301322 . - . ID=gene-AL60_RS07050;Name=AL60_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07050;old_locus_tag=AL60_00275 NZ_KK316846.1 Protein Homology CDS 300936 301322 . - 0 ID=cds-WP_003402907.1;Parent=gene-AL60_RS07050;Dbxref=GenBank:WP_003402907.1;Name=WP_003402907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215060.1;locus_tag=AL60_RS07050;product=VOC family protein;protein_id=WP_003402907.1;transl_table=11 NZ_KK316846.1 RefSeq gene 301385 302269 . - . ID=gene-AL60_RS07055;Name=AL60_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07055;old_locus_tag=AL60_00276 NZ_KK316846.1 Protein Homology CDS 301385 302269 . - 0 ID=cds-WP_003402909.1;Parent=gene-AL60_RS07055;Dbxref=GenBank:WP_003402909.1;Name=WP_003402909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215061.1;locus_tag=AL60_RS07055;product=SDR family oxidoreductase;protein_id=WP_003402909.1;transl_table=11 NZ_KK316846.1 RefSeq gene 302365 303267 . - . ID=gene-AL60_RS07060;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=AL60_RS07060;old_locus_tag=AL60_00277 NZ_KK316846.1 Protein Homology CDS 302365 303267 . - 0 ID=cds-WP_003915439.1;Parent=gene-AL60_RS07060;Dbxref=GenBank:WP_003915439.1;Name=WP_003915439.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020727493.1;locus_tag=AL60_RS07060;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_003915439.1;transl_table=11 NZ_KK316846.1 RefSeq gene 303581 303994 . - . ID=gene-AL60_RS07065;Name=AL60_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07065;old_locus_tag=AL60_00278 NZ_KK316846.1 Protein Homology CDS 303581 303994 . - 0 ID=cds-WP_003898500.1;Parent=gene-AL60_RS07065;Dbxref=GenBank:WP_003898500.1;Name=WP_003898500.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215063.1;locus_tag=AL60_RS07065;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003898500.1;transl_table=11 NZ_KK316846.1 RefSeq gene 303991 304257 . - . ID=gene-AL60_RS07070;Name=AL60_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07070;old_locus_tag=AL60_00279 NZ_KK316846.1 Protein Homology CDS 303991 304257 . - 0 ID=cds-WP_003402915.1;Parent=gene-AL60_RS07070;Dbxref=GenBank:WP_003402915.1;Name=WP_003402915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215064.1;locus_tag=AL60_RS07070;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_003402915.1;transl_table=11 NZ_KK316846.1 RefSeq gene 304449 306164 . - . ID=gene-AL60_RS07075;Name=fadD8;gbkey=Gene;gene=fadD8;gene_biotype=protein_coding;locus_tag=AL60_RS07075;old_locus_tag=AL60_00280 NZ_KK316846.1 Protein Homology CDS 304449 306164 . - 0 ID=cds-WP_003402917.1;Parent=gene-AL60_RS07075;Dbxref=GenBank:WP_003402917.1;Name=WP_003402917.1;gbkey=CDS;gene=fadD8;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=AL60_RS07075;product=fatty-acid--CoA ligase FadD8;protein_id=WP_003402917.1;transl_table=11 NZ_KK316846.1 RefSeq gene 306242 307846 . + . ID=gene-AL60_RS07080;Name=AL60_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07080;old_locus_tag=AL60_00281 NZ_KK316846.1 Protein Homology CDS 306242 307846 . + 0 ID=cds-WP_003402920.1;Parent=gene-AL60_RS07080;Dbxref=GenBank:WP_003402920.1;Name=WP_003402920.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215066.1;locus_tag=AL60_RS07080;product=amidohydrolase;protein_id=WP_003402920.1;transl_table=11 NZ_KK316846.1 RefSeq gene 307843 308823 . + . ID=gene-AL60_RS07085;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=AL60_RS07085;old_locus_tag=AL60_00282 NZ_KK316846.1 Protein Homology CDS 307843 308823 . + 0 ID=cds-WP_003402923.1;Parent=gene-AL60_RS07085;Dbxref=GenBank:WP_003402923.1;Name=WP_003402923.1;gbkey=CDS;gene=menC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215067.1;locus_tag=AL60_RS07085;product=o-succinylbenzoate synthase;protein_id=WP_003402923.1;transl_table=11 NZ_KK316846.1 RefSeq gene 308820 309608 . + . ID=gene-AL60_RS07090;Name=bpoC;gbkey=Gene;gene=bpoC;gene_biotype=protein_coding;locus_tag=AL60_RS07090;old_locus_tag=AL60_00283 NZ_KK316846.1 Protein Homology CDS 308820 309608 . + 0 ID=cds-WP_003402925.1;Parent=gene-AL60_RS07090;Dbxref=GenBank:WP_003402925.1;Name=WP_003402925.1;gbkey=CDS;gene=bpoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215068.1;locus_tag=AL60_RS07090;product=alpha/beta fold hydrolase;protein_id=WP_003402925.1;transl_table=11 NZ_KK316846.1 RefSeq gene 309651 311315 . + . ID=gene-AL60_RS07095;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=AL60_RS07095;old_locus_tag=AL60_00284 NZ_KK316846.1 Protein Homology CDS 309651 311315 . + 0 ID=cds-WP_003402927.1;Parent=gene-AL60_RS07095;Dbxref=GenBank:WP_003402927.1;Name=WP_003402927.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215069.1;locus_tag=AL60_RS07095;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_003402927.1;transl_table=11 NZ_KK316846.1 RefSeq gene 311312 311827 . + . ID=gene-AL60_RS07100;Name=AL60_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07100;old_locus_tag=AL60_00285 NZ_KK316846.1 Protein Homology CDS 311312 311827 . + 0 ID=cds-WP_003402929.1;Parent=gene-AL60_RS07100;Dbxref=GenBank:WP_003402929.1;Name=WP_003402929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215070.1;locus_tag=AL60_RS07100;product=DUF3592 domain-containing protein;protein_id=WP_003402929.1;transl_table=11 NZ_KK316846.1 RefSeq gene 311898 313025 . + . ID=gene-AL60_RS07105;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=AL60_RS07105;old_locus_tag=AL60_00286 NZ_KK316846.1 Protein Homology CDS 311898 313025 . + 0 ID=cds-WP_003898502.1;Parent=gene-AL60_RS07105;Dbxref=GenBank:WP_003898502.1;Name=WP_003898502.1;gbkey=CDS;gene=mgtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912598.1;locus_tag=AL60_RS07105;product=GDP-mannose-dependent alpha-mannosyltransferase;protein_id=WP_003898502.1;transl_table=11 NZ_KK316846.1 RefSeq gene 313042 313746 . + . ID=gene-AL60_RS07110;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=AL60_RS07110;old_locus_tag=AL60_00287 NZ_KK316846.1 Protein Homology CDS 313042 313746 . + 0 ID=cds-WP_003402936.1;Parent=gene-AL60_RS07110;Dbxref=GenBank:WP_003402936.1;Name=WP_003402936.1;Ontology_term=GO:0008168;gbkey=CDS;gene=menH;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177738.1;locus_tag=AL60_RS07110;product=demethylmenaquinone methyltransferase;protein_id=WP_003402936.1;transl_table=11 NZ_KK316846.1 RefSeq gene 313760 314098 . - . ID=gene-AL60_RS07115;Name=AL60_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07115;old_locus_tag=AL60_00288 NZ_KK316846.1 Protein Homology CDS 313760 314098 . - 0 ID=cds-WP_003402937.1;Parent=gene-AL60_RS07115;Dbxref=GenBank:WP_003402937.1;Name=WP_003402937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215073.1;locus_tag=AL60_RS07115;product=DUF732 domain-containing protein;protein_id=WP_003402937.1;transl_table=11 NZ_KK316846.1 RefSeq gene 314132 314809 . - . ID=gene-AL60_RS07120;Name=AL60_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07120;old_locus_tag=AL60_00289 NZ_KK316846.1 Protein Homology CDS 314132 314809 . - 0 ID=cds-WP_003911240.1;Parent=gene-AL60_RS07120;Dbxref=GenBank:WP_003911240.1;Name=WP_003911240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911240.1;locus_tag=AL60_RS07120;product=benzoquinone methyltransferase;protein_id=WP_003911240.1;transl_table=11 NZ_KK316846.1 RefSeq gene 314882 316108 . - . ID=gene-AL60_RS07125;Name=menJ;gbkey=Gene;gene=menJ;gene_biotype=protein_coding;locus_tag=AL60_RS07125;old_locus_tag=AL60_00290 NZ_KK316846.1 Protein Homology CDS 314882 316108 . - 0 ID=cds-WP_003402939.1;Parent=gene-AL60_RS07125;Dbxref=GenBank:WP_003402939.1;Name=WP_003402939.1;Ontology_term=GO:0009234,GO:0016627,GO:0016628;gbkey=CDS;gene=menJ;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215075.1;locus_tag=AL60_RS07125;product=menaquinone reductase;protein_id=WP_003402939.1;transl_table=11 NZ_KK316846.1 RefSeq gene 316124 317131 . + . ID=gene-AL60_RS07130;Name=grcC;gbkey=Gene;gene=grcC;gene_biotype=protein_coding;locus_tag=AL60_RS07130;old_locus_tag=AL60_00291 NZ_KK316846.1 Protein Homology CDS 316124 317131 . + 0 ID=cds-WP_003402957.1;Parent=gene-AL60_RS07130;Dbxref=GenBank:WP_003402957.1;Name=WP_003402957.1;gbkey=CDS;gene=grcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215076.1;locus_tag=AL60_RS07130;product=polyprenyl-diphosphate synthase GrcC;protein_id=WP_003402957.1;transl_table=11 NZ_KK316846.1 RefSeq gene 317232 318092 . + . ID=gene-AL60_RS07135;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AL60_RS07135;old_locus_tag=AL60_00292 NZ_KK316846.1 Protein Homology CDS 317232 318092 . + 0 ID=cds-WP_003402959.1;Parent=gene-AL60_RS07135;Dbxref=GenBank:WP_003402959.1;Name=WP_003402959.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215077.1;locus_tag=AL60_RS07135;product=zinc metalloprotease HtpX;protein_id=WP_003402959.1;transl_table=11 NZ_KK316846.1 RefSeq gene 318277 319302 . - . ID=gene-AL60_RS07140;Name=AL60_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07140;old_locus_tag=AL60_00293 NZ_KK316846.1 Protein Homology CDS 318277 319302 . - 0 ID=cds-WP_003900965.1;Parent=gene-AL60_RS07140;Dbxref=GenBank:WP_003900965.1;Name=WP_003900965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215078.1;locus_tag=AL60_RS07140;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_003900965.1;transl_table=11 NZ_KK316846.1 RefSeq gene 319363 320823 . - . ID=gene-AL60_RS07145;Name=AL60_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07145;old_locus_tag=AL60_00294 NZ_KK316846.1 Protein Homology CDS 319363 320823 . - 0 ID=cds-WP_003402981.1;Parent=gene-AL60_RS07145;Dbxref=GenBank:WP_003402981.1;Name=WP_003402981.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215079.1;locus_tag=AL60_RS07145;product=flavin-containing monooxygenase;protein_id=WP_003402981.1;transl_table=11 NZ_KK316846.1 RefSeq gene 320901 321392 . - . ID=gene-AL60_RS07150;Name=AL60_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07150;old_locus_tag=AL60_00295 NZ_KK316846.1 Protein Homology CDS 320901 321392 . - 0 ID=cds-WP_003402987.1;Parent=gene-AL60_RS07150;Dbxref=GenBank:WP_003402987.1;Name=WP_003402987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215080.1;locus_tag=AL60_RS07150;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_003402987.1;transl_table=11 NZ_KK316846.1 RefSeq gene 321462 321545 . + . ID=gene-AL60_RS07155;Name=AL60_RS07155;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS07155;old_locus_tag=AL60_00296 NZ_KK316846.1 tRNAscan-SE tRNA 321462 321545 . + . ID=rna-AL60_RS07155;Parent=gene-AL60_RS07155;anticodon=(pos:321496..321498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS07155;product=tRNA-Tyr NZ_KK316846.1 tRNAscan-SE exon 321462 321545 . + . ID=exon-AL60_RS07155-1;Parent=rna-AL60_RS07155;anticodon=(pos:321496..321498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS07155;product=tRNA-Tyr NZ_KK316846.1 RefSeq gene 321674 322693 . + . ID=gene-AL60_RS07160;Name=AL60_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07160;old_locus_tag=AL60_00297 NZ_KK316846.1 Protein Homology CDS 321674 322693 . + 0 ID=cds-WP_003900173.1;Parent=gene-AL60_RS07160;Dbxref=GenBank:WP_003900173.1;Name=WP_003900173.1;Ontology_term=GO:0008171;gbkey=CDS;go_function=O-methyltransferase activity|0008171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215081.1;locus_tag=AL60_RS07160;product=methyltransferase;protein_id=WP_003900173.1;transl_table=11 NZ_KK316846.1 RefSeq gene 322803 324221 . + . ID=gene-AL60_RS07165;Name=AL60_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07165;old_locus_tag=AL60_00298 NZ_KK316846.1 Protein Homology CDS 322803 324221 . + 0 ID=cds-WP_003402992.1;Parent=gene-AL60_RS07165;Dbxref=GenBank:WP_003402992.1;Name=WP_003402992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215082.1;locus_tag=AL60_RS07165;product=cytochrome P450;protein_id=WP_003402992.1;transl_table=11 NZ_KK316846.1 RefSeq gene 324356 324622 . + . ID=gene-AL60_RS07170;Name=AL60_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07170;old_locus_tag=AL60_00299 NZ_KK316846.1 Protein Homology CDS 324356 324622 . + 0 ID=cds-WP_003402995.1;Parent=gene-AL60_RS07170;Dbxref=GenBank:WP_003402995.1;Name=WP_003402995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215083.1;locus_tag=AL60_RS07170;product=DUF1918 domain-containing protein;protein_id=WP_003402995.1;transl_table=11 NZ_KK316846.1 RefSeq gene 324648 326726 . + . ID=gene-AL60_RS07175;Name=nrdZ;gbkey=Gene;gene=nrdZ;gene_biotype=protein_coding;locus_tag=AL60_RS07175;old_locus_tag=AL60_00300 NZ_KK316846.1 Protein Homology CDS 324648 326726 . + 0 ID=cds-WP_003402998.1;Parent=gene-AL60_RS07175;Dbxref=GenBank:WP_003402998.1;Name=WP_003402998.1;Ontology_term=GO:0000166,GO:0004748,GO:0031419;gbkey=CDS;gene=nrdZ;go_function=nucleotide binding|0000166||IEA,ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215084.1;locus_tag=AL60_RS07175;product=adenosylcobalamin-dependent ribonucleoside-diphosphate reductase;protein_id=WP_003402998.1;transl_table=11 NZ_KK316846.1 RefSeq gene 326840 328171 . - . ID=gene-AL60_RS07180;Name=AL60_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07180;old_locus_tag=AL60_00301 NZ_KK316846.1 Protein Homology CDS 326840 328171 . - 0 ID=cds-WP_003403001.1;Parent=gene-AL60_RS07180;Dbxref=GenBank:WP_003403001.1;Name=WP_003403001.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215085.1;locus_tag=AL60_RS07180;product=phosphoribosyltransferase family protein;protein_id=WP_003403001.1;transl_table=11 NZ_KK316846.1 RefSeq gene 328395 328736 . - . ID=gene-AL60_RS07185;Name=AL60_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07185;old_locus_tag=AL60_00302 NZ_KK316846.1 Protein Homology CDS 328395 328736 . - 0 ID=cds-WP_003898507.1;Parent=gene-AL60_RS07185;Dbxref=GenBank:WP_003898507.1;Name=WP_003898507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215086.1;locus_tag=AL60_RS07185;product=hypothetical protein;protein_id=WP_003898507.1;transl_table=11 NZ_KK316846.1 RefSeq gene 329204 330595 . - . ID=gene-AL60_RS07190;Name=AL60_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07190;old_locus_tag=AL60_00303 NZ_KK316846.1 Protein Homology CDS 329204 330595 . - 0 ID=cds-WP_003403007.1;Parent=gene-AL60_RS07190;Dbxref=GenBank:WP_003403007.1;Name=WP_003403007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215087.1;locus_tag=AL60_RS07190;product=nicotinate phosphoribosyltransferase;protein_id=WP_003403007.1;transl_table=11 NZ_KK316846.1 RefSeq gene 330605 331747 . - . ID=gene-AL60_RS07195;Name=AL60_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07195;old_locus_tag=AL60_00304 NZ_KK316846.1 Protein Homology CDS 330605 331747 . - 0 ID=cds-WP_003403008.1;Parent=gene-AL60_RS07195;Dbxref=GenBank:WP_003403008.1;Name=WP_003403008.1;Ontology_term=GO:0045227,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215088.1;locus_tag=AL60_RS07195;product=CapA family protein;protein_id=WP_003403008.1;transl_table=11 NZ_KK316846.1 RefSeq gene 331932 333098 . - . ID=gene-AL60_RS07200;Name=AL60_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07200;old_locus_tag=AL60_00305 NZ_KK316846.1 Protein Homology CDS 331932 333098 . - 0 ID=cds-WP_003898508.1;Parent=gene-AL60_RS07200;Dbxref=GenBank:WP_003898508.1;Name=WP_003898508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215089.1;locus_tag=AL60_RS07200;product=FAD-binding domain;protein_id=WP_003898508.1;transl_table=11 NZ_KK316846.1 RefSeq gene 333201 334505 . + . ID=gene-AL60_RS0104120;Name=AL60_RS0104120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104120;old_locus_tag=AL60_00306 NZ_KK316846.1 Protein Homology CDS 333201 334505 . + 0 ID=cds-WP_003900174.1;Parent=gene-AL60_RS0104120;Dbxref=GenBank:WP_003900174.1;Name=WP_003900174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215090.1;locus_tag=AL60_RS0104120;product=TIGR03086 family metal-binding protein;protein_id=WP_003900174.1;transl_table=11 NZ_KK316846.1 RefSeq gene 334519 335304 . + . ID=gene-AL60_RS07205;Name=AL60_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07205;old_locus_tag=AL60_00307 NZ_KK316846.1 Protein Homology CDS 334519 335304 . + 0 ID=cds-WP_003403012.1;Parent=gene-AL60_RS07205;Dbxref=GenBank:WP_003403012.1;Name=WP_003403012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215091.1;locus_tag=AL60_RS07205;product=VOC family protein;protein_id=WP_003403012.1;transl_table=11 NZ_KK316846.1 RefSeq gene 335349 339269 . - . ID=gene-AL60_RS07210;Name=AL60_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07210;old_locus_tag=AL60_00308 NZ_KK316846.1 Protein Homology CDS 335349 339269 . - 0 ID=cds-WP_010886080.1;Parent=gene-AL60_RS07210;Dbxref=GenBank:WP_010886080.1;Name=WP_010886080.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177739.1;locus_tag=AL60_RS07210;product=PE family protein;protein_id=WP_010886080.1;transl_table=11 NZ_KK316846.1 RefSeq gene 339591 340349 . + . ID=gene-AL60_RS07215;Name=AL60_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07215;old_locus_tag=AL60_00309 NZ_KK316846.1 Protein Homology CDS 339591 340349 . + 0 ID=cds-WP_003898511.1;Parent=gene-AL60_RS07215;Dbxref=GenBank:WP_003898511.1;Name=WP_003898511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215093.1;locus_tag=AL60_RS07215;product=Mut7-C RNAse domain-containing protein;protein_id=WP_003898511.1;transl_table=11 NZ_KK316846.1 RefSeq gene 340478 340969 . - . ID=gene-AL60_RS07220;Name=AL60_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07220;old_locus_tag=AL60_00310 NZ_KK316846.1 Protein Homology CDS 340478 340969 . - 0 ID=cds-WP_003403017.1;Parent=gene-AL60_RS07220;Dbxref=GenBank:WP_003403017.1;Name=WP_003403017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215094.1;locus_tag=AL60_RS07220;product=mycobacterial cell wall protein Rv0580c;protein_id=WP_003403017.1;transl_table=11 NZ_KK316846.1 RefSeq gene 341063 341278 . + . ID=gene-AL60_RS07225;Name=vapB26;gbkey=Gene;gene=vapB26;gene_biotype=protein_coding;locus_tag=AL60_RS07225;old_locus_tag=AL60_00311 NZ_KK316846.1 Protein Homology CDS 341063 341278 . + 0 ID=cds-WP_003403039.1;Parent=gene-AL60_RS07225;Dbxref=GenBank:WP_003403039.1;Name=WP_003403039.1;gbkey=CDS;gene=vapB26;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215095.1;locus_tag=AL60_RS07225;product=type II toxin-antitoxin system antitoxin VapB26;protein_id=WP_003403039.1;transl_table=11 NZ_KK316846.1 RefSeq gene 341275 341682 . + . ID=gene-AL60_RS07230;Name=vapC26;gbkey=Gene;gene=vapC26;gene_biotype=protein_coding;locus_tag=AL60_RS07230;old_locus_tag=AL60_00312 NZ_KK316846.1 Protein Homology CDS 341275 341682 . + 0 ID=cds-WP_003403047.1;Parent=gene-AL60_RS07230;Dbxref=GenBank:WP_003403047.1;Name=WP_003403047.1;gbkey=CDS;gene=vapC26;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215096.1;locus_tag=AL60_RS07230;product=type II toxin-antitoxin system toxin ribonuclease C26;protein_id=WP_003403047.1;transl_table=11 NZ_KK316846.1 RefSeq gene 341742 342428 . - . ID=gene-AL60_RS07235;Name=lpqN;gbkey=Gene;gene=lpqN;gene_biotype=protein_coding;locus_tag=AL60_RS07235;old_locus_tag=AL60_00313 NZ_KK316846.1 Protein Homology CDS 341742 342428 . - 0 ID=cds-WP_003403052.1;Parent=gene-AL60_RS07235;Dbxref=GenBank:WP_003403052.1;Name=WP_003403052.1;gbkey=CDS;gene=lpqN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215097.1;locus_tag=AL60_RS07235;product=envelope biogenesis lipoprotein LpqN;protein_id=WP_003403052.1;transl_table=11 NZ_KK316846.1 RefSeq gene 342582 345215 . + . ID=gene-AL60_RS07240;Name=AL60_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07240;old_locus_tag=AL60_00314 NZ_KK316846.1 Protein Homology CDS 342582 345215 . + 0 ID=cds-WP_003403055.1;Parent=gene-AL60_RS07240;Dbxref=GenBank:WP_003403055.1;Name=WP_003403055.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215098.1;locus_tag=AL60_RS07240;product=GH92 family glycosyl hydrolase;protein_id=WP_003403055.1;transl_table=11 NZ_KK316846.1 RefSeq gene 345238 347625 . - . ID=gene-AL60_RS07245;Name=AL60_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07245;old_locus_tag=AL60_00315 NZ_KK316846.1 Protein Homology CDS 345238 347625 . - 0 ID=cds-WP_003900178.1;Parent=gene-AL60_RS07245;Dbxref=GenBank:WP_003900178.1;Name=WP_003900178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215099.1;locus_tag=AL60_RS07245;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_003900178.1;transl_table=11 NZ_KK316846.1 RefSeq gene 347763 348485 . + . ID=gene-AL60_RS07250;Name=mce2R;gbkey=Gene;gene=mce2R;gene_biotype=protein_coding;locus_tag=AL60_RS07250;old_locus_tag=AL60_00316 NZ_KK316846.1 Protein Homology CDS 347763 348485 . + 0 ID=cds-WP_003403065.1;Parent=gene-AL60_RS07250;Dbxref=GenBank:WP_003403065.1;Name=WP_003403065.1;gbkey=CDS;gene=mce2R;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215100.1;locus_tag=AL60_RS07250;product=FadR family transcriptional regulator Mce2R;protein_id=WP_003403065.1;transl_table=11 NZ_KK316846.1 RefSeq gene 348482 349279 . + . ID=gene-AL60_RS07255;Name=AL60_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07255;old_locus_tag=AL60_00317 NZ_KK316846.1 Protein Homology CDS 348482 349279 . + 0 ID=cds-WP_003403095.1;Parent=gene-AL60_RS07255;Dbxref=GenBank:WP_003403095.1;Name=WP_003403095.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215101.1;locus_tag=AL60_RS07255;product=MlaE family ABC transporter permease;protein_id=WP_003403095.1;transl_table=11 NZ_KK316846.1 RefSeq gene 349281 350168 . + . ID=gene-AL60_RS07260;Name=AL60_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07260;old_locus_tag=AL60_00318 NZ_KK316846.1 Protein Homology CDS 349281 350168 . + 0 ID=cds-WP_003403101.1;Parent=gene-AL60_RS07260;Dbxref=GenBank:WP_003403101.1;Name=WP_003403101.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215102.1;locus_tag=AL60_RS07260;product=ABC transporter permease;protein_id=WP_003403101.1;transl_table=11 NZ_KK316846.1 RefSeq gene 350174 351388 . + . ID=gene-AL60_RS07265;Name=AL60_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07265;old_locus_tag=AL60_00319 NZ_KK316846.1 Protein Homology CDS 350174 351388 . + 0 ID=cds-WP_003403104.1;Parent=gene-AL60_RS07265;Dbxref=GenBank:WP_003403104.1;Name=WP_003403104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177740.1;locus_tag=AL60_RS07265;product=MCE family protein;protein_id=WP_003403104.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 351385 352415 . + . ID=gene-AL60_RS0104125;Name=AL60_RS0104125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0104125;old_locus_tag=AL60_00320;pseudo=true NZ_KK316846.1 Protein Homology CDS 351385 352415 . + 0 ID=cds-AL60_RS0104125;Parent=gene-AL60_RS0104125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873596.1;locus_tag=AL60_RS0104125;product=MCE family protein;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 352412 353857 . + . ID=gene-AL60_RS07270;Name=AL60_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07270;old_locus_tag=AL60_00322 NZ_KK316846.1 Protein Homology CDS 352412 353857 . + 0 ID=cds-WP_003900181.1;Parent=gene-AL60_RS07270;Dbxref=GenBank:WP_003900181.1;Name=WP_003900181.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215105.1;locus_tag=AL60_RS07270;product=virulence factor Mce family protein;protein_id=WP_003900181.1;transl_table=11 NZ_KK316846.1 RefSeq gene 353854 355380 . + . ID=gene-AL60_RS07275;Name=AL60_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07275;old_locus_tag=AL60_00323 NZ_KK316846.1 Protein Homology CDS 353854 355380 . + 0 ID=cds-WP_003403112.1;Parent=gene-AL60_RS07275;Dbxref=GenBank:WP_003403112.1;Name=WP_003403112.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215106.1;locus_tag=AL60_RS07275;product=virulence factor Mce family protein;protein_id=WP_003403112.1;transl_table=11 NZ_KK316846.1 RefSeq gene 355443 356585 . + . ID=gene-AL60_RS07280;Name=lprL;gbkey=Gene;gene=lprL;gene_biotype=protein_coding;locus_tag=AL60_RS07280;old_locus_tag=AL60_00324 NZ_KK316846.1 Protein Homology CDS 355443 356585 . + 0 ID=cds-WP_003911253.1;Parent=gene-AL60_RS07280;Dbxref=GenBank:WP_003911253.1;Name=WP_003911253.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=lprL;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911253.1;locus_tag=AL60_RS07280;product=virulence factor Mce family protein;protein_id=WP_003911253.1;transl_table=11 NZ_KK316846.1 RefSeq gene 356590 358140 . + . ID=gene-AL60_RS07285;Name=AL60_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07285;old_locus_tag=AL60_00325 NZ_KK316846.1 Protein Homology CDS 356590 358140 . + 0 ID=cds-WP_003403119.1;Parent=gene-AL60_RS07285;Dbxref=GenBank:WP_003403119.1;Name=WP_003403119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215108.1;locus_tag=AL60_RS07285;product=MCE family protein;protein_id=WP_003403119.1;transl_table=11 NZ_KK316846.1 RefSeq gene 358192 358584 . - . ID=gene-AL60_RS07290;Name=vapC4;gbkey=Gene;gene=vapC4;gene_biotype=protein_coding;locus_tag=AL60_RS07290;old_locus_tag=AL60_00326 NZ_KK316846.1 Protein Homology CDS 358192 358584 . - 0 ID=cds-WP_003403122.1;Parent=gene-AL60_RS07290;Dbxref=GenBank:WP_003403122.1;Name=WP_003403122.1;gbkey=CDS;gene=vapC4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215109.1;locus_tag=AL60_RS07290;product=type II toxin-antitoxin system toxin ribonuclease C4;protein_id=WP_003403122.1;transl_table=11 NZ_KK316846.1 RefSeq gene 358581 358838 . - . ID=gene-AL60_RS07295;Name=vapB4;gbkey=Gene;gene=vapB4;gene_biotype=protein_coding;locus_tag=AL60_RS07295;old_locus_tag=AL60_00327 NZ_KK316846.1 Protein Homology CDS 358581 358838 . - 0 ID=cds-WP_003403125.1;Parent=gene-AL60_RS07295;Dbxref=GenBank:WP_003403125.1;Name=WP_003403125.1;gbkey=CDS;gene=vapB4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215110.1;locus_tag=AL60_RS07295;product=type II toxin-antitoxin system antitoxin VapB4;protein_id=WP_003403125.1;transl_table=11 NZ_KK316846.1 RefSeq gene 359021 360256 . - . ID=gene-AL60_RS07300;Name=AL60_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07300;old_locus_tag=AL60_00328 NZ_KK316846.1 Protein Homology CDS 359021 360256 . - 0 ID=cds-WP_003403128.1;Parent=gene-AL60_RS07300;Dbxref=GenBank:WP_003403128.1;Name=WP_003403128.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215111.1;locus_tag=AL60_RS07300;product=ATP-binding protein;protein_id=WP_003403128.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 360358 360546 . + . ID=gene-AL60_RS27860;Name=AL60_RS27860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27860;partial=true;pseudo=true;start_range=.,360358 NZ_KK316846.1 Protein Homology CDS 360358 360546 . + 0 ID=cds-AL60_RS27860;Parent=gene-AL60_RS27860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013827543.1;locus_tag=AL60_RS27860;partial=true;product=hypothetical protein;pseudo=true;start_range=.,360358;transl_table=11 NZ_KK316846.1 RefSeq gene 360507 360920 . - . ID=gene-AL60_RS07305;Name=AL60_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07305;old_locus_tag=AL60_00329 NZ_KK316846.1 Protein Homology CDS 360507 360920 . - 0 ID=cds-WP_003403137.1;Parent=gene-AL60_RS07305;Dbxref=GenBank:WP_003403137.1;Name=WP_003403137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215112.1;locus_tag=AL60_RS07305;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403137.1;transl_table=11 NZ_KK316846.1 RefSeq gene 360917 361153 . - . ID=gene-AL60_RS07310;Name=vapB27;gbkey=Gene;gene=vapB27;gene_biotype=protein_coding;locus_tag=AL60_RS07310;old_locus_tag=AL60_00330 NZ_KK316846.1 Protein Homology CDS 360917 361153 . - 0 ID=cds-WP_003403139.1;Parent=gene-AL60_RS07310;Dbxref=GenBank:WP_003403139.1;Name=WP_003403139.1;gbkey=CDS;gene=vapB27;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215113.1;locus_tag=AL60_RS07310;product=type II toxin-antitoxin system antitoxin VapB27;protein_id=WP_003403139.1;transl_table=11 NZ_KK316846.1 RefSeq gene 361257 361763 . - . ID=gene-AL60_RS07315;Name=AL60_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07315;old_locus_tag=AL60_00331 NZ_KK316846.1 Protein Homology CDS 361257 361763 . - 0 ID=cds-WP_003900973.1;Parent=gene-AL60_RS07315;Dbxref=GenBank:WP_003900973.1;Name=WP_003900973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900973.1;locus_tag=AL60_RS07315;product=two component system sensor kinase HK1;protein_id=WP_003900973.1;transl_table=11 NZ_KK316846.1 RefSeq gene 361877 362407 . - . ID=gene-AL60_RS07320;Name=AL60_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07320;old_locus_tag=AL60_00332 NZ_KK316846.1 Protein Homology CDS 361877 362407 . - 0 ID=cds-WP_003917320.1;Parent=gene-AL60_RS07320;Dbxref=GenBank:WP_003917320.1;Name=WP_003917320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917320.1;locus_tag=AL60_RS07320;product=two component system sensor kinase HK2;protein_id=WP_003917320.1;transl_table=11 NZ_KK316846.1 RefSeq gene 362391 363086 . - . ID=gene-AL60_RS07325;Name=tcrA;gbkey=Gene;gene=tcrA;gene_biotype=protein_coding;locus_tag=AL60_RS07325;old_locus_tag=AL60_00333 NZ_KK316846.1 Protein Homology CDS 362391 363086 . - 0 ID=cds-WP_003918099.1;Parent=gene-AL60_RS07325;Dbxref=GenBank:WP_003918099.1;Name=WP_003918099.1;gbkey=CDS;gene=tcrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585072.1;locus_tag=AL60_RS07325;product=two-component system response regulator TcrA;protein_id=WP_003918099.1;transl_table=11 NZ_KK316846.1 RefSeq gene 363209 363520 . + . ID=gene-AL60_RS07330;Name=AL60_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07330;old_locus_tag=AL60_00334 NZ_KK316846.1 Protein Homology CDS 363209 363520 . + 0 ID=cds-WP_003403164.1;Parent=gene-AL60_RS07330;Dbxref=GenBank:WP_003403164.1;Name=WP_003403164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215117.1;locus_tag=AL60_RS07330;product=PepSY domain-containing protein;protein_id=WP_003403164.1;transl_table=11 NZ_KK316846.1 RefSeq gene 363592 364542 . + . ID=gene-AL60_RS07335;Name=lpqO;gbkey=Gene;gene=lpqO;gene_biotype=protein_coding;locus_tag=AL60_RS07335;old_locus_tag=AL60_00335 NZ_KK316846.1 Protein Homology CDS 363592 364542 . + 0 ID=cds-WP_003900184.1;Parent=gene-AL60_RS07335;Dbxref=GenBank:WP_003900184.1;Name=WP_003900184.1;gbkey=CDS;gene=lpqO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215118.1;locus_tag=AL60_RS07335;product=DUF1259 domain-containing protein;protein_id=WP_003900184.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 364595 364689 . - . ID=gene-AL60_RS28055;Name=AL60_RS28055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28055;partial=true;pseudo=true;start_range=.,364595 NZ_KK316846.1 Protein Homology CDS 364595 364689 . - 0 ID=cds-AL60_RS28055;Parent=gene-AL60_RS28055;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215127.1;locus_tag=AL60_RS28055;partial=true;product=hypothetical protein;pseudo=true;start_range=.,364595;transl_table=11 NZ_KK316846.1 RefSeq gene 364783 365367 . + . ID=gene-AL60_RS07340;Name=AL60_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07340;old_locus_tag=AL60_00336 NZ_KK316846.1 Protein Homology CDS 364783 365367 . + 0 ID=cds-WP_003403171.1;Parent=gene-AL60_RS07340;Dbxref=GenBank:WP_003403171.1;Name=WP_003403171.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215119.2;locus_tag=AL60_RS07340;product=IS607-like element IS1536 family transposase;protein_id=WP_003403171.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 365369 366079 . + . ID=gene-AL60_RS07345;Name=tnpB;end_range=366079,.;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AL60_RS07345;old_locus_tag=AL60_00337;partial=true;pseudo=true NZ_KK316846.1 Protein Homology CDS 365369 366079 . + 0 ID=cds-AL60_RS07345;Parent=gene-AL60_RS07345;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=366079,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217494.1;locus_tag=AL60_RS07345;partial=true;product=IS607 family element RNA-guided endonuclease TnpB;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 366082 366552 . + . ID=gene-AL60_RS07350;Name=AL60_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07350;old_locus_tag=AL60_00338 NZ_KK316846.1 Protein Homology CDS 366082 366552 . + 0 ID=cds-WP_003898523.1;Parent=gene-AL60_RS07350;Dbxref=GenBank:WP_003898523.1;Name=WP_003898523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898523.1;locus_tag=AL60_RS07350;product=hypothetical protein;protein_id=WP_003898523.1;transl_table=11 NZ_KK316846.1 RefSeq gene 366597 366842 . + . ID=gene-AL60_RS07355;Name=AL60_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07355;old_locus_tag=AL60_00339 NZ_KK316846.1 Protein Homology CDS 366597 366842 . + 0 ID=cds-WP_003403184.1;Parent=gene-AL60_RS07355;Dbxref=GenBank:WP_003403184.1;Name=WP_003403184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215122.1;locus_tag=AL60_RS07355;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003403184.1;transl_table=11 NZ_KK316846.1 RefSeq gene 366839 367240 . + . ID=gene-AL60_RS07360;Name=AL60_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07360;old_locus_tag=AL60_00340 NZ_KK316846.1 Protein Homology CDS 366839 367240 . + 0 ID=cds-WP_003403187.1;Parent=gene-AL60_RS07360;Dbxref=GenBank:WP_003403187.1;Name=WP_003403187.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215123.1;locus_tag=AL60_RS07360;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403187.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 367246 367410 . + . ID=gene-AL60_RS27400;Name=AL60_RS27400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27400;old_locus_tag=AL60_00341;partial=true;pseudo=true;start_range=.,367246 NZ_KK316846.1 Protein Homology CDS 367246 367410 . + 0 ID=cds-AL60_RS27400;Parent=gene-AL60_RS27400;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292309.1;locus_tag=AL60_RS27400;partial=true;product=hypothetical protein;pseudo=true;start_range=.,367246;transl_table=11 NZ_KK316846.1 RefSeq gene 367628 367795 . - . ID=gene-AL60_RS27865;Name=AL60_RS27865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27865 NZ_KK316846.1 Protein Homology CDS 367628 367795 . - 0 ID=cds-WP_077385191.1;Parent=gene-AL60_RS27865;Dbxref=GenBank:WP_077385191.1;Name=WP_077385191.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.6;locus_tag=AL60_RS27865;product=DUF3800 domain-containing protein;protein_id=WP_077385191.1;transl_table=11 NZ_KK316846.1 RefSeq gene 367819 368112 . + . ID=gene-AL60_RS27870;Name=AL60_RS27870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27870 NZ_KK316846.1 Protein Homology CDS 367819 368112 . + 0 ID=cds-WP_016719609.1;Parent=gene-AL60_RS27870;Dbxref=GenBank:WP_016719609.1;Name=WP_016719609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719609.1;locus_tag=AL60_RS27870;product=hypothetical protein;protein_id=WP_016719609.1;transl_table=11 NZ_KK316846.1 RefSeq gene 368105 369262 . - . ID=gene-AL60_RS07370;Name=AL60_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07370;old_locus_tag=AL60_00342 NZ_KK316846.1 Protein Homology CDS 368105 369262 . - 0 ID=cds-WP_003898524.1;Parent=gene-AL60_RS07370;Dbxref=GenBank:WP_003898524.1;Name=WP_003898524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215124.1;locus_tag=AL60_RS07370;product=hypothetical protein;protein_id=WP_003898524.1;transl_table=11 NZ_KK316846.1 RefSeq gene 369314 369535 . - . ID=gene-AL60_RS0104140;Name=AL60_RS0104140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104140 NZ_KK316846.1 Protein Homology CDS 369314 369535 . - 0 ID=cds-WP_003898525.1;Parent=gene-AL60_RS0104140;Dbxref=GenBank:WP_003898525.1;Name=WP_003898525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215125.2;locus_tag=AL60_RS0104140;product=DUF4926 domain-containing protein;protein_id=WP_003898525.1;transl_table=11 NZ_KK316846.1 RefSeq gene 369677 370282 . + . ID=gene-AL60_RS07375;Name=AL60_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07375;old_locus_tag=AL60_00344 NZ_KK316846.1 Protein Homology CDS 369677 370282 . + 0 ID=cds-WP_003898526.1;Parent=gene-AL60_RS07375;Dbxref=GenBank:WP_003898526.1;Name=WP_003898526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215126.1;locus_tag=AL60_RS07375;product=hypothetical protein;protein_id=WP_003898526.1;transl_table=11 NZ_KK316846.1 RefSeq gene 370301 372868 . - . ID=gene-AL60_RS07380;Name=AL60_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07380;old_locus_tag=AL60_00345 NZ_KK316846.1 Protein Homology CDS 370301 372868 . - 0 ID=cds-WP_009937370.1;Parent=gene-AL60_RS07380;Dbxref=GenBank:WP_009937370.1;Name=WP_009937370.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215127.1;locus_tag=AL60_RS07380;product=SEC-C metal-binding domain-containing protein;protein_id=WP_009937370.1;transl_table=11 NZ_KK316846.1 RefSeq gene 372952 373701 . + . ID=gene-AL60_RS0104145;Name=AL60_RS0104145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104145;old_locus_tag=AL60_00346 NZ_KK316846.1 Protein Homology CDS 372952 373701 . + 0 ID=cds-WP_003898528.1;Parent=gene-AL60_RS0104145;Dbxref=GenBank:WP_003898528.1;Name=WP_003898528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215128.2;locus_tag=AL60_RS0104145;product=hypothetical protein;protein_id=WP_003898528.1;transl_table=11 NZ_KK316846.1 RefSeq gene 373698 373940 . + . ID=gene-AL60_RS07385;Name=AL60_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07385;old_locus_tag=AL60_00347 NZ_KK316846.1 Protein Homology CDS 373698 373940 . + 0 ID=cds-WP_003403210.1;Parent=gene-AL60_RS07385;Dbxref=GenBank:WP_003403210.1;Name=WP_003403210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215129.1;locus_tag=AL60_RS07385;product=hypothetical protein;protein_id=WP_003403210.1;transl_table=11 NZ_KK316846.1 RefSeq gene 373937 374203 . - . ID=gene-AL60_RS27875;Name=AL60_RS27875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27875;old_locus_tag=AL60_00348 NZ_KK316846.1 Protein Homology CDS 373937 374203 . - 0 ID=cds-WP_003898530.1;Parent=gene-AL60_RS27875;Dbxref=GenBank:WP_003898530.1;Name=WP_003898530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898530.1;locus_tag=AL60_RS27875;product=hypothetical protein;protein_id=WP_003898530.1;transl_table=11 NZ_KK316846.1 RefSeq gene 374135 374362 . + . ID=gene-AL60_RS07395;Name=AL60_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07395;old_locus_tag=AL60_00349 NZ_KK316846.1 Protein Homology CDS 374135 374362 . + 0 ID=cds-WP_003403213.1;Parent=gene-AL60_RS07395;Dbxref=GenBank:WP_003403213.1;Name=WP_003403213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409270.1;locus_tag=AL60_RS07395;product=antitoxin VapB29;protein_id=WP_003403213.1;transl_table=11 NZ_KK316846.1 RefSeq gene 374359 374760 . + . ID=gene-AL60_RS07400;Name=vapC29;gbkey=Gene;gene=vapC29;gene_biotype=protein_coding;locus_tag=AL60_RS07400;old_locus_tag=AL60_00350 NZ_KK316846.1 Protein Homology CDS 374359 374760 . + 0 ID=cds-WP_003403218.1;Parent=gene-AL60_RS07400;Dbxref=GenBank:WP_003403218.1;Name=WP_003403218.1;gbkey=CDS;gene=vapC29;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215131.1;locus_tag=AL60_RS07400;product=type II toxin-antitoxin system ribonuclease VapC29;protein_id=WP_003403218.1;transl_table=11 NZ_KK316846.1 RefSeq gene 374991 375584 . + . ID=gene-AL60_RS28060;Name=AL60_RS28060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28060;old_locus_tag=AL60_00351 NZ_KK316846.1 Protein Homology CDS 374991 375584 . + 0 ID=cds-WP_015629632.1;Parent=gene-AL60_RS28060;Dbxref=GenBank:WP_015629632.1;Name=WP_015629632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015629632.1;locus_tag=AL60_RS28060;product=HIT family protein;protein_id=WP_015629632.1;transl_table=11 NZ_KK316846.1 RefSeq gene 375602 376072 . + . ID=gene-AL60_RS28065;Name=AL60_RS28065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28065;old_locus_tag=AL60_00352 NZ_KK316846.1 Protein Homology CDS 375602 376072 . + 0 ID=cds-WP_003906402.1;Parent=gene-AL60_RS28065;Dbxref=GenBank:WP_003906402.1;Name=WP_003906402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012054156.1;locus_tag=AL60_RS28065;product=HIT family protein;protein_id=WP_003906402.1;transl_table=11 NZ_KK316846.1 RefSeq gene 376069 377160 . + . ID=gene-AL60_RS07405;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=AL60_RS07405;old_locus_tag=AL60_00353 NZ_KK316846.1 Protein Homology CDS 376069 377160 . + 0 ID=cds-WP_012054241.1;Parent=gene-AL60_RS07405;Dbxref=GenBank:WP_012054241.1;Name=WP_012054241.1;gbkey=CDS;gene=galK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215134.1;locus_tag=AL60_RS07405;product=galactokinase;protein_id=WP_012054241.1;transl_table=11 NZ_KK316846.1 RefSeq gene 377555 378619 . + . ID=gene-AL60_RS07410;Name=AL60_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07410;old_locus_tag=AL60_00354 NZ_KK316846.1 Protein Homology CDS 377555 378619 . + 0 ID=cds-WP_003898532.1;Parent=gene-AL60_RS07410;Dbxref=GenBank:WP_003898532.1;Name=WP_003898532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215135.1;locus_tag=AL60_RS07410;product=zinc ribbon domain-containing protein;protein_id=WP_003898532.1;transl_table=11 NZ_KK316846.1 RefSeq gene 378723 379670 . + . ID=gene-AL60_RS07415;Name=AL60_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07415;old_locus_tag=AL60_00355 NZ_KK316846.1 Protein Homology CDS 378723 379670 . + 0 ID=cds-WP_003403232.1;Parent=gene-AL60_RS07415;Dbxref=GenBank:WP_003403232.1;Name=WP_003403232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215136.2;locus_tag=AL60_RS07415;product=DUF732 domain-containing protein;protein_id=WP_003403232.1;transl_table=11 NZ_KK316846.1 RefSeq gene 379763 380017 . + . ID=gene-AL60_RS07420;Name=vapB30;gbkey=Gene;gene=vapB30;gene_biotype=protein_coding;locus_tag=AL60_RS07420;old_locus_tag=AL60_00356 NZ_KK316846.1 Protein Homology CDS 379763 380017 . + 0 ID=cds-WP_003403235.1;Parent=gene-AL60_RS07420;Dbxref=GenBank:WP_003403235.1;Name=WP_003403235.1;gbkey=CDS;gene=vapB30;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215137.1;locus_tag=AL60_RS07420;product=type II toxin-antitoxin system antitoxin VapB30;protein_id=WP_003403235.1;transl_table=11 NZ_KK316846.1 RefSeq gene 380017 380412 . + . ID=gene-AL60_RS07425;Name=vapC30;gbkey=Gene;gene=vapC30;gene_biotype=protein_coding;locus_tag=AL60_RS07425;old_locus_tag=AL60_00357 NZ_KK316846.1 Protein Homology CDS 380017 380412 . + 0 ID=cds-WP_003403236.1;Parent=gene-AL60_RS07425;Dbxref=GenBank:WP_003403236.1;Name=WP_003403236.1;gbkey=CDS;gene=vapC30;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215138.1;locus_tag=AL60_RS07425;product=type II toxin-antitoxin system toxin ribonuclease C30;protein_id=WP_003403236.1;transl_table=11 NZ_KK316846.1 RefSeq gene 380506 381246 . - . ID=gene-AL60_RS07430;Name=AL60_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07430;old_locus_tag=AL60_00358 NZ_KK316846.1 Protein Homology CDS 380506 381246 . - 0 ID=cds-WP_003403239.1;Parent=gene-AL60_RS07430;Dbxref=GenBank:WP_003403239.1;Name=WP_003403239.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215139.1;locus_tag=AL60_RS07430;product=TVP38/TMEM64 family protein;protein_id=WP_003403239.1;transl_table=11 NZ_KK316846.1 RefSeq gene 381378 381638 . + . ID=gene-AL60_RS07435;Name=AL60_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07435;old_locus_tag=AL60_00359 NZ_KK316846.1 Protein Homology CDS 381378 381638 . + 0 ID=cds-WP_003403244.1;Parent=gene-AL60_RS07435;Dbxref=GenBank:WP_003403244.1;Name=WP_003403244.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215140.1;locus_tag=AL60_RS07435;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003403244.1;transl_table=11 NZ_KK316846.1 RefSeq gene 381635 382042 . + . ID=gene-AL60_RS07440;Name=AL60_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07440;old_locus_tag=AL60_00360 NZ_KK316846.1 Protein Homology CDS 381635 382042 . + 0 ID=cds-WP_003403246.1;Parent=gene-AL60_RS07440;Dbxref=GenBank:WP_003403246.1;Name=WP_003403246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215141.1;locus_tag=AL60_RS07440;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403246.1;transl_table=11 NZ_KK316846.1 RefSeq gene 382114 383265 . - . ID=gene-AL60_RS07445;Name=AL60_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07445;old_locus_tag=AL60_00361 NZ_KK316846.1 Protein Homology CDS 382114 383265 . - 0 ID=cds-WP_003403248.1;Parent=gene-AL60_RS07445;Dbxref=GenBank:WP_003403248.1;Name=WP_003403248.1;Ontology_term=GO:0007165;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215142.1;locus_tag=AL60_RS07445;product=FIST signal transduction protein;protein_id=WP_003403248.1;transl_table=11 NZ_KK316846.1 RefSeq gene 383358 385085 . - . ID=gene-AL60_RS07450;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AL60_RS07450;old_locus_tag=AL60_00362 NZ_KK316846.1 Protein Homology CDS 383358 385085 . - 0 ID=cds-WP_003900979.1;Parent=gene-AL60_RS07450;Dbxref=GenBank:WP_003900979.1;Name=WP_003900979.1;Ontology_term=GO:0006281,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215143.1;locus_tag=AL60_RS07450;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_003900979.1;transl_table=11 NZ_KK316846.1 RefSeq gene 385082 388366 . - . ID=gene-AL60_RS07455;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AL60_RS07455;old_locus_tag=AL60_00363 NZ_KK316846.1 Protein Homology CDS 385082 388366 . - 0 ID=cds-WP_003905355.1;Parent=gene-AL60_RS07455;Dbxref=GenBank:WP_003905355.1;Name=WP_003905355.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215144.1;locus_tag=AL60_RS07455;product=exodeoxyribonuclease V subunit beta;protein_id=WP_003905355.1;transl_table=11 NZ_KK316846.1 RefSeq gene 388366 391659 . - . ID=gene-AL60_RS07460;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AL60_RS07460;old_locus_tag=AL60_00364 NZ_KK316846.1 Protein Homology CDS 388366 391659 . - 0 ID=cds-WP_003906406.1;Parent=gene-AL60_RS07460;Dbxref=GenBank:WP_003906406.1;Name=WP_003906406.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215145.1;locus_tag=AL60_RS07460;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_003906406.1;transl_table=11 NZ_KK316846.1 RefSeq gene 391936 392631 . - . ID=gene-AL60_RS07465;Name=AL60_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07465;old_locus_tag=AL60_00365 NZ_KK316846.1 Protein Homology CDS 391936 392631 . - 0 ID=cds-WP_003403259.1;Parent=gene-AL60_RS07465;Dbxref=GenBank:WP_003403259.1;Name=WP_003403259.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215146.1;locus_tag=AL60_RS07465;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003403259.1;transl_table=11 NZ_KK316846.1 RefSeq gene 392680 393519 . - . ID=gene-AL60_RS07470;Name=AL60_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07470;old_locus_tag=AL60_00366 NZ_KK316846.1 Protein Homology CDS 392680 393519 . - 0 ID=cds-WP_003403262.1;Parent=gene-AL60_RS07470;Dbxref=GenBank:WP_003403262.1;Name=WP_003403262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215147.1;locus_tag=AL60_RS07470;product=hypothetical protein;protein_id=WP_003403262.1;transl_table=11 NZ_KK316846.1 RefSeq gene 393673 394386 . - . ID=gene-AL60_RS07475;Name=AL60_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07475;old_locus_tag=AL60_00367 NZ_KK316846.1 Protein Homology CDS 393673 394386 . - 0 ID=cds-WP_003403266.1;Parent=gene-AL60_RS07475;Dbxref=GenBank:WP_003403266.1;Name=WP_003403266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215148.1;locus_tag=AL60_RS07475;product=MBL fold metallo-hydrolase;protein_id=WP_003403266.1;transl_table=11 NZ_KK316846.1 RefSeq gene 394505 394717 . + . ID=gene-AL60_RS07480;Name=AL60_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07480;old_locus_tag=AL60_00368 NZ_KK316846.1 Protein Homology CDS 394505 394717 . + 0 ID=cds-WP_003898537.1;Parent=gene-AL60_RS07480;Dbxref=GenBank:WP_003898537.1;Name=WP_003898537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287878.1;locus_tag=AL60_RS07480;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003898537.1;transl_table=11 NZ_KK316846.1 RefSeq gene 394847 394919 . + . ID=gene-AL60_RS07485;Name=AL60_RS07485;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS07485;old_locus_tag=AL60_00369 NZ_KK316846.1 tRNAscan-SE tRNA 394847 394919 . + . ID=rna-AL60_RS07485;Parent=gene-AL60_RS07485;anticodon=(pos:394880..394882);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS07485;product=tRNA-Thr NZ_KK316846.1 tRNAscan-SE exon 394847 394919 . + . ID=exon-AL60_RS07485-1;Parent=rna-AL60_RS07485;anticodon=(pos:394880..394882);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS07485;product=tRNA-Thr NZ_KK316846.1 RefSeq gene 394956 395029 . + . ID=gene-AL60_RS07490;Name=AL60_RS07490;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS07490;old_locus_tag=AL60_00370 NZ_KK316846.1 tRNAscan-SE tRNA 394956 395029 . + . ID=rna-AL60_RS07490;Parent=gene-AL60_RS07490;anticodon=(pos:394990..394992);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS07490;product=tRNA-Met NZ_KK316846.1 tRNAscan-SE exon 394956 395029 . + . ID=exon-AL60_RS07490-1;Parent=rna-AL60_RS07490;anticodon=(pos:394990..394992);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS07490;product=tRNA-Met NZ_KK316846.1 RefSeq gene 395065 395232 . + . ID=gene-AL60_RS07495;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AL60_RS07495;old_locus_tag=AL60_00371 NZ_KK316846.1 Protein Homology CDS 395065 395232 . + 0 ID=cds-WP_003898538.1;Parent=gene-AL60_RS07495;Dbxref=GenBank:WP_003898538.1;Name=WP_003898538.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177630.1;locus_tag=AL60_RS07495;product=50S ribosomal protein L33;protein_id=WP_003898538.1;transl_table=11 NZ_KK316846.1 RefSeq gene 395283 395759 . + . ID=gene-AL60_RS07500;Name=hadA;gbkey=Gene;gene=hadA;gene_biotype=protein_coding;locus_tag=AL60_RS07500;old_locus_tag=AL60_00372 NZ_KK316846.1 Protein Homology CDS 395283 395759 . + 0 ID=cds-WP_003403277.1;Parent=gene-AL60_RS07500;Dbxref=GenBank:WP_003403277.1;Name=WP_003403277.1;gbkey=CDS;gene=hadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215149.1;locus_tag=AL60_RS07500;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadA;protein_id=WP_003403277.1;transl_table=11 NZ_KK316846.1 RefSeq gene 395746 396174 . + . ID=gene-AL60_RS07505;Name=hadB;gbkey=Gene;gene=hadB;gene_biotype=protein_coding;locus_tag=AL60_RS07505;old_locus_tag=AL60_00373 NZ_KK316846.1 Protein Homology CDS 395746 396174 . + 0 ID=cds-WP_003903106.1;Parent=gene-AL60_RS07505;Dbxref=GenBank:WP_003903106.1;Name=WP_003903106.1;Ontology_term=GO:0071768;gbkey=CDS;gene=hadB;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215150.1;locus_tag=AL60_RS07505;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadB;protein_id=WP_003903106.1;transl_table=11 NZ_KK316846.1 RefSeq gene 396178 396678 . + . ID=gene-AL60_RS07510;Name=hadC;gbkey=Gene;gene=hadC;gene_biotype=protein_coding;locus_tag=AL60_RS07510;old_locus_tag=AL60_00374 NZ_KK316846.1 Protein Homology CDS 396178 396678 . + 0 ID=cds-WP_003403282.1;Parent=gene-AL60_RS07510;Dbxref=GenBank:WP_003403282.1;Name=WP_003403282.1;gbkey=CDS;gene=hadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215151.1;locus_tag=AL60_RS07510;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadC;protein_id=WP_003403282.1;transl_table=11 NZ_KK316846.1 RefSeq gene 396877 396949 . + . ID=gene-AL60_RS07515;Name=AL60_RS07515;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS07515;old_locus_tag=AL60_00375 NZ_KK316846.1 tRNAscan-SE tRNA 396877 396949 . + . ID=rna-AL60_RS07515;Parent=gene-AL60_RS07515;anticodon=(pos:396910..396912);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS07515;product=tRNA-Trp NZ_KK316846.1 tRNAscan-SE exon 396877 396949 . + . ID=exon-AL60_RS07515-1;Parent=rna-AL60_RS07515;anticodon=(pos:396910..396912);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS07515;product=tRNA-Trp NZ_KK316846.1 RefSeq gene 397090 397575 . + . ID=gene-AL60_RS07520;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AL60_RS07520;old_locus_tag=AL60_00376 NZ_KK316846.1 Protein Homology CDS 397090 397575 . + 0 ID=cds-WP_003403284.1;Parent=gene-AL60_RS07520;Dbxref=GenBank:WP_003403284.1;Name=WP_003403284.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177743.1;locus_tag=AL60_RS07520;product=preprotein translocase subunit SecE;protein_id=WP_003403284.1;transl_table=11 NZ_KK316846.1 RefSeq gene 397607 398323 . + . ID=gene-AL60_RS07525;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AL60_RS07525;old_locus_tag=AL60_00377 NZ_KK316846.1 Protein Homology CDS 397607 398323 . + 0 ID=cds-WP_003403288.1;Parent=gene-AL60_RS07525;Dbxref=GenBank:WP_003403288.1;Name=WP_003403288.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215153.1;locus_tag=AL60_RS07525;product=transcription termination/antitermination protein NusG;protein_id=WP_003403288.1;transl_table=11 NZ_KK316846.1 RefSeq gene 398375 398803 . + . ID=gene-AL60_RS07530;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AL60_RS07530;old_locus_tag=AL60_00378 NZ_KK316846.1 Protein Homology CDS 398375 398803 . + 0 ID=cds-WP_003403291.1;Parent=gene-AL60_RS07530;Dbxref=GenBank:WP_003403291.1;Name=WP_003403291.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215154.1;locus_tag=AL60_RS07530;product=50S ribosomal protein L11;protein_id=WP_003403291.1;transl_table=11 NZ_KK316846.1 RefSeq gene 398870 399577 . + . ID=gene-AL60_RS07535;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AL60_RS07535;old_locus_tag=AL60_00379 NZ_KK316846.1 Protein Homology CDS 398870 399577 . + 0 ID=cds-WP_003403292.1;Parent=gene-AL60_RS07535;Dbxref=GenBank:WP_003403292.1;Name=WP_003403292.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215155.1;locus_tag=AL60_RS07535;product=50S ribosomal protein L1;protein_id=WP_003403292.1;transl_table=11 NZ_KK316846.1 RefSeq gene 399651 400556 . - . ID=gene-AL60_RS07540;Name=mmaA4;gbkey=Gene;gene=mmaA4;gene_biotype=protein_coding;locus_tag=AL60_RS07540;old_locus_tag=AL60_00380 NZ_KK316846.1 Protein Homology CDS 399651 400556 . - 0 ID=cds-WP_003900195.1;Parent=gene-AL60_RS07540;Dbxref=GenBank:WP_003900195.1;Name=WP_003900195.1;gbkey=CDS;gene=mmaA4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215156.1;locus_tag=AL60_RS07540;product=hydroxymycolate synthase MmaA4;protein_id=WP_003900195.1;transl_table=11 NZ_KK316846.1 RefSeq gene 400621 401502 . - . ID=gene-AL60_RS07545;Name=mmaA3;gbkey=Gene;gene=mmaA3;gene_biotype=protein_coding;locus_tag=AL60_RS07545;old_locus_tag=AL60_00381 NZ_KK316846.1 Protein Homology CDS 400621 401502 . - 0 ID=cds-WP_003403302.1;Parent=gene-AL60_RS07545;Dbxref=GenBank:WP_003403302.1;Name=WP_003403302.1;gbkey=CDS;gene=mmaA3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215157.1;locus_tag=AL60_RS07545;product=methoxy mycolic acid synthase MmaA3;protein_id=WP_003403302.1;transl_table=11 NZ_KK316846.1 RefSeq gene 401650 402513 . - . ID=gene-AL60_RS07550;Name=mmaA2;gbkey=Gene;gene=mmaA2;gene_biotype=protein_coding;locus_tag=AL60_RS07550;old_locus_tag=AL60_00382 NZ_KK316846.1 Protein Homology CDS 401650 402513 . - 0 ID=cds-WP_003900985.1;Parent=gene-AL60_RS07550;Dbxref=GenBank:WP_003900985.1;Name=WP_003900985.1;gbkey=CDS;gene=mmaA2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215158.1;locus_tag=AL60_RS07550;product=cyclopropane mycolic acid synthase MmaA2;protein_id=WP_003900985.1;transl_table=11 NZ_KK316846.1 RefSeq gene 402680 403540 . - . ID=gene-AL60_RS07555;Name=mmaA1;gbkey=Gene;gene=mmaA1;gene_biotype=protein_coding;locus_tag=AL60_RS07555;old_locus_tag=AL60_00383 NZ_KK316846.1 Protein Homology CDS 402680 403540 . - 0 ID=cds-WP_003403310.1;Parent=gene-AL60_RS07555;Dbxref=GenBank:WP_003403310.1;Name=WP_003403310.1;gbkey=CDS;gene=mmaA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215159.1;locus_tag=AL60_RS07555;product=mycolic acid methyltransferase MmaA1;protein_id=WP_003403310.1;transl_table=11 NZ_KK316846.1 RefSeq gene 403587 404492 . - . ID=gene-AL60_RS07560;Name=lipG;gbkey=Gene;gene=lipG;gene_biotype=protein_coding;locus_tag=AL60_RS07560;old_locus_tag=AL60_00384 NZ_KK316846.1 Protein Homology CDS 403587 404492 . - 0 ID=cds-WP_003403314.1;Parent=gene-AL60_RS07560;Dbxref=GenBank:WP_003403314.1;Name=WP_003403314.1;gbkey=CDS;gene=lipG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215160.1;locus_tag=AL60_RS07560;product=lipase/esterase LipG;protein_id=WP_003403314.1;transl_table=11 NZ_KK316846.1 RefSeq gene 404504 405850 . - . ID=gene-AL60_RS07565;Name=AL60_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07565;old_locus_tag=AL60_00385 NZ_KK316846.1 Protein Homology CDS 404504 405850 . - 0 ID=cds-WP_003904450.1;Parent=gene-AL60_RS07565;Dbxref=GenBank:WP_003904450.1;Name=WP_003904450.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292344.1;locus_tag=AL60_RS07565;product=ABC1 kinase family protein;protein_id=WP_003904450.1;transl_table=11 NZ_KK316846.1 RefSeq gene 406056 410252 . + . ID=gene-AL60_RS07570;Name=AL60_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07570;old_locus_tag=AL60_00386 NZ_KK316846.1 Protein Homology CDS 406056 410252 . + 0 ID=cds-WP_003917325.1;Parent=gene-AL60_RS07570;Dbxref=GenBank:WP_003917325.1;Name=WP_003917325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013988757.1;locus_tag=AL60_RS07570;product=glycoside hydrolase family 38 N-terminal domain-containing protein;protein_id=WP_003917325.1;transl_table=11 NZ_KK316846.1 RefSeq gene 410249 410923 . + . ID=gene-AL60_RS07575;Name=AL60_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07575;old_locus_tag=AL60_00387 NZ_KK316846.1 Protein Homology CDS 410249 410923 . + 0 ID=cds-WP_003403326.1;Parent=gene-AL60_RS07575;Dbxref=GenBank:WP_003403326.1;Name=WP_003403326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177744.1;locus_tag=AL60_RS07575;product=DUF7158 domain-containing protein;protein_id=WP_003403326.1;transl_table=11 NZ_KK316846.1 RefSeq gene 410923 411831 . + . ID=gene-AL60_RS07580;Name=AL60_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07580;old_locus_tag=AL60_00388 NZ_KK316846.1 Protein Homology CDS 410923 411831 . + 0 ID=cds-WP_003403330.1;Parent=gene-AL60_RS07580;Dbxref=GenBank:WP_003403330.1;Name=WP_003403330.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215164.1;locus_tag=AL60_RS07580;product=ROK family protein;protein_id=WP_003403330.1;transl_table=11 NZ_KK316846.1 RefSeq gene 412162 412698 . + . ID=gene-AL60_RS07585;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AL60_RS07585;old_locus_tag=AL60_00389 NZ_KK316846.1 Protein Homology CDS 412162 412698 . + 0 ID=cds-WP_003403341.1;Parent=gene-AL60_RS07585;Dbxref=GenBank:WP_003403341.1;Name=WP_003403341.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215165.1;locus_tag=AL60_RS07585;product=50S ribosomal protein L10;protein_id=WP_003403341.1;transl_table=11 NZ_KK316846.1 RefSeq gene 412735 413127 . + . ID=gene-AL60_RS07590;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AL60_RS07590;old_locus_tag=AL60_00390 NZ_KK316846.1 Protein Homology CDS 412735 413127 . + 0 ID=cds-WP_003403353.1;Parent=gene-AL60_RS07590;Dbxref=GenBank:WP_003403353.1;Name=WP_003403353.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215166.1;locus_tag=AL60_RS07590;product=50S ribosomal protein L7/L12;protein_id=WP_003403353.1;transl_table=11 NZ_KK316846.1 RefSeq gene 413120 413815 . - . ID=gene-AL60_RS07595;Name=AL60_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07595;old_locus_tag=AL60_00391 NZ_KK316846.1 Protein Homology CDS 413120 413815 . - 0 ID=cds-WP_003403355.1;Parent=gene-AL60_RS07595;Dbxref=GenBank:WP_003403355.1;Name=WP_003403355.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215167.1;locus_tag=AL60_RS07595;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403355.1;transl_table=11 NZ_KK316846.1 RefSeq gene 413886 415391 . + . ID=gene-AL60_RS07600;Name=AL60_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07600;old_locus_tag=AL60_00392 NZ_KK316846.1 Protein Homology CDS 413886 415391 . + 0 ID=cds-WP_003403360.1;Parent=gene-AL60_RS07600;Dbxref=GenBank:WP_003403360.1;Name=WP_003403360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215168.1;locus_tag=AL60_RS07600;product=carotenoid cleavage oxygenase;protein_id=WP_003403360.1;transl_table=11 NZ_KK316846.1 RefSeq gene 415472 416482 . + . ID=gene-AL60_RS07605;Name=mkl;gbkey=Gene;gene=mkl;gene_biotype=protein_coding;locus_tag=AL60_RS07605;old_locus_tag=AL60_00393 NZ_KK316846.1 Protein Homology CDS 415472 416482 . + 0 ID=cds-WP_009937374.1;Parent=gene-AL60_RS07605;Dbxref=GenBank:WP_009937374.1;Name=WP_009937374.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=mkl;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911248.1;locus_tag=AL60_RS07605;product=ABC transporter ATP-binding protein;protein_id=WP_009937374.1;transl_table=11 NZ_KK316846.1 RefSeq gene 416870 417253 . - . ID=gene-AL60_RS07610;Name=AL60_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07610;old_locus_tag=AL60_00394 NZ_KK316846.1 Protein Homology CDS 416870 417253 . - 0 ID=cds-WP_003403365.1;Parent=gene-AL60_RS07610;Dbxref=GenBank:WP_003403365.1;Name=WP_003403365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215170.1;locus_tag=AL60_RS07610;product=ribonuclease VapC6;protein_id=WP_003403365.1;transl_table=11 NZ_KK316846.1 RefSeq gene 417348 417503 . - . ID=gene-AL60_RS07615;Name=AL60_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07615;old_locus_tag=AL60_00395 NZ_KK316846.1 Protein Homology CDS 417348 417503 . - 0 ID=cds-WP_003403368.1;Parent=gene-AL60_RS07615;Dbxref=GenBank:WP_003403368.1;Name=WP_003403368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215171.1;locus_tag=AL60_RS07615;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003403368.1;transl_table=11 NZ_KK316846.1 RefSeq gene 417579 418295 . - . ID=gene-AL60_RS07620;Name=AL60_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07620;old_locus_tag=AL60_00396 NZ_KK316846.1 Protein Homology CDS 417579 418295 . - 0 ID=cds-WP_003403371.1;Parent=gene-AL60_RS07620;Dbxref=GenBank:WP_003403371.1;Name=WP_003403371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215172.1;locus_tag=AL60_RS07620;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_003403371.1;transl_table=11 NZ_KK316846.1 RefSeq gene 418571 418879 . - . ID=gene-AL60_RS07625;Name=AL60_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07625;old_locus_tag=AL60_00397 NZ_KK316846.1 Protein Homology CDS 418571 418879 . - 0 ID=cds-WP_003403376.1;Parent=gene-AL60_RS07625;Dbxref=GenBank:WP_003403376.1;Name=WP_003403376.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215173.1;locus_tag=AL60_RS07625;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_003403376.1;transl_table=11 NZ_KK316846.1 RefSeq gene 418866 419111 . - . ID=gene-AL60_RS07630;Name=AL60_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07630;old_locus_tag=AL60_00398 NZ_KK316846.1 Protein Homology CDS 418866 419111 . - 0 ID=cds-WP_003403381.1;Parent=gene-AL60_RS07630;Dbxref=GenBank:WP_003403381.1;Name=WP_003403381.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215174.1;locus_tag=AL60_RS07630;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003403381.1;transl_table=11 NZ_KK316846.1 RefSeq gene 419221 419658 . - . ID=gene-AL60_RS07635;Name=AL60_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07635;old_locus_tag=AL60_00399 NZ_KK316846.1 Protein Homology CDS 419221 419658 . - 0 ID=cds-WP_003403386.1;Parent=gene-AL60_RS07635;Dbxref=GenBank:WP_003403386.1;Name=WP_003403386.1;Ontology_term=GO:0004540,GO:0046872,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215175.1;locus_tag=AL60_RS07635;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403386.1;transl_table=11 NZ_KK316846.1 RefSeq gene 419655 419909 . - . ID=gene-AL60_RS0104170;Name=AL60_RS0104170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104170;old_locus_tag=AL60_00400 NZ_KK316846.1 Protein Homology CDS 419655 419909 . - 0 ID=cds-WP_003911263.1;Parent=gene-AL60_RS0104170;Dbxref=GenBank:WP_003911263.1;Name=WP_003911263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215176.2;locus_tag=AL60_RS0104170;product=antitoxin VapB7;protein_id=WP_003911263.1;transl_table=11 NZ_KK316846.1 RefSeq gene 420023 422386 . + . ID=gene-AL60_RS07640;Name=atsD;gbkey=Gene;gene=atsD;gene_biotype=protein_coding;locus_tag=AL60_RS07640;old_locus_tag=AL60_00401 NZ_KK316846.1 Protein Homology CDS 420023 422386 . + 0 ID=cds-WP_003898547.1;Parent=gene-AL60_RS07640;Dbxref=GenBank:WP_003898547.1;Name=WP_003898547.1;gbkey=CDS;gene=atsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215177.1;locus_tag=AL60_RS07640;product=arylsulfatase AtsD;protein_id=WP_003898547.1;transl_table=11 NZ_KK316846.1 RefSeq gene 422449 422775 . + . ID=gene-AL60_RS07645;Name=AL60_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07645;old_locus_tag=AL60_00402 NZ_KK316846.1 Protein Homology CDS 422449 422775 . + 0 ID=cds-WP_003403401.1;Parent=gene-AL60_RS07645;Dbxref=GenBank:WP_003403401.1;Name=WP_003403401.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: protein motif:HMM:TIGR01552.1;locus_tag=AL60_RS07645;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003403401.1;transl_table=11 NZ_KK316846.1 RefSeq gene 422687 423025 . + . ID=gene-AL60_RS07650;Name=AL60_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07650;old_locus_tag=AL60_00403 NZ_KK316846.1 Protein Homology CDS 422687 423025 . + 0 ID=cds-WP_003403405.1;Parent=gene-AL60_RS07650;Dbxref=GenBank:WP_003403405.1;Name=WP_003403405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215179.1;locus_tag=AL60_RS07650;product=PIN domain-containing protein;protein_id=WP_003403405.1;transl_table=11 NZ_KK316846.1 RefSeq gene 423022 423195 . + . ID=gene-AL60_RS07655;Name=AL60_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07655;old_locus_tag=AL60_00404 NZ_KK316846.1 Protein Homology CDS 423022 423195 . + 0 ID=cds-WP_003898549.1;Parent=gene-AL60_RS07655;Dbxref=GenBank:WP_003898549.1;Name=WP_003898549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215180.1;locus_tag=AL60_RS07655;product=hypothetical protein;protein_id=WP_003898549.1;transl_table=11 NZ_KK316846.1 RefSeq gene 423693 427211 . + . ID=gene-AL60_RS07660;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AL60_RS07660;old_locus_tag=AL60_00405 NZ_KK316846.1 Protein Homology CDS 423693 427211 . + 0 ID=cds-WP_003900992.1;Parent=gene-AL60_RS07660;Dbxref=GenBank:WP_003900992.1;Name=WP_003900992.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0032549;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,ribonucleoside binding|0032549||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215181.1;locus_tag=AL60_RS07660;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_003900992.1;transl_table=11 NZ_KK316846.1 RefSeq gene 427256 431206 . + . ID=gene-AL60_RS07665;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AL60_RS07665;old_locus_tag=AL60_00406 NZ_KK316846.1 Protein Homology CDS 427256 431206 . + 0 ID=cds-WP_003403413.1;Parent=gene-AL60_RS07665;Dbxref=GenBank:WP_003403413.1;Name=WP_003403413.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003892756.1;locus_tag=AL60_RS07665;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_003403413.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 431283 431583 . + . ID=gene-AL60_RS27880;Name=AL60_RS27880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27880;partial=true;pseudo=true;start_range=.,431283 NZ_KK316846.1 Protein Homology CDS 431283 431583 . + 0 ID=cds-AL60_RS27880;Parent=gene-AL60_RS27880;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585402.1;locus_tag=AL60_RS27880;partial=true;product=amidase family protein;pseudo=true;start_range=.,431283;transl_table=11 NZ_KK316846.1 RefSeq gene 431570 433483 . - . ID=gene-AL60_RS07670;Name=AL60_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07670;old_locus_tag=AL60_00407 NZ_KK316846.1 Protein Homology CDS 431570 433483 . - 0 ID=cds-WP_003900995.1;Parent=gene-AL60_RS07670;Dbxref=GenBank:WP_003900995.1;Name=WP_003900995.1;Ontology_term=GO:0046514,GO:0017040;gbkey=CDS;go_function=N-acylsphingosine amidohydrolase activity|0017040||IEA;go_process=ceramide catabolic process|0046514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215183.1;locus_tag=AL60_RS07670;product=neutral ceramidase;protein_id=WP_003900995.1;transl_table=11 NZ_KK316846.1 RefSeq gene 433678 434436 . + . ID=gene-AL60_RS07675;Name=end;gbkey=Gene;gene=end;gene_biotype=protein_coding;locus_tag=AL60_RS07675;old_locus_tag=AL60_00408 NZ_KK316846.1 Protein Homology CDS 433678 434436 . + 0 ID=cds-WP_003403419.1;Parent=gene-AL60_RS07675;Dbxref=GenBank:WP_003403419.1;Name=WP_003403419.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=end;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215184.1;locus_tag=AL60_RS07675;product=deoxyribonuclease IV;protein_id=WP_003403419.1;transl_table=11 NZ_KK316846.1 RefSeq gene 434468 435310 . + . ID=gene-AL60_RS07680;Name=lpqP;gbkey=Gene;gene=lpqP;gene_biotype=protein_coding;locus_tag=AL60_RS07680;old_locus_tag=AL60_00409 NZ_KK316846.1 Protein Homology CDS 434468 435310 . + 0 ID=cds-WP_003403421.1;Parent=gene-AL60_RS07680;Dbxref=GenBank:WP_003403421.1;Name=WP_003403421.1;Ontology_term=GO:0052689;gbkey=CDS;gene=lpqP;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215185.1;locus_tag=AL60_RS07680;product=CE1 family esterase;protein_id=WP_003403421.1;transl_table=11 NZ_KK316846.1 RefSeq gene 435370 436998 . + . ID=gene-AL60_RS07685;Name=AL60_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07685;old_locus_tag=AL60_00410 NZ_KK316846.1 Protein Homology CDS 435370 436998 . + 0 ID=cds-WP_003403423.1;Parent=gene-AL60_RS07685;Dbxref=GenBank:WP_003403423.1;Name=WP_003403423.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215186.1;locus_tag=AL60_RS07685;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003403423.1;transl_table=11 NZ_KK316846.1 RefSeq gene 437009 437947 . + . ID=gene-AL60_RS07690;Name=AL60_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07690;old_locus_tag=AL60_00411 NZ_KK316846.1 Protein Homology CDS 437009 437947 . + 0 ID=cds-WP_003403426.1;Parent=gene-AL60_RS07690;Dbxref=GenBank:WP_003403426.1;Name=WP_003403426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215187.1;locus_tag=AL60_RS07690;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003403426.1;transl_table=11 NZ_KK316846.1 RefSeq gene 437950 438672 . + . ID=gene-AL60_RS07695;Name=AL60_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07695;old_locus_tag=AL60_00412 NZ_KK316846.1 Protein Homology CDS 437950 438672 . + 0 ID=cds-WP_003403429.1;Parent=gene-AL60_RS07695;Dbxref=GenBank:WP_003403429.1;Name=WP_003403429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215188.1;locus_tag=AL60_RS07695;product=PaaX family transcriptional regulator C-terminal domain-containing protein;protein_id=WP_003403429.1;transl_table=11 NZ_KK316846.1 RefSeq gene 438669 439460 . + . ID=gene-AL60_RS07700;Name=AL60_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07700;old_locus_tag=AL60_00413 NZ_KK316846.1 Protein Homology CDS 438669 439460 . + 0 ID=cds-WP_003403433.1;Parent=gene-AL60_RS07700;Dbxref=GenBank:WP_003403433.1;Name=WP_003403433.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177745.1;locus_tag=AL60_RS07700;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003403433.1;transl_table=11 NZ_KK316846.1 RefSeq gene 439472 442366 . - . ID=gene-AL60_RS07705;Name=mmpL5;gbkey=Gene;gene=mmpL5;gene_biotype=protein_coding;locus_tag=AL60_RS07705;old_locus_tag=AL60_00414 NZ_KK316846.1 Protein Homology CDS 439472 442366 . - 0 ID=cds-WP_003898551.1;Parent=gene-AL60_RS07705;Dbxref=GenBank:WP_003898551.1;Name=WP_003898551.1;gbkey=CDS;gene=mmpL5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215190.1;locus_tag=AL60_RS07705;product=siderophore RND transporter MmpL5;protein_id=WP_003898551.1;transl_table=11 NZ_KK316846.1 RefSeq gene 442363 442791 . - . ID=gene-AL60_RS07710;Name=mmpS5;gbkey=Gene;gene=mmpS5;gene_biotype=protein_coding;locus_tag=AL60_RS07710;old_locus_tag=AL60_00415 NZ_KK316846.1 Protein Homology CDS 442363 442791 . - 0 ID=cds-WP_003403439.1;Parent=gene-AL60_RS07710;Dbxref=GenBank:WP_003403439.1;Name=WP_003403439.1;gbkey=CDS;gene=mmpS5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215191.1;locus_tag=AL60_RS07710;product=siderophore transporter accessory protein MmpS5;protein_id=WP_003403439.1;transl_table=11 NZ_KK316846.1 RefSeq gene 442876 443373 . + . ID=gene-AL60_RS07715;Name=mmpR5;gbkey=Gene;gene=mmpR5;gene_biotype=protein_coding;locus_tag=AL60_RS07715;old_locus_tag=AL60_00416 NZ_KK316846.1 Protein Homology CDS 442876 443373 . + 0 ID=cds-WP_003403442.1;Parent=gene-AL60_RS07715;Dbxref=GenBank:WP_003403442.1;Name=WP_003403442.1;gbkey=CDS;gene=mmpR5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215192.1;locus_tag=AL60_RS07715;product=siderophore transport transcriptional regulator MmpR5;protein_id=WP_003403442.1;transl_table=11 NZ_KK316846.1 RefSeq gene 443429 443926 . - . ID=gene-AL60_RS07720;Name=AL60_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07720;old_locus_tag=AL60_00417 NZ_KK316846.1 Protein Homology CDS 443429 443926 . - 0 ID=cds-WP_003403446.1;Parent=gene-AL60_RS07720;Dbxref=GenBank:WP_003403446.1;Name=WP_003403446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215193.1;locus_tag=AL60_RS07720;product=DUF3060 domain-containing protein;protein_id=WP_003403446.1;transl_table=11 NZ_KK316846.1 RefSeq gene 443928 444302 . - . ID=gene-AL60_RS07725;Name=AL60_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07725;old_locus_tag=AL60_00418 NZ_KK316846.1 Protein Homology CDS 443928 444302 . - 0 ID=cds-WP_003403448.1;Parent=gene-AL60_RS07725;Dbxref=GenBank:WP_003403448.1;Name=WP_003403448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215194.1;locus_tag=AL60_RS07725;product=DUF3060 domain-containing protein;protein_id=WP_003403448.1;transl_table=11 NZ_KK316846.1 RefSeq gene 444607 445197 . + . ID=gene-AL60_RS07730;Name=AL60_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07730;old_locus_tag=AL60_00419 NZ_KK316846.1 Protein Homology CDS 444607 445197 . + 0 ID=cds-WP_003403451.1;Parent=gene-AL60_RS07730;Dbxref=GenBank:WP_003403451.1;Name=WP_003403451.1;Ontology_term=GO:0006355,GO:0045892,GO:0046677,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215195.1;locus_tag=AL60_RS07730;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403451.1;transl_table=11 NZ_KK316846.1 RefSeq gene 445446 445820 . + . ID=gene-AL60_RS07735;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AL60_RS07735;old_locus_tag=AL60_00420 NZ_KK316846.1 Protein Homology CDS 445446 445820 . + 0 ID=cds-WP_003403453.1;Parent=gene-AL60_RS07735;Dbxref=GenBank:WP_003403453.1;Name=WP_003403453.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215196.1;locus_tag=AL60_RS07735;product=30S ribosomal protein S12;protein_id=WP_003403453.1;transl_table=11 NZ_KK316846.1 RefSeq gene 445820 446290 . + . ID=gene-AL60_RS07740;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AL60_RS07740;old_locus_tag=AL60_00421 NZ_KK316846.1 Protein Homology CDS 445820 446290 . + 0 ID=cds-WP_003403456.1;Parent=gene-AL60_RS07740;Dbxref=GenBank:WP_003403456.1;Name=WP_003403456.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012084986.1;locus_tag=AL60_RS07740;product=30S ribosomal protein S7;protein_id=WP_003403456.1;transl_table=11 NZ_KK316846.1 RefSeq gene 446371 448476 . + . ID=gene-AL60_RS07745;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AL60_RS07745;old_locus_tag=AL60_00422 NZ_KK316846.1 Protein Homology CDS 446371 448476 . + 0 ID=cds-WP_003898554.1;Parent=gene-AL60_RS07745;Dbxref=GenBank:WP_003898554.1;Name=WP_003898554.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177746.1;locus_tag=AL60_RS07745;product=elongation factor G;protein_id=WP_003898554.1;transl_table=11 NZ_KK316846.1 RefSeq gene 448707 449897 . + . ID=gene-AL60_RS07750;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AL60_RS07750;old_locus_tag=AL60_00423 NZ_KK316846.1 Protein Homology CDS 448707 449897 . + 0 ID=cds-WP_003403463.1;Parent=gene-AL60_RS07750;Dbxref=GenBank:WP_003403463.1;Name=WP_003403463.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005055596.1;locus_tag=AL60_RS07750;product=elongation factor Tu;protein_id=WP_003403463.1;transl_table=11 NZ_KK316846.1 RefSeq gene 450035 450832 . + . ID=gene-AL60_RS07755;Name=AL60_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07755;old_locus_tag=AL60_00424 NZ_KK316846.1 Protein Homology CDS 450035 450832 . + 0 ID=cds-WP_003403465.1;Parent=gene-AL60_RS07755;Dbxref=GenBank:WP_003403465.1;Name=WP_003403465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215200.1;locus_tag=AL60_RS07755;product=SHOCT domain-containing protein;protein_id=WP_003403465.1;transl_table=11 NZ_KK316846.1 RefSeq gene 450985 451812 . + . ID=gene-AL60_RS07760;Name=AL60_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07760;old_locus_tag=AL60_00425 NZ_KK316846.1 Protein Homology CDS 450985 451812 . + 0 ID=cds-WP_003403468.1;Parent=gene-AL60_RS07760;Dbxref=GenBank:WP_003403468.1;Name=WP_003403468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215201.1;locus_tag=AL60_RS07760;product=Rv0687 family mycofactocin-dependent SDR oxidoreductase;protein_id=WP_003403468.1;transl_table=11 NZ_KK316846.1 RefSeq gene 451826 453046 . + . ID=gene-AL60_RS07765;Name=AL60_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07765;old_locus_tag=AL60_00426 NZ_KK316846.1 Protein Homology CDS 451826 453046 . + 0 ID=cds-WP_003901000.1;Parent=gene-AL60_RS07765;Dbxref=GenBank:WP_003901000.1;Name=WP_003901000.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215202.1;locus_tag=AL60_RS07765;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003901000.1;transl_table=11 NZ_KK316846.1 RefSeq gene 453058 453306 . + . ID=gene-AL60_RS27315;Name=AL60_RS27315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27315 NZ_KK316846.1 GeneMarkS-2+ CDS 453058 453306 . + 0 ID=cds-WP_178121162.1;Parent=gene-AL60_RS27315;Dbxref=GenBank:WP_178121162.1;Name=WP_178121162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS27315;product=hypothetical protein;protein_id=WP_178121162.1;transl_table=11 NZ_KK316846.1 RefSeq gene 453910 454959 . - . ID=gene-AL60_RS07775;Name=AL60_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07775;old_locus_tag=AL60_00428 NZ_KK316846.1 Protein Homology CDS 453910 454959 . - 0 ID=cds-WP_003403477.1;Parent=gene-AL60_RS07775;Dbxref=GenBank:WP_003403477.1;Name=WP_003403477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215204.1;locus_tag=AL60_RS07775;product=DUF2332 domain-containing protein;protein_id=WP_003403477.1;transl_table=11 NZ_KK316846.1 RefSeq gene 454956 455552 . - . ID=gene-AL60_RS07780;Name=mftR;gbkey=Gene;gene=mftR;gene_biotype=protein_coding;locus_tag=AL60_RS07780;old_locus_tag=AL60_00429 NZ_KK316846.1 Protein Homology CDS 454956 455552 . - 0 ID=cds-WP_003403482.1;Parent=gene-AL60_RS07780;Dbxref=GenBank:WP_003403482.1;Name=WP_003403482.1;Note=MftR%2C the mycofactocin system transcriptional regulator%2C is an uncharacterized TetR family DNA-binding transcription factor. Its role is inferred by context. It occurs as part of the biosynthesis locus for mycofactocin%2C a partially characterized electron carrier derived from the terminal Val-Tyr dipeptide of the precursor peptide MftA%2C through a radical SAM enzyme-mediated process.;Ontology_term=GO:0006355,GO:0003700,GO:0036042;gbkey=CDS;gene=mftR;go_function=DNA-binding transcription factor activity|0003700||IEA,long-chain fatty acyl-CoA binding|0036042||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215205.1;locus_tag=AL60_RS07780;product=mycofactocin system transcriptional regulator;protein_id=WP_003403482.1;transl_table=11 NZ_KK316846.1 RefSeq gene 455643 455732 . + . ID=gene-AL60_RS26740;Name=mftA;gbkey=Gene;gene=mftA;gene_biotype=protein_coding;locus_tag=AL60_RS26740 NZ_KK316846.1 Protein Homology CDS 455643 455732 . + 0 ID=cds-WP_003403483.1;Parent=gene-AL60_RS26740;Dbxref=GenBank:WP_003403483.1;Name=WP_003403483.1;Note=Mycofactocin is a small molecule electron carrier derived from the final two amino acids%2C Val-Tyr%2C of MftA%2C the mycofactocin precursor. It plays a role in redox homeostasis and the metabolism of alcohols and aldehydes in Actinobacteria%2C including Mycobacterium tuberculosis.;Ontology_term=GO:0140604,GO:0009055;gbkey=CDS;gene=mftA;go_function=electron transfer activity|0009055||IEA;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409348.2;locus_tag=AL60_RS26740;product=mycofactocin precursor MftA;protein_id=WP_003403483.1;transl_table=11 NZ_KK316846.1 RefSeq gene 455717 456046 . + . ID=gene-AL60_RS07785;Name=mftB;gbkey=Gene;gene=mftB;gene_biotype=protein_coding;locus_tag=AL60_RS07785;old_locus_tag=AL60_00431 NZ_KK316846.1 Protein Homology CDS 455717 456046 . + 0 ID=cds-WP_003403486.1;Parent=gene-AL60_RS07785;Dbxref=GenBank:WP_003403486.1;Name=WP_003403486.1;Note=MftB%2C a small protein%2C is a peptide chaperone that assists the radical SAM enzyme MftC in performing two modifications to the C-terminal Val-Tyr dipeptide of the mycofactocin precursor peptide%2C MftA. MftB's role is analogous to the role of PqqD in the biosynthesis of PQQ%2C a cofactor that derives entirely from a Tyr and a Glu in the precursor PqqA.;Ontology_term=GO:0140604,GO:0042277;gbkey=CDS;gene=mftB;go_function=peptide binding|0042277||IEA;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215206.1;locus_tag=AL60_RS07785;product=mycofactocin biosynthesis chaperone MftB;protein_id=WP_003403486.1;transl_table=11 NZ_KK316846.1 RefSeq gene 456043 457218 . + . ID=gene-AL60_RS07790;Name=mftC;gbkey=Gene;gene=mftC;gene_biotype=protein_coding;locus_tag=AL60_RS07790;old_locus_tag=AL60_00432 NZ_KK316846.1 Protein Homology CDS 456043 457218 . + 0 ID=cds-WP_003403490.1;Parent=gene-AL60_RS07790;Dbxref=GenBank:WP_003403490.1;Name=WP_003403490.1;Note=MftC is a radical SAM/SPASM enzyme that catalyzes the first two steps in biosynthesis of the electron carrier mycofactocin from the terminal Val-Tyr dipeptide of the precursor peptide MftA.;Ontology_term=GO:0031179,GO:0140604,GO:0051539;gbkey=CDS;gene=mftC;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptide modification|0031179||IEA,mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215207.1;locus_tag=AL60_RS07790;product=mycofactocin radical SAM maturase;protein_id=WP_003403490.1;transl_table=11 NZ_KK316846.1 RefSeq gene 457221 458411 . + . ID=gene-AL60_RS07795;Name=mftD;gbkey=Gene;gene=mftD;gene_biotype=protein_coding;locus_tag=AL60_RS07795;old_locus_tag=AL60_00433 NZ_KK316846.1 Protein Homology CDS 457221 458411 . + 0 ID=cds-WP_003898557.1;Parent=gene-AL60_RS07795;Dbxref=GenBank:WP_003898557.1;Name=WP_003898557.1;Note=MftD%2C an enzyme found in the mycofactocin biosynthesis locus%2C performs an oxidative deamination of 3-amino-5-[(p-hydroxyphenyl)methyl]-4%2C4-dimethyl-2-pyrrolidinone (AHDP). The resulting compound%2C now called pre-mycofactocin (PMFT)%2C is a biologically active redox cofactor that can oxidize the non-exchangeable NADH of TIGR03971 family SDR-type oxidoreductases.;Ontology_term=GO:0140604;gbkey=CDS;gene=mftD;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215208.1;locus_tag=AL60_RS07795;product=pre-mycofactocin synthase MftD;protein_id=WP_003898557.1;transl_table=11 NZ_KK316846.1 RefSeq gene 458601 459356 . + . ID=gene-AL60_RS07800;Name=mftE;gbkey=Gene;gene=mftE;gene_biotype=protein_coding;locus_tag=AL60_RS07800;old_locus_tag=AL60_00434 NZ_KK316846.1 Protein Homology CDS 458601 459356 . + 0 ID=cds-WP_003403497.1;Parent=gene-AL60_RS07800;Dbxref=GenBank:WP_003403497.1;Name=WP_003403497.1;Ontology_term=GO:0140604;gbkey=CDS;gene=mftE;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215209.1;locus_tag=AL60_RS07800;product=mycofactocin biosynthesis peptidyl-dipeptidase MftE;protein_id=WP_003403497.1;transl_table=11 NZ_KK316846.1 RefSeq gene 459405 460817 . + . ID=gene-AL60_RS07805;Name=mftF;gbkey=Gene;gene=mftF;gene_biotype=protein_coding;locus_tag=AL60_RS07805;old_locus_tag=AL60_00435 NZ_KK316846.1 Protein Homology CDS 459405 460817 . + 0 ID=cds-WP_003906425.1;Parent=gene-AL60_RS07805;Dbxref=GenBank:WP_003906425.1;Name=WP_003906425.1;Note=Members of this protein family%2C MftF%2C are glycosyltransferases%2C members of PF00535 (glycosyl transferase family 2). The encoding gene is found as part of the mycofactocin cassette%2C in Mycobacterium tuberculosis%2C many other Actinobacteria%2C and occasional members of other lineages. Mycofactocin itself%2C a putative redox carrier%2C is a heavily modified derivative of the C-terminal Val-Tyr dipeptide of the mycofactocin precursor MftA (TIGR03969).;Ontology_term=GO:0140604,GO:0016740;gbkey=CDS;gene=mftF;go_function=transferase activity|0016740||IEA;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215210.1;locus_tag=AL60_RS07805;product=mycofactocin biosynthesis glycosyltransferase MftF;protein_id=WP_003906425.1;transl_table=11 NZ_KK316846.1 RefSeq gene 460819 462258 . + . ID=gene-AL60_RS07810;Name=mftG;gbkey=Gene;gene=mftG;gene_biotype=protein_coding;locus_tag=AL60_RS07810;old_locus_tag=AL60_00436 NZ_KK316846.1 Protein Homology CDS 460819 462258 . + 0 ID=cds-WP_003403503.1;Parent=gene-AL60_RS07810;Dbxref=GenBank:WP_003403503.1;Name=WP_003403503.1;Ontology_term=GO:0016614;gbkey=CDS;gene=mftG;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215211.1;locus_tag=AL60_RS07810;product=mycofactocin dehydrogenase MftG;protein_id=WP_003403503.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 462534 462680 . + . ID=gene-AL60_RS25505;Name=AL60_RS25505;end_range=462680,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS25505;partial=true;pseudo=true;start_range=.,462534 NZ_KK316846.1 Protein Homology CDS 462534 462680 . + 0 ID=cds-AL60_RS25505;Parent=gene-AL60_RS25505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=462680,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491516.1;locus_tag=AL60_RS25505;partial=true;product=transposase;pseudo=true;start_range=.,462534;transl_table=11 NZ_KK316846.1 RefSeq gene 463515 463736 . + . ID=gene-AL60_RS07820;Name=AL60_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07820;old_locus_tag=AL60_00438 NZ_KK316846.1 Protein Homology CDS 463515 463736 . + 0 ID=cds-WP_003403569.1;Parent=gene-AL60_RS07820;Dbxref=GenBank:WP_003403569.1;Name=WP_003403569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215213.1;locus_tag=AL60_RS07820;product=hypothetical protein;protein_id=WP_003403569.1;transl_table=11 NZ_KK316846.1 RefSeq gene 463990 464220 . - . ID=gene-AL60_RS27420;Name=AL60_RS27420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27420 NZ_KK316846.1 Protein Homology CDS 463990 464220 . - 0 ID=cds-WP_003403573.1;Parent=gene-AL60_RS27420;Dbxref=GenBank:WP_003403573.1;Name=WP_003403573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403573.1;locus_tag=AL60_RS27420;product=hypothetical protein;protein_id=WP_003403573.1;transl_table=11 NZ_KK316846.1 RefSeq gene 464373 464678 . + . ID=gene-AL60_RS07825;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AL60_RS07825;old_locus_tag=AL60_00439 NZ_KK316846.1 Protein Homology CDS 464373 464678 . + 0 ID=cds-WP_003403578.1;Parent=gene-AL60_RS07825;Dbxref=GenBank:WP_003403578.1;Name=WP_003403578.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009948626.1;locus_tag=AL60_RS07825;product=30S ribosomal protein S10;protein_id=WP_003403578.1;transl_table=11 NZ_KK316846.1 RefSeq gene 464695 465348 . + . ID=gene-AL60_RS07830;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AL60_RS07830;old_locus_tag=AL60_00440 NZ_KK316846.1 Protein Homology CDS 464695 465348 . + 0 ID=cds-WP_003403579.1;Parent=gene-AL60_RS07830;Dbxref=GenBank:WP_003403579.1;Name=WP_003403579.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215215.1;locus_tag=AL60_RS07830;product=50S ribosomal protein L3;protein_id=WP_003403579.1;transl_table=11 NZ_KK316846.1 RefSeq gene 465348 466019 . + . ID=gene-AL60_RS07835;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AL60_RS07835;old_locus_tag=AL60_00441 NZ_KK316846.1 Protein Homology CDS 465348 466019 . + 0 ID=cds-WP_003403580.1;Parent=gene-AL60_RS07835;Dbxref=GenBank:WP_003403580.1;Name=WP_003403580.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215216.1;locus_tag=AL60_RS07835;product=50S ribosomal protein L4;protein_id=WP_003403580.1;transl_table=11 NZ_KK316846.1 RefSeq gene 466019 466321 . + . ID=gene-AL60_RS07840;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AL60_RS07840;old_locus_tag=AL60_00442 NZ_KK316846.1 Protein Homology CDS 466019 466321 . + 0 ID=cds-WP_003403581.1;Parent=gene-AL60_RS07840;Dbxref=GenBank:WP_003403581.1;Name=WP_003403581.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215217.1;locus_tag=AL60_RS07840;product=50S ribosomal protein L23;protein_id=WP_003403581.1;transl_table=11 NZ_KK316846.1 RefSeq gene 466468 467310 . + . ID=gene-AL60_RS07845;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AL60_RS07845;old_locus_tag=AL60_00443 NZ_KK316846.1 Protein Homology CDS 466468 467310 . + 0 ID=cds-WP_003403582.1;Parent=gene-AL60_RS07845;Dbxref=GenBank:WP_003403582.1;Name=WP_003403582.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215218.1;locus_tag=AL60_RS07845;product=50S ribosomal protein L2;protein_id=WP_003403582.1;transl_table=11 NZ_KK316846.1 RefSeq gene 467351 467632 . + . ID=gene-AL60_RS07850;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AL60_RS07850;old_locus_tag=AL60_00444 NZ_KK316846.1 Protein Homology CDS 467351 467632 . + 0 ID=cds-WP_003403584.1;Parent=gene-AL60_RS07850;Dbxref=GenBank:WP_003403584.1;Name=WP_003403584.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215219.1;locus_tag=AL60_RS07850;product=30S ribosomal protein S19;protein_id=WP_003403584.1;transl_table=11 NZ_KK316846.1 RefSeq gene 467629 468222 . + . ID=gene-AL60_RS07855;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AL60_RS07855;old_locus_tag=AL60_00445 NZ_KK316846.1 Protein Homology CDS 467629 468222 . + 0 ID=cds-WP_003403587.1;Parent=gene-AL60_RS07855;Dbxref=GenBank:WP_003403587.1;Name=WP_003403587.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215220.1;locus_tag=AL60_RS07855;product=50S ribosomal protein L22;protein_id=WP_003403587.1;transl_table=11 NZ_KK316846.1 RefSeq gene 468222 469046 . + . ID=gene-AL60_RS07860;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AL60_RS07860;old_locus_tag=AL60_00446 NZ_KK316846.1 Protein Homology CDS 468222 469046 . + 0 ID=cds-WP_003403590.1;Parent=gene-AL60_RS07860;Dbxref=GenBank:WP_003403590.1;Name=WP_003403590.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215221.1;locus_tag=AL60_RS07860;product=30S ribosomal protein S3;protein_id=WP_003403590.1;transl_table=11 NZ_KK316846.1 RefSeq gene 469050 469466 . + . ID=gene-AL60_RS07865;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AL60_RS07865;old_locus_tag=AL60_00447 NZ_KK316846.1 Protein Homology CDS 469050 469466 . + 0 ID=cds-WP_003403592.1;Parent=gene-AL60_RS07865;Dbxref=GenBank:WP_003403592.1;Name=WP_003403592.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215222.1;locus_tag=AL60_RS07865;product=50S ribosomal protein L16;protein_id=WP_003403592.1;transl_table=11 NZ_KK316846.1 RefSeq gene 469466 469699 . + . ID=gene-AL60_RS07870;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AL60_RS07870;old_locus_tag=AL60_00448 NZ_KK316846.1 Protein Homology CDS 469466 469699 . + 0 ID=cds-WP_003403594.1;Parent=gene-AL60_RS07870;Dbxref=GenBank:WP_003403594.1;Name=WP_003403594.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215223.1;locus_tag=AL60_RS07870;product=50S ribosomal protein L29;protein_id=WP_003403594.1;transl_table=11 NZ_KK316846.1 RefSeq gene 469696 470106 . + . ID=gene-AL60_RS07875;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AL60_RS07875;old_locus_tag=AL60_00449 NZ_KK316846.1 Protein Homology CDS 469696 470106 . + 0 ID=cds-WP_003403596.1;Parent=gene-AL60_RS07875;Dbxref=GenBank:WP_003403596.1;Name=WP_003403596.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215224.1;locus_tag=AL60_RS07875;product=30S ribosomal protein S17;protein_id=WP_003403596.1;transl_table=11 NZ_KK316846.1 RefSeq gene 470275 472638 . + . ID=gene-AL60_RS07880;Name=atsA;gbkey=Gene;gene=atsA;gene_biotype=protein_coding;locus_tag=AL60_RS07880;old_locus_tag=AL60_00450 NZ_KK316846.1 Protein Homology CDS 470275 472638 . + 0 ID=cds-WP_003898561.1;Parent=gene-AL60_RS07880;Dbxref=GenBank:WP_003898561.1;Name=WP_003898561.1;gbkey=CDS;gene=atsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215225.1;locus_tag=AL60_RS07880;product=arylsulfatase AtsA;protein_id=WP_003898561.1;transl_table=11 NZ_KK316846.1 RefSeq gene 472686 473585 . + . ID=gene-AL60_RS07885;Name=AL60_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07885;old_locus_tag=AL60_00451 NZ_KK316846.1 Protein Homology CDS 472686 473585 . + 0 ID=cds-WP_003403610.1;Parent=gene-AL60_RS07885;Dbxref=GenBank:WP_003403610.1;Name=WP_003403610.1;Ontology_term=GO:0016670,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C oxygen as acceptor|0016670||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215226.1;locus_tag=AL60_RS07885;product=formylglycine-generating enzyme family protein;protein_id=WP_003403610.1;transl_table=11 NZ_KK316846.1 RefSeq gene 473886 474827 . + . ID=gene-AL60_RS07890;Name=AL60_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07890;old_locus_tag=AL60_00452 NZ_KK316846.1 Protein Homology CDS 473886 474827 . + 0 ID=cds-WP_003898562.1;Parent=gene-AL60_RS07890;Dbxref=GenBank:WP_003898562.1;Name=WP_003898562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215227.1;locus_tag=AL60_RS07890;product=DUF4436 domain-containing protein;protein_id=WP_003898562.1;transl_table=11 NZ_KK316846.1 RefSeq gene 475313 475681 . + . ID=gene-AL60_RS07895;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AL60_RS07895;old_locus_tag=AL60_00453 NZ_KK316846.1 Protein Homology CDS 475313 475681 . + 0 ID=cds-WP_003403649.1;Parent=gene-AL60_RS07895;Dbxref=GenBank:WP_003403649.1;Name=WP_003403649.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1;locus_tag=AL60_RS07895;product=50S ribosomal protein L14;protein_id=WP_003403649.1;transl_table=11 NZ_KK316846.1 RefSeq gene 475682 475999 . + . ID=gene-AL60_RS07900;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AL60_RS07900;old_locus_tag=AL60_00454 NZ_KK316846.1 Protein Homology CDS 475682 475999 . + 0 ID=cds-WP_003403654.1;Parent=gene-AL60_RS07900;Dbxref=GenBank:WP_003403654.1;Name=WP_003403654.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215229.1;locus_tag=AL60_RS07900;product=50S ribosomal protein L24;protein_id=WP_003403654.1;transl_table=11 NZ_KK316846.1 RefSeq gene 475999 476562 . + . ID=gene-AL60_RS07905;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AL60_RS07905;old_locus_tag=AL60_00455 NZ_KK316846.1 Protein Homology CDS 475999 476562 . + 0 ID=cds-WP_003403660.1;Parent=gene-AL60_RS07905;Dbxref=GenBank:WP_003403660.1;Name=WP_003403660.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215230.1;locus_tag=AL60_RS07905;product=50S ribosomal protein L5;protein_id=WP_003403660.1;transl_table=11 NZ_KK316846.1 RefSeq gene 476567 476752 . + . ID=gene-AL60_RS07910;Name=AL60_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07910;old_locus_tag=AL60_00456 NZ_KK316846.1 Protein Homology CDS 476567 476752 . + 0 ID=cds-WP_003403667.1;Parent=gene-AL60_RS07910;Dbxref=GenBank:WP_003403667.1;Name=WP_003403667.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003948630.1;locus_tag=AL60_RS07910;product=type Z 30S ribosomal protein S14;protein_id=WP_003403667.1;transl_table=11 NZ_KK316846.1 RefSeq gene 476916 477314 . + . ID=gene-AL60_RS07915;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AL60_RS07915;old_locus_tag=AL60_00457 NZ_KK316846.1 Protein Homology CDS 476916 477314 . + 0 ID=cds-WP_003403669.1;Parent=gene-AL60_RS07915;Dbxref=GenBank:WP_003403669.1;Name=WP_003403669.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908572.1;locus_tag=AL60_RS07915;product=30S ribosomal protein S8;protein_id=WP_003403669.1;transl_table=11 NZ_KK316846.1 RefSeq gene 477338 477877 . + . ID=gene-AL60_RS07920;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AL60_RS07920;old_locus_tag=AL60_00458 NZ_KK316846.1 Protein Homology CDS 477338 477877 . + 0 ID=cds-WP_003403673.1;Parent=gene-AL60_RS07920;Dbxref=GenBank:WP_003403673.1;Name=WP_003403673.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908571.1;locus_tag=AL60_RS07920;product=50S ribosomal protein L6;protein_id=WP_003403673.1;transl_table=11 NZ_KK316846.1 RefSeq gene 477880 478248 . + . ID=gene-AL60_RS07925;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AL60_RS07925;old_locus_tag=AL60_00459 NZ_KK316846.1 Protein Homology CDS 477880 478248 . + 0 ID=cds-WP_003403677.1;Parent=gene-AL60_RS07925;Dbxref=GenBank:WP_003403677.1;Name=WP_003403677.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215234.1;locus_tag=AL60_RS07925;product=50S ribosomal protein L18;protein_id=WP_003403677.1;transl_table=11 NZ_KK316846.1 RefSeq gene 478268 478930 . + . ID=gene-AL60_RS07930;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AL60_RS07930;old_locus_tag=AL60_00460 NZ_KK316846.1 Protein Homology CDS 478268 478930 . + 0 ID=cds-WP_012054244.1;Parent=gene-AL60_RS07930;Dbxref=GenBank:WP_012054244.1;Name=WP_012054244.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215235.1;locus_tag=AL60_RS07930;product=30S ribosomal protein S5;protein_id=WP_012054244.1;transl_table=11 NZ_KK316846.1 RefSeq gene 478933 479130 . + . ID=gene-AL60_RS07935;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AL60_RS07935;old_locus_tag=AL60_00461 NZ_KK316846.1 Protein Homology CDS 478933 479130 . + 0 ID=cds-WP_003403683.1;Parent=gene-AL60_RS07935;Dbxref=GenBank:WP_003403683.1;Name=WP_003403683.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215236.1;locus_tag=AL60_RS07935;product=50S ribosomal protein L30;protein_id=WP_003403683.1;transl_table=11 NZ_KK316846.1 RefSeq gene 479130 479570 . + . ID=gene-AL60_RS07940;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AL60_RS07940;old_locus_tag=AL60_00462 NZ_KK316846.1 Protein Homology CDS 479130 479570 . + 0 ID=cds-WP_003898563.1;Parent=gene-AL60_RS07940;Dbxref=GenBank:WP_003898563.1;Name=WP_003898563.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215237.1;locus_tag=AL60_RS07940;product=50S ribosomal protein L15;protein_id=WP_003898563.1;transl_table=11 NZ_KK316846.1 RefSeq gene 479672 481474 . + . ID=gene-AL60_RS07945;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=AL60_RS07945;old_locus_tag=AL60_00463 NZ_KK316846.1 Protein Homology CDS 479672 481474 . + 0 ID=cds-WP_003403686.1;Parent=gene-AL60_RS07945;Dbxref=GenBank:WP_003403686.1;Name=WP_003403686.1;Ontology_term=GO:0006465,GO:0006508,GO:0008233,GO:0016020;gbkey=CDS;gene=sppA;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003879455.1;locus_tag=AL60_RS07945;product=signal peptide peptidase SppA;protein_id=WP_003403686.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 481471 482384 . - . ID=gene-AL60_RS07950;Name=AL60_RS07950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS07950;old_locus_tag=AL60_00465;pseudo=true NZ_KK316846.1 Protein Homology CDS 481471 482384 . - 0 ID=cds-AL60_RS07950;Parent=gene-AL60_RS07950;Note=frameshifted;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020727409.1;locus_tag=AL60_RS07950;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 482477 483580 . - . ID=gene-AL60_RS07955;Name=AL60_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07955;old_locus_tag=AL60_00466 NZ_KK316846.1 Protein Homology CDS 482477 483580 . - 0 ID=cds-WP_003403691.1;Parent=gene-AL60_RS07955;Dbxref=GenBank:WP_003403691.1;Name=WP_003403691.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215240.1;locus_tag=AL60_RS07955;product=class I SAM-dependent methyltransferase;protein_id=WP_003403691.1;transl_table=11 NZ_KK316846.1 RefSeq gene 483783 484439 . - . ID=gene-AL60_RS07960;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=AL60_RS07960;old_locus_tag=AL60_00467 NZ_KK316846.1 Protein Homology CDS 483783 484439 . - 0 ID=cds-WP_003403695.1;Parent=gene-AL60_RS07960;Dbxref=GenBank:WP_003403695.1;Name=WP_003403695.1;gbkey=CDS;gene=fucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215241.1;locus_tag=AL60_RS07960;product=L-fuculose-phosphate aldolase;protein_id=WP_003403695.1;transl_table=11 NZ_KK316846.1 RefSeq gene 484436 485416 . - . ID=gene-AL60_RS07965;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AL60_RS07965;old_locus_tag=AL60_00468 NZ_KK316846.1 Protein Homology CDS 484436 485416 . - 0 ID=cds-WP_003898565.1;Parent=gene-AL60_RS07965;Dbxref=GenBank:WP_003898565.1;Name=WP_003898565.1;gbkey=CDS;gene=serA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215242.1;locus_tag=AL60_RS07965;product=D-3-phosphoglycerate dehydrogenase SerA;protein_id=WP_003898565.1;transl_table=11 NZ_KK316846.1 RefSeq gene 485447 486793 . + . ID=gene-AL60_RS07970;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AL60_RS07970;old_locus_tag=AL60_00469 NZ_KK316846.1 Protein Homology CDS 485447 486793 . + 0 ID=cds-WP_003900204.1;Parent=gene-AL60_RS07970;Dbxref=GenBank:WP_003900204.1;Name=WP_003900204.1;gbkey=CDS;gene=xylB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215243.1;locus_tag=AL60_RS07970;product=D-xylulose kinase;protein_id=WP_003900204.1;transl_table=11 NZ_KK316846.1 RefSeq gene 486848 487534 . + . ID=gene-AL60_RS07975;Name=AL60_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07975;old_locus_tag=AL60_00470 NZ_KK316846.1 Protein Homology CDS 486848 487534 . + 0 ID=cds-WP_009935961.1;Parent=gene-AL60_RS07975;Dbxref=GenBank:WP_009935961.1;Name=WP_009935961.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935961.1;locus_tag=AL60_RS07975;product=GNAT family N-acetyltransferase;protein_id=WP_009935961.1;transl_table=11 NZ_KK316846.1 RefSeq gene 487623 488579 . - . ID=gene-AL60_RS07980;Name=AL60_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS07980;old_locus_tag=AL60_00471 NZ_KK316846.1 Protein Homology CDS 487623 488579 . - 0 ID=cds-WP_003403717.1;Parent=gene-AL60_RS07980;Dbxref=GenBank:WP_003403717.1;Name=WP_003403717.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215245.1;locus_tag=AL60_RS07980;product=class I SAM-dependent methyltransferase;protein_id=WP_003403717.1;transl_table=11 NZ_KK316846.1 RefSeq gene 488740 490065 . + . ID=gene-AL60_RS07985;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AL60_RS07985;old_locus_tag=AL60_00472 NZ_KK316846.1 Protein Homology CDS 488740 490065 . + 0 ID=cds-WP_003403723.1;Parent=gene-AL60_RS07985;Dbxref=GenBank:WP_003403723.1;Name=WP_003403723.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215246.1;locus_tag=AL60_RS07985;product=preprotein translocase subunit SecY;protein_id=WP_003403723.1;transl_table=11 NZ_KK316846.1 RefSeq gene 490062 490607 . + . ID=gene-AL60_RS07990;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AL60_RS07990;old_locus_tag=AL60_00473 NZ_KK316846.1 Protein Homology CDS 490062 490607 . + 0 ID=cds-WP_003403726.1;Parent=gene-AL60_RS07990;Dbxref=GenBank:WP_003403726.1;Name=WP_003403726.1;Ontology_term=GO:0006139,GO:0005524,GO:0019205;gbkey=CDS;gene=adk;go_function=ATP binding|0005524||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215247.1;locus_tag=AL60_RS07990;product=adenylate kinase;protein_id=WP_003403726.1;transl_table=11 NZ_KK316846.1 RefSeq gene 490610 491410 . + . ID=gene-AL60_RS07995;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AL60_RS07995;old_locus_tag=AL60_00474 NZ_KK316846.1 Protein Homology CDS 490610 491410 . + 0 ID=cds-WP_003403728.1;Parent=gene-AL60_RS07995;Dbxref=GenBank:WP_003403728.1;Name=WP_003403728.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177748.1;locus_tag=AL60_RS07995;product=type I methionyl aminopeptidase;protein_id=WP_003403728.1;transl_table=11 NZ_KK316846.1 RefSeq gene 491483 492016 . + . ID=gene-AL60_RS08000;Name=sigL;gbkey=Gene;gene=sigL;gene_biotype=protein_coding;locus_tag=AL60_RS08000;old_locus_tag=AL60_00475 NZ_KK316846.1 Protein Homology CDS 491483 492016 . + 0 ID=cds-WP_003403731.1;Parent=gene-AL60_RS08000;Dbxref=GenBank:WP_003403731.1;Name=WP_003403731.1;gbkey=CDS;gene=sigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215249.1;locus_tag=AL60_RS08000;product=sigma-70 family RNA polymerase sigma factor SigL;protein_id=WP_003403731.1;transl_table=11 NZ_KK316846.1 RefSeq gene 492080 492832 . + . ID=gene-AL60_RS08005;Name=rslA;gbkey=Gene;gene=rslA;gene_biotype=protein_coding;locus_tag=AL60_RS08005;old_locus_tag=AL60_00476 NZ_KK316846.1 Protein Homology CDS 492080 492832 . + 0 ID=cds-WP_003403733.1;Parent=gene-AL60_RS08005;Dbxref=GenBank:WP_003403733.1;Name=WP_003403733.1;gbkey=CDS;gene=rslA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215250.1;locus_tag=AL60_RS08005;product=anti-sigma-L factor RslA;protein_id=WP_003403733.1;transl_table=11 NZ_KK316846.1 RefSeq gene 492887 493099 . + . ID=gene-AL60_RS25510;Name=AL60_RS25510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25510 NZ_KK316846.1 Protein Homology CDS 492887 493099 . + 0 ID=cds-WP_003898567.1;Parent=gene-AL60_RS25510;Dbxref=GenBank:WP_003898567.1;Name=WP_003898567.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898567.1;locus_tag=AL60_RS25510;product=thiamine pyrophosphate-binding protein;protein_id=WP_003898567.1;transl_table=11 NZ_KK316846.1 RefSeq gene 493147 493644 . + . ID=gene-AL60_RS08010;Name=AL60_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08010;old_locus_tag=AL60_00477 NZ_KK316846.1 Protein Homology CDS 493147 493644 . + 0 ID=cds-WP_003403738.1;Parent=gene-AL60_RS08010;Dbxref=GenBank:WP_003403738.1;Name=WP_003403738.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215251.1;locus_tag=AL60_RS08010;product=MarR family transcriptional regulator;protein_id=WP_003403738.1;transl_table=11 NZ_KK316846.1 RefSeq gene 493641 493853 . + . ID=gene-AL60_RS25515;Name=AL60_RS25515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25515 NZ_KK316846.1 Protein Homology CDS 493641 493853 . + 0 ID=cds-WP_003906436.1;Parent=gene-AL60_RS25515;Dbxref=GenBank:WP_003906436.1;Name=WP_003906436.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL60_RS25515;product=PE domain-containing protein;protein_id=WP_003906436.1;transl_table=11 NZ_KK316846.1 RefSeq gene 494002 494550 . + . ID=gene-AL60_RS08015;Name=AL60_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08015;old_locus_tag=AL60_00478 NZ_KK316846.1 Protein Homology CDS 494002 494550 . + 0 ID=cds-WP_003403741.1;Parent=gene-AL60_RS08015;Dbxref=GenBank:WP_003403741.1;Name=WP_003403741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215252.1;locus_tag=AL60_RS08015;product=TIGR03086 family metal-binding protein;protein_id=WP_003403741.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 494570 494713 . - . ID=gene-AL60_RS25520;Name=AL60_RS25520;end_range=494713,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS25520;partial=true;pseudo=true;start_range=.,494570 NZ_KK316846.1 Protein Homology CDS 494570 494713 . - 0 ID=cds-AL60_RS25520;Parent=gene-AL60_RS25520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=494713,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403844.1;locus_tag=AL60_RS25520;partial=true;product=3-hydroxyisobutyrate dehydrogenase;pseudo=true;start_range=.,494570;transl_table=11 NZ_KK316846.1 RefSeq gene 494795 495601 . + . ID=gene-AL60_RS08020;Name=AL60_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08020;old_locus_tag=AL60_00479 NZ_KK316846.1 Protein Homology CDS 494795 495601 . + 0 ID=cds-WP_003898568.1;Parent=gene-AL60_RS08020;Dbxref=GenBank:WP_003898568.1;Name=WP_003898568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215253.1;locus_tag=AL60_RS08020;product=DUF4226 domain-containing protein;protein_id=WP_003898568.1;transl_table=11 NZ_KK316846.1 RefSeq gene 495716 496243 . + . ID=gene-AL60_RS08025;Name=AL60_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08025;old_locus_tag=AL60_00480 NZ_KK316846.1 Protein Homology CDS 495716 496243 . + 0 ID=cds-WP_003901008.1;Parent=gene-AL60_RS08025;Dbxref=GenBank:WP_003901008.1;Name=WP_003901008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215254.1;locus_tag=AL60_RS08025;product=DUF7956 family protein;protein_id=WP_003901008.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 496465 496788 . + . ID=gene-AL60_RS08030;Name=AL60_RS08030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS08030;old_locus_tag=AL60_00481;partial=true;pseudo=true;start_range=.,496465 NZ_KK316846.1 Protein Homology CDS 496465 496788 . + 0 ID=cds-AL60_RS08030;Parent=gene-AL60_RS08030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215829.1;locus_tag=AL60_RS08030;partial=true;product=transposase;pseudo=true;start_range=.,496465;transl_table=11 NZ_KK316846.1 RefSeq gene 496921 497448 . + . ID=gene-AL60_RS08035;Name=AL60_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08035;old_locus_tag=AL60_00482 NZ_KK316846.1 Protein Homology CDS 496921 497448 . + 0 ID=cds-WP_003901009.1;Parent=gene-AL60_RS08035;Dbxref=GenBank:WP_003901009.1;Name=WP_003901009.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177749.1;locus_tag=AL60_RS08035;product=PE family protein;protein_id=WP_003901009.1;transl_table=11 NZ_KK316846.1 RefSeq gene 497826 498383 . - . ID=gene-AL60_RS08040;Name=AL60_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08040;old_locus_tag=AL60_00483 NZ_KK316846.1 Protein Homology CDS 497826 498383 . - 0 ID=cds-WP_003403820.1;Parent=gene-AL60_RS08040;Dbxref=GenBank:WP_003403820.1;Name=WP_003403820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215257.1;locus_tag=AL60_RS08040;product=DUF6036 family nucleotidyltransferase;protein_id=WP_003403820.1;transl_table=11 NZ_KK316846.1 RefSeq gene 498380 498886 . - . ID=gene-AL60_RS08045;Name=AL60_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08045;old_locus_tag=AL60_00484 NZ_KK316846.1 Protein Homology CDS 498380 498886 . - 0 ID=cds-WP_003403827.1;Parent=gene-AL60_RS08045;Dbxref=GenBank:WP_003403827.1;Name=WP_003403827.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215258.1;locus_tag=AL60_RS08045;product=helix-turn-helix domain-containing protein;protein_id=WP_003403827.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 498999 499142 . - . ID=gene-AL60_RS08050;Name=AL60_RS08050;end_range=499142,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS08050;old_locus_tag=AL60_00485;partial=true;pseudo=true NZ_KK316846.1 Protein Homology CDS 498999 499142 . - 0 ID=cds-AL60_RS08050;Parent=gene-AL60_RS08050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=499142,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012392970.1;locus_tag=AL60_RS08050;partial=true;product=3-hydroxyisobutyryl-CoA hydrolase;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 499154 499413 . + . ID=gene-AL60_RS27035;Name=AL60_RS27035;end_range=499413,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27035;partial=true;pseudo=true;start_range=.,499154 NZ_KK316846.1 Protein Homology CDS 499154 499413 . + 0 ID=cds-AL60_RS27035;Parent=gene-AL60_RS27035;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=499413,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010924697.1;locus_tag=AL60_RS27035;partial=true;product=Zn-binding domain-containing protein;pseudo=true;start_range=.,499154;transl_table=11 NZ_KK316846.1 RefSeq gene 499641 501992 . + . ID=gene-AL60_RS08060;Name=AL60_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08060;old_locus_tag=AL60_00487 NZ_KK316846.1 Protein Homology CDS 499641 501992 . + 0 ID=cds-WP_012054159.1;Parent=gene-AL60_RS08060;Dbxref=GenBank:WP_012054159.1;Name=WP_012054159.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177750.1;locus_tag=AL60_RS08060;product=PE family protein;protein_id=WP_012054159.1;transl_table=11 NZ_KK316846.1 RefSeq gene 502391 504796 . + . ID=gene-AL60_RS08065;Name=AL60_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08065;old_locus_tag=AL60_00488 NZ_KK316846.1 Protein Homology CDS 502391 504796 . + 0 ID=cds-WP_012054245.1;Parent=gene-AL60_RS08065;Dbxref=GenBank:WP_012054245.1;Name=WP_012054245.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177751.1;locus_tag=AL60_RS08065;product=PE family protein;protein_id=WP_012054245.1;transl_table=11 NZ_KK316846.1 RefSeq gene 504887 505144 . + . ID=gene-AL60_RS08070;Name=AL60_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08070;old_locus_tag=AL60_00489 NZ_KK316846.1 Protein Homology CDS 504887 505144 . + 0 ID=cds-WP_003403834.1;Parent=gene-AL60_RS08070;Dbxref=GenBank:WP_003403834.1;Name=WP_003403834.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215262.1;locus_tag=AL60_RS08070;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003403834.1;transl_table=11 NZ_KK316846.1 RefSeq gene 505168 505596 . + . ID=gene-AL60_RS08075;Name=AL60_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08075;old_locus_tag=AL60_00490 NZ_KK316846.1 Protein Homology CDS 505168 505596 . + 0 ID=cds-WP_003403837.1;Parent=gene-AL60_RS08075;Dbxref=GenBank:WP_003403837.1;Name=WP_003403837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215263.1;locus_tag=AL60_RS08075;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403837.1;transl_table=11 NZ_KK316846.1 RefSeq gene 505677 505814 . - . ID=gene-AL60_RS08080;Name=AL60_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08080;old_locus_tag=AL60_00491 NZ_KK316846.1 GeneMarkS-2+ CDS 505677 505814 . - 0 ID=cds-WP_003403839.1;Parent=gene-AL60_RS08080;Dbxref=GenBank:WP_003403839.1;Name=WP_003403839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS08080;product=hypothetical protein;protein_id=WP_003403839.1;transl_table=11 NZ_KK316846.1 RefSeq gene 505973 506218 . + . ID=gene-AL60_RS08085;Name=AL60_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08085;old_locus_tag=AL60_00492 NZ_KK316846.1 Protein Homology CDS 505973 506218 . + 0 ID=cds-WP_012054246.1;Parent=gene-AL60_RS08085;Dbxref=GenBank:WP_012054246.1;Name=WP_012054246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215264.1;locus_tag=AL60_RS08085;product=DUF7956 family protein;protein_id=WP_012054246.1;transl_table=11 NZ_KK316846.1 RefSeq gene 506287 507171 . - . ID=gene-AL60_RS08090;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=AL60_RS08090;old_locus_tag=AL60_00493 NZ_KK316846.1 Protein Homology CDS 506287 507171 . - 0 ID=cds-WP_003403844.1;Parent=gene-AL60_RS08090;Dbxref=GenBank:WP_003403844.1;Name=WP_003403844.1;Ontology_term=GO:0006574,GO:0008442,GO:0051287;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA,NAD binding|0051287||IEA;go_process=L-valine catabolic process|0006574||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215265.1;locus_tag=AL60_RS08090;product=3-hydroxyisobutyrate dehydrogenase;protein_id=WP_003403844.1;transl_table=11 NZ_KK316846.1 RefSeq gene 507182 508354 . - . ID=gene-AL60_RS08095;Name=AL60_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08095;old_locus_tag=AL60_00494 NZ_KK316846.1 Protein Homology CDS 507182 508354 . - 0 ID=cds-WP_003403845.1;Parent=gene-AL60_RS08095;Dbxref=GenBank:WP_003403845.1;Name=WP_003403845.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215266.1;locus_tag=AL60_RS08095;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003403845.1;transl_table=11 NZ_KK316846.1 RefSeq gene 508361 509893 . - . ID=gene-AL60_RS08100;Name=mmsA;gbkey=Gene;gene=mmsA;gene_biotype=protein_coding;locus_tag=AL60_RS08100;old_locus_tag=AL60_00495 NZ_KK316846.1 Protein Homology CDS 508361 509893 . - 0 ID=cds-WP_003403847.1;Parent=gene-AL60_RS08100;Dbxref=GenBank:WP_003403847.1;Name=WP_003403847.1;gbkey=CDS;gene=mmsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215267.1;locus_tag=AL60_RS08100;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_003403847.1;transl_table=11 NZ_KK316846.1 RefSeq gene 510099 511853 . + . ID=gene-AL60_RS08105;Name=AL60_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08105;old_locus_tag=AL60_00496 NZ_KK316846.1 Protein Homology CDS 510099 511853 . + 0 ID=cds-WP_003403850.1;Parent=gene-AL60_RS08105;Dbxref=GenBank:WP_003403850.1;Name=WP_003403850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177752.1;locus_tag=AL60_RS08105;product=phosphoglycerate mutase PE_PGRS11;protein_id=WP_003403850.1;transl_table=11 NZ_KK316846.1 RefSeq gene 512043 513980 . - . ID=gene-AL60_RS08110;Name=AL60_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08110;old_locus_tag=AL60_00497 NZ_KK316846.1 Protein Homology CDS 512043 513980 . - 0 ID=cds-WP_003898574.1;Parent=gene-AL60_RS08110;Dbxref=GenBank:WP_003898574.1;Name=WP_003898574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177753.1;locus_tag=AL60_RS08110;product=PPE family protein;protein_id=WP_003898574.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 514309 514467 . - . ID=gene-AL60_RS08115;Name=AL60_RS08115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS08115;old_locus_tag=AL60_00498;partial=true;pseudo=true;start_range=.,514309 NZ_KK316846.1 Protein Homology CDS 514309 514467 . - 0 ID=cds-AL60_RS08115;Parent=gene-AL60_RS08115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010948855.1;locus_tag=AL60_RS08115;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,514309;transl_table=11 NZ_KK316846.1 RefSeq gene 514582 514653 . - . ID=gene-AL60_RS08120;Name=AL60_RS08120;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS08120;old_locus_tag=AL60_00499 NZ_KK316846.1 tRNAscan-SE tRNA 514582 514653 . - . ID=rna-AL60_RS08120;Parent=gene-AL60_RS08120;anticodon=(pos:complement(514619..514621));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS08120;product=tRNA-Thr NZ_KK316846.1 tRNAscan-SE exon 514582 514653 . - . ID=exon-AL60_RS08120-1;Parent=rna-AL60_RS08120;anticodon=(pos:complement(514619..514621));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS08120;product=tRNA-Thr NZ_KK316846.1 RefSeq gene 514681 515406 . - . ID=gene-AL60_RS08125;Name=AL60_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08125;old_locus_tag=AL60_00500 NZ_KK316846.1 Protein Homology CDS 514681 515406 . - 0 ID=cds-WP_003403862.1;Parent=gene-AL60_RS08125;Dbxref=GenBank:WP_003403862.1;Name=WP_003403862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215270.1;locus_tag=AL60_RS08125;product=hypothetical protein;protein_id=WP_003403862.1;transl_table=11 NZ_KK316846.1 RefSeq gene 515548 516291 . + . ID=gene-AL60_RS08130;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=AL60_RS08130;old_locus_tag=AL60_00501 NZ_KK316846.1 Protein Homology CDS 515548 516291 . + 0 ID=cds-WP_003403867.1;Parent=gene-AL60_RS08130;Dbxref=GenBank:WP_003403867.1;Name=WP_003403867.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215271.1;locus_tag=AL60_RS08130;product=two-component system response regulator PhoP;protein_id=WP_003403867.1;transl_table=11 NZ_KK316846.1 RefSeq gene 516336 517793 . + . ID=gene-AL60_RS08135;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=AL60_RS08135;old_locus_tag=AL60_00502 NZ_KK316846.1 Protein Homology CDS 516336 517793 . + 0 ID=cds-WP_003898576.1;Parent=gene-AL60_RS08135;Dbxref=GenBank:WP_003898576.1;Name=WP_003898576.1;gbkey=CDS;gene=phoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215272.1;locus_tag=AL60_RS08135;product=sensory box histidine kinase PhoR;protein_id=WP_003898576.1;transl_table=11 NZ_KK316846.1 RefSeq gene 517765 518166 . - . ID=gene-AL60_RS08140;Name=AL60_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08140;old_locus_tag=AL60_00503 NZ_KK316846.1 Protein Homology CDS 517765 518166 . - 0 ID=cds-WP_003403876.1;Parent=gene-AL60_RS08140;Dbxref=GenBank:WP_003403876.1;Name=WP_003403876.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403876.1;locus_tag=AL60_RS08140;product=HIT family protein;protein_id=WP_003403876.1;transl_table=11 NZ_KK316846.1 RefSeq gene 518207 518626 . - . ID=gene-AL60_RS08145;Name=AL60_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08145;old_locus_tag=AL60_00504 NZ_KK316846.1 Protein Homology CDS 518207 518626 . - 0 ID=cds-WP_003403880.1;Parent=gene-AL60_RS08145;Dbxref=GenBank:WP_003403880.1;Name=WP_003403880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215274.1;locus_tag=AL60_RS08145;product=ketosteroid isomerase family protein;protein_id=WP_003403880.1;transl_table=11 NZ_KK316846.1 RefSeq gene 518639 519766 . - . ID=gene-AL60_RS08150;Name=adhB;gbkey=Gene;gene=adhB;gene_biotype=protein_coding;locus_tag=AL60_RS08150;old_locus_tag=AL60_00505 NZ_KK316846.1 Protein Homology CDS 518639 519766 . - 0 ID=cds-WP_003403885.1;Parent=gene-AL60_RS08150;Dbxref=GenBank:WP_003403885.1;Name=WP_003403885.1;gbkey=CDS;gene=adhB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177754.1;locus_tag=AL60_RS08150;product=NDMA-dependent alcohol dehydrogenase;protein_id=WP_003403885.1;transl_table=11 NZ_KK316846.1 RefSeq gene 519865 520410 . - . ID=gene-AL60_RS08155;Name=AL60_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08155;old_locus_tag=AL60_00506 NZ_KK316846.1 Protein Homology CDS 519865 520410 . - 0 ID=cds-WP_003403887.1;Parent=gene-AL60_RS08155;Dbxref=GenBank:WP_003403887.1;Name=WP_003403887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215276.1;locus_tag=AL60_RS08155;product=Cif family virulence factor;protein_id=WP_003403887.1;transl_table=11 NZ_KK316846.1 RefSeq gene 520413 520619 . - . ID=gene-AL60_RS08160;Name=AL60_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08160;old_locus_tag=AL60_00507 NZ_KK316846.1 Protein Homology CDS 520413 520619 . - 0 ID=cds-WP_003403890.1;Parent=gene-AL60_RS08160;Dbxref=GenBank:WP_003403890.1;Name=WP_003403890.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215277.1;locus_tag=AL60_RS08160;product=ferredoxin;protein_id=WP_003403890.1;transl_table=11 NZ_KK316846.1 RefSeq gene 520622 521977 . - . ID=gene-AL60_RS08165;Name=cyp51;gbkey=Gene;gene=cyp51;gene_biotype=protein_coding;locus_tag=AL60_RS08165;old_locus_tag=AL60_00508 NZ_KK316846.1 Protein Homology CDS 520622 521977 . - 0 ID=cds-WP_003898577.1;Parent=gene-AL60_RS08165;Dbxref=GenBank:WP_003898577.1;Name=WP_003898577.1;gbkey=CDS;gene=cyp51;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215278.1;locus_tag=AL60_RS08165;product=lanosterol 14-alpha demethylase;protein_id=WP_003898577.1;transl_table=11 NZ_KK316846.1 RefSeq gene 521977 522804 . - . ID=gene-AL60_RS08170;Name=AL60_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08170;old_locus_tag=AL60_00509 NZ_KK316846.1 Protein Homology CDS 521977 522804 . - 0 ID=cds-WP_003898578.1;Parent=gene-AL60_RS08170;Dbxref=GenBank:WP_003898578.1;Name=WP_003898578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215279.1;locus_tag=AL60_RS08170;product=SDR family oxidoreductase;protein_id=WP_003898578.1;transl_table=11 NZ_KK316846.1 RefSeq gene 522804 524012 . - . ID=gene-AL60_RS08175;Name=AL60_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08175;old_locus_tag=AL60_00510 NZ_KK316846.1 Protein Homology CDS 522804 524012 . - 0 ID=cds-WP_003403911.1;Parent=gene-AL60_RS08175;Dbxref=GenBank:WP_003403911.1;Name=WP_003403911.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215280.1;locus_tag=AL60_RS08175;product=cytochrome P450;protein_id=WP_003403911.1;transl_table=11 NZ_KK316846.1 RefSeq gene 524009 524650 . - . ID=gene-AL60_RS08180;Name=AL60_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08180;old_locus_tag=AL60_00511 NZ_KK316846.1 Protein Homology CDS 524009 524650 . - 0 ID=cds-WP_003403915.1;Parent=gene-AL60_RS08180;Dbxref=GenBank:WP_003403915.1;Name=WP_003403915.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215281.1;locus_tag=AL60_RS08180;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403915.1;transl_table=11 NZ_KK316846.1 RefSeq gene 524852 526321 . + . ID=gene-AL60_RS08185;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=AL60_RS08185;old_locus_tag=AL60_00512 NZ_KK316846.1 Protein Homology CDS 524852 526321 . + 0 ID=cds-WP_003403919.1;Parent=gene-AL60_RS08185;Dbxref=GenBank:WP_003403919.1;Name=WP_003403919.1;Ontology_term=GO:0016903;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215282.1;locus_tag=AL60_RS08185;product=aldehyde dehydrogenase;protein_id=WP_003403919.1;transl_table=11 NZ_KK316846.1 RefSeq gene 526352 527098 . + . ID=gene-AL60_RS08190;Name=AL60_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08190;old_locus_tag=AL60_00513 NZ_KK316846.1 Protein Homology CDS 526352 527098 . + 0 ID=cds-WP_003898579.1;Parent=gene-AL60_RS08190;Dbxref=GenBank:WP_003898579.1;Name=WP_003898579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215283.1;locus_tag=AL60_RS08190;product=SDR family oxidoreductase;protein_id=WP_003898579.1;transl_table=11 NZ_KK316846.1 RefSeq gene 527196 528083 . + . ID=gene-AL60_RS08195;Name=AL60_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08195;old_locus_tag=AL60_00514 NZ_KK316846.1 Protein Homology CDS 527196 528083 . + 0 ID=cds-WP_003403924.1;Parent=gene-AL60_RS08195;Dbxref=GenBank:WP_003403924.1;Name=WP_003403924.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215284.1;locus_tag=AL60_RS08195;product=NAD(P)-dependent oxidoreductase;protein_id=WP_003403924.1;transl_table=11 NZ_KK316846.1 RefSeq gene 528080 528514 . + . ID=gene-AL60_RS08200;Name=AL60_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08200;old_locus_tag=AL60_00515 NZ_KK316846.1 Protein Homology CDS 528080 528514 . + 0 ID=cds-WP_003403928.1;Parent=gene-AL60_RS08200;Dbxref=GenBank:WP_003403928.1;Name=WP_003403928.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215285.1;locus_tag=AL60_RS08200;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003403928.1;transl_table=11 NZ_KK316846.1 RefSeq gene 528526 529794 . + . ID=gene-AL60_RS08205;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=AL60_RS08205;old_locus_tag=AL60_00516 NZ_KK316846.1 Protein Homology CDS 528526 529794 . + 0 ID=cds-WP_003898580.1;Parent=gene-AL60_RS08205;Dbxref=GenBank:WP_003898580.1;Name=WP_003898580.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215286.1;locus_tag=AL60_RS08205;product=phosphoribosylamine--glycine ligase;protein_id=WP_003898580.1;transl_table=11 NZ_KK316846.1 RefSeq gene 529791 531374 . - . ID=gene-AL60_RS08210;Name=ggtA;gbkey=Gene;gene=ggtA;gene_biotype=protein_coding;locus_tag=AL60_RS08210;old_locus_tag=AL60_00517 NZ_KK316846.1 Protein Homology CDS 529791 531374 . - 0 ID=cds-WP_003911281.1;Parent=gene-AL60_RS08210;Dbxref=GenBank:WP_003911281.1;Name=WP_003911281.1;gbkey=CDS;gene=ggtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918129.1;locus_tag=AL60_RS08210;product=gamma-glutamyltranspeptidase GgtA;protein_id=WP_003911281.1;transl_table=11 NZ_KK316846.1 RefSeq gene 531380 532291 . - . ID=gene-AL60_RS08215;Name=AL60_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08215;old_locus_tag=AL60_00518 NZ_KK316846.1 Protein Homology CDS 531380 532291 . - 0 ID=cds-WP_003403938.1;Parent=gene-AL60_RS08215;Dbxref=GenBank:WP_003403938.1;Name=WP_003403938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215288.2;locus_tag=AL60_RS08215;product=iron-stress inducible esterase;protein_id=WP_003403938.1;transl_table=11 NZ_KK316846.1 RefSeq gene 532347 532970 . + . ID=gene-AL60_RS08220;Name=AL60_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08220;old_locus_tag=AL60_00519 NZ_KK316846.1 Protein Homology CDS 532347 532970 . + 0 ID=cds-WP_003403945.1;Parent=gene-AL60_RS08220;Dbxref=GenBank:WP_003403945.1;Name=WP_003403945.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215289.1;locus_tag=AL60_RS08220;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403945.1;transl_table=11 NZ_KK316846.1 RefSeq gene 532924 533703 . - . ID=gene-AL60_RS08225;Name=AL60_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08225;old_locus_tag=AL60_00520 NZ_KK316846.1 Protein Homology CDS 532924 533703 . - 0 ID=cds-WP_003403949.1;Parent=gene-AL60_RS08225;Dbxref=GenBank:WP_003403949.1;Name=WP_003403949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215290.1;locus_tag=AL60_RS08225;product=DUF429 domain-containing protein;protein_id=WP_003403949.1;transl_table=11 NZ_KK316846.1 RefSeq gene 533948 535366 . + . ID=gene-AL60_RS08230;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AL60_RS08230;old_locus_tag=AL60_00521 NZ_KK316846.1 Protein Homology CDS 533948 535366 . + 0 ID=cds-WP_003898583.1;Parent=gene-AL60_RS08230;Dbxref=GenBank:WP_003898583.1;Name=WP_003898583.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215291.1;locus_tag=AL60_RS08230;product=adenylosuccinate lyase;protein_id=WP_003898583.1;transl_table=11 NZ_KK316846.1 RefSeq gene 535371 536615 . + . ID=gene-AL60_RS08235;Name=AL60_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08235;old_locus_tag=AL60_00522 NZ_KK316846.1 Protein Homology CDS 535371 536615 . + 0 ID=cds-WP_003898584.1;Parent=gene-AL60_RS08235;Dbxref=GenBank:WP_003898584.1;Name=WP_003898584.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215292.1;locus_tag=AL60_RS08235;product=cytochrome P450;protein_id=WP_003898584.1;transl_table=11 NZ_KK316846.1 RefSeq gene 536612 537232 . - . ID=gene-AL60_RS08240;Name=AL60_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08240;old_locus_tag=AL60_00523 NZ_KK316846.1 Protein Homology CDS 536612 537232 . - 0 ID=cds-WP_003403957.1;Parent=gene-AL60_RS08240;Dbxref=GenBank:WP_003403957.1;Name=WP_003403957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215293.1;locus_tag=AL60_RS08240;product=hypothetical protein;protein_id=WP_003403957.1;transl_table=11 NZ_KK316846.1 RefSeq gene 537283 538176 . + . ID=gene-AL60_RS08245;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=AL60_RS08245;old_locus_tag=AL60_00524 NZ_KK316846.1 Protein Homology CDS 537283 538176 . + 0 ID=cds-WP_003403962.1;Parent=gene-AL60_RS08245;Dbxref=GenBank:WP_003403962.1;Name=WP_003403962.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215294.1;locus_tag=AL60_RS08245;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_003403962.1;transl_table=11 NZ_KK316846.1 RefSeq gene 538173 540332 . + . ID=gene-AL60_RS08250;Name=AL60_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08250;old_locus_tag=AL60_00525 NZ_KK316846.1 Protein Homology CDS 538173 540332 . + 0 ID=cds-WP_003898586.1;Parent=gene-AL60_RS08250;Dbxref=GenBank:WP_003898586.1;Name=WP_003898586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915458.1;locus_tag=AL60_RS08250;product=S9 family peptidase;protein_id=WP_003898586.1;transl_table=11 NZ_KK316846.1 RefSeq gene 540378 540512 . + . ID=gene-AL60_RS27815;Name=AL60_RS27815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27815 NZ_KK316846.1 Protein Homology CDS 540378 540512 . + 0 ID=cds-WP_003403972.1;Parent=gene-AL60_RS27815;Dbxref=GenBank:WP_003403972.1;Name=WP_003403972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403972.1;locus_tag=AL60_RS27815;product=hypothetical protein;protein_id=WP_003403972.1;transl_table=11 NZ_KK316846.1 RefSeq gene 540631 540771 . + . ID=gene-AL60_RS0104225;Name=AL60_RS0104225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104225 NZ_KK316846.1 Protein Homology CDS 540631 540771 . + 0 ID=cds-WP_003403974.1;Parent=gene-AL60_RS0104225;Dbxref=GenBank:WP_003403974.1;Name=WP_003403974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403974.1;locus_tag=AL60_RS0104225;product=WHG domain-containing protein;protein_id=WP_003403974.1;transl_table=11 NZ_KK316846.1 RefSeq gene 540760 542382 . - . ID=gene-AL60_RS08255;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AL60_RS08255;old_locus_tag=AL60_00526 NZ_KK316846.1 Protein Homology CDS 540760 542382 . - 0 ID=cds-WP_003403977.1;Parent=gene-AL60_RS08255;Dbxref=GenBank:WP_003403977.1;Name=WP_003403977.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215297.1;locus_tag=AL60_RS08255;product=MFS transporter;protein_id=WP_003403977.1;transl_table=11 NZ_KK316846.1 RefSeq gene 542562 543266 . + . ID=gene-AL60_RS08260;Name=AL60_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08260;old_locus_tag=AL60_00527 NZ_KK316846.1 Protein Homology CDS 542562 543266 . + 0 ID=cds-WP_003403980.1;Parent=gene-AL60_RS08260;Dbxref=GenBank:WP_003403980.1;Name=WP_003403980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403980.1;locus_tag=AL60_RS08260;product=DUF2334 domain-containing protein;protein_id=WP_003403980.1;transl_table=11 NZ_KK316846.1 RefSeq gene 543282 544982 . + . ID=gene-AL60_RS08265;Name=AL60_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08265;old_locus_tag=AL60_00528 NZ_KK316846.1 Protein Homology CDS 543282 544982 . + 0 ID=cds-WP_003898590.1;Parent=gene-AL60_RS08265;Dbxref=GenBank:WP_003898590.1;Name=WP_003898590.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215299.1;locus_tag=AL60_RS08265;product=FAD-binding dehydrogenase;protein_id=WP_003898590.1;transl_table=11 NZ_KK316846.1 RefSeq gene 545017 545655 . - . ID=gene-AL60_RS08270;Name=AL60_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08270;old_locus_tag=AL60_00529 NZ_KK316846.1 Protein Homology CDS 545017 545655 . - 0 ID=cds-WP_003403989.1;Parent=gene-AL60_RS08270;Dbxref=GenBank:WP_003403989.1;Name=WP_003403989.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215300.2;locus_tag=AL60_RS08270;product=MBL fold metallo-hydrolase;protein_id=WP_003403989.1;transl_table=11 NZ_KK316846.1 RefSeq gene 545569 546360 . + . ID=gene-AL60_RS0104230;Name=AL60_RS0104230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104230;old_locus_tag=AL60_00530 NZ_KK316846.1 Protein Homology CDS 545569 546360 . + 0 ID=cds-WP_021036368.1;Parent=gene-AL60_RS0104230;Dbxref=GenBank:WP_021036368.1;Name=WP_021036368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584682.1;locus_tag=AL60_RS0104230;product=hypothetical protein;protein_id=WP_021036368.1;transl_table=11 NZ_KK316846.1 RefSeq gene 546466 546705 . + . ID=gene-AL60_RS08275;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=AL60_RS08275;old_locus_tag=AL60_00531 NZ_KK316846.1 Protein Homology CDS 546466 546705 . + 0 ID=cds-WP_003403993.1;Parent=gene-AL60_RS08275;Dbxref=GenBank:WP_003403993.1;Name=WP_003403993.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177755.1;locus_tag=AL60_RS08275;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_003403993.1;transl_table=11 NZ_KK316846.1 RefSeq gene 546702 547376 . + . ID=gene-AL60_RS08280;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=AL60_RS08280;old_locus_tag=AL60_00532 NZ_KK316846.1 Protein Homology CDS 546702 547376 . + 0 ID=cds-WP_003403995.1;Parent=gene-AL60_RS08280;Dbxref=GenBank:WP_003403995.1;Name=WP_003403995.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215303.1;locus_tag=AL60_RS08280;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_003403995.1;transl_table=11 NZ_KK316846.1 RefSeq gene 547393 547866 . - . ID=gene-AL60_RS0104235;Name=AL60_RS0104235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104235;old_locus_tag=AL60_00533 NZ_KK316846.1 Protein Homology CDS 547393 547866 . - 0 ID=cds-WP_014584683.1;Parent=gene-AL60_RS0104235;Dbxref=GenBank:WP_014584683.1;Name=WP_014584683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584683.1;locus_tag=AL60_RS0104235;product=hypothetical protein;protein_id=WP_014584683.1;transl_table=11 NZ_KK316846.1 RefSeq gene 548014 548742 . - . ID=gene-AL60_RS08285;Name=AL60_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08285;old_locus_tag=AL60_00534 NZ_KK316846.1 Protein Homology CDS 548014 548742 . - 0 ID=cds-WP_003404002.1;Parent=gene-AL60_RS08285;Dbxref=GenBank:WP_003404002.1;Name=WP_003404002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215305.1;locus_tag=AL60_RS08285;product=transglutaminase-like domain-containing protein;protein_id=WP_003404002.1;transl_table=11 NZ_KK316846.1 RefSeq gene 548739 549782 . - . ID=gene-AL60_RS08290;Name=AL60_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08290;old_locus_tag=AL60_00535 NZ_KK316846.1 Protein Homology CDS 548739 549782 . - 0 ID=cds-WP_003906447.1;Parent=gene-AL60_RS08290;Dbxref=GenBank:WP_003906447.1;Name=WP_003906447.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215306.1;locus_tag=AL60_RS08290;product=TIGR03619 family F420-dependent LLM class oxidoreductase;protein_id=WP_003906447.1;transl_table=11 NZ_KK316846.1 RefSeq gene 549779 550588 . - . ID=gene-AL60_RS08295;Name=AL60_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08295;old_locus_tag=AL60_00536 NZ_KK316846.1 Protein Homology CDS 549779 550588 . - 0 ID=cds-WP_003404007.1;Parent=gene-AL60_RS08295;Dbxref=GenBank:WP_003404007.1;Name=WP_003404007.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215307.1;locus_tag=AL60_RS08295;product=Rv0792c family HTH-type transcriptional regulator;protein_id=WP_003404007.1;transl_table=11 NZ_KK316846.1 RefSeq gene 550661 550966 . + . ID=gene-AL60_RS08300;Name=AL60_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08300;old_locus_tag=AL60_00537 NZ_KK316846.1 Protein Homology CDS 550661 550966 . + 0 ID=cds-WP_003404010.1;Parent=gene-AL60_RS08300;Dbxref=GenBank:WP_003404010.1;Name=WP_003404010.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215308.1;locus_tag=AL60_RS08300;product=putative quinol monooxygenase;protein_id=WP_003404010.1;transl_table=11 NZ_KK316846.1 RefSeq gene 551079 552578 . - . ID=gene-AL60_RS08305;Name=AL60_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08305;old_locus_tag=AL60_00538 NZ_KK316846.1 Protein Homology CDS 551079 552578 . - 0 ID=cds-WP_003404013.1;Parent=gene-AL60_RS08305;Dbxref=GenBank:WP_003404013.1;Name=WP_003404013.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177756.1;locus_tag=AL60_RS08305;product=dihydrolipoyl dehydrogenase family protein;protein_id=WP_003404013.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 552971 554044 . + . ID=gene-AL60_RS08310;Name=AL60_RS08310;end_range=554044,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS08310;old_locus_tag=AL60_00539;partial=true;pseudo=true NZ_KK316846.1 Protein Homology CDS 552971 554044 . + 0 ID=cds-AL60_RS08310;Parent=gene-AL60_RS08310;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=554044,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217844.1;locus_tag=AL60_RS08310;partial=true;product=IS110-like element IS1547 family transposase;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 554055 554852 . - . ID=gene-AL60_RS08315;Name=AL60_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08315;old_locus_tag=AL60_00540 NZ_KK316846.1 Protein Homology CDS 554055 554852 . - 0 ID=cds-WP_003404092.1;Parent=gene-AL60_RS08315;Dbxref=GenBank:WP_003404092.1;Name=WP_003404092.1;Ontology_term=GO:0140737;gbkey=CDS;go_component=encapsulin nanocompartment|0140737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215313.1;locus_tag=AL60_RS08315;product=family 1 encapsulin nanocompartment shell protein;protein_id=WP_003404092.1;transl_table=11 NZ_KK316846.1 RefSeq gene 554849 555856 . - . ID=gene-AL60_RS08320;Name=AL60_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08320;old_locus_tag=AL60_00541 NZ_KK316846.1 Protein Homology CDS 554849 555856 . - 0 ID=cds-WP_003404098.1;Parent=gene-AL60_RS08320;Dbxref=GenBank:WP_003404098.1;Name=WP_003404098.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215314.1;locus_tag=AL60_RS08320;product=Dyp-type peroxidase;protein_id=WP_003404098.1;transl_table=11 NZ_KK316846.1 RefSeq gene 555901 557202 . + . ID=gene-AL60_RS08325;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=AL60_RS08325;old_locus_tag=AL60_00542 NZ_KK316846.1 Protein Homology CDS 555901 557202 . + 0 ID=cds-WP_003404103.1;Parent=gene-AL60_RS08325;Dbxref=GenBank:WP_003404103.1;Name=WP_003404103.1;Ontology_term=GO:0006508,GO:0004177,GO:0008270;gbkey=CDS;gene=pepC;go_function=aminopeptidase activity|0004177||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215315.1;locus_tag=AL60_RS08325;product=M18 family aminopeptidase;protein_id=WP_003404103.1;transl_table=11 NZ_KK316846.1 RefSeq gene 557214 557561 . + . ID=gene-AL60_RS08330;Name=AL60_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08330;old_locus_tag=AL60_00543 NZ_KK316846.1 Protein Homology CDS 557214 557561 . + 0 ID=cds-WP_003898592.1;Parent=gene-AL60_RS08330;Dbxref=GenBank:WP_003898592.1;Name=WP_003898592.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215316.1;locus_tag=AL60_RS08330;product=VOC family protein;protein_id=WP_003898592.1;transl_table=11 NZ_KK316846.1 RefSeq gene 557555 558211 . - . ID=gene-AL60_RS08335;Name=AL60_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08335;old_locus_tag=AL60_00544 NZ_KK316846.1 Protein Homology CDS 557555 558211 . - 0 ID=cds-WP_003404111.1;Parent=gene-AL60_RS08335;Dbxref=GenBank:WP_003404111.1;Name=WP_003404111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215317.1;locus_tag=AL60_RS08335;product=acetyl-/succinyl-CoA transferase;protein_id=WP_003404111.1;transl_table=11 NZ_KK316846.1 RefSeq gene 558403 560667 . + . ID=gene-AL60_RS08340;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=AL60_RS08340;old_locus_tag=AL60_00545 NZ_KK316846.1 Protein Homology CDS 558403 560667 . + 0 ID=cds-WP_003404114.1;Parent=gene-AL60_RS08340;Dbxref=GenBank:WP_003404114.1;Name=WP_003404114.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215318.1;locus_tag=AL60_RS08340;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_003404114.1;transl_table=11 NZ_KK316846.1 RefSeq gene 560664 561293 . + . ID=gene-AL60_RS08345;Name=AL60_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08345;old_locus_tag=AL60_00546 NZ_KK316846.1 Protein Homology CDS 560664 561293 . + 0 ID=cds-WP_003404117.1;Parent=gene-AL60_RS08345;Dbxref=GenBank:WP_003404117.1;Name=WP_003404117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215319.1;locus_tag=AL60_RS08345;product=Rv0804 family intramembrane glutamic endopeptidase;protein_id=WP_003404117.1;transl_table=11 NZ_KK316846.1 RefSeq gene 561414 562370 . + . ID=gene-AL60_RS08350;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=AL60_RS08350;old_locus_tag=AL60_00547 NZ_KK316846.1 Protein Homology CDS 561414 562370 . + 0 ID=cds-WP_003404120.1;Parent=gene-AL60_RS08350;Dbxref=GenBank:WP_003404120.1;Name=WP_003404120.1;gbkey=CDS;gene=cpdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215320.1;locus_tag=AL60_RS08350;product=3'%2C5'-cyclic adenosine monophosphate phosphodiesterase CpdA;protein_id=WP_003404120.1;transl_table=11 NZ_KK316846.1 RefSeq gene 562315 563913 . - . ID=gene-AL60_RS08355;Name=cpsY;gbkey=Gene;gene=cpsY;gene_biotype=protein_coding;locus_tag=AL60_RS08355;old_locus_tag=AL60_00548 NZ_KK316846.1 Protein Homology CDS 562315 563913 . - 0 ID=cds-WP_003898594.1;Parent=gene-AL60_RS08355;Dbxref=GenBank:WP_003898594.1;Name=WP_003898594.1;gbkey=CDS;gene=cpsY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215321.1;locus_tag=AL60_RS08355;product=stealth family protein;protein_id=WP_003898594.1;transl_table=11 NZ_KK316846.1 RefSeq gene 564218 564607 . + . ID=gene-AL60_RS08360;Name=AL60_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08360;old_locus_tag=AL60_00549 NZ_KK316846.1 Protein Homology CDS 564218 564607 . + 0 ID=cds-WP_003404127.1;Parent=gene-AL60_RS08360;Dbxref=GenBank:WP_003404127.1;Name=WP_003404127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215322.1;locus_tag=AL60_RS08360;product=sterol carrier family protein;protein_id=WP_003404127.1;transl_table=11 NZ_KK316846.1 RefSeq gene 564748 566277 . + . ID=gene-AL60_RS08365;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AL60_RS08365;old_locus_tag=AL60_00550 NZ_KK316846.1 Protein Homology CDS 564748 566277 . + 0 ID=cds-WP_003911290.1;Parent=gene-AL60_RS08365;Dbxref=GenBank:WP_003911290.1;Name=WP_003911290.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911290.1;locus_tag=AL60_RS08365;product=amidophosphoribosyltransferase;protein_id=WP_003911290.1;transl_table=11 NZ_KK316846.1 RefSeq gene 566308 567402 . + . ID=gene-AL60_RS08370;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AL60_RS08370;old_locus_tag=AL60_00551 NZ_KK316846.1 Protein Homology CDS 566308 567402 . + 0 ID=cds-WP_003404132.1;Parent=gene-AL60_RS08370;Dbxref=GenBank:WP_003404132.1;Name=WP_003404132.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215324.1;locus_tag=AL60_RS08370;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_003404132.1;transl_table=11 NZ_KK316846.1 RefSeq gene 567488 567670 . - . ID=gene-AL60_RS08375;Name=AL60_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08375;old_locus_tag=AL60_00552 NZ_KK316846.1 Protein Homology CDS 567488 567670 . - 0 ID=cds-WP_003404135.1;Parent=gene-AL60_RS08375;Dbxref=GenBank:WP_003404135.1;Name=WP_003404135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007777661.1;locus_tag=AL60_RS08375;product=DUF3073 domain-containing protein;protein_id=WP_003404135.1;transl_table=11 NZ_KK316846.1 RefSeq gene 567817 568923 . - . ID=gene-AL60_RS08380;Name=AL60_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08380;old_locus_tag=AL60_00553 NZ_KK316846.1 Protein Homology CDS 567817 568923 . - 0 ID=cds-WP_003404137.1;Parent=gene-AL60_RS08380;Dbxref=GenBank:WP_003404137.1;Name=WP_003404137.1;Ontology_term=GO:0016226,GO:0016740,GO:0005739;gbkey=CDS;go_component=mitochondrion|0005739||IEA;go_function=transferase activity|0016740||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215326.1;locus_tag=AL60_RS08380;product=CAF17-like 4Fe-4S cluster assembly/insertion protein YgfZ;protein_id=WP_003404137.1;transl_table=11 NZ_KK316846.1 RefSeq gene 569006 569875 . + . ID=gene-AL60_RS08385;Name=AL60_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08385;old_locus_tag=AL60_00554 NZ_KK316846.1 Protein Homology CDS 569006 569875 . + 0 ID=cds-WP_003404139.1;Parent=gene-AL60_RS08385;Dbxref=GenBank:WP_003404139.1;Name=WP_003404139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177757.1;locus_tag=AL60_RS08385;product=aminodeoxychorismate lyase;protein_id=WP_003404139.1;transl_table=11 NZ_KK316846.1 RefSeq gene 569921 570601 . - . ID=gene-AL60_RS08390;Name=AL60_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08390;old_locus_tag=AL60_00555 NZ_KK316846.1 Protein Homology CDS 569921 570601 . - 0 ID=cds-WP_003898596.1;Parent=gene-AL60_RS08390;Dbxref=GenBank:WP_003898596.1;Name=WP_003898596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215328.1;locus_tag=AL60_RS08390;product=nitrobindin family protein;protein_id=WP_003898596.1;transl_table=11 NZ_KK316846.1 RefSeq gene 570764 571066 . - . ID=gene-AL60_RS08395;Name=AL60_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08395;old_locus_tag=AL60_00556 NZ_KK316846.1 Protein Homology CDS 570764 571066 . - 0 ID=cds-WP_003404278.1;Parent=gene-AL60_RS08395;Dbxref=GenBank:WP_003404278.1;Name=WP_003404278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215329.1;locus_tag=AL60_RS08395;product=DUF1416 domain-containing protein;protein_id=WP_003404278.1;transl_table=11 NZ_KK316846.1 RefSeq gene 571068 571901 . - . ID=gene-AL60_RS08400;Name=AL60_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08400;old_locus_tag=AL60_00557 NZ_KK316846.1 Protein Homology CDS 571068 571901 . - 0 ID=cds-WP_003404293.1;Parent=gene-AL60_RS08400;Dbxref=GenBank:WP_003404293.1;Name=WP_003404293.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215330.1;locus_tag=AL60_RS08400;product=sulfurtransferase;protein_id=WP_003404293.1;transl_table=11 NZ_KK316846.1 RefSeq gene 572075 572188 . - . ID=gene-AL60_RS27885;Name=AL60_RS27885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27885 NZ_KK316846.1 Protein Homology CDS 572075 572188 . - 0 ID=cds-WP_349814712.1;Parent=gene-AL60_RS27885;Dbxref=GenBank:WP_349814712.1;Name=WP_349814712.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042933.1;locus_tag=AL60_RS27885;product=Ms5788A family Cys-rich leader peptide;protein_id=WP_349814712.1;transl_table=11 NZ_KK316846.1 RefSeq gene 572194 572616 . - . ID=gene-AL60_RS08405;Name=thiX;gbkey=Gene;gene=thiX;gene_biotype=protein_coding;locus_tag=AL60_RS08405;old_locus_tag=AL60_00558 NZ_KK316846.1 Protein Homology CDS 572194 572616 . - 0 ID=cds-WP_003898598.1;Parent=gene-AL60_RS08405;Dbxref=GenBank:WP_003898598.1;Name=WP_003898598.1;Ontology_term=GO:0015035;gbkey=CDS;gene=thiX;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215331.1;locus_tag=AL60_RS08405;product=thioredoxin family protein;protein_id=WP_003898598.1;transl_table=11 NZ_KK316846.1 RefSeq gene 572613 573425 . - . ID=gene-AL60_RS08410;Name=lmeA;gbkey=Gene;gene=lmeA;gene_biotype=protein_coding;locus_tag=AL60_RS08410;old_locus_tag=AL60_00559 NZ_KK316846.1 Protein Homology CDS 572613 573425 . - 0 ID=cds-WP_003404298.1;Parent=gene-AL60_RS08410;Dbxref=GenBank:WP_003404298.1;Name=WP_003404298.1;gbkey=CDS;gene=lmeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215332.1;locus_tag=AL60_RS08410;product=mannan chain length control protein LmeA;protein_id=WP_003404298.1;transl_table=11 NZ_KK316846.1 RefSeq gene 573555 574322 . + . ID=gene-AL60_RS08415;Name=AL60_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08415;old_locus_tag=AL60_00560 NZ_KK316846.1 Protein Homology CDS 573555 574322 . + 0 ID=cds-WP_003898599.1;Parent=gene-AL60_RS08415;Dbxref=GenBank:WP_003898599.1;Name=WP_003898599.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215333.1;locus_tag=AL60_RS08415;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_003898599.1;transl_table=11 NZ_KK316846.1 RefSeq gene 574319 575266 . + . ID=gene-AL60_RS08420;Name=mshD;gbkey=Gene;gene=mshD;gene_biotype=protein_coding;locus_tag=AL60_RS08420;old_locus_tag=AL60_00561 NZ_KK316846.1 Protein Homology CDS 574319 575266 . + 0 ID=cds-WP_003404307.1;Parent=gene-AL60_RS08420;Dbxref=GenBank:WP_003404307.1;Name=WP_003404307.1;Ontology_term=GO:0010125,GO:0035447;gbkey=CDS;gene=mshD;go_function=mycothiol synthase activity|0035447||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215334.1;locus_tag=AL60_RS08420;product=mycothiol synthase;protein_id=WP_003404307.1;transl_table=11 NZ_KK316846.1 RefSeq gene 575309 576085 . + . ID=gene-AL60_RS08425;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AL60_RS08425;old_locus_tag=AL60_00562 NZ_KK316846.1 Protein Homology CDS 575309 576085 . + 0 ID=cds-WP_003404312.1;Parent=gene-AL60_RS08425;Dbxref=GenBank:WP_003404312.1;Name=WP_003404312.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215335.1;locus_tag=AL60_RS08425;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_003404312.1;transl_table=11 NZ_KK316846.1 RefSeq gene 576141 576782 . - . ID=gene-AL60_RS08430;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AL60_RS08430;old_locus_tag=AL60_00563 NZ_KK316846.1 Protein Homology CDS 576141 576782 . - 0 ID=cds-WP_003404314.1;Parent=gene-AL60_RS08430;Dbxref=GenBank:WP_003404314.1;Name=WP_003404314.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215336.1;locus_tag=AL60_RS08430;product=phosphate signaling complex protein PhoU;protein_id=WP_003404314.1;transl_table=11 NZ_KK316846.1 RefSeq gene 576840 578894 . - . ID=gene-AL60_RS08435;Name=AL60_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08435;old_locus_tag=AL60_00564 NZ_KK316846.1 Protein Homology CDS 576840 578894 . - 0 ID=cds-WP_003898600.1;Parent=gene-AL60_RS08435;Dbxref=GenBank:WP_003898600.1;Name=WP_003898600.1;Ontology_term=GO:0070726,GO:0071555,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=cell wall assembly|0070726||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215337.1;locus_tag=AL60_RS08435;product=LCP family protein;protein_id=WP_003898600.1;transl_table=11 NZ_KK316846.1 RefSeq gene 579060 580229 . - . ID=gene-AL60_RS08440;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=AL60_RS08440;old_locus_tag=AL60_00565 NZ_KK316846.1 Protein Homology CDS 579060 580229 . - 0 ID=cds-WP_003898601.1;Parent=gene-AL60_RS08440;Dbxref=GenBank:WP_003898601.1;Name=WP_003898601.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215338.1;locus_tag=AL60_RS08440;product=tRNA dihydrouridine synthase DusB;protein_id=WP_003898601.1;transl_table=11 NZ_KK316846.1 RefSeq gene 580317 581333 . - . ID=gene-AL60_RS08445;Name=desA1;gbkey=Gene;gene=desA1;gene_biotype=protein_coding;locus_tag=AL60_RS08445;old_locus_tag=AL60_00566 NZ_KK316846.1 Protein Homology CDS 580317 581333 . - 0 ID=cds-WP_003404321.1;Parent=gene-AL60_RS08445;Dbxref=GenBank:WP_003404321.1;Name=WP_003404321.1;gbkey=CDS;gene=desA1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177758.1;locus_tag=AL60_RS08445;product=acyl-ACP desaturase DesA1;protein_id=WP_003404321.1;transl_table=11 NZ_KK316846.1 RefSeq gene 581495 582136 . - . ID=gene-AL60_RS08450;Name=AL60_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08450;old_locus_tag=AL60_00567 NZ_KK316846.1 Protein Homology CDS 581495 582136 . - 0 ID=cds-WP_003404326.1;Parent=gene-AL60_RS08450;Dbxref=GenBank:WP_003404326.1;Name=WP_003404326.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215340.1;locus_tag=AL60_RS08450;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003404326.1;transl_table=11 NZ_KK316846.1 RefSeq gene 582217 583272 . + . ID=gene-AL60_RS08455;Name=AL60_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08455;old_locus_tag=AL60_00568 NZ_KK316846.1 Protein Homology CDS 582217 583272 . + 0 ID=cds-WP_003898602.1;Parent=gene-AL60_RS08455;Dbxref=GenBank:WP_003898602.1;Name=WP_003898602.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215341.1;locus_tag=AL60_RS08455;product=oxygenase MpaB family protein;protein_id=WP_003898602.1;transl_table=11 NZ_KK316846.1 RefSeq gene 583324 583716 . - . ID=gene-AL60_RS08460;Name=kmtR;gbkey=Gene;gene=kmtR;gene_biotype=protein_coding;locus_tag=AL60_RS08460;old_locus_tag=AL60_00569 NZ_KK316846.1 Protein Homology CDS 583324 583716 . - 0 ID=cds-WP_003404335.1;Parent=gene-AL60_RS08460;Dbxref=GenBank:WP_003404335.1;Name=WP_003404335.1;gbkey=CDS;gene=kmtR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215342.1;locus_tag=AL60_RS08460;product=Ni(II)/Co(II)-sensing metalloregulatory transcriptional repressor KmtR;protein_id=WP_003404335.1;transl_table=11 NZ_KK316846.1 RefSeq gene 583774 584121 . - . ID=gene-AL60_RS08465;Name=AL60_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08465;old_locus_tag=AL60_00570 NZ_KK316846.1 Protein Homology CDS 583774 584121 . - 0 ID=cds-WP_078377808.1;Parent=gene-AL60_RS08465;Dbxref=GenBank:WP_078377808.1;Name=WP_078377808.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012601.6;locus_tag=AL60_RS08465;product=tRNA-specific adenosine deaminase;protein_id=WP_078377808.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 584148 584448 . + . ID=gene-AL60_RS08470;Name=AL60_RS08470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS08470;old_locus_tag=AL60_00571;partial=true;pseudo=true;start_range=.,584148 NZ_KK316846.1 Protein Homology CDS 584148 584448 . + 0 ID=cds-AL60_RS08470;Parent=gene-AL60_RS08470;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288650.1;locus_tag=AL60_RS08470;partial=true;product=zinc ribbon domain-containing protein;pseudo=true;start_range=.,584148;transl_table=11 NZ_KK316846.1 RefSeq gene 584553 585458 . + . ID=gene-AL60_RS08475;Name=AL60_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08475;old_locus_tag=AL60_00572 NZ_KK316846.1 Protein Homology CDS 584553 585458 . + 0 ID=cds-WP_003404349.1;Parent=gene-AL60_RS08475;Dbxref=GenBank:WP_003404349.1;Name=WP_003404349.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215345.1;locus_tag=AL60_RS08475;product=SAM-dependent methyltransferase;protein_id=WP_003404349.1;transl_table=11 NZ_KK316846.1 RefSeq gene 585477 586292 . - . ID=gene-AL60_RS08480;Name=AL60_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08480;old_locus_tag=AL60_00573 NZ_KK316846.1 Protein Homology CDS 585477 586292 . - 0 ID=cds-WP_003404352.1;Parent=gene-AL60_RS08480;Dbxref=GenBank:WP_003404352.1;Name=WP_003404352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215346.1;locus_tag=AL60_RS08480;product=TIGR04255 family protein;protein_id=WP_003404352.1;transl_table=11 NZ_KK316846.1 RefSeq gene 586386 586458 . - . ID=gene-AL60_RS08485;Name=AL60_RS08485;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS08485;old_locus_tag=AL60_00574 NZ_KK316846.1 tRNAscan-SE tRNA 586386 586458 . - . ID=rna-AL60_RS08485;Parent=gene-AL60_RS08485;anticodon=(pos:complement(586423..586425));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS08485;product=tRNA-Lys NZ_KK316846.1 tRNAscan-SE exon 586386 586458 . - . ID=exon-AL60_RS08485-1;Parent=rna-AL60_RS08485;anticodon=(pos:complement(586423..586425));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS08485;product=tRNA-Lys NZ_KK316846.1 RefSeq gene 586582 586655 . + . ID=gene-AL60_RS08490;Name=AL60_RS08490;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS08490;old_locus_tag=AL60_00575 NZ_KK316846.1 tRNAscan-SE tRNA 586582 586655 . + . ID=rna-AL60_RS08490;Parent=gene-AL60_RS08490;anticodon=(pos:586617..586619);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS08490;product=tRNA-Glu NZ_KK316846.1 tRNAscan-SE exon 586582 586655 . + . ID=exon-AL60_RS08490-1;Parent=rna-AL60_RS08490;anticodon=(pos:586617..586619);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS08490;product=tRNA-Glu NZ_KK316846.1 RefSeq gene 586693 586769 . + . ID=gene-AL60_RS08495;Name=AL60_RS08495;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS08495;old_locus_tag=AL60_00576 NZ_KK316846.1 tRNAscan-SE tRNA 586693 586769 . + . ID=rna-AL60_RS08495;Parent=gene-AL60_RS08495;anticodon=(pos:586727..586729);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS08495;product=tRNA-Asp NZ_KK316846.1 tRNAscan-SE exon 586693 586769 . + . ID=exon-AL60_RS08495-1;Parent=rna-AL60_RS08495;anticodon=(pos:586727..586729);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS08495;product=tRNA-Asp NZ_KK316846.1 RefSeq gene 586796 586872 . + . ID=gene-AL60_RS08500;Name=AL60_RS08500;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS08500;old_locus_tag=AL60_00577 NZ_KK316846.1 tRNAscan-SE tRNA 586796 586872 . + . ID=rna-AL60_RS08500;Parent=gene-AL60_RS08500;anticodon=(pos:586830..586832);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS08500;product=tRNA-Phe NZ_KK316846.1 tRNAscan-SE exon 586796 586872 . + . ID=exon-AL60_RS08500-1;Parent=rna-AL60_RS08500;anticodon=(pos:586830..586832);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS08500;product=tRNA-Phe NZ_KK316846.1 RefSeq gene 587534 587947 . + . ID=gene-AL60_RS27040;Name=AL60_RS27040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27040;old_locus_tag=AL60_00578 NZ_KK316846.1 Protein Homology CDS 587534 587947 . + 0 ID=cds-WP_003404353.1;Parent=gene-AL60_RS27040;Dbxref=GenBank:WP_003404353.1;Name=WP_003404353.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177759.1;locus_tag=AL60_RS27040;product=PE family protein;protein_id=WP_003404353.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 587944 588030 . + . ID=gene-AL60_RS28070;Name=AL60_RS28070;end_range=588030,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28070;partial=true;pseudo=true NZ_KK316846.1 Protein Homology CDS 587944 588030 . + 0 ID=cds-AL60_RS28070;Parent=gene-AL60_RS28070;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=588030,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044496.3;locus_tag=AL60_RS28070;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 589099 589194 . + . ID=gene-AL60_RS28075;Name=AL60_RS28075;end_range=589194,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28075;partial=true;pseudo=true;start_range=.,589099 NZ_KK316846.1 Protein Homology CDS 589099 589194 . + 0 ID=cds-AL60_RS28075;Parent=gene-AL60_RS28075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=589194,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177759.1;locus_tag=AL60_RS28075;partial=true;product=PE family protein;pseudo=true;start_range=.,589099;transl_table=11 NZ_KK316846.1 RefSeq gene 590167 590346 . + . ID=gene-AL60_RS27890;Name=AL60_RS27890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27890 NZ_KK316846.1 Protein Homology CDS 590167 590346 . + 0 ID=cds-WP_003404355.1;Parent=gene-AL60_RS27890;Dbxref=GenBank:WP_003404355.1;Name=WP_003404355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404355.1;locus_tag=AL60_RS27890;product=hypothetical protein;protein_id=WP_003404355.1;transl_table=11 NZ_KK316846.1 RefSeq gene 590375 593014 . - . ID=gene-AL60_RS08515;Name=AL60_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08515;old_locus_tag=AL60_00580 NZ_KK316846.1 Protein Homology CDS 590375 593014 . - 0 ID=cds-WP_012054249.1;Parent=gene-AL60_RS08515;Dbxref=GenBank:WP_012054249.1;Name=WP_012054249.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177761.1;locus_tag=AL60_RS08515;product=PE family protein;protein_id=WP_012054249.1;transl_table=11 NZ_KK316846.1 RefSeq gene 593482 594126 . + . ID=gene-AL60_RS08520;Name=lpqQ;gbkey=Gene;gene=lpqQ;gene_biotype=protein_coding;locus_tag=AL60_RS08520;old_locus_tag=AL60_00581 NZ_KK316846.1 Protein Homology CDS 593482 594126 . + 0 ID=cds-WP_003404362.1;Parent=gene-AL60_RS08520;Dbxref=GenBank:WP_003404362.1;Name=WP_003404362.1;gbkey=CDS;gene=lpqQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215350.1;locus_tag=AL60_RS08520;product=sensor domain-containing protein;protein_id=WP_003404362.1;transl_table=11 NZ_KK316846.1 RefSeq gene 594107 594463 . - . ID=gene-AL60_RS27430;Name=AL60_RS27430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27430 NZ_KK316846.1 Protein Homology CDS 594107 594463 . - 0 ID=cds-WP_003911324.1;Parent=gene-AL60_RS27430;Dbxref=GenBank:WP_003911324.1;Name=WP_003911324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911324.1;locus_tag=AL60_RS27430;product=hypothetical protein;protein_id=WP_003911324.1;transl_table=11 NZ_KK316846.1 RefSeq gene 594776 595045 . - . ID=gene-AL60_RS08525;Name=AL60_RS08525;end_range=595045,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08525;old_locus_tag=AL60_00582;partial=true NZ_KK316846.1 Protein Homology CDS 594776 595045 . - 0 ID=cds-WP_031650638.1;Parent=gene-AL60_RS08525;Dbxref=GenBank:WP_031650638.1;Name=WP_031650638.1;Ontology_term=GO:0015074;end_range=595045,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS08525;partial=true;product=integrase core domain-containing protein;protein_id=WP_031650638.1;transl_table=11 NZ_KK316846.1 RefSeq gene 596599 596875 . - . ID=gene-AL60_RS08530;Name=AL60_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08530;old_locus_tag=AL60_00583;partial=true;start_range=.,596599 NZ_KK316846.1 Protein Homology CDS 596599 596875 . - 0 ID=cds-WP_031650665.1;Parent=gene-AL60_RS08530;Dbxref=GenBank:WP_031650665.1;Name=WP_031650665.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS08530;partial=true;product=transposase;protein_id=WP_031650665.1;start_range=.,596599;transl_table=11 NZ_KK316846.1 RefSeq gene 597004 597750 . - . ID=gene-AL60_RS08535;Name=AL60_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08535;old_locus_tag=AL60_00584 NZ_KK316846.1 Protein Homology CDS 597004 597750 . - 0 ID=cds-WP_003900221.1;Parent=gene-AL60_RS08535;Dbxref=GenBank:WP_003900221.1;Name=WP_003900221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015626936.1;locus_tag=AL60_RS08535;product=hypothetical protein;protein_id=WP_003900221.1;transl_table=11 NZ_KK316846.1 RefSeq gene 597728 598756 . - . ID=gene-AL60_RS08540;Name=AL60_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08540;old_locus_tag=AL60_00585 NZ_KK316846.1 Protein Homology CDS 597728 598756 . - 0 ID=cds-WP_003404368.1;Parent=gene-AL60_RS08540;Dbxref=GenBank:WP_003404368.1;Name=WP_003404368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215352.1;locus_tag=AL60_RS08540;product=type IV toxin-antitoxin system AbiEi family antitoxin;protein_id=WP_003404368.1;transl_table=11 NZ_KK316846.1 RefSeq gene 599445 600215 . + . ID=gene-AL60_RS08545;Name=lpqR;gbkey=Gene;gene=lpqR;gene_biotype=protein_coding;locus_tag=AL60_RS08545;old_locus_tag=AL60_00586 NZ_KK316846.1 Protein Homology CDS 599445 600215 . + 0 ID=cds-WP_003898609.1;Parent=gene-AL60_RS08545;Dbxref=GenBank:WP_003898609.1;Name=WP_003898609.1;gbkey=CDS;gene=lpqR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215353.1;locus_tag=AL60_RS08545;product=M15 family metallopeptidase;protein_id=WP_003898609.1;transl_table=11 NZ_KK316846.1 RefSeq gene 600302 601114 . + . ID=gene-AL60_RS08550;Name=AL60_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08550;old_locus_tag=AL60_00587 NZ_KK316846.1 Protein Homology CDS 600302 601114 . + 0 ID=cds-WP_003404373.1;Parent=gene-AL60_RS08550;Dbxref=GenBank:WP_003404373.1;Name=WP_003404373.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215354.1;locus_tag=AL60_RS08550;product=class I SAM-dependent methyltransferase;protein_id=WP_003404373.1;transl_table=11 NZ_KK316846.1 RefSeq gene 601182 602042 . - . ID=gene-AL60_RS08555;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=AL60_RS08555;old_locus_tag=AL60_00588 NZ_KK316846.1 Protein Homology CDS 601182 602042 . - 0 ID=cds-WP_003404376.1;Parent=gene-AL60_RS08555;Dbxref=GenBank:WP_003404376.1;Name=WP_003404376.1;gbkey=CDS;gene=pip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215355.1;locus_tag=AL60_RS08555;product=proline-specific peptidase family protein;protein_id=WP_003404376.1;transl_table=11 NZ_KK316846.1 RefSeq gene 602837 604129 . + . ID=gene-AL60_RS08565;Name=AL60_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08565;old_locus_tag=AL60_00590 NZ_KK316846.1 Protein Homology CDS 602837 604129 . + 0 ID=cds-WP_003404382.1;Parent=gene-AL60_RS08565;Dbxref=GenBank:WP_003404382.1;Name=WP_003404382.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215357.1;locus_tag=AL60_RS08565;product=MFS transporter;protein_id=WP_003404382.1;transl_table=11 NZ_KK316846.1 RefSeq gene 604113 605117 . + . ID=gene-AL60_RS08570;Name=AL60_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08570;old_locus_tag=AL60_00591 NZ_KK316846.1 Protein Homology CDS 604113 605117 . + 0 ID=cds-WP_003404384.1;Parent=gene-AL60_RS08570;Dbxref=GenBank:WP_003404384.1;Name=WP_003404384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215358.1;locus_tag=AL60_RS08570;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_003404384.1;transl_table=11 NZ_KK316846.1 RefSeq gene 605181 605831 . - . ID=gene-AL60_RS08575;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=AL60_RS08575;old_locus_tag=AL60_00592 NZ_KK316846.1 Protein Homology CDS 605181 605831 . - 0 ID=cds-WP_003404388.1;Parent=gene-AL60_RS08575;Dbxref=GenBank:WP_003404388.1;Name=WP_003404388.1;gbkey=CDS;gene=narL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215359.1;locus_tag=AL60_RS08575;product=two-component system response regulator NarL;protein_id=WP_003404388.1;transl_table=11 NZ_KK316846.1 RefSeq gene 605972 607192 . + . ID=gene-AL60_RS08580;Name=AL60_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08580;old_locus_tag=AL60_00593 NZ_KK316846.1 Protein Homology CDS 605972 607192 . + 0 ID=cds-WP_042507733.1;Parent=gene-AL60_RS08580;Dbxref=GenBank:WP_042507733.1;Name=WP_042507733.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287938.1;locus_tag=AL60_RS08580;product=sensor histidine kinase;protein_id=WP_042507733.1;transl_table=11 NZ_KK316846.1 RefSeq gene 607405 608919 . - . ID=gene-AL60_RS08585;Name=mmcO;gbkey=Gene;gene=mmcO;gene_biotype=protein_coding;locus_tag=AL60_RS08585;old_locus_tag=AL60_00594 NZ_KK316846.1 Protein Homology CDS 607405 608919 . - 0 ID=cds-WP_003404392.1;Parent=gene-AL60_RS08585;Dbxref=GenBank:WP_003404392.1;Name=WP_003404392.1;gbkey=CDS;gene=mmcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215361.1;locus_tag=AL60_RS08585;product=multicopper oxidase MmcO;protein_id=WP_003404392.1;transl_table=11 NZ_KK316846.1 RefSeq gene 609068 609460 . + . ID=gene-AL60_RS08590;Name=lpqs;gbkey=Gene;gene=lpqs;gene_biotype=protein_coding;locus_tag=AL60_RS08590;old_locus_tag=AL60_00595 NZ_KK316846.1 Protein Homology CDS 609068 609460 . + 0 ID=cds-WP_003901025.1;Parent=gene-AL60_RS08590;Dbxref=GenBank:WP_003901025.1;Name=WP_003901025.1;gbkey=CDS;gene=lpqs;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215362.1;locus_tag=AL60_RS08590;product=putative copper homeostasis (lipo)protein LpqS;protein_id=WP_003901025.1;transl_table=11 NZ_KK316846.1 RefSeq gene 609663 610781 . + . ID=gene-AL60_RS08595;Name=cysK2;gbkey=Gene;gene=cysK2;gene_biotype=protein_coding;locus_tag=AL60_RS08595;old_locus_tag=AL60_00596 NZ_KK316846.1 Protein Homology CDS 609663 610781 . + 0 ID=cds-WP_003404395.1;Parent=gene-AL60_RS08595;Dbxref=GenBank:WP_003404395.1;Name=WP_003404395.1;gbkey=CDS;gene=cysK2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177762.1;locus_tag=AL60_RS08595;product=S-sulfocysteine synthase CysK2;protein_id=WP_003404395.1;transl_table=11 NZ_KK316846.1 RefSeq gene 610781 612040 . + . ID=gene-AL60_RS08600;Name=AL60_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08600;old_locus_tag=AL60_00597 NZ_KK316846.1 Protein Homology CDS 610781 612040 . + 0 ID=cds-WP_003404402.1;Parent=gene-AL60_RS08600;Dbxref=GenBank:WP_003404402.1;Name=WP_003404402.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215364.1;locus_tag=AL60_RS08600;product=MDR family MFS transporter;protein_id=WP_003404402.1;transl_table=11 NZ_KK316846.1 RefSeq gene 612037 612369 . + . ID=gene-AL60_RS08605;Name=AL60_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08605;old_locus_tag=AL60_00598 NZ_KK316846.1 Protein Homology CDS 612037 612369 . + 0 ID=cds-WP_003906456.1;Parent=gene-AL60_RS08605;Dbxref=GenBank:WP_003906456.1;Name=WP_003906456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404404.1;locus_tag=AL60_RS08605;product=hypothetical protein;protein_id=WP_003906456.1;transl_table=11 NZ_KK316846.1 RefSeq gene 612366 613193 . - . ID=gene-AL60_RS08610;Name=AL60_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08610;old_locus_tag=AL60_00599 NZ_KK316846.1 Protein Homology CDS 612366 613193 . - 0 ID=cds-WP_003898616.1;Parent=gene-AL60_RS08610;Dbxref=GenBank:WP_003898616.1;Name=WP_003898616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215366.1;locus_tag=AL60_RS08610;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003898616.1;transl_table=11 NZ_KK316846.1 RefSeq gene 613482 614120 . + . ID=gene-AL60_RS0104260;Name=AL60_RS0104260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104260;old_locus_tag=AL60_00600 NZ_KK316846.1 Protein Homology CDS 613482 614120 . + 0 ID=cds-WP_003913008.1;Parent=gene-AL60_RS0104260;Dbxref=GenBank:WP_003913008.1;Name=WP_003913008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215367.2;locus_tag=AL60_RS0104260;product=hypothetical protein;protein_id=WP_003913008.1;transl_table=11 NZ_KK316846.1 RefSeq gene 614161 615843 . - . ID=gene-AL60_RS08615;Name=pdc;gbkey=Gene;gene=pdc;gene_biotype=protein_coding;locus_tag=AL60_RS08615;old_locus_tag=AL60_00601 NZ_KK316846.1 Protein Homology CDS 614161 615843 . - 0 ID=cds-WP_003900222.1;Parent=gene-AL60_RS08615;Dbxref=GenBank:WP_003900222.1;Name=WP_003900222.1;gbkey=CDS;gene=pdc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215368.1;locus_tag=AL60_RS08615;product=alpha-keto-acid decarboxylase;protein_id=WP_003900222.1;transl_table=11 NZ_KK316846.1 RefSeq gene 615908 616351 . + . ID=gene-AL60_RS08620;Name=AL60_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08620;old_locus_tag=AL60_00602 NZ_KK316846.1 Protein Homology CDS 615908 616351 . + 0 ID=cds-WP_003404412.1;Parent=gene-AL60_RS08620;Dbxref=GenBank:WP_003404412.1;Name=WP_003404412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215369.1;locus_tag=AL60_RS08620;product=SRPBCC family protein;protein_id=WP_003404412.1;transl_table=11 NZ_KK316846.1 RefSeq gene 616357 617436 . + . ID=gene-AL60_RS08625;Name=far;gbkey=Gene;gene=far;gene_biotype=protein_coding;locus_tag=AL60_RS08625;old_locus_tag=AL60_00603 NZ_KK316846.1 Protein Homology CDS 616357 617436 . + 0 ID=cds-WP_003404414.1;Parent=gene-AL60_RS08625;Dbxref=GenBank:WP_003404414.1;Name=WP_003404414.1;gbkey=CDS;gene=far;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215370.1;locus_tag=AL60_RS08625;product=fatty-acid-CoA racemase;protein_id=WP_003404414.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 617495 617954 . + . ID=gene-AL60_RS08630;Name=AL60_RS08630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS08630;old_locus_tag=AL60_00604;pseudo=true NZ_KK316846.1 Protein Homology CDS 617495 617954 . + 0 ID=cds-AL60_RS08630;Parent=gene-AL60_RS08630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351365.1;locus_tag=AL60_RS08630;product=SRPBCC family protein;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 618003 618455 . + . ID=gene-AL60_RS08635;Name=AL60_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08635;old_locus_tag=AL60_00605 NZ_KK316846.1 Protein Homology CDS 618003 618455 . + 0 ID=cds-WP_003911328.1;Parent=gene-AL60_RS08635;Dbxref=GenBank:WP_003911328.1;Name=WP_003911328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287941.1;locus_tag=AL60_RS08635;product=SRPBCC family protein;protein_id=WP_003911328.1;transl_table=11 NZ_KK316846.1 RefSeq gene 618452 619645 . - . ID=gene-AL60_RS08640;Name=dapC;gbkey=Gene;gene=dapC;gene_biotype=protein_coding;locus_tag=AL60_RS08640;old_locus_tag=AL60_00606 NZ_KK316846.1 Protein Homology CDS 618452 619645 . - 0 ID=cds-WP_003404420.1;Parent=gene-AL60_RS08640;Dbxref=GenBank:WP_003404420.1;Name=WP_003404420.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=dapC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215373.1;locus_tag=AL60_RS08640;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_003404420.1;transl_table=11 NZ_KK316846.1 RefSeq gene 619802 621013 . + . ID=gene-AL60_RS08645;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AL60_RS08645;old_locus_tag=AL60_00607 NZ_KK316846.1 Protein Homology CDS 619802 621013 . + 0 ID=cds-WP_003404423.1;Parent=gene-AL60_RS08645;Dbxref=GenBank:WP_003404423.1;Name=WP_003404423.1;Ontology_term=GO:0016747;gbkey=CDS;gene=fadA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215374.1;locus_tag=AL60_RS08645;product=acetyl-CoA C-acetyltransferase;protein_id=WP_003404423.1;transl_table=11 NZ_KK316846.1 RefSeq gene 621018 623180 . + . ID=gene-AL60_RS08650;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=AL60_RS08650;old_locus_tag=AL60_00608 NZ_KK316846.1 Protein Homology CDS 621018 623180 . + 0 ID=cds-WP_003404426.1;Parent=gene-AL60_RS08650;Dbxref=GenBank:WP_003404426.1;Name=WP_003404426.1;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215375.1;locus_tag=AL60_RS08650;product=fatty oxidation protein FadB;protein_id=WP_003404426.1;transl_table=11 NZ_KK316846.1 RefSeq gene 623248 624897 . - . ID=gene-AL60_RS08655;Name=AL60_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08655;old_locus_tag=AL60_00609 NZ_KK316846.1 Protein Homology CDS 623248 624897 . - 0 ID=cds-WP_003913615.1;Parent=gene-AL60_RS08655;Dbxref=GenBank:WP_003913615.1;Name=WP_003913615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020729577.1;locus_tag=AL60_RS08655;product=DNA repair helicase XPB;protein_id=WP_003913615.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 624964 625058 . - . ID=gene-AL60_RS28080;Name=AL60_RS28080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28080;partial=true;pseudo=true;start_range=.,624964 NZ_KK316846.1 Protein Homology CDS 624964 625058 . - 0 ID=cds-AL60_RS28080;Parent=gene-AL60_RS28080;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=AL60_RS28080;partial=true;product=sirohydrochlorin chelatase;pseudo=true;start_range=.,624964;transl_table=11 NZ_KK316846.1 RefSeq gene 625067 627337 . - . ID=gene-AL60_RS08660;Name=AL60_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08660;old_locus_tag=AL60_00610 NZ_KK316846.1 Protein Homology CDS 625067 627337 . - 0 ID=cds-WP_003898622.1;Parent=gene-AL60_RS08660;Dbxref=GenBank:WP_003898622.1;Name=WP_003898622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215377.1;locus_tag=AL60_RS08660;product=helicase-associated domain-containing protein;protein_id=WP_003898622.1;transl_table=11 NZ_KK316846.1 RefSeq gene 627405 627605 . + . ID=gene-AL60_RS0104265;Name=AL60_RS0104265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104265;old_locus_tag=AL60_00611 NZ_KK316846.1 Protein Homology CDS 627405 627605 . + 0 ID=cds-WP_003911329.1;Parent=gene-AL60_RS0104265;Dbxref=GenBank:WP_003911329.1;Name=WP_003911329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215378.2;locus_tag=AL60_RS0104265;product=hypothetical protein;protein_id=WP_003911329.1;transl_table=11 NZ_KK316846.1 RefSeq gene 627615 628118 . + . ID=gene-AL60_RS08665;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AL60_RS08665;old_locus_tag=AL60_00612 NZ_KK316846.1 Protein Homology CDS 627615 628118 . + 0 ID=cds-WP_003404544.1;Parent=gene-AL60_RS08665;Dbxref=GenBank:WP_003404544.1;Name=WP_003404544.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215379.1;locus_tag=AL60_RS08665;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_003404544.1;transl_table=11 NZ_KK316846.1 RefSeq gene 628115 628597 . + . ID=gene-AL60_RS08670;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=AL60_RS08670;old_locus_tag=AL60_00613 NZ_KK316846.1 Protein Homology CDS 628115 628597 . + 0 ID=cds-WP_003404549.1;Parent=gene-AL60_RS08670;Dbxref=GenBank:WP_003404549.1;Name=WP_003404549.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;gene=mog;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215380.1;locus_tag=AL60_RS08670;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_003404549.1;transl_table=11 NZ_KK316846.1 RefSeq gene 628594 629019 . + . ID=gene-AL60_RS08675;Name=moaE2;gbkey=Gene;gene=moaE2;gene_biotype=protein_coding;locus_tag=AL60_RS08675;old_locus_tag=AL60_00614 NZ_KK316846.1 Protein Homology CDS 628594 629019 . + 0 ID=cds-WP_003404552.1;Parent=gene-AL60_RS08675;Dbxref=GenBank:WP_003404552.1;Name=WP_003404552.1;gbkey=CDS;gene=moaE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215381.1;locus_tag=AL60_RS08675;product=molybdopterin synthase subunit MoaE2;protein_id=WP_003404552.1;transl_table=11 NZ_KK316846.1 RefSeq gene 629037 630260 . - . ID=gene-AL60_RS08680;Name=rpfA;gbkey=Gene;gene=rpfA;gene_biotype=protein_coding;locus_tag=AL60_RS08680;old_locus_tag=AL60_00615 NZ_KK316846.1 Protein Homology CDS 629037 630260 . - 0 ID=cds-WP_003900223.1;Parent=gene-AL60_RS08680;Dbxref=GenBank:WP_003900223.1;Name=WP_003900223.1;gbkey=CDS;gene=rpfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215382.1;locus_tag=AL60_RS08680;product=resuscitation-promoting factor RpfA;protein_id=WP_003900223.1;transl_table=11 NZ_KK316846.1 cmsearch riboswitch 630270 630492 . - . ID=id-NZ_KK316846.1:630270..630492;Dbxref=RFAM:RF00379;Note=cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP;bound_moiety=cyclic di-AMP;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316846.1 RefSeq gene 630708 630986 . - . ID=gene-AL60_RS08685;Name=moaD2;gbkey=Gene;gene=moaD2;gene_biotype=protein_coding;locus_tag=AL60_RS08685;old_locus_tag=AL60_00616 NZ_KK316846.1 Protein Homology CDS 630708 630986 . - 0 ID=cds-WP_003404559.1;Parent=gene-AL60_RS08685;Dbxref=GenBank:WP_003404559.1;Name=WP_003404559.1;gbkey=CDS;gene=moaD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215383.1;locus_tag=AL60_RS08685;product=molybdopterin synthase subunit MoaD2;protein_id=WP_003404559.1;transl_table=11 NZ_KK316846.1 RefSeq gene 630990 632072 . - . ID=gene-AL60_RS08690;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AL60_RS08690;old_locus_tag=AL60_00617 NZ_KK316846.1 Protein Homology CDS 630990 632072 . - 0 ID=cds-WP_003404564.1;Parent=gene-AL60_RS08690;Dbxref=GenBank:WP_003404564.1;Name=WP_003404564.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215384.1;locus_tag=AL60_RS08690;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_003404564.1;transl_table=11 NZ_KK316846.1 RefSeq gene 632069 632458 . - . ID=gene-AL60_RS08695;Name=AL60_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08695;old_locus_tag=AL60_00618 NZ_KK316846.1 Protein Homology CDS 632069 632458 . - 0 ID=cds-WP_003404566.1;Parent=gene-AL60_RS08695;Dbxref=GenBank:WP_003404566.1;Name=WP_003404566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215385.1;locus_tag=AL60_RS08695;product=YccF domain-containing protein;protein_id=WP_003404566.1;transl_table=11 NZ_KK316846.1 RefSeq gene 632623 633030 . + . ID=gene-AL60_RS08700;Name=cspB;gbkey=Gene;gene=cspB;gene_biotype=protein_coding;locus_tag=AL60_RS08700;old_locus_tag=AL60_00619 NZ_KK316846.1 Protein Homology CDS 632623 633030 . + 0 ID=cds-WP_003404570.1;Parent=gene-AL60_RS08700;Dbxref=GenBank:WP_003404570.1;Name=WP_003404570.1;Ontology_term=GO:0003676;gbkey=CDS;gene=cspB;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215386.1;locus_tag=AL60_RS08700;product=cold-shock protein;protein_id=WP_003404570.1;transl_table=11 NZ_KK316846.1 RefSeq gene 633149 634978 . - . ID=gene-AL60_RS08705;Name=AL60_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08705;old_locus_tag=AL60_00620 NZ_KK316846.1 Protein Homology CDS 633149 634978 . - 0 ID=cds-WP_009938284.1;Parent=gene-AL60_RS08705;Dbxref=GenBank:WP_009938284.1;Name=WP_009938284.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938284.1;locus_tag=AL60_RS08705;product=PE family protein;protein_id=WP_009938284.1;transl_table=11 NZ_KK316846.1 RefSeq gene 635239 637191 . + . ID=gene-AL60_RS08710;Name=AL60_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08710;old_locus_tag=AL60_00621 NZ_KK316846.1 Protein Homology CDS 635239 637191 . + 0 ID=cds-WP_003898626.1;Parent=gene-AL60_RS08710;Dbxref=GenBank:WP_003898626.1;Name=WP_003898626.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215388.1;locus_tag=AL60_RS08710;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003898626.1;transl_table=11 NZ_KK316846.1 RefSeq gene 637280 638440 . - . ID=gene-AL60_RS08715;Name=AL60_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08715;old_locus_tag=AL60_00622 NZ_KK316846.1 Protein Homology CDS 637280 638440 . - 0 ID=cds-WP_003404586.1;Parent=gene-AL60_RS08715;Dbxref=GenBank:WP_003404586.1;Name=WP_003404586.1;Ontology_term=GO:0007165;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215389.1;locus_tag=AL60_RS08715;product=FIST signal transduction protein;protein_id=WP_003404586.1;transl_table=11 NZ_KK316846.1 RefSeq gene 638540 639028 . - . ID=gene-AL60_RS08720;Name=AL60_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08720;old_locus_tag=AL60_00623 NZ_KK316846.1 Protein Homology CDS 638540 639028 . - 0 ID=cds-WP_003404591.1;Parent=gene-AL60_RS08720;Dbxref=GenBank:WP_003404591.1;Name=WP_003404591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215390.1;locus_tag=AL60_RS08720;product=DUF2771 domain-containing protein;protein_id=WP_003404591.1;transl_table=11 NZ_KK316846.1 RefSeq gene 639025 640671 . - . ID=gene-AL60_RS08725;Name=AL60_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08725;old_locus_tag=AL60_00624 NZ_KK316846.1 Protein Homology CDS 639025 640671 . - 0 ID=cds-WP_003900225.1;Parent=gene-AL60_RS08725;Dbxref=GenBank:WP_003900225.1;Name=WP_003900225.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215391.1;locus_tag=AL60_RS08725;product=MFS transporter;protein_id=WP_003900225.1;transl_table=11 NZ_KK316846.1 RefSeq gene 640809 641597 . + . ID=gene-AL60_RS08730;Name=AL60_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08730;old_locus_tag=AL60_00625 NZ_KK316846.1 Protein Homology CDS 640809 641597 . + 0 ID=cds-WP_003404596.1;Parent=gene-AL60_RS08730;Dbxref=GenBank:WP_003404596.1;Name=WP_003404596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215392.1;locus_tag=AL60_RS08730;product=DUF3027 domain-containing protein;protein_id=WP_003404596.1;transl_table=11 NZ_KK316846.1 RefSeq gene 641606 642940 . - . ID=gene-AL60_RS08735;Name=AL60_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08735;old_locus_tag=AL60_00626 NZ_KK316846.1 Protein Homology CDS 641606 642940 . - 0 ID=cds-WP_023643435.1;Parent=gene-AL60_RS08735;Dbxref=GenBank:WP_023643435.1;Name=WP_023643435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177764.1;locus_tag=AL60_RS08735;product=PPE family protein;protein_id=WP_023643435.1;transl_table=11 NZ_KK316846.1 RefSeq gene 643218 643493 . - . ID=gene-AL60_RS08740;Name=AL60_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08740;old_locus_tag=AL60_00627 NZ_KK316846.1 Protein Homology CDS 643218 643493 . - 0 ID=cds-WP_003404603.1;Parent=gene-AL60_RS08740;Dbxref=GenBank:WP_003404603.1;Name=WP_003404603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215394.1;locus_tag=AL60_RS08740;product=DUF2530 domain-containing protein;protein_id=WP_003404603.1;transl_table=11 NZ_KK316846.1 RefSeq gene 643671 644102 . + . ID=gene-AL60_RS08745;Name=AL60_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08745;old_locus_tag=AL60_00628 NZ_KK316846.1 Protein Homology CDS 643671 644102 . + 0 ID=cds-WP_003404606.1;Parent=gene-AL60_RS08745;Dbxref=GenBank:WP_003404606.1;Name=WP_003404606.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215395.1;locus_tag=AL60_RS08745;product=Rv0880 family HTH-type transcriptional regulator;protein_id=WP_003404606.1;transl_table=11 NZ_KK316846.1 RefSeq gene 644099 644965 . + . ID=gene-AL60_RS08750;Name=AL60_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08750;old_locus_tag=AL60_00629 NZ_KK316846.1 Protein Homology CDS 644099 644965 . + 0 ID=cds-WP_012054250.1;Parent=gene-AL60_RS08750;Dbxref=GenBank:WP_012054250.1;Name=WP_012054250.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215396.1;locus_tag=AL60_RS08750;product=TrmH family RNA methyltransferase;protein_id=WP_012054250.1;transl_table=11 NZ_KK316846.1 RefSeq gene 644962 645246 . + . ID=gene-AL60_RS08755;Name=AL60_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08755;old_locus_tag=AL60_00630 NZ_KK316846.1 Protein Homology CDS 644962 645246 . + 0 ID=cds-WP_012054251.1;Parent=gene-AL60_RS08755;Dbxref=GenBank:WP_012054251.1;Name=WP_012054251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215397.1;locus_tag=AL60_RS08755;product=DUF2537 domain-containing protein;protein_id=WP_012054251.1;transl_table=11 NZ_KK316846.1 RefSeq gene 645243 646004 . - . ID=gene-AL60_RS08760;Name=sepH;gbkey=Gene;gene=sepH;gene_biotype=protein_coding;locus_tag=AL60_RS08760;old_locus_tag=AL60_00631 NZ_KK316846.1 Protein Homology CDS 645243 646004 . - 0 ID=cds-WP_003404617.1;Parent=gene-AL60_RS08760;Dbxref=GenBank:WP_003404617.1;Name=WP_003404617.1;Ontology_term=GO:0051301;gbkey=CDS;gene=sepH;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215398.1;locus_tag=AL60_RS08760;product=septation protein SepH;protein_id=WP_003404617.1;transl_table=11 NZ_KK316846.1 RefSeq gene 646161 647291 . - . ID=gene-AL60_RS08765;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AL60_RS08765;old_locus_tag=AL60_00632 NZ_KK316846.1 Protein Homology CDS 646161 647291 . - 0 ID=cds-WP_003404623.1;Parent=gene-AL60_RS08765;Dbxref=GenBank:WP_003404623.1;Name=WP_003404623.1;Ontology_term=GO:0006564,GO:0009058,GO:0004648;gbkey=CDS;gene=serC;go_function=O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215399.1;locus_tag=AL60_RS08765;product=phosphoserine transaminase;protein_id=WP_003404623.1;transl_table=11 NZ_KK316846.1 RefSeq gene 647499 648521 . + . ID=gene-AL60_RS08770;Name=AL60_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08770;old_locus_tag=AL60_00633 NZ_KK316846.1 Protein Homology CDS 647499 648521 . + 0 ID=cds-WP_003404627.1;Parent=gene-AL60_RS08770;Dbxref=GenBank:WP_003404627.1;Name=WP_003404627.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215400.1;locus_tag=AL60_RS08770;product=AurF N-oxygenase family protein;protein_id=WP_003404627.1;transl_table=11 NZ_KK316846.1 RefSeq gene 648540 650267 . + . ID=gene-AL60_RS08775;Name=fprB;gbkey=Gene;gene=fprB;gene_biotype=protein_coding;locus_tag=AL60_RS08775;old_locus_tag=AL60_00634 NZ_KK316846.1 Protein Homology CDS 648540 650267 . + 0 ID=cds-WP_003404631.1;Parent=gene-AL60_RS08775;Dbxref=GenBank:WP_003404631.1;Name=WP_003404631.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fprB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215401.1;locus_tag=AL60_RS08775;product=FAD-dependent oxidoreductase;protein_id=WP_003404631.1;transl_table=11 NZ_KK316846.1 RefSeq gene 650250 650708 . - . ID=gene-AL60_RS08780;Name=AL60_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08780;old_locus_tag=AL60_00635 NZ_KK316846.1 Protein Homology CDS 650250 650708 . - 0 ID=cds-WP_003404633.1;Parent=gene-AL60_RS08780;Dbxref=GenBank:WP_003404633.1;Name=WP_003404633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215402.1;locus_tag=AL60_RS08780;product=VOC family protein;protein_id=WP_003404633.1;transl_table=11 NZ_KK316846.1 RefSeq gene 651970 653442 . + . ID=gene-AL60_RS08785;Name=spmT;gbkey=Gene;gene=spmT;gene_biotype=protein_coding;locus_tag=AL60_RS08785;old_locus_tag=AL60_00636 NZ_KK316846.1 Protein Homology CDS 651970 653442 . + 0 ID=cds-WP_003901038.1;Parent=gene-AL60_RS08785;Dbxref=GenBank:WP_003901038.1;Name=WP_003901038.1;gbkey=CDS;gene=spmT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215403.1;locus_tag=AL60_RS08785;product=sphingomyelinase;protein_id=WP_003901038.1;transl_table=11 NZ_KK316846.1 RefSeq gene 653477 654598 . - . ID=gene-AL60_RS08790;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=AL60_RS08790;old_locus_tag=AL60_00637 NZ_KK316846.1 Protein Homology CDS 653477 654598 . - 0 ID=cds-WP_003898633.1;Parent=gene-AL60_RS08790;Dbxref=GenBank:WP_003898633.1;Name=WP_003898633.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215404.1;locus_tag=AL60_RS08790;product=citrate synthase 2;protein_id=WP_003898633.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 654685 657949 . - . ID=gene-AL60_RS08795;Name=AL60_RS08795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS08795;old_locus_tag=AL60_00638;pseudo=true NZ_KK316846.1 Protein Homology CDS 654685 657949 . - 0 ID=cds-AL60_RS08795;Parent=gene-AL60_RS08795;Note=frameshifted;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292513.1;locus_tag=AL60_RS08795;product=LuxR C-terminal-related transcriptional regulator;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 658590 660077 . + . ID=gene-AL60_RS08805;Name=AL60_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08805;old_locus_tag=AL60_00640 NZ_KK316846.1 Protein Homology CDS 658590 660077 . + 0 ID=cds-WP_003404651.1;Parent=gene-AL60_RS08805;Dbxref=GenBank:WP_003404651.1;Name=WP_003404651.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215407.1;locus_tag=AL60_RS08805;product=flavin-containing monooxygenase;protein_id=WP_003404651.1;transl_table=11 NZ_KK316846.1 RefSeq gene 660055 661032 . - . ID=gene-AL60_RS08810;Name=AL60_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08810;old_locus_tag=AL60_00641 NZ_KK316846.1 Protein Homology CDS 660055 661032 . - 0 ID=cds-WP_003404654.1;Parent=gene-AL60_RS08810;Dbxref=GenBank:WP_003404654.1;Name=WP_003404654.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215408.1;locus_tag=AL60_RS08810;product=class I SAM-dependent methyltransferase;protein_id=WP_003404654.1;transl_table=11 NZ_KK316846.1 RefSeq gene 661261 662442 . + . ID=gene-AL60_RS08815;Name=AL60_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08815;old_locus_tag=AL60_00642 NZ_KK316846.1 Protein Homology CDS 661261 662442 . + 0 ID=cds-WP_003404660.1;Parent=gene-AL60_RS08815;Dbxref=GenBank:WP_003404660.1;Name=WP_003404660.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215409.1;locus_tag=AL60_RS08815;product=ATP-binding protein;protein_id=WP_003404660.1;transl_table=11 NZ_KK316846.1 RefSeq gene 662600 664036 . + . ID=gene-AL60_RS08820;Name=AL60_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08820;old_locus_tag=AL60_00643 NZ_KK316846.1 Protein Homology CDS 662600 664036 . + 0 ID=cds-WP_003898635.1;Parent=gene-AL60_RS08820;Dbxref=GenBank:WP_003898635.1;Name=WP_003898635.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898635.1;locus_tag=AL60_RS08820;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003898635.1;transl_table=11 NZ_KK316846.1 RefSeq gene 664209 665504 . + . ID=gene-AL60_RS08825;Name=AL60_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08825;old_locus_tag=AL60_00644 NZ_KK316846.1 Protein Homology CDS 664209 665504 . + 0 ID=cds-WP_031721480.1;Parent=gene-AL60_RS08825;Dbxref=GenBank:WP_031721480.1;Name=WP_031721480.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215411.1;locus_tag=AL60_RS08825;product=citrate synthase;protein_id=WP_031721480.1;transl_table=11 NZ_KK316846.1 RefSeq gene 665545 667152 . - . ID=gene-AL60_RS08830;Name=AL60_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08830;old_locus_tag=AL60_00645 NZ_KK316846.1 Protein Homology CDS 665545 667152 . - 0 ID=cds-WP_003900230.1;Parent=gene-AL60_RS08830;Dbxref=GenBank:WP_003900230.1;Name=WP_003900230.1;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215412.1;locus_tag=AL60_RS08830;product=phytoene desaturase family protein;protein_id=WP_003900230.1;transl_table=11 NZ_KK316846.1 RefSeq gene 667178 667441 . - . ID=gene-AL60_RS08835;Name=AL60_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08835;old_locus_tag=AL60_00646 NZ_KK316846.1 Protein Homology CDS 667178 667441 . - 0 ID=cds-WP_003404673.1;Parent=gene-AL60_RS08835;Dbxref=GenBank:WP_003404673.1;Name=WP_003404673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215413.1;locus_tag=AL60_RS08835;product=DUF2630 family protein;protein_id=WP_003404673.1;transl_table=11 NZ_KK316846.1 RefSeq gene 667549 668529 . + . ID=gene-AL60_RS08840;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=protein_coding;gene_synonym=ompATb;locus_tag=AL60_RS08840;old_locus_tag=AL60_00647 NZ_KK316846.1 Protein Homology CDS 667549 668529 . + 0 ID=cds-WP_003404684.1;Parent=gene-AL60_RS08840;Dbxref=GenBank:WP_003404684.1;Name=WP_003404684.1;gbkey=CDS;gene=arfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215414.1;locus_tag=AL60_RS08840;product=channel-forming protein ArfA/OmpATb;protein_id=WP_003404684.1;transl_table=11 NZ_KK316846.1 RefSeq gene 668542 668694 . + . ID=gene-AL60_RS08845;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=AL60_RS08845;old_locus_tag=AL60_00648 NZ_KK316846.1 Protein Homology CDS 668542 668694 . + 0 ID=cds-WP_003404687.1;Parent=gene-AL60_RS08845;Dbxref=GenBank:WP_003404687.1;Name=WP_003404687.1;gbkey=CDS;gene=arfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215415.1;locus_tag=AL60_RS08845;product=channel accessory protein ArfB;protein_id=WP_003404687.1;transl_table=11 NZ_KK316846.1 RefSeq gene 668694 669221 . + . ID=gene-AL60_RS08850;Name=arfC;gbkey=Gene;gene=arfC;gene_biotype=protein_coding;locus_tag=AL60_RS08850;old_locus_tag=AL60_00649 NZ_KK316846.1 Protein Homology CDS 668694 669221 . + 0 ID=cds-WP_003404688.1;Parent=gene-AL60_RS08850;Dbxref=GenBank:WP_003404688.1;Name=WP_003404688.1;gbkey=CDS;gene=arfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215416.1;locus_tag=AL60_RS08850;product=channel accessory protein ArfC%2C sunset domain variant;protein_id=WP_003404688.1;transl_table=11 NZ_KK316846.1 RefSeq gene 669238 670578 . - . ID=gene-AL60_RS08855;Name=prrB;gbkey=Gene;gene=prrB;gene_biotype=protein_coding;locus_tag=AL60_RS08855;old_locus_tag=AL60_00650 NZ_KK316846.1 Protein Homology CDS 669238 670578 . - 0 ID=cds-WP_003404689.1;Parent=gene-AL60_RS08855;Dbxref=GenBank:WP_003404689.1;Name=WP_003404689.1;gbkey=CDS;gene=prrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215417.1;locus_tag=AL60_RS08855;product=two-component system sensor histidine kinase PrrB;protein_id=WP_003404689.1;transl_table=11 NZ_KK316846.1 RefSeq gene 670589 671299 . - . ID=gene-AL60_RS08860;Name=prrA;gbkey=Gene;gene=prrA;gene_biotype=protein_coding;locus_tag=AL60_RS08860;old_locus_tag=AL60_00651 NZ_KK316846.1 Protein Homology CDS 670589 671299 . - 0 ID=cds-WP_003404690.1;Parent=gene-AL60_RS08860;Dbxref=GenBank:WP_003404690.1;Name=WP_003404690.1;gbkey=CDS;gene=prrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215418.1;locus_tag=AL60_RS08860;product=two-component system response regulator PrrA;protein_id=WP_003404690.1;transl_table=11 NZ_KK316846.1 RefSeq gene 671430 672917 . - . ID=gene-AL60_RS08865;Name=AL60_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08865;old_locus_tag=AL60_00652 NZ_KK316846.1 Protein Homology CDS 671430 672917 . - 0 ID=cds-WP_003404691.1;Parent=gene-AL60_RS08865;Dbxref=GenBank:WP_003404691.1;Name=WP_003404691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215419.1;locus_tag=AL60_RS08865;product=carboxyl transferase domain-containing protein;protein_id=WP_003404691.1;transl_table=11 NZ_KK316846.1 RefSeq gene 672944 673675 . + . ID=gene-AL60_RS08870;Name=AL60_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08870;old_locus_tag=AL60_00653 NZ_KK316846.1 Protein Homology CDS 672944 673675 . + 0 ID=cds-WP_003404702.1;Parent=gene-AL60_RS08870;Dbxref=GenBank:WP_003404702.1;Name=WP_003404702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215420.1;locus_tag=AL60_RS08870;product=enoyl-CoA hydratase;protein_id=WP_003404702.1;transl_table=11 NZ_KK316846.1 RefSeq gene 673681 674799 . + . ID=gene-AL60_RS08875;Name=AL60_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08875;old_locus_tag=AL60_00654 NZ_KK316846.1 Protein Homology CDS 673681 674799 . + 0 ID=cds-WP_003404705.1;Parent=gene-AL60_RS08875;Dbxref=GenBank:WP_003404705.1;Name=WP_003404705.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215421.1;locus_tag=AL60_RS08875;product=MBL fold metallo-hydrolase;protein_id=WP_003404705.1;transl_table=11 NZ_KK316846.1 RefSeq gene 674892 676472 . + . ID=gene-AL60_RS08880;Name=AL60_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08880;old_locus_tag=AL60_00655 NZ_KK316846.1 Protein Homology CDS 674892 676472 . + 0 ID=cds-WP_003909313.1;Parent=gene-AL60_RS08880;Dbxref=GenBank:WP_003909313.1;Name=WP_003909313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009975161.1;locus_tag=AL60_RS08880;product=serine hydrolase;protein_id=WP_003909313.1;transl_table=11 NZ_KK316846.1 RefSeq gene 676469 678862 . + . ID=gene-AL60_RS08885;Name=ctpE;gbkey=Gene;gene=ctpE;gene_biotype=protein_coding;locus_tag=AL60_RS08885;old_locus_tag=AL60_00656 NZ_KK316846.1 Protein Homology CDS 676469 678862 . + 0 ID=cds-WP_003898639.1;Parent=gene-AL60_RS08885;Dbxref=GenBank:WP_003898639.1;Name=WP_003898639.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=ctpE;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215423.1;locus_tag=AL60_RS08885;product=cation-translocating P-type ATPase;protein_id=WP_003898639.1;transl_table=11 NZ_KK316846.1 RefSeq gene 679135 679293 . + . ID=gene-AL60_RS27045;Name=AL60_RS27045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27045 NZ_KK316846.1 Protein Homology CDS 679135 679293 . + 0 ID=cds-WP_003404720.1;Parent=gene-AL60_RS27045;Dbxref=GenBank:WP_003404720.1;Name=WP_003404720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404720.1;locus_tag=AL60_RS27045;product=hypothetical protein;protein_id=WP_003404720.1;transl_table=11 NZ_KK316846.1 RefSeq gene 679419 679598 . + . ID=gene-AL60_RS08890;Name=AL60_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08890;old_locus_tag=AL60_00657 NZ_KK316846.1 Protein Homology CDS 679419 679598 . + 0 ID=cds-WP_003898641.1;Parent=gene-AL60_RS08890;Dbxref=GenBank:WP_003898641.1;Name=WP_003898641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215424.1;locus_tag=AL60_RS08890;product=antitoxin;protein_id=WP_003898641.1;transl_table=11 NZ_KK316846.1 RefSeq gene 679604 680038 . + . ID=gene-AL60_RS08895;Name=AL60_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08895;old_locus_tag=AL60_00658 NZ_KK316846.1 Protein Homology CDS 679604 680038 . + 0 ID=cds-WP_003404726.1;Parent=gene-AL60_RS08895;Dbxref=GenBank:WP_003404726.1;Name=WP_003404726.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215425.1;locus_tag=AL60_RS08895;product=type II toxin-antitoxin system Rv0910 family toxin;protein_id=WP_003404726.1;transl_table=11 NZ_KK316846.1 RefSeq gene 680136 680909 . + . ID=gene-AL60_RS08900;Name=AL60_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08900;old_locus_tag=AL60_00659 NZ_KK316846.1 Protein Homology CDS 680136 680909 . + 0 ID=cds-WP_003404735.1;Parent=gene-AL60_RS08900;Dbxref=GenBank:WP_003404735.1;Name=WP_003404735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215426.1;locus_tag=AL60_RS08900;product=VOC family protein;protein_id=WP_003404735.1;transl_table=11 NZ_KK316846.1 RefSeq gene 680974 681423 . + . ID=gene-AL60_RS08905;Name=AL60_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08905;old_locus_tag=AL60_00660 NZ_KK316846.1 Protein Homology CDS 680974 681423 . + 0 ID=cds-WP_003404738.1;Parent=gene-AL60_RS08905;Dbxref=GenBank:WP_003404738.1;Name=WP_003404738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215427.1;locus_tag=AL60_RS08905;product=hypothetical protein;protein_id=WP_003404738.1;transl_table=11 NZ_KK316846.1 RefSeq gene 681558 681788 . - . ID=gene-AL60_RS0104285;Name=AL60_RS0104285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104285 NZ_KK316846.1 Protein Homology CDS 681558 681788 . - 0 ID=cds-WP_003898642.1;Parent=gene-AL60_RS0104285;Dbxref=GenBank:WP_003898642.1;Name=WP_003898642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404739.1;locus_tag=AL60_RS0104285;product=hypothetical protein;protein_id=WP_003898642.1;transl_table=11 NZ_KK316846.1 RefSeq gene 681955 683463 . - . ID=gene-AL60_RS08910;Name=AL60_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08910;old_locus_tag=AL60_00661 NZ_KK316846.1 Protein Homology CDS 681955 683463 . - 0 ID=cds-WP_003404742.1;Parent=gene-AL60_RS08910;Dbxref=GenBank:WP_003404742.1;Name=WP_003404742.1;Ontology_term=GO:0006720,GO:0016702,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of two atoms of oxygen|0016702||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid metabolic process|0006720||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215428.1;locus_tag=AL60_RS08910;product=carotenoid oxygenase family protein;protein_id=WP_003404742.1;transl_table=11 NZ_KK316846.1 RefSeq gene 683465 684703 . - . ID=gene-AL60_RS08915;Name=AL60_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08915;old_locus_tag=AL60_00662 NZ_KK316846.1 Protein Homology CDS 683465 684703 . - 0 ID=cds-WP_003404744.1;Parent=gene-AL60_RS08915;Dbxref=GenBank:WP_003404744.1;Name=WP_003404744.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215429.1;locus_tag=AL60_RS08915;product=acetyl-CoA acetyltransferase;protein_id=WP_003404744.1;transl_table=11 NZ_KK316846.1 RefSeq gene 684796 686067 . - . ID=gene-AL60_RS08920;Name=AL60_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08920;old_locus_tag=AL60_00663 NZ_KK316846.1 Protein Homology CDS 684796 686067 . - 0 ID=cds-WP_003404747.1;Parent=gene-AL60_RS08920;Dbxref=GenBank:WP_003404747.1;Name=WP_003404747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177765.1;locus_tag=AL60_RS08920;product=PPE family protein;protein_id=WP_003404747.1;transl_table=11 NZ_KK316846.1 RefSeq gene 686082 686381 . - . ID=gene-AL60_RS08925;Name=AL60_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08925;old_locus_tag=AL60_00664 NZ_KK316846.1 Protein Homology CDS 686082 686381 . - 0 ID=cds-WP_003404748.1;Parent=gene-AL60_RS08925;Dbxref=GenBank:WP_003404748.1;Name=WP_003404748.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177766.1;locus_tag=AL60_RS08925;product=PE family protein;protein_id=WP_003404748.1;transl_table=11 NZ_KK316846.1 RefSeq gene 686825 688606 . + . ID=gene-AL60_RS08930;Name=betP;gbkey=Gene;gene=betP;gene_biotype=protein_coding;locus_tag=AL60_RS08930;old_locus_tag=AL60_00665 NZ_KK316846.1 Protein Homology CDS 686825 688606 . + 0 ID=cds-WP_003404749.1;Parent=gene-AL60_RS08930;Dbxref=GenBank:WP_003404749.1;Name=WP_003404749.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;gene=betP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215432.1;locus_tag=AL60_RS08930;product=BCCT family transporter;protein_id=WP_003404749.1;transl_table=11 NZ_KK316846.1 RefSeq gene 688603 688860 . + . ID=gene-AL60_RS0104290;Name=AL60_RS0104290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104290 NZ_KK316846.1 Protein Homology CDS 688603 688860 . + 0 ID=cds-WP_003404750.1;Parent=gene-AL60_RS0104290;Dbxref=GenBank:WP_003404750.1;Name=WP_003404750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404750.1;locus_tag=AL60_RS0104290;product=hypothetical protein;protein_id=WP_003404750.1;transl_table=11 NZ_KK316846.1 RefSeq gene 688949 689425 . + . ID=gene-AL60_RS08935;Name=AL60_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08935;old_locus_tag=AL60_00666 NZ_KK316846.1 Protein Homology CDS 688949 689425 . + 0 ID=cds-WP_003898647.1;Parent=gene-AL60_RS08935;Dbxref=GenBank:WP_003898647.1;Name=WP_003898647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215433.1;locus_tag=AL60_RS08935;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_003898647.1;transl_table=11 NZ_KK316846.1 RefSeq gene 689422 689922 . + . ID=gene-AL60_RS08940;Name=AL60_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08940;old_locus_tag=AL60_00667 NZ_KK316846.1 Protein Homology CDS 689422 689922 . + 0 ID=cds-WP_003404756.1;Parent=gene-AL60_RS08940;Dbxref=GenBank:WP_003404756.1;Name=WP_003404756.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215434.1;locus_tag=AL60_RS08940;product=GNAT family N-acetyltransferase;protein_id=WP_003404756.1;transl_table=11 NZ_KK316846.1 RefSeq gene 690059 690131 . - . ID=gene-AL60_RS08945;Name=AL60_RS08945;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS08945;old_locus_tag=AL60_00668 NZ_KK316846.1 tRNAscan-SE tRNA 690059 690131 . - . ID=rna-AL60_RS08945;Parent=gene-AL60_RS08945;anticodon=(pos:complement(690096..690098));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS08945;product=tRNA-Arg NZ_KK316846.1 tRNAscan-SE exon 690059 690131 . - . ID=exon-AL60_RS08945-1;Parent=rna-AL60_RS08945;anticodon=(pos:complement(690096..690098));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS08945;product=tRNA-Arg NZ_KK316846.1 RefSeq gene 690235 691554 . - . ID=gene-AL60_RS08950;Name=AL60_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08950;old_locus_tag=AL60_00669 NZ_KK316846.1 Protein Homology CDS 690235 691554 . - 0 ID=cds-WP_003404757.1;Parent=gene-AL60_RS08950;Dbxref=GenBank:WP_003404757.1;Name=WP_003404757.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215435.1;locus_tag=AL60_RS08950;product=IS256-like element IS1554 family transposase;protein_id=WP_003404757.1;transl_table=11 NZ_KK316846.1 RefSeq gene 691842 692423 . + . ID=gene-AL60_RS08955;Name=AL60_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08955;old_locus_tag=AL60_00670 NZ_KK316846.1 Protein Homology CDS 691842 692423 . + 0 ID=cds-WP_003404760.1;Parent=gene-AL60_RS08955;Dbxref=GenBank:WP_003404760.1;Name=WP_003404760.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215436.1;locus_tag=AL60_RS08955;product=IS607-like element IS1535 family transposase;protein_id=WP_003404760.1;transl_table=11 NZ_KK316846.1 RefSeq gene 692423 694075 . + . ID=gene-AL60_RS08960;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AL60_RS08960;old_locus_tag=AL60_00671 NZ_KK316846.1 Protein Homology CDS 692423 694075 . + 0 ID=cds-WP_003404761.1;Parent=gene-AL60_RS08960;Dbxref=GenBank:WP_003404761.1;Name=WP_003404761.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215437.1;locus_tag=AL60_RS08960;product=IS607 family element RNA-guided endonuclease TnpB;protein_id=WP_003404761.1;transl_table=11 NZ_KK316846.1 RefSeq gene 694251 695315 . - . ID=gene-AL60_RS08965;Name=AL60_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08965;old_locus_tag=AL60_00672 NZ_KK316846.1 Protein Homology CDS 694251 695315 . - 0 ID=cds-WP_003898648.1;Parent=gene-AL60_RS08965;Dbxref=GenBank:WP_003898648.1;Name=WP_003898648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215438.1;locus_tag=AL60_RS08965;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_003898648.1;transl_table=11 NZ_KK316846.1 RefSeq gene 695316 696602 . - . ID=gene-AL60_RS08970;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=AL60_RS08970;old_locus_tag=AL60_00673 NZ_KK316846.1 Protein Homology CDS 695316 696602 . - 0 ID=cds-WP_003898649.1;Parent=gene-AL60_RS08970;Dbxref=GenBank:WP_003898649.1;Name=WP_003898649.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mntH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177767.1;locus_tag=AL60_RS08970;product=Nramp family divalent metal transporter;protein_id=WP_003898649.1;transl_table=11 NZ_KK316846.1 RefSeq gene 696634 697371 . - . ID=gene-AL60_RS08975;Name=AL60_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08975;old_locus_tag=AL60_00674 NZ_KK316846.1 Protein Homology CDS 696634 697371 . - 0 ID=cds-WP_003404764.1;Parent=gene-AL60_RS08975;Dbxref=GenBank:WP_003404764.1;Name=WP_003404764.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215440.1;locus_tag=AL60_RS08975;product=flavodoxin family protein;protein_id=WP_003404764.1;transl_table=11 NZ_KK316846.1 RefSeq gene 697448 698524 . - . ID=gene-AL60_RS08980;Name=AL60_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08980;old_locus_tag=AL60_00675 NZ_KK316846.1 Protein Homology CDS 697448 698524 . - 0 ID=cds-WP_003404767.1;Parent=gene-AL60_RS08980;Dbxref=GenBank:WP_003404767.1;Name=WP_003404767.1;Ontology_term=GO:0016638;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215441.1;locus_tag=AL60_RS08980;product=NAD(P)H-dependent amine dehydrogenase family protein;protein_id=WP_003404767.1;transl_table=11 NZ_KK316846.1 RefSeq gene 698578 699369 . - . ID=gene-AL60_RS08985;Name=AL60_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS08985;old_locus_tag=AL60_00676 NZ_KK316846.1 Protein Homology CDS 698578 699369 . - 0 ID=cds-WP_003404769.1;Parent=gene-AL60_RS08985;Dbxref=GenBank:WP_003404769.1;Name=WP_003404769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215442.1;locus_tag=AL60_RS08985;product=SDR family oxidoreductase;protein_id=WP_003404769.1;transl_table=11 NZ_KK316846.1 RefSeq gene 699641 700753 . + . ID=gene-AL60_RS08990;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AL60_RS08990;old_locus_tag=AL60_00677 NZ_KK316846.1 Protein Homology CDS 699641 700753 . + 0 ID=cds-WP_003404775.1;Parent=gene-AL60_RS08990;Dbxref=GenBank:WP_003404775.1;Name=WP_003404775.1;Ontology_term=GO:0006817,GO:0035435,GO:0015415,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;go_process=phosphate ion transport|0006817||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177768.1;locus_tag=AL60_RS08990;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_003404775.1;transl_table=11 NZ_KK316846.1 RefSeq gene 700766 701740 . + . ID=gene-AL60_RS08995;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AL60_RS08995;old_locus_tag=AL60_00678 NZ_KK316846.1 Protein Homology CDS 700766 701740 . + 0 ID=cds-WP_003404779.1;Parent=gene-AL60_RS08995;Dbxref=GenBank:WP_003404779.1;Name=WP_003404779.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215444.1;locus_tag=AL60_RS08995;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_003404779.1;transl_table=11 NZ_KK316846.1 RefSeq gene 701737 702651 . + . ID=gene-AL60_RS09000;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AL60_RS09000;old_locus_tag=AL60_00679 NZ_KK316846.1 Protein Homology CDS 701737 702651 . + 0 ID=cds-WP_003898651.1;Parent=gene-AL60_RS09000;Dbxref=GenBank:WP_003898651.1;Name=WP_003898651.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898651.1;locus_tag=AL60_RS09000;product=phosphate ABC transporter permease PstA;protein_id=WP_003898651.1;transl_table=11 NZ_KK316846.1 RefSeq gene 702658 704652 . - . ID=gene-AL60_RS09005;Name=pknD;gbkey=Gene;gene=pknD;gene_biotype=protein_coding;locus_tag=AL60_RS09005;old_locus_tag=AL60_00680 NZ_KK316846.1 Protein Homology CDS 702658 704652 . - 0 ID=cds-WP_003404782.1;Parent=gene-AL60_RS09005;Dbxref=GenBank:WP_003404782.1;Name=WP_003404782.1;gbkey=CDS;gene=pknD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215446.1;locus_tag=AL60_RS09005;product=serine/threonine protein kinase PknD;protein_id=WP_003404782.1;transl_table=11 NZ_KK316846.1 RefSeq gene 704674 705786 . - . ID=gene-AL60_RS09010;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AL60_RS09010;old_locus_tag=AL60_00681 NZ_KK316846.1 Protein Homology CDS 704674 705786 . - 0 ID=cds-WP_003898652.1;Parent=gene-AL60_RS09010;Dbxref=GenBank:WP_003898652.1;Name=WP_003898652.1;Ontology_term=GO:0006817,GO:0035435,GO:0015415,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;go_process=phosphate ion transport|0006817||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177769.1;locus_tag=AL60_RS09010;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_003898652.1;transl_table=11 NZ_KK316846.1 RefSeq gene 706002 706832 . + . ID=gene-AL60_RS09015;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AL60_RS09015;old_locus_tag=AL60_00682 NZ_KK316846.1 Protein Homology CDS 706002 706832 . + 0 ID=cds-WP_003898653.1;Parent=gene-AL60_RS09015;Dbxref=GenBank:WP_003898653.1;Name=WP_003898653.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215448.1;locus_tag=AL60_RS09015;product=phosphate ABC transporter ATP-binding protein;protein_id=WP_003898653.1;transl_table=11 NZ_KK316846.1 RefSeq gene 706853 707977 . + . ID=gene-AL60_RS09020;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AL60_RS09020;old_locus_tag=AL60_00683 NZ_KK316846.1 Protein Homology CDS 706853 707977 . + 0 ID=cds-WP_003900236.1;Parent=gene-AL60_RS09020;Dbxref=GenBank:WP_003900236.1;Name=WP_003900236.1;Ontology_term=GO:0006817,GO:0035435,GO:0015415,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;go_process=phosphate ion transport|0006817||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177770.1;locus_tag=AL60_RS09020;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_003900236.1;transl_table=11 NZ_KK316846.1 RefSeq gene 708037 709053 . + . ID=gene-AL60_RS09025;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AL60_RS09025;old_locus_tag=AL60_00684 NZ_KK316846.1 Protein Homology CDS 708037 709053 . + 0 ID=cds-WP_003404792.1;Parent=gene-AL60_RS09025;Dbxref=GenBank:WP_003404792.1;Name=WP_003404792.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177771.1;locus_tag=AL60_RS09025;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_003404792.1;transl_table=11 NZ_KK316846.1 RefSeq gene 709055 709960 . + . ID=gene-AL60_RS09030;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AL60_RS09030;old_locus_tag=AL60_00685 NZ_KK316846.1 Protein Homology CDS 709055 709960 . + 0 ID=cds-WP_003404794.1;Parent=gene-AL60_RS09030;Dbxref=GenBank:WP_003404794.1;Name=WP_003404794.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215451.1;locus_tag=AL60_RS09030;product=phosphate ABC transporter permease PstA;protein_id=WP_003404794.1;transl_table=11 NZ_KK316846.1 RefSeq gene 709937 710758 . - . ID=gene-AL60_RS09035;Name=mku;gbkey=Gene;gene=mku;gene_biotype=protein_coding;locus_tag=AL60_RS09035;old_locus_tag=AL60_00686 NZ_KK316846.1 Protein Homology CDS 709937 710758 . - 0 ID=cds-WP_003404795.1;Parent=gene-AL60_RS09035;Dbxref=GenBank:WP_003404795.1;Name=WP_003404795.1;Ontology_term=GO:0006303,GO:0045027;gbkey=CDS;gene=mku;go_function=DNA end binding|0045027||IEA;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215452.1;locus_tag=AL60_RS09035;product=non-homologous end joining protein Ku;protein_id=WP_003404795.1;transl_table=11 NZ_KK316846.1 RefSeq gene 710874 713153 . + . ID=gene-AL60_RS09040;Name=ligD;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=AL60_RS09040;old_locus_tag=AL60_00687 NZ_KK316846.1 Protein Homology CDS 710874 713153 . + 0 ID=cds-WP_012054252.1;Parent=gene-AL60_RS09040;Dbxref=GenBank:WP_012054252.1;Name=WP_012054252.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910;gbkey=CDS;gene=ligD;go_function=DNA ligase (ATP) activity|0003910||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215453.1;locus_tag=AL60_RS09040;product=ATP-dependent DNA ligase;protein_id=WP_012054252.1;transl_table=11 NZ_KK316846.1 RefSeq gene 713150 715084 . + . ID=gene-AL60_RS09045;Name=AL60_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09045;old_locus_tag=AL60_00688 NZ_KK316846.1 Protein Homology CDS 713150 715084 . + 0 ID=cds-WP_003404801.1;Parent=gene-AL60_RS09045;Dbxref=GenBank:WP_003404801.1;Name=WP_003404801.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215454.1;locus_tag=AL60_RS09045;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_003404801.1;transl_table=11 NZ_KK316846.1 RefSeq gene 715331 716197 . - . ID=gene-AL60_RS09050;Name=AL60_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09050;old_locus_tag=AL60_00689 NZ_KK316846.1 Protein Homology CDS 715331 716197 . - 0 ID=cds-WP_003404819.1;Parent=gene-AL60_RS09050;Dbxref=GenBank:WP_003404819.1;Name=WP_003404819.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215455.1;locus_tag=AL60_RS09050;product=TIGR03619 family F420-dependent LLM class oxidoreductase;protein_id=WP_003404819.1;transl_table=11 NZ_KK316846.1 RefSeq gene 716282 717055 . - . ID=gene-AL60_RS09055;Name=AL60_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09055;old_locus_tag=AL60_00690 NZ_KK316846.1 Protein Homology CDS 716282 717055 . - 0 ID=cds-WP_003404823.1;Parent=gene-AL60_RS09055;Dbxref=GenBank:WP_003404823.1;Name=WP_003404823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215456.1;locus_tag=AL60_RS09055;product=STAS domain-containing protein;protein_id=WP_003404823.1;transl_table=11 NZ_KK316846.1 RefSeq gene 717098 717376 . + . ID=gene-AL60_RS09060;Name=AL60_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09060;old_locus_tag=AL60_00691 NZ_KK316846.1 Protein Homology CDS 717098 717376 . + 0 ID=cds-WP_003901948.1;Parent=gene-AL60_RS09060;Dbxref=GenBank:WP_003901948.1;Name=WP_003901948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215457.1;locus_tag=AL60_RS09060;product=DUF8092 domain-containing protein;protein_id=WP_003901948.1;transl_table=11 NZ_KK316846.1 RefSeq gene 717434 718474 . - . ID=gene-AL60_RS09065;Name=AL60_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09065;old_locus_tag=AL60_00692 NZ_KK316846.1 Protein Homology CDS 717434 718474 . - 0 ID=cds-WP_003898656.1;Parent=gene-AL60_RS09065;Dbxref=GenBank:WP_003898656.1;Name=WP_003898656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215458.1;locus_tag=AL60_RS09065;product=DUF4873 domain-containing protein;protein_id=WP_003898656.1;transl_table=11 NZ_KK316846.1 RefSeq gene 718503 718979 . + . ID=gene-AL60_RS09070;Name=AL60_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09070;old_locus_tag=AL60_00693 NZ_KK316846.1 Protein Homology CDS 718503 718979 . + 0 ID=cds-WP_003404828.1;Parent=gene-AL60_RS09070;Dbxref=GenBank:WP_003404828.1;Name=WP_003404828.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215459.1;locus_tag=AL60_RS09070;product=zinc finger domain-containing protein;protein_id=WP_003404828.1;transl_table=11 NZ_KK316846.1 RefSeq gene 718997 719746 . + . ID=gene-AL60_RS09075;Name=AL60_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09075;old_locus_tag=AL60_00694 NZ_KK316846.1 Protein Homology CDS 718997 719746 . + 0 ID=cds-WP_003911341.1;Parent=gene-AL60_RS09075;Dbxref=GenBank:WP_003911341.1;Name=WP_003911341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007777012.1;locus_tag=AL60_RS09075;product=SDR family oxidoreductase;protein_id=WP_003911341.1;transl_table=11 NZ_KK316846.1 RefSeq gene 719762 721423 . - . ID=gene-AL60_RS09080;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AL60_RS09080;old_locus_tag=AL60_00695 NZ_KK316846.1 Protein Homology CDS 719762 721423 . - 0 ID=cds-WP_003404830.1;Parent=gene-AL60_RS09080;Dbxref=GenBank:WP_003404830.1;Name=WP_003404830.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215461.1;locus_tag=AL60_RS09080;product=glucose-6-phosphate isomerase;protein_id=WP_003404830.1;transl_table=11 NZ_KK316846.1 RefSeq gene 722038 722268 . - . ID=gene-AL60_RS27435;Name=AL60_RS27435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27435 NZ_KK316846.1 Protein Homology CDS 722038 722268 . - 0 ID=cds-WP_003404833.1;Parent=gene-AL60_RS27435;Dbxref=GenBank:WP_003404833.1;Name=WP_003404833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404833.1;locus_tag=AL60_RS27435;product=mycolyltransferase;protein_id=WP_003404833.1;transl_table=11 NZ_KK316846.1 RefSeq gene 722185 722379 . + . ID=gene-AL60_RS25570;Name=AL60_RS25570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25570 NZ_KK316846.1 Protein Homology CDS 722185 722379 . + 0 ID=cds-WP_003404835.1;Parent=gene-AL60_RS25570;Dbxref=GenBank:WP_003404835.1;Name=WP_003404835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404835.1;locus_tag=AL60_RS25570;product=hypothetical protein;protein_id=WP_003404835.1;transl_table=11 NZ_KK316846.1 RefSeq gene 722384 722701 . - . ID=gene-AL60_RS09085;Name=AL60_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09085;old_locus_tag=AL60_00696 NZ_KK316846.1 Protein Homology CDS 722384 722701 . - 0 ID=cds-WP_003404838.1;Parent=gene-AL60_RS09085;Dbxref=GenBank:WP_003404838.1;Name=WP_003404838.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215463.1;locus_tag=AL60_RS09085;product=chorismate mutase;protein_id=WP_003404838.1;transl_table=11 NZ_KK316846.1 RefSeq gene 722998 725313 . + . ID=gene-AL60_RS09090;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=AL60_RS09090;old_locus_tag=AL60_00697 NZ_KK316846.1 Protein Homology CDS 722998 725313 . + 0 ID=cds-WP_003404859.1;Parent=gene-AL60_RS09090;Dbxref=GenBank:WP_003404859.1;Name=WP_003404859.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177772.1;locus_tag=AL60_RS09090;product=DNA helicase PcrA;protein_id=WP_003404859.1;transl_table=11 NZ_KK316846.1 RefSeq gene 725394 726392 . - . ID=gene-AL60_RS09095;Name=AL60_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09095;old_locus_tag=AL60_00698 NZ_KK316846.1 Protein Homology CDS 725394 726392 . - 0 ID=cds-WP_003404862.1;Parent=gene-AL60_RS09095;Dbxref=GenBank:WP_003404862.1;Name=WP_003404862.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215465.1;locus_tag=AL60_RS09095;product=M23 family metallopeptidase;protein_id=WP_003404862.1;transl_table=11 NZ_KK316846.1 RefSeq gene 726699 727862 . + . ID=gene-AL60_RS09100;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AL60_RS09100;old_locus_tag=AL60_00699 NZ_KK316846.1 Protein Homology CDS 726699 727862 . + 0 ID=cds-WP_003898659.1;Parent=gene-AL60_RS09100;Dbxref=GenBank:WP_003898659.1;Name=WP_003898659.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215466.1;locus_tag=AL60_RS09100;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_003898659.1;transl_table=11 NZ_KK316846.1 RefSeq gene 727884 728786 . + . ID=gene-AL60_RS09105;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=AL60_RS09105;old_locus_tag=AL60_00700 NZ_KK316846.1 Protein Homology CDS 727884 728786 . + 0 ID=cds-WP_009935735.1;Parent=gene-AL60_RS09105;Dbxref=GenBank:WP_009935735.1;Name=WP_009935735.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007776997.1;locus_tag=AL60_RS09105;product=succinate--CoA ligase subunit alpha;protein_id=WP_009935735.1;transl_table=11 NZ_KK316846.1 RefSeq gene 728849 729697 . - . ID=gene-AL60_RS09110;Name=AL60_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09110;old_locus_tag=AL60_00701 NZ_KK316846.1 Protein Homology CDS 728849 729697 . - 0 ID=cds-WP_003404873.1;Parent=gene-AL60_RS09110;Dbxref=GenBank:WP_003404873.1;Name=WP_003404873.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215468.1;locus_tag=AL60_RS09110;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003404873.1;transl_table=11 NZ_KK316846.1 RefSeq gene 729862 730773 . + . ID=gene-AL60_RS09115;Name=AL60_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09115;old_locus_tag=AL60_00702 NZ_KK316846.1 Protein Homology CDS 729862 730773 . + 0 ID=cds-WP_003404875.1;Parent=gene-AL60_RS09115;Dbxref=GenBank:WP_003404875.1;Name=WP_003404875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215469.1;locus_tag=AL60_RS09115;product=DUF5336 domain-containing protein;protein_id=WP_003404875.1;transl_table=11 NZ_KK316846.1 RefSeq gene 730813 732180 . + . ID=gene-AL60_RS09120;Name=AL60_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09120;old_locus_tag=AL60_00703 NZ_KK316846.1 Protein Homology CDS 730813 732180 . + 0 ID=cds-WP_003901049.1;Parent=gene-AL60_RS09120;Dbxref=GenBank:WP_003901049.1;Name=WP_003901049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215470.1;locus_tag=AL60_RS09120;product=cell division protein PerM;protein_id=WP_003901049.1;transl_table=11 NZ_KK316846.1 RefSeq gene 732296 732943 . + . ID=gene-AL60_RS09125;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AL60_RS09125;old_locus_tag=AL60_00704 NZ_KK316846.1 Protein Homology CDS 732296 732943 . + 0 ID=cds-WP_003898661.1;Parent=gene-AL60_RS09125;Dbxref=GenBank:WP_003898661.1;Name=WP_003898661.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215471.1;locus_tag=AL60_RS09125;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_003898661.1;transl_table=11 NZ_KK316846.1 RefSeq gene 732940 734511 . + . ID=gene-AL60_RS09130;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AL60_RS09130;old_locus_tag=AL60_00705 NZ_KK316846.1 Protein Homology CDS 732940 734511 . + 0 ID=cds-WP_003404890.1;Parent=gene-AL60_RS09130;Dbxref=GenBank:WP_003404890.1;Name=WP_003404890.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215472.1;locus_tag=AL60_RS09130;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_003404890.1;transl_table=11 NZ_KK316846.1 RefSeq gene 734618 735997 . + . ID=gene-AL60_RS09135;Name=AL60_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09135;old_locus_tag=AL60_00706 NZ_KK316846.1 Protein Homology CDS 734618 735997 . + 0 ID=cds-WP_003404892.1;Parent=gene-AL60_RS09135;Dbxref=GenBank:WP_003404892.1;Name=WP_003404892.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215473.1;locus_tag=AL60_RS09135;product=sigma 54-interacting transcriptional regulator;protein_id=WP_003404892.1;transl_table=11 NZ_KK316846.1 RefSeq gene 735990 738008 . + . ID=gene-AL60_RS09140;Name=AL60_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09140;old_locus_tag=AL60_00707 NZ_KK316846.1 Protein Homology CDS 735990 738008 . + 0 ID=cds-WP_003404895.1;Parent=gene-AL60_RS09140;Dbxref=GenBank:WP_003404895.1;Name=WP_003404895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215474.1;locus_tag=AL60_RS09140;product=vWA domain-containing protein;protein_id=WP_003404895.1;transl_table=11 NZ_KK316846.1 RefSeq gene 738062 738283 . + . ID=gene-AL60_RS09145;Name=AL60_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09145;old_locus_tag=AL60_00708 NZ_KK316846.1 Protein Homology CDS 738062 738283 . + 0 ID=cds-WP_003404898.1;Parent=gene-AL60_RS09145;Dbxref=GenBank:WP_003404898.1;Name=WP_003404898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409620.1;locus_tag=AL60_RS09145;product=antitoxin VapB9;protein_id=WP_003404898.1;transl_table=11 NZ_KK316846.1 RefSeq gene 738280 738663 . + . ID=gene-AL60_RS09150;Name=AL60_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09150;old_locus_tag=AL60_00709 NZ_KK316846.1 Protein Homology CDS 738280 738663 . + 0 ID=cds-WP_003404903.1;Parent=gene-AL60_RS09150;Dbxref=GenBank:WP_003404903.1;Name=WP_003404903.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215475.1;locus_tag=AL60_RS09150;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003404903.1;transl_table=11 NZ_KK316846.1 RefSeq gene 738809 739156 . + . ID=gene-AL60_RS09155;Name=AL60_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09155;old_locus_tag=AL60_00710 NZ_KK316846.1 Protein Homology CDS 738809 739156 . + 0 ID=cds-WP_003404907.1;Parent=gene-AL60_RS09155;Dbxref=GenBank:WP_003404907.1;Name=WP_003404907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215476.1;locus_tag=AL60_RS09155;product=hypothetical protein;protein_id=WP_003404907.1;transl_table=11 NZ_KK316846.1 RefSeq gene 739175 739849 . - . ID=gene-AL60_RS09160;Name=lprP;gbkey=Gene;gene=lprP;gene_biotype=protein_coding;locus_tag=AL60_RS09160;old_locus_tag=AL60_00711 NZ_KK316846.1 Protein Homology CDS 739175 739849 . - 0 ID=cds-WP_003898662.1;Parent=gene-AL60_RS09160;Dbxref=GenBank:WP_003898662.1;Name=WP_003898662.1;gbkey=CDS;gene=lprP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215477.1;locus_tag=AL60_RS09160;product=LppA family lipoprotein;protein_id=WP_003898662.1;transl_table=11 NZ_KK316846.1 RefSeq gene 739846 739986 . - . ID=gene-AL60_RS27440;Name=AL60_RS27440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27440 NZ_KK316846.1 Protein Homology CDS 739846 739986 . - 0 ID=cds-WP_003404912.1;Parent=gene-AL60_RS27440;Dbxref=GenBank:WP_003404912.1;Name=WP_003404912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404912.1;locus_tag=AL60_RS27440;product=hypothetical protein;protein_id=WP_003404912.1;transl_table=11 NZ_KK316846.1 RefSeq gene 740032 740985 . - . ID=gene-AL60_RS27445;Name=AL60_RS27445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27445;old_locus_tag=AL60_00712 NZ_KK316846.1 Protein Homology CDS 740032 740985 . - 0 ID=cds-WP_003914276.1;Parent=gene-AL60_RS27445;Dbxref=GenBank:WP_003914276.1;Name=WP_003914276.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018018.6;locus_tag=AL60_RS27445;product=alpha/beta hydrolase family protein;protein_id=WP_003914276.1;transl_table=11 NZ_KK316846.1 RefSeq gene 741007 741153 . + . ID=gene-AL60_RS27450;Name=AL60_RS27450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27450 NZ_KK316846.1 Protein Homology CDS 741007 741153 . + 0 ID=cds-WP_009937438.1;Parent=gene-AL60_RS27450;Dbxref=GenBank:WP_009937438.1;Name=WP_009937438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009937438.1;locus_tag=AL60_RS27450;product=hypothetical protein;protein_id=WP_009937438.1;transl_table=11 NZ_KK316846.1 RefSeq gene 741513 741932 . - . ID=gene-AL60_RS09175;Name=AL60_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09175;old_locus_tag=AL60_00714 NZ_KK316846.1 Protein Homology CDS 741513 741932 . - 0 ID=cds-WP_003404920.1;Parent=gene-AL60_RS09175;Dbxref=GenBank:WP_003404920.1;Name=WP_003404920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215480.1;locus_tag=AL60_RS09175;product=hypothetical protein;protein_id=WP_003404920.1;transl_table=11 NZ_KK316846.1 RefSeq gene 741968 742570 . - . ID=gene-AL60_RS09180;Name=AL60_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09180;old_locus_tag=AL60_00715 NZ_KK316846.1 Protein Homology CDS 741968 742570 . - 0 ID=cds-WP_003900243.1;Parent=gene-AL60_RS09180;Dbxref=GenBank:WP_003900243.1;Name=WP_003900243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215481.2;locus_tag=AL60_RS09180;product=DUF1707 SHOCT-like domain-containing protein;protein_id=WP_003900243.1;transl_table=11 NZ_KK316846.1 RefSeq gene 742710 743069 . + . ID=gene-AL60_RS09185;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=AL60_RS09185;old_locus_tag=AL60_00716 NZ_KK316846.1 Protein Homology CDS 742710 743069 . + 0 ID=cds-WP_003404935.1;Parent=gene-AL60_RS09185;Dbxref=GenBank:WP_003404935.1;Name=WP_003404935.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215482.1;locus_tag=AL60_RS09185;product=copper-sensing transcriptional repressor CsoR;protein_id=WP_003404935.1;transl_table=11 NZ_KK316846.1 RefSeq gene 743126 743422 . + . ID=gene-AL60_RS09190;Name=AL60_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09190;old_locus_tag=AL60_00717 NZ_KK316846.1 Protein Homology CDS 743126 743422 . + 0 ID=cds-WP_003404939.1;Parent=gene-AL60_RS09190;Dbxref=GenBank:WP_003404939.1;Name=WP_003404939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215483.1;locus_tag=AL60_RS09190;product=DUF1490 family protein;protein_id=WP_003404939.1;transl_table=11 NZ_KK316846.1 RefSeq gene 743478 745790 . + . ID=gene-AL60_RS09195;Name=ctpV;gbkey=Gene;gene=ctpV;gene_biotype=protein_coding;locus_tag=AL60_RS09195;old_locus_tag=AL60_00718 NZ_KK316846.1 Protein Homology CDS 743478 745790 . + 0 ID=cds-WP_009935691.1;Parent=gene-AL60_RS09195;Dbxref=GenBank:WP_009935691.1;Name=WP_009935691.1;gbkey=CDS;gene=ctpV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215484.3;locus_tag=AL60_RS09195;product=copper-translocating P-type ATPase;protein_id=WP_009935691.1;transl_table=11 NZ_KK316846.1 RefSeq gene 745787 746419 . + . ID=gene-AL60_RS09200;Name=AL60_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09200;old_locus_tag=AL60_00719 NZ_KK316846.1 Protein Homology CDS 745787 746419 . + 0 ID=cds-WP_003898666.1;Parent=gene-AL60_RS09200;Dbxref=GenBank:WP_003898666.1;Name=WP_003898666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215485.1;locus_tag=AL60_RS09200;product=DUF5134 domain-containing protein;protein_id=WP_003898666.1;transl_table=11 NZ_KK316846.1 RefSeq gene 746510 747319 . - . ID=gene-AL60_RS09205;Name=AL60_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09205;old_locus_tag=AL60_00720 NZ_KK316846.1 Protein Homology CDS 746510 747319 . - 0 ID=cds-WP_003404949.1;Parent=gene-AL60_RS09205;Dbxref=GenBank:WP_003404949.1;Name=WP_003404949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215486.1;locus_tag=AL60_RS09205;product=enoyl-CoA hydratase family protein;protein_id=WP_003404949.1;transl_table=11 NZ_KK316846.1 RefSeq gene 747319 748485 . - . ID=gene-AL60_RS09210;Name=AL60_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09210;old_locus_tag=AL60_00721 NZ_KK316846.1 Protein Homology CDS 747319 748485 . - 0 ID=cds-WP_003898667.1;Parent=gene-AL60_RS09210;Dbxref=GenBank:WP_003898667.1;Name=WP_003898667.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215487.1;locus_tag=AL60_RS09210;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003898667.1;transl_table=11 NZ_KK316846.1 RefSeq gene 748482 750485 . - . ID=gene-AL60_RS09215;Name=AL60_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09215;old_locus_tag=AL60_00722 NZ_KK316846.1 Protein Homology CDS 748482 750485 . - 0 ID=cds-WP_003900244.1;Parent=gene-AL60_RS09215;Dbxref=GenBank:WP_003900244.1;Name=WP_003900244.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215488.1;locus_tag=AL60_RS09215;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_003900244.1;transl_table=11 NZ_KK316846.1 RefSeq gene 750491 752080 . - . ID=gene-AL60_RS09220;Name=AL60_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09220;old_locus_tag=AL60_00723 NZ_KK316846.1 Protein Homology CDS 750491 752080 . - 0 ID=cds-WP_003900245.1;Parent=gene-AL60_RS09220;Dbxref=GenBank:WP_003900245.1;Name=WP_003900245.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215489.1;locus_tag=AL60_RS09220;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003900245.1;transl_table=11 NZ_KK316846.1 RefSeq gene 752083 753231 . - . ID=gene-AL60_RS09225;Name=AL60_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09225;old_locus_tag=AL60_00724 NZ_KK316846.1 Protein Homology CDS 752083 753231 . - 0 ID=cds-WP_003898670.1;Parent=gene-AL60_RS09225;Dbxref=GenBank:WP_003898670.1;Name=WP_003898670.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215490.1;locus_tag=AL60_RS09225;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003898670.1;transl_table=11 NZ_KK316846.1 RefSeq gene 753228 754910 . - . ID=gene-AL60_RS09230;Name=AL60_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09230;old_locus_tag=AL60_00725 NZ_KK316846.1 Protein Homology CDS 753228 754910 . - 0 ID=cds-WP_012054253.1;Parent=gene-AL60_RS09230;Dbxref=GenBank:WP_012054253.1;Name=WP_012054253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215491.1;locus_tag=AL60_RS09230;product=acyclic terpene utilization AtuA family protein;protein_id=WP_012054253.1;transl_table=11 NZ_KK316846.1 RefSeq gene 755108 757879 . + . ID=gene-AL60_RS09235;Name=AL60_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09235;old_locus_tag=AL60_00726 NZ_KK316846.1 Protein Homology CDS 755108 757879 . + 0 ID=cds-WP_010886098.1;Parent=gene-AL60_RS09235;Dbxref=GenBank:WP_010886098.1;Name=WP_010886098.1;Ontology_term=GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177773.1;locus_tag=AL60_RS09235;product=PecA family PE domain-processing aspartic protease;protein_id=WP_010886098.1;transl_table=11 NZ_KK316846.1 RefSeq gene 758096 759037 . - . ID=gene-AL60_RS27895;Name=AL60_RS27895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27895;old_locus_tag=AL60_00727 NZ_KK316846.1 Protein Homology CDS 758096 759037 . - 0 ID=cds-WP_009938297.1;Parent=gene-AL60_RS27895;Dbxref=GenBank:WP_009938297.1;Name=WP_009938297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177774.1;locus_tag=AL60_RS27895;product=PE-PGRS family protein;protein_id=WP_009938297.1;transl_table=11 NZ_KK316846.1 RefSeq gene 759351 759545 . - . ID=gene-AL60_RS09245;Name=AL60_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09245;old_locus_tag=AL60_00728 NZ_KK316846.1 Protein Homology CDS 759351 759545 . - 0 ID=cds-WP_003907536.1;Parent=gene-AL60_RS09245;Dbxref=GenBank:WP_003907536.1;Name=WP_003907536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215494.2;locus_tag=AL60_RS09245;product=hypothetical protein;protein_id=WP_003907536.1;transl_table=11 NZ_KK316846.1 RefSeq gene 759567 759740 . + . ID=gene-AL60_RS09250;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AL60_RS09250;old_locus_tag=AL60_00729 NZ_KK316846.1 Protein Homology CDS 759567 759740 . + 0 ID=cds-WP_003405053.1;Parent=gene-AL60_RS09250;Dbxref=GenBank:WP_003405053.1;Name=WP_003405053.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011892777.1;locus_tag=AL60_RS09250;product=50S ribosomal protein L32;protein_id=WP_003405053.1;transl_table=11 NZ_KK316846.1 RefSeq gene 759759 761132 . - . ID=gene-AL60_RS09255;Name=AL60_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09255;old_locus_tag=AL60_00730 NZ_KK316846.1 Protein Homology CDS 759759 761132 . - 0 ID=cds-WP_012054254.1;Parent=gene-AL60_RS09255;Dbxref=GenBank:WP_012054254.1;Name=WP_012054254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177775.1;locus_tag=AL60_RS09255;product=PE-PGRS family protein;protein_id=WP_012054254.1;transl_table=11 NZ_KK316846.1 RefSeq gene 761503 762189 . + . ID=gene-AL60_RS09260;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=AL60_RS09260;old_locus_tag=AL60_00731 NZ_KK316846.1 Protein Homology CDS 761503 762189 . + 0 ID=cds-WP_003916757.1;Parent=gene-AL60_RS09260;Dbxref=GenBank:WP_003916757.1;Name=WP_003916757.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215496.2;locus_tag=AL60_RS09260;product=two-component system response regulator MprA;protein_id=WP_003916757.1;transl_table=11 NZ_KK316846.1 RefSeq gene 762189 763703 . + . ID=gene-AL60_RS09265;Name=mprB;gbkey=Gene;gene=mprB;gene_biotype=protein_coding;locus_tag=AL60_RS09265;old_locus_tag=AL60_00732 NZ_KK316846.1 Protein Homology CDS 762189 763703 . + 0 ID=cds-WP_003911317.1;Parent=gene-AL60_RS09265;Dbxref=GenBank:WP_003911317.1;Name=WP_003911317.1;gbkey=CDS;gene=mprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215497.1;locus_tag=AL60_RS09265;product=two-component system sensor histidine kinase MprB;protein_id=WP_003911317.1;transl_table=11 NZ_KK316846.1 RefSeq gene 763747 765141 . + . ID=gene-AL60_RS09270;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=AL60_RS09270;old_locus_tag=AL60_00733 NZ_KK316846.1 Protein Homology CDS 763747 765141 . + 0 ID=cds-WP_003901059.1;Parent=gene-AL60_RS09270;Dbxref=GenBank:WP_003901059.1;Name=WP_003901059.1;gbkey=CDS;gene=pepD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215498.1;locus_tag=AL60_RS09270;product=serine protease PepD;protein_id=WP_003901059.1;transl_table=11 NZ_KK316846.1 RefSeq gene 765141 765686 . + . ID=gene-AL60_RS09275;Name=AL60_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09275;old_locus_tag=AL60_00734 NZ_KK316846.1 Protein Homology CDS 765141 765686 . + 0 ID=cds-WP_003405127.1;Parent=gene-AL60_RS09275;Dbxref=GenBank:WP_003405127.1;Name=WP_003405127.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215499.1;locus_tag=AL60_RS09275;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_003405127.1;transl_table=11 NZ_KK316846.1 RefSeq gene 765706 766161 . - . ID=gene-AL60_RS09280;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=AL60_RS09280;old_locus_tag=AL60_00735 NZ_KK316846.1 Protein Homology CDS 765706 766161 . - 0 ID=cds-WP_003405128.1;Parent=gene-AL60_RS09280;Dbxref=GenBank:WP_003405128.1;Name=WP_003405128.1;Ontology_term=GO:0034220,GO:0008381,GO:0016020;gbkey=CDS;gene=mscL;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215500.1;locus_tag=AL60_RS09280;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_003405128.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 766484 767229 . + . ID=gene-AL60_RS09285;Name=AL60_RS09285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS09285;old_locus_tag=AL60_00736;pseudo=true NZ_KK316846.1 Protein Homology CDS 766484 767229 . + 0 ID=cds-AL60_RS09285;Parent=gene-AL60_RS09285;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215501.1;locus_tag=AL60_RS09285;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 767222 769789 . + . ID=gene-AL60_RS09290;Name=AL60_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09290;old_locus_tag=AL60_00737 NZ_KK316846.1 Protein Homology CDS 767222 769789 . + 0 ID=cds-WP_003915882.1;Parent=gene-AL60_RS09290;Dbxref=GenBank:WP_003915882.1;Name=WP_003915882.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215502.1;locus_tag=AL60_RS09290;product=ABC transporter permease;protein_id=WP_003915882.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 769796 770956 . + . ID=gene-AL60_RS0104315;Name=AL60_RS0104315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0104315;pseudo=true NZ_KK316846.1 Protein Homology CDS 769796 770956 . + 0 ID=cds-AL60_RS0104315;Parent=gene-AL60_RS0104315;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215503.1;locus_tag=AL60_RS0104315;product=lipocalin-like domain-containing protein;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 771085 772062 . - . ID=gene-AL60_RS09295;Name=grcC;gbkey=Gene;gene=grcC;gene_biotype=protein_coding;locus_tag=AL60_RS09295;old_locus_tag=AL60_00739 NZ_KK316846.1 Protein Homology CDS 771085 772062 . - 0 ID=cds-WP_003405136.1;Parent=gene-AL60_RS09295;Dbxref=GenBank:WP_003405136.1;Name=WP_003405136.1;gbkey=CDS;gene=grcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215504.1;locus_tag=AL60_RS09295;product=polyprenyl-diphosphate synthase GrcC;protein_id=WP_003405136.1;transl_table=11 NZ_KK316846.1 RefSeq gene 772123 772779 . - . ID=gene-AL60_RS09300;Name=AL60_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09300;old_locus_tag=AL60_00740 NZ_KK316846.1 Protein Homology CDS 772123 772779 . - 0 ID=cds-WP_003906487.1;Parent=gene-AL60_RS09300;Dbxref=GenBank:WP_003906487.1;Name=WP_003906487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215505.1;locus_tag=AL60_RS09300;product=SAF domain-containing protein;protein_id=WP_003906487.1;transl_table=11 NZ_KK316846.1 RefSeq gene 772852 773184 . - . ID=gene-AL60_RS09305;Name=AL60_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09305;old_locus_tag=AL60_00741 NZ_KK316846.1 Protein Homology CDS 772852 773184 . - 0 ID=cds-WP_003405142.1;Parent=gene-AL60_RS09305;Dbxref=GenBank:WP_003405142.1;Name=WP_003405142.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215506.1;locus_tag=AL60_RS09305;product=FmdB family zinc ribbon protein;protein_id=WP_003405142.1;transl_table=11 NZ_KK316846.1 RefSeq gene 773258 773851 . - . ID=gene-AL60_RS09310;Name=AL60_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09310;old_locus_tag=AL60_00742 NZ_KK316846.1 Protein Homology CDS 773258 773851 . - 0 ID=cds-WP_003901063.1;Parent=gene-AL60_RS09310;Dbxref=GenBank:WP_003901063.1;Name=WP_003901063.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215507.1;locus_tag=AL60_RS09310;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_003901063.1;transl_table=11 NZ_KK316846.1 RefSeq gene 773952 774872 . + . ID=gene-AL60_RS09315;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AL60_RS09315;old_locus_tag=AL60_00743 NZ_KK316846.1 Protein Homology CDS 773952 774872 . + 0 ID=cds-WP_003405145.1;Parent=gene-AL60_RS09315;Dbxref=GenBank:WP_003405145.1;Name=WP_003405145.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215508.1;locus_tag=AL60_RS09315;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_003405145.1;transl_table=11 NZ_KK316846.1 RefSeq gene 774949 776229 . + . ID=gene-AL60_RS09320;Name=glp;gbkey=Gene;gene=glp;gene_biotype=protein_coding;locus_tag=AL60_RS09320;old_locus_tag=AL60_00744 NZ_KK316846.1 Protein Homology CDS 774949 776229 . + 0 ID=cds-WP_003898680.1;Parent=gene-AL60_RS09320;Dbxref=GenBank:WP_003898680.1;Name=WP_003898680.1;Ontology_term=GO:1990586;gbkey=CDS;gene=glp;go_component=divisome complex|1990586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177776.1;locus_tag=AL60_RS09320;product=molybdotransferase-like divisome protein Glp;protein_id=WP_003898680.1;transl_table=11 NZ_KK316846.1 RefSeq gene 776250 776903 . + . ID=gene-AL60_RS09325;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=AL60_RS09325;old_locus_tag=AL60_00745 NZ_KK316846.1 Protein Homology CDS 776250 776903 . + 0 ID=cds-WP_003898681.1;Parent=gene-AL60_RS09325;Dbxref=GenBank:WP_003898681.1;Name=WP_003898681.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898681.1;locus_tag=AL60_RS09325;product=GNAT family N-acetyltransferase;protein_id=WP_003898681.1;transl_table=11 NZ_KK316846.1 RefSeq gene 777064 778140 . + . ID=gene-AL60_RS09330;Name=sepX;gbkey=Gene;gene=sepX;gene_biotype=protein_coding;gene_synonym=glpR;locus_tag=AL60_RS09330;old_locus_tag=AL60_00746 NZ_KK316846.1 Protein Homology CDS 777064 778140 . + 0 ID=cds-WP_003901065.1;Parent=gene-AL60_RS09330;Dbxref=GenBank:WP_003901065.1;Name=WP_003901065.1;Ontology_term=GO:1990586;gbkey=CDS;gene=sepX;go_component=divisome complex|1990586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215511.1;locus_tag=AL60_RS09330;product=divisome protein SepX/GlpR;protein_id=WP_003901065.1;transl_table=11 NZ_KK316846.1 RefSeq gene 778191 778266 . + . ID=gene-AL60_RS09335;Name=AL60_RS09335;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS09335;old_locus_tag=AL60_00747 NZ_KK316846.1 tRNAscan-SE tRNA 778191 778266 . + . ID=rna-AL60_RS09335;Parent=gene-AL60_RS09335;anticodon=(pos:778224..778226);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS09335;product=tRNA-Ala NZ_KK316846.1 tRNAscan-SE exon 778191 778266 . + . ID=exon-AL60_RS09335-1;Parent=rna-AL60_RS09335;anticodon=(pos:778224..778226);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS09335;product=tRNA-Ala NZ_KK316846.1 RefSeq gene 778541 778792 . + . ID=gene-AL60_RS0104320;Name=AL60_RS0104320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104320 NZ_KK316846.1 Protein Homology CDS 778541 778792 . + 0 ID=cds-WP_003405150.1;Parent=gene-AL60_RS0104320;Dbxref=GenBank:WP_003405150.1;Name=WP_003405150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030028.1;locus_tag=AL60_RS0104320;product=hypothetical protein;protein_id=WP_003405150.1;transl_table=11 NZ_KK316846.1 RefSeq gene 778853 779062 . - . ID=gene-AL60_RS0104325;Name=AL60_RS0104325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104325 NZ_KK316846.1 Protein Homology CDS 778853 779062 . - 0 ID=cds-WP_003405160.1;Parent=gene-AL60_RS0104325;Dbxref=GenBank:WP_003405160.1;Name=WP_003405160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627059.1;locus_tag=AL60_RS0104325;product=hypothetical protein;protein_id=WP_003405160.1;transl_table=11 NZ_KK316846.1 RefSeq gene 779066 779458 . - . ID=gene-AL60_RS0104330;Name=AL60_RS0104330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104330 NZ_KK316846.1 Protein Homology CDS 779066 779458 . - 0 ID=cds-WP_009935838.1;Parent=gene-AL60_RS0104330;Dbxref=GenBank:WP_009935838.1;Name=WP_009935838.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292599.1;locus_tag=AL60_RS0104330;product=class I SAM-dependent methyltransferase;protein_id=WP_009935838.1;transl_table=11 NZ_KK316846.1 RefSeq gene 779428 780429 . + . ID=gene-AL60_RS09340;Name=AL60_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09340;old_locus_tag=AL60_00749 NZ_KK316846.1 Protein Homology CDS 779428 780429 . + 0 ID=cds-WP_003405164.1;Parent=gene-AL60_RS09340;Dbxref=GenBank:WP_003405164.1;Name=WP_003405164.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215513.1;locus_tag=AL60_RS09340;product=GNAT family N-acetyltransferase;protein_id=WP_003405164.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 780426 780515 . + . ID=gene-AL60_RS27055;Name=AL60_RS27055;end_range=780515,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27055;partial=true;pseudo=true;start_range=.,780426 NZ_KK316846.1 Protein Homology CDS 780426 780515 . + 0 ID=cds-AL60_RS27055;Parent=gene-AL60_RS27055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=780515,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872787.1;locus_tag=AL60_RS27055;partial=true;product=DUF5642 family protein;pseudo=true;start_range=.,780426;transl_table=11 NZ_KK316846.1 RefSeq gene 780546 781205 . + . ID=gene-AL60_RS09345;Name=AL60_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09345;old_locus_tag=AL60_00750 NZ_KK316846.1 Protein Homology CDS 780546 781205 . + 0 ID=cds-WP_003911352.1;Parent=gene-AL60_RS09345;Dbxref=GenBank:WP_003911352.1;Name=WP_003911352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911352.1;locus_tag=AL60_RS09345;product=DUF5642 family protein;protein_id=WP_003911352.1;transl_table=11 NZ_KK316846.1 RefSeq gene 781211 781807 . - . ID=gene-AL60_RS09350;Name=AL60_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09350;old_locus_tag=AL60_00751 NZ_KK316846.1 Protein Homology CDS 781211 781807 . - 0 ID=cds-WP_003913180.1;Parent=gene-AL60_RS09350;Dbxref=GenBank:WP_003913180.1;Name=WP_003913180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632682.1;locus_tag=AL60_RS09350;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_003913180.1;transl_table=11 NZ_KK316846.1 RefSeq gene 781865 783073 . + . ID=gene-AL60_RS09355;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=AL60_RS09355;old_locus_tag=AL60_00752 NZ_KK316846.1 Protein Homology CDS 781865 783073 . + 0 ID=cds-WP_012054255.1;Parent=gene-AL60_RS09355;Dbxref=GenBank:WP_012054255.1;Name=WP_012054255.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215517.1;locus_tag=AL60_RS09355;product=arginine deiminase;protein_id=WP_012054255.1;transl_table=11 NZ_KK316846.1 RefSeq gene 783108 784619 . - . ID=gene-AL60_RS09360;Name=AL60_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09360;old_locus_tag=AL60_00753 NZ_KK316846.1 Protein Homology CDS 783108 784619 . - 0 ID=cds-WP_003901066.1;Parent=gene-AL60_RS09360;Dbxref=GenBank:WP_003901066.1;Name=WP_003901066.1;Ontology_term=GO:0004169;gbkey=CDS;go_function=dolichyl-phosphate-mannose-protein mannosyltransferase activity|0004169||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215518.1;locus_tag=AL60_RS09360;product=dolichyl-phosphate-mannose--protein mannosyltransferase;protein_id=WP_003901066.1;transl_table=11 NZ_KK316846.1 RefSeq gene 784702 785559 . + . ID=gene-AL60_RS09365;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=AL60_RS09365;old_locus_tag=AL60_00754 NZ_KK316846.1 Protein Homology CDS 784702 785559 . + 0 ID=cds-WP_003405173.1;Parent=gene-AL60_RS09365;Dbxref=GenBank:WP_003405173.1;Name=WP_003405173.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215519.1;locus_tag=AL60_RS09365;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_003405173.1;transl_table=11 NZ_KK316846.1 RefSeq gene 785569 786828 . - . ID=gene-AL60_RS09370;Name=AL60_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09370;old_locus_tag=AL60_00755 NZ_KK316846.1 Protein Homology CDS 785569 786828 . - 0 ID=cds-WP_003910253.1;Parent=gene-AL60_RS09370;Dbxref=GenBank:WP_003910253.1;Name=WP_003910253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215520.1;locus_tag=AL60_RS09370;product=hypothetical protein;protein_id=WP_003910253.1;transl_table=11 NZ_KK316846.1 RefSeq gene 786902 788188 . - . ID=gene-AL60_RS09375;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=AL60_RS09375;old_locus_tag=AL60_00756 NZ_KK316846.1 Protein Homology CDS 786902 788188 . - 0 ID=cds-WP_003405178.1;Parent=gene-AL60_RS09375;Dbxref=GenBank:WP_003405178.1;Name=WP_003405178.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405178.1;locus_tag=AL60_RS09375;product=aminodeoxychorismate synthase component I;protein_id=WP_003405178.1;transl_table=11 NZ_KK316846.1 RefSeq gene 788394 790097 . + . ID=gene-AL60_RS09380;Name=AL60_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09380;old_locus_tag=AL60_00757 NZ_KK316846.1 Protein Homology CDS 788394 790097 . + 0 ID=cds-WP_003405180.1;Parent=gene-AL60_RS09380;Dbxref=GenBank:WP_003405180.1;Name=WP_003405180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215522.1;locus_tag=AL60_RS09380;product=hypothetical protein;protein_id=WP_003405180.1;transl_table=11 NZ_KK316846.1 RefSeq gene 790124 791683 . - . ID=gene-AL60_RS09385;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AL60_RS09385;old_locus_tag=AL60_00758 NZ_KK316846.1 Protein Homology CDS 790124 791683 . - 0 ID=cds-WP_003405183.1;Parent=gene-AL60_RS09385;Dbxref=GenBank:WP_003405183.1;Name=WP_003405183.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215523.1;locus_tag=AL60_RS09385;product=methionine--tRNA ligase;protein_id=WP_003405183.1;transl_table=11 NZ_KK316846.1 RefSeq gene 791703 792563 . + . ID=gene-AL60_RS09390;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=AL60_RS09390;old_locus_tag=AL60_00759 NZ_KK316846.1 Protein Homology CDS 791703 792563 . + 0 ID=cds-WP_003898688.1;Parent=gene-AL60_RS09390;Dbxref=GenBank:WP_003898688.1;Name=WP_003898688.1;gbkey=CDS;gene=tatD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898688.1;locus_tag=AL60_RS09390;product=TatD family hydrolase;protein_id=WP_003898688.1;transl_table=11 NZ_KK316846.1 RefSeq gene 792732 793859 . + . ID=gene-AL60_RS09395;Name=rpfB;gbkey=Gene;gene=rpfB;gene_biotype=protein_coding;locus_tag=AL60_RS09395;old_locus_tag=AL60_00760 NZ_KK316846.1 Protein Homology CDS 792732 793859 . + 0 ID=cds-WP_023637366.1;Parent=gene-AL60_RS09395;Dbxref=GenBank:WP_023637366.1;Name=WP_023637366.1;gbkey=CDS;gene=rpfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031657245.1;locus_tag=AL60_RS09395;product=resuscitation-promoting factor protein RpfB;protein_id=WP_023637366.1;transl_table=11 NZ_KK316846.1 RefSeq gene 793832 794785 . + . ID=gene-AL60_RS09400;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AL60_RS09400;old_locus_tag=AL60_00761 NZ_KK316846.1 Protein Homology CDS 793832 794785 . + 0 ID=cds-WP_003405191.1;Parent=gene-AL60_RS09400;Dbxref=GenBank:WP_003405191.1;Name=WP_003405191.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215526.1;locus_tag=AL60_RS09400;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_003405191.1;transl_table=11 NZ_KK316846.1 RefSeq gene 794835 795791 . + . ID=gene-AL60_RS09405;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=AL60_RS09405;old_locus_tag=AL60_00762 NZ_KK316846.1 Protein Homology CDS 794835 795791 . + 0 ID=cds-WP_003898690.1;Parent=gene-AL60_RS09405;Dbxref=GenBank:WP_003898690.1;Name=WP_003898690.1;Ontology_term=GO:0016114,GO:0005524,GO:0050515;gbkey=CDS;gene=ispE;go_function=ATP binding|0005524||IEA,4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912970.1;locus_tag=AL60_RS09405;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_003898690.1;transl_table=11 NZ_KK316846.1 RefSeq gene 795808 796101 . + . ID=gene-AL60_RS09410;Name=AL60_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09410;old_locus_tag=AL60_00763 NZ_KK316846.1 Protein Homology CDS 795808 796101 . + 0 ID=cds-WP_003900254.1;Parent=gene-AL60_RS09410;Dbxref=GenBank:WP_003900254.1;Name=WP_003900254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215528.1;locus_tag=AL60_RS09410;product=hypothetical protein;protein_id=WP_003900254.1;transl_table=11 NZ_KK316846.1 RefSeq gene 796305 797939 . + . ID=gene-AL60_RS09415;Name=AL60_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09415;old_locus_tag=AL60_00764 NZ_KK316846.1 Protein Homology CDS 796305 797939 . + 0 ID=cds-WP_003405202.1;Parent=gene-AL60_RS09415;Dbxref=GenBank:WP_003405202.1;Name=WP_003405202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215529.1;locus_tag=AL60_RS09415;product=fatty acyl-AMP ligase;protein_id=WP_003405202.1;transl_table=11 NZ_KK316846.1 RefSeq gene 798013 798588 . - . ID=gene-AL60_RS09420;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AL60_RS09420;old_locus_tag=AL60_00765 NZ_KK316846.1 Protein Homology CDS 798013 798588 . - 0 ID=cds-WP_003405251.1;Parent=gene-AL60_RS09420;Dbxref=GenBank:WP_003405251.1;Name=WP_003405251.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215530.1;locus_tag=AL60_RS09420;product=aminoacyl-tRNA hydrolase;protein_id=WP_003405251.1;transl_table=11 NZ_KK316846.1 RefSeq gene 798601 799248 . - . ID=gene-AL60_RS09425;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=AL60_RS09425;old_locus_tag=AL60_00766 NZ_KK316846.1 Protein Homology CDS 798601 799248 . - 0 ID=cds-WP_003405254.1;Parent=gene-AL60_RS09425;Dbxref=GenBank:WP_003405254.1;Name=WP_003405254.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215531.1;locus_tag=AL60_RS09425;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_003405254.1;transl_table=11 NZ_KK316846.1 RefSeq gene 799465 800073 . - . ID=gene-AL60_RS09430;Name=AL60_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09430;old_locus_tag=AL60_00767 NZ_KK316846.1 Protein Homology CDS 799465 800073 . - 0 ID=cds-WP_042507738.1;Parent=gene-AL60_RS09430;Dbxref=GenBank:WP_042507738.1;Name=WP_042507738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014941374.1;locus_tag=AL60_RS09430;product=LpqN/LpqT family lipoprotein;protein_id=WP_042507738.1;transl_table=11 NZ_KK316846.1 RefSeq gene 800181 801161 . - . ID=gene-AL60_RS09435;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=AL60_RS09435;old_locus_tag=AL60_00768 NZ_KK316846.1 Protein Homology CDS 800181 801161 . - 0 ID=cds-WP_003405263.1;Parent=gene-AL60_RS09435;Dbxref=GenBank:WP_003405263.1;Name=WP_003405263.1;Ontology_term=GO:0009058,GO:0000287,GO:0004749;gbkey=CDS;gene=prsA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215533.1;locus_tag=AL60_RS09435;product=ribose-phosphate diphosphokinase;protein_id=WP_003405263.1;transl_table=11 NZ_KK316846.1 RefSeq gene 801253 802740 . - . ID=gene-AL60_RS09440;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AL60_RS09440;old_locus_tag=AL60_00769 NZ_KK316846.1 Protein Homology CDS 801253 802740 . - 0 ID=cds-WP_003405267.1;Parent=gene-AL60_RS09440;Dbxref=GenBank:WP_003405267.1;Name=WP_003405267.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215534.1;locus_tag=AL60_RS09440;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_003405267.1;transl_table=11 NZ_KK316846.1 RefSeq gene 802756 802827 . - . ID=gene-AL60_RS09445;Name=AL60_RS09445;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS09445;old_locus_tag=AL60_00770 NZ_KK316846.1 tRNAscan-SE tRNA 802756 802827 . - . ID=rna-AL60_RS09445;Parent=gene-AL60_RS09445;anticodon=(pos:complement(802792..802794));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS09445;product=tRNA-Gln NZ_KK316846.1 tRNAscan-SE exon 802756 802827 . - . ID=exon-AL60_RS09445-1;Parent=rna-AL60_RS09445;anticodon=(pos:complement(802792..802794));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS09445;product=tRNA-Gln NZ_KK316846.1 RefSeq gene 802995 803588 . + . ID=gene-AL60_RS09450;Name=AL60_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09450;old_locus_tag=AL60_00771 NZ_KK316846.1 Protein Homology CDS 802995 803588 . + 0 ID=cds-WP_003405271.1;Parent=gene-AL60_RS09450;Dbxref=GenBank:WP_003405271.1;Name=WP_003405271.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215535.1;locus_tag=AL60_RS09450;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003405271.1;transl_table=11 NZ_KK316846.1 RefSeq gene 803647 807351 . + . ID=gene-AL60_RS09455;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=AL60_RS09455;old_locus_tag=AL60_00772 NZ_KK316846.1 Protein Homology CDS 803647 807351 . + 0 ID=cds-WP_003405273.1;Parent=gene-AL60_RS09455;Dbxref=GenBank:WP_003405273.1;Name=WP_003405273.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215536.1;locus_tag=AL60_RS09455;product=transcription-repair coupling factor;protein_id=WP_003405273.1;transl_table=11 NZ_KK316846.1 RefSeq gene 807351 808328 . + . ID=gene-AL60_RS09460;Name=AL60_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09460;old_locus_tag=AL60_00773 NZ_KK316846.1 Protein Homology CDS 807351 808328 . + 0 ID=cds-WP_003405276.1;Parent=gene-AL60_RS09460;Dbxref=GenBank:WP_003405276.1;Name=WP_003405276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215537.1;locus_tag=AL60_RS09460;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_003405276.1;transl_table=11 NZ_KK316846.1 RefSeq gene 808416 809147 . + . ID=gene-AL60_RS09465;Name=lpqU;gbkey=Gene;gene=lpqU;gene_biotype=protein_coding;locus_tag=AL60_RS09465;old_locus_tag=AL60_00774 NZ_KK316846.1 Protein Homology CDS 808416 809147 . + 0 ID=cds-WP_003900256.1;Parent=gene-AL60_RS09465;Dbxref=GenBank:WP_003900256.1;Name=WP_003900256.1;Ontology_term=GO:0004553;gbkey=CDS;gene=lpqU;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215538.1;locus_tag=AL60_RS09465;product=lytic transglycosylase domain-containing protein;protein_id=WP_003900256.1;transl_table=11 NZ_KK316846.1 RefSeq gene 809244 810533 . + . ID=gene-AL60_RS09470;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AL60_RS09470;old_locus_tag=AL60_00775 NZ_KK316846.1 Protein Homology CDS 809244 810533 . + 0 ID=cds-WP_003898693.1;Parent=gene-AL60_RS09470;Dbxref=GenBank:WP_003898693.1;Name=WP_003898693.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215539.1;locus_tag=AL60_RS09470;product=phosphopyruvate hydratase;protein_id=WP_003898693.1;transl_table=11 NZ_KK316846.1 RefSeq gene 810538 811224 . + . ID=gene-AL60_RS09475;Name=AL60_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09475;old_locus_tag=AL60_00776 NZ_KK316846.1 Protein Homology CDS 810538 811224 . + 0 ID=cds-WP_003405293.1;Parent=gene-AL60_RS09475;Dbxref=GenBank:WP_003405293.1;Name=WP_003405293.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215540.1;locus_tag=AL60_RS09475;product=FtsB family cell division protein;protein_id=WP_003405293.1;transl_table=11 NZ_KK316846.1 RefSeq gene 811217 811708 . + . ID=gene-AL60_RS09480;Name=AL60_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09480;old_locus_tag=AL60_00777 NZ_KK316846.1 Protein Homology CDS 811217 811708 . + 0 ID=cds-WP_003405296.1;Parent=gene-AL60_RS09480;Dbxref=GenBank:WP_003405296.1;Name=WP_003405296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901072.1;locus_tag=AL60_RS09480;product=DUF501 domain-containing protein;protein_id=WP_003405296.1;transl_table=11 NZ_KK316846.1 RefSeq gene 811699 812658 . + . ID=gene-AL60_RS09485;Name=ppx2;gbkey=Gene;gene=ppx2;gene_biotype=protein_coding;locus_tag=AL60_RS09485;old_locus_tag=AL60_00778 NZ_KK316846.1 Protein Homology CDS 811699 812658 . + 0 ID=cds-WP_003405299.1;Parent=gene-AL60_RS09485;Dbxref=GenBank:WP_003405299.1;Name=WP_003405299.1;gbkey=CDS;gene=ppx2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215542.1;locus_tag=AL60_RS09485;product=exopolyphosphatase Ppx2;protein_id=WP_003405299.1;transl_table=11 NZ_KK316846.1 RefSeq gene 813107 813787 . - . ID=gene-AL60_RS09490;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=AL60_RS09490;old_locus_tag=AL60_00779 NZ_KK316846.1 Protein Homology CDS 813107 813787 . - 0 ID=cds-WP_003405305.1;Parent=gene-AL60_RS09490;Dbxref=GenBank:WP_003405305.1;Name=WP_003405305.1;gbkey=CDS;gene=kdpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215543.1;locus_tag=AL60_RS09490;product=two-component system response regulator KdpE;protein_id=WP_003405305.1;transl_table=11 NZ_KK316846.1 RefSeq gene 813784 816366 . - . ID=gene-AL60_RS09495;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=AL60_RS09495;old_locus_tag=AL60_00780 NZ_KK316846.1 Protein Homology CDS 813784 816366 . - 0 ID=cds-WP_003898694.1;Parent=gene-AL60_RS09495;Dbxref=GenBank:WP_003898694.1;Name=WP_003898694.1;gbkey=CDS;gene=kdpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215544.1;locus_tag=AL60_RS09495;product=sensor histidine kinase KdpD;protein_id=WP_003898694.1;transl_table=11 NZ_KK316846.1 RefSeq gene 816457 816603 . + . ID=gene-AL60_RS0104345;Name=AL60_RS0104345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104345 NZ_KK316846.1 Protein Homology CDS 816457 816603 . + 0 ID=cds-WP_003405313.1;Parent=gene-AL60_RS0104345;Dbxref=GenBank:WP_003405313.1;Name=WP_003405313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405313.1;locus_tag=AL60_RS0104345;product=hypothetical protein;protein_id=WP_003405313.1;transl_table=11 NZ_KK316846.1 RefSeq gene 816600 816692 . + . ID=gene-AL60_RS09500;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=AL60_RS09500;old_locus_tag=AL60_00781 NZ_KK316846.1 Protein Homology CDS 816600 816692 . + 0 ID=cds-WP_003405316.1;Parent=gene-AL60_RS09500;Dbxref=GenBank:WP_003405316.1;Name=WP_003405316.1;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177636.1;locus_tag=AL60_RS09500;product=K(+)-transporting ATPase subunit F;protein_id=WP_003405316.1;transl_table=11 NZ_KK316846.1 RefSeq gene 816692 818407 . + . ID=gene-AL60_RS09505;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=AL60_RS09505;old_locus_tag=AL60_00782 NZ_KK316846.1 Protein Homology CDS 816692 818407 . + 0 ID=cds-WP_003405318.1;Parent=gene-AL60_RS09505;Dbxref=GenBank:WP_003405318.1;Name=WP_003405318.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215545.1;locus_tag=AL60_RS09505;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_003405318.1;transl_table=11 NZ_KK316846.1 RefSeq gene 818404 820533 . + . ID=gene-AL60_RS09510;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=AL60_RS09510;old_locus_tag=AL60_00783 NZ_KK316846.1 Protein Homology CDS 818404 820533 . + 0 ID=cds-WP_003405320.1;Parent=gene-AL60_RS09510;Dbxref=GenBank:WP_003405320.1;Name=WP_003405320.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215546.1;locus_tag=AL60_RS09510;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_003405320.1;transl_table=11 NZ_KK316846.1 RefSeq gene 820533 821102 . + . ID=gene-AL60_RS09515;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=AL60_RS09515;old_locus_tag=AL60_00784 NZ_KK316846.1 Protein Homology CDS 820533 821102 . + 0 ID=cds-WP_003405322.1;Parent=gene-AL60_RS09515;Dbxref=GenBank:WP_003405322.1;Name=WP_003405322.1;gbkey=CDS;gene=kdpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215547.1;locus_tag=AL60_RS09515;product=K(+)-transporting ATPase subunit C;protein_id=WP_003405322.1;transl_table=11 NZ_KK316846.1 RefSeq gene 821106 822635 . - . ID=gene-AL60_RS09520;Name=trcS;gbkey=Gene;gene=trcS;gene_biotype=protein_coding;locus_tag=AL60_RS09520;old_locus_tag=AL60_00785 NZ_KK316846.1 Protein Homology CDS 821106 822635 . - 0 ID=cds-WP_012054256.1;Parent=gene-AL60_RS09520;Dbxref=GenBank:WP_012054256.1;Name=WP_012054256.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;gene=trcS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215548.1;locus_tag=AL60_RS09520;product=two component system sensor histidine kinase TrcS;protein_id=WP_012054256.1;transl_table=11 NZ_KK316846.1 RefSeq gene 822643 823416 . - . ID=gene-AL60_RS09525;Name=trcR;gbkey=Gene;gene=trcR;gene_biotype=protein_coding;locus_tag=AL60_RS09525;old_locus_tag=AL60_00786 NZ_KK316846.1 Protein Homology CDS 822643 823416 . - 0 ID=cds-WP_003405328.1;Parent=gene-AL60_RS09525;Dbxref=GenBank:WP_003405328.1;Name=WP_003405328.1;gbkey=CDS;gene=trcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215549.1;locus_tag=AL60_RS09525;product=two-component system response regulator TrcR;protein_id=WP_003405328.1;transl_table=11 NZ_KK316846.1 RefSeq pseudogene 823598 825038 . - . ID=gene-AL60_RS25600;Name=AL60_RS25600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS25600;pseudo=true NZ_KK316846.1 Protein Homology CDS 823598 825038 . - 0 ID=cds-AL60_RS25600;Parent=gene-AL60_RS25600;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612244.1;locus_tag=AL60_RS25600;product=ISNCY family transposase;pseudo=true;transl_table=11 NZ_KK316846.1 RefSeq gene 825224 825508 . - . ID=gene-AL60_RS09540;Name=esxV;gbkey=Gene;gene=esxV;gene_biotype=protein_coding;locus_tag=AL60_RS09540;old_locus_tag=AL60_00790 NZ_KK316846.1 Protein Homology CDS 825224 825508 . - 0 ID=cds-WP_003898699.1;Parent=gene-AL60_RS09540;Dbxref=GenBank:WP_003898699.1;Name=WP_003898699.1;gbkey=CDS;gene=esxV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215553.1;locus_tag=AL60_RS09540;product=type VII secretion system protein EsxV;protein_id=WP_003898699.1;transl_table=11 ##sequence-region NZ_KK316847.1 1 409643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316847.1 RefSeq region 1 409643 . + . ID=NZ_KK316847.1:1..409643;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316847.1 RefSeq gene 1 662 . + . ID=gene-AL60_RS09545;Name=AL60_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09545;old_locus_tag=AL60_00791;partial=true;start_range=.,1 NZ_KK316847.1 Protein Homology CDS 1 662 . + 2 ID=cds-WP_031682496.1;Parent=gene-AL60_RS09545;Dbxref=GenBank:WP_031682496.1;Name=WP_031682496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177965.1;locus_tag=AL60_RS09545;partial=true;product=hypothetical protein;protein_id=WP_031682496.1;start_range=.,1;transl_table=11 NZ_KK316847.1 RefSeq gene 1223 2869 . - . ID=gene-AL60_RS09550;Name=AL60_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09550;old_locus_tag=AL60_00792 NZ_KK316847.1 Protein Homology CDS 1223 2869 . - 0 ID=cds-WP_003901660.1;Parent=gene-AL60_RS09550;Dbxref=GenBank:WP_003901660.1;Name=WP_003901660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177983.1;locus_tag=AL60_RS09550;product=acyl-CoA synthetase;protein_id=WP_003901660.1;transl_table=11 NZ_KK316847.1 RefSeq gene 2943 3734 . + . ID=gene-AL60_RS09555;Name=AL60_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09555;old_locus_tag=AL60_00793 NZ_KK316847.1 Protein Homology CDS 2943 3734 . + 0 ID=cds-WP_003419179.1;Parent=gene-AL60_RS09555;Dbxref=GenBank:WP_003419179.1;Name=WP_003419179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218033.1;locus_tag=AL60_RS09555;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003419179.1;transl_table=11 NZ_KK316847.1 RefSeq gene 3830 4669 . + . ID=gene-AL60_RS09560;Name=AL60_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09560;old_locus_tag=AL60_00794 NZ_KK316847.1 Protein Homology CDS 3830 4669 . + 0 ID=cds-WP_003419184.1;Parent=gene-AL60_RS09560;Dbxref=GenBank:WP_003419184.1;Name=WP_003419184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218034.1;locus_tag=AL60_RS09560;product=hypothetical protein;protein_id=WP_003419184.1;transl_table=11 NZ_KK316847.1 RefSeq gene 4724 5920 . - . ID=gene-AL60_RS09565;Name=cyp142;gbkey=Gene;gene=cyp142;gene_biotype=protein_coding;locus_tag=AL60_RS09565;old_locus_tag=AL60_00795 NZ_KK316847.1 Protein Homology CDS 4724 5920 . - 0 ID=cds-WP_003900082.1;Parent=gene-AL60_RS09565;Dbxref=GenBank:WP_003900082.1;Name=WP_003900082.1;gbkey=CDS;gene=cyp142;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218035.1;locus_tag=AL60_RS09565;product=steroid C26-monooxygenase Cyp142;protein_id=WP_003900082.1;transl_table=11 NZ_KK316847.1 RefSeq gene 5949 6659 . + . ID=gene-AL60_RS09570;Name=AL60_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09570;old_locus_tag=AL60_00796 NZ_KK316847.1 Protein Homology CDS 5949 6659 . + 0 ID=cds-WP_003419190.1;Parent=gene-AL60_RS09570;Dbxref=GenBank:WP_003419190.1;Name=WP_003419190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218036.1;locus_tag=AL60_RS09570;product=acetoacetate decarboxylase family protein;protein_id=WP_003419190.1;transl_table=11 NZ_KK316847.1 RefSeq gene 6724 7755 . - . ID=gene-AL60_RS09575;Name=AL60_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09575;old_locus_tag=AL60_00797 NZ_KK316847.1 Protein Homology CDS 6724 7755 . - 0 ID=cds-WP_003419192.1;Parent=gene-AL60_RS09575;Dbxref=GenBank:WP_003419192.1;Name=WP_003419192.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015628990.1;locus_tag=AL60_RS09575;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003419192.1;transl_table=11 NZ_KK316847.1 RefSeq gene 7827 8831 . + . ID=gene-AL60_RS09580;Name=AL60_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09580;old_locus_tag=AL60_00798 NZ_KK316847.1 Protein Homology CDS 7827 8831 . + 0 ID=cds-WP_003900085.1;Parent=gene-AL60_RS09580;Dbxref=GenBank:WP_003900085.1;Name=WP_003900085.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487624.1;locus_tag=AL60_RS09580;product=Zn-ribbon domain-containing OB-fold protein;protein_id=WP_003900085.1;transl_table=11 NZ_KK316847.1 RefSeq gene 8847 9911 . + . ID=gene-AL60_RS09585;Name=AL60_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09585;old_locus_tag=AL60_00799 NZ_KK316847.1 Protein Homology CDS 8847 9911 . + 0 ID=cds-WP_003419199.1;Parent=gene-AL60_RS09585;Dbxref=GenBank:WP_003419199.1;Name=WP_003419199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218039.1;locus_tag=AL60_RS09585;product=thiolase domain-containing protein;protein_id=WP_003419199.1;transl_table=11 NZ_KK316847.1 RefSeq gene 9928 11112 . + . ID=gene-AL60_RS09590;Name=AL60_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09590;old_locus_tag=AL60_00800 NZ_KK316847.1 Protein Homology CDS 9928 11112 . + 0 ID=cds-WP_003901662.1;Parent=gene-AL60_RS09590;Dbxref=GenBank:WP_003901662.1;Name=WP_003901662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218040.1;locus_tag=AL60_RS09590;product=thiolase domain-containing protein;protein_id=WP_003901662.1;transl_table=11 NZ_KK316847.1 RefSeq gene 11154 12185 . + . ID=gene-AL60_RS09595;Name=AL60_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09595;old_locus_tag=AL60_00801 NZ_KK316847.1 Protein Homology CDS 11154 12185 . + 0 ID=cds-WP_003419207.1;Parent=gene-AL60_RS09595;Dbxref=GenBank:WP_003419207.1;Name=WP_003419207.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218041.1;locus_tag=AL60_RS09595;product=NHL repeat-containing protein;protein_id=WP_003419207.1;transl_table=11 NZ_KK316847.1 RefSeq gene 12199 12723 . - . ID=gene-AL60_RS09600;Name=AL60_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09600;old_locus_tag=AL60_00802 NZ_KK316847.1 Protein Homology CDS 12199 12723 . - 0 ID=cds-WP_003419208.1;Parent=gene-AL60_RS09600;Dbxref=GenBank:WP_003419208.1;Name=WP_003419208.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218042.1;locus_tag=AL60_RS09600;product=gamma carbonic anhydrase family protein;protein_id=WP_003419208.1;transl_table=11 NZ_KK316847.1 RefSeq gene 12838 13998 . + . ID=gene-AL60_RS09605;Name=kshA;gbkey=Gene;gene=kshA;gene_biotype=protein_coding;locus_tag=AL60_RS09605;old_locus_tag=AL60_00803 NZ_KK316847.1 Protein Homology CDS 12838 13998 . + 0 ID=cds-WP_003419211.1;Parent=gene-AL60_RS09605;Dbxref=GenBank:WP_003419211.1;Name=WP_003419211.1;gbkey=CDS;gene=kshA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218043.1;locus_tag=AL60_RS09605;product=3-ketosteroid-9-alpha-hydroxylase subunit KshA;protein_id=WP_003419211.1;transl_table=11 NZ_KK316847.1 RefSeq gene 14004 14453 . + . ID=gene-AL60_RS09610;Name=AL60_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09610;old_locus_tag=AL60_00804 NZ_KK316847.1 Protein Homology CDS 14004 14453 . + 0 ID=cds-WP_003419215.1;Parent=gene-AL60_RS09610;Dbxref=GenBank:WP_003419215.1;Name=WP_003419215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218044.1;locus_tag=AL60_RS09610;product=hypothetical protein;protein_id=WP_003419215.1;transl_table=11 NZ_KK316847.1 RefSeq gene 14878 15591 . - . ID=gene-AL60_RS09615;Name=AL60_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09615;old_locus_tag=AL60_00805 NZ_KK316847.1 Protein Homology CDS 14878 15591 . - 0 ID=cds-WP_003900086.1;Parent=gene-AL60_RS09615;Dbxref=GenBank:WP_003900086.1;Name=WP_003900086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218045.1;locus_tag=AL60_RS09615;product=hypothetical protein;protein_id=WP_003900086.1;transl_table=11 NZ_KK316847.1 RefSeq gene 15822 16019 . + . ID=gene-AL60_RS09620;Name=AL60_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09620 NZ_KK316847.1 Protein Homology CDS 15822 16019 . + 0 ID=cds-WP_003908266.1;Parent=gene-AL60_RS09620;Dbxref=GenBank:WP_003908266.1;Name=WP_003908266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908266.1;locus_tag=AL60_RS09620;product=hypothetical protein;protein_id=WP_003908266.1;transl_table=11 NZ_KK316847.1 RefSeq gene 16283 17437 . - . ID=gene-AL60_RS09625;Name=AL60_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09625;old_locus_tag=AL60_00806 NZ_KK316847.1 Protein Homology CDS 16283 17437 . - 0 ID=cds-WP_003419222.1;Parent=gene-AL60_RS09625;Dbxref=GenBank:WP_003419222.1;Name=WP_003419222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218046.1;locus_tag=AL60_RS09625;product=TLR2-mediated response inhibitor;protein_id=WP_003419222.1;transl_table=11 NZ_KK316847.1 RefSeq gene 17437 18219 . - . ID=gene-AL60_RS09630;Name=AL60_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09630;old_locus_tag=AL60_00807 NZ_KK316847.1 Protein Homology CDS 17437 18219 . - 0 ID=cds-WP_003419223.1;Parent=gene-AL60_RS09630;Dbxref=GenBank:WP_003419223.1;Name=WP_003419223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218047.1;locus_tag=AL60_RS09630;product=SDR family oxidoreductase;protein_id=WP_003419223.1;transl_table=11 NZ_KK316847.1 RefSeq gene 18216 19343 . - . ID=gene-AL60_RS09635;Name=AL60_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09635;old_locus_tag=AL60_00808 NZ_KK316847.1 Protein Homology CDS 18216 19343 . - 0 ID=cds-WP_003900087.1;Parent=gene-AL60_RS09635;Dbxref=GenBank:WP_003900087.1;Name=WP_003900087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218048.1;locus_tag=AL60_RS09635;product=hypothetical protein;protein_id=WP_003900087.1;transl_table=11 NZ_KK316847.1 RefSeq gene 19742 20962 . + . ID=gene-AL60_RS09640;Name=AL60_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09640;old_locus_tag=AL60_00809 NZ_KK316847.1 Protein Homology CDS 19742 20962 . + 0 ID=cds-WP_003419226.1;Parent=gene-AL60_RS09640;Dbxref=GenBank:WP_003419226.1;Name=WP_003419226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177984.1;locus_tag=AL60_RS09640;product=PPE family protein;protein_id=WP_003419226.1;transl_table=11 NZ_KK316847.1 RefSeq gene 21104 22852 . - . ID=gene-AL60_RS09645;Name=AL60_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09645;old_locus_tag=AL60_00810 NZ_KK316847.1 Protein Homology CDS 21104 22852 . - 0 ID=cds-WP_003900088.1;Parent=gene-AL60_RS09645;Dbxref=GenBank:WP_003900088.1;Name=WP_003900088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177985.1;locus_tag=AL60_RS09645;product=PPE family protein;protein_id=WP_003900088.1;transl_table=11 NZ_KK316847.1 RefSeq gene 22951 23991 . - . ID=gene-AL60_RS09650;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=AL60_RS09650;old_locus_tag=AL60_00811 NZ_KK316847.1 Protein Homology CDS 22951 23991 . - 0 ID=cds-WP_003419250.1;Parent=gene-AL60_RS09650;Dbxref=GenBank:WP_003419250.1;Name=WP_003419250.1;Ontology_term=GO:0009056,GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218051.1;locus_tag=AL60_RS09650;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_003419250.1;transl_table=11 NZ_KK316847.1 RefSeq gene 23988 24899 . - . ID=gene-AL60_RS09655;Name=hsaG;gbkey=Gene;gene=hsaG;gene_biotype=protein_coding;locus_tag=AL60_RS09655;old_locus_tag=AL60_00812 NZ_KK316847.1 Protein Homology CDS 23988 24899 . - 0 ID=cds-WP_003419251.1;Parent=gene-AL60_RS09655;Dbxref=GenBank:WP_003419251.1;Name=WP_003419251.1;Ontology_term=GO:0009056,GO:0008774;gbkey=CDS;gene=hsaG;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218052.1;locus_tag=AL60_RS09655;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_003419251.1;transl_table=11 NZ_KK316847.1 RefSeq gene 24910 25695 . - . ID=gene-AL60_RS09660;Name=hsaE;gbkey=Gene;gene=hsaE;gene_biotype=protein_coding;locus_tag=AL60_RS09660;old_locus_tag=AL60_00813 NZ_KK316847.1 Protein Homology CDS 24910 25695 . - 0 ID=cds-WP_003419252.1;Parent=gene-AL60_RS09660;Dbxref=GenBank:WP_003419252.1;Name=WP_003419252.1;Ontology_term=GO:0008684,GO:0030145;gbkey=CDS;gene=hsaE;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218053.1;locus_tag=AL60_RS09660;product=2-keto-4-pentenoate hydratase;protein_id=WP_003419252.1;transl_table=11 NZ_KK316847.1 RefSeq gene 25768 27459 . + . ID=gene-AL60_RS09665;Name=kstD;gbkey=Gene;gene=kstD;gene_biotype=protein_coding;locus_tag=AL60_RS09665;old_locus_tag=AL60_00814 NZ_KK316847.1 Protein Homology CDS 25768 27459 . + 0 ID=cds-WP_003419253.1;Parent=gene-AL60_RS09665;Dbxref=GenBank:WP_003419253.1;Name=WP_003419253.1;Ontology_term=GO:0006694,GO:0016042,GO:0047571;gbkey=CDS;gene=kstD;go_function=3-oxosteroid 1-dehydrogenase activity|0047571||IEA;go_process=steroid biosynthetic process|0006694||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218054.1;locus_tag=AL60_RS09665;product=3-oxosteroid 1-dehydrogenase;protein_id=WP_003419253.1;transl_table=11 NZ_KK316847.1 RefSeq gene 27461 28321 . + . ID=gene-AL60_RS09670;Name=AL60_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09670;old_locus_tag=AL60_00815 NZ_KK316847.1 Protein Homology CDS 27461 28321 . + 0 ID=cds-WP_003419285.1;Parent=gene-AL60_RS09670;Dbxref=GenBank:WP_003419285.1;Name=WP_003419285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177986.1;locus_tag=AL60_RS09670;product=dehydrogenase;protein_id=WP_003419285.1;transl_table=11 NZ_KK316847.1 RefSeq gene 28458 29897 . + . ID=gene-AL60_RS09675;Name=AL60_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09675;old_locus_tag=AL60_00816 NZ_KK316847.1 Protein Homology CDS 28458 29897 . + 0 ID=cds-WP_003900090.1;Parent=gene-AL60_RS09675;Dbxref=GenBank:WP_003900090.1;Name=WP_003900090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177987.1;locus_tag=AL60_RS09675;product=PPE family protein;protein_id=WP_003900090.1;transl_table=11 NZ_KK316847.1 RefSeq gene 29898 31058 . - . ID=gene-AL60_RS09680;Name=AL60_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09680;old_locus_tag=AL60_00817 NZ_KK316847.1 Protein Homology CDS 29898 31058 . - 0 ID=cds-WP_003419287.1;Parent=gene-AL60_RS09680;Dbxref=GenBank:WP_003419287.1;Name=WP_003419287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218057.1;locus_tag=AL60_RS09680;product=lipid-transfer protein;protein_id=WP_003419287.1;transl_table=11 NZ_KK316847.1 RefSeq gene 31058 31447 . - . ID=gene-AL60_RS09685;Name=chsH1;gbkey=Gene;gene=chsH1;gene_biotype=protein_coding;locus_tag=AL60_RS09685;old_locus_tag=AL60_00818 NZ_KK316847.1 Protein Homology CDS 31058 31447 . - 0 ID=cds-WP_003419290.1;Parent=gene-AL60_RS09685;Dbxref=GenBank:WP_003419290.1;Name=WP_003419290.1;gbkey=CDS;gene=chsH1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218058.1;locus_tag=AL60_RS09685;product=3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-CoA hydratase subunit beta ChsH1;protein_id=WP_003419290.1;transl_table=11 NZ_KK316847.1 RefSeq gene 31444 32379 . - . ID=gene-AL60_RS09690;Name=chsH2;gbkey=Gene;gene=chsH2;gene_biotype=protein_coding;locus_tag=AL60_RS09690;old_locus_tag=AL60_00819 NZ_KK316847.1 Protein Homology CDS 31444 32379 . - 0 ID=cds-WP_003419293.1;Parent=gene-AL60_RS09690;Dbxref=GenBank:WP_003419293.1;Name=WP_003419293.1;gbkey=CDS;gene=chsH2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218059.1;locus_tag=AL60_RS09690;product=3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-CoA hydratase subunit alpha ChsH2;protein_id=WP_003419293.1;transl_table=11 NZ_KK316847.1 RefSeq gene 32376 33539 . - . ID=gene-AL60_RS09695;Name=fadE29;gbkey=Gene;gene=fadE29;gene_biotype=protein_coding;locus_tag=AL60_RS09695;old_locus_tag=AL60_00820 NZ_KK316847.1 Protein Homology CDS 32376 33539 . - 0 ID=cds-WP_003419296.1;Parent=gene-AL60_RS09695;Dbxref=GenBank:WP_003419296.1;Name=WP_003419296.1;gbkey=CDS;gene=fadE29;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218060.1;locus_tag=AL60_RS09695;product=acyl-CoA dehydrogenase FadE29;protein_id=WP_003419296.1;transl_table=11 NZ_KK316847.1 RefSeq gene 33524 34543 . - . ID=gene-AL60_RS09700;Name=fadE28;gbkey=Gene;gene=fadE28;gene_biotype=protein_coding;locus_tag=AL60_RS09700;old_locus_tag=AL60_00821 NZ_KK316847.1 Protein Homology CDS 33524 34543 . - 0 ID=cds-WP_003907080.1;Parent=gene-AL60_RS09700;Dbxref=GenBank:WP_003907080.1;Name=WP_003907080.1;gbkey=CDS;gene=fadE28;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218061.1;locus_tag=AL60_RS09700;product=acyl-CoA dehydrogenase FadE28;protein_id=WP_003907080.1;transl_table=11 NZ_KK316847.1 RefSeq gene 34543 35796 . - . ID=gene-AL60_RS09705;Name=cyp125;gbkey=Gene;gene=cyp125;gene_biotype=protein_coding;locus_tag=AL60_RS09705;old_locus_tag=AL60_00822 NZ_KK316847.1 Protein Homology CDS 34543 35796 . - 0 ID=cds-WP_003912260.1;Parent=gene-AL60_RS09705;Dbxref=GenBank:WP_003912260.1;Name=WP_003912260.1;gbkey=CDS;gene=cyp125;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938697.1;locus_tag=AL60_RS09705;product=steroid C26-monooxygenase Cyp125;protein_id=WP_003912260.1;transl_table=11 NZ_KK316847.1 RefSeq gene 35956 37131 . + . ID=gene-AL60_RS09710;Name=AL60_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09710;old_locus_tag=AL60_00823 NZ_KK316847.1 Protein Homology CDS 35956 37131 . + 0 ID=cds-WP_003419307.1;Parent=gene-AL60_RS09710;Dbxref=GenBank:WP_003419307.1;Name=WP_003419307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218063.1;locus_tag=AL60_RS09710;product=steroid 3-ketoacyl-CoA thiolase;protein_id=WP_003419307.1;transl_table=11 NZ_KK316847.1 RefSeq gene 37243 37698 . + . ID=gene-AL60_RS09715;Name=ddn;gbkey=Gene;gene=ddn;gene_biotype=protein_coding;locus_tag=AL60_RS09715;old_locus_tag=AL60_00824 NZ_KK316847.1 Protein Homology CDS 37243 37698 . + 0 ID=cds-WP_003419309.1;Parent=gene-AL60_RS09715;Dbxref=GenBank:WP_003419309.1;Name=WP_003419309.1;gbkey=CDS;gene=ddn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218064.1;locus_tag=AL60_RS09715;product=deazaflavin-dependent nitroreductase Ddn;protein_id=WP_003419309.1;transl_table=11 NZ_KK316847.1 RefSeq gene 37781 38695 . - . ID=gene-AL60_RS09720;Name=AL60_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09720;old_locus_tag=AL60_00825 NZ_KK316847.1 Protein Homology CDS 37781 38695 . - 0 ID=cds-WP_031721482.1;Parent=gene-AL60_RS09720;Dbxref=GenBank:WP_031721482.1;Name=WP_031721482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218065.1;locus_tag=AL60_RS09720;product=SDR family oxidoreductase;protein_id=WP_031721482.1;transl_table=11 NZ_KK316847.1 RefSeq gene 38718 39497 . - . ID=gene-AL60_RS09725;Name=AL60_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09725;old_locus_tag=AL60_00826 NZ_KK316847.1 Protein Homology CDS 38718 39497 . - 0 ID=cds-WP_003419313.1;Parent=gene-AL60_RS09725;Dbxref=GenBank:WP_003419313.1;Name=WP_003419313.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218066.1;locus_tag=AL60_RS09725;product=SDR family oxidoreductase;protein_id=WP_003419313.1;transl_table=11 NZ_KK316847.1 RefSeq gene 39552 40295 . + . ID=gene-AL60_RS09730;Name=echA20;gbkey=Gene;gene=echA20;gene_biotype=protein_coding;locus_tag=AL60_RS09730;old_locus_tag=AL60_00827 NZ_KK316847.1 Protein Homology CDS 39552 40295 . + 0 ID=cds-WP_003419315.1;Parent=gene-AL60_RS09730;Dbxref=GenBank:WP_003419315.1;Name=WP_003419315.1;gbkey=CDS;gene=echA20;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218067.1;locus_tag=AL60_RS09730;product=(7aS)-7a-methyl-1%2C5-dioxo-2%2C3%2C5%2C6%2C7%2C7a-hexahydro-1H-indene-carboxyl-CoA hydrolase;protein_id=WP_003419315.1;transl_table=11 NZ_KK316847.1 RefSeq gene 40295 41173 . + . ID=gene-AL60_RS09735;Name=ipdA;gbkey=Gene;gene=ipdA;gene_biotype=protein_coding;locus_tag=AL60_RS09735;old_locus_tag=AL60_00828 NZ_KK316847.1 Protein Homology CDS 40295 41173 . + 0 ID=cds-WP_003900094.1;Parent=gene-AL60_RS09735;Dbxref=GenBank:WP_003900094.1;Name=WP_003900094.1;gbkey=CDS;gene=ipdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218068.1;locus_tag=AL60_RS09735;product=cholesterol ring-cleaving hydrolase subunit IpdA;protein_id=WP_003900094.1;transl_table=11 NZ_KK316847.1 RefSeq gene 41170 41922 . + . ID=gene-AL60_RS09740;Name=ipdB;gbkey=Gene;gene=ipdB;gene_biotype=protein_coding;locus_tag=AL60_RS09740;old_locus_tag=AL60_00829 NZ_KK316847.1 Protein Homology CDS 41170 41922 . + 0 ID=cds-WP_003419321.1;Parent=gene-AL60_RS09740;Dbxref=GenBank:WP_003419321.1;Name=WP_003419321.1;gbkey=CDS;gene=ipdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218069.1;locus_tag=AL60_RS09740;product=cholesterol ring-cleaving hydrolase subunit IpdB;protein_id=WP_003419321.1;transl_table=11 NZ_KK316847.1 RefSeq gene 42020 43087 . + . ID=gene-AL60_RS09745;Name=ipdC;gbkey=Gene;gene=ipdC;gene_biotype=protein_coding;locus_tag=AL60_RS09745;old_locus_tag=AL60_00830 NZ_KK316847.1 Protein Homology CDS 42020 43087 . + 0 ID=cds-WP_003419324.1;Parent=gene-AL60_RS09745;Dbxref=GenBank:WP_003419324.1;Name=WP_003419324.1;gbkey=CDS;gene=ipdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218070.1;locus_tag=AL60_RS09745;product=(3aS%2C4S%2C5R%2C7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxyl-CoA dehydrogenase;protein_id=WP_003419324.1;transl_table=11 NZ_KK316847.1 RefSeq gene 43084 45141 . + . ID=gene-AL60_RS09750;Name=fdxB;gbkey=Gene;gene=fdxB;gene_biotype=protein_coding;locus_tag=AL60_RS09750;old_locus_tag=AL60_00831 NZ_KK316847.1 Protein Homology CDS 43084 45141 . + 0 ID=cds-WP_003419325.1;Parent=gene-AL60_RS09750;Dbxref=GenBank:WP_003419325.1;Name=WP_003419325.1;Ontology_term=GO:0006629;gbkey=CDS;gene=fdxB;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218071.1;locus_tag=AL60_RS09750;product=fatty acid desaturase;protein_id=WP_003419325.1;transl_table=11 NZ_KK316847.1 RefSeq gene 45229 46098 . - . ID=gene-AL60_RS09755;Name=AL60_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09755;old_locus_tag=AL60_00832 NZ_KK316847.1 Protein Homology CDS 45229 46098 . - 0 ID=cds-WP_003900096.1;Parent=gene-AL60_RS09755;Dbxref=GenBank:WP_003900096.1;Name=WP_003900096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218072.1;locus_tag=AL60_RS09755;product=DUF559 domain-containing protein;protein_id=WP_003900096.1;transl_table=11 NZ_KK316847.1 RefSeq gene 46203 47363 . - . ID=gene-AL60_RS09760;Name=fadA6;gbkey=Gene;gene=fadA6;gene_biotype=protein_coding;locus_tag=AL60_RS09760;old_locus_tag=AL60_00833 NZ_KK316847.1 Protein Homology CDS 46203 47363 . - 0 ID=cds-WP_003419328.1;Parent=gene-AL60_RS09760;Dbxref=GenBank:WP_003419328.1;Name=WP_003419328.1;gbkey=CDS;gene=fadA6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218073.1;locus_tag=AL60_RS09760;product=steroid 3-ketoacyl-CoA thiolase FadA6;protein_id=WP_003419328.1;transl_table=11 NZ_KK316847.1 RefSeq gene 47428 48030 . - . ID=gene-AL60_RS09765;Name=kstR2;gbkey=Gene;gene=kstR2;gene_biotype=protein_coding;locus_tag=AL60_RS09765;old_locus_tag=AL60_00834 NZ_KK316847.1 Protein Homology CDS 47428 48030 . - 0 ID=cds-WP_003419329.1;Parent=gene-AL60_RS09765;Dbxref=GenBank:WP_003419329.1;Name=WP_003419329.1;gbkey=CDS;gene=kstR2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218074.1;locus_tag=AL60_RS09765;product=TetR family transcriptional regulator KstR2;protein_id=WP_003419329.1;transl_table=11 NZ_KK316847.1 RefSeq gene 48379 50034 . + . ID=gene-AL60_RS09770;Name=AL60_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09770;old_locus_tag=AL60_00835 NZ_KK316847.1 Protein Homology CDS 48379 50034 . + 0 ID=cds-WP_009938100.1;Parent=gene-AL60_RS09770;Dbxref=GenBank:WP_009938100.1;Name=WP_009938100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177988.1;locus_tag=AL60_RS09770;product=PPE family protein;protein_id=WP_009938100.1;transl_table=11 NZ_KK316847.1 RefSeq gene 50043 50831 . - . ID=gene-AL60_RS09775;Name=ipdF;gbkey=Gene;gene=ipdF;gene_biotype=protein_coding;locus_tag=AL60_RS09775;old_locus_tag=AL60_00836 NZ_KK316847.1 Protein Homology CDS 50043 50831 . - 0 ID=cds-WP_003900097.1;Parent=gene-AL60_RS09775;Dbxref=GenBank:WP_003900097.1;Name=WP_003900097.1;gbkey=CDS;gene=ipdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218076.1;locus_tag=AL60_RS09775;product=(5R%2C7aS)-5-hydroxy-7a-methyl-1-oxo-2%2C3%2C5%2C6%2C7%2C7a-hexahydro-1H-indene-carboxyl-CoA reductase;protein_id=WP_003900097.1;transl_table=11 NZ_KK316847.1 RefSeq gene 50828 51985 . - . ID=gene-AL60_RS09780;Name=ipdE1;gbkey=Gene;gene=ipdE1;gene_biotype=protein_coding;gene_synonym=fadE30;locus_tag=AL60_RS09780;old_locus_tag=AL60_00837 NZ_KK316847.1 Protein Homology CDS 50828 51985 . - 0 ID=cds-WP_003419340.1;Parent=gene-AL60_RS09780;Dbxref=GenBank:WP_003419340.1;Name=WP_003419340.1;gbkey=CDS;gene=ipdE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218077.1;locus_tag=AL60_RS09780;product=acyl-CoA dehydrogenase IpdE1;protein_id=WP_003419340.1;transl_table=11 NZ_KK316847.1 RefSeq gene 52033 53556 . + . ID=gene-AL60_RS09785;Name=fadD3;gbkey=Gene;gene=fadD3;gene_biotype=protein_coding;locus_tag=AL60_RS09785;old_locus_tag=AL60_00838 NZ_KK316847.1 Protein Homology CDS 52033 53556 . + 0 ID=cds-WP_003900098.1;Parent=gene-AL60_RS09785;Dbxref=GenBank:WP_003900098.1;Name=WP_003900098.1;gbkey=CDS;gene=fadD3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218078.1;locus_tag=AL60_RS09785;product=3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydro-1H-inden-4-yl)propanoate--CoA ligase FadD3;protein_id=WP_003900098.1;transl_table=11 NZ_KK316847.1 RefSeq gene 53557 54690 . + . ID=gene-AL60_RS09790;Name=AL60_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09790;old_locus_tag=AL60_00839 NZ_KK316847.1 Protein Homology CDS 53557 54690 . + 0 ID=cds-WP_003419346.1;Parent=gene-AL60_RS09790;Dbxref=GenBank:WP_003419346.1;Name=WP_003419346.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218079.1;locus_tag=AL60_RS09790;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003419346.1;transl_table=11 NZ_KK316847.1 RefSeq gene 54687 55646 . + . ID=gene-AL60_RS09795;Name=AL60_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09795;old_locus_tag=AL60_00840 NZ_KK316847.1 Protein Homology CDS 54687 55646 . + 0 ID=cds-WP_003900712.1;Parent=gene-AL60_RS09795;Dbxref=GenBank:WP_003900712.1;Name=WP_003900712.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218080.1;locus_tag=AL60_RS09795;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003900712.1;transl_table=11 NZ_KK316847.1 RefSeq gene 55643 56599 . + . ID=gene-AL60_RS09800;Name=ipdE2;gbkey=Gene;gene=ipdE2;gene_biotype=protein_coding;gene_synonym=fadE33;locus_tag=AL60_RS09800;old_locus_tag=AL60_00841 NZ_KK316847.1 Protein Homology CDS 55643 56599 . + 0 ID=cds-WP_012054370.1;Parent=gene-AL60_RS09800;Dbxref=GenBank:WP_012054370.1;Name=WP_012054370.1;Ontology_term=GO:0006707,GO:0003995,GO:0050660;gbkey=CDS;gene=ipdE2;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cholesterol catabolic process|0006707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218081.1;locus_tag=AL60_RS09800;product=acyl-CoA dehydrogenase IpdE2;protein_id=WP_012054370.1;transl_table=11 NZ_KK316847.1 RefSeq gene 56596 57762 . + . ID=gene-AL60_RS09805;Name=aspB;gbkey=Gene;gene=aspB;gene_biotype=protein_coding;locus_tag=AL60_RS09805;old_locus_tag=AL60_00842 NZ_KK316847.1 Protein Homology CDS 56596 57762 . + 0 ID=cds-WP_003419356.1;Parent=gene-AL60_RS09805;Dbxref=GenBank:WP_003419356.1;Name=WP_003419356.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;gene=aspB;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218082.1;locus_tag=AL60_RS09805;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_003419356.1;transl_table=11 NZ_KK316847.1 RefSeq gene 57727 58578 . - . ID=gene-AL60_RS09810;Name=nat;gbkey=Gene;gene=nat;gene_biotype=protein_coding;locus_tag=AL60_RS09810;old_locus_tag=AL60_00843 NZ_KK316847.1 Protein Homology CDS 57727 58578 . - 0 ID=cds-WP_003419364.1;Parent=gene-AL60_RS09810;Dbxref=GenBank:WP_003419364.1;Name=WP_003419364.1;gbkey=CDS;gene=nat;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177989.1;locus_tag=AL60_RS09810;product=arylamine N-acetyltransferase;protein_id=WP_003419364.1;transl_table=11 NZ_KK316847.1 RefSeq gene 58563 58829 . - . ID=gene-AL60_RS09815;Name=AL60_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09815;old_locus_tag=AL60_00844 NZ_KK316847.1 Protein Homology CDS 58563 58829 . - 0 ID=cds-WP_003419367.1;Parent=gene-AL60_RS09815;Dbxref=GenBank:WP_003419367.1;Name=WP_003419367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177990.1;locus_tag=AL60_RS09815;product=hypothetical protein;protein_id=WP_003419367.1;transl_table=11 NZ_KK316847.1 RefSeq gene 58860 59030 . - . ID=gene-AL60_RS27060;Name=AL60_RS27060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27060 NZ_KK316847.1 Protein Homology CDS 58860 59030 . - 0 ID=cds-WP_003906149.1;Parent=gene-AL60_RS27060;Dbxref=GenBank:WP_003906149.1;Name=WP_003906149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003906149.1;locus_tag=AL60_RS27060;product=hypothetical protein;protein_id=WP_003906149.1;transl_table=11 NZ_KK316847.1 RefSeq gene 59115 59678 . - . ID=gene-AL60_RS09820;Name=hsaB;gbkey=Gene;gene=hsaB;gene_biotype=protein_coding;locus_tag=AL60_RS09820;old_locus_tag=AL60_00845 NZ_KK316847.1 Protein Homology CDS 59115 59678 . - 0 ID=cds-WP_003900713.1;Parent=gene-AL60_RS09820;Dbxref=GenBank:WP_003900713.1;Name=WP_003900713.1;Ontology_term=GO:0009056,GO:0016042,GO:0036382;gbkey=CDS;gene=hsaB;go_function=flavin reductase (NADH) activity|0036382||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218084.1;locus_tag=AL60_RS09820;product=3-hydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione monooxygenase reductase subunit;protein_id=WP_003900713.1;transl_table=11 NZ_KK316847.1 RefSeq gene 59693 60595 . - . ID=gene-AL60_RS09825;Name=hsaC;gbkey=Gene;gene=hsaC;gene_biotype=protein_coding;gene_synonym=bphC;locus_tag=AL60_RS09825;old_locus_tag=AL60_00846 NZ_KK316847.1 Protein Homology CDS 59693 60595 . - 0 ID=cds-WP_003419378.1;Parent=gene-AL60_RS09825;Dbxref=GenBank:WP_003419378.1;Name=WP_003419378.1;Ontology_term=GO:0009056,GO:0016042,GO:0047071;gbkey=CDS;gene=hsaC;go_function=3%2C4-dihydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione 4%2C5-dioxygenase activity|0047071||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218085.1;locus_tag=AL60_RS09825;product=iron-dependent extradiol dioxygenase HsaC;protein_id=WP_003419378.1;transl_table=11 NZ_KK316847.1 RefSeq gene 60592 61467 . - . ID=gene-AL60_RS09830;Name=hsaD;gbkey=Gene;gene=hsaD;gene_biotype=protein_coding;gene_synonym=bphD;locus_tag=AL60_RS09830;old_locus_tag=AL60_00847 NZ_KK316847.1 Protein Homology CDS 60592 61467 . - 0 ID=cds-WP_003419381.1;Parent=gene-AL60_RS09830;Dbxref=GenBank:WP_003419381.1;Name=WP_003419381.1;Ontology_term=GO:0009056,GO:0016042,GO:0102296;gbkey=CDS;gene=hsaD;go_function=4%2C5-9%2C10-diseco-3-hydroxy-5%2C9%2C17-trioxoandrosta-1(10)%2C2-diene-4-oate hydrolase activity|0102296||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218086.1;locus_tag=AL60_RS09830;product=4%2C5:9%2C10-diseco-3-hydroxy-5%2C9%2C17-trioxoandrosta-1(10)%2C2-diene-4-oate hydrolase;protein_id=WP_003419381.1;transl_table=11 NZ_KK316847.1 RefSeq gene 61482 62666 . - . ID=gene-AL60_RS09835;Name=hsaA;gbkey=Gene;gene=hsaA;gene_biotype=protein_coding;locus_tag=AL60_RS09835;old_locus_tag=AL60_00848 NZ_KK316847.1 Protein Homology CDS 61482 62666 . - 0 ID=cds-WP_003900101.1;Parent=gene-AL60_RS09835;Dbxref=GenBank:WP_003900101.1;Name=WP_003900101.1;Ontology_term=GO:0009056,GO:0016042,GO:0036383;gbkey=CDS;gene=hsaA;go_function=3-hydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione monooxygenase activity|0036383||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218087.1;locus_tag=AL60_RS09835;product=3-hydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione monooxygenase oxygenase subunit;protein_id=WP_003900101.1;transl_table=11 NZ_KK316847.1 RefSeq gene 62813 63889 . + . ID=gene-AL60_RS09840;Name=kshB;gbkey=Gene;gene=kshB;gene_biotype=protein_coding;locus_tag=AL60_RS09840;old_locus_tag=AL60_00849 NZ_KK316847.1 Protein Homology CDS 62813 63889 . + 0 ID=cds-WP_003900102.1;Parent=gene-AL60_RS09840;Dbxref=GenBank:WP_003900102.1;Name=WP_003900102.1;gbkey=CDS;gene=kshB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218088.1;locus_tag=AL60_RS09840;product=3-ketosteroid-9-alpha-hydroxylase reductase subunit;protein_id=WP_003900102.1;transl_table=11 NZ_KK316847.1 RefSeq gene 63907 64437 . + . ID=gene-AL60_RS09845;Name=AL60_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09845;old_locus_tag=AL60_00850 NZ_KK316847.1 Protein Homology CDS 63907 64437 . + 0 ID=cds-WP_003419389.1;Parent=gene-AL60_RS09845;Dbxref=GenBank:WP_003419389.1;Name=WP_003419389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218089.1;locus_tag=AL60_RS09845;product=hypothetical protein;protein_id=WP_003419389.1;transl_table=11 NZ_KK316847.1 RefSeq gene 64473 66608 . - . ID=gene-AL60_RS09850;Name=AL60_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09850;old_locus_tag=AL60_00851 NZ_KK316847.1 Protein Homology CDS 64473 66608 . - 0 ID=cds-WP_003419394.1;Parent=gene-AL60_RS09850;Dbxref=GenBank:WP_003419394.1;Name=WP_003419394.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218090.1;locus_tag=AL60_RS09850;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003419394.1;transl_table=11 NZ_KK316847.1 RefSeq gene 66880 67479 . + . ID=gene-AL60_RS09855;Name=kstR;gbkey=Gene;gene=kstR;gene_biotype=protein_coding;locus_tag=AL60_RS09855;old_locus_tag=AL60_00852 NZ_KK316847.1 Protein Homology CDS 66880 67479 . + 0 ID=cds-WP_003419397.1;Parent=gene-AL60_RS09855;Dbxref=GenBank:WP_003419397.1;Name=WP_003419397.1;Ontology_term=GO:0003677;gbkey=CDS;gene=kstR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218091.3;locus_tag=AL60_RS09855;product=cholesterol catabolism transcriptional regulator KstR;protein_id=WP_003419397.1;transl_table=11 NZ_KK316847.1 RefSeq gene 67485 68564 . - . ID=gene-AL60_RS09860;Name=AL60_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09860;old_locus_tag=AL60_00853 NZ_KK316847.1 Protein Homology CDS 67485 68564 . - 0 ID=cds-WP_003419400.1;Parent=gene-AL60_RS09860;Dbxref=GenBank:WP_003419400.1;Name=WP_003419400.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218092.1;locus_tag=AL60_RS09860;product=Rv3575c family transcriptional regulator;protein_id=WP_003419400.1;transl_table=11 NZ_KK316847.1 RefSeq gene 68754 69467 . + . ID=gene-AL60_RS09865;Name=lppH;gbkey=Gene;gene=lppH;gene_biotype=protein_coding;locus_tag=AL60_RS09865;old_locus_tag=AL60_00854 NZ_KK316847.1 Protein Homology CDS 68754 69467 . + 0 ID=cds-WP_003900105.1;Parent=gene-AL60_RS09865;Dbxref=GenBank:WP_003900105.1;Name=WP_003900105.1;gbkey=CDS;gene=lppH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177991.1;locus_tag=AL60_RS09865;product=sensor domain-containing protein;protein_id=WP_003900105.1;transl_table=11 NZ_KK316847.1 RefSeq gene 69604 70524 . + . ID=gene-AL60_RS09870;Name=AL60_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09870;old_locus_tag=AL60_00855 NZ_KK316847.1 Protein Homology CDS 69604 70524 . + 0 ID=cds-WP_003900106.1;Parent=gene-AL60_RS09870;Dbxref=GenBank:WP_003900106.1;Name=WP_003900106.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900106.1;locus_tag=AL60_RS09870;product=MBL fold metallo-hydrolase;protein_id=WP_003900106.1;transl_table=11 NZ_KK316847.1 RefSeq gene 70538 71779 . + . ID=gene-AL60_RS09875;Name=AL60_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09875;old_locus_tag=AL60_00856 NZ_KK316847.1 Protein Homology CDS 70538 71779 . + 0 ID=cds-WP_003419420.1;Parent=gene-AL60_RS09875;Dbxref=GenBank:WP_003419420.1;Name=WP_003419420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218095.1;locus_tag=AL60_RS09875;product=SLC13 family permease;protein_id=WP_003419420.1;transl_table=11 NZ_KK316847.1 RefSeq gene 71821 72789 . - . ID=gene-AL60_RS09880;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=AL60_RS09880;old_locus_tag=AL60_00857 NZ_KK316847.1 Protein Homology CDS 71821 72789 . - 0 ID=cds-WP_003900107.1;Parent=gene-AL60_RS09880;Dbxref=GenBank:WP_003900107.1;Name=WP_003900107.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218096.1;locus_tag=AL60_RS09880;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_003900107.1;transl_table=11 NZ_KK316847.1 RefSeq gene 72790 74199 . - . ID=gene-AL60_RS09885;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AL60_RS09885;old_locus_tag=AL60_00858 NZ_KK316847.1 Protein Homology CDS 72790 74199 . - 0 ID=cds-WP_003900108.1;Parent=gene-AL60_RS09885;Dbxref=GenBank:WP_003900108.1;Name=WP_003900108.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177992.1;locus_tag=AL60_RS09885;product=cysteine--tRNA ligase;protein_id=WP_003900108.1;transl_table=11 NZ_KK316847.1 RefSeq gene 74264 74743 . - . ID=gene-AL60_RS09890;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AL60_RS09890;old_locus_tag=AL60_00859 NZ_KK316847.1 Protein Homology CDS 74264 74743 . - 0 ID=cds-WP_003419432.1;Parent=gene-AL60_RS09890;Dbxref=GenBank:WP_003419432.1;Name=WP_003419432.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218098.1;locus_tag=AL60_RS09890;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_003419432.1;transl_table=11 NZ_KK316847.1 RefSeq gene 74740 75435 . - . ID=gene-AL60_RS09895;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AL60_RS09895;old_locus_tag=AL60_00860 NZ_KK316847.1 Protein Homology CDS 74740 75435 . - 0 ID=cds-WP_003419436.1;Parent=gene-AL60_RS09895;Dbxref=GenBank:WP_003419436.1;Name=WP_003419436.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218099.1;locus_tag=AL60_RS09895;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_003419436.1;transl_table=11 NZ_KK316847.1 RefSeq gene 75452 75940 . - . ID=gene-AL60_RS09900;Name=carD;gbkey=Gene;gene=carD;gene_biotype=protein_coding;locus_tag=AL60_RS09900;old_locus_tag=AL60_00861 NZ_KK316847.1 Protein Homology CDS 75452 75940 . - 0 ID=cds-WP_003419482.1;Parent=gene-AL60_RS09900;Dbxref=GenBank:WP_003419482.1;Name=WP_003419482.1;gbkey=CDS;gene=carD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218100.1;locus_tag=AL60_RS09900;product=RNA polymerase-binding transcription factor CarD;protein_id=WP_003419482.1;transl_table=11 NZ_KK316847.1 RefSeq gene 76226 76774 . + . ID=gene-AL60_RS09905;Name=AL60_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09905;old_locus_tag=AL60_00862 NZ_KK316847.1 Protein Homology CDS 76226 76774 . + 0 ID=cds-WP_003900715.1;Parent=gene-AL60_RS09905;Dbxref=GenBank:WP_003900715.1;Name=WP_003900715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218101.1;locus_tag=AL60_RS09905;product=copper chaperone PCu(A)C domain-containing protein;protein_id=WP_003900715.1;transl_table=11 NZ_KK316847.1 RefSeq gene 76840 78282 . + . ID=gene-AL60_RS09910;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=AL60_RS09910;old_locus_tag=AL60_00863 NZ_KK316847.1 Protein Homology CDS 76840 78282 . + 0 ID=cds-WP_003419487.1;Parent=gene-AL60_RS09910;Dbxref=GenBank:WP_003419487.1;Name=WP_003419487.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218102.1;locus_tag=AL60_RS09910;product=DNA repair protein RadA;protein_id=WP_003419487.1;transl_table=11 NZ_KK316847.1 RefSeq gene 78287 79363 . + . ID=gene-AL60_RS09915;Name=disA;gbkey=Gene;gene=disA;gene_biotype=protein_coding;locus_tag=AL60_RS09915;old_locus_tag=AL60_00864 NZ_KK316847.1 Protein Homology CDS 78287 79363 . + 0 ID=cds-WP_003900111.1;Parent=gene-AL60_RS09915;Dbxref=GenBank:WP_003900111.1;Name=WP_003900111.1;gbkey=CDS;gene=disA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218103.1;locus_tag=AL60_RS09915;product=DNA integrity scanning diadenylate cyclase DisA;protein_id=WP_003900111.1;transl_table=11 NZ_KK316847.1 RefSeq gene 79364 80158 . - . ID=gene-AL60_RS09920;Name=AL60_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09920;old_locus_tag=AL60_00865 NZ_KK316847.1 Protein Homology CDS 79364 80158 . - 0 ID=cds-WP_003419490.1;Parent=gene-AL60_RS09920;Dbxref=GenBank:WP_003419490.1;Name=WP_003419490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218104.1;locus_tag=AL60_RS09920;product=hypothetical protein;protein_id=WP_003419490.1;transl_table=11 NZ_KK316847.1 RefSeq gene 80267 80890 . - . ID=gene-AL60_RS09925;Name=canB;gbkey=Gene;gene=canB;gene_biotype=protein_coding;locus_tag=AL60_RS09925;old_locus_tag=AL60_00866 NZ_KK316847.1 Protein Homology CDS 80267 80890 . - 0 ID=cds-WP_003419492.1;Parent=gene-AL60_RS09925;Dbxref=GenBank:WP_003419492.1;Name=WP_003419492.1;gbkey=CDS;gene=canB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218105.1;locus_tag=AL60_RS09925;product=beta-carbonic anhydrase CanB;protein_id=WP_003419492.1;transl_table=11 NZ_KK316847.1 RefSeq gene 80889 81803 . + . ID=gene-AL60_RS09930;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=AL60_RS09930;old_locus_tag=AL60_00867 NZ_KK316847.1 Protein Homology CDS 80889 81803 . + 0 ID=cds-WP_003419495.1;Parent=gene-AL60_RS09930;Dbxref=GenBank:WP_003419495.1;Name=WP_003419495.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218106.1;locus_tag=AL60_RS09930;product=HhH-GPD family protein;protein_id=WP_003419495.1;transl_table=11 NZ_KK316847.1 RefSeq gene 81800 83554 . - . ID=gene-AL60_RS09935;Name=AL60_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09935;old_locus_tag=AL60_00868 NZ_KK316847.1 Protein Homology CDS 81800 83554 . - 0 ID=cds-WP_010886177.1;Parent=gene-AL60_RS09935;Dbxref=GenBank:WP_010886177.1;Name=WP_010886177.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177993.1;locus_tag=AL60_RS09935;product=PE family protein;protein_id=WP_010886177.1;transl_table=11 NZ_KK316847.1 RefSeq gene 83665 84438 . - . ID=gene-AL60_RS09940;Name=AL60_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09940;old_locus_tag=AL60_00869 NZ_KK316847.1 Protein Homology CDS 83665 84438 . - 0 ID=cds-WP_012054371.1;Parent=gene-AL60_RS09940;Dbxref=GenBank:WP_012054371.1;Name=WP_012054371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218108.1;locus_tag=AL60_RS09940;product=alpha/beta fold hydrolase;protein_id=WP_012054371.1;transl_table=11 NZ_KK316847.1 RefSeq gene 84453 84770 . + . ID=gene-AL60_RS09945;Name=mhuD;gbkey=Gene;gene=mhuD;gene_biotype=protein_coding;locus_tag=AL60_RS09945;old_locus_tag=AL60_00870 NZ_KK316847.1 Protein Homology CDS 84453 84770 . + 0 ID=cds-WP_003419501.1;Parent=gene-AL60_RS09945;Dbxref=GenBank:WP_003419501.1;Name=WP_003419501.1;gbkey=CDS;gene=mhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218109.1;locus_tag=AL60_RS09945;product=mycobilin-forming heme oxygenase MhuD;protein_id=WP_003419501.1;transl_table=11 NZ_KK316847.1 RefSeq gene 84748 86106 . + . ID=gene-AL60_RS09950;Name=lpqF;gbkey=Gene;gene=lpqF;gene_biotype=protein_coding;locus_tag=AL60_RS09950;old_locus_tag=AL60_00871 NZ_KK316847.1 Protein Homology CDS 84748 86106 . + 0 ID=cds-WP_003900716.1;Parent=gene-AL60_RS09950;Dbxref=GenBank:WP_003900716.1;Name=WP_003900716.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;gene=lpqF;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218110.1;locus_tag=AL60_RS09950;product=serine hydrolase;protein_id=WP_003900716.1;transl_table=11 NZ_KK316847.1 RefSeq gene 86253 87080 . + . ID=gene-AL60_RS09955;Name=AL60_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09955;old_locus_tag=AL60_00872 NZ_KK316847.1 Protein Homology CDS 86253 87080 . + 0 ID=cds-WP_003419504.1;Parent=gene-AL60_RS09955;Dbxref=GenBank:WP_003419504.1;Name=WP_003419504.1;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218111.1;locus_tag=AL60_RS09955;product=peptidoglycan recognition protein family protein;protein_id=WP_003419504.1;transl_table=11 NZ_KK316847.1 RefSeq gene 87127 88446 . - . ID=gene-AL60_RS09960;Name=AL60_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09960;old_locus_tag=AL60_00873 NZ_KK316847.1 Protein Homology CDS 87127 88446 . - 0 ID=cds-WP_003911027.1;Parent=gene-AL60_RS09960;Dbxref=GenBank:WP_003911027.1;Name=WP_003911027.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177994.1;locus_tag=AL60_RS09960;product=PE family protein;protein_id=WP_003911027.1;transl_table=11 NZ_KK316847.1 RefSeq gene 88554 91100 . - . ID=gene-AL60_RS09965;Name=clpC1;gbkey=Gene;gene=clpC1;gene_biotype=protein_coding;locus_tag=AL60_RS09965;old_locus_tag=AL60_00874 NZ_KK316847.1 Protein Homology CDS 88554 91100 . - 0 ID=cds-WP_003419511.1;Parent=gene-AL60_RS09965;Dbxref=GenBank:WP_003419511.1;Name=WP_003419511.1;gbkey=CDS;gene=clpC1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177995.1;locus_tag=AL60_RS09965;product=ATP-dependent protease ATP-binding subunit ClpC;protein_id=WP_003419511.1;transl_table=11 NZ_KK316847.1 RefSeq gene 91377 91715 . - . ID=gene-AL60_RS09970;Name=lsr2;gbkey=Gene;gene=lsr2;gene_biotype=protein_coding;locus_tag=AL60_RS09970;old_locus_tag=AL60_00875 NZ_KK316847.1 Protein Homology CDS 91377 91715 . - 0 ID=cds-WP_003419513.1;Parent=gene-AL60_RS09970;Dbxref=GenBank:WP_003419513.1;Name=WP_003419513.1;gbkey=CDS;gene=lsr2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218114.1;locus_tag=AL60_RS09970;product=histone-like nucleoid-structuring protein Lsr2;protein_id=WP_003419513.1;transl_table=11 NZ_KK316847.1 RefSeq gene 91819 93336 . - . ID=gene-AL60_RS09975;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AL60_RS09975;old_locus_tag=AL60_00876 NZ_KK316847.1 Protein Homology CDS 91819 93336 . - 0 ID=cds-WP_003419514.1;Parent=gene-AL60_RS09975;Dbxref=GenBank:WP_003419514.1;Name=WP_003419514.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218115.1;locus_tag=AL60_RS09975;product=lysine--tRNA ligase;protein_id=WP_003419514.1;transl_table=11 NZ_KK316847.1 RefSeq gene 93437 94255 . - . ID=gene-AL60_RS09985;Name=AL60_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS09985;old_locus_tag=AL60_00878 NZ_KK316847.1 Protein Homology CDS 93437 94255 . - 0 ID=cds-WP_003419517.1;Parent=gene-AL60_RS09985;Dbxref=GenBank:WP_003419517.1;Name=WP_003419517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218117.1;locus_tag=AL60_RS09985;product=type III pantothenate kinase;protein_id=WP_003419517.1;transl_table=11 NZ_KK316847.1 RefSeq gene 94258 94677 . - . ID=gene-AL60_RS09990;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=AL60_RS09990;old_locus_tag=AL60_00879 NZ_KK316847.1 Protein Homology CDS 94258 94677 . - 0 ID=cds-WP_003419523.1;Parent=gene-AL60_RS09990;Dbxref=GenBank:WP_003419523.1;Name=WP_003419523.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218118.1;locus_tag=AL60_RS09990;product=aspartate 1-decarboxylase;protein_id=WP_003419523.1;transl_table=11 NZ_KK316847.1 RefSeq gene 94677 95606 . - . ID=gene-AL60_RS09995;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AL60_RS09995;old_locus_tag=AL60_00880 NZ_KK316847.1 Protein Homology CDS 94677 95606 . - 0 ID=cds-WP_003419526.1;Parent=gene-AL60_RS09995;Dbxref=GenBank:WP_003419526.1;Name=WP_003419526.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218119.1;locus_tag=AL60_RS09995;product=pantoate--beta-alanine ligase;protein_id=WP_003419526.1;transl_table=11 NZ_KK316847.1 RefSeq gene 95603 96514 . - . ID=gene-AL60_RS10000;Name=AL60_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10000;old_locus_tag=AL60_00881 NZ_KK316847.1 Protein Homology CDS 95603 96514 . - 0 ID=cds-WP_003419533.1;Parent=gene-AL60_RS10000;Dbxref=GenBank:WP_003419533.1;Name=WP_003419533.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218120.1;locus_tag=AL60_RS10000;product=Rossmann-like and DUF2520 domain-containing protein;protein_id=WP_003419533.1;transl_table=11 NZ_KK316847.1 RefSeq gene 96699 97892 . - . ID=gene-AL60_RS10005;Name=AL60_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10005;old_locus_tag=AL60_00882 NZ_KK316847.1 Protein Homology CDS 96699 97892 . - 0 ID=cds-WP_003899595.1;Parent=gene-AL60_RS10005;Dbxref=GenBank:WP_003899595.1;Name=WP_003899595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218121.2;locus_tag=AL60_RS10005;product=DUF6779 domain-containing protein;protein_id=WP_003899595.1;transl_table=11 NZ_KK316847.1 RefSeq gene 98101 98577 . - . ID=gene-AL60_RS10010;Name=AL60_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10010;old_locus_tag=AL60_00883 NZ_KK316847.1 Protein Homology CDS 98101 98577 . - 0 ID=cds-WP_003419535.1;Parent=gene-AL60_RS10010;Dbxref=GenBank:WP_003419535.1;Name=WP_003419535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218122.1;locus_tag=AL60_RS10010;product=DUF3180 domain-containing protein;protein_id=WP_003419535.1;transl_table=11 NZ_KK316847.1 RefSeq gene 98577 99143 . - . ID=gene-AL60_RS10015;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=AL60_RS10015;old_locus_tag=AL60_00884 NZ_KK316847.1 Protein Homology CDS 98577 99143 . - 0 ID=cds-WP_003419536.1;Parent=gene-AL60_RS10015;Dbxref=GenBank:WP_003419536.1;Name=WP_003419536.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218123.1;locus_tag=AL60_RS10015;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_003419536.1;transl_table=11 NZ_KK316847.1 RefSeq gene 99140 99541 . - . ID=gene-AL60_RS10020;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AL60_RS10020;old_locus_tag=AL60_00885 NZ_KK316847.1 Protein Homology CDS 99140 99541 . - 0 ID=cds-WP_003419537.1;Parent=gene-AL60_RS10020;Dbxref=GenBank:WP_003419537.1;Name=WP_003419537.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177996.1;locus_tag=AL60_RS10020;product=dihydroneopterin aldolase;protein_id=WP_003419537.1;transl_table=11 NZ_KK316847.1 RefSeq gene 99534 100376 . - . ID=gene-AL60_RS10025;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AL60_RS10025;old_locus_tag=AL60_00886 NZ_KK316847.1 Protein Homology CDS 99534 100376 . - 0 ID=cds-WP_003899596.1;Parent=gene-AL60_RS10025;Dbxref=GenBank:WP_003899596.1;Name=WP_003899596.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177997.1;locus_tag=AL60_RS10025;product=dihydropteroate synthase;protein_id=WP_003899596.1;transl_table=11 NZ_KK316847.1 RefSeq gene 100373 100981 . - . ID=gene-AL60_RS10030;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AL60_RS10030;old_locus_tag=AL60_00887 NZ_KK316847.1 Protein Homology CDS 100373 100981 . - 0 ID=cds-WP_003899597.1;Parent=gene-AL60_RS10030;Dbxref=GenBank:WP_003899597.1;Name=WP_003899597.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218126.1;locus_tag=AL60_RS10030;product=GTP cyclohydrolase I FolE;protein_id=WP_003899597.1;transl_table=11 NZ_KK316847.1 RefSeq gene 100997 103279 . - . ID=gene-AL60_RS10035;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=AL60_RS10035;old_locus_tag=AL60_00888 NZ_KK316847.1 Protein Homology CDS 100997 103279 . - 0 ID=cds-WP_003419543.1;Parent=gene-AL60_RS10035;Dbxref=GenBank:WP_003419543.1;Name=WP_003419543.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218127.1;locus_tag=AL60_RS10035;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_003419543.1;transl_table=11 NZ_KK316847.1 RefSeq gene 104277 104438 . - . ID=gene-AL60_RS10050;Name=AL60_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10050;old_locus_tag=AL60_00891 NZ_KK316847.1 Protein Homology CDS 104277 104438 . - 0 ID=cds-WP_003902532.1;Parent=gene-AL60_RS10050;Dbxref=GenBank:WP_003902532.1;Name=WP_003902532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218130.1;locus_tag=AL60_RS10050;product=hypothetical protein;protein_id=WP_003902532.1;transl_table=11 NZ_KK316847.1 RefSeq gene 104538 105092 . - . ID=gene-AL60_RS10055;Name=espD;gbkey=Gene;gene=espD;gene_biotype=protein_coding;locus_tag=AL60_RS10055;old_locus_tag=AL60_00892 NZ_KK316847.1 Protein Homology CDS 104538 105092 . - 0 ID=cds-WP_003419545.1;Parent=gene-AL60_RS10055;Dbxref=GenBank:WP_003419545.1;Name=WP_003419545.1;gbkey=CDS;gene=espD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218131.1;locus_tag=AL60_RS10055;product=type VII secretion system ESX-1 target EspD;protein_id=WP_003419545.1;transl_table=11 NZ_KK316847.1 RefSeq gene 105208 105519 . - . ID=gene-AL60_RS10060;Name=espC;gbkey=Gene;gene=espC;gene_biotype=protein_coding;locus_tag=AL60_RS10060;old_locus_tag=AL60_00893 NZ_KK316847.1 Protein Homology CDS 105208 105519 . - 0 ID=cds-WP_003899599.1;Parent=gene-AL60_RS10060;Dbxref=GenBank:WP_003899599.1;Name=WP_003899599.1;gbkey=CDS;gene=espC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218132.1;locus_tag=AL60_RS10060;product=type VII secretion system ESX-1 filament-forming target EspC;protein_id=WP_003899599.1;transl_table=11 NZ_KK316847.1 RefSeq gene 105593 106771 . - . ID=gene-AL60_RS10065;Name=espA;gbkey=Gene;gene=espA;gene_biotype=protein_coding;locus_tag=AL60_RS10065;old_locus_tag=AL60_00894 NZ_KK316847.1 Protein Homology CDS 105593 106771 . - 0 ID=cds-WP_003419551.1;Parent=gene-AL60_RS10065;Dbxref=GenBank:WP_003419551.1;Name=WP_003419551.1;gbkey=CDS;gene=espA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218133.1;locus_tag=AL60_RS10065;product=type VII secretion system ESX-1 target EspA;protein_id=WP_003419551.1;transl_table=11 NZ_KK316847.1 RefSeq gene 108129 109097 . + . ID=gene-AL60_RS10070;Name=ephA;gbkey=Gene;gene=ephA;gene_biotype=protein_coding;locus_tag=AL60_RS10070;old_locus_tag=AL60_00895 NZ_KK316847.1 Protein Homology CDS 108129 109097 . + 0 ID=cds-WP_003899600.1;Parent=gene-AL60_RS10070;Dbxref=GenBank:WP_003899600.1;Name=WP_003899600.1;gbkey=CDS;gene=ephA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218134.1;locus_tag=AL60_RS10070;product=epoxide hydrolase EphA;protein_id=WP_003899600.1;transl_table=11 NZ_KK316847.1 RefSeq gene 109094 110281 . + . ID=gene-AL60_RS10075;Name=AL60_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10075;old_locus_tag=AL60_00896 NZ_KK316847.1 Protein Homology CDS 109094 110281 . + 0 ID=cds-WP_003899601.1;Parent=gene-AL60_RS10075;Dbxref=GenBank:WP_003899601.1;Name=WP_003899601.1;Ontology_term=GO:0010181,GO:0016491,GO:0070967;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218135.1;locus_tag=AL60_RS10075;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_003899601.1;transl_table=11 NZ_KK316847.1 RefSeq gene 110380 110664 . - . ID=gene-AL60_RS10080;Name=esxV;gbkey=Gene;gene=esxV;gene_biotype=protein_coding;locus_tag=AL60_RS10080;old_locus_tag=AL60_00897 NZ_KK316847.1 Protein Homology CDS 110380 110664 . - 0 ID=cds-WP_003898699.1-2;Parent=gene-AL60_RS10080;Dbxref=GenBank:WP_003898699.1;Name=WP_003898699.1;gbkey=CDS;gene=esxV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215553.1;locus_tag=AL60_RS10080;product=type VII secretion system protein EsxV;protein_id=WP_003898699.1;transl_table=11 NZ_KK316847.1 RefSeq gene 110691 110987 . - . ID=gene-AL60_RS10085;Name=esxW;gbkey=Gene;gene=esxW;gene_biotype=protein_coding;locus_tag=AL60_RS10085;old_locus_tag=AL60_00898 NZ_KK316847.1 Protein Homology CDS 110691 110987 . - 0 ID=cds-WP_003899603.1;Parent=gene-AL60_RS10085;Dbxref=GenBank:WP_003899603.1;Name=WP_003899603.1;gbkey=CDS;gene=esxW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218137.1;locus_tag=AL60_RS10085;product=type VII secretion system protein EsxW;protein_id=WP_003899603.1;transl_table=11 NZ_KK316847.1 RefSeq gene 111044 112285 . - . ID=gene-AL60_RS10090;Name=AL60_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10090;old_locus_tag=AL60_00899 NZ_KK316847.1 Protein Homology CDS 111044 112285 . - 0 ID=cds-WP_003900723.1;Parent=gene-AL60_RS10090;Dbxref=GenBank:WP_003900723.1;Name=WP_003900723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177998.1;locus_tag=AL60_RS10090;product=PPE family protein;protein_id=WP_003900723.1;transl_table=11 NZ_KK316847.1 RefSeq gene 112295 112594 . - . ID=gene-AL60_RS10095;Name=AL60_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10095;old_locus_tag=AL60_00900 NZ_KK316847.1 Protein Homology CDS 112295 112594 . - 0 ID=cds-WP_003899605.1;Parent=gene-AL60_RS10095;Dbxref=GenBank:WP_003899605.1;Name=WP_003899605.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177999.1;locus_tag=AL60_RS10095;product=PE family protein;protein_id=WP_003899605.1;transl_table=11 NZ_KK316847.1 RefSeq gene 112923 113645 . + . ID=gene-AL60_RS10100;Name=lpqG;gbkey=Gene;gene=lpqG;gene_biotype=protein_coding;locus_tag=AL60_RS10100;old_locus_tag=AL60_00901 NZ_KK316847.1 Protein Homology CDS 112923 113645 . + 0 ID=cds-WP_003899606.1;Parent=gene-AL60_RS10100;Dbxref=GenBank:WP_003899606.1;Name=WP_003899606.1;gbkey=CDS;gene=lpqG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218140.1;locus_tag=AL60_RS10100;product=SIMPL domain-containing protein;protein_id=WP_003899606.1;transl_table=11 NZ_KK316847.1 RefSeq gene 113650 114300 . - . ID=gene-AL60_RS10105;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AL60_RS10105;old_locus_tag=AL60_00902 NZ_KK316847.1 Protein Homology CDS 113650 114300 . - 0 ID=cds-WP_003419558.1;Parent=gene-AL60_RS10105;Dbxref=GenBank:WP_003419558.1;Name=WP_003419558.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218141.1;locus_tag=AL60_RS10105;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_003419558.1;transl_table=11 NZ_KK316847.1 RefSeq gene 114297 115268 . - . ID=gene-AL60_RS10110;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AL60_RS10110;old_locus_tag=AL60_00903 NZ_KK316847.1 Protein Homology CDS 114297 115268 . - 0 ID=cds-WP_003899608.1;Parent=gene-AL60_RS10110;Dbxref=GenBank:WP_003899608.1;Name=WP_003899608.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218142.1;locus_tag=AL60_RS10110;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_003899608.1;transl_table=11 NZ_KK316847.1 RefSeq gene 115247 116299 . - . ID=gene-AL60_RS10115;Name=AL60_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10115;old_locus_tag=AL60_00904 NZ_KK316847.1 Protein Homology CDS 115247 116299 . - 0 ID=cds-WP_003419571.1;Parent=gene-AL60_RS10115;Dbxref=GenBank:WP_003419571.1;Name=WP_003419571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218143.1;locus_tag=AL60_RS10115;product=zinc-dependent metalloprotease;protein_id=WP_003419571.1;transl_table=11 NZ_KK316847.1 RefSeq gene 116296 117681 . - . ID=gene-AL60_RS10120;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AL60_RS10120;old_locus_tag=AL60_00905 NZ_KK316847.1 Protein Homology CDS 116296 117681 . - 0 ID=cds-WP_003899610.1;Parent=gene-AL60_RS10120;Dbxref=GenBank:WP_003899610.1;Name=WP_003899610.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218144.1;locus_tag=AL60_RS10120;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase;protein_id=WP_003899610.1;transl_table=11 NZ_KK316847.1 RefSeq gene 117819 118307 . + . ID=gene-AL60_RS10125;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AL60_RS10125;old_locus_tag=AL60_00906 NZ_KK316847.1 Protein Homology CDS 117819 118307 . + 0 ID=cds-WP_003419577.1;Parent=gene-AL60_RS10125;Dbxref=GenBank:WP_003419577.1;Name=WP_003419577.1;gbkey=CDS;gene=ppa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218145.1;locus_tag=AL60_RS10125;product=inorganic diphosphatase;protein_id=WP_003419577.1;transl_table=11 NZ_KK316847.1 RefSeq gene 118353 119450 . - . ID=gene-AL60_RS10130;Name=AL60_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10130;old_locus_tag=AL60_00907 NZ_KK316847.1 Protein Homology CDS 118353 119450 . - 0 ID=cds-WP_003419580.1;Parent=gene-AL60_RS10130;Dbxref=GenBank:WP_003419580.1;Name=WP_003419580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218146.1;locus_tag=AL60_RS10130;product=DUF475 domain-containing protein;protein_id=WP_003419580.1;transl_table=11 NZ_KK316847.1 RefSeq gene 119571 120866 . + . ID=gene-AL60_RS10135;Name=AL60_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10135;old_locus_tag=AL60_00908 NZ_KK316847.1 Protein Homology CDS 119571 120866 . + 0 ID=cds-WP_003419582.1;Parent=gene-AL60_RS10135;Dbxref=GenBank:WP_003419582.1;Name=WP_003419582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218147.1;locus_tag=AL60_RS10135;product=hypothetical protein;protein_id=WP_003419582.1;transl_table=11 NZ_KK316847.1 RefSeq gene 120910 121635 . + . ID=gene-AL60_RS10140;Name=AL60_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10140;old_locus_tag=AL60_00909 NZ_KK316847.1 Protein Homology CDS 120910 121635 . + 0 ID=cds-WP_003419585.1;Parent=gene-AL60_RS10140;Dbxref=GenBank:WP_003419585.1;Name=WP_003419585.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218148.1;locus_tag=AL60_RS10140;product=glycosyltransferase family 2 protein;protein_id=WP_003419585.1;transl_table=11 NZ_KK316847.1 RefSeq gene 121632 121976 . + . ID=gene-AL60_RS10145;Name=AL60_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10145;old_locus_tag=AL60_00910 NZ_KK316847.1 Protein Homology CDS 121632 121976 . + 0 ID=cds-WP_003419590.1;Parent=gene-AL60_RS10145;Dbxref=GenBank:WP_003419590.1;Name=WP_003419590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218149.1;locus_tag=AL60_RS10145;product=DUF2304 domain-containing protein;protein_id=WP_003419590.1;transl_table=11 NZ_KK316847.1 RefSeq gene 122187 123062 . + . ID=gene-AL60_RS10150;Name=AL60_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10150;old_locus_tag=AL60_00911 NZ_KK316847.1 Protein Homology CDS 122187 123062 . + 0 ID=cds-WP_003419601.1;Parent=gene-AL60_RS10150;Dbxref=GenBank:WP_003419601.1;Name=WP_003419601.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218150.1;locus_tag=AL60_RS10150;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_003419601.1;transl_table=11 NZ_KK316847.1 RefSeq gene 123063 124007 . - . ID=gene-AL60_RS10155;Name=galE1;gbkey=Gene;gene=galE1;gene_biotype=protein_coding;locus_tag=AL60_RS10155;old_locus_tag=AL60_00912 NZ_KK316847.1 Protein Homology CDS 123063 124007 . - 0 ID=cds-WP_003419610.1;Parent=gene-AL60_RS10155;Dbxref=GenBank:WP_003419610.1;Name=WP_003419610.1;gbkey=CDS;gene=galE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215015.2;locus_tag=AL60_RS10155;product=UDP-glucose 4-epimerase;protein_id=WP_003419610.1;transl_table=11 NZ_KK316847.1 RefSeq gene 124030 125805 . + . ID=gene-AL60_RS10160;Name=AL60_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10160;old_locus_tag=AL60_00913 NZ_KK316847.1 Protein Homology CDS 124030 125805 . + 0 ID=cds-WP_003419613.1;Parent=gene-AL60_RS10160;Dbxref=GenBank:WP_003419613.1;Name=WP_003419613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218152.1;locus_tag=AL60_RS10160;product=hypothetical protein;protein_id=WP_003419613.1;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 126148 127380 . + . ID=gene-AL60_RS25635;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=AL60_RS25635;pseudo=true NZ_KK316847.1 Protein Homology CDS 126148 127380 . + 0 ID=cds-AL60_RS25635;Parent=gene-AL60_RS25635;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414864.1;locus_tag=AL60_RS25635;product=IS21 family transposase;pseudo=true;transl_table=11 NZ_KK316847.1 RefSeq gene 127380 128126 . + . ID=gene-AL60_RS10175;Name=AL60_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10175;old_locus_tag=AL60_00916 NZ_KK316847.1 Protein Homology CDS 127380 128126 . + 0 ID=cds-WP_003899614.1;Parent=gene-AL60_RS10175;Dbxref=GenBank:WP_003899614.1;Name=WP_003899614.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218155.1;locus_tag=AL60_RS10175;product=ATP-binding protein;protein_id=WP_003899614.1;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 128502 128597 . + . ID=gene-AL60_RS28085;Name=AL60_RS28085;end_range=128597,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28085;partial=true;pseudo=true;start_range=.,128502 NZ_KK316847.1 Protein Homology CDS 128502 128597 . + 0 ID=cds-AL60_RS28085;Parent=gene-AL60_RS28085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=128597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=AL60_RS28085;partial=true;product=hypothetical protein;pseudo=true;start_range=.,128502;transl_table=11 NZ_KK316847.1 RefSeq gene 128916 130145 . - . ID=gene-AL60_RS10185;Name=AL60_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10185;old_locus_tag=AL60_00918 NZ_KK316847.1 Protein Homology CDS 128916 130145 . - 0 ID=cds-WP_003899615.1;Parent=gene-AL60_RS10185;Dbxref=GenBank:WP_003899615.1;Name=WP_003899615.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218157.1;locus_tag=AL60_RS10185;product=IS256-like element IS1553 family transposase;protein_id=WP_003899615.1;transl_table=11 NZ_KK316847.1 RefSeq gene 130321 130956 . - . ID=gene-AL60_RS10190;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=AL60_RS10190;old_locus_tag=AL60_00919 NZ_KK316847.1 Protein Homology CDS 130321 130956 . - 0 ID=cds-WP_003899616.1;Parent=gene-AL60_RS10190;Dbxref=GenBank:WP_003899616.1;Name=WP_003899616.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=fic;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218158.1;locus_tag=AL60_RS10190;product=Fic/DOC family protein;protein_id=WP_003899616.1;transl_table=11 NZ_KK316847.1 RefSeq gene 130967 131161 . - . ID=gene-AL60_RS10195;Name=AL60_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10195;old_locus_tag=AL60_00920 NZ_KK316847.1 Protein Homology CDS 130967 131161 . - 0 ID=cds-WP_003419627.1;Parent=gene-AL60_RS10195;Dbxref=GenBank:WP_003419627.1;Name=WP_003419627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218159.1;locus_tag=AL60_RS10195;product=antitoxin VbhA family protein;protein_id=WP_003419627.1;transl_table=11 NZ_KK316847.1 RefSeq gene 131326 131460 . + . ID=gene-AL60_RS27820;Name=AL60_RS27820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27820 NZ_KK316847.1 Protein Homology CDS 131326 131460 . + 0 ID=cds-WP_023641736.1;Parent=gene-AL60_RS27820;Dbxref=GenBank:WP_023641736.1;Name=WP_023641736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419630.1;locus_tag=AL60_RS27820;product=hypothetical protein;protein_id=WP_023641736.1;transl_table=11 NZ_KK316847.1 RefSeq gene 131556 131747 . + . ID=gene-AL60_RS10200;Name=AL60_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10200;old_locus_tag=AL60_00921 NZ_KK316847.1 Protein Homology CDS 131556 131747 . + 0 ID=cds-WP_003419633.1;Parent=gene-AL60_RS10200;Dbxref=GenBank:WP_003419633.1;Name=WP_003419633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218160.1;locus_tag=AL60_RS10200;product=hypothetical protein;protein_id=WP_003419633.1;transl_table=11 NZ_KK316847.1 RefSeq gene 131758 131833 . - . ID=gene-AL60_RS10205;Name=AL60_RS10205;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS10205;old_locus_tag=AL60_00922 NZ_KK316847.1 tRNAscan-SE tRNA 131758 131833 . - . ID=rna-AL60_RS10205;Parent=gene-AL60_RS10205;anticodon=(pos:complement(131798..131800));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS10205;product=tRNA-Thr NZ_KK316847.1 tRNAscan-SE exon 131758 131833 . - . ID=exon-AL60_RS10205-1;Parent=rna-AL60_RS10205;anticodon=(pos:complement(131798..131800));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS10205;product=tRNA-Thr NZ_KK316847.1 RefSeq gene 131912 133117 . - . ID=gene-AL60_RS10210;Name=AL60_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10210;old_locus_tag=AL60_00923 NZ_KK316847.1 Protein Homology CDS 131912 133117 . - 0 ID=cds-WP_003419637.1;Parent=gene-AL60_RS10210;Dbxref=GenBank:WP_003419637.1;Name=WP_003419637.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408,GO:0009360;gbkey=CDS;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218161.1;locus_tag=AL60_RS10210;product=DNA polymerase III subunit delta';protein_id=WP_003419637.1;transl_table=11 NZ_KK316847.1 RefSeq gene 133203 134852 . + . ID=gene-AL60_RS10215;Name=AL60_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10215;old_locus_tag=AL60_00924 NZ_KK316847.1 Protein Homology CDS 133203 134852 . + 0 ID=cds-WP_003419638.1;Parent=gene-AL60_RS10215;Dbxref=GenBank:WP_003419638.1;Name=WP_003419638.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218162.1;locus_tag=AL60_RS10215;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003419638.1;transl_table=11 NZ_KK316847.1 RefSeq gene 134849 137653 . - . ID=gene-AL60_RS10220;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AL60_RS10220;old_locus_tag=AL60_00925 NZ_KK316847.1 Protein Homology CDS 134849 137653 . - 0 ID=cds-WP_012054374.1;Parent=gene-AL60_RS10220;Dbxref=GenBank:WP_012054374.1;Name=WP_012054374.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218163.1;locus_tag=AL60_RS10220;product=type I DNA topoisomerase;protein_id=WP_012054374.1;transl_table=11 NZ_KK316847.1 RefSeq gene 138006 138584 . - . ID=gene-AL60_RS10225;Name=AL60_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10225;old_locus_tag=AL60_00926 NZ_KK316847.1 Protein Homology CDS 138006 138584 . - 0 ID=cds-WP_003419642.1;Parent=gene-AL60_RS10225;Dbxref=GenBank:WP_003419642.1;Name=WP_003419642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218164.1;locus_tag=AL60_RS10225;product=hypothetical protein;protein_id=WP_003419642.1;transl_table=11 NZ_KK316847.1 RefSeq gene 138724 138927 . - . ID=gene-AL60_RS10230;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=AL60_RS10230;old_locus_tag=AL60_00927 NZ_KK316847.1 Protein Homology CDS 138724 138927 . - 0 ID=cds-WP_003419650.1;Parent=gene-AL60_RS10230;Dbxref=GenBank:WP_003419650.1;Name=WP_003419650.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218165.1;locus_tag=AL60_RS10230;product=cold shock protein CspA;protein_id=WP_003419650.1;transl_table=11 NZ_KK316847.1 RefSeq gene 139177 141492 . + . ID=gene-AL60_RS10235;Name=AL60_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10235;old_locus_tag=AL60_00928 NZ_KK316847.1 Protein Homology CDS 139177 141492 . + 0 ID=cds-WP_003899618.1;Parent=gene-AL60_RS10235;Dbxref=GenBank:WP_003899618.1;Name=WP_003899618.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218166.1;locus_tag=AL60_RS10235;product=DEAD/DEAH box helicase;protein_id=WP_003899618.1;transl_table=11 NZ_KK316847.1 RefSeq gene 141629 141913 . + . ID=gene-AL60_RS10240;Name=AL60_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10240;old_locus_tag=AL60_00929 NZ_KK316847.1 Protein Homology CDS 141629 141913 . + 0 ID=cds-WP_003419654.1;Parent=gene-AL60_RS10240;Dbxref=GenBank:WP_003419654.1;Name=WP_003419654.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178000.1;locus_tag=AL60_RS10240;product=PE family protein;protein_id=WP_003419654.1;transl_table=11 NZ_KK316847.1 RefSeq gene 142237 143274 . + . ID=gene-AL60_RS10245;Name=AL60_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10245;old_locus_tag=AL60_00930 NZ_KK316847.1 Protein Homology CDS 142237 143274 . + 0 ID=cds-WP_003419657.1;Parent=gene-AL60_RS10245;Dbxref=GenBank:WP_003419657.1;Name=WP_003419657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218168.1;locus_tag=AL60_RS10245;product=PAS domain-containing protein;protein_id=WP_003419657.1;transl_table=11 NZ_KK316847.1 RefSeq gene 143417 143572 . - . ID=gene-AL60_RS27065;Name=AL60_RS27065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27065 NZ_KK316847.1 Protein Homology CDS 143417 143572 . - 0 ID=cds-WP_003917826.1;Parent=gene-AL60_RS27065;Dbxref=GenBank:WP_003917826.1;Name=WP_003917826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291617.1;locus_tag=AL60_RS27065;product=hypothetical protein;protein_id=WP_003917826.1;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 144028 144341 . + . ID=gene-AL60_RS0104400;Name=AL60_RS0104400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0104400;old_locus_tag=AL60_00931;pseudo=true NZ_KK316847.1 Protein Homology CDS 144028 144341 . + 0 ID=cds-AL60_RS0104400;Parent=gene-AL60_RS0104400;Note=frameshifted;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL60_RS0104400;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316847.1 RefSeq gene 144335 144922 . + . ID=gene-AL60_RS10250;Name=AL60_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10250;old_locus_tag=AL60_00932 NZ_KK316847.1 Protein Homology CDS 144335 144922 . + 0 ID=cds-WP_003907101.1;Parent=gene-AL60_RS10250;Dbxref=GenBank:WP_003907101.1;Name=WP_003907101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178002.1;locus_tag=AL60_RS10250;product=PGRS repeat-containing protein;protein_id=WP_003907101.1;transl_table=11 NZ_KK316847.1 RefSeq gene 145055 145363 . - . ID=gene-AL60_RS10255;Name=AL60_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10255;old_locus_tag=AL60_00933 NZ_KK316847.1 Protein Homology CDS 145055 145363 . - 0 ID=cds-WP_012054375.1;Parent=gene-AL60_RS10255;Dbxref=GenBank:WP_012054375.1;Name=WP_012054375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003925186.1;locus_tag=AL60_RS10255;product=Rv3654c family TadE-like protein;protein_id=WP_012054375.1;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 145318 145694 . - . ID=gene-AL60_RS10260;Name=AL60_RS10260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS10260;old_locus_tag=AL60_00934;pseudo=true NZ_KK316847.1 Protein Homology CDS 145318 145694 . - 0 ID=cds-AL60_RS10260;Parent=gene-AL60_RS10260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218172.1;locus_tag=AL60_RS10260;product=apoptosis inhibitor;pseudo=true;transl_table=11 NZ_KK316847.1 RefSeq gene 145718 145924 . - . ID=gene-AL60_RS10265;Name=AL60_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10265;old_locus_tag=AL60_00935 NZ_KK316847.1 Protein Homology CDS 145718 145924 . - 0 ID=cds-WP_003419673.1;Parent=gene-AL60_RS10265;Dbxref=GenBank:WP_003419673.1;Name=WP_003419673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218173.1;locus_tag=AL60_RS10265;product=DUF4244 domain-containing protein;protein_id=WP_003419673.1;transl_table=11 NZ_KK316847.1 RefSeq gene 145934 146536 . - . ID=gene-AL60_RS10270;Name=AL60_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10270;old_locus_tag=AL60_00936 NZ_KK316847.1 Protein Homology CDS 145934 146536 . - 0 ID=cds-WP_003899622.1;Parent=gene-AL60_RS10270;Dbxref=GenBank:WP_003899622.1;Name=WP_003899622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015456535.1;locus_tag=AL60_RS10270;product=type II secretion system F family protein;protein_id=WP_003899622.1;transl_table=11 NZ_KK316847.1 RefSeq gene 146533 147333 . - . ID=gene-AL60_RS10275;Name=AL60_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10275;old_locus_tag=AL60_00937 NZ_KK316847.1 Protein Homology CDS 146533 147333 . - 0 ID=cds-WP_003419679.1;Parent=gene-AL60_RS10275;Dbxref=GenBank:WP_003419679.1;Name=WP_003419679.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218175.1;locus_tag=AL60_RS10275;product=type II secretion system F family protein;protein_id=WP_003419679.1;transl_table=11 NZ_KK316847.1 RefSeq gene 147330 148493 . - . ID=gene-AL60_RS10280;Name=AL60_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10280;old_locus_tag=AL60_00938 NZ_KK316847.1 Protein Homology CDS 147330 148493 . - 0 ID=cds-WP_003899624.1;Parent=gene-AL60_RS10280;Dbxref=GenBank:WP_003899624.1;Name=WP_003899624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899624.1;locus_tag=AL60_RS10280;product=TadA family conjugal transfer-associated ATPase;protein_id=WP_003899624.1;transl_table=11 NZ_KK316847.1 RefSeq gene 148490 149542 . - . ID=gene-AL60_RS10285;Name=ssd;gbkey=Gene;gene=ssd;gene_biotype=protein_coding;locus_tag=AL60_RS10285;old_locus_tag=AL60_00939 NZ_KK316847.1 Protein Homology CDS 148490 149542 . - 0 ID=cds-WP_003900732.1;Parent=gene-AL60_RS10285;Dbxref=GenBank:WP_003900732.1;Name=WP_003900732.1;gbkey=CDS;gene=ssd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218177.1;locus_tag=AL60_RS10285;product=septum site-determining protein Ssd;protein_id=WP_003900732.1;transl_table=11 NZ_KK316847.1 RefSeq gene 150041 150904 . + . ID=gene-AL60_RS10290;Name=AL60_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10290;old_locus_tag=AL60_00940 NZ_KK316847.1 Protein Homology CDS 150041 150904 . + 0 ID=cds-WP_003419689.1;Parent=gene-AL60_RS10290;Dbxref=GenBank:WP_003419689.1;Name=WP_003419689.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218178.1;locus_tag=AL60_RS10290;product=HAD-IB family hydrolase;protein_id=WP_003419689.1;transl_table=11 NZ_KK316847.1 RefSeq gene 151659 152429 . - . ID=gene-AL60_RS10295;Name=AL60_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10295;old_locus_tag=AL60_00941 NZ_KK316847.1 Protein Homology CDS 151659 152429 . - 0 ID=cds-WP_003899626.1;Parent=gene-AL60_RS10295;Dbxref=GenBank:WP_003899626.1;Name=WP_003899626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218179.1;locus_tag=AL60_RS10295;product=Fic family protein;protein_id=WP_003899626.1;transl_table=11 NZ_KK316847.1 RefSeq gene 152426 154072 . - . ID=gene-AL60_RS10300;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AL60_RS10300;old_locus_tag=AL60_00942 NZ_KK316847.1 Protein Homology CDS 152426 154072 . - 0 ID=cds-WP_003900733.1;Parent=gene-AL60_RS10300;Dbxref=GenBank:WP_003900733.1;Name=WP_003900733.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=dppD;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218180.1;locus_tag=AL60_RS10300;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_003900733.1;transl_table=11 NZ_KK316847.1 RefSeq gene 154069 154932 . - . ID=gene-AL60_RS10305;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=AL60_RS10305;old_locus_tag=AL60_00943 NZ_KK316847.1 Protein Homology CDS 154069 154932 . - 0 ID=cds-WP_003899628.1;Parent=gene-AL60_RS10305;Dbxref=GenBank:WP_003899628.1;Name=WP_003899628.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=dppC;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020785225.1;locus_tag=AL60_RS10305;product=ABC transporter permease;protein_id=WP_003899628.1;transl_table=11 NZ_KK316847.1 RefSeq gene 154925 155851 . - . ID=gene-AL60_RS10310;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=AL60_RS10310;old_locus_tag=AL60_00944 NZ_KK316847.1 Protein Homology CDS 154925 155851 . - 0 ID=cds-WP_003419701.1;Parent=gene-AL60_RS10310;Dbxref=GenBank:WP_003419701.1;Name=WP_003419701.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218182.1;locus_tag=AL60_RS10310;product=ABC transporter permease;protein_id=WP_003419701.1;transl_table=11 NZ_KK316847.1 RefSeq gene 155853 157478 . - . ID=gene-AL60_RS10315;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=AL60_RS10315;old_locus_tag=AL60_00945 NZ_KK316847.1 Protein Homology CDS 155853 157478 . - 0 ID=cds-WP_003899629.1;Parent=gene-AL60_RS10315;Dbxref=GenBank:WP_003899629.1;Name=WP_003899629.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=dppA;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218183.1;locus_tag=AL60_RS10315;product=peptide ABC transporter substrate-binding protein;protein_id=WP_003899629.1;transl_table=11 NZ_KK316847.1 RefSeq gene 158186 160141 . + . ID=gene-AL60_RS10320;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=AL60_RS10320;old_locus_tag=AL60_00947 NZ_KK316847.1 Protein Homology CDS 158186 160141 . + 0 ID=cds-WP_003899631.1;Parent=gene-AL60_RS10320;Dbxref=GenBank:WP_003899631.1;Name=WP_003899631.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218184.1;locus_tag=AL60_RS10320;product=acetate--CoA ligase;protein_id=WP_003899631.1;transl_table=11 NZ_KK316847.1 RefSeq gene 160177 160875 . - . ID=gene-AL60_RS10325;Name=AL60_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10325;old_locus_tag=AL60_00948 NZ_KK316847.1 Protein Homology CDS 160177 160875 . - 0 ID=cds-WP_003419708.1;Parent=gene-AL60_RS10325;Dbxref=GenBank:WP_003419708.1;Name=WP_003419708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218185.1;locus_tag=AL60_RS10325;product=protease;protein_id=WP_003419708.1;transl_table=11 NZ_KK316847.1 RefSeq gene 161221 161739 . + . ID=gene-AL60_RS10330;Name=AL60_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10330;old_locus_tag=AL60_00949 NZ_KK316847.1 Protein Homology CDS 161221 161739 . + 0 ID=cds-WP_003419710.1;Parent=gene-AL60_RS10330;Dbxref=GenBank:WP_003419710.1;Name=WP_003419710.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218186.1;locus_tag=AL60_RS10330;product=phage holin family protein;protein_id=WP_003419710.1;transl_table=11 NZ_KK316847.1 RefSeq gene 161740 162723 . + . ID=gene-AL60_RS10335;Name=ephE;gbkey=Gene;gene=ephE;gene_biotype=protein_coding;locus_tag=AL60_RS10335;old_locus_tag=AL60_00950 NZ_KK316847.1 Protein Homology CDS 161740 162723 . + 0 ID=cds-WP_003419712.1;Parent=gene-AL60_RS10335;Dbxref=GenBank:WP_003419712.1;Name=WP_003419712.1;gbkey=CDS;gene=ephE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218187.1;locus_tag=AL60_RS10335;product=alpha/beta fold hydrolase;protein_id=WP_003419712.1;transl_table=11 NZ_KK316847.1 RefSeq gene 162716 163909 . - . ID=gene-AL60_RS10340;Name=marP;gbkey=Gene;gene=marP;gene_biotype=protein_coding;locus_tag=AL60_RS10340;old_locus_tag=AL60_00951 NZ_KK316847.1 Protein Homology CDS 162716 163909 . - 0 ID=cds-WP_003900734.1;Parent=gene-AL60_RS10340;Dbxref=GenBank:WP_003900734.1;Name=WP_003900734.1;gbkey=CDS;gene=marP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218188.1;locus_tag=AL60_RS10340;product=acid resistance serine protease MarP;protein_id=WP_003900734.1;transl_table=11 NZ_KK316847.1 RefSeq gene 163915 164736 . - . ID=gene-AL60_RS10345;Name=AL60_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10345;old_locus_tag=AL60_00952 NZ_KK316847.1 Protein Homology CDS 163915 164736 . - 0 ID=cds-WP_003419718.1;Parent=gene-AL60_RS10345;Dbxref=GenBank:WP_003419718.1;Name=WP_003419718.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218189.1;locus_tag=AL60_RS10345;product=NUDIX hydrolase;protein_id=WP_003419718.1;transl_table=11 NZ_KK316847.1 RefSeq gene 164868 165515 . - . ID=gene-AL60_RS10350;Name=AL60_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10350;old_locus_tag=AL60_00953 NZ_KK316847.1 Protein Homology CDS 164868 165515 . - 0 ID=cds-WP_003912310.1;Parent=gene-AL60_RS10350;Dbxref=GenBank:WP_003912310.1;Name=WP_003912310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912310.1;locus_tag=AL60_RS10350;product=TlpA family protein disulfide reductase;protein_id=WP_003912310.1;transl_table=11 NZ_KK316847.1 RefSeq gene 165551 166288 . - . ID=gene-AL60_RS10355;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AL60_RS10355;old_locus_tag=AL60_00954 NZ_KK316847.1 Protein Homology CDS 165551 166288 . - 0 ID=cds-WP_003419724.1;Parent=gene-AL60_RS10355;Dbxref=GenBank:WP_003419724.1;Name=WP_003419724.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218191.2;locus_tag=AL60_RS10355;product=endonuclease III;protein_id=WP_003419724.1;transl_table=11 NZ_KK316847.1 RefSeq gene 166396 166773 . + . ID=gene-AL60_RS10360;Name=AL60_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10360;old_locus_tag=AL60_00955 NZ_KK316847.1 Protein Homology CDS 166396 166773 . + 0 ID=cds-WP_003899635.1;Parent=gene-AL60_RS10360;Dbxref=GenBank:WP_003899635.1;Name=WP_003899635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218192.1;locus_tag=AL60_RS10360;product=hypothetical protein;protein_id=WP_003899635.1;transl_table=11 NZ_KK316847.1 RefSeq gene 166872 167546 . + . ID=gene-AL60_RS10365;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=AL60_RS10365;old_locus_tag=AL60_00956 NZ_KK316847.1 Protein Homology CDS 166872 167546 . + 0 ID=cds-WP_003419728.1;Parent=gene-AL60_RS10365;Dbxref=GenBank:WP_003419728.1;Name=WP_003419728.1;gbkey=CDS;gene=crp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218193.1;locus_tag=AL60_RS10365;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_003419728.1;transl_table=11 NZ_KK316847.1 RefSeq gene 167652 168446 . - . ID=gene-AL60_RS10370;Name=AL60_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10370;old_locus_tag=AL60_00957 NZ_KK316847.1 Protein Homology CDS 167652 168446 . - 0 ID=cds-WP_003419731.1;Parent=gene-AL60_RS10370;Dbxref=GenBank:WP_003419731.1;Name=WP_003419731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218194.1;locus_tag=AL60_RS10370;product=MBL fold metallo-hydrolase;protein_id=WP_003419731.1;transl_table=11 NZ_KK316847.1 RefSeq gene 168453 168908 . - . ID=gene-AL60_RS10375;Name=AL60_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10375;old_locus_tag=AL60_00958 NZ_KK316847.1 Protein Homology CDS 168453 168908 . - 0 ID=cds-WP_003419733.1;Parent=gene-AL60_RS10375;Dbxref=GenBank:WP_003419733.1;Name=WP_003419733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218195.1;locus_tag=AL60_RS10375;product=RidA family protein;protein_id=WP_003419733.1;transl_table=11 NZ_KK316847.1 RefSeq gene 168924 169085 . - . ID=gene-AL60_RS10380;Name=AL60_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10380;old_locus_tag=AL60_00959 NZ_KK316847.1 Protein Homology CDS 168924 169085 . - 0 ID=cds-WP_003419736.1;Parent=gene-AL60_RS10380;Dbxref=GenBank:WP_003419736.1;Name=WP_003419736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178004.1;locus_tag=AL60_RS10380;product=Sp36 family protein;protein_id=WP_003419736.1;transl_table=11 NZ_KK316847.1 RefSeq gene 169170 170192 . + . ID=gene-AL60_RS10385;Name=AL60_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10385;old_locus_tag=AL60_00960 NZ_KK316847.1 Protein Homology CDS 169170 170192 . + 0 ID=cds-WP_003419738.1;Parent=gene-AL60_RS10385;Dbxref=GenBank:WP_003419738.1;Name=WP_003419738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218196.1;locus_tag=AL60_RS10385;product=ATPase BagA;protein_id=WP_003419738.1;transl_table=11 NZ_KK316847.1 RefSeq gene 170189 171349 . + . ID=gene-AL60_RS10390;Name=AL60_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10390;old_locus_tag=AL60_00961 NZ_KK316847.1 Protein Homology CDS 170189 171349 . + 0 ID=cds-WP_003419740.1;Parent=gene-AL60_RS10390;Dbxref=GenBank:WP_003419740.1;Name=WP_003419740.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218197.1;locus_tag=AL60_RS10390;product=ATPase BagB;protein_id=WP_003419740.1;transl_table=11 NZ_KK316847.1 RefSeq gene 171592 171948 . - . ID=gene-AL60_RS10395;Name=whiB4;gbkey=Gene;gene=whiB4;gene_biotype=protein_coding;locus_tag=AL60_RS10395;old_locus_tag=AL60_00962 NZ_KK316847.1 Protein Homology CDS 171592 171948 . - 0 ID=cds-WP_003419743.1;Parent=gene-AL60_RS10395;Dbxref=GenBank:WP_003419743.1;Name=WP_003419743.1;gbkey=CDS;gene=whiB4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218198.2;locus_tag=AL60_RS10395;product=transcriptional regulator WhiB4;protein_id=WP_003419743.1;transl_table=11 NZ_KK316847.1 RefSeq gene 172311 174743 . + . ID=gene-AL60_RS10400;Name=ponA2;gbkey=Gene;gene=ponA2;gene_biotype=protein_coding;locus_tag=AL60_RS10400;old_locus_tag=AL60_00963 NZ_KK316847.1 Protein Homology CDS 172311 174743 . + 0 ID=cds-WP_003419746.1;Parent=gene-AL60_RS10400;Dbxref=GenBank:WP_003419746.1;Name=WP_003419746.1;gbkey=CDS;gene=ponA2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178005.1;locus_tag=AL60_RS10400;product=transglycosylase/D%2CD-transpeptidase PonA2;protein_id=WP_003419746.1;transl_table=11 NZ_KK316847.1 RefSeq gene 174812 175771 . + . ID=gene-AL60_RS10405;Name=AL60_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10405;old_locus_tag=AL60_00964 NZ_KK316847.1 Protein Homology CDS 174812 175771 . + 0 ID=cds-WP_003899637.1;Parent=gene-AL60_RS10405;Dbxref=GenBank:WP_003899637.1;Name=WP_003899637.1;Ontology_term=GO:0016311,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218200.1;locus_tag=AL60_RS10405;product=metallophosphoesterase;protein_id=WP_003899637.1;transl_table=11 NZ_KK316847.1 RefSeq gene 175768 176874 . + . ID=gene-AL60_RS10410;Name=AL60_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10410;old_locus_tag=AL60_00965 NZ_KK316847.1 Protein Homology CDS 175768 176874 . + 0 ID=cds-WP_003419750.1;Parent=gene-AL60_RS10410;Dbxref=GenBank:WP_003419750.1;Name=WP_003419750.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419750.1;locus_tag=AL60_RS10410;product=L-cysteine desulfhydrase Cds1;protein_id=WP_003419750.1;transl_table=11 NZ_KK316847.1 RefSeq gene 176936 177009 . + . ID=gene-AL60_RS10415;Name=AL60_RS10415;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS10415;old_locus_tag=AL60_00966 NZ_KK316847.1 tRNAscan-SE tRNA 176936 177009 . + . ID=rna-AL60_RS10415;Parent=gene-AL60_RS10415;anticodon=(pos:176970..176972);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS10415;product=tRNA-Pro NZ_KK316847.1 tRNAscan-SE exon 176936 177009 . + . ID=exon-AL60_RS10415-1;Parent=rna-AL60_RS10415;anticodon=(pos:176970..176972);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS10415;product=tRNA-Pro NZ_KK316847.1 RefSeq pseudogene 177432 177656 . + . ID=gene-AL60_RS27900;Name=AL60_RS27900;end_range=177656,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27900;partial=true;pseudo=true;start_range=.,177432 NZ_KK316847.1 Protein Homology CDS 177432 177656 . + 0 ID=cds-AL60_RS27900;Parent=gene-AL60_RS27900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=177656,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.6;locus_tag=AL60_RS27900;partial=true;product=Fic family protein;pseudo=true;start_range=.,177432;transl_table=11 NZ_KK316847.1 RefSeq gene 177690 179120 . - . ID=gene-AL60_RS10420;Name=AL60_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10420;old_locus_tag=AL60_00967 NZ_KK316847.1 Protein Homology CDS 177690 179120 . - 0 ID=cds-WP_003419754.1;Parent=gene-AL60_RS10420;Dbxref=GenBank:WP_003419754.1;Name=WP_003419754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218202.1;locus_tag=AL60_RS10420;product=cytochrome P450;protein_id=WP_003419754.1;transl_table=11 NZ_KK316847.1 RefSeq gene 179146 179478 . - . ID=gene-AL60_RS10425;Name=AL60_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10425;old_locus_tag=AL60_00968 NZ_KK316847.1 Protein Homology CDS 179146 179478 . - 0 ID=cds-WP_003901696.1;Parent=gene-AL60_RS10425;Dbxref=GenBank:WP_003901696.1;Name=WP_003901696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218203.1;locus_tag=AL60_RS10425;product=hypothetical protein;protein_id=WP_003901696.1;transl_table=11 NZ_KK316847.1 RefSeq gene 179718 180086 . - . ID=gene-AL60_RS10430;Name=rsfB;gbkey=Gene;gene=rsfB;gene_biotype=protein_coding;locus_tag=AL60_RS10430;old_locus_tag=AL60_00969 NZ_KK316847.1 Protein Homology CDS 179718 180086 . - 0 ID=cds-WP_003419762.1;Parent=gene-AL60_RS10430;Dbxref=GenBank:WP_003419762.1;Name=WP_003419762.1;Ontology_term=GO:0006355,GO:0043856;gbkey=CDS;gene=rsfB;go_function=anti-sigma factor antagonist activity|0043856||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218204.1;locus_tag=AL60_RS10430;product=STAS domain-containing protein;protein_id=WP_003419762.1;transl_table=11 NZ_KK316847.1 RefSeq gene 180288 180752 . - . ID=gene-AL60_RS10435;Name=AL60_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10435;old_locus_tag=AL60_00970 NZ_KK316847.1 Protein Homology CDS 180288 180752 . - 0 ID=cds-WP_003419765.1;Parent=gene-AL60_RS10435;Dbxref=GenBank:WP_003419765.1;Name=WP_003419765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218205.1;locus_tag=AL60_RS10435;product=GatB/YqeY domain-containing protein;protein_id=WP_003419765.1;transl_table=11 NZ_KK316847.1 RefSeq gene 180752 182107 . + . ID=gene-AL60_RS10440;Name=AL60_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10440;old_locus_tag=AL60_00971 NZ_KK316847.1 Protein Homology CDS 180752 182107 . + 0 ID=cds-WP_003899640.1;Parent=gene-AL60_RS10440;Dbxref=GenBank:WP_003899640.1;Name=WP_003899640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631611.1;locus_tag=AL60_RS10440;product=DUF7847 domain-containing protein;protein_id=WP_003899640.1;transl_table=11 NZ_KK316847.1 RefSeq gene 182134 182787 . + . ID=gene-AL60_RS10445;Name=AL60_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10445;old_locus_tag=AL60_00972 NZ_KK316847.1 Protein Homology CDS 182134 182787 . + 0 ID=cds-WP_003419770.1;Parent=gene-AL60_RS10445;Dbxref=GenBank:WP_003419770.1;Name=WP_003419770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218207.1;locus_tag=AL60_RS10445;product=DUF4129 domain-containing protein;protein_id=WP_003419770.1;transl_table=11 NZ_KK316847.1 RefSeq gene 182769 183914 . + . ID=gene-AL60_RS10450;Name=AL60_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10450;old_locus_tag=AL60_00973 NZ_KK316847.1 Protein Homology CDS 182769 183914 . + 0 ID=cds-WP_042508092.1;Parent=gene-AL60_RS10450;Dbxref=GenBank:WP_042508092.1;Name=WP_042508092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899642.1;locus_tag=AL60_RS10450;product=DUF4350 domain-containing protein;protein_id=WP_042508092.1;transl_table=11 NZ_KK316847.1 RefSeq gene 183911 184987 . + . ID=gene-AL60_RS10455;Name=AL60_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10455;old_locus_tag=AL60_00974 NZ_KK316847.1 Protein Homology CDS 183911 184987 . + 0 ID=cds-WP_003419775.1;Parent=gene-AL60_RS10455;Dbxref=GenBank:WP_003419775.1;Name=WP_003419775.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218209.1;locus_tag=AL60_RS10455;product=AAA family ATPase;protein_id=WP_003419775.1;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 184996 185067 . + . ID=gene-AL60_RS28090;Name=AL60_RS28090;end_range=185067,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28090;partial=true;pseudo=true NZ_KK316847.1 Protein Homology CDS 184996 185067 . + 0 ID=cds-AL60_RS28090;Parent=gene-AL60_RS28090;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=185067,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=AL60_RS28090;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316847.1 RefSeq gene 185121 186443 . + . ID=gene-AL60_RS10460;Name=AL60_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10460;old_locus_tag=AL60_00975 NZ_KK316847.1 Protein Homology CDS 185121 186443 . + 0 ID=cds-WP_003907105.1;Parent=gene-AL60_RS10460;Dbxref=GenBank:WP_003907105.1;Name=WP_003907105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218210.1;locus_tag=AL60_RS10460;product=DUF58 domain-containing protein;protein_id=WP_003907105.1;transl_table=11 NZ_KK316847.1 RefSeq gene 186517 187509 . - . ID=gene-AL60_RS10465;Name=AL60_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10465;old_locus_tag=AL60_00976 NZ_KK316847.1 Protein Homology CDS 186517 187509 . - 0 ID=cds-WP_003419778.1;Parent=gene-AL60_RS10465;Dbxref=GenBank:WP_003419778.1;Name=WP_003419778.1;Ontology_term=GO:0030435,GO:0042173,GO:1901893;gbkey=CDS;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA,regulation of sporulation resulting in formation of a cellular spore|0042173||IEA,positive regulation of cell septum assembly|1901893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218211.1;locus_tag=AL60_RS10465;product=stage II sporulation protein M;protein_id=WP_003419778.1;transl_table=11 NZ_KK316847.1 RefSeq gene 187601 188533 . + . ID=gene-AL60_RS10470;Name=AL60_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10470;old_locus_tag=AL60_00977 NZ_KK316847.1 Protein Homology CDS 187601 188533 . + 0 ID=cds-WP_012054378.1;Parent=gene-AL60_RS10470;Dbxref=GenBank:WP_012054378.1;Name=WP_012054378.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218212.1;locus_tag=AL60_RS10470;product=RDD family protein;protein_id=WP_012054378.1;transl_table=11 NZ_KK316847.1 RefSeq gene 188597 190150 . - . ID=gene-AL60_RS10475;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AL60_RS10475;old_locus_tag=AL60_00978 NZ_KK316847.1 Protein Homology CDS 188597 190150 . - 0 ID=cds-WP_003899643.1;Parent=gene-AL60_RS10475;Dbxref=GenBank:WP_003899643.1;Name=WP_003899643.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218213.1;locus_tag=AL60_RS10475;product=glycerol kinase GlpK;protein_id=WP_003899643.1;transl_table=11 NZ_KK316847.1 RefSeq gene 190200 190637 . - . ID=gene-AL60_RS10480;Name=AL60_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10480;old_locus_tag=AL60_00979 NZ_KK316847.1 Protein Homology CDS 190200 190637 . - 0 ID=cds-WP_003899644.1;Parent=gene-AL60_RS10480;Dbxref=GenBank:WP_003899644.1;Name=WP_003899644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218214.1;locus_tag=AL60_RS10480;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003899644.1;transl_table=11 NZ_KK316847.1 RefSeq gene 190634 190858 . - . ID=gene-AL60_RS10485;Name=AL60_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10485;old_locus_tag=AL60_00980 NZ_KK316847.1 Protein Homology CDS 190634 190858 . - 0 ID=cds-WP_003419787.1;Parent=gene-AL60_RS10485;Dbxref=GenBank:WP_003419787.1;Name=WP_003419787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007412423.1;locus_tag=AL60_RS10485;product=antitoxin VapB48;protein_id=WP_003419787.1;transl_table=11 NZ_KK316847.1 RefSeq gene 190945 192417 . + . ID=gene-AL60_RS10490;Name=AL60_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10490;old_locus_tag=AL60_00981 NZ_KK316847.1 Protein Homology CDS 190945 192417 . + 0 ID=cds-WP_023641738.1;Parent=gene-AL60_RS10490;Dbxref=GenBank:WP_023641738.1;Name=WP_023641738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419790.1;locus_tag=AL60_RS10490;product=glutamate-cysteine ligase family protein;protein_id=WP_023641738.1;transl_table=11 NZ_KK316847.1 RefSeq gene 192439 193140 . + . ID=gene-AL60_RS10495;Name=AL60_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10495;old_locus_tag=AL60_00982 NZ_KK316847.1 Protein Homology CDS 192439 193140 . + 0 ID=cds-WP_003419793.1;Parent=gene-AL60_RS10495;Dbxref=GenBank:WP_003419793.1;Name=WP_003419793.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218216.1;locus_tag=AL60_RS10495;product=class I SAM-dependent methyltransferase;protein_id=WP_003419793.1;transl_table=11 NZ_KK316847.1 RefSeq gene 193143 194315 . - . ID=gene-AL60_RS10500;Name=egtE;gbkey=Gene;gene=egtE;gene_biotype=protein_coding;locus_tag=AL60_RS10500;old_locus_tag=AL60_00983 NZ_KK316847.1 Protein Homology CDS 193143 194315 . - 0 ID=cds-WP_003901701.1;Parent=gene-AL60_RS10500;Dbxref=GenBank:WP_003901701.1;Name=WP_003901701.1;Ontology_term=GO:0052699,GO:0016829;gbkey=CDS;gene=egtE;go_function=lyase activity|0016829||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218217.1;locus_tag=AL60_RS10500;product=ergothioneine biosynthesis PLP-dependent enzyme EgtE;protein_id=WP_003901701.1;transl_table=11 NZ_KK316847.1 RefSeq gene 194346 195311 . - . ID=gene-AL60_RS10505;Name=egtD;gbkey=Gene;gene=egtD;gene_biotype=protein_coding;locus_tag=AL60_RS10505;old_locus_tag=AL60_00984 NZ_KK316847.1 Protein Homology CDS 194346 195311 . - 0 ID=cds-WP_003419799.1;Parent=gene-AL60_RS10505;Dbxref=GenBank:WP_003419799.1;Name=WP_003419799.1;Ontology_term=GO:0052699,GO:0052706;gbkey=CDS;gene=egtD;go_function=L-histidine N(alpha)-methyltransferase activity|0052706||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218218.1;locus_tag=AL60_RS10505;product=L-histidine N(alpha)-methyltransferase;protein_id=WP_003419799.1;transl_table=11 NZ_KK316847.1 RefSeq gene 195308 196009 . - . ID=gene-AL60_RS10510;Name=egtC;gbkey=Gene;gene=egtC;gene_biotype=protein_coding;locus_tag=AL60_RS10510;old_locus_tag=AL60_00985 NZ_KK316847.1 Protein Homology CDS 195308 196009 . - 0 ID=cds-WP_003419806.1;Parent=gene-AL60_RS10510;Dbxref=GenBank:WP_003419806.1;Name=WP_003419806.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtC;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218219.1;locus_tag=AL60_RS10510;product=ergothioneine biosynthesis protein EgtC;protein_id=WP_003419806.1;transl_table=11 NZ_KK316847.1 RefSeq gene 196009 197286 . - . ID=gene-AL60_RS10515;Name=egtB;gbkey=Gene;gene=egtB;gene_biotype=protein_coding;locus_tag=AL60_RS10515;old_locus_tag=AL60_00986 NZ_KK316847.1 Protein Homology CDS 196009 197286 . - 0 ID=cds-WP_003419808.1;Parent=gene-AL60_RS10515;Dbxref=GenBank:WP_003419808.1;Name=WP_003419808.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtB;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218220.1;locus_tag=AL60_RS10515;product=ergothioneine biosynthesis protein EgtB;protein_id=WP_003419808.1;transl_table=11 NZ_KK316847.1 RefSeq gene 197283 198581 . - . ID=gene-AL60_RS10520;Name=egtA;gbkey=Gene;gene=egtA;gene_biotype=protein_coding;locus_tag=AL60_RS10520;old_locus_tag=AL60_00987 NZ_KK316847.1 Protein Homology CDS 197283 198581 . - 0 ID=cds-WP_012054380.1;Parent=gene-AL60_RS10520;Dbxref=GenBank:WP_012054380.1;Name=WP_012054380.1;Ontology_term=GO:0052699,GO:0004357;gbkey=CDS;gene=egtA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218221.1;locus_tag=AL60_RS10520;product=ergothioneine biosynthesis glutamate--cysteine ligase EgtA;protein_id=WP_012054380.1;transl_table=11 NZ_KK316847.1 RefSeq gene 198713 199357 . - . ID=gene-AL60_RS10525;Name=AL60_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10525;old_locus_tag=AL60_00988 NZ_KK316847.1 Protein Homology CDS 198713 199357 . - 0 ID=cds-WP_012054381.1;Parent=gene-AL60_RS10525;Dbxref=GenBank:WP_012054381.1;Name=WP_012054381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218222.1;locus_tag=AL60_RS10525;product=sensor domain-containing protein;protein_id=WP_012054381.1;transl_table=11 NZ_KK316847.1 RefSeq gene 199486 199875 . - . ID=gene-AL60_RS10530;Name=AL60_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10530;old_locus_tag=AL60_00989 NZ_KK316847.1 Protein Homology CDS 199486 199875 . - 0 ID=cds-WP_003419814.1;Parent=gene-AL60_RS10530;Dbxref=GenBank:WP_003419814.1;Name=WP_003419814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178006.1;locus_tag=AL60_RS10530;product=hypothetical protein;protein_id=WP_003419814.1;transl_table=11 NZ_KK316847.1 RefSeq gene 199986 200306 . - . ID=gene-AL60_RS10535;Name=AL60_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10535;old_locus_tag=AL60_00990 NZ_KK316847.1 Protein Homology CDS 199986 200306 . - 0 ID=cds-WP_003419816.1;Parent=gene-AL60_RS10535;Dbxref=GenBank:WP_003419816.1;Name=WP_003419816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218223.1;locus_tag=AL60_RS10535;product=hypothetical protein;protein_id=WP_003419816.1;transl_table=11 NZ_KK316847.1 RefSeq gene 200425 201573 . - . ID=gene-AL60_RS10540;Name=AL60_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10540;old_locus_tag=AL60_00991 NZ_KK316847.1 Protein Homology CDS 200425 201573 . - 0 ID=cds-WP_003899648.1;Parent=gene-AL60_RS10540;Dbxref=GenBank:WP_003899648.1;Name=WP_003899648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719265.1;locus_tag=AL60_RS10540;product=DUF4185 domain-containing protein;protein_id=WP_003899648.1;transl_table=11 NZ_KK316847.1 RefSeq gene 201575 202612 . - . ID=gene-AL60_RS10545;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AL60_RS10545;old_locus_tag=AL60_00992 NZ_KK316847.1 Protein Homology CDS 201575 202612 . - 0 ID=cds-WP_003419825.1;Parent=gene-AL60_RS10545;Dbxref=GenBank:WP_003419825.1;Name=WP_003419825.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218225.1;locus_tag=AL60_RS10545;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_003419825.1;transl_table=11 NZ_KK316847.1 RefSeq gene 202613 203878 . - . ID=gene-AL60_RS10550;Name=ask;gbkey=Gene;gene=ask;gene_biotype=protein_coding;locus_tag=AL60_RS10550;old_locus_tag=AL60_00993 NZ_KK316847.1 Protein Homology CDS 202613 203878 . - 0 ID=cds-WP_003419828.1;Parent=gene-AL60_RS10550;Dbxref=GenBank:WP_003419828.1;Name=WP_003419828.1;Ontology_term=GO:0008652,GO:0004072;gbkey=CDS;gene=ask;go_function=aspartate kinase activity|0004072||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218226.1;locus_tag=AL60_RS10550;product=aspartate kinase;protein_id=WP_003419828.1;transl_table=11 NZ_KK316847.1 RefSeq gene 204135 206069 . + . ID=gene-AL60_RS10555;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=AL60_RS10555;old_locus_tag=AL60_00994 NZ_KK316847.1 Protein Homology CDS 204135 206069 . + 0 ID=cds-WP_003902547.1;Parent=gene-AL60_RS10555;Dbxref=GenBank:WP_003902547.1;Name=WP_003902547.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218227.3;locus_tag=AL60_RS10555;product=2-isopropylmalate synthase;protein_id=WP_003902547.1;transl_table=11 NZ_KK316847.1 RefSeq gene 206135 207124 . - . ID=gene-AL60_RS10560;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AL60_RS10560;old_locus_tag=AL60_00995 NZ_KK316847.1 Protein Homology CDS 206135 207124 . - 0 ID=cds-WP_003900737.1;Parent=gene-AL60_RS10560;Dbxref=GenBank:WP_003900737.1;Name=WP_003900737.1;Ontology_term=GO:0006260,GO:0003677;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218228.1;locus_tag=AL60_RS10560;product=DEDDh family exonuclease;protein_id=WP_003900737.1;transl_table=11 NZ_KK316847.1 RefSeq gene 207376 208617 . + . ID=gene-AL60_RS10565;Name=AL60_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10565;old_locus_tag=AL60_00996 NZ_KK316847.1 Protein Homology CDS 207376 208617 . + 0 ID=cds-WP_003900738.1;Parent=gene-AL60_RS10565;Dbxref=GenBank:WP_003900738.1;Name=WP_003900738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218229.1;locus_tag=AL60_RS10565;product=Mur ligase family protein;protein_id=WP_003900738.1;transl_table=11 NZ_KK316847.1 RefSeq gene 208622 209317 . + . ID=gene-AL60_RS10570;Name=AL60_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10570;old_locus_tag=AL60_00997 NZ_KK316847.1 Protein Homology CDS 208622 209317 . + 0 ID=cds-WP_003900739.1;Parent=gene-AL60_RS10570;Dbxref=GenBank:WP_003900739.1;Name=WP_003900739.1;Ontology_term=GO:0004359;gbkey=CDS;go_function=glutaminase activity|0004359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218230.1;locus_tag=AL60_RS10570;product=type 1 glutamine amidotransferase;protein_id=WP_003900739.1;transl_table=11 NZ_KK316847.1 RefSeq gene 209326 210216 . - . ID=gene-AL60_RS10575;Name=AL60_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10575;old_locus_tag=AL60_00998 NZ_KK316847.1 Protein Homology CDS 209326 210216 . - 0 ID=cds-WP_003420405.1;Parent=gene-AL60_RS10575;Dbxref=GenBank:WP_003420405.1;Name=WP_003420405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218231.1;locus_tag=AL60_RS10575;product=hypothetical protein;protein_id=WP_003420405.1;transl_table=11 NZ_KK316847.1 RefSeq gene 210284 210895 . - . ID=gene-AL60_RS10580;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AL60_RS10580;old_locus_tag=AL60_00999 NZ_KK316847.1 Protein Homology CDS 210284 210895 . - 0 ID=cds-WP_003420407.1;Parent=gene-AL60_RS10580;Dbxref=GenBank:WP_003420407.1;Name=WP_003420407.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218232.1;locus_tag=AL60_RS10580;product=recombination mediator RecR;protein_id=WP_003420407.1;transl_table=11 NZ_KK316847.1 RefSeq gene 210907 211308 . - . ID=gene-AL60_RS10585;Name=AL60_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10585;old_locus_tag=AL60_01000 NZ_KK316847.1 Protein Homology CDS 210907 211308 . - 0 ID=cds-WP_003420408.1;Parent=gene-AL60_RS10585;Dbxref=GenBank:WP_003420408.1;Name=WP_003420408.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218233.1;locus_tag=AL60_RS10585;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_003420408.1;transl_table=11 NZ_KK316847.1 RefSeq gene 211407 212168 . + . ID=gene-AL60_RS10590;Name=AL60_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10590;old_locus_tag=AL60_01001 NZ_KK316847.1 Protein Homology CDS 211407 212168 . + 0 ID=cds-WP_003912326.1;Parent=gene-AL60_RS10590;Dbxref=GenBank:WP_003912326.1;Name=WP_003912326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912326.1;locus_tag=AL60_RS10590;product=Rv3717 family N-acetylmuramoyl-L-alanine amidase;protein_id=WP_003912326.1;transl_table=11 NZ_KK316847.1 RefSeq gene 212210 212653 . - . ID=gene-AL60_RS10595;Name=AL60_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10595;old_locus_tag=AL60_01002 NZ_KK316847.1 Protein Homology CDS 212210 212653 . - 0 ID=cds-WP_003899651.1;Parent=gene-AL60_RS10595;Dbxref=GenBank:WP_003899651.1;Name=WP_003899651.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218235.1;locus_tag=AL60_RS10595;product=SRPBCC family protein;protein_id=WP_003899651.1;transl_table=11 NZ_KK316847.1 RefSeq gene 212701 214113 . + . ID=gene-AL60_RS10600;Name=AL60_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10600;old_locus_tag=AL60_01003 NZ_KK316847.1 Protein Homology CDS 212701 214113 . + 0 ID=cds-WP_003420413.1;Parent=gene-AL60_RS10600;Dbxref=GenBank:WP_003420413.1;Name=WP_003420413.1;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013128575.1;locus_tag=AL60_RS10600;product=FAD-binding oxidoreductase;protein_id=WP_003420413.1;transl_table=11 NZ_KK316847.1 RefSeq gene 214110 215393 . + . ID=gene-AL60_RS10605;Name=AL60_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10605;old_locus_tag=AL60_01004 NZ_KK316847.1 Protein Homology CDS 214110 215393 . + 0 ID=cds-WP_012775826.1;Parent=gene-AL60_RS10605;Dbxref=GenBank:WP_012775826.1;Name=WP_012775826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899652.1;locus_tag=AL60_RS10605;product=class I SAM-dependent methyltransferase;protein_id=WP_012775826.1;transl_table=11 NZ_KK316847.1 RefSeq gene 215390 217126 . - . ID=gene-AL60_RS10610;Name=dnaZX;gbkey=Gene;gene=dnaZX;gene_biotype=protein_coding;locus_tag=AL60_RS10610;old_locus_tag=AL60_01005 NZ_KK316847.1 Protein Homology CDS 215390 217126 . - 0 ID=cds-WP_003420417.1;Parent=gene-AL60_RS10610;Dbxref=GenBank:WP_003420417.1;Name=WP_003420417.1;gbkey=CDS;gene=dnaZX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218238.1;locus_tag=AL60_RS10610;product=DNA polymerase III subunits gamma/tau;protein_id=WP_003420417.1;transl_table=11 NZ_KK316847.1 RefSeq gene 217216 218523 . - . ID=gene-AL60_RS10615;Name=AL60_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10615;old_locus_tag=AL60_01006 NZ_KK316847.1 Protein Homology CDS 217216 218523 . - 0 ID=cds-WP_003899653.1;Parent=gene-AL60_RS10615;Dbxref=GenBank:WP_003899653.1;Name=WP_003899653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218239.2;locus_tag=AL60_RS10615;product=aspartate aminotransferase type Ic;protein_id=WP_003899653.1;transl_table=11 NZ_KK316847.1 RefSeq gene 218585 218679 . - . ID=gene-AL60_RS25665;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=AL60_RS25665 NZ_KK316847.1 cmsearch SRP_RNA 218585 218679 . - . ID=rna-AL60_RS25665;Parent=gene-AL60_RS25665;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL60_RS25665;product=signal recognition particle sRNA small type NZ_KK316847.1 cmsearch exon 218585 218679 . - . ID=exon-AL60_RS25665-1;Parent=rna-AL60_RS25665;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL60_RS25665;product=signal recognition particle sRNA small type NZ_KK316847.1 RefSeq gene 218740 218828 . + . ID=gene-AL60_RS10620;Name=AL60_RS10620;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS10620;old_locus_tag=AL60_01007 NZ_KK316847.1 tRNAscan-SE tRNA 218740 218828 . + . ID=rna-AL60_RS10620;Parent=gene-AL60_RS10620;anticodon=(pos:218774..218776);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS10620;product=tRNA-Ser NZ_KK316847.1 tRNAscan-SE exon 218740 218828 . + . ID=exon-AL60_RS10620-1;Parent=rna-AL60_RS10620;anticodon=(pos:218774..218776);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS10620;product=tRNA-Ser NZ_KK316847.1 RefSeq gene 218931 219695 . + . ID=gene-AL60_RS10625;Name=lucA;gbkey=Gene;gene=lucA;gene_biotype=protein_coding;locus_tag=AL60_RS10625;old_locus_tag=AL60_01008 NZ_KK316847.1 Protein Homology CDS 218931 219695 . + 0 ID=cds-WP_003420421.1;Parent=gene-AL60_RS10625;Dbxref=GenBank:WP_003420421.1;Name=WP_003420421.1;gbkey=CDS;gene=lucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218240.1;locus_tag=AL60_RS10625;product=lipid uptake coordinator LucA;protein_id=WP_003420421.1;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 219862 220564 . + . ID=gene-AL60_RS10630;Name=AL60_RS10630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS10630;old_locus_tag=AL60_01010;pseudo=true NZ_KK316847.1 Protein Homology CDS 219862 220564 . + 0 ID=cds-AL60_RS10630;Parent=gene-AL60_RS10630;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420425.1;locus_tag=AL60_RS10630;product=cutinase family protein;pseudo=true;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 220624 221609 . + . ID=gene-AL60_RS10635;Name=AL60_RS10635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS10635;old_locus_tag=AL60_01011;pseudo=true NZ_KK316847.1 Protein Homology CDS 220624 221609 . + 0 ID=cds-AL60_RS10635;Parent=gene-AL60_RS10635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015575361.1;locus_tag=AL60_RS10635;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_KK316847.1 RefSeq gene 221606 221752 . - . ID=gene-AL60_RS27070;Name=AL60_RS27070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27070 NZ_KK316847.1 Protein Homology CDS 221606 221752 . - 0 ID=cds-WP_003420429.1;Parent=gene-AL60_RS27070;Dbxref=GenBank:WP_003420429.1;Name=WP_003420429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913883.1;locus_tag=AL60_RS27070;product=hypothetical protein;protein_id=WP_003420429.1;transl_table=11 NZ_KK316847.1 RefSeq gene 221816 223009 . + . ID=gene-AL60_RS10640;Name=AL60_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10640;old_locus_tag=AL60_01012 NZ_KK316847.1 Protein Homology CDS 221816 223009 . + 0 ID=cds-WP_003900742.1;Parent=gene-AL60_RS10640;Dbxref=GenBank:WP_003900742.1;Name=WP_003900742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218243.1;locus_tag=AL60_RS10640;product=zinc-binding dehydrogenase;protein_id=WP_003900742.1;transl_table=11 NZ_KK316847.1 RefSeq gene 223350 225158 . + . ID=gene-AL60_RS10645;Name=AL60_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10645;old_locus_tag=AL60_01013 NZ_KK316847.1 Protein Homology CDS 223350 225158 . + 0 ID=cds-WP_003907115.1;Parent=gene-AL60_RS10645;Dbxref=GenBank:WP_003907115.1;Name=WP_003907115.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218244.1;locus_tag=AL60_RS10645;product=hydroxysqualene dehydroxylase;protein_id=WP_003907115.1;transl_table=11 NZ_KK316847.1 RefSeq gene 225268 228465 . + . ID=gene-AL60_RS10650;Name=AL60_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10650;old_locus_tag=AL60_01014 NZ_KK316847.1 Protein Homology CDS 225268 228465 . + 0 ID=cds-WP_003900743.1;Parent=gene-AL60_RS10650;Dbxref=GenBank:WP_003900743.1;Name=WP_003900743.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218245.1;locus_tag=AL60_RS10650;product=MFS transporter;protein_id=WP_003900743.1;transl_table=11 NZ_KK316847.1 RefSeq gene 228644 231010 . + . ID=gene-AL60_RS10655;Name=AL60_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10655;old_locus_tag=AL60_01015 NZ_KK316847.1 Protein Homology CDS 228644 231010 . + 0 ID=cds-WP_003899656.1;Parent=gene-AL60_RS10655;Dbxref=GenBank:WP_003899656.1;Name=WP_003899656.1;Ontology_term=GO:0003824,GO:0051539;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899656.1;locus_tag=AL60_RS10655;product=radical SAM protein;protein_id=WP_003899656.1;transl_table=11 NZ_KK316847.1 RefSeq gene 231075 232115 . - . ID=gene-AL60_RS10660;Name=ligD;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=AL60_RS10660;old_locus_tag=AL60_01016 NZ_KK316847.1 Protein Homology CDS 231075 232115 . - 0 ID=cds-WP_003899657.1;Parent=gene-AL60_RS10660;Dbxref=GenBank:WP_003899657.1;Name=WP_003899657.1;gbkey=CDS;gene=ligD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218247.1;locus_tag=AL60_RS10660;product=non-homologous end-joining DNA ligase;protein_id=WP_003899657.1;transl_table=11 NZ_KK316847.1 RefSeq gene 232153 233229 . + . ID=gene-AL60_RS10665;Name=ligC;gbkey=Gene;gene=ligC;gene_biotype=protein_coding;locus_tag=AL60_RS10665;old_locus_tag=AL60_01017 NZ_KK316847.1 Protein Homology CDS 232153 233229 . + 0 ID=cds-WP_003420435.1;Parent=gene-AL60_RS10665;Dbxref=GenBank:WP_003420435.1;Name=WP_003420435.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910,GO:0005524;gbkey=CDS;gene=ligC;go_function=DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218248.1;locus_tag=AL60_RS10665;product=ATP-dependent DNA ligase;protein_id=WP_003420435.1;transl_table=11 NZ_KK316847.1 RefSeq gene 233329 234387 . + . ID=gene-AL60_RS10670;Name=AL60_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10670;old_locus_tag=AL60_01018 NZ_KK316847.1 Protein Homology CDS 233329 234387 . + 0 ID=cds-WP_003420436.1;Parent=gene-AL60_RS10670;Dbxref=GenBank:WP_003420436.1;Name=WP_003420436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218249.1;locus_tag=AL60_RS10670;product=DUF2330 domain-containing protein;protein_id=WP_003420436.1;transl_table=11 NZ_KK316847.1 RefSeq gene 234407 234907 . - . ID=gene-AL60_RS10675;Name=AL60_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10675;old_locus_tag=AL60_01019 NZ_KK316847.1 Protein Homology CDS 234407 234907 . - 0 ID=cds-WP_003420437.1;Parent=gene-AL60_RS10675;Dbxref=GenBank:WP_003420437.1;Name=WP_003420437.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218250.1;locus_tag=AL60_RS10675;product=NUDIX hydrolase;protein_id=WP_003420437.1;transl_table=11 NZ_KK316847.1 RefSeq gene 234921 236285 . - . ID=gene-AL60_RS10680;Name=AL60_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10680;old_locus_tag=AL60_01020 NZ_KK316847.1 Protein Homology CDS 234921 236285 . - 0 ID=cds-WP_003420440.1;Parent=gene-AL60_RS10680;Dbxref=GenBank:WP_003420440.1;Name=WP_003420440.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218251.1;locus_tag=AL60_RS10680;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003420440.1;transl_table=11 NZ_KK316847.1 RefSeq gene 236484 236972 . + . ID=gene-AL60_RS10685;Name=AL60_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10685;old_locus_tag=AL60_01021 NZ_KK316847.1 Protein Homology CDS 236484 236972 . + 0 ID=cds-WP_003899658.1;Parent=gene-AL60_RS10685;Dbxref=GenBank:WP_003899658.1;Name=WP_003899658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218252.1;locus_tag=AL60_RS10685;product=adenosine-specific kinase;protein_id=WP_003899658.1;transl_table=11 NZ_KK316847.1 RefSeq gene 237029 238090 . + . ID=gene-AL60_RS10690;Name=AL60_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10690;old_locus_tag=AL60_01022 NZ_KK316847.1 Protein Homology CDS 237029 238090 . + 0 ID=cds-WP_003899659.1;Parent=gene-AL60_RS10690;Dbxref=GenBank:WP_003899659.1;Name=WP_003899659.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218253.1;locus_tag=AL60_RS10690;product=AraC family transcriptional regulator;protein_id=WP_003899659.1;transl_table=11 NZ_KK316847.1 RefSeq gene 238094 239683 . + . ID=gene-AL60_RS10695;Name=AL60_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10695;old_locus_tag=AL60_01023 NZ_KK316847.1 Protein Homology CDS 238094 239683 . + 0 ID=cds-WP_003899660.1;Parent=gene-AL60_RS10695;Dbxref=GenBank:WP_003899660.1;Name=WP_003899660.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218254.1;locus_tag=AL60_RS10695;product=threonine/serine exporter family protein;protein_id=WP_003899660.1;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 239680 240912 . - . ID=gene-AL60_RS10700;Name=AL60_RS10700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS10700;old_locus_tag=AL60_01024;pseudo=true NZ_KK316847.1 Protein Homology CDS 239680 240912 . - 0 ID=cds-AL60_RS10700;Parent=gene-AL60_RS10700;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909072.1;locus_tag=AL60_RS10700;product=PPE family protein;pseudo=true;transl_table=11 NZ_KK316847.1 RefSeq gene 241228 242574 . - . ID=gene-AL60_RS10710;Name=AL60_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10710;old_locus_tag=AL60_01026 NZ_KK316847.1 Protein Homology CDS 241228 242574 . - 0 ID=cds-WP_003900746.1;Parent=gene-AL60_RS10710;Dbxref=GenBank:WP_003900746.1;Name=WP_003900746.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218257.1;locus_tag=AL60_RS10710;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003900746.1;transl_table=11 NZ_KK316847.1 RefSeq gene 242574 243248 . - . ID=gene-AL60_RS28095;Name=AL60_RS28095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28095;old_locus_tag=AL60_01027 NZ_KK316847.1 GeneMarkS-2+ CDS 242574 243248 . - 0 ID=cds-WP_003900747.1;Parent=gene-AL60_RS28095;Dbxref=GenBank:WP_003900747.1;Name=WP_003900747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS28095;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003900747.1;transl_table=11 NZ_KK316847.1 RefSeq gene 243245 243760 . - . ID=gene-AL60_RS28100;Name=AL60_RS28100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28100;old_locus_tag=AL60_01028 NZ_KK316847.1 GeneMarkS-2+ CDS 243245 243760 . - 0 ID=cds-WP_369810406.1;Parent=gene-AL60_RS28100;Dbxref=GenBank:WP_369810406.1;Name=WP_369810406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS28100;product=hypothetical protein;protein_id=WP_369810406.1;transl_table=11 NZ_KK316847.1 RefSeq gene 243786 245768 . - . ID=gene-AL60_RS10725;Name=ctpJ;gbkey=Gene;gene=ctpJ;gene_biotype=protein_coding;locus_tag=AL60_RS10725;old_locus_tag=AL60_01029 NZ_KK316847.1 Protein Homology CDS 243786 245768 . - 0 ID=cds-WP_003899665.1;Parent=gene-AL60_RS10725;Dbxref=GenBank:WP_003899665.1;Name=WP_003899665.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872;gbkey=CDS;gene=ctpJ;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218260.1;locus_tag=AL60_RS10725;product=heavy metal translocating P-type ATPase;protein_id=WP_003899665.1;transl_table=11 NZ_KK316847.1 RefSeq gene 245835 246197 . + . ID=gene-AL60_RS10730;Name=nmtR;gbkey=Gene;gene=nmtR;gene_biotype=protein_coding;locus_tag=AL60_RS10730;old_locus_tag=AL60_01030 NZ_KK316847.1 Protein Homology CDS 245835 246197 . + 0 ID=cds-WP_003901716.1;Parent=gene-AL60_RS10730;Dbxref=GenBank:WP_003901716.1;Name=WP_003901716.1;gbkey=CDS;gene=nmtR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218261.1;locus_tag=AL60_RS10730;product=Ni(II)/Co(II)-sensing metalloregulatory transcriptional repressor NmtR;protein_id=WP_003901716.1;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 246302 246493 . - . ID=gene-AL60_RS10735;Name=AL60_RS10735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS10735;old_locus_tag=AL60_01031;partial=true;pseudo=true;start_range=.,246302 NZ_KK316847.1 Protein Homology CDS 246302 246493 . - 0 ID=cds-AL60_RS10735;Parent=gene-AL60_RS10735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019930003.1;locus_tag=AL60_RS10735;partial=true;product=DUF2237 family protein;pseudo=true;start_range=.,246302;transl_table=11 NZ_KK316847.1 RefSeq gene 246566 246901 . - . ID=gene-AL60_RS10740;Name=AL60_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10740;old_locus_tag=AL60_01032 NZ_KK316847.1 Protein Homology CDS 246566 246901 . - 0 ID=cds-WP_003899670.1;Parent=gene-AL60_RS10740;Dbxref=GenBank:WP_003899670.1;Name=WP_003899670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178011.1;locus_tag=AL60_RS10740;product=PE domain-containing protein;protein_id=WP_003899670.1;transl_table=11 NZ_KK316847.1 RefSeq gene 247119 247502 . + . ID=gene-AL60_RS10745;Name=AL60_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10745;old_locus_tag=AL60_01033 NZ_KK316847.1 Protein Homology CDS 247119 247502 . + 0 ID=cds-WP_003899671.1;Parent=gene-AL60_RS10745;Dbxref=GenBank:WP_003899671.1;Name=WP_003899671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218264.1;locus_tag=AL60_RS10745;product=hypothetical protein;protein_id=WP_003899671.1;transl_table=11 NZ_KK316847.1 RefSeq gene 247632 247991 . + . ID=gene-AL60_RS10750;Name=AL60_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10750;old_locus_tag=AL60_01034 NZ_KK316847.1 Protein Homology CDS 247632 247991 . + 0 ID=cds-WP_003899672.1;Parent=gene-AL60_RS10750;Dbxref=GenBank:WP_003899672.1;Name=WP_003899672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218265.1;locus_tag=AL60_RS10750;product=hypothetical protein;protein_id=WP_003899672.1;transl_table=11 NZ_KK316847.1 RefSeq gene 248024 248374 . - . ID=gene-AL60_RS0104420;Name=AL60_RS0104420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104420;old_locus_tag=AL60_01035 NZ_KK316847.1 GeneMarkS-2+ CDS 248024 248374 . - 0 ID=cds-WP_003917953.1;Parent=gene-AL60_RS0104420;Dbxref=GenBank:WP_003917953.1;Name=WP_003917953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS0104420;product=VapC50 family PIN domain-containing toxin;protein_id=WP_003917953.1;transl_table=11 NZ_KK316847.1 RefSeq gene 248601 249047 . - . ID=gene-AL60_RS10755;Name=AL60_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10755;old_locus_tag=AL60_01037 NZ_KK316847.1 Protein Homology CDS 248601 249047 . - 0 ID=cds-WP_016719233.1;Parent=gene-AL60_RS10755;Dbxref=GenBank:WP_016719233.1;Name=WP_016719233.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719233.1;locus_tag=AL60_RS10755;product=helix-turn-helix domain-containing protein;protein_id=WP_016719233.1;transl_table=11 NZ_KK316847.1 RefSeq gene 249269 249484 . + . ID=gene-AL60_RS10760;Name=AL60_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10760;old_locus_tag=AL60_01038 NZ_KK316847.1 Protein Homology CDS 249269 249484 . + 0 ID=cds-WP_003899674.1;Parent=gene-AL60_RS10760;Dbxref=GenBank:WP_003899674.1;Name=WP_003899674.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294640.1;locus_tag=AL60_RS10760;product=tyrosine-type recombinase/integrase;protein_id=WP_003899674.1;transl_table=11 NZ_KK316847.1 RefSeq gene 249523 249612 . - . ID=gene-AL60_RS10765;Name=AL60_RS10765;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS10765;old_locus_tag=AL60_01039 NZ_KK316847.1 tRNAscan-SE tRNA 249523 249612 . - . ID=rna-AL60_RS10765;Parent=gene-AL60_RS10765;anticodon=(pos:complement(249576..249578));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS10765;product=tRNA-Ser NZ_KK316847.1 tRNAscan-SE exon 249523 249612 . - . ID=exon-AL60_RS10765-1;Parent=rna-AL60_RS10765;anticodon=(pos:complement(249576..249578));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS10765;product=tRNA-Ser NZ_KK316847.1 RefSeq gene 249642 250100 . - . ID=gene-AL60_RS10770;Name=AL60_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10770;old_locus_tag=AL60_01040 NZ_KK316847.1 Protein Homology CDS 249642 250100 . - 0 ID=cds-WP_003420508.1;Parent=gene-AL60_RS10770;Dbxref=GenBank:WP_003420508.1;Name=WP_003420508.1;Ontology_term=GO:0009116,GO:0008270,GO:0019239;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,deaminase activity|0019239||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218269.1;locus_tag=AL60_RS10770;product=nucleoside deaminase;protein_id=WP_003420508.1;transl_table=11 NZ_KK316847.1 RefSeq gene 250116 250637 . - . ID=gene-AL60_RS10775;Name=AL60_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10775;old_locus_tag=AL60_01041 NZ_KK316847.1 Protein Homology CDS 250116 250637 . - 0 ID=cds-WP_003899676.1;Parent=gene-AL60_RS10775;Dbxref=GenBank:WP_003899676.1;Name=WP_003899676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899676.1;locus_tag=AL60_RS10775;product=tRNA adenosine deaminase-associated protein;protein_id=WP_003899676.1;transl_table=11 NZ_KK316847.1 RefSeq gene 250777 251721 . + . ID=gene-AL60_RS10780;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=AL60_RS10780;old_locus_tag=AL60_01042 NZ_KK316847.1 Protein Homology CDS 250777 251721 . + 0 ID=cds-WP_003912273.1;Parent=gene-AL60_RS10780;Dbxref=GenBank:WP_003912273.1;Name=WP_003912273.1;Ontology_term=GO:0006571,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351229.1;locus_tag=AL60_RS10780;product=prephenate dehydrogenase;protein_id=WP_003912273.1;transl_table=11 NZ_KK316847.1 RefSeq gene 251684 252283 . - . ID=gene-AL60_RS10785;Name=AL60_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10785;old_locus_tag=AL60_01043 NZ_KK316847.1 Protein Homology CDS 251684 252283 . - 0 ID=cds-WP_003420517.1;Parent=gene-AL60_RS10785;Dbxref=GenBank:WP_003420517.1;Name=WP_003420517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218272.1;locus_tag=AL60_RS10785;product=putative glycolipid-binding domain-containing protein;protein_id=WP_003420517.1;transl_table=11 NZ_KK316847.1 RefSeq gene 252289 253008 . - . ID=gene-AL60_RS10790;Name=proZ;gbkey=Gene;gene=proZ;gene_biotype=protein_coding;locus_tag=AL60_RS10790;old_locus_tag=AL60_01044 NZ_KK316847.1 Protein Homology CDS 252289 253008 . - 0 ID=cds-WP_003420520.1;Parent=gene-AL60_RS10790;Dbxref=GenBank:WP_003420520.1;Name=WP_003420520.1;gbkey=CDS;gene=proZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218273.1;locus_tag=AL60_RS10790;product=glycine betaine/carnitine/choline/L-proline ABC transporter permease ProZ;protein_id=WP_003420520.1;transl_table=11 NZ_KK316847.1 RefSeq gene 253005 253694 . - . ID=gene-AL60_RS10795;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=AL60_RS10795;old_locus_tag=AL60_01045 NZ_KK316847.1 Protein Homology CDS 253005 253694 . - 0 ID=cds-WP_003420526.1;Parent=gene-AL60_RS10795;Dbxref=GenBank:WP_003420526.1;Name=WP_003420526.1;gbkey=CDS;gene=proW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218274.1;locus_tag=AL60_RS10795;product=glycine betaine/carnitine/choline/L-proline ABC transporter permease ProW;protein_id=WP_003420526.1;transl_table=11 NZ_KK316847.1 RefSeq gene 253682 254812 . - . ID=gene-AL60_RS10800;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=AL60_RS10800;old_locus_tag=AL60_01046 NZ_KK316847.1 Protein Homology CDS 253682 254812 . - 0 ID=cds-WP_003420529.1;Parent=gene-AL60_RS10800;Dbxref=GenBank:WP_003420529.1;Name=WP_003420529.1;gbkey=CDS;gene=proV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218275.1;locus_tag=AL60_RS10800;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_003420529.1;transl_table=11 NZ_KK316847.1 RefSeq gene 254821 255768 . - . ID=gene-AL60_RS10805;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=AL60_RS10805;old_locus_tag=AL60_01047 NZ_KK316847.1 Protein Homology CDS 254821 255768 . - 0 ID=cds-WP_003907122.1;Parent=gene-AL60_RS10805;Dbxref=GenBank:WP_003907122.1;Name=WP_003907122.1;gbkey=CDS;gene=proX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218276.1;locus_tag=AL60_RS10805;product=glycine betaine/carnitine/choline/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_003907122.1;transl_table=11 NZ_KK316847.1 RefSeq gene 255882 256235 . + . ID=gene-AL60_RS10810;Name=AL60_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10810;old_locus_tag=AL60_01048 NZ_KK316847.1 Protein Homology CDS 255882 256235 . + 0 ID=cds-WP_003899680.1;Parent=gene-AL60_RS10810;Dbxref=GenBank:WP_003899680.1;Name=WP_003899680.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899680.1;locus_tag=AL60_RS10810;product=LapA family protein;protein_id=WP_003899680.1;transl_table=11 NZ_KK316847.1 RefSeq gene 256257 257312 . - . ID=gene-AL60_RS10815;Name=AL60_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10815;old_locus_tag=AL60_01049 NZ_KK316847.1 Protein Homology CDS 256257 257312 . - 0 ID=cds-WP_003420539.1;Parent=gene-AL60_RS10815;Dbxref=GenBank:WP_003420539.1;Name=WP_003420539.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218278.1;locus_tag=AL60_RS10815;product=phosphotransferase family protein;protein_id=WP_003420539.1;transl_table=11 NZ_KK316847.1 RefSeq gene 257391 259271 . - . ID=gene-AL60_RS10820;Name=AL60_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10820;old_locus_tag=AL60_01050 NZ_KK316847.1 Protein Homology CDS 257391 259271 . - 0 ID=cds-WP_003900750.1;Parent=gene-AL60_RS10820;Dbxref=GenBank:WP_003900750.1;Name=WP_003900750.1;Ontology_term=GO:0008484,GO:0046872,GO:0046983;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218279.1;locus_tag=AL60_RS10820;product=alkyl/aryl-sulfatase;protein_id=WP_003900750.1;transl_table=11 NZ_KK316847.1 RefSeq gene 259442 259921 . + . ID=gene-AL60_RS10825;Name=lpqH;gbkey=Gene;gene=lpqH;gene_biotype=protein_coding;locus_tag=AL60_RS10825;old_locus_tag=AL60_01051 NZ_KK316847.1 Protein Homology CDS 259442 259921 . + 0 ID=cds-WP_003420544.1;Parent=gene-AL60_RS10825;Dbxref=GenBank:WP_003420544.1;Name=WP_003420544.1;gbkey=CDS;gene=lpqH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218280.1;locus_tag=AL60_RS10825;product=lipoprotein LpqH;protein_id=WP_003420544.1;transl_table=11 NZ_KK316847.1 RefSeq gene 259977 261497 . - . ID=gene-AL60_RS10830;Name=tcrY;gbkey=Gene;gene=tcrY;gene_biotype=protein_coding;locus_tag=AL60_RS10830;old_locus_tag=AL60_01052 NZ_KK316847.1 Protein Homology CDS 259977 261497 . - 0 ID=cds-WP_003899682.1;Parent=gene-AL60_RS10830;Dbxref=GenBank:WP_003899682.1;Name=WP_003899682.1;gbkey=CDS;gene=tcrY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899682.1;locus_tag=AL60_RS10830;product=two-component system sensor histidine kinase TcrY;protein_id=WP_003899682.1;transl_table=11 NZ_KK316847.1 RefSeq gene 261475 262179 . - . ID=gene-AL60_RS10835;Name=tcrX;gbkey=Gene;gene=tcrX;gene_biotype=protein_coding;locus_tag=AL60_RS10835;old_locus_tag=AL60_01053 NZ_KK316847.1 Protein Homology CDS 261475 262179 . - 0 ID=cds-WP_003420552.1;Parent=gene-AL60_RS10835;Dbxref=GenBank:WP_003420552.1;Name=WP_003420552.1;gbkey=CDS;gene=tcrX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218282.1;locus_tag=AL60_RS10835;product=two-component system response regulator TcrX;protein_id=WP_003420552.1;transl_table=11 NZ_KK316847.1 RefSeq gene 262553 263377 . + . ID=gene-AL60_RS10840;Name=AL60_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10840;old_locus_tag=AL60_01054 NZ_KK316847.1 Protein Homology CDS 262553 263377 . + 0 ID=cds-WP_003912342.1;Parent=gene-AL60_RS10840;Dbxref=GenBank:WP_003912342.1;Name=WP_003912342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912342.1;locus_tag=AL60_RS10840;product=glycoside hydrolase family 25 domain-containing protein;protein_id=WP_003912342.1;transl_table=11 NZ_KK316847.1 RefSeq gene 263391 264335 . - . ID=gene-AL60_RS10845;Name=AL60_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10845;old_locus_tag=AL60_01055 NZ_KK316847.1 Protein Homology CDS 263391 264335 . - 0 ID=cds-WP_003420557.1;Parent=gene-AL60_RS10845;Dbxref=GenBank:WP_003420557.1;Name=WP_003420557.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218284.1;locus_tag=AL60_RS10845;product=class I SAM-dependent methyltransferase;protein_id=WP_003420557.1;transl_table=11 NZ_KK316847.1 RefSeq gene 264465 264824 . + . ID=gene-AL60_RS10850;Name=AL60_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10850;old_locus_tag=AL60_01056 NZ_KK316847.1 Protein Homology CDS 264465 264824 . + 0 ID=cds-WP_003420560.1;Parent=gene-AL60_RS10850;Dbxref=GenBank:WP_003420560.1;Name=WP_003420560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218285.1;locus_tag=AL60_RS10850;product=nuclear transport factor 2 family protein;protein_id=WP_003420560.1;transl_table=11 NZ_KK316847.1 RefSeq gene 265010 265282 . + . ID=gene-AL60_RS10855;Name=AL60_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10855;old_locus_tag=AL60_01057 NZ_KK316847.1 Protein Homology CDS 265010 265282 . + 0 ID=cds-WP_003420563.1;Parent=gene-AL60_RS10855;Dbxref=GenBank:WP_003420563.1;Name=WP_003420563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218286.1;locus_tag=AL60_RS10855;product=hypothetical protein;protein_id=WP_003420563.1;transl_table=11 NZ_KK316847.1 RefSeq gene 265595 266170 . - . ID=gene-AL60_RS10860;Name=AL60_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10860;old_locus_tag=AL60_01058 NZ_KK316847.1 Protein Homology CDS 265595 266170 . - 0 ID=cds-WP_003899685.1;Parent=gene-AL60_RS10860;Dbxref=GenBank:WP_003899685.1;Name=WP_003899685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218287.1;locus_tag=AL60_RS10860;product=hypothetical protein;protein_id=WP_003899685.1;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 266315 266690 . - . ID=gene-AL60_RS25675;Name=AL60_RS25675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS25675;partial=true;pseudo=true;start_range=.,266315 NZ_KK316847.1 Protein Homology CDS 266315 266690 . - 0 ID=cds-AL60_RS25675;Parent=gene-AL60_RS25675;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217328.1;locus_tag=AL60_RS25675;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,266315;transl_table=11 NZ_KK316847.1 RefSeq gene 266799 267125 . - . ID=gene-AL60_RS10875;Name=AL60_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10875;old_locus_tag=AL60_01061 NZ_KK316847.1 Protein Homology CDS 266799 267125 . - 0 ID=cds-WP_003420573.1;Parent=gene-AL60_RS10875;Dbxref=GenBank:WP_003420573.1;Name=WP_003420573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218288.1;locus_tag=AL60_RS10875;product=hypothetical protein;protein_id=WP_003420573.1;transl_table=11 NZ_KK316847.1 RefSeq gene 267260 267332 . - . ID=gene-AL60_RS10880;Name=AL60_RS10880;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS10880;old_locus_tag=AL60_01062 NZ_KK316847.1 tRNAscan-SE tRNA 267260 267332 . - . ID=rna-AL60_RS10880;Parent=gene-AL60_RS10880;anticodon=(pos:complement(267297..267299));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS10880;product=tRNA-Arg NZ_KK316847.1 tRNAscan-SE exon 267260 267332 . - . ID=exon-AL60_RS10880-1;Parent=rna-AL60_RS10880;anticodon=(pos:complement(267297..267299));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS10880;product=tRNA-Arg NZ_KK316847.1 RefSeq gene 267363 267451 . - . ID=gene-AL60_RS10885;Name=AL60_RS10885;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS10885;old_locus_tag=AL60_01063 NZ_KK316847.1 tRNAscan-SE tRNA 267363 267451 . - . ID=rna-AL60_RS10885;Parent=gene-AL60_RS10885;anticodon=(pos:complement(267415..267417));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS10885;product=tRNA-Ser NZ_KK316847.1 tRNAscan-SE exon 267363 267451 . - . ID=exon-AL60_RS10885-1;Parent=rna-AL60_RS10885;anticodon=(pos:complement(267415..267417));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS10885;product=tRNA-Ser NZ_KK316847.1 RefSeq gene 267529 268590 . + . ID=gene-AL60_RS10890;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=AL60_RS10890;old_locus_tag=AL60_01064 NZ_KK316847.1 Protein Homology CDS 267529 268590 . + 0 ID=cds-WP_003899686.1;Parent=gene-AL60_RS10890;Dbxref=GenBank:WP_003899686.1;Name=WP_003899686.1;gbkey=CDS;gene=hisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218289.1;locus_tag=AL60_RS10890;product=histidinol-phosphate transaminase;protein_id=WP_003899686.1;transl_table=11 NZ_KK316847.1 RefSeq gene 268636 269220 . - . ID=gene-AL60_RS10895;Name=AL60_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10895;old_locus_tag=AL60_01065 NZ_KK316847.1 Protein Homology CDS 268636 269220 . - 0 ID=cds-WP_003420580.1;Parent=gene-AL60_RS10895;Dbxref=GenBank:WP_003420580.1;Name=WP_003420580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218290.1;locus_tag=AL60_RS10895;product=TIGR03086 family metal-binding protein;protein_id=WP_003420580.1;transl_table=11 NZ_KK316847.1 RefSeq gene 269244 270068 . + . ID=gene-AL60_RS10900;Name=AL60_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10900;old_locus_tag=AL60_01066 NZ_KK316847.1 Protein Homology CDS 269244 270068 . + 0 ID=cds-WP_003420587.1;Parent=gene-AL60_RS10900;Dbxref=GenBank:WP_003420587.1;Name=WP_003420587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218291.1;locus_tag=AL60_RS10900;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003420587.1;transl_table=11 NZ_KK316847.1 RefSeq gene 270080 271327 . + . ID=gene-AL60_RS10905;Name=lipE;gbkey=Gene;gene=lipE;gene_biotype=protein_coding;locus_tag=AL60_RS10905;old_locus_tag=AL60_01067 NZ_KK316847.1 Protein Homology CDS 270080 271327 . + 0 ID=cds-WP_003907124.1;Parent=gene-AL60_RS10905;Dbxref=GenBank:WP_003907124.1;Name=WP_003907124.1;gbkey=CDS;gene=lipE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218292.1;locus_tag=AL60_RS10905;product=lipase LipE;protein_id=WP_003907124.1;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 271484 272488 . + . ID=gene-AL60_RS25680;Name=AL60_RS25680;end_range=272488,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS25680;old_locus_tag=AL60_01068;partial=true;pseudo=true NZ_KK316847.1 Protein Homology CDS 271484 272488 . + 0 ID=cds-AL60_RS25680;Parent=gene-AL60_RS25680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=272488,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014741.6;locus_tag=AL60_RS25680;partial=true;product=DUF222 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316847.1 RefSeq gene 272976 273062 . - . ID=gene-AL60_RS10910;Name=AL60_RS10910;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS10910;old_locus_tag=AL60_01069 NZ_KK316847.1 tRNAscan-SE tRNA 272976 273062 . - . ID=rna-AL60_RS10910;Parent=gene-AL60_RS10910;anticodon=(pos:complement(273026..273028));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS10910;product=tRNA-Ser NZ_KK316847.1 tRNAscan-SE exon 272976 273062 . - . ID=exon-AL60_RS10910-1;Parent=rna-AL60_RS10910;anticodon=(pos:complement(273026..273028));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS10910;product=tRNA-Ser NZ_KK316847.1 RefSeq gene 273098 274075 . + . ID=gene-AL60_RS10915;Name=AL60_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10915;old_locus_tag=AL60_01070 NZ_KK316847.1 Protein Homology CDS 273098 274075 . + 0 ID=cds-WP_015695598.1;Parent=gene-AL60_RS10915;Dbxref=GenBank:WP_015695598.1;Name=WP_015695598.1;Ontology_term=GO:0003960,GO:0048038,GO:0070402;gbkey=CDS;go_function=NADPH:quinone reductase activity|0003960||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917958.1;locus_tag=AL60_RS10915;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_015695598.1;transl_table=11 NZ_KK316847.1 RefSeq gene 274094 275290 . - . ID=gene-AL60_RS10920;Name=AL60_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10920;old_locus_tag=AL60_01071 NZ_KK316847.1 Protein Homology CDS 274094 275290 . - 0 ID=cds-WP_003420595.1;Parent=gene-AL60_RS10920;Dbxref=GenBank:WP_003420595.1;Name=WP_003420595.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218295.1;locus_tag=AL60_RS10920;product=cysteine desulfurase-like protein;protein_id=WP_003420595.1;transl_table=11 NZ_KK316847.1 RefSeq gene 275380 277380 . + . ID=gene-AL60_RS10925;Name=AL60_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10925;old_locus_tag=AL60_01072 NZ_KK316847.1 Protein Homology CDS 275380 277380 . + 0 ID=cds-WP_003420597.1;Parent=gene-AL60_RS10925;Dbxref=GenBank:WP_003420597.1;Name=WP_003420597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218296.1;locus_tag=AL60_RS10925;product=DUF6541 family protein;protein_id=WP_003420597.1;transl_table=11 NZ_KK316847.1 RefSeq gene 277384 277920 . + . ID=gene-AL60_RS10930;Name=bpa;gbkey=Gene;gene=bpa;gene_biotype=protein_coding;locus_tag=AL60_RS10930;old_locus_tag=AL60_01073 NZ_KK316847.1 Protein Homology CDS 277384 277920 . + 0 ID=cds-WP_003899690.1;Parent=gene-AL60_RS10930;Dbxref=GenBank:WP_003899690.1;Name=WP_003899690.1;gbkey=CDS;gene=bpa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218297.1;locus_tag=AL60_RS10930;product=proteasome activator protein Bpa;protein_id=WP_003899690.1;transl_table=11 NZ_KK316847.1 RefSeq gene 277924 278745 . + . ID=gene-AL60_RS10935;Name=wzt;gbkey=Gene;gene=wzt;gene_biotype=protein_coding;gene_synonym=rfbE;locus_tag=AL60_RS10935;old_locus_tag=AL60_01074 NZ_KK316847.1 Protein Homology CDS 277924 278745 . + 0 ID=cds-WP_003420603.1;Parent=gene-AL60_RS10935;Dbxref=GenBank:WP_003420603.1;Name=WP_003420603.1;gbkey=CDS;gene=wzt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218298.1;locus_tag=AL60_RS10935;product=galactan export ABC transporter ATP-binding subunit Wzt/RfbE;protein_id=WP_003420603.1;transl_table=11 NZ_KK316847.1 RefSeq gene 278742 279656 . + . ID=gene-AL60_RS10940;Name=glfT1;gbkey=Gene;gene=glfT1;gene_biotype=protein_coding;locus_tag=AL60_RS10940;old_locus_tag=AL60_01075 NZ_KK316847.1 Protein Homology CDS 278742 279656 . + 0 ID=cds-WP_003420606.1;Parent=gene-AL60_RS10940;Dbxref=GenBank:WP_003420606.1;Name=WP_003420606.1;gbkey=CDS;gene=glfT1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178014.1;locus_tag=AL60_RS10940;product=galactofuranosyltransferase GlfT1;protein_id=WP_003420606.1;transl_table=11 NZ_KK316847.1 RefSeq gene 279653 280495 . + . ID=gene-AL60_RS10945;Name=wzm;gbkey=Gene;gene=wzm;gene_biotype=protein_coding;gene_synonym=rfbD;locus_tag=AL60_RS10945;old_locus_tag=AL60_01076 NZ_KK316847.1 Protein Homology CDS 279653 280495 . + 0 ID=cds-WP_003420610.1;Parent=gene-AL60_RS10945;Dbxref=GenBank:WP_003420610.1;Name=WP_003420610.1;gbkey=CDS;gene=wzm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218300.1;locus_tag=AL60_RS10945;product=galactan export ABC transporter permease subunit Wzm/RfbD;protein_id=WP_003420610.1;transl_table=11 NZ_KK316847.1 RefSeq gene 280651 281631 . + . ID=gene-AL60_RS10950;Name=AL60_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10950;old_locus_tag=AL60_01077 NZ_KK316847.1 Protein Homology CDS 280651 281631 . + 0 ID=cds-WP_003420612.1;Parent=gene-AL60_RS10950;Dbxref=GenBank:WP_003420612.1;Name=WP_003420612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178015.1;locus_tag=AL60_RS10950;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003420612.1;transl_table=11 NZ_KK316847.1 RefSeq gene 281715 282788 . + . ID=gene-AL60_RS10955;Name=AL60_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10955;old_locus_tag=AL60_01078 NZ_KK316847.1 Protein Homology CDS 281715 282788 . + 0 ID=cds-WP_003420615.1;Parent=gene-AL60_RS10955;Dbxref=GenBank:WP_003420615.1;Name=WP_003420615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218302.1;locus_tag=AL60_RS10955;product=hypothetical protein;protein_id=WP_003420615.1;transl_table=11 NZ_KK316847.1 RefSeq gene 282769 283992 . - . ID=gene-AL60_RS10960;Name=AL60_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10960;old_locus_tag=AL60_01079 NZ_KK316847.1 Protein Homology CDS 282769 283992 . - 0 ID=cds-WP_003907126.1;Parent=gene-AL60_RS10960;Dbxref=GenBank:WP_003907126.1;Name=WP_003907126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218303.1;locus_tag=AL60_RS10960;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_003907126.1;transl_table=11 NZ_KK316847.1 RefSeq gene 284005 284931 . - . ID=gene-AL60_RS10965;Name=AL60_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10965;old_locus_tag=AL60_01080 NZ_KK316847.1 Protein Homology CDS 284005 284931 . - 0 ID=cds-WP_003420620.1;Parent=gene-AL60_RS10965;Dbxref=GenBank:WP_003420620.1;Name=WP_003420620.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218304.1;locus_tag=AL60_RS10965;product=SAM-dependent methyltransferase;protein_id=WP_003420620.1;transl_table=11 NZ_KK316847.1 RefSeq gene 285175 285660 . + . ID=gene-AL60_RS10970;Name=AL60_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10970;old_locus_tag=AL60_01081 NZ_KK316847.1 Protein Homology CDS 285175 285660 . + 0 ID=cds-WP_003420624.1;Parent=gene-AL60_RS10970;Dbxref=GenBank:WP_003420624.1;Name=WP_003420624.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218305.1;locus_tag=AL60_RS10970;product=GreA/GreB family elongation factor;protein_id=WP_003420624.1;transl_table=11 NZ_KK316847.1 RefSeq gene 285769 286134 . + . ID=gene-AL60_RS10975;Name=AL60_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10975;old_locus_tag=AL60_01082 NZ_KK316847.1 Protein Homology CDS 285769 286134 . + 0 ID=cds-WP_003420627.1;Parent=gene-AL60_RS10975;Dbxref=GenBank:WP_003420627.1;Name=WP_003420627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218306.1;locus_tag=AL60_RS10975;product=arabinogalactan biosynthesis protein;protein_id=WP_003420627.1;transl_table=11 NZ_KK316847.1 RefSeq gene 286174 287559 . + . ID=gene-AL60_RS10980;Name=dprE1;gbkey=Gene;gene=dprE1;gene_biotype=protein_coding;locus_tag=AL60_RS10980;old_locus_tag=AL60_01083 NZ_KK316847.1 Protein Homology CDS 286174 287559 . + 0 ID=cds-WP_003420630.1;Parent=gene-AL60_RS10980;Dbxref=GenBank:WP_003420630.1;Name=WP_003420630.1;gbkey=CDS;gene=dprE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218307.1;locus_tag=AL60_RS10980;product=decaprenylphospho-beta-D-ribofuranose 2-dehydrogenase DprE1;protein_id=WP_003420630.1;transl_table=11 NZ_KK316847.1 RefSeq gene 287560 288324 . + . ID=gene-AL60_RS10985;Name=AL60_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS10985;old_locus_tag=AL60_01084 NZ_KK316847.1 Protein Homology CDS 287560 288324 . + 0 ID=cds-WP_003420632.1;Parent=gene-AL60_RS10985;Dbxref=GenBank:WP_003420632.1;Name=WP_003420632.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420632.1;locus_tag=AL60_RS10985;product=decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase;protein_id=WP_003420632.1;transl_table=11 NZ_KK316847.1 RefSeq gene 288327 290258 . + . ID=gene-AL60_RS10990;Name=aftA;gbkey=Gene;gene=aftA;gene_biotype=protein_coding;locus_tag=AL60_RS10990;old_locus_tag=AL60_01085 NZ_KK316847.1 Protein Homology CDS 288327 290258 . + 0 ID=cds-WP_003899694.1;Parent=gene-AL60_RS10990;Dbxref=GenBank:WP_003899694.1;Name=WP_003899694.1;gbkey=CDS;gene=aftA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218309.1;locus_tag=AL60_RS10990;product=galactan 5-O-arabinofuranosyltransferase;protein_id=WP_003899694.1;transl_table=11 NZ_KK316847.1 RefSeq gene 290258 293542 . + . ID=gene-AL60_RS10995;Name=embC;gbkey=Gene;gene=embC;gene_biotype=protein_coding;locus_tag=AL60_RS10995;old_locus_tag=AL60_01086 NZ_KK316847.1 Protein Homology CDS 290258 293542 . + 0 ID=cds-WP_003901726.1;Parent=gene-AL60_RS10995;Dbxref=GenBank:WP_003901726.1;Name=WP_003901726.1;gbkey=CDS;gene=embC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218310.1;locus_tag=AL60_RS10995;product=arabinosyltransferase EmbC;protein_id=WP_003901726.1;transl_table=11 NZ_KK316847.1 RefSeq gene 293628 296912 . + . ID=gene-AL60_RS11000;Name=embA;gbkey=Gene;gene=embA;gene_biotype=protein_coding;locus_tag=AL60_RS11000;old_locus_tag=AL60_01087 NZ_KK316847.1 Protein Homology CDS 293628 296912 . + 0 ID=cds-WP_003899696.1;Parent=gene-AL60_RS11000;Dbxref=GenBank:WP_003899696.1;Name=WP_003899696.1;gbkey=CDS;gene=embA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218311.1;locus_tag=AL60_RS11000;product=arabinosyltransferase EmbA;protein_id=WP_003899696.1;transl_table=11 NZ_KK316847.1 RefSeq gene 296909 300205 . + . ID=gene-AL60_RS11005;Name=embB;gbkey=Gene;gene=embB;gene_biotype=protein_coding;locus_tag=AL60_RS11005;old_locus_tag=AL60_01088 NZ_KK316847.1 Protein Homology CDS 296909 300205 . + 0 ID=cds-WP_003901728.1;Parent=gene-AL60_RS11005;Dbxref=GenBank:WP_003901728.1;Name=WP_003901728.1;gbkey=CDS;gene=embB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218312.1;locus_tag=AL60_RS11005;product=arabinosyltransferase EmbB;protein_id=WP_003901728.1;transl_table=11 NZ_KK316847.1 RefSeq gene 300273 301400 . + . ID=gene-AL60_RS11010;Name=AL60_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11010;old_locus_tag=AL60_01089 NZ_KK316847.1 Protein Homology CDS 300273 301400 . + 0 ID=cds-WP_003420646.1;Parent=gene-AL60_RS11010;Dbxref=GenBank:WP_003420646.1;Name=WP_003420646.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178016.1;locus_tag=AL60_RS11010;product=MBL fold metallo-hydrolase;protein_id=WP_003420646.1;transl_table=11 NZ_KK316847.1 RefSeq gene 301480 303261 . + . ID=gene-AL60_RS11015;Name=AL60_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11015;old_locus_tag=AL60_01090 NZ_KK316847.1 Protein Homology CDS 301480 303261 . + 0 ID=cds-WP_003900757.1;Parent=gene-AL60_RS11015;Dbxref=GenBank:WP_003900757.1;Name=WP_003900757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218314.1;locus_tag=AL60_RS11015;product=DNA alkylation response protein;protein_id=WP_003900757.1;transl_table=11 NZ_KK316847.1 RefSeq gene 303388 304722 . + . ID=gene-AL60_RS11020;Name=AL60_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11020;old_locus_tag=AL60_01091 NZ_KK316847.1 Protein Homology CDS 303388 304722 . + 0 ID=cds-WP_003900758.1;Parent=gene-AL60_RS11020;Dbxref=GenBank:WP_003900758.1;Name=WP_003900758.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215829.1;locus_tag=AL60_RS11020;product=ISL3-like element IS1557 family transposase;protein_id=WP_003900758.1;transl_table=11 NZ_KK316847.1 RefSeq gene 304775 306343 . - . ID=gene-AL60_RS11025;Name=AL60_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11025;old_locus_tag=AL60_01092 NZ_KK316847.1 Protein Homology CDS 304775 306343 . - 0 ID=cds-WP_003420767.1;Parent=gene-AL60_RS11025;Dbxref=GenBank:WP_003420767.1;Name=WP_003420767.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218316.2;locus_tag=AL60_RS11025;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003420767.1;transl_table=11 NZ_KK316847.1 RefSeq gene 306340 311541 . - . ID=gene-AL60_RS11030;Name=pks13;gbkey=Gene;gene=pks13;gene_biotype=protein_coding;locus_tag=AL60_RS11030;old_locus_tag=AL60_01093 NZ_KK316847.1 Protein Homology CDS 306340 311541 . - 0 ID=cds-WP_003902557.1;Parent=gene-AL60_RS11030;Dbxref=GenBank:WP_003902557.1;Name=WP_003902557.1;gbkey=CDS;gene=pks13;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218317.1;locus_tag=AL60_RS11030;product=polyketide synthase Pks13;protein_id=WP_003902557.1;transl_table=11 NZ_KK316847.1 RefSeq gene 311548 313437 . - . ID=gene-AL60_RS11035;Name=fadD32;gbkey=Gene;gene=fadD32;gene_biotype=protein_coding;locus_tag=AL60_RS11035;old_locus_tag=AL60_01094 NZ_KK316847.1 Protein Homology CDS 311548 313437 . - 0 ID=cds-WP_003912356.1;Parent=gene-AL60_RS11035;Dbxref=GenBank:WP_003912356.1;Name=WP_003912356.1;gbkey=CDS;gene=fadD32;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912356.1;locus_tag=AL60_RS11035;product=long-chain-fatty-acid--AMP ligase FadD32;protein_id=WP_003912356.1;transl_table=11 NZ_KK316847.1 RefSeq gene 313750 314760 . - . ID=gene-AL60_RS11040;Name=AL60_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11040;old_locus_tag=AL60_01095 NZ_KK316847.1 Protein Homology CDS 313750 314760 . - 0 ID=cds-WP_009938140.1;Parent=gene-AL60_RS11040;Dbxref=GenBank:WP_009938140.1;Name=WP_009938140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218319.1;locus_tag=AL60_RS11040;product=phospholipase;protein_id=WP_009938140.1;transl_table=11 NZ_KK316847.1 RefSeq gene 314958 315857 . - . ID=gene-AL60_RS11045;Name=fbpD;gbkey=Gene;gene=fbpD;gene_biotype=protein_coding;locus_tag=AL60_RS11045;old_locus_tag=AL60_01096 NZ_KK316847.1 Protein Homology CDS 314958 315857 . - 0 ID=cds-WP_003420783.1;Parent=gene-AL60_RS11045;Dbxref=GenBank:WP_003420783.1;Name=WP_003420783.1;Ontology_term=GO:0016787;gbkey=CDS;gene=fbpD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178017.1;locus_tag=AL60_RS11045;product=esterase family protein;protein_id=WP_003420783.1;transl_table=11 NZ_KK316847.1 RefSeq gene 316037 317053 . - . ID=gene-AL60_RS11050;Name=ag85A;gbkey=Gene;gene=ag85A;gene_biotype=protein_coding;gene_synonym=fbpA;locus_tag=AL60_RS11050;old_locus_tag=AL60_01097 NZ_KK316847.1 Protein Homology CDS 316037 317053 . - 0 ID=cds-WP_003900759.1;Parent=gene-AL60_RS11050;Dbxref=GenBank:WP_003900759.1;Name=WP_003900759.1;gbkey=CDS;gene=ag85A;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218321.1;locus_tag=AL60_RS11050;product=diacylglycerol acyltransferase/mycolyltransferase Ag85A;protein_id=WP_003900759.1;transl_table=11 NZ_KK316847.1 RefSeq gene 317348 319345 . - . ID=gene-AL60_RS11055;Name=aftB;gbkey=Gene;gene=aftB;gene_biotype=protein_coding;locus_tag=AL60_RS11055;old_locus_tag=AL60_01098 NZ_KK316847.1 Protein Homology CDS 317348 319345 . - 0 ID=cds-WP_009936680.1;Parent=gene-AL60_RS11055;Dbxref=GenBank:WP_009936680.1;Name=WP_009936680.1;gbkey=CDS;gene=aftB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936680.1;locus_tag=AL60_RS11055;product=terminal beta-(1->2)-arabinofuranosyltransferase;protein_id=WP_009936680.1;transl_table=11 NZ_KK316847.1 RefSeq gene 319320 320228 . - . ID=gene-AL60_RS11060;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AL60_RS11060;old_locus_tag=AL60_01099 NZ_KK316847.1 Protein Homology CDS 319320 320228 . - 0 ID=cds-WP_003899704.1;Parent=gene-AL60_RS11060;Dbxref=GenBank:WP_003899704.1;Name=WP_003899704.1;gbkey=CDS;gene=ubiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218323.1;locus_tag=AL60_RS11060;product=decaprenyl-phosphate phosphoribosyltransferase;protein_id=WP_003899704.1;transl_table=11 NZ_KK316847.1 RefSeq gene 320235 320768 . - . ID=gene-AL60_RS11065;Name=AL60_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11065;old_locus_tag=AL60_01100 NZ_KK316847.1 Protein Homology CDS 320235 320768 . - 0 ID=cds-WP_003899705.1;Parent=gene-AL60_RS11065;Dbxref=GenBank:WP_003899705.1;Name=WP_003899705.1;Ontology_term=GO:0008610,GO:0046839,GO:0042577;gbkey=CDS;go_function=lipid phosphatase activity|0042577||IEA;go_process=lipid biosynthetic process|0008610||IEA,phospholipid dephosphorylation|0046839||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899705.1;locus_tag=AL60_RS11065;product=phosphatase PAP2 family protein;protein_id=WP_003899705.1;transl_table=11 NZ_KK316847.1 RefSeq gene 320761 322674 . - . ID=gene-AL60_RS11070;Name=glfT2;gbkey=Gene;gene=glfT2;gene_biotype=protein_coding;locus_tag=AL60_RS11070;old_locus_tag=AL60_01101 NZ_KK316847.1 Protein Homology CDS 320761 322674 . - 0 ID=cds-WP_003900761.1;Parent=gene-AL60_RS11070;Dbxref=GenBank:WP_003900761.1;Name=WP_003900761.1;gbkey=CDS;gene=glfT2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218325.1;locus_tag=AL60_RS11070;product=galactofuranosyl transferase GlfT2;protein_id=WP_003900761.1;transl_table=11 NZ_KK316847.1 RefSeq gene 322671 323870 . - . ID=gene-AL60_RS11075;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=AL60_RS11075;old_locus_tag=AL60_01102 NZ_KK316847.1 Protein Homology CDS 322671 323870 . - 0 ID=cds-WP_003420798.1;Parent=gene-AL60_RS11075;Dbxref=GenBank:WP_003420798.1;Name=WP_003420798.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218326.1;locus_tag=AL60_RS11075;product=UDP-galactopyranose mutase;protein_id=WP_003420798.1;transl_table=11 NZ_KK316847.1 RefSeq gene 324134 324988 . + . ID=gene-AL60_RS11080;Name=pirG;gbkey=Gene;gene=pirG;gene_biotype=protein_coding;locus_tag=AL60_RS11080;old_locus_tag=AL60_01103 NZ_KK316847.1 Protein Homology CDS 324134 324988 . + 0 ID=cds-WP_003420801.1;Parent=gene-AL60_RS11080;Dbxref=GenBank:WP_003420801.1;Name=WP_003420801.1;gbkey=CDS;gene=pirG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218327.1;locus_tag=AL60_RS11080;product=exported repetitive protein;protein_id=WP_003420801.1;transl_table=11 NZ_KK316847.1 RefSeq gene 325151 326812 . + . ID=gene-AL60_RS11085;Name=AL60_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11085;old_locus_tag=AL60_01104 NZ_KK316847.1 Protein Homology CDS 325151 326812 . + 0 ID=cds-WP_003912357.1;Parent=gene-AL60_RS11085;Dbxref=GenBank:WP_003912357.1;Name=WP_003912357.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912357.1;locus_tag=AL60_RS11085;product=LGFP repeat-containing protein;protein_id=WP_003912357.1;transl_table=11 NZ_KK316847.1 RefSeq gene 326966 328480 . + . ID=gene-AL60_RS11090;Name=AL60_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11090;old_locus_tag=AL60_01105 NZ_KK316847.1 Protein Homology CDS 326966 328480 . + 0 ID=cds-WP_003420809.1;Parent=gene-AL60_RS11090;Dbxref=GenBank:WP_003420809.1;Name=WP_003420809.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178019.1;locus_tag=AL60_RS11090;product=PE family protein;protein_id=WP_003420809.1;transl_table=11 NZ_KK316847.1 RefSeq gene 328477 328629 . - . ID=gene-AL60_RS0104435;Name=AL60_RS0104435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104435 NZ_KK316847.1 Protein Homology CDS 328477 328629 . - 0 ID=cds-WP_003420812.1;Parent=gene-AL60_RS0104435;Dbxref=GenBank:WP_003420812.1;Name=WP_003420812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420812.1;locus_tag=AL60_RS0104435;product=PIN domain-containing protein;protein_id=WP_003420812.1;transl_table=11 NZ_KK316847.1 RefSeq gene 328789 329610 . - . ID=gene-AL60_RS11095;Name=AL60_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11095;old_locus_tag=AL60_01106 NZ_KK316847.1 Protein Homology CDS 328789 329610 . - 0 ID=cds-WP_003420817.1;Parent=gene-AL60_RS11095;Dbxref=GenBank:WP_003420817.1;Name=WP_003420817.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218330.1;locus_tag=AL60_RS11095;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_003420817.1;transl_table=11 NZ_KK316847.1 RefSeq gene 329625 330410 . - . ID=gene-AL60_RS11100;Name=AL60_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11100;old_locus_tag=AL60_01107 NZ_KK316847.1 Protein Homology CDS 329625 330410 . - 0 ID=cds-WP_003420820.1;Parent=gene-AL60_RS11100;Dbxref=GenBank:WP_003420820.1;Name=WP_003420820.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218331.1;locus_tag=AL60_RS11100;product=lysophospholipid acyltransferase family protein;protein_id=WP_003420820.1;transl_table=11 NZ_KK316847.1 RefSeq gene 330428 331183 . - . ID=gene-AL60_RS11105;Name=AL60_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11105;old_locus_tag=AL60_01108 NZ_KK316847.1 Protein Homology CDS 330428 331183 . - 0 ID=cds-WP_003420824.1;Parent=gene-AL60_RS11105;Dbxref=GenBank:WP_003420824.1;Name=WP_003420824.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218332.1;locus_tag=AL60_RS11105;product=lysophospholipid acyltransferase family protein;protein_id=WP_003420824.1;transl_table=11 NZ_KK316847.1 RefSeq gene 331187 331966 . - . ID=gene-AL60_RS11110;Name=AL60_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11110;old_locus_tag=AL60_01109 NZ_KK316847.1 Protein Homology CDS 331187 331966 . - 0 ID=cds-WP_003420827.1;Parent=gene-AL60_RS11110;Dbxref=GenBank:WP_003420827.1;Name=WP_003420827.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218333.1;locus_tag=AL60_RS11110;product=lysophospholipid acyltransferase family protein;protein_id=WP_003420827.1;transl_table=11 NZ_KK316847.1 RefSeq gene 332042 332797 . + . ID=gene-AL60_RS11115;Name=AL60_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11115;old_locus_tag=AL60_01110 NZ_KK316847.1 Protein Homology CDS 332042 332797 . + 0 ID=cds-WP_003420830.1;Parent=gene-AL60_RS11115;Dbxref=GenBank:WP_003420830.1;Name=WP_003420830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218334.1;locus_tag=AL60_RS11115;product=aminoglycoside 3'-phosphotransferase;protein_id=WP_003420830.1;transl_table=11 NZ_KK316847.1 RefSeq gene 332844 334394 . + . ID=gene-AL60_RS11120;Name=AL60_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11120;old_locus_tag=AL60_01111 NZ_KK316847.1 Protein Homology CDS 332844 334394 . + 0 ID=cds-WP_003420837.1;Parent=gene-AL60_RS11120;Dbxref=GenBank:WP_003420837.1;Name=WP_003420837.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218335.1;locus_tag=AL60_RS11120;product=MBL fold metallo-hydrolase;protein_id=WP_003420837.1;transl_table=11 NZ_KK316847.1 RefSeq gene 334391 334726 . + . ID=gene-AL60_RS11125;Name=AL60_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11125;old_locus_tag=AL60_01112 NZ_KK316847.1 Protein Homology CDS 334391 334726 . + 0 ID=cds-WP_003420840.1;Parent=gene-AL60_RS11125;Dbxref=GenBank:WP_003420840.1;Name=WP_003420840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218336.1;locus_tag=AL60_RS11125;product=hypothetical protein;protein_id=WP_003420840.1;transl_table=11 NZ_KK316847.1 RefSeq gene 334814 336220 . - . ID=gene-AL60_RS11130;Name=papA2;gbkey=Gene;gene=papA2;gene_biotype=protein_coding;locus_tag=AL60_RS11130;old_locus_tag=AL60_01113 NZ_KK316847.1 Protein Homology CDS 334814 336220 . - 0 ID=cds-WP_003899707.1;Parent=gene-AL60_RS11130;Dbxref=GenBank:WP_003899707.1;Name=WP_003899707.1;gbkey=CDS;gene=papA2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178020.1;locus_tag=AL60_RS11130;product=trehalose-2-sulfate acyltransferase;protein_id=WP_003899707.1;transl_table=11 NZ_KK316847.1 RefSeq gene 336368 337081 . + . ID=gene-AL60_RS11135;Name=sap;gbkey=Gene;gene=sap;gene_biotype=protein_coding;locus_tag=AL60_RS11135;old_locus_tag=AL60_01114 NZ_KK316847.1 Protein Homology CDS 336368 337081 . + 0 ID=cds-WP_003420848.1;Parent=gene-AL60_RS11135;Dbxref=GenBank:WP_003420848.1;Name=WP_003420848.1;gbkey=CDS;gene=sap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218338.1;locus_tag=AL60_RS11135;product=sulfolipid-1 biosynthesis transporter Sap;protein_id=WP_003420848.1;transl_table=11 NZ_KK316847.1 RefSeq gene 337116 338330 . + . ID=gene-AL60_RS11140;Name=chp1;gbkey=Gene;gene=chp1;gene_biotype=protein_coding;locus_tag=AL60_RS11140;old_locus_tag=AL60_01115 NZ_KK316847.1 Protein Homology CDS 337116 338330 . + 0 ID=cds-WP_003899709.1;Parent=gene-AL60_RS11140;Dbxref=GenBank:WP_003899709.1;Name=WP_003899709.1;gbkey=CDS;gene=chp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218339.1;locus_tag=AL60_RS11140;product=sulfolipid-1 biosynthesis membrane-anchored acyltransferase Chp1;protein_id=WP_003899709.1;transl_table=11 NZ_KK316847.1 RefSeq gene 338655 341924 . - . ID=gene-AL60_RS11145;Name=mmpL8;gbkey=Gene;gene=mmpL8;gene_biotype=protein_coding;locus_tag=AL60_RS11145;old_locus_tag=AL60_01116 NZ_KK316847.1 Protein Homology CDS 338655 341924 . - 0 ID=cds-WP_003899710.1;Parent=gene-AL60_RS11145;Dbxref=GenBank:WP_003899710.1;Name=WP_003899710.1;gbkey=CDS;gene=mmpL8;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218340.1;locus_tag=AL60_RS11145;product=sulfolipid-1 RND transporter MmpL8;protein_id=WP_003899710.1;transl_table=11 NZ_KK316847.1 RefSeq gene 342034 343569 . - . ID=gene-AL60_RS11150;Name=papA1;gbkey=Gene;gene=papA1;gene_biotype=protein_coding;locus_tag=AL60_RS11150;old_locus_tag=AL60_01117 NZ_KK316847.1 Protein Homology CDS 342034 343569 . - 0 ID=cds-WP_003907137.1;Parent=gene-AL60_RS11150;Dbxref=GenBank:WP_003907137.1;Name=WP_003907137.1;gbkey=CDS;gene=papA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218341.1;locus_tag=AL60_RS11150;product=acyltransferase PapA1;protein_id=WP_003907137.1;transl_table=11 NZ_KK316847.1 RefSeq gene 343620 350000 . - . ID=gene-AL60_RS11155;Name=pks2;gbkey=Gene;gene=pks2;gene_biotype=protein_coding;locus_tag=AL60_RS11155;old_locus_tag=AL60_01118 NZ_KK316847.1 Protein Homology CDS 343620 350000 . - 0 ID=cds-WP_012054382.1;Parent=gene-AL60_RS11155;Dbxref=GenBank:WP_012054382.1;Name=WP_012054382.1;gbkey=CDS;gene=pks2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218342.1;locus_tag=AL60_RS11155;product=phthioceranic/hydroxyphthioceranic acid synthase;protein_id=WP_012054382.1;transl_table=11 NZ_KK316847.1 RefSeq gene 350207 351961 . + . ID=gene-AL60_RS11160;Name=fadD23;gbkey=Gene;gene=fadD23;gene_biotype=protein_coding;locus_tag=AL60_RS11160;old_locus_tag=AL60_01119 NZ_KK316847.1 Protein Homology CDS 350207 351961 . + 0 ID=cds-WP_003899713.1;Parent=gene-AL60_RS11160;Dbxref=GenBank:WP_003899713.1;Name=WP_003899713.1;gbkey=CDS;gene=fadD23;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218343.1;locus_tag=AL60_RS11160;product=long-chain-fatty-acid--CoA ligase FadD23;protein_id=WP_003899713.1;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 351965 353181 . - . ID=gene-AL60_RS11165;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AL60_RS11165;old_locus_tag=AL60_01120;pseudo=true NZ_KK316847.1 Protein Homology CDS 351965 353181 . - 0 ID=cds-AL60_RS11165;Parent=gene-AL60_RS11165;Note=frameshifted;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217307.1;locus_tag=AL60_RS11165;product=IS607 family element RNA-guided endonuclease TnpB;pseudo=true;transl_table=11 NZ_KK316847.1 RefSeq gene 353181 353762 . - . ID=gene-AL60_RS11170;Name=AL60_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11170;old_locus_tag=AL60_01121 NZ_KK316847.1 Protein Homology CDS 353181 353762 . - 0 ID=cds-WP_003420870.1;Parent=gene-AL60_RS11170;Dbxref=GenBank:WP_003420870.1;Name=WP_003420870.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217308.1;locus_tag=AL60_RS11170;product=IS607-like element IS1537 family transposase;protein_id=WP_003420870.1;transl_table=11 NZ_KK316847.1 RefSeq gene 353793 355403 . - . ID=gene-AL60_RS11175;Name=AL60_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11175;old_locus_tag=AL60_01122 NZ_KK316847.1 Protein Homology CDS 353793 355403 . - 0 ID=cds-WP_003899716.1;Parent=gene-AL60_RS11175;Dbxref=GenBank:WP_003899716.1;Name=WP_003899716.1;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218346.1;locus_tag=AL60_RS11175;product=phytoene desaturase family protein;protein_id=WP_003899716.1;transl_table=11 NZ_KK316847.1 RefSeq gene 355451 356080 . - . ID=gene-AL60_RS11180;Name=AL60_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11180;old_locus_tag=AL60_01123 NZ_KK316847.1 Protein Homology CDS 355451 356080 . - 0 ID=cds-WP_003899717.1;Parent=gene-AL60_RS11180;Dbxref=GenBank:WP_003899717.1;Name=WP_003899717.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218347.1;locus_tag=AL60_RS11180;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899717.1;transl_table=11 NZ_KK316847.1 RefSeq gene 356152 356634 . + . ID=gene-AL60_RS11185;Name=AL60_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11185;old_locus_tag=AL60_01124 NZ_KK316847.1 Protein Homology CDS 356152 356634 . + 0 ID=cds-WP_003420879.1;Parent=gene-AL60_RS11185;Dbxref=GenBank:WP_003420879.1;Name=WP_003420879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218348.1;locus_tag=AL60_RS11185;product=DUF2834 domain-containing protein;protein_id=WP_003420879.1;transl_table=11 NZ_KK316847.1 RefSeq gene 356631 357206 . - . ID=gene-AL60_RS11190;Name=AL60_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11190;old_locus_tag=AL60_01125 NZ_KK316847.1 Protein Homology CDS 356631 357206 . - 0 ID=cds-WP_003420880.1;Parent=gene-AL60_RS11190;Dbxref=GenBank:WP_003420880.1;Name=WP_003420880.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218349.1;locus_tag=AL60_RS11190;product=class I SAM-dependent methyltransferase;protein_id=WP_003420880.1;transl_table=11 NZ_KK316847.1 RefSeq gene 357262 358053 . + . ID=gene-AL60_RS11195;Name=AL60_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11195;old_locus_tag=AL60_01126 NZ_KK316847.1 Protein Homology CDS 357262 358053 . + 0 ID=cds-WP_003420884.1;Parent=gene-AL60_RS11195;Dbxref=GenBank:WP_003420884.1;Name=WP_003420884.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218350.1;locus_tag=AL60_RS11195;product=AraC family transcriptional regulator;protein_id=WP_003420884.1;transl_table=11 NZ_KK316847.1 RefSeq gene 358050 359309 . - . ID=gene-AL60_RS11200;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AL60_RS11200;old_locus_tag=AL60_01127 NZ_KK316847.1 Protein Homology CDS 358050 359309 . - 0 ID=cds-WP_003420889.1;Parent=gene-AL60_RS11200;Dbxref=GenBank:WP_003420889.1;Name=WP_003420889.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218351.1;locus_tag=AL60_RS11200;product=serine--tRNA ligase;protein_id=WP_003420889.1;transl_table=11 NZ_KK316847.1 RefSeq gene 359442 360791 . + . ID=gene-AL60_RS11205;Name=AL60_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11205;old_locus_tag=AL60_01128 NZ_KK316847.1 Protein Homology CDS 359442 360791 . + 0 ID=cds-WP_003420892.1;Parent=gene-AL60_RS11205;Dbxref=GenBank:WP_003420892.1;Name=WP_003420892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218352.1;locus_tag=AL60_RS11205;product=septum formation family protein;protein_id=WP_003420892.1;transl_table=11 NZ_KK316847.1 RefSeq gene 360796 361209 . + . ID=gene-AL60_RS11210;Name=AL60_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11210;old_locus_tag=AL60_01129 NZ_KK316847.1 Protein Homology CDS 360796 361209 . + 0 ID=cds-WP_003899719.1;Parent=gene-AL60_RS11210;Dbxref=GenBank:WP_003899719.1;Name=WP_003899719.1;Ontology_term=GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218353.1;locus_tag=AL60_RS11210;product=metallopeptidase family protein;protein_id=WP_003899719.1;transl_table=11 NZ_KK316847.1 RefSeq gene 361206 361427 . + . ID=gene-AL60_RS25690;Name=AL60_RS25690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25690 NZ_KK316847.1 Protein Homology CDS 361206 361427 . + 0 ID=cds-WP_003912385.1;Parent=gene-AL60_RS25690;Dbxref=GenBank:WP_003912385.1;Name=WP_003912385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912385.1;locus_tag=AL60_RS25690;product=hypothetical protein;protein_id=WP_003912385.1;transl_table=11 NZ_KK316847.1 RefSeq gene 361404 362102 . - . ID=gene-AL60_RS11215;Name=AL60_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11215;old_locus_tag=AL60_01130 NZ_KK316847.1 Protein Homology CDS 361404 362102 . - 0 ID=cds-WP_003899720.1;Parent=gene-AL60_RS11215;Dbxref=GenBank:WP_003899720.1;Name=WP_003899720.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218354.1;locus_tag=AL60_RS11215;product=histidine phosphatase family protein;protein_id=WP_003899720.1;transl_table=11 NZ_KK316847.1 RefSeq gene 362099 363064 . - . ID=gene-AL60_RS11220;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AL60_RS11220;old_locus_tag=AL60_01131 NZ_KK316847.1 Protein Homology CDS 362099 363064 . - 0 ID=cds-WP_003420906.1;Parent=gene-AL60_RS11220;Dbxref=GenBank:WP_003420906.1;Name=WP_003420906.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218355.1;locus_tag=AL60_RS11220;product=prephenate dehydratase;protein_id=WP_003420906.1;transl_table=11 NZ_KK316847.1 RefSeq gene 363160 363936 . + . ID=gene-AL60_RS11225;Name=AL60_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11225;old_locus_tag=AL60_01132 NZ_KK316847.1 Protein Homology CDS 363160 363936 . + 0 ID=cds-WP_003899722.1;Parent=gene-AL60_RS11225;Dbxref=GenBank:WP_003899722.1;Name=WP_003899722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218356.1;locus_tag=AL60_RS11225;product=DUF2470 domain-containing protein;protein_id=WP_003899722.1;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 364007 364327 . + . ID=gene-AL60_RS11230;Name=AL60_RS11230;end_range=364327,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS11230;old_locus_tag=AL60_01133;partial=true;pseudo=true;start_range=.,364007 NZ_KK316847.1 Protein Homology CDS 364007 364327 . + 0 ID=cds-AL60_RS11230;Parent=gene-AL60_RS11230;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0070726;end_range=364327,.;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020188363.1;locus_tag=AL60_RS11230;partial=true;product=LCP family protein;pseudo=true;start_range=.,364007;transl_table=11 NZ_KK316847.1 RefSeq gene 364573 365118 . + . ID=gene-AL60_RS11235;Name=bfrB;gbkey=Gene;gene=bfrB;gene_biotype=protein_coding;locus_tag=AL60_RS11235;old_locus_tag=AL60_01134 NZ_KK316847.1 Protein Homology CDS 364573 365118 . + 0 ID=cds-WP_003420920.1;Parent=gene-AL60_RS11235;Dbxref=GenBank:WP_003420920.1;Name=WP_003420920.1;gbkey=CDS;gene=bfrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218358.1;locus_tag=AL60_RS11235;product=ferritin BfrB;protein_id=WP_003420920.1;transl_table=11 NZ_KK316847.1 RefSeq gene 365133 365957 . - . ID=gene-AL60_RS11240;Name=AL60_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11240;old_locus_tag=AL60_01135 NZ_KK316847.1 Protein Homology CDS 365133 365957 . - 0 ID=cds-WP_003907140.1;Parent=gene-AL60_RS11240;Dbxref=GenBank:WP_003907140.1;Name=WP_003907140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218359.1;locus_tag=AL60_RS11240;product=glycerophosphodiester phosphodiesterase;protein_id=WP_003907140.1;transl_table=11 NZ_KK316847.1 RefSeq gene 365963 366991 . - . ID=gene-AL60_RS11245;Name=AL60_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11245;old_locus_tag=AL60_01136 NZ_KK316847.1 Protein Homology CDS 365963 366991 . - 0 ID=cds-WP_003899726.1;Parent=gene-AL60_RS11245;Dbxref=GenBank:WP_003899726.1;Name=WP_003899726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218360.1;locus_tag=AL60_RS11245;product=DUF4328 domain-containing protein;protein_id=WP_003899726.1;transl_table=11 NZ_KK316847.1 RefSeq gene 367530 367679 . + . ID=gene-AL60_RS27075;Name=AL60_RS27075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27075 NZ_KK316847.1 Protein Homology CDS 367530 367679 . + 0 ID=cds-WP_003420934.1;Parent=gene-AL60_RS27075;Dbxref=GenBank:WP_003420934.1;Name=WP_003420934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420934.1;locus_tag=AL60_RS27075;product=hypothetical protein;protein_id=WP_003420934.1;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 368464 368701 . + . ID=gene-AL60_RS27485;Name=AL60_RS27485;end_range=368701,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27485;partial=true;pseudo=true;start_range=.,368464 NZ_KK316847.1 Protein Homology CDS 368464 368701 . + 0 ID=cds-AL60_RS27485;Parent=gene-AL60_RS27485;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=368701,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=AL60_RS27485;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,368464;transl_table=11 NZ_KK316847.1 RefSeq gene 369170 369661 . + . ID=gene-AL60_RS11250;Name=AL60_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11250;old_locus_tag=AL60_01137 NZ_KK316847.1 Protein Homology CDS 369170 369661 . + 0 ID=cds-WP_003422266.1;Parent=gene-AL60_RS11250;Dbxref=GenBank:WP_003422266.1;Name=WP_003422266.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013698.7;locus_tag=AL60_RS11250;product=IS110 family transposase;protein_id=WP_003422266.1;transl_table=11 NZ_KK316847.1 RefSeq gene 369676 370035 . + . ID=gene-AL60_RS11255;Name=AL60_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11255;old_locus_tag=AL60_01138 NZ_KK316847.1 Protein Homology CDS 369676 370035 . + 0 ID=cds-WP_003900767.1;Parent=gene-AL60_RS11255;Dbxref=GenBank:WP_003900767.1;Name=WP_003900767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218362.1;locus_tag=AL60_RS11255;product=hypothetical protein;protein_id=WP_003900767.1;transl_table=11 NZ_KK316847.1 RefSeq gene 370649 370813 . - . ID=gene-AL60_RS27080;Name=AL60_RS27080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27080 NZ_KK316847.1 Protein Homology CDS 370649 370813 . - 0 ID=cds-WP_003399671.1;Parent=gene-AL60_RS27080;Dbxref=GenBank:WP_003399671.1;Name=WP_003399671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003399671.1;locus_tag=AL60_RS27080;product=hypothetical protein;protein_id=WP_003399671.1;transl_table=11 NZ_KK316847.1 RefSeq gene 371099 371722 . + . ID=gene-AL60_RS11260;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=AL60_RS11260;old_locus_tag=AL60_01139 NZ_KK316847.1 Protein Homology CDS 371099 371722 . + 0 ID=cds-WP_003399735.1;Parent=gene-AL60_RS11260;Dbxref=GenBank:WP_003399735.1;Name=WP_003399735.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218363.1;locus_tag=AL60_RS11260;product=superoxide dismutase;protein_id=WP_003399735.1;transl_table=11 NZ_KK316847.1 RefSeq gene 371933 372466 . + . ID=gene-AL60_RS11265;Name=AL60_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11265;old_locus_tag=AL60_01140 NZ_KK316847.1 Protein Homology CDS 371933 372466 . + 0 ID=cds-WP_003899730.1;Parent=gene-AL60_RS11265;Dbxref=GenBank:WP_003899730.1;Name=WP_003899730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218364.1;locus_tag=AL60_RS11265;product=hypothetical protein;protein_id=WP_003899730.1;transl_table=11 NZ_KK316847.1 RefSeq gene 372721 373629 . + . ID=gene-AL60_RS11270;Name=AL60_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11270;old_locus_tag=AL60_01141 NZ_KK316847.1 Protein Homology CDS 372721 373629 . + 0 ID=cds-WP_003399745.1;Parent=gene-AL60_RS11270;Dbxref=GenBank:WP_003399745.1;Name=WP_003399745.1;Ontology_term=GO:0030001,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218365.1;locus_tag=AL60_RS11270;product=TMEM165/GDT1 family protein;protein_id=WP_003399745.1;transl_table=11 NZ_KK316847.1 RefSeq gene 373894 374292 . + . ID=gene-AL60_RS11275;Name=espR;gbkey=Gene;gene=espR;gene_biotype=protein_coding;locus_tag=AL60_RS11275;old_locus_tag=AL60_01142 NZ_KK316847.1 Protein Homology CDS 373894 374292 . + 0 ID=cds-WP_003399759.1;Parent=gene-AL60_RS11275;Dbxref=GenBank:WP_003399759.1;Name=WP_003399759.1;gbkey=CDS;gene=espR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218366.1;locus_tag=AL60_RS11275;product=type VII secretion system ESX-1 transcriptional regulator EspR;protein_id=WP_003399759.1;transl_table=11 NZ_KK316847.1 RefSeq gene 374410 375066 . + . ID=gene-AL60_RS11280;Name=AL60_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11280;old_locus_tag=AL60_01143 NZ_KK316847.1 Protein Homology CDS 374410 375066 . + 0 ID=cds-WP_003399771.1;Parent=gene-AL60_RS11280;Dbxref=GenBank:WP_003399771.1;Name=WP_003399771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218367.1;locus_tag=AL60_RS11280;product=DUF6474 family protein;protein_id=WP_003399771.1;transl_table=11 NZ_KK316847.1 RefSeq gene 375078 375362 . + . ID=gene-AL60_RS11285;Name=AL60_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11285;old_locus_tag=AL60_01144 NZ_KK316847.1 Protein Homology CDS 375078 375362 . + 0 ID=cds-WP_003399775.1;Parent=gene-AL60_RS11285;Dbxref=GenBank:WP_003399775.1;Name=WP_003399775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218368.1;locus_tag=AL60_RS11285;product=hypothetical protein;protein_id=WP_003399775.1;transl_table=11 NZ_KK316847.1 RefSeq gene 375469 375873 . + . ID=gene-AL60_RS11290;Name=AL60_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11290;old_locus_tag=AL60_01145 NZ_KK316847.1 Protein Homology CDS 375469 375873 . + 0 ID=cds-WP_003399779.1;Parent=gene-AL60_RS11290;Dbxref=GenBank:WP_003399779.1;Name=WP_003399779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218369.1;locus_tag=AL60_RS11290;product=Rv3852 family protein;protein_id=WP_003399779.1;transl_table=11 NZ_KK316847.1 RefSeq gene 375890 376363 . + . ID=gene-AL60_RS11295;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=AL60_RS11295;old_locus_tag=AL60_01146 NZ_KK316847.1 Protein Homology CDS 375890 376363 . + 0 ID=cds-WP_003399786.1;Parent=gene-AL60_RS11295;Dbxref=GenBank:WP_003399786.1;Name=WP_003399786.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218370.1;locus_tag=AL60_RS11295;product=ribonuclease E activity regulator RraA;protein_id=WP_003399786.1;transl_table=11 NZ_KK316847.1 RefSeq gene 376399 377868 . - . ID=gene-AL60_RS11300;Name=ethA;gbkey=Gene;gene=ethA;gene_biotype=protein_coding;locus_tag=AL60_RS11300;old_locus_tag=AL60_01147 NZ_KK316847.1 Protein Homology CDS 376399 377868 . - 0 ID=cds-WP_003899731.1;Parent=gene-AL60_RS11300;Dbxref=GenBank:WP_003899731.1;Name=WP_003899731.1;gbkey=CDS;gene=ethA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218371.1;locus_tag=AL60_RS11300;product=FAD-containing monooxygenase EthA;protein_id=WP_003899731.1;transl_table=11 NZ_KK316847.1 RefSeq gene 377944 378594 . + . ID=gene-AL60_RS11305;Name=ethR;gbkey=Gene;gene=ethR;gene_biotype=protein_coding;locus_tag=AL60_RS11305;old_locus_tag=AL60_01148 NZ_KK316847.1 Protein Homology CDS 377944 378594 . + 0 ID=cds-WP_003399797.1;Parent=gene-AL60_RS11305;Dbxref=GenBank:WP_003399797.1;Name=WP_003399797.1;gbkey=CDS;gene=ethR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218372.1;locus_tag=AL60_RS11305;product=HTH-type transcriptional regulator EthR;protein_id=WP_003399797.1;transl_table=11 NZ_KK316847.1 RefSeq gene 378796 379803 . - . ID=gene-AL60_RS11310;Name=AL60_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11310;old_locus_tag=AL60_01149 NZ_KK316847.1 Protein Homology CDS 378796 379803 . - 0 ID=cds-WP_003399801.1;Parent=gene-AL60_RS11310;Dbxref=GenBank:WP_003399801.1;Name=WP_003399801.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218373.1;locus_tag=AL60_RS11310;product=PHP domain-containing protein;protein_id=WP_003399801.1;transl_table=11 NZ_KK316847.1 RefSeq gene 379812 380009 . - . ID=gene-AL60_RS11315;Name=AL60_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11315;old_locus_tag=AL60_01150 NZ_KK316847.1 GeneMarkS-2+ CDS 379812 380009 . - 0 ID=cds-WP_003399803.1;Parent=gene-AL60_RS11315;Dbxref=GenBank:WP_003399803.1;Name=WP_003399803.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS11315;product=hypothetical protein;protein_id=WP_003399803.1;transl_table=11 NZ_KK316847.1 RefSeq gene 380434 381900 . - . ID=gene-AL60_RS11320;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=AL60_RS11320;old_locus_tag=AL60_01152 NZ_KK316847.1 Protein Homology CDS 380434 381900 . - 0 ID=cds-WP_003899732.1;Parent=gene-AL60_RS11320;Dbxref=GenBank:WP_003899732.1;Name=WP_003899732.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218375.1;locus_tag=AL60_RS11320;product=glutamate synthase subunit beta;protein_id=WP_003899732.1;transl_table=11 NZ_KK316847.1 RefSeq gene 381893 386476 . - . ID=gene-AL60_RS11325;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=AL60_RS11325;old_locus_tag=AL60_01153 NZ_KK316847.1 Protein Homology CDS 381893 386476 . - 0 ID=cds-WP_003899733.1;Parent=gene-AL60_RS11325;Dbxref=GenBank:WP_003899733.1;Name=WP_003899733.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218376.1;locus_tag=AL60_RS11325;product=glutamate synthase large subunit;protein_id=WP_003899733.1;transl_table=11 NZ_KK316847.1 RefSeq gene 387173 388345 . + . ID=gene-AL60_RS11330;Name=AL60_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11330;old_locus_tag=AL60_01154 NZ_KK316847.1 Protein Homology CDS 387173 388345 . + 0 ID=cds-WP_003399818.1;Parent=gene-AL60_RS11330;Dbxref=GenBank:WP_003399818.1;Name=WP_003399818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218377.1;locus_tag=AL60_RS11330;product=MinD/ParA family ATP-binding protein;protein_id=WP_003399818.1;transl_table=11 NZ_KK316847.1 RefSeq gene 388342 388668 . + . ID=gene-AL60_RS11335;Name=AL60_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11335;old_locus_tag=AL60_01155 NZ_KK316847.1 Protein Homology CDS 388342 388668 . + 0 ID=cds-WP_003902567.1;Parent=gene-AL60_RS11335;Dbxref=GenBank:WP_003902567.1;Name=WP_003902567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218378.1;locus_tag=AL60_RS11335;product=hypothetical protein;protein_id=WP_003902567.1;transl_table=11 NZ_KK316847.1 RefSeq gene 388567 388917 . - . ID=gene-AL60_RS11340;Name=whiB6;gbkey=Gene;gene=whiB6;gene_biotype=protein_coding;locus_tag=AL60_RS11340;old_locus_tag=AL60_01156 NZ_KK316847.1 Protein Homology CDS 388567 388917 . - 0 ID=cds-WP_003899734.1;Parent=gene-AL60_RS11340;Dbxref=GenBank:WP_003899734.1;Name=WP_003899734.1;gbkey=CDS;gene=whiB6;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899734.1;locus_tag=AL60_RS11340;product=transcriptional regulator WhiB6;protein_id=WP_003899734.1;transl_table=11 NZ_KK316847.1 RefSeq gene 389310 390422 . + . ID=gene-AL60_RS11345;Name=AL60_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11345;old_locus_tag=AL60_01157 NZ_KK316847.1 Protein Homology CDS 389310 390422 . + 0 ID=cds-WP_015288657.1;Parent=gene-AL60_RS11345;Dbxref=GenBank:WP_015288657.1;Name=WP_015288657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291786.1;locus_tag=AL60_RS11345;product=ESX-1 type VII secretion system transcriptional regulator EspM;protein_id=WP_015288657.1;transl_table=11 NZ_KK316847.1 RefSeq gene 390665 391873 . + . ID=gene-AL60_RS11350;Name=espE;gbkey=Gene;gene=espE;gene_biotype=protein_coding;locus_tag=AL60_RS11350;old_locus_tag=AL60_01158 NZ_KK316847.1 Protein Homology CDS 390665 391873 . + 0 ID=cds-WP_003907147.1;Parent=gene-AL60_RS11350;Dbxref=GenBank:WP_003907147.1;Name=WP_003907147.1;gbkey=CDS;gene=espE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218381.1;locus_tag=AL60_RS11350;product=type VII secretion system ESX-1 associated protein EspE;protein_id=WP_003907147.1;transl_table=11 NZ_KK316847.1 RefSeq gene 391961 392272 . + . ID=gene-AL60_RS11355;Name=espF;gbkey=Gene;gene=espF;gene_biotype=protein_coding;locus_tag=AL60_RS11355;old_locus_tag=AL60_01159 NZ_KK316847.1 Protein Homology CDS 391961 392272 . + 0 ID=cds-WP_003899737.1;Parent=gene-AL60_RS11355;Dbxref=GenBank:WP_003899737.1;Name=WP_003899737.1;gbkey=CDS;gene=espF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218382.1;locus_tag=AL60_RS11355;product=type VII secretion system ESX-1 associated protein EspF;protein_id=WP_003899737.1;transl_table=11 NZ_KK316847.1 RefSeq gene 392275 393126 . + . ID=gene-AL60_RS11360;Name=espG1;gbkey=Gene;gene=espG1;gene_biotype=protein_coding;locus_tag=AL60_RS11360;old_locus_tag=AL60_01160 NZ_KK316847.1 Protein Homology CDS 392275 393126 . + 0 ID=cds-WP_003399839.1;Parent=gene-AL60_RS11360;Dbxref=GenBank:WP_003399839.1;Name=WP_003399839.1;gbkey=CDS;gene=espG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218383.1;locus_tag=AL60_RS11360;product=type VII secretion system ESX-1 adaptor EspG1;protein_id=WP_003399839.1;transl_table=11 NZ_KK316847.1 RefSeq gene 393165 393716 . + . ID=gene-AL60_RS11365;Name=espH;gbkey=Gene;gene=espH;gene_biotype=protein_coding;locus_tag=AL60_RS11365;old_locus_tag=AL60_01161 NZ_KK316847.1 Protein Homology CDS 393165 393716 . + 0 ID=cds-WP_003399844.1;Parent=gene-AL60_RS11365;Dbxref=GenBank:WP_003399844.1;Name=WP_003399844.1;gbkey=CDS;gene=espH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218384.1;locus_tag=AL60_RS11365;product=type VII secretion system ESX-1 associated protein EspH;protein_id=WP_003399844.1;transl_table=11 NZ_KK316847.1 RefSeq gene 393709 395430 . + . ID=gene-AL60_RS11370;Name=eccA1;gbkey=Gene;gene=eccA1;gene_biotype=protein_coding;locus_tag=AL60_RS11370;old_locus_tag=AL60_01162 NZ_KK316847.1 Protein Homology CDS 393709 395430 . + 0 ID=cds-WP_003399850.1;Parent=gene-AL60_RS11370;Dbxref=GenBank:WP_003399850.1;Name=WP_003399850.1;gbkey=CDS;gene=eccA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218385.1;locus_tag=AL60_RS11370;product=type VII secretion system ESX-1 AAA family ATPase EccA1;protein_id=WP_003399850.1;transl_table=11 NZ_KK316847.1 RefSeq gene 395434 396876 . + . ID=gene-AL60_RS11375;Name=eccB1;gbkey=Gene;gene=eccB1;gene_biotype=protein_coding;locus_tag=AL60_RS11375;old_locus_tag=AL60_01163 NZ_KK316847.1 Protein Homology CDS 395434 396876 . + 0 ID=cds-WP_003399854.1;Parent=gene-AL60_RS11375;Dbxref=GenBank:WP_003399854.1;Name=WP_003399854.1;gbkey=CDS;gene=eccB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218386.1;locus_tag=AL60_RS11375;product=type VII secretion system ESX-1 subunit EccB1;protein_id=WP_003399854.1;transl_table=11 NZ_KK316847.1 RefSeq gene 396876 399119 . + . ID=gene-AL60_RS11380;Name=eccCa1;gbkey=Gene;gene=eccCa1;gene_biotype=protein_coding;locus_tag=AL60_RS11380;old_locus_tag=AL60_01164 NZ_KK316847.1 Protein Homology CDS 396876 399119 . + 0 ID=cds-WP_003899738.1;Parent=gene-AL60_RS11380;Dbxref=GenBank:WP_003899738.1;Name=WP_003899738.1;gbkey=CDS;gene=eccCa1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218387.1;locus_tag=AL60_RS11380;product=type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase EccCa1;protein_id=WP_003899738.1;transl_table=11 NZ_KK316847.1 RefSeq pseudogene 399135 399208 . + . ID=gene-AL60_RS28105;Name=AL60_RS28105;end_range=399208,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28105;partial=true;pseudo=true NZ_KK316847.1 Protein Homology CDS 399135 399208 . + 0 ID=cds-AL60_RS28105;Parent=gene-AL60_RS28105;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=399208,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=AL60_RS28105;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316847.1 RefSeq gene 399222 400997 . + . ID=gene-AL60_RS11385;Name=eccCb1;gbkey=Gene;gene=eccCb1;gene_biotype=protein_coding;locus_tag=AL60_RS11385;old_locus_tag=AL60_01165 NZ_KK316847.1 Protein Homology CDS 399222 400997 . + 0 ID=cds-WP_012054385.1;Parent=gene-AL60_RS11385;Dbxref=GenBank:WP_012054385.1;Name=WP_012054385.1;gbkey=CDS;gene=eccCb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218388.1;locus_tag=AL60_RS11385;product=type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase EccCb1;protein_id=WP_012054385.1;transl_table=11 NZ_KK316847.1 RefSeq gene 401140 401436 . + . ID=gene-AL60_RS11390;Name=AL60_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11390;old_locus_tag=AL60_01166 NZ_KK316847.1 Protein Homology CDS 401140 401436 . + 0 ID=cds-WP_003399870.1;Parent=gene-AL60_RS11390;Dbxref=GenBank:WP_003399870.1;Name=WP_003399870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288658.1;locus_tag=AL60_RS11390;product=type VII secretion system ESX-1 target PE35;protein_id=WP_003399870.1;transl_table=11 NZ_KK316847.1 RefSeq gene 401470 402576 . + . ID=gene-AL60_RS11395;Name=AL60_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11395;old_locus_tag=AL60_01167 NZ_KK316847.1 Protein Homology CDS 401470 402576 . + 0 ID=cds-WP_003399879.1;Parent=gene-AL60_RS11395;Dbxref=GenBank:WP_003399879.1;Name=WP_003399879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178022.1;locus_tag=AL60_RS11395;product=type VII secretion system ESX-1 target PPE68;protein_id=WP_003399879.1;transl_table=11 NZ_KK316847.1 RefSeq gene 402669 402971 . + . ID=gene-AL60_RS11400;Name=esxB;gbkey=Gene;gene=esxB;gene_biotype=protein_coding;locus_tag=AL60_RS11400;old_locus_tag=AL60_01168 NZ_KK316847.1 Protein Homology CDS 402669 402971 . + 0 ID=cds-WP_003399940.1;Parent=gene-AL60_RS11400;Dbxref=GenBank:WP_003399940.1;Name=WP_003399940.1;gbkey=CDS;gene=esxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218391.1;locus_tag=AL60_RS11400;product=type VII secretion system ESX-1 WXG100 family target CFP-10;protein_id=WP_003399940.1;transl_table=11 NZ_KK316847.1 RefSeq gene 403004 403291 . + . ID=gene-AL60_RS11405;Name=esxA;gbkey=Gene;gene=esxA;gene_biotype=protein_coding;locus_tag=AL60_RS11405;old_locus_tag=AL60_01169 NZ_KK316847.1 Protein Homology CDS 403004 403291 . + 0 ID=cds-WP_003399963.1;Parent=gene-AL60_RS11405;Dbxref=GenBank:WP_003399963.1;Name=WP_003399963.1;gbkey=CDS;gene=esxA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178023.1;locus_tag=AL60_RS11405;product=type VII secretion system ESX-1 WXG100 family target ESAT-6;protein_id=WP_003399963.1;transl_table=11 NZ_KK316847.1 RefSeq gene 403405 405405 . + . ID=gene-AL60_RS11410;Name=espI;gbkey=Gene;gene=espI;gene_biotype=protein_coding;locus_tag=AL60_RS11410;old_locus_tag=AL60_01170 NZ_KK316847.1 Protein Homology CDS 403405 405405 . + 0 ID=cds-WP_003909105.1;Parent=gene-AL60_RS11410;Dbxref=GenBank:WP_003909105.1;Name=WP_003909105.1;gbkey=CDS;gene=espI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218393.1;locus_tag=AL60_RS11410;product=type VII secretion system ESX-1 associated protein EspI;protein_id=WP_003909105.1;transl_table=11 NZ_KK316847.1 RefSeq gene 405402 406937 . + . ID=gene-AL60_RS11415;Name=eccD1;gbkey=Gene;gene=eccD1;gene_biotype=protein_coding;locus_tag=AL60_RS11415;old_locus_tag=AL60_01171 NZ_KK316847.1 Protein Homology CDS 405402 406937 . + 0 ID=cds-WP_003399976.1;Parent=gene-AL60_RS11415;Dbxref=GenBank:WP_003399976.1;Name=WP_003399976.1;gbkey=CDS;gene=eccD1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218394.1;locus_tag=AL60_RS11415;product=type VII secretion system ESX-1 subunit EccD1;protein_id=WP_003399976.1;transl_table=11 NZ_KK316847.1 RefSeq gene 407088 407930 . + . ID=gene-AL60_RS11420;Name=espJ;gbkey=Gene;gene=espJ;gene_biotype=protein_coding;locus_tag=AL60_RS11420;old_locus_tag=AL60_01172 NZ_KK316847.1 Protein Homology CDS 407088 407930 . + 0 ID=cds-WP_003901751.1;Parent=gene-AL60_RS11420;Dbxref=GenBank:WP_003901751.1;Name=WP_003901751.1;gbkey=CDS;gene=espJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218395.1;locus_tag=AL60_RS11420;product=type VII secretion system ESX-1 associated protein EspJ;protein_id=WP_003901751.1;transl_table=11 NZ_KK316847.1 RefSeq gene 407988 409643 . - . ID=gene-AL60_RS11425;Name=espK;end_range=409643,.;gbkey=Gene;gene=espK;gene_biotype=protein_coding;locus_tag=AL60_RS11425;old_locus_tag=AL60_01173;partial=true NZ_KK316847.1 Protein Homology CDS 407988 409643 . - 0 ID=cds-WP_031707275.1;Parent=gene-AL60_RS11425;Dbxref=GenBank:WP_031707275.1;Name=WP_031707275.1;end_range=409643,.;gbkey=CDS;gene=espK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218396.1;locus_tag=AL60_RS11425;partial=true;product=type VII secretion system ESX-1 associated protein EspK;protein_id=WP_031707275.1;transl_table=11 ##sequence-region NZ_KK316848.1 1 356223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316848.1 RefSeq region 1 356223 . + . ID=NZ_KK316848.1:1..356223;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316848.1 RefSeq gene 1 398 . + . ID=gene-AL60_RS11430;Name=AL60_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11430;old_locus_tag=AL60_01174;partial=true;start_range=.,1 NZ_KK316848.1 Protein Homology CDS 1 398 . + 2 ID=cds-WP_031650382.1;Parent=gene-AL60_RS11430;Dbxref=GenBank:WP_031650382.1;Name=WP_031650382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS11430;partial=true;product=IS3 family transposase;protein_id=WP_031650382.1;start_range=.,1;transl_table=11 NZ_KK316848.1 RefSeq pseudogene 440 649 . - . ID=gene-AL60_RS11435;Name=AL60_RS11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS11435;old_locus_tag=AL60_01175;partial=true;pseudo=true;start_range=.,440 NZ_KK316848.1 Protein Homology CDS 440 649 . - 0 ID=cds-AL60_RS11435;Parent=gene-AL60_RS11435;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217333.1;locus_tag=AL60_RS11435;partial=true;product=CRISPR-associated endonuclease Cas1;pseudo=true;start_range=.,440;transl_table=11 NZ_KK316848.1 RefSeq gene 662 1909 . - . ID=gene-AL60_RS11440;Name=csm6;gbkey=Gene;gene=csm6;gene_biotype=protein_coding;locus_tag=AL60_RS11440;old_locus_tag=AL60_01176 NZ_KK316848.1 Protein Homology CDS 662 1909 . - 0 ID=cds-WP_003899494.1;Parent=gene-AL60_RS11440;Dbxref=GenBank:WP_003899494.1;Name=WP_003899494.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm6;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899494.1;locus_tag=AL60_RS11440;product=type III-A CRISPR-associated CARF protein Csm6;protein_id=WP_003899494.1;transl_table=11 NZ_KK316848.1 RefSeq gene 1906 3033 . - . ID=gene-AL60_RS11445;Name=csm5;gbkey=Gene;gene=csm5;gene_biotype=protein_coding;locus_tag=AL60_RS11445;old_locus_tag=AL60_01177 NZ_KK316848.1 Protein Homology CDS 1906 3033 . - 0 ID=cds-WP_003414285.1;Parent=gene-AL60_RS11445;Dbxref=GenBank:WP_003414285.1;Name=WP_003414285.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm5;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217335.1;locus_tag=AL60_RS11445;product=type III-A CRISPR-associated RAMP protein Csm5;protein_id=WP_003414285.1;transl_table=11 NZ_KK316848.1 RefSeq gene 3030 3938 . - . ID=gene-AL60_RS11450;Name=csm4;gbkey=Gene;gene=csm4;gene_biotype=protein_coding;locus_tag=AL60_RS11450;old_locus_tag=AL60_01178 NZ_KK316848.1 Protein Homology CDS 3030 3938 . - 0 ID=cds-WP_003414288.1;Parent=gene-AL60_RS11450;Dbxref=GenBank:WP_003414288.1;Name=WP_003414288.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm4;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217336.1;locus_tag=AL60_RS11450;product=type III-A CRISPR-associated RAMP protein Csm4;protein_id=WP_003414288.1;transl_table=11 NZ_KK316848.1 RefSeq gene 3919 4629 . - . ID=gene-AL60_RS11455;Name=csm3;gbkey=Gene;gene=csm3;gene_biotype=protein_coding;locus_tag=AL60_RS11455;old_locus_tag=AL60_01179 NZ_KK316848.1 Protein Homology CDS 3919 4629 . - 0 ID=cds-WP_003414292.1;Parent=gene-AL60_RS11455;Dbxref=GenBank:WP_003414292.1;Name=WP_003414292.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm3;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217337.1;locus_tag=AL60_RS11455;product=type III-A CRISPR-associated RAMP protein Csm3;protein_id=WP_003414292.1;transl_table=11 NZ_KK316848.1 RefSeq gene 4639 5013 . - . ID=gene-AL60_RS11460;Name=csm2;gbkey=Gene;gene=csm2;gene_biotype=protein_coding;locus_tag=AL60_RS11460;old_locus_tag=AL60_01180 NZ_KK316848.1 Protein Homology CDS 4639 5013 . - 0 ID=cds-WP_003414296.1;Parent=gene-AL60_RS11460;Dbxref=GenBank:WP_003414296.1;Name=WP_003414296.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm2;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217338.1;locus_tag=AL60_RS11460;product=type III-A CRISPR-associated protein Csm2;protein_id=WP_003414296.1;transl_table=11 NZ_KK316848.1 RefSeq gene 5010 7448 . - . ID=gene-AL60_RS11465;Name=cas10;gbkey=Gene;gene=cas10;gene_biotype=protein_coding;locus_tag=AL60_RS11465;old_locus_tag=AL60_01181 NZ_KK316848.1 Protein Homology CDS 5010 7448 . - 0 ID=cds-WP_003900580.1;Parent=gene-AL60_RS11465;Dbxref=GenBank:WP_003900580.1;Name=WP_003900580.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas10;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217339.1;locus_tag=AL60_RS11465;product=type III-A CRISPR-associated protein Cas10/Csm1;protein_id=WP_003900580.1;transl_table=11 NZ_KK316848.1 RefSeq gene 7445 8233 . - . ID=gene-AL60_RS11470;Name=cas6;gbkey=Gene;gene=cas6;gene_biotype=protein_coding;locus_tag=AL60_RS11470;old_locus_tag=AL60_01182 NZ_KK316848.1 Protein Homology CDS 7445 8233 . - 0 ID=cds-WP_003917092.1;Parent=gene-AL60_RS11470;Dbxref=GenBank:WP_003917092.1;Name=WP_003917092.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas6;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917092.1;locus_tag=AL60_RS11470;product=CRISPR-associated endoribonuclease Cas6;protein_id=WP_003917092.1;transl_table=11 NZ_KK316848.1 RefSeq gene 8567 9112 . - . ID=gene-AL60_RS11475;Name=AL60_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11475;old_locus_tag=AL60_01183 NZ_KK316848.1 Protein Homology CDS 8567 9112 . - 0 ID=cds-WP_003913758.1;Parent=gene-AL60_RS11475;Dbxref=GenBank:WP_003913758.1;Name=WP_003913758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217344.1;locus_tag=AL60_RS11475;product=DUF1802 family protein;protein_id=WP_003913758.1;transl_table=11 NZ_KK316848.1 RefSeq gene 9384 10268 . - . ID=gene-AL60_RS11480;Name=AL60_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11480;old_locus_tag=AL60_01184 NZ_KK316848.1 Protein Homology CDS 9384 10268 . - 0 ID=cds-WP_003414409.1;Parent=gene-AL60_RS11480;Dbxref=GenBank:WP_003414409.1;Name=WP_003414409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217342.1;locus_tag=AL60_RS11480;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_003414409.1;transl_table=11 NZ_KK316848.1 RefSeq gene 10271 11158 . - . ID=gene-AL60_RS11485;Name=AL60_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11485;old_locus_tag=AL60_01185 NZ_KK316848.1 Protein Homology CDS 10271 11158 . - 0 ID=cds-WP_003414414.1;Parent=gene-AL60_RS11485;Dbxref=GenBank:WP_003414414.1;Name=WP_003414414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217343.1;locus_tag=AL60_RS11485;product=type IV toxin-antitoxin system AbiEi family antitoxin;protein_id=WP_003414414.1;transl_table=11 NZ_KK316848.1 RefSeq gene 11463 12008 . - . ID=gene-AL60_RS11490;Name=AL60_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11490;old_locus_tag=AL60_01186 NZ_KK316848.1 Protein Homology CDS 11463 12008 . - 0 ID=cds-WP_003899500.1;Parent=gene-AL60_RS11490;Dbxref=GenBank:WP_003899500.1;Name=WP_003899500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217344.1;locus_tag=AL60_RS11490;product=DUF1802 family protein;protein_id=WP_003899500.1;transl_table=11 NZ_KK316848.1 RefSeq gene 12005 12274 . - . ID=gene-AL60_RS11495;Name=AL60_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11495;old_locus_tag=AL60_01187 NZ_KK316848.1 Protein Homology CDS 12005 12274 . - 0 ID=cds-WP_003414489.1;Parent=gene-AL60_RS11495;Dbxref=GenBank:WP_003414489.1;Name=WP_003414489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411535.1;locus_tag=AL60_RS11495;product=DUF2277 domain-containing protein;protein_id=WP_003414489.1;transl_table=11 NZ_KK316848.1 RefSeq gene 12295 12687 . - . ID=gene-AL60_RS11500;Name=AL60_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11500;old_locus_tag=AL60_01188 NZ_KK316848.1 Protein Homology CDS 12295 12687 . - 0 ID=cds-WP_003414492.1;Parent=gene-AL60_RS11500;Dbxref=GenBank:WP_003414492.1;Name=WP_003414492.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217345.1;locus_tag=AL60_RS11500;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414492.1;transl_table=11 NZ_KK316848.1 RefSeq gene 12684 12899 . - . ID=gene-AL60_RS11505;Name=AL60_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11505;old_locus_tag=AL60_01189 NZ_KK316848.1 Protein Homology CDS 12684 12899 . - 0 ID=cds-WP_003414495.1;Parent=gene-AL60_RS11505;Dbxref=GenBank:WP_003414495.1;Name=WP_003414495.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217346.1;locus_tag=AL60_RS11505;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003414495.1;transl_table=11 NZ_KK316848.1 RefSeq gene 12946 13695 . + . ID=gene-AL60_RS11510;Name=AL60_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11510;old_locus_tag=AL60_01190 NZ_KK316848.1 Protein Homology CDS 12946 13695 . + 0 ID=cds-WP_003414497.1;Parent=gene-AL60_RS11510;Dbxref=GenBank:WP_003414497.1;Name=WP_003414497.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217347.1;locus_tag=AL60_RS11510;product=enoyl-CoA hydratase;protein_id=WP_003414497.1;transl_table=11 NZ_KK316848.1 RefSeq gene 13774 14856 . - . ID=gene-AL60_RS11515;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=AL60_RS11515;old_locus_tag=AL60_01191 NZ_KK316848.1 Protein Homology CDS 13774 14856 . - 0 ID=cds-WP_003414499.1;Parent=gene-AL60_RS11515;Dbxref=GenBank:WP_003414499.1;Name=WP_003414499.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217348.1;locus_tag=AL60_RS11515;product=ABC transporter ATP-binding protein;protein_id=WP_003414499.1;transl_table=11 NZ_KK316848.1 RefSeq gene 14849 16159 . - . ID=gene-AL60_RS11520;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=AL60_RS11520;old_locus_tag=AL60_01192 NZ_KK316848.1 Protein Homology CDS 14849 16159 . - 0 ID=cds-WP_003414501.1;Parent=gene-AL60_RS11520;Dbxref=GenBank:WP_003414501.1;Name=WP_003414501.1;gbkey=CDS;gene=ugpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217349.1;locus_tag=AL60_RS11520;product=ABC transporter substrate-binding protein;protein_id=WP_003414501.1;transl_table=11 NZ_KK316848.1 RefSeq gene 16162 16989 . - . ID=gene-AL60_RS11525;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=AL60_RS11525;old_locus_tag=AL60_01193 NZ_KK316848.1 Protein Homology CDS 16162 16989 . - 0 ID=cds-WP_003414504.1;Parent=gene-AL60_RS11525;Dbxref=GenBank:WP_003414504.1;Name=WP_003414504.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=ugpE;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217350.1;locus_tag=AL60_RS11525;product=carbohydrate ABC transporter permease;protein_id=WP_003414504.1;transl_table=11 NZ_KK316848.1 RefSeq gene 16986 17897 . - . ID=gene-AL60_RS11530;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=AL60_RS11530;old_locus_tag=AL60_01194 NZ_KK316848.1 Protein Homology CDS 16986 17897 . - 0 ID=cds-WP_003414505.1;Parent=gene-AL60_RS11530;Dbxref=GenBank:WP_003414505.1;Name=WP_003414505.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=ugpA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217351.1;locus_tag=AL60_RS11530;product=carbohydrate ABC transporter permease;protein_id=WP_003414505.1;transl_table=11 NZ_KK316848.1 RefSeq gene 17984 19303 . - . ID=gene-AL60_RS11535;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=AL60_RS11535;old_locus_tag=AL60_01195 NZ_KK316848.1 Protein Homology CDS 17984 19303 . - 0 ID=cds-WP_003414506.1;Parent=gene-AL60_RS11535;Dbxref=GenBank:WP_003414506.1;Name=WP_003414506.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217352.1;locus_tag=AL60_RS11535;product=MATE family efflux transporter;protein_id=WP_003414506.1;transl_table=11 NZ_KK316848.1 RefSeq gene 19310 20320 . - . ID=gene-AL60_RS11540;Name=nrnA;gbkey=Gene;gene=nrnA;gene_biotype=protein_coding;locus_tag=AL60_RS11540;old_locus_tag=AL60_01196 NZ_KK316848.1 Protein Homology CDS 19310 20320 . - 0 ID=cds-WP_003414507.1;Parent=gene-AL60_RS11540;Dbxref=GenBank:WP_003414507.1;Name=WP_003414507.1;gbkey=CDS;gene=nrnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217353.1;locus_tag=AL60_RS11540;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=WP_003414507.1;transl_table=11 NZ_KK316848.1 RefSeq gene 20295 20846 . - . ID=gene-AL60_RS11545;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AL60_RS11545;old_locus_tag=AL60_01197 NZ_KK316848.1 Protein Homology CDS 20295 20846 . - 0 ID=cds-WP_003414508.1;Parent=gene-AL60_RS11545;Dbxref=GenBank:WP_003414508.1;Name=WP_003414508.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217354.1;locus_tag=AL60_RS11545;product=30S ribosome-binding factor RbfA;protein_id=WP_003414508.1;transl_table=11 NZ_KK316848.1 RefSeq gene 20846 23548 . - . ID=gene-AL60_RS11550;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AL60_RS11550;old_locus_tag=AL60_01198 NZ_KK316848.1 Protein Homology CDS 20846 23548 . - 0 ID=cds-WP_003899505.1;Parent=gene-AL60_RS11550;Dbxref=GenBank:WP_003899505.1;Name=WP_003899505.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217355.1;locus_tag=AL60_RS11550;product=translation initiation factor IF-2;protein_id=WP_003899505.1;transl_table=11 NZ_KK316848.1 RefSeq gene 23634 24011 . - . ID=gene-AL60_RS11555;Name=AL60_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11555;old_locus_tag=AL60_01199 NZ_KK316848.1 Protein Homology CDS 23634 24011 . - 0 ID=cds-WP_003899506.1;Parent=gene-AL60_RS11555;Dbxref=GenBank:WP_003899506.1;Name=WP_003899506.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF016204.6;locus_tag=AL60_RS11555;product=YlxR family protein;protein_id=WP_003899506.1;transl_table=11 NZ_KK316848.1 RefSeq gene 24060 25103 . - . ID=gene-AL60_RS11560;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AL60_RS11560;old_locus_tag=AL60_01200 NZ_KK316848.1 Protein Homology CDS 24060 25103 . - 0 ID=cds-WP_003414511.1;Parent=gene-AL60_RS11560;Dbxref=GenBank:WP_003414511.1;Name=WP_003414511.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217357.1;locus_tag=AL60_RS11560;product=transcription termination factor NusA;protein_id=WP_003414511.1;transl_table=11 NZ_KK316848.1 RefSeq gene 25100 25651 . - . ID=gene-AL60_RS11565;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=AL60_RS11565;old_locus_tag=AL60_01201 NZ_KK316848.1 Protein Homology CDS 25100 25651 . - 0 ID=cds-WP_003899507.1;Parent=gene-AL60_RS11565;Dbxref=GenBank:WP_003899507.1;Name=WP_003899507.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217358.1;locus_tag=AL60_RS11565;product=ribosome maturation factor RimP;protein_id=WP_003899507.1;transl_table=11 NZ_KK316848.1 RefSeq gene 25846 26391 . + . ID=gene-AL60_RS11570;Name=AL60_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11570;old_locus_tag=AL60_01202 NZ_KK316848.1 Protein Homology CDS 25846 26391 . + 0 ID=cds-WP_003414516.1;Parent=gene-AL60_RS11570;Dbxref=GenBank:WP_003414516.1;Name=WP_003414516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217359.1;locus_tag=AL60_RS11570;product=hypothetical protein;protein_id=WP_003414516.1;transl_table=11 NZ_KK316848.1 RefSeq gene 26388 26876 . + . ID=gene-AL60_RS11575;Name=AL60_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11575;old_locus_tag=AL60_01203 NZ_KK316848.1 Protein Homology CDS 26388 26876 . + 0 ID=cds-WP_003414522.1;Parent=gene-AL60_RS11575;Dbxref=GenBank:WP_003414522.1;Name=WP_003414522.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217360.1;locus_tag=AL60_RS11575;product=ferritin-like domain-containing protein;protein_id=WP_003414522.1;transl_table=11 NZ_KK316848.1 RefSeq gene 26877 28625 . - . ID=gene-AL60_RS11580;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=AL60_RS11580;old_locus_tag=AL60_01204 NZ_KK316848.1 Protein Homology CDS 26877 28625 . - 0 ID=cds-WP_003899508.1;Parent=gene-AL60_RS11580;Dbxref=GenBank:WP_003899508.1;Name=WP_003899508.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;gene=proS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217361.1;locus_tag=AL60_RS11580;product=proline--tRNA ligase;protein_id=WP_003899508.1;transl_table=11 NZ_KK316848.1 RefSeq gene 28714 30306 . - . ID=gene-AL60_RS11585;Name=efpA;gbkey=Gene;gene=efpA;gene_biotype=protein_coding;locus_tag=AL60_RS11585;old_locus_tag=AL60_01205 NZ_KK316848.1 Protein Homology CDS 28714 30306 . - 0 ID=cds-WP_003414532.1;Parent=gene-AL60_RS11585;Dbxref=GenBank:WP_003414532.1;Name=WP_003414532.1;gbkey=CDS;gene=efpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217362.1;locus_tag=AL60_RS11585;product=multidrug efflux MFS transporter EfpA;protein_id=WP_003414532.1;transl_table=11 NZ_KK316848.1 RefSeq gene 30329 31546 . - . ID=gene-AL60_RS11590;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=AL60_RS11590;old_locus_tag=AL60_01206 NZ_KK316848.1 Protein Homology CDS 30329 31546 . - 0 ID=cds-WP_003414535.1;Parent=gene-AL60_RS11590;Dbxref=GenBank:WP_003414535.1;Name=WP_003414535.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215025.2;locus_tag=AL60_RS11590;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_003414535.1;transl_table=11 NZ_KK316848.1 RefSeq gene 31823 33196 . - . ID=gene-AL60_RS11595;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=AL60_RS11595;old_locus_tag=AL60_01207 NZ_KK316848.1 Protein Homology CDS 31823 33196 . - 0 ID=cds-WP_003899509.1;Parent=gene-AL60_RS11595;Dbxref=GenBank:WP_003899509.1;Name=WP_003899509.1;Ontology_term=GO:0042242;gbkey=CDS;gene=cobB;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217364.1;locus_tag=AL60_RS11595;product=cobyrinic acid a%2Cc-diamide synthase CobB;protein_id=WP_003899509.1;transl_table=11 NZ_KK316848.1 RefSeq gene 33196 33819 . - . ID=gene-AL60_RS11600;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=AL60_RS11600;old_locus_tag=AL60_01208 NZ_KK316848.1 Protein Homology CDS 33196 33819 . - 0 ID=cds-WP_003414539.1;Parent=gene-AL60_RS11600;Dbxref=GenBank:WP_003414539.1;Name=WP_003414539.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177908.1;locus_tag=AL60_RS11600;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_003414539.1;transl_table=11 NZ_KK316848.1 RefSeq gene 33840 35729 . - . ID=gene-AL60_RS11605;Name=AL60_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11605;old_locus_tag=AL60_01209 NZ_KK316848.1 Protein Homology CDS 33840 35729 . - 0 ID=cds-WP_031721487.1;Parent=gene-AL60_RS11605;Dbxref=GenBank:WP_031721487.1;Name=WP_031721487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217366.1;locus_tag=AL60_RS11605;product=magnesium chelatase subunit D family protein;protein_id=WP_031721487.1;transl_table=11 NZ_KK316848.1 RefSeq gene 35726 36196 . - . ID=gene-AL60_RS11610;Name=AL60_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11610;old_locus_tag=AL60_01210 NZ_KK316848.1 Protein Homology CDS 35726 36196 . - 0 ID=cds-WP_003414543.1;Parent=gene-AL60_RS11610;Dbxref=GenBank:WP_003414543.1;Name=WP_003414543.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217367.1;locus_tag=AL60_RS11610;product=GNAT family N-acetyltransferase;protein_id=WP_003414543.1;transl_table=11 NZ_KK316848.1 RefSeq gene 36255 37736 . - . ID=gene-AL60_RS11615;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=AL60_RS11615;old_locus_tag=AL60_01211 NZ_KK316848.1 Protein Homology CDS 36255 37736 . - 0 ID=cds-WP_003414545.1;Parent=gene-AL60_RS11615;Dbxref=GenBank:WP_003414545.1;Name=WP_003414545.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217368.1;locus_tag=AL60_RS11615;product=malate dehydrogenase (quinone);protein_id=WP_003414545.1;transl_table=11 NZ_KK316848.1 RefSeq gene 37943 39790 . + . ID=gene-AL60_RS11620;Name=AL60_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11620;old_locus_tag=AL60_01212 NZ_KK316848.1 Protein Homology CDS 37943 39790 . + 0 ID=cds-WP_009938581.1;Parent=gene-AL60_RS11620;Dbxref=GenBank:WP_009938581.1;Name=WP_009938581.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177909.1;locus_tag=AL60_RS11620;product=PE family protein;protein_id=WP_009938581.1;transl_table=11 NZ_KK316848.1 RefSeq gene 39827 40867 . + . ID=gene-AL60_RS11625;Name=AL60_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11625;old_locus_tag=AL60_01213 NZ_KK316848.1 Protein Homology CDS 39827 40867 . + 0 ID=cds-WP_003906917.1;Parent=gene-AL60_RS11625;Dbxref=GenBank:WP_003906917.1;Name=WP_003906917.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217370.1;locus_tag=AL60_RS11625;product=alpha/beta hydrolase;protein_id=WP_003906917.1;transl_table=11 NZ_KK316848.1 RefSeq gene 40880 42259 . + . ID=gene-AL60_RS11630;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=AL60_RS11630;old_locus_tag=AL60_01214 NZ_KK316848.1 Protein Homology CDS 40880 42259 . + 0 ID=cds-WP_003414557.1;Parent=gene-AL60_RS11630;Dbxref=GenBank:WP_003414557.1;Name=WP_003414557.1;Ontology_term=GO:0010126,GO:0050627,GO:0070402;gbkey=CDS;gene=mtr;go_function=mycothione reductase [NAD(P)H] activity|0050627||IEA,NADPH binding|0070402||IEA;go_process=mycothiol metabolic process|0010126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177910.1;locus_tag=AL60_RS11630;product=mycothione reductase;protein_id=WP_003414557.1;transl_table=11 NZ_KK316848.1 RefSeq gene 42359 43477 . + . ID=gene-AL60_RS11635;Name=nicT;gbkey=Gene;gene=nicT;gene_biotype=protein_coding;locus_tag=AL60_RS11635;old_locus_tag=AL60_01215 NZ_KK316848.1 Protein Homology CDS 42359 43477 . + 0 ID=cds-WP_003414559.1;Parent=gene-AL60_RS11635;Dbxref=GenBank:WP_003414559.1;Name=WP_003414559.1;gbkey=CDS;gene=nicT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217372.1;locus_tag=AL60_RS11635;product=Nickel transporter NicT;protein_id=WP_003414559.1;transl_table=11 NZ_KK316848.1 RefSeq gene 43543 43875 . + . ID=gene-AL60_RS26795;Name=AL60_RS26795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26795;old_locus_tag=AL60_01216 NZ_KK316848.1 Protein Homology CDS 43543 43875 . + 0 ID=cds-WP_003414562.1;Parent=gene-AL60_RS26795;Dbxref=GenBank:WP_003414562.1;Name=WP_003414562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414562.1;locus_tag=AL60_RS26795;product=GTP-binding protein;protein_id=WP_003414562.1;transl_table=11 NZ_KK316848.1 RefSeq gene 43887 44102 . + . ID=gene-AL60_RS26800;Name=AL60_RS26800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26800;old_locus_tag=AL60_01217 NZ_KK316848.1 Protein Homology CDS 43887 44102 . + 0 ID=cds-WP_003414566.1;Parent=gene-AL60_RS26800;Dbxref=GenBank:WP_003414566.1;Name=WP_003414566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414566.1;locus_tag=AL60_RS26800;product=P-loop NTPase family protein;protein_id=WP_003414566.1;transl_table=11 NZ_KK316848.1 RefSeq gene 44258 45034 . - . ID=gene-AL60_RS11650;Name=AL60_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11650;old_locus_tag=AL60_01218 NZ_KK316848.1 Protein Homology CDS 44258 45034 . - 0 ID=cds-WP_003414570.1;Parent=gene-AL60_RS11650;Dbxref=GenBank:WP_003414570.1;Name=WP_003414570.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217373.1;locus_tag=AL60_RS11650;product=3-oxoacyl-ACP reductase;protein_id=WP_003414570.1;transl_table=11 NZ_KK316848.1 RefSeq gene 45031 46398 . - . ID=gene-AL60_RS11655;Name=aldC;gbkey=Gene;gene=aldC;gene_biotype=protein_coding;locus_tag=AL60_RS11655;old_locus_tag=AL60_01219 NZ_KK316848.1 Protein Homology CDS 45031 46398 . - 0 ID=cds-WP_003900585.1;Parent=gene-AL60_RS11655;Dbxref=GenBank:WP_003900585.1;Name=WP_003900585.1;Ontology_term=GO:0004030;gbkey=CDS;gene=aldC;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013988958.1;locus_tag=AL60_RS11655;product=aldehyde dehydrogenase family protein;protein_id=WP_003900585.1;transl_table=11 NZ_KK316848.1 RefSeq gene 46395 47228 . - . ID=gene-AL60_RS11660;Name=AL60_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11660;old_locus_tag=AL60_01220 NZ_KK316848.1 Protein Homology CDS 46395 47228 . - 0 ID=cds-WP_152311867.1;Parent=gene-AL60_RS11660;Dbxref=GenBank:WP_152311867.1;Name=WP_152311867.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901484.1;locus_tag=AL60_RS11660;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_152311867.1;transl_table=11 NZ_KK316848.1 RefSeq gene 47194 48567 . - . ID=gene-AL60_RS11665;Name=AL60_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11665;old_locus_tag=AL60_01221 NZ_KK316848.1 Protein Homology CDS 47194 48567 . - 0 ID=cds-WP_003414579.1;Parent=gene-AL60_RS11665;Dbxref=GenBank:WP_003414579.1;Name=WP_003414579.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217376.1;locus_tag=AL60_RS11665;product=glutamine synthetase family protein;protein_id=WP_003414579.1;transl_table=11 NZ_KK316848.1 RefSeq gene 48727 49584 . - . ID=gene-AL60_RS11670;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AL60_RS11670;old_locus_tag=AL60_01222 NZ_KK316848.1 Protein Homology CDS 48727 49584 . - 0 ID=cds-WP_003899513.1;Parent=gene-AL60_RS11670;Dbxref=GenBank:WP_003899513.1;Name=WP_003899513.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177911.1;locus_tag=AL60_RS11670;product=type I methionyl aminopeptidase;protein_id=WP_003899513.1;transl_table=11 NZ_KK316848.1 RefSeq gene 49626 50210 . - . ID=gene-AL60_RS11675;Name=AL60_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11675;old_locus_tag=AL60_01223 NZ_KK316848.1 Protein Homology CDS 49626 50210 . - 0 ID=cds-WP_003899514.1;Parent=gene-AL60_RS11675;Dbxref=GenBank:WP_003899514.1;Name=WP_003899514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217378.1;locus_tag=AL60_RS11675;product=DUF1707 SHOCT-like domain-containing protein;protein_id=WP_003899514.1;transl_table=11 NZ_KK316848.1 RefSeq gene 50314 50562 . + . ID=gene-AL60_RS0104460;Name=AL60_RS0104460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104460;old_locus_tag=AL60_01224 NZ_KK316848.1 Protein Homology CDS 50314 50562 . + 0 ID=cds-WP_003913411.1;Parent=gene-AL60_RS0104460;Dbxref=GenBank:WP_003913411.1;Name=WP_003913411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411570.1;locus_tag=AL60_RS0104460;product=antitoxin VapB23;protein_id=WP_003913411.1;transl_table=11 NZ_KK316848.1 RefSeq gene 50559 50939 . + . ID=gene-AL60_RS11680;Name=AL60_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11680;old_locus_tag=AL60_01225 NZ_KK316848.1 Protein Homology CDS 50559 50939 . + 0 ID=cds-WP_003414592.1;Parent=gene-AL60_RS11680;Dbxref=GenBank:WP_003414592.1;Name=WP_003414592.1;Ontology_term=GO:0004540,GO:0046872,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217379.1;locus_tag=AL60_RS11680;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414592.1;transl_table=11 NZ_KK316848.1 RefSeq gene 51021 52832 . - . ID=gene-AL60_RS11685;Name=AL60_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11685;old_locus_tag=AL60_01226 NZ_KK316848.1 Protein Homology CDS 51021 52832 . - 0 ID=cds-WP_003906921.1;Parent=gene-AL60_RS11685;Dbxref=GenBank:WP_003906921.1;Name=WP_003906921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217380.1;locus_tag=AL60_RS11685;product=penicillin-binding protein;protein_id=WP_003906921.1;transl_table=11 NZ_KK316848.1 RefSeq gene 53104 53385 . + . ID=gene-AL60_RS11690;Name=relF;gbkey=Gene;gene=relF;gene_biotype=protein_coding;locus_tag=AL60_RS11690;old_locus_tag=AL60_01227 NZ_KK316848.1 Protein Homology CDS 53104 53385 . + 0 ID=cds-WP_003414599.1;Parent=gene-AL60_RS11690;Dbxref=GenBank:WP_003414599.1;Name=WP_003414599.1;gbkey=CDS;gene=relF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217381.1;locus_tag=AL60_RS11690;product=type II toxin-antitoxin system antitoxin RelF;protein_id=WP_003414599.1;transl_table=11 NZ_KK316848.1 RefSeq gene 53389 53652 . + . ID=gene-AL60_RS11695;Name=relG;gbkey=Gene;gene=relG;gene_biotype=protein_coding;locus_tag=AL60_RS11695;old_locus_tag=AL60_01228 NZ_KK316848.1 Protein Homology CDS 53389 53652 . + 0 ID=cds-WP_003414602.1;Parent=gene-AL60_RS11695;Dbxref=GenBank:WP_003414602.1;Name=WP_003414602.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;gene=relG;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217382.1;locus_tag=AL60_RS11695;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_003414602.1;transl_table=11 NZ_KK316848.1 RefSeq gene 54025 54879 . - . ID=gene-AL60_RS11700;Name=AL60_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11700;old_locus_tag=AL60_01229 NZ_KK316848.1 Protein Homology CDS 54025 54879 . - 0 ID=cds-WP_003899516.1;Parent=gene-AL60_RS11700;Dbxref=GenBank:WP_003899516.1;Name=WP_003899516.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217383.1;locus_tag=AL60_RS11700;product=GNAT family N-acetyltransferase;protein_id=WP_003899516.1;transl_table=11 NZ_KK316848.1 RefSeq gene 54935 56098 . - . ID=gene-AL60_RS11705;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=AL60_RS11705;old_locus_tag=AL60_01230 NZ_KK316848.1 Protein Homology CDS 54935 56098 . - 0 ID=cds-WP_003899517.1;Parent=gene-AL60_RS11705;Dbxref=GenBank:WP_003899517.1;Name=WP_003899517.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217384.1;locus_tag=AL60_RS11705;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_003899517.1;transl_table=11 NZ_KK316848.1 RefSeq gene 56115 57329 . - . ID=gene-AL60_RS11710;Name=rip;gbkey=Gene;gene=rip;gene_biotype=protein_coding;locus_tag=AL60_RS11710;old_locus_tag=AL60_01231 NZ_KK316848.1 Protein Homology CDS 56115 57329 . - 0 ID=cds-WP_003899518.1;Parent=gene-AL60_RS11710;Dbxref=GenBank:WP_003899518.1;Name=WP_003899518.1;gbkey=CDS;gene=rip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217385.1;locus_tag=AL60_RS11710;product=zinc metalloprotease Rip;protein_id=WP_003899518.1;transl_table=11 NZ_KK316848.1 RefSeq gene 57337 58578 . - . ID=gene-AL60_RS11715;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=AL60_RS11715;old_locus_tag=AL60_01232 NZ_KK316848.1 Protein Homology CDS 57337 58578 . - 0 ID=cds-WP_003414613.1;Parent=gene-AL60_RS11715;Dbxref=GenBank:WP_003414613.1;Name=WP_003414613.1;Ontology_term=GO:0008299,GO:0019288,GO:0030604,GO:0046872,GO:0005737;gbkey=CDS;gene=dxr;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217386.2;locus_tag=AL60_RS11715;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_003414613.1;transl_table=11 NZ_KK316848.1 RefSeq gene 58705 58962 . + . ID=gene-AL60_RS11720;Name=AL60_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11720;old_locus_tag=AL60_01233 NZ_KK316848.1 Protein Homology CDS 58705 58962 . + 0 ID=cds-WP_003414620.1;Parent=gene-AL60_RS11720;Dbxref=GenBank:WP_003414620.1;Name=WP_003414620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217387.1;locus_tag=AL60_RS11720;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003414620.1;transl_table=11 NZ_KK316848.1 RefSeq gene 58949 59392 . + . ID=gene-AL60_RS11725;Name=AL60_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11725;old_locus_tag=AL60_01234 NZ_KK316848.1 Protein Homology CDS 58949 59392 . + 0 ID=cds-WP_003414624.1;Parent=gene-AL60_RS11725;Dbxref=GenBank:WP_003414624.1;Name=WP_003414624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217388.1;locus_tag=AL60_RS11725;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414624.1;transl_table=11 NZ_KK316848.1 RefSeq gene 59472 60134 . + . ID=gene-AL60_RS11730;Name=mpt83;gbkey=Gene;gene=mpt83;gene_biotype=protein_coding;locus_tag=AL60_RS11730;old_locus_tag=AL60_01235 NZ_KK316848.1 Protein Homology CDS 59472 60134 . + 0 ID=cds-WP_003414630.1;Parent=gene-AL60_RS11730;Dbxref=GenBank:WP_003414630.1;Name=WP_003414630.1;gbkey=CDS;gene=mpt83;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217389.1;locus_tag=AL60_RS11730;product=cell surface glycolipoprotein Mpt83;protein_id=WP_003414630.1;transl_table=11 NZ_KK316848.1 RefSeq gene 60230 60421 . + . ID=gene-AL60_RS11735;Name=AL60_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11735;old_locus_tag=AL60_01236 NZ_KK316848.1 Protein Homology CDS 60230 60421 . + 0 ID=cds-WP_003414632.1;Parent=gene-AL60_RS11735;Dbxref=GenBank:WP_003414632.1;Name=WP_003414632.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015630591.1;locus_tag=AL60_RS11735;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003414632.1;transl_table=11 NZ_KK316848.1 RefSeq gene 60753 62501 . + . ID=gene-AL60_RS11740;Name=AL60_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11740;old_locus_tag=AL60_01237 NZ_KK316848.1 Protein Homology CDS 60753 62501 . + 0 ID=cds-WP_003912869.1;Parent=gene-AL60_RS11740;Dbxref=GenBank:WP_003912869.1;Name=WP_003912869.1;Ontology_term=GO:0017004,GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303615.1;locus_tag=AL60_RS11740;product=cytochrome c biogenesis protein DipZ;protein_id=WP_003912869.1;transl_table=11 NZ_KK316848.1 RefSeq gene 62597 63178 . + . ID=gene-AL60_RS11745;Name=AL60_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11745;old_locus_tag=AL60_01238 NZ_KK316848.1 Protein Homology CDS 62597 63178 . + 0 ID=cds-WP_003414644.1;Parent=gene-AL60_RS11745;Dbxref=GenBank:WP_003414644.1;Name=WP_003414644.1;Ontology_term=GO:0007155;gbkey=CDS;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217391.1;locus_tag=AL60_RS11745;product=fasciclin domain-containing protein;protein_id=WP_003414644.1;transl_table=11 NZ_KK316848.1 RefSeq gene 63278 63544 . + . ID=gene-AL60_RS11750;Name=AL60_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11750;old_locus_tag=AL60_01239 NZ_KK316848.1 Protein Homology CDS 63278 63544 . + 0 ID=cds-WP_015456449.1;Parent=gene-AL60_RS11750;Dbxref=GenBank:WP_015456449.1;Name=WP_015456449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908416.1;locus_tag=AL60_RS11750;product=DUF2631 domain-containing protein;protein_id=WP_015456449.1;transl_table=11 NZ_KK316848.1 RefSeq gene 63575 64438 . - . ID=gene-AL60_RS11755;Name=AL60_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11755;old_locus_tag=AL60_01240 NZ_KK316848.1 Protein Homology CDS 63575 64438 . - 0 ID=cds-WP_003899523.1;Parent=gene-AL60_RS11755;Dbxref=GenBank:WP_003899523.1;Name=WP_003899523.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177912.1;locus_tag=AL60_RS11755;product=cytochrome c biogenesis CcdA family protein;protein_id=WP_003899523.1;transl_table=11 NZ_KK316848.1 RefSeq gene 64443 64964 . - . ID=gene-AL60_RS11760;Name=AL60_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11760;old_locus_tag=AL60_01241 NZ_KK316848.1 Protein Homology CDS 64443 64964 . - 0 ID=cds-WP_003414654.1;Parent=gene-AL60_RS11760;Dbxref=GenBank:WP_003414654.1;Name=WP_003414654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217394.1;locus_tag=AL60_RS11760;product=disulfide bond-forming protein DsbE;protein_id=WP_003414654.1;transl_table=11 NZ_KK316848.1 RefSeq gene 65150 66244 . - . ID=gene-AL60_RS11765;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=AL60_RS11765;old_locus_tag=AL60_01242 NZ_KK316848.1 Protein Homology CDS 65150 66244 . - 0 ID=cds-WP_003414658.1;Parent=gene-AL60_RS11765;Dbxref=GenBank:WP_003414658.1;Name=WP_003414658.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875108.1;locus_tag=AL60_RS11765;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_003414658.1;transl_table=11 NZ_KK316848.1 RefSeq gene 66267 67187 . - . ID=gene-AL60_RS11770;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AL60_RS11770;old_locus_tag=AL60_01243 NZ_KK316848.1 Protein Homology CDS 66267 67187 . - 0 ID=cds-WP_003414661.1;Parent=gene-AL60_RS11770;Dbxref=GenBank:WP_003414661.1;Name=WP_003414661.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;gene=cdsA;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217397.1;locus_tag=AL60_RS11770;product=phosphatidate cytidylyltransferase;protein_id=WP_003414661.1;transl_table=11 NZ_KK316848.1 RefSeq gene 67210 67767 . - . ID=gene-AL60_RS11775;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AL60_RS11775;old_locus_tag=AL60_01244 NZ_KK316848.1 Protein Homology CDS 67210 67767 . - 0 ID=cds-WP_003414663.1;Parent=gene-AL60_RS11775;Dbxref=GenBank:WP_003414663.1;Name=WP_003414663.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217398.1;locus_tag=AL60_RS11775;product=ribosome recycling factor;protein_id=WP_003414663.1;transl_table=11 NZ_KK316848.1 RefSeq pseudogene 67834 67907 . - . ID=gene-AL60_RS28110;Name=AL60_RS28110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28110;partial=true;pseudo=true;start_range=.,67834 NZ_KK316848.1 Protein Homology CDS 67834 67907 . - 0 ID=cds-AL60_RS28110;Parent=gene-AL60_RS28110;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=AL60_RS28110;partial=true;product=hypothetical protein;pseudo=true;start_range=.,67834;transl_table=11 NZ_KK316848.1 RefSeq gene 67939 68724 . - . ID=gene-AL60_RS11780;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AL60_RS11780;old_locus_tag=AL60_01245 NZ_KK316848.1 Protein Homology CDS 67939 68724 . - 0 ID=cds-WP_003414665.1;Parent=gene-AL60_RS11780;Dbxref=GenBank:WP_003414665.1;Name=WP_003414665.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217399.1;locus_tag=AL60_RS11780;product=UMP kinase;protein_id=WP_003414665.1;transl_table=11 NZ_KK316848.1 RefSeq gene 68959 69717 . + . ID=gene-AL60_RS11785;Name=AL60_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11785;old_locus_tag=AL60_01246 NZ_KK316848.1 Protein Homology CDS 68959 69717 . + 0 ID=cds-WP_003414666.1;Parent=gene-AL60_RS11785;Dbxref=GenBank:WP_003414666.1;Name=WP_003414666.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917701.1;locus_tag=AL60_RS11785;product=winged helix-turn-helix domain-containing protein;protein_id=WP_003414666.1;transl_table=11 NZ_KK316848.1 RefSeq gene 69732 71111 . - . ID=gene-AL60_RS11790;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AL60_RS11790;old_locus_tag=AL60_01247 NZ_KK316848.1 Protein Homology CDS 69732 71111 . - 0 ID=cds-WP_003914915.1;Parent=gene-AL60_RS11790;Dbxref=GenBank:WP_003914915.1;Name=WP_003914915.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351709.1;locus_tag=AL60_RS11790;product=IS607 family element RNA-guided endonuclease TnpB;protein_id=WP_003914915.1;transl_table=11 NZ_KK316848.1 RefSeq gene 71111 71698 . - . ID=gene-AL60_RS0104465;Name=AL60_RS0104465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104465;old_locus_tag=AL60_01248 NZ_KK316848.1 Protein Homology CDS 71111 71698 . - 0 ID=cds-WP_023641720.1;Parent=gene-AL60_RS0104465;Dbxref=GenBank:WP_023641720.1;Name=WP_023641720.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414668.1;locus_tag=AL60_RS0104465;product=IS607-like element IS1539 family transposase;protein_id=WP_023641720.1;transl_table=11 NZ_KK316848.1 RefSeq gene 71997 72416 . + . ID=gene-AL60_RS11795;Name=AL60_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11795;old_locus_tag=AL60_01249 NZ_KK316848.1 Protein Homology CDS 71997 72416 . + 0 ID=cds-WP_012054331.1;Parent=gene-AL60_RS11795;Dbxref=GenBank:WP_012054331.1;Name=WP_012054331.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217403.1;locus_tag=AL60_RS11795;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_012054331.1;transl_table=11 NZ_KK316848.1 RefSeq gene 72430 73851 . - . ID=gene-AL60_RS11800;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=AL60_RS11800;old_locus_tag=AL60_01250 NZ_KK316848.1 Protein Homology CDS 72430 73851 . - 0 ID=cds-WP_003414672.1;Parent=gene-AL60_RS11800;Dbxref=GenBank:WP_003414672.1;Name=WP_003414672.1;Ontology_term=GO:0003824;gbkey=CDS;gene=amiC;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217404.1;locus_tag=AL60_RS11800;product=amidase;protein_id=WP_003414672.1;transl_table=11 NZ_KK316848.1 RefSeq gene 73858 74673 . - . ID=gene-AL60_RS11805;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AL60_RS11805;old_locus_tag=AL60_01251 NZ_KK316848.1 Protein Homology CDS 73858 74673 . - 0 ID=cds-WP_003899527.1;Parent=gene-AL60_RS11805;Dbxref=GenBank:WP_003899527.1;Name=WP_003899527.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217405.1;locus_tag=AL60_RS11805;product=translation elongation factor Ts;protein_id=WP_003899527.1;transl_table=11 NZ_KK316848.1 RefSeq gene 74685 75548 . - . ID=gene-AL60_RS11810;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AL60_RS11810;old_locus_tag=AL60_01252 NZ_KK316848.1 Protein Homology CDS 74685 75548 . - 0 ID=cds-WP_003899528.1;Parent=gene-AL60_RS11810;Dbxref=GenBank:WP_003899528.1;Name=WP_003899528.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217406.1;locus_tag=AL60_RS11810;product=30S ribosomal protein S2;protein_id=WP_003899528.1;transl_table=11 NZ_KK316848.1 RefSeq pseudogene 75832 76227 . + . ID=gene-AL60_RS27085;Name=AL60_RS27085;end_range=76227,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27085;partial=true;pseudo=true NZ_KK316848.1 Protein Homology CDS 75832 76227 . + 0 ID=cds-AL60_RS27085;Parent=gene-AL60_RS27085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008237,GO:0046872;end_range=76227,.;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013700.7;locus_tag=AL60_RS27085;partial=true;product=M23 family metallopeptidase;pseudo=true;transl_table=11 NZ_KK316848.1 RefSeq gene 76360 77586 . - . ID=gene-AL60_RS11815;Name=AL60_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11815;old_locus_tag=AL60_01254 NZ_KK316848.1 Protein Homology CDS 76360 77586 . - 0 ID=cds-WP_003414680.1;Parent=gene-AL60_RS11815;Dbxref=GenBank:WP_003414680.1;Name=WP_003414680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177913.1;locus_tag=AL60_RS11815;product=PPE family protein;protein_id=WP_003414680.1;transl_table=11 NZ_KK316848.1 RefSeq gene 77986 78963 . + . ID=gene-AL60_RS11820;Name=AL60_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11820;old_locus_tag=AL60_01255 NZ_KK316848.1 Protein Homology CDS 77986 78963 . + 0 ID=cds-WP_003414686.1;Parent=gene-AL60_RS11820;Dbxref=GenBank:WP_003414686.1;Name=WP_003414686.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217409.1;locus_tag=AL60_RS11820;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003414686.1;transl_table=11 NZ_KK316848.1 RefSeq gene 78960 79856 . - . ID=gene-AL60_RS11825;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AL60_RS11825;old_locus_tag=AL60_01256 NZ_KK316848.1 Protein Homology CDS 78960 79856 . - 0 ID=cds-WP_003414689.1;Parent=gene-AL60_RS11825;Dbxref=GenBank:WP_003414689.1;Name=WP_003414689.1;Ontology_term=GO:0006313,GO:0007059,GO:0051301,GO:0003677,GO:0009037;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA,tyrosine-based site-specific recombinase activity|0009037||IEA;go_process=DNA transposition|0006313||IEA,chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217410.1;locus_tag=AL60_RS11825;product=tyrosine recombinase XerC;protein_id=WP_003414689.1;transl_table=11 NZ_KK316848.1 RefSeq gene 79947 80798 . - . ID=gene-AL60_RS11830;Name=viuB;gbkey=Gene;gene=viuB;gene_biotype=protein_coding;locus_tag=AL60_RS11830;old_locus_tag=AL60_01257 NZ_KK316848.1 Protein Homology CDS 79947 80798 . - 0 ID=cds-WP_003900590.1;Parent=gene-AL60_RS11830;Dbxref=GenBank:WP_003900590.1;Name=WP_003900590.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;gene=viuB;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217411.1;locus_tag=AL60_RS11830;product=siderophore-interacting protein;protein_id=WP_003900590.1;transl_table=11 NZ_KK316848.1 RefSeq gene 80831 82000 . - . ID=gene-AL60_RS11835;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=AL60_RS11835;old_locus_tag=AL60_01258 NZ_KK316848.1 Protein Homology CDS 80831 82000 . - 0 ID=cds-WP_003414694.1;Parent=gene-AL60_RS11835;Dbxref=GenBank:WP_003414694.1;Name=WP_003414694.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217412.2;locus_tag=AL60_RS11835;product=DNA-processing protein DprA;protein_id=WP_003414694.1;transl_table=11 NZ_KK316848.1 RefSeq gene 81997 83508 . - . ID=gene-AL60_RS11840;Name=AL60_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11840;old_locus_tag=AL60_01259 NZ_KK316848.1 Protein Homology CDS 81997 83508 . - 0 ID=cds-WP_003414700.1;Parent=gene-AL60_RS11840;Dbxref=GenBank:WP_003414700.1;Name=WP_003414700.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217413.1;locus_tag=AL60_RS11840;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_003414700.1;transl_table=11 NZ_KK316848.1 RefSeq gene 83508 83894 . - . ID=gene-AL60_RS11845;Name=AL60_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11845;old_locus_tag=AL60_01260 NZ_KK316848.1 Protein Homology CDS 83508 83894 . - 0 ID=cds-WP_003414702.1;Parent=gene-AL60_RS11845;Dbxref=GenBank:WP_003414702.1;Name=WP_003414702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217414.1;locus_tag=AL60_RS11845;product=YraN family protein;protein_id=WP_003414702.1;transl_table=11 NZ_KK316848.1 RefSeq gene 84142 84972 . - . ID=gene-AL60_RS11850;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=AL60_RS11850;old_locus_tag=AL60_01261 NZ_KK316848.1 Protein Homology CDS 84142 84972 . - 0 ID=cds-WP_003414705.1;Parent=gene-AL60_RS11850;Dbxref=GenBank:WP_003414705.1;Name=WP_003414705.1;Ontology_term=GO:0016783;gbkey=CDS;gene=fdhD;go_function=sulfurtransferase activity|0016783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217415.1;locus_tag=AL60_RS11850;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_003414705.1;transl_table=11 NZ_KK316848.1 RefSeq gene 84972 87311 . - . ID=gene-AL60_RS11855;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=AL60_RS11855;old_locus_tag=AL60_01262 NZ_KK316848.1 Protein Homology CDS 84972 87311 . - 0 ID=cds-WP_003899532.1;Parent=gene-AL60_RS11855;Dbxref=GenBank:WP_003899532.1;Name=WP_003899532.1;Ontology_term=GO:0016491,GO:0030151,GO:0051539;gbkey=CDS;gene=fdhF;go_function=oxidoreductase activity|0016491||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217416.1;locus_tag=AL60_RS11855;product=FdhF/YdeP family oxidoreductase;protein_id=WP_003899532.1;transl_table=11 NZ_KK316848.1 RefSeq gene 87369 87674 . - . ID=gene-AL60_RS11860;Name=AL60_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11860;old_locus_tag=AL60_01263 NZ_KK316848.1 Protein Homology CDS 87369 87674 . - 0 ID=cds-WP_003414710.1;Parent=gene-AL60_RS11860;Dbxref=GenBank:WP_003414710.1;Name=WP_003414710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217417.1;locus_tag=AL60_RS11860;product=DUF2469 domain-containing protein;protein_id=WP_003414710.1;transl_table=11 NZ_KK316848.1 RefSeq gene 87728 88522 . - . ID=gene-AL60_RS11865;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AL60_RS11865;old_locus_tag=AL60_01264 NZ_KK316848.1 Protein Homology CDS 87728 88522 . - 0 ID=cds-WP_003414713.1;Parent=gene-AL60_RS11865;Dbxref=GenBank:WP_003414713.1;Name=WP_003414713.1;gbkey=CDS;gene=rnhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217418.1;locus_tag=AL60_RS11865;product=ribonuclease HII;protein_id=WP_003414713.1;transl_table=11 NZ_KK316848.1 RefSeq gene 88536 89420 . - . ID=gene-AL60_RS11870;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AL60_RS11870;old_locus_tag=AL60_01265 NZ_KK316848.1 Protein Homology CDS 88536 89420 . - 0 ID=cds-WP_003414715.1;Parent=gene-AL60_RS11870;Dbxref=GenBank:WP_003414715.1;Name=WP_003414715.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217419.1;locus_tag=AL60_RS11870;product=signal peptidase I;protein_id=WP_003414715.1;transl_table=11 NZ_KK316848.1 RefSeq gene 89478 89819 . - . ID=gene-AL60_RS11875;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AL60_RS11875;old_locus_tag=AL60_01266 NZ_KK316848.1 Protein Homology CDS 89478 89819 . - 0 ID=cds-WP_003414717.1;Parent=gene-AL60_RS11875;Dbxref=GenBank:WP_003414717.1;Name=WP_003414717.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217420.1;locus_tag=AL60_RS11875;product=50S ribosomal protein L19;protein_id=WP_003414717.1;transl_table=11 NZ_KK316848.1 RefSeq gene 90194 91138 . + . ID=gene-AL60_RS11880;Name=AL60_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11880;old_locus_tag=AL60_01267 NZ_KK316848.1 Protein Homology CDS 90194 91138 . + 0 ID=cds-WP_031721488.1;Parent=gene-AL60_RS11880;Dbxref=GenBank:WP_031721488.1;Name=WP_031721488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217421.1;locus_tag=AL60_RS11880;product=serine hydrolase;protein_id=WP_031721488.1;transl_table=11 NZ_KK316848.1 RefSeq gene 91231 91923 . - . ID=gene-AL60_RS11885;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AL60_RS11885;old_locus_tag=AL60_01268 NZ_KK316848.1 Protein Homology CDS 91231 91923 . - 0 ID=cds-WP_003414722.1;Parent=gene-AL60_RS11885;Dbxref=GenBank:WP_003414722.1;Name=WP_003414722.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217422.1;locus_tag=AL60_RS11885;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_003414722.1;transl_table=11 NZ_KK316848.1 RefSeq gene 91927 92457 . - . ID=gene-AL60_RS11890;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AL60_RS11890;old_locus_tag=AL60_01269 NZ_KK316848.1 Protein Homology CDS 91927 92457 . - 0 ID=cds-WP_003414726.1;Parent=gene-AL60_RS11890;Dbxref=GenBank:WP_003414726.1;Name=WP_003414726.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217423.1;locus_tag=AL60_RS11890;product=ribosome maturation factor RimM;protein_id=WP_003414726.1;transl_table=11 NZ_KK316848.1 RefSeq gene 92471 92713 . - . ID=gene-AL60_RS11895;Name=AL60_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11895;old_locus_tag=AL60_01270 NZ_KK316848.1 Protein Homology CDS 92471 92713 . - 0 ID=cds-WP_003414728.1;Parent=gene-AL60_RS11895;Dbxref=GenBank:WP_003414728.1;Name=WP_003414728.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217424.1;locus_tag=AL60_RS11895;product=RNA-binding protein;protein_id=WP_003414728.1;transl_table=11 NZ_KK316848.1 RefSeq gene 92721 93209 . - . ID=gene-AL60_RS11900;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AL60_RS11900;old_locus_tag=AL60_01271 NZ_KK316848.1 Protein Homology CDS 92721 93209 . - 0 ID=cds-WP_003414731.1;Parent=gene-AL60_RS11900;Dbxref=GenBank:WP_003414731.1;Name=WP_003414731.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsP;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217425.1;locus_tag=AL60_RS11900;product=30S ribosomal protein S16;protein_id=WP_003414731.1;transl_table=11 NZ_KK316848.1 RefSeq gene 93393 93812 . - . ID=gene-AL60_RS11905;Name=AL60_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11905;old_locus_tag=AL60_01272 NZ_KK316848.1 Protein Homology CDS 93393 93812 . - 0 ID=cds-WP_003912031.1;Parent=gene-AL60_RS11905;Dbxref=GenBank:WP_003912031.1;Name=WP_003912031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875068.1;locus_tag=AL60_RS11905;product=nuclear transport factor 2 family protein;protein_id=WP_003912031.1;transl_table=11 NZ_KK316848.1 RefSeq gene 93905 94780 . + . ID=gene-AL60_RS11910;Name=dacB2;gbkey=Gene;gene=dacB2;gene_biotype=protein_coding;locus_tag=AL60_RS11910;old_locus_tag=AL60_01273 NZ_KK316848.1 Protein Homology CDS 93905 94780 . + 0 ID=cds-WP_003414736.1;Parent=gene-AL60_RS11910;Dbxref=GenBank:WP_003414736.1;Name=WP_003414736.1;gbkey=CDS;gene=dacB2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177914.1;locus_tag=AL60_RS11910;product=D-alanyl-D-alanine carboxypeptidase DacB2;protein_id=WP_003414736.1;transl_table=11 NZ_KK316848.1 RefSeq gene 94840 95427 . - . ID=gene-AL60_RS11915;Name=AL60_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11915;old_locus_tag=AL60_01274 NZ_KK316848.1 Protein Homology CDS 94840 95427 . - 0 ID=cds-WP_003414739.1;Parent=gene-AL60_RS11915;Dbxref=GenBank:WP_003414739.1;Name=WP_003414739.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217428.1;locus_tag=AL60_RS11915;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003414739.1;transl_table=11 NZ_KK316848.1 RefSeq gene 95429 97264 . - . ID=gene-AL60_RS11920;Name=AL60_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11920;old_locus_tag=AL60_01275 NZ_KK316848.1 Protein Homology CDS 95429 97264 . - 0 ID=cds-WP_003899536.1;Parent=gene-AL60_RS11920;Dbxref=GenBank:WP_003899536.1;Name=WP_003899536.1;Ontology_term=GO:0047420;gbkey=CDS;go_function=N-acyl-D-amino-acid deacylase activity|0047420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217429.1;locus_tag=AL60_RS11920;product=N-acyl-D-amino-acid deacylase family protein;protein_id=WP_003899536.1;transl_table=11 NZ_KK316848.1 RefSeq gene 97333 99090 . - . ID=gene-AL60_RS11925;Name=pknI;gbkey=Gene;gene=pknI;gene_biotype=protein_coding;locus_tag=AL60_RS11925;old_locus_tag=AL60_01276 NZ_KK316848.1 Protein Homology CDS 97333 99090 . - 0 ID=cds-WP_003900593.1;Parent=gene-AL60_RS11925;Dbxref=GenBank:WP_003900593.1;Name=WP_003900593.1;gbkey=CDS;gene=pknI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217430.1;locus_tag=AL60_RS11925;product=serine/threonine protein kinase PknI;protein_id=WP_003900593.1;transl_table=11 NZ_KK316848.1 RefSeq gene 99134 100246 . - . ID=gene-AL60_RS11930;Name=AL60_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11930;old_locus_tag=AL60_01277 NZ_KK316848.1 Protein Homology CDS 99134 100246 . - 0 ID=cds-WP_003899537.1;Parent=gene-AL60_RS11930;Dbxref=GenBank:WP_003899537.1;Name=WP_003899537.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217431.1;locus_tag=AL60_RS11930;product=metal-dependent hydrolase family protein;protein_id=WP_003899537.1;transl_table=11 NZ_KK316848.1 RefSeq gene 100274 101851 . - . ID=gene-AL60_RS11935;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AL60_RS11935;old_locus_tag=AL60_01278 NZ_KK316848.1 Protein Homology CDS 100274 101851 . - 0 ID=cds-WP_003414748.1;Parent=gene-AL60_RS11935;Dbxref=GenBank:WP_003414748.1;Name=WP_003414748.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217432.1;locus_tag=AL60_RS11935;product=signal recognition particle protein;protein_id=WP_003414748.1;transl_table=11 NZ_KK316848.1 RefSeq gene 102001 103809 . + . ID=gene-AL60_RS11940;Name=AL60_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11940;old_locus_tag=AL60_01279 NZ_KK316848.1 Protein Homology CDS 102001 103809 . + 0 ID=cds-WP_003912033.1;Parent=gene-AL60_RS11940;Dbxref=GenBank:WP_003912033.1;Name=WP_003912033.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584875.1;locus_tag=AL60_RS11940;product=DEAD/DEAH box helicase;protein_id=WP_003912033.1;transl_table=11 NZ_KK316848.1 RefSeq gene 103820 106246 . - . ID=gene-AL60_RS11945;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AL60_RS11945;old_locus_tag=AL60_01280 NZ_KK316848.1 Protein Homology CDS 103820 106246 . - 0 ID=cds-WP_003899539.1;Parent=gene-AL60_RS11945;Dbxref=GenBank:WP_003899539.1;Name=WP_003899539.1;Ontology_term=GO:0008152,GO:0008773;gbkey=CDS;gene=glnD;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217434.1;locus_tag=AL60_RS11945;product=[protein-PII] uridylyltransferase;protein_id=WP_003899539.1;transl_table=11 NZ_KK316848.1 RefSeq gene 106304 106642 . - . ID=gene-AL60_RS11950;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=AL60_RS11950;old_locus_tag=AL60_01281 NZ_KK316848.1 Protein Homology CDS 106304 106642 . - 0 ID=cds-WP_003414756.1;Parent=gene-AL60_RS11950;Dbxref=GenBank:WP_003414756.1;Name=WP_003414756.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217435.1;locus_tag=AL60_RS11950;product=nitrogen regulatory protein P-II;protein_id=WP_003414756.1;transl_table=11 NZ_KK316848.1 RefSeq gene 106639 108072 . - . ID=gene-AL60_RS11955;Name=amt;gbkey=Gene;gene=amt;gene_biotype=protein_coding;locus_tag=AL60_RS11955;old_locus_tag=AL60_01282 NZ_KK316848.1 Protein Homology CDS 106639 108072 . - 0 ID=cds-WP_003899540.1;Parent=gene-AL60_RS11955;Dbxref=GenBank:WP_003899540.1;Name=WP_003899540.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;gene=amt;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217436.1;locus_tag=AL60_RS11955;product=ammonium transporter;protein_id=WP_003899540.1;transl_table=11 NZ_KK316848.1 RefSeq gene 108493 109761 . - . ID=gene-AL60_RS11960;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=AL60_RS11960;old_locus_tag=AL60_01283 NZ_KK316848.1 Protein Homology CDS 108493 109761 . - 0 ID=cds-WP_003899541.1;Parent=gene-AL60_RS11960;Dbxref=GenBank:WP_003899541.1;Name=WP_003899541.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217437.1;locus_tag=AL60_RS11960;product=signal recognition particle-docking protein FtsY;protein_id=WP_003899541.1;transl_table=11 NZ_KK316848.1 RefSeq gene 109811 113428 . - . ID=gene-AL60_RS11965;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=AL60_RS11965;old_locus_tag=AL60_01284 NZ_KK316848.1 Protein Homology CDS 109811 113428 . - 0 ID=cds-WP_009937962.1;Parent=gene-AL60_RS11965;Dbxref=GenBank:WP_009937962.1;Name=WP_009937962.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217438.2;locus_tag=AL60_RS11965;product=chromosome segregation protein SMC;protein_id=WP_009937962.1;transl_table=11 NZ_KK316848.1 RefSeq gene 113440 113721 . - . ID=gene-AL60_RS11970;Name=acyP;gbkey=Gene;gene=acyP;gene_biotype=protein_coding;locus_tag=AL60_RS11970;old_locus_tag=AL60_01285 NZ_KK316848.1 Protein Homology CDS 113440 113721 . - 0 ID=cds-WP_003414811.1;Parent=gene-AL60_RS11970;Dbxref=GenBank:WP_003414811.1;Name=WP_003414811.1;Ontology_term=GO:0003998;gbkey=CDS;gene=acyP;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177679.1;locus_tag=AL60_RS11970;product=acylphosphatase;protein_id=WP_003414811.1;transl_table=11 NZ_KK316848.1 RefSeq gene 113708 114121 . - . ID=gene-AL60_RS11975;Name=AL60_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11975;old_locus_tag=AL60_01286 NZ_KK316848.1 Protein Homology CDS 113708 114121 . - 0 ID=cds-WP_003414812.1;Parent=gene-AL60_RS11975;Dbxref=GenBank:WP_003414812.1;Name=WP_003414812.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217439.1;locus_tag=AL60_RS11975;product=OsmC family protein;protein_id=WP_003414812.1;transl_table=11 NZ_KK316848.1 RefSeq gene 114223 115092 . - . ID=gene-AL60_RS11980;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AL60_RS11980;old_locus_tag=AL60_01287 NZ_KK316848.1 Protein Homology CDS 114223 115092 . - 0 ID=cds-WP_003414814.1;Parent=gene-AL60_RS11980;Dbxref=GenBank:WP_003414814.1;Name=WP_003414814.1;Ontology_term=GO:0006281,GO:0008534,GO:0046872,GO:0005737;gbkey=CDS;gene=mutM;go_component=cytoplasm|0005737||IEA;go_function=oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217440.1;locus_tag=AL60_RS11980;product=DNA-formamidopyrimidine glycosylase;protein_id=WP_003414814.1;transl_table=11 NZ_KK316848.1 RefSeq gene 115451 116173 . - . ID=gene-AL60_RS11985;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AL60_RS11985;old_locus_tag=AL60_01288 NZ_KK316848.1 Protein Homology CDS 115451 116173 . - 0 ID=cds-WP_003414820.1;Parent=gene-AL60_RS11985;Dbxref=GenBank:WP_003414820.1;Name=WP_003414820.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217441.1;locus_tag=AL60_RS11985;product=ribonuclease III;protein_id=WP_003414820.1;transl_table=11 NZ_KK316848.1 RefSeq gene 116170 116757 . - . ID=gene-AL60_RS11990;Name=AL60_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS11990;old_locus_tag=AL60_01289 NZ_KK316848.1 Protein Homology CDS 116170 116757 . - 0 ID=cds-WP_003912009.1;Parent=gene-AL60_RS11990;Dbxref=GenBank:WP_003912009.1;Name=WP_003912009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912009.1;locus_tag=AL60_RS11990;product=YceD family protein;protein_id=WP_003912009.1;transl_table=11 NZ_KK316848.1 RefSeq gene 116844 117581 . - . ID=gene-AL60_RS11995;Name=sepIVA;gbkey=Gene;gene=sepIVA;gene_biotype=protein_coding;locus_tag=AL60_RS11995;old_locus_tag=AL60_01290 NZ_KK316848.1 Protein Homology CDS 116844 117581 . - 0 ID=cds-WP_003414826.1;Parent=gene-AL60_RS11995;Dbxref=GenBank:WP_003414826.1;Name=WP_003414826.1;gbkey=CDS;gene=sepIVA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217443.1;locus_tag=AL60_RS11995;product=cell division protein SepIVA;protein_id=WP_003414826.1;transl_table=11 NZ_KK316848.1 RefSeq gene 117820 118605 . + . ID=gene-AL60_RS12000;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=AL60_RS12000;old_locus_tag=AL60_01291 NZ_KK316848.1 Protein Homology CDS 117820 118605 . + 0 ID=cds-WP_003414828.1;Parent=gene-AL60_RS12000;Dbxref=GenBank:WP_003414828.1;Name=WP_003414828.1;gbkey=CDS;gene=tesA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217444.1;locus_tag=AL60_RS12000;product=thioesterase TesA;protein_id=WP_003414828.1;transl_table=11 NZ_KK316848.1 RefSeq gene 118592 118903 . + . ID=gene-AL60_RS12005;Name=AL60_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12005;old_locus_tag=AL60_01292 NZ_KK316848.1 Protein Homology CDS 118592 118903 . + 0 ID=cds-WP_003900596.1;Parent=gene-AL60_RS12005;Dbxref=GenBank:WP_003900596.1;Name=WP_003900596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217445.1;locus_tag=AL60_RS12005;product=hypothetical protein;protein_id=WP_003900596.1;transl_table=11 NZ_KK316848.1 RefSeq gene 119319 121070 . + . ID=gene-AL60_RS12010;Name=fadD26;gbkey=Gene;gene=fadD26;gene_biotype=protein_coding;gene_synonym=faaL26;locus_tag=AL60_RS12010;old_locus_tag=AL60_01293 NZ_KK316848.1 Protein Homology CDS 119319 121070 . + 0 ID=cds-WP_003900597.1;Parent=gene-AL60_RS12010;Dbxref=GenBank:WP_003900597.1;Name=WP_003900597.1;gbkey=CDS;gene=fadD26;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217446.2;locus_tag=AL60_RS12010;product=long-chain-fatty-acid--AMP ligase FAAL26/FadD26;protein_id=WP_003900597.1;transl_table=11 NZ_KK316848.1 RefSeq gene 121067 126697 . + . ID=gene-AL60_RS12015;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=AL60_RS12015;old_locus_tag=AL60_01294 NZ_KK316848.1 Protein Homology CDS 121067 126697 . + 0 ID=cds-WP_003900598.1;Parent=gene-AL60_RS12015;Dbxref=GenBank:WP_003900598.1;Name=WP_003900598.1;gbkey=CDS;gene=ppsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217447.1;locus_tag=AL60_RS12015;product=phthiocerol type I polyketide synthase PpsA;protein_id=WP_003900598.1;transl_table=11 NZ_KK316848.1 RefSeq gene 126694 131310 . + . ID=gene-AL60_RS12020;Name=ppsB;gbkey=Gene;gene=ppsB;gene_biotype=protein_coding;locus_tag=AL60_RS12020;old_locus_tag=AL60_01295 NZ_KK316848.1 Protein Homology CDS 126694 131310 . + 0 ID=cds-WP_003899547.1;Parent=gene-AL60_RS12020;Dbxref=GenBank:WP_003899547.1;Name=WP_003899547.1;gbkey=CDS;gene=ppsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217448.1;locus_tag=AL60_RS12020;product=phthiocerol type I polyketide synthase PpsB;protein_id=WP_003899547.1;transl_table=11 NZ_KK316848.1 RefSeq gene 131307 137873 . + . ID=gene-AL60_RS12025;Name=ppsC;gbkey=Gene;gene=ppsC;gene_biotype=protein_coding;locus_tag=AL60_RS12025;old_locus_tag=AL60_01296 NZ_KK316848.1 Protein Homology CDS 131307 137873 . + 0 ID=cds-WP_003414837.1;Parent=gene-AL60_RS12025;Dbxref=GenBank:WP_003414837.1;Name=WP_003414837.1;gbkey=CDS;gene=ppsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217449.1;locus_tag=AL60_RS12025;product=phthiocerol type I polyketide synthase PpsC;protein_id=WP_003414837.1;transl_table=11 NZ_KK316848.1 RefSeq gene 137870 143353 . + . ID=gene-AL60_RS12030;Name=ppsD;gbkey=Gene;gene=ppsD;gene_biotype=protein_coding;locus_tag=AL60_RS12030;old_locus_tag=AL60_01297 NZ_KK316848.1 Protein Homology CDS 137870 143353 . + 0 ID=cds-WP_003899549.1;Parent=gene-AL60_RS12030;Dbxref=GenBank:WP_003899549.1;Name=WP_003899549.1;gbkey=CDS;gene=ppsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217450.1;locus_tag=AL60_RS12030;product=phthiocerol type I polyketide synthase PpsD;protein_id=WP_003899549.1;transl_table=11 NZ_KK316848.1 RefSeq gene 143359 147825 . + . ID=gene-AL60_RS12035;Name=ppsE;gbkey=Gene;gene=ppsE;gene_biotype=protein_coding;locus_tag=AL60_RS12035;old_locus_tag=AL60_01298 NZ_KK316848.1 Protein Homology CDS 143359 147825 . + 0 ID=cds-WP_003900602.1;Parent=gene-AL60_RS12035;Dbxref=GenBank:WP_003900602.1;Name=WP_003900602.1;gbkey=CDS;gene=ppsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217451.1;locus_tag=AL60_RS12035;product=phthiocerol type I polyketide synthase PpsE;protein_id=WP_003900602.1;transl_table=11 NZ_KK316848.1 RefSeq gene 147836 148831 . + . ID=gene-AL60_RS12040;Name=drrA;gbkey=Gene;gene=drrA;gene_biotype=protein_coding;locus_tag=AL60_RS12040;old_locus_tag=AL60_01299 NZ_KK316848.1 Protein Homology CDS 147836 148831 . + 0 ID=cds-WP_003901496.1;Parent=gene-AL60_RS12040;Dbxref=GenBank:WP_003901496.1;Name=WP_003901496.1;gbkey=CDS;gene=drrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217452.1;locus_tag=AL60_RS12040;product=daunorubicin ABC transporter ATP-binding protein DrrA;protein_id=WP_003901496.1;transl_table=11 NZ_KK316848.1 RefSeq gene 148828 149697 . + . ID=gene-AL60_RS12045;Name=drrB;gbkey=Gene;gene=drrB;gene_biotype=protein_coding;locus_tag=AL60_RS12045;old_locus_tag=AL60_01300 NZ_KK316848.1 Protein Homology CDS 148828 149697 . + 0 ID=cds-WP_003414848.1;Parent=gene-AL60_RS12045;Dbxref=GenBank:WP_003414848.1;Name=WP_003414848.1;gbkey=CDS;gene=drrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217453.1;locus_tag=AL60_RS12045;product=daunorubicin ABC transporter permease DrrB;protein_id=WP_003414848.1;transl_table=11 NZ_KK316848.1 RefSeq gene 149694 150524 . + . ID=gene-AL60_RS12050;Name=drrC;gbkey=Gene;gene=drrC;gene_biotype=protein_coding;locus_tag=AL60_RS12050;old_locus_tag=AL60_01301 NZ_KK316848.1 Protein Homology CDS 149694 150524 . + 0 ID=cds-WP_003414851.1;Parent=gene-AL60_RS12050;Dbxref=GenBank:WP_003414851.1;Name=WP_003414851.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=drrC;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217454.1;locus_tag=AL60_RS12050;product=ABC transporter permease;protein_id=WP_003414851.1;transl_table=11 NZ_KK316848.1 RefSeq gene 150571 151839 . + . ID=gene-AL60_RS12055;Name=AL60_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12055;old_locus_tag=AL60_01302 NZ_KK316848.1 Protein Homology CDS 150571 151839 . + 0 ID=cds-WP_003414853.1;Parent=gene-AL60_RS12055;Dbxref=GenBank:WP_003414853.1;Name=WP_003414853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217455.1;locus_tag=AL60_RS12055;product=phthiocerol/phthiodiolone dimycocerosyl transferase;protein_id=WP_003414853.1;transl_table=11 NZ_KK316848.1 RefSeq gene 152002 158337 . - . ID=gene-AL60_RS12060;Name=mas;gbkey=Gene;gene=mas;gene_biotype=protein_coding;locus_tag=AL60_RS12060;old_locus_tag=AL60_01303 NZ_KK316848.1 Protein Homology CDS 152002 158337 . - 0 ID=cds-WP_003899551.1;Parent=gene-AL60_RS12060;Dbxref=GenBank:WP_003899551.1;Name=WP_003899551.1;gbkey=CDS;gene=mas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217456.1;locus_tag=AL60_RS12060;product=mycocerosate synthase;protein_id=WP_003899551.1;transl_table=11 NZ_KK316848.1 RefSeq gene 158957 160699 . + . ID=gene-AL60_RS12065;Name=fadD28;gbkey=Gene;gene=fadD28;gene_biotype=protein_coding;locus_tag=AL60_RS12065;old_locus_tag=AL60_01304 NZ_KK316848.1 Protein Homology CDS 158957 160699 . + 0 ID=cds-WP_003414857.1;Parent=gene-AL60_RS12065;Dbxref=GenBank:WP_003414857.1;Name=WP_003414857.1;gbkey=CDS;gene=fadD28;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217457.1;locus_tag=AL60_RS12065;product=fatty-acid--AMP ligase FAAL28/FadD28;protein_id=WP_003414857.1;transl_table=11 NZ_KK316848.1 RefSeq gene 160692 163454 . + . ID=gene-AL60_RS12070;Name=mmpL7;gbkey=Gene;gene=mmpL7;gene_biotype=protein_coding;locus_tag=AL60_RS12070;old_locus_tag=AL60_01305 NZ_KK316848.1 Protein Homology CDS 160692 163454 . + 0 ID=cds-WP_003414861.1;Parent=gene-AL60_RS12070;Dbxref=GenBank:WP_003414861.1;Name=WP_003414861.1;gbkey=CDS;gene=mmpL7;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217458.1;locus_tag=AL60_RS12070;product=phthiocerol dimycocerosate RND transporter MmpL7;protein_id=WP_003414861.1;transl_table=11 NZ_KK316848.1 RefSeq gene 164086 165327 . + . ID=gene-AL60_RS12075;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AL60_RS12075;old_locus_tag=AL60_01306 NZ_KK316848.1 Protein Homology CDS 164086 165327 . + 0 ID=cds-WP_003414864.1;Parent=gene-AL60_RS12075;Dbxref=GenBank:WP_003414864.1;Name=WP_003414864.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414864.1;locus_tag=AL60_RS12075;product=IS21-like element ISMbo1 family transposase;protein_id=WP_003414864.1;transl_table=11 NZ_KK316848.1 RefSeq pseudogene 165327 166128 . + . ID=gene-AL60_RS0104490;Name=istB;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=AL60_RS0104490;old_locus_tag=AL60_01307;pseudo=true NZ_KK316848.1 Protein Homology CDS 165327 166128 . + 0 ID=cds-AL60_RS0104490;Parent=gene-AL60_RS0104490;Note=frameshifted;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_083047449.1;locus_tag=AL60_RS0104490;product=IS21-like element ISMbo1 family helper ATPase IstB;pseudo=true;transl_table=11 NZ_KK316848.1 RefSeq gene 166246 166947 . - . ID=gene-AL60_RS12080;Name=lppX;gbkey=Gene;gene=lppX;gene_biotype=protein_coding;locus_tag=AL60_RS12080;old_locus_tag=AL60_01308 NZ_KK316848.1 Protein Homology CDS 166246 166947 . - 0 ID=cds-WP_003414872.1;Parent=gene-AL60_RS12080;Dbxref=GenBank:WP_003414872.1;Name=WP_003414872.1;gbkey=CDS;gene=lppX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217461.1;locus_tag=AL60_RS12080;product=LppX_LprAFG lipoprotein;protein_id=WP_003414872.1;transl_table=11 NZ_KK316848.1 RefSeq pseudogene 167125 173441 . - . ID=gene-AL60_RS12085;Name=AL60_RS12085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS12085;old_locus_tag=AL60_01309;pseudo=true NZ_KK316848.1 Protein Homology CDS 167125 173441 . - 0 ID=cds-AL60_RS12085;Parent=gene-AL60_RS12085;Note=frameshifted;Ontology_term=GO:0006633,GO:0030639,GO:0034081;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003910947.1;locus_tag=AL60_RS12085;product=type I polyketide synthase;pseudo=true;transl_table=11 NZ_KK316848.1 RefSeq gene 173459 175576 . - . ID=gene-AL60_RS12095;Name=AL60_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12095;old_locus_tag=AL60_01311 NZ_KK316848.1 Protein Homology CDS 173459 175576 . - 0 ID=cds-WP_003414884.1;Parent=gene-AL60_RS12095;Dbxref=GenBank:WP_003414884.1;Name=WP_003414884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217464.1;locus_tag=AL60_RS12095;product=p-hydroxybenzoic acid--AMP ligase FadD22;protein_id=WP_003414884.1;transl_table=11 NZ_KK316848.1 RefSeq gene 175593 176192 . - . ID=gene-AL60_RS12100;Name=AL60_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12100;old_locus_tag=AL60_01312 NZ_KK316848.1 Protein Homology CDS 175593 176192 . - 0 ID=cds-WP_003414887.1;Parent=gene-AL60_RS12100;Dbxref=GenBank:WP_003414887.1;Name=WP_003414887.1;Ontology_term=GO:0006744,GO:0008813,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate lyase activity|0008813||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217465.1;locus_tag=AL60_RS12100;product=chorismate--pyruvate lyase family protein;protein_id=WP_003414887.1;transl_table=11 NZ_KK316848.1 RefSeq gene 176218 177966 . - . ID=gene-AL60_RS12105;Name=fadD29;gbkey=Gene;gene=fadD29;gene_biotype=protein_coding;gene_synonym=faaL29;locus_tag=AL60_RS12105;old_locus_tag=AL60_01313 NZ_KK316848.1 Protein Homology CDS 176218 177966 . - 0 ID=cds-WP_003912041.1;Parent=gene-AL60_RS12105;Dbxref=GenBank:WP_003912041.1;Name=WP_003912041.1;gbkey=CDS;gene=fadD29;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950805.1;locus_tag=AL60_RS12105;product=4-hydroxyphenylalkanoate adenylyltransferase FadD29;protein_id=WP_003912041.1;transl_table=11 NZ_KK316848.1 RefSeq gene 178725 179870 . - . ID=gene-AL60_RS12110;Name=AL60_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12110;old_locus_tag=AL60_01314 NZ_KK316848.1 Protein Homology CDS 178725 179870 . - 0 ID=cds-WP_003414891.1;Parent=gene-AL60_RS12110;Dbxref=GenBank:WP_003414891.1;Name=WP_003414891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217467.1;locus_tag=AL60_RS12110;product=phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase;protein_id=WP_003414891.1;transl_table=11 NZ_KK316848.1 RefSeq gene 180063 180875 . + . ID=gene-AL60_RS12115;Name=AL60_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12115;old_locus_tag=AL60_01315 NZ_KK316848.1 Protein Homology CDS 180063 180875 . + 0 ID=cds-WP_003414900.1;Parent=gene-AL60_RS12115;Dbxref=GenBank:WP_003414900.1;Name=WP_003414900.1;Ontology_term=GO:0071770,GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=DIM/DIP cell wall layer assembly|0071770||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217468.1;locus_tag=AL60_RS12115;product=phthiotriol/phenolphthiotriol dimycocerosates methyltransferase;protein_id=WP_003414900.1;transl_table=11 NZ_KK316848.1 RefSeq gene 180901 182157 . + . ID=gene-AL60_RS12120;Name=AL60_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12120;old_locus_tag=AL60_01316 NZ_KK316848.1 Protein Homology CDS 180901 182157 . + 0 ID=cds-WP_003414903.1;Parent=gene-AL60_RS12120;Dbxref=GenBank:WP_003414903.1;Name=WP_003414903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217469.1;locus_tag=AL60_RS12120;product=trans-acting enoyl reductase;protein_id=WP_003414903.1;transl_table=11 NZ_KK316848.1 RefSeq gene 182288 183013 . - . ID=gene-AL60_RS12125;Name=AL60_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12125;old_locus_tag=AL60_01317 NZ_KK316848.1 Protein Homology CDS 182288 183013 . - 0 ID=cds-WP_003414905.1;Parent=gene-AL60_RS12125;Dbxref=GenBank:WP_003414905.1;Name=WP_003414905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217470.1;locus_tag=AL60_RS12125;product=[2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 3'''-O-methyltransferase;protein_id=WP_003414905.1;transl_table=11 NZ_KK316848.1 RefSeq gene 183202 184167 . - . ID=gene-AL60_RS12130;Name=AL60_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12130;old_locus_tag=AL60_01318 NZ_KK316848.1 Protein Homology CDS 183202 184167 . - 0 ID=cds-WP_003414906.1;Parent=gene-AL60_RS12130;Dbxref=GenBank:WP_003414906.1;Name=WP_003414906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217471.1;locus_tag=AL60_RS12130;product=[2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 4'''-O-methyltransferase;protein_id=WP_003414906.1;transl_table=11 NZ_KK316848.1 RefSeq gene 184290 185021 . + . ID=gene-AL60_RS12135;Name=AL60_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12135;old_locus_tag=AL60_01319 NZ_KK316848.1 Protein Homology CDS 184290 185021 . + 0 ID=cds-WP_003899556.1;Parent=gene-AL60_RS12135;Dbxref=GenBank:WP_003899556.1;Name=WP_003899556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217472.1;locus_tag=AL60_RS12135;product=[alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 2'''-O-methyltransferase;protein_id=WP_003899556.1;transl_table=11 NZ_KK316848.1 RefSeq gene 185092 185919 . + . ID=gene-AL60_RS12140;Name=AL60_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12140;old_locus_tag=AL60_01320 NZ_KK316848.1 Protein Homology CDS 185092 185919 . + 0 ID=cds-WP_003414909.1;Parent=gene-AL60_RS12140;Dbxref=GenBank:WP_003414909.1;Name=WP_003414909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217473.1;locus_tag=AL60_RS12140;product=PGL/p-HBAD biosynthesis glycosyltransferase;protein_id=WP_003414909.1;transl_table=11 NZ_KK316848.1 RefSeq gene 186067 186273 . - . ID=gene-AL60_RS0104495;Name=AL60_RS0104495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104495 NZ_KK316848.1 Protein Homology CDS 186067 186273 . - 0 ID=cds-WP_003901502.1;Parent=gene-AL60_RS0104495;Dbxref=GenBank:WP_003901502.1;Name=WP_003901502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939955.1;locus_tag=AL60_RS0104495;product=hypothetical protein;protein_id=WP_003901502.1;transl_table=11 NZ_KK316848.1 RefSeq gene 186336 187622 . - . ID=gene-AL60_RS12145;Name=AL60_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12145;old_locus_tag=AL60_01321 NZ_KK316848.1 Protein Homology CDS 186336 187622 . - 0 ID=cds-WP_003899557.1;Parent=gene-AL60_RS12145;Dbxref=GenBank:WP_003899557.1;Name=WP_003899557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217474.1;locus_tag=AL60_RS12145;product=PGL/p-HBAD biosynthesis glycosyltransferase;protein_id=WP_003899557.1;transl_table=11 NZ_KK316848.1 RefSeq gene 187723 188460 . - . ID=gene-AL60_RS12150;Name=AL60_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12150;old_locus_tag=AL60_01322 NZ_KK316848.1 Protein Homology CDS 187723 188460 . - 0 ID=cds-WP_003414919.1;Parent=gene-AL60_RS12150;Dbxref=GenBank:WP_003414919.1;Name=WP_003414919.1;Ontology_term=GO:0071770,GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=DIM/DIP cell wall layer assembly|0071770||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217475.1;locus_tag=AL60_RS12150;product=rhamnosyl O-methyltransferase;protein_id=WP_003414919.1;transl_table=11 NZ_KK316848.1 RefSeq gene 188575 188823 . - . ID=gene-AL60_RS12155;Name=AL60_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12155;old_locus_tag=AL60_01323 NZ_KK316848.1 Protein Homology CDS 188575 188823 . - 0 ID=cds-WP_003899558.1;Parent=gene-AL60_RS12155;Dbxref=GenBank:WP_003899558.1;Name=WP_003899558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217476.1;locus_tag=AL60_RS12155;product=hypothetical protein;protein_id=WP_003899558.1;transl_table=11 NZ_KK316848.1 RefSeq pseudogene 188824 189294 . + . ID=gene-AL60_RS12160;Name=AL60_RS12160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS12160;old_locus_tag=AL60_01324;partial=true;pseudo=true;start_range=.,188824 NZ_KK316848.1 Protein Homology CDS 188824 189294 . + 0 ID=cds-AL60_RS12160;Parent=gene-AL60_RS12160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612244.1;locus_tag=AL60_RS12160;partial=true;product=transposase;pseudo=true;start_range=.,188824;transl_table=11 NZ_KK316848.1 RefSeq gene 189395 190744 . - . ID=gene-AL60_RS12165;Name=AL60_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12165;old_locus_tag=AL60_01325 NZ_KK316848.1 Protein Homology CDS 189395 190744 . - 0 ID=cds-WP_003414922.1;Parent=gene-AL60_RS12165;Dbxref=GenBank:WP_003414922.1;Name=WP_003414922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217478.1;locus_tag=AL60_RS12165;product=PGL/p-HBAD biosynthesis rhamnosyltransferase;protein_id=WP_003414922.1;transl_table=11 NZ_KK316848.1 RefSeq gene 190858 192078 . + . ID=gene-AL60_RS12170;Name=AL60_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12170;old_locus_tag=AL60_01326 NZ_KK316848.1 Protein Homology CDS 190858 192078 . + 0 ID=cds-WP_003414924.1;Parent=gene-AL60_RS12170;Dbxref=GenBank:WP_003414924.1;Name=WP_003414924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217479.1;locus_tag=AL60_RS12170;product=permease;protein_id=WP_003414924.1;transl_table=11 NZ_KK316848.1 RefSeq gene 192151 193083 . + . ID=gene-AL60_RS12175;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AL60_RS12175;old_locus_tag=AL60_01327 NZ_KK316848.1 Protein Homology CDS 192151 193083 . + 0 ID=cds-WP_003899559.1;Parent=gene-AL60_RS12175;Dbxref=GenBank:WP_003899559.1;Name=WP_003899559.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217480.1;locus_tag=AL60_RS12175;product=formyltetrahydrofolate deformylase;protein_id=WP_003899559.1;transl_table=11 NZ_KK316848.1 RefSeq pseudogene 193269 193401 . + . ID=gene-AL60_RS27495;Name=AL60_RS27495;end_range=193401,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27495;partial=true;pseudo=true;start_range=.,193269 NZ_KK316848.1 Protein Homology CDS 193269 193401 . + 0 ID=cds-AL60_RS27495;Parent=gene-AL60_RS27495;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=193401,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=AL60_RS27495;partial=true;product=ISL3-like element ISAar34 family transposase;pseudo=true;start_range=.,193269;transl_table=11 NZ_KK316848.1 RefSeq gene 193723 193908 . + . ID=gene-AL60_RS12180;Name=AL60_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12180;old_locus_tag=AL60_01328 NZ_KK316848.1 Protein Homology CDS 193723 193908 . + 0 ID=cds-WP_003414994.1;Parent=gene-AL60_RS12180;Dbxref=GenBank:WP_003414994.1;Name=WP_003414994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414994.1;locus_tag=AL60_RS12180;product=hypothetical protein;protein_id=WP_003414994.1;transl_table=11 NZ_KK316848.1 RefSeq gene 193952 194437 . - . ID=gene-AL60_RS12185;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AL60_RS12185;old_locus_tag=AL60_01329 NZ_KK316848.1 Protein Homology CDS 193952 194437 . - 0 ID=cds-WP_003414998.1;Parent=gene-AL60_RS12185;Dbxref=GenBank:WP_003414998.1;Name=WP_003414998.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217481.1;locus_tag=AL60_RS12185;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_003414998.1;transl_table=11 NZ_KK316848.1 RefSeq gene 194523 195089 . - . ID=gene-AL60_RS12190;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=AL60_RS12190;old_locus_tag=AL60_01330 NZ_KK316848.1 Protein Homology CDS 194523 195089 . - 0 ID=cds-WP_003415001.1;Parent=gene-AL60_RS12190;Dbxref=GenBank:WP_003415001.1;Name=WP_003415001.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217482.1;locus_tag=AL60_RS12190;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_003415001.1;transl_table=11 NZ_KK316848.1 RefSeq pseudogene 195088 195190 . - . ID=gene-AL60_RS28115;Name=AL60_RS28115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28115;partial=true;pseudo=true;start_range=.,195088 NZ_KK316848.1 Protein Homology CDS 195088 195190 . - 0 ID=cds-AL60_RS28115;Parent=gene-AL60_RS28115;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=AL60_RS28115;partial=true;product=hypothetical protein;pseudo=true;start_range=.,195088;transl_table=11 NZ_KK316848.1 RefSeq gene 195285 198668 . - . ID=gene-AL60_RS12195;Name=pca;gbkey=Gene;gene=pca;gene_biotype=protein_coding;locus_tag=AL60_RS12195;old_locus_tag=AL60_01331 NZ_KK316848.1 Protein Homology CDS 195285 198668 . - 0 ID=cds-WP_003415003.1;Parent=gene-AL60_RS12195;Dbxref=GenBank:WP_003415003.1;Name=WP_003415003.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;gene=pca;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217483.1;locus_tag=AL60_RS12195;product=pyruvate carboxylase;protein_id=WP_003415003.1;transl_table=11 NZ_KK316848.1 RefSeq gene 198693 199325 . - . ID=gene-AL60_RS12200;Name=AL60_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12200;old_locus_tag=AL60_01332 NZ_KK316848.1 Protein Homology CDS 198693 199325 . - 0 ID=cds-WP_003415007.1;Parent=gene-AL60_RS12200;Dbxref=GenBank:WP_003415007.1;Name=WP_003415007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217484.1;locus_tag=AL60_RS12200;product=vitamin K epoxide reductase family protein;protein_id=WP_003415007.1;transl_table=11 NZ_KK316848.1 RefSeq gene 199331 200098 . - . ID=gene-AL60_RS12205;Name=AL60_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12205;old_locus_tag=AL60_01333 NZ_KK316848.1 Protein Homology CDS 199331 200098 . - 0 ID=cds-WP_003415010.1;Parent=gene-AL60_RS12205;Dbxref=GenBank:WP_003415010.1;Name=WP_003415010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217485.1;locus_tag=AL60_RS12205;product=mycothiol-dependent reductase;protein_id=WP_003415010.1;transl_table=11 NZ_KK316848.1 RefSeq gene 200195 201325 . - . ID=gene-AL60_RS12210;Name=lipN;gbkey=Gene;gene=lipN;gene_biotype=protein_coding;locus_tag=AL60_RS12210;old_locus_tag=AL60_01334 NZ_KK316848.1 Protein Homology CDS 200195 201325 . - 0 ID=cds-WP_003415015.1;Parent=gene-AL60_RS12210;Dbxref=GenBank:WP_003415015.1;Name=WP_003415015.1;gbkey=CDS;gene=lipN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217486.1;locus_tag=AL60_RS12210;product=lipase/esterase LipN;protein_id=WP_003415015.1;transl_table=11 NZ_KK316848.1 RefSeq pseudogene 201523 201716 . + . ID=gene-AL60_RS12215;Name=AL60_RS12215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS12215;old_locus_tag=AL60_01335;partial=true;pseudo=true;start_range=.,201523 NZ_KK316848.1 Protein Homology CDS 201523 201716 . + 0 ID=cds-AL60_RS12215;Parent=gene-AL60_RS12215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019735927.1;locus_tag=AL60_RS12215;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,201523;transl_table=11 NZ_KK316848.1 RefSeq gene 201723 202571 . + . ID=gene-AL60_RS12220;Name=AL60_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12220;old_locus_tag=AL60_01336 NZ_KK316848.1 Protein Homology CDS 201723 202571 . + 0 ID=cds-WP_003899563.1;Parent=gene-AL60_RS12220;Dbxref=GenBank:WP_003899563.1;Name=WP_003899563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217487.1;locus_tag=AL60_RS12220;product=aldo/keto reductase;protein_id=WP_003899563.1;transl_table=11 NZ_KK316848.1 RefSeq gene 202645 203358 . - . ID=gene-AL60_RS12225;Name=AL60_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12225;old_locus_tag=AL60_01337 NZ_KK316848.1 Protein Homology CDS 202645 203358 . - 0 ID=cds-WP_003415024.1;Parent=gene-AL60_RS12225;Dbxref=GenBank:WP_003415024.1;Name=WP_003415024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217488.1;locus_tag=AL60_RS12225;product=HNH endonuclease family protein;protein_id=WP_003415024.1;transl_table=11 NZ_KK316848.1 RefSeq gene 203355 205568 . - . ID=gene-AL60_RS12230;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=AL60_RS12230;old_locus_tag=AL60_01338 NZ_KK316848.1 Protein Homology CDS 203355 205568 . - 0 ID=cds-WP_003415026.1;Parent=gene-AL60_RS12230;Dbxref=GenBank:WP_003415026.1;Name=WP_003415026.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678;gbkey=CDS;gene=recG;go_function=DNA helicase activity|0003678||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217489.1;locus_tag=AL60_RS12230;product=ATP-dependent DNA helicase RecG;protein_id=WP_003415026.1;transl_table=11 NZ_KK316848.1 RefSeq pseudogene 205571 207234 . - . ID=gene-AL60_RS12235;Name=AL60_RS12235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS12235;old_locus_tag=AL60_01339;pseudo=true NZ_KK316848.1 Protein Homology CDS 205571 207234 . - 0 ID=cds-AL60_RS12235;Parent=gene-AL60_RS12235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902383.1;locus_tag=AL60_RS12235;product=DAK2 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316848.1 RefSeq gene 207476 207670 . + . ID=gene-AL60_RS12245;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AL60_RS12245;old_locus_tag=AL60_01341 NZ_KK316848.1 Protein Homology CDS 207476 207670 . + 0 ID=cds-WP_003415030.1;Parent=gene-AL60_RS12245;Dbxref=GenBank:WP_003415030.1;Name=WP_003415030.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030042.1;locus_tag=AL60_RS12245;product=50S ribosomal protein L28;protein_id=WP_003415030.1;transl_table=11 NZ_KK316848.1 RefSeq gene 207693 208376 . - . ID=gene-AL60_RS12250;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AL60_RS12250;old_locus_tag=AL60_01342 NZ_KK316848.1 Protein Homology CDS 207693 208376 . - 0 ID=cds-WP_003899565.1;Parent=gene-AL60_RS12250;Dbxref=GenBank:WP_003899565.1;Name=WP_003899565.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217492.1;locus_tag=AL60_RS12250;product=uracil-DNA glycosylase;protein_id=WP_003899565.1;transl_table=11 NZ_KK316848.1 RefSeq gene 208409 209410 . - . ID=gene-AL60_RS12255;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=AL60_RS12255;old_locus_tag=AL60_01343 NZ_KK316848.1 Protein Homology CDS 208409 209410 . - 0 ID=cds-WP_003415034.1;Parent=gene-AL60_RS12255;Dbxref=GenBank:WP_003415034.1;Name=WP_003415034.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217493.1;locus_tag=AL60_RS12255;product=thiamine-phosphate kinase;protein_id=WP_003415034.1;transl_table=11 NZ_KK316848.1 RefSeq gene 209407 210786 . - . ID=gene-AL60_RS12260;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AL60_RS12260;old_locus_tag=AL60_01344 NZ_KK316848.1 Protein Homology CDS 209407 210786 . - 0 ID=cds-WP_003415037.1;Parent=gene-AL60_RS12260;Dbxref=GenBank:WP_003415037.1;Name=WP_003415037.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217494.1;locus_tag=AL60_RS12260;product=IS607 family element RNA-guided endonuclease TnpB;protein_id=WP_003415037.1;transl_table=11 NZ_KK316848.1 RefSeq gene 210786 211370 . - . ID=gene-AL60_RS12265;Name=AL60_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12265;old_locus_tag=AL60_01345 NZ_KK316848.1 Protein Homology CDS 210786 211370 . - 0 ID=cds-WP_003899566.1;Parent=gene-AL60_RS12265;Dbxref=GenBank:WP_003899566.1;Name=WP_003899566.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217495.1;locus_tag=AL60_RS12265;product=IS607 family transposase;protein_id=WP_003899566.1;transl_table=11 NZ_KK316848.1 RefSeq gene 211582 212127 . + . ID=gene-AL60_RS12270;Name=AL60_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12270;old_locus_tag=AL60_01346 NZ_KK316848.1 Protein Homology CDS 211582 212127 . + 0 ID=cds-WP_003415041.1;Parent=gene-AL60_RS12270;Dbxref=GenBank:WP_003415041.1;Name=WP_003415041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217496.1;locus_tag=AL60_RS12270;product=DUF3515 domain-containing protein;protein_id=WP_003415041.1;transl_table=11 NZ_KK316848.1 RefSeq gene 212497 213618 . - . ID=gene-AL60_RS12275;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=AL60_RS12275;old_locus_tag=AL60_01347 NZ_KK316848.1 Protein Homology CDS 212497 213618 . - 0 ID=cds-WP_003415088.1;Parent=gene-AL60_RS12275;Dbxref=GenBank:WP_003415088.1;Name=WP_003415088.1;gbkey=CDS;gene=ddlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217497.1;locus_tag=AL60_RS12275;product=D-alanine--D-alanine ligase DdlA;protein_id=WP_003415088.1;transl_table=11 NZ_KK316848.1 RefSeq gene 213696 214700 . - . ID=gene-AL60_RS12280;Name=AL60_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12280;old_locus_tag=AL60_01348 NZ_KK316848.1 Protein Homology CDS 213696 214700 . - 0 ID=cds-WP_003415091.1;Parent=gene-AL60_RS12280;Dbxref=GenBank:WP_003415091.1;Name=WP_003415091.1;Ontology_term=GO:0046167,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate biosynthetic process|0046167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217498.1;locus_tag=AL60_RS12280;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_003415091.1;transl_table=11 NZ_KK316848.1 RefSeq gene 214819 215463 . + . ID=gene-AL60_RS12285;Name=cofC;gbkey=Gene;gene=cofC;gene_biotype=protein_coding;locus_tag=AL60_RS12285;old_locus_tag=AL60_01349 NZ_KK316848.1 Protein Homology CDS 214819 215463 . + 0 ID=cds-WP_003415094.1;Parent=gene-AL60_RS12285;Dbxref=GenBank:WP_003415094.1;Name=WP_003415094.1;Ontology_term=GO:0043814;gbkey=CDS;gene=cofC;go_function=phospholactate guanylyltransferase activity|0043814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217499.1;locus_tag=AL60_RS12285;product=2-phospho-L-lactate guanylyltransferase;protein_id=WP_003415094.1;transl_table=11 NZ_KK316848.1 RefSeq gene 215555 217783 . + . ID=gene-AL60_RS12290;Name=AL60_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12290;old_locus_tag=AL60_01350 NZ_KK316848.1 Protein Homology CDS 215555 217783 . + 0 ID=cds-WP_023641722.1;Parent=gene-AL60_RS12290;Dbxref=GenBank:WP_023641722.1;Name=WP_023641722.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217500.1;locus_tag=AL60_RS12290;product=RNA degradosome polyphosphate kinase;protein_id=WP_023641722.1;transl_table=11 NZ_KK316848.1 RefSeq gene 217866 218819 . + . ID=gene-AL60_RS12295;Name=AL60_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12295;old_locus_tag=AL60_01351 NZ_KK316848.1 Protein Homology CDS 217866 218819 . + 0 ID=cds-WP_003899569.1;Parent=gene-AL60_RS12295;Dbxref=GenBank:WP_003899569.1;Name=WP_003899569.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217501.1;locus_tag=AL60_RS12295;product=8-oxo-(d)GTP phosphatase MutT1;protein_id=WP_003899569.1;transl_table=11 NZ_KK316848.1 RefSeq gene 218877 219521 . - . ID=gene-AL60_RS12300;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=AL60_RS12300;old_locus_tag=AL60_01352 NZ_KK316848.1 Protein Homology CDS 218877 219521 . - 0 ID=cds-WP_003415107.1;Parent=gene-AL60_RS12300;Dbxref=GenBank:WP_003415107.1;Name=WP_003415107.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217502.1;locus_tag=AL60_RS12300;product=DNA-binding protein HupB;protein_id=WP_003415107.1;transl_table=11 NZ_KK316848.1 RefSeq gene 219734 220330 . - . ID=gene-AL60_RS12305;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AL60_RS12305;old_locus_tag=AL60_01353 NZ_KK316848.1 Protein Homology CDS 219734 220330 . - 0 ID=cds-WP_003415110.1;Parent=gene-AL60_RS12305;Dbxref=GenBank:WP_003415110.1;Name=WP_003415110.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217503.1;locus_tag=AL60_RS12305;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_003415110.1;transl_table=11 NZ_KK316848.1 RefSeq gene 220355 221776 . - . ID=gene-AL60_RS12310;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=AL60_RS12310;old_locus_tag=AL60_01354 NZ_KK316848.1 Protein Homology CDS 220355 221776 . - 0 ID=cds-WP_003899570.1;Parent=gene-AL60_RS12310;Dbxref=GenBank:WP_003899570.1;Name=WP_003899570.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217504.1;locus_tag=AL60_RS12310;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_003899570.1;transl_table=11 NZ_KK316848.1 RefSeq gene 221848 222549 . + . ID=gene-AL60_RS12315;Name=AL60_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12315;old_locus_tag=AL60_01355 NZ_KK316848.1 Protein Homology CDS 221848 222549 . + 0 ID=cds-WP_003415115.1;Parent=gene-AL60_RS12315;Dbxref=GenBank:WP_003415115.1;Name=WP_003415115.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217505.1;locus_tag=AL60_RS12315;product=IclR family transcriptional regulator;protein_id=WP_003415115.1;transl_table=11 NZ_KK316848.1 RefSeq gene 222560 223420 . - . ID=gene-AL60_RS12320;Name=AL60_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12320;old_locus_tag=AL60_01356 NZ_KK316848.1 Protein Homology CDS 222560 223420 . - 0 ID=cds-WP_003415118.1;Parent=gene-AL60_RS12320;Dbxref=GenBank:WP_003415118.1;Name=WP_003415118.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217506.1;locus_tag=AL60_RS12320;product=class I SAM-dependent methyltransferase;protein_id=WP_003415118.1;transl_table=11 NZ_KK316848.1 RefSeq gene 223683 224174 . + . ID=gene-AL60_RS12325;Name=AL60_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12325;old_locus_tag=AL60_01357 NZ_KK316848.1 Protein Homology CDS 223683 224174 . + 0 ID=cds-WP_003899572.1;Parent=gene-AL60_RS12325;Dbxref=GenBank:WP_003899572.1;Name=WP_003899572.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217507.1;locus_tag=AL60_RS12325;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003899572.1;transl_table=11 NZ_KK316848.1 RefSeq gene 224248 224320 . - . ID=gene-AL60_RS12330;Name=AL60_RS12330;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS12330;old_locus_tag=AL60_01358 NZ_KK316848.1 tRNAscan-SE tRNA 224248 224320 . - . ID=rna-AL60_RS12330;Parent=gene-AL60_RS12330;anticodon=(pos:complement(224284..224286));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS12330;product=tRNA-Glu NZ_KK316848.1 tRNAscan-SE exon 224248 224320 . - . ID=exon-AL60_RS12330-1;Parent=rna-AL60_RS12330;anticodon=(pos:complement(224284..224286));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS12330;product=tRNA-Glu NZ_KK316848.1 RefSeq gene 224360 224431 . - . ID=gene-AL60_RS12335;Name=AL60_RS12335;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS12335;old_locus_tag=AL60_01359 NZ_KK316848.1 tRNAscan-SE tRNA 224360 224431 . - . ID=rna-AL60_RS12335;Parent=gene-AL60_RS12335;anticodon=(pos:complement(224396..224398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS12335;product=tRNA-Gln NZ_KK316848.1 tRNAscan-SE exon 224360 224431 . - . ID=exon-AL60_RS12335-1;Parent=rna-AL60_RS12335;anticodon=(pos:complement(224396..224398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS12335;product=tRNA-Gln NZ_KK316848.1 RefSeq gene 224506 225978 . - . ID=gene-AL60_RS12340;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AL60_RS12340;old_locus_tag=AL60_01360 NZ_KK316848.1 Protein Homology CDS 224506 225978 . - 0 ID=cds-WP_003415122.1;Parent=gene-AL60_RS12340;Dbxref=GenBank:WP_003415122.1;Name=WP_003415122.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177915.1;locus_tag=AL60_RS12340;product=glutamate--tRNA ligase;protein_id=WP_003415122.1;transl_table=11 NZ_KK316848.1 RefSeq gene 225975 226772 . - . ID=gene-AL60_RS12345;Name=AL60_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12345;old_locus_tag=AL60_01361 NZ_KK316848.1 Protein Homology CDS 225975 226772 . - 0 ID=cds-WP_003415138.1;Parent=gene-AL60_RS12345;Dbxref=GenBank:WP_003415138.1;Name=WP_003415138.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003415138.1;locus_tag=AL60_RS12345;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_003415138.1;transl_table=11 NZ_KK316848.1 RefSeq pseudogene 227012 228025 . + . ID=gene-AL60_RS12350;Name=AL60_RS12350;end_range=228025,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS12350;old_locus_tag=AL60_01362;partial=true;pseudo=true NZ_KK316848.1 Protein Homology CDS 227012 228025 . + 0 ID=cds-AL60_RS12350;Parent=gene-AL60_RS12350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=228025,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=AL60_RS12350;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_KK316848.1 RefSeq gene 228159 229169 . - . ID=gene-AL60_RS25780;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=AL60_RS25780;old_locus_tag=AL60_01363 NZ_KK316848.1 Protein Homology CDS 228159 229169 . - 0 ID=cds-WP_003899576.1;Parent=gene-AL60_RS25780;Dbxref=GenBank:WP_003899576.1;Name=WP_003899576.1;Ontology_term=GO:0009098,GO:0000287,GO:0003862,GO:0051287;gbkey=CDS;gene=leuB;go_function=magnesium ion binding|0000287||IEA,3-isopropylmalate dehydrogenase activity|0003862||IEA,NAD binding|0051287||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217511.1;locus_tag=AL60_RS25780;product=3-isopropylmalate dehydrogenase;protein_id=WP_003899576.1;transl_table=11 NZ_KK316848.1 RefSeq gene 229184 230770 . - . ID=gene-AL60_RS12355;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AL60_RS12355;old_locus_tag=AL60_01364 NZ_KK316848.1 Protein Homology CDS 229184 230770 . - 0 ID=cds-WP_003899578.1;Parent=gene-AL60_RS12355;Dbxref=GenBank:WP_003899578.1;Name=WP_003899578.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177916.1;locus_tag=AL60_RS12355;product=phosphoglycerate dehydrogenase;protein_id=WP_003899578.1;transl_table=11 NZ_KK316848.1 RefSeq gene 230800 232242 . + . ID=gene-AL60_RS12360;Name=AL60_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12360;old_locus_tag=AL60_01365 NZ_KK316848.1 Protein Homology CDS 230800 232242 . + 0 ID=cds-WP_003415150.1;Parent=gene-AL60_RS12360;Dbxref=GenBank:WP_003415150.1;Name=WP_003415150.1;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217513.1;locus_tag=AL60_RS12360;product=phytoene desaturase family protein;protein_id=WP_003415150.1;transl_table=11 NZ_KK316848.1 RefSeq gene 232434 232634 . - . ID=gene-AL60_RS0104500;Name=AL60_RS0104500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104500 NZ_KK316848.1 Protein Homology CDS 232434 232634 . - 0 ID=cds-WP_003900610.1;Parent=gene-AL60_RS0104500;Dbxref=GenBank:WP_003900610.1;Name=WP_003900610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908129.1;locus_tag=AL60_RS0104500;product=DUF433 domain-containing protein;protein_id=WP_003900610.1;transl_table=11 NZ_KK316848.1 RefSeq gene 232564 232977 . + . ID=gene-AL60_RS27500;Name=AL60_RS27500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27500;old_locus_tag=AL60_01366 NZ_KK316848.1 Protein Homology CDS 232564 232977 . + 0 ID=cds-WP_234712437.1;Parent=gene-AL60_RS27500;Dbxref=GenBank:WP_234712437.1;Name=WP_234712437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217514.1;locus_tag=AL60_RS27500;product=hypothetical protein;protein_id=WP_234712437.1;transl_table=11 NZ_KK316848.1 RefSeq gene 232926 233120 . - . ID=gene-AL60_RS27505;Name=AL60_RS27505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27505;old_locus_tag=AL60_01367 NZ_KK316848.1 Protein Homology CDS 232926 233120 . - 0 ID=cds-WP_229298038.1;Parent=gene-AL60_RS27505;Dbxref=GenBank:WP_229298038.1;Name=WP_229298038.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012876.6;locus_tag=AL60_RS27505;product=hypothetical protein;protein_id=WP_229298038.1;transl_table=11 NZ_KK316848.1 RefSeq gene 233303 234268 . + . ID=gene-AL60_RS12370;Name=lppY;gbkey=Gene;gene=lppY;gene_biotype=protein_coding;locus_tag=AL60_RS12370;old_locus_tag=AL60_01368 NZ_KK316848.1 Protein Homology CDS 233303 234268 . + 0 ID=cds-WP_003901513.1;Parent=gene-AL60_RS12370;Dbxref=GenBank:WP_003901513.1;Name=WP_003901513.1;gbkey=CDS;gene=lppY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217515.1;locus_tag=AL60_RS12370;product=DUF1259 domain-containing protein;protein_id=WP_003901513.1;transl_table=11 NZ_KK316848.1 RefSeq gene 234313 234972 . + . ID=gene-AL60_RS12375;Name=AL60_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12375;old_locus_tag=AL60_01369 NZ_KK316848.1 Protein Homology CDS 234313 234972 . + 0 ID=cds-WP_003415160.1;Parent=gene-AL60_RS12375;Dbxref=GenBank:WP_003415160.1;Name=WP_003415160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217516.1;locus_tag=AL60_RS12375;product=ABC transporter permease;protein_id=WP_003415160.1;transl_table=11 NZ_KK316848.1 RefSeq gene 235286 236287 . - . ID=gene-AL60_RS12380;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AL60_RS12380;old_locus_tag=AL60_01370 NZ_KK316848.1 Protein Homology CDS 235286 236287 . - 0 ID=cds-WP_003899581.1;Parent=gene-AL60_RS12380;Dbxref=GenBank:WP_003899581.1;Name=WP_003899581.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217517.3;locus_tag=AL60_RS12380;product=ketol-acid reductoisomerase;protein_id=WP_003899581.1;transl_table=11 NZ_KK316848.1 RefSeq gene 236325 236831 . - . ID=gene-AL60_RS12385;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AL60_RS12385;old_locus_tag=AL60_01371 NZ_KK316848.1 Protein Homology CDS 236325 236831 . - 0 ID=cds-WP_003415167.1;Parent=gene-AL60_RS12385;Dbxref=GenBank:WP_003415167.1;Name=WP_003415167.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217518.1;locus_tag=AL60_RS12385;product=acetolactate synthase small subunit;protein_id=WP_003415167.1;transl_table=11 NZ_KK316848.1 RefSeq gene 236831 238687 . - . ID=gene-AL60_RS12390;Name=AL60_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12390;old_locus_tag=AL60_01372 NZ_KK316848.1 Protein Homology CDS 236831 238687 . - 0 ID=cds-WP_003415168.1;Parent=gene-AL60_RS12390;Dbxref=GenBank:WP_003415168.1;Name=WP_003415168.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177917.1;locus_tag=AL60_RS12390;product=acetolactate synthase large subunit;protein_id=WP_003415168.1;transl_table=11 NZ_KK316848.1 RefSeq gene 239010 239387 . + . ID=gene-AL60_RS12395;Name=AL60_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12395;old_locus_tag=AL60_01373 NZ_KK316848.1 Protein Homology CDS 239010 239387 . + 0 ID=cds-WP_003900612.1;Parent=gene-AL60_RS12395;Dbxref=GenBank:WP_003900612.1;Name=WP_003900612.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900612.1;locus_tag=AL60_RS12395;product=PH domain-containing protein;protein_id=WP_003900612.1;transl_table=11 NZ_KK316848.1 RefSeq gene 239394 240233 . - . ID=gene-AL60_RS12400;Name=AL60_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12400;old_locus_tag=AL60_01374 NZ_KK316848.1 Protein Homology CDS 239394 240233 . - 0 ID=cds-WP_003415171.1;Parent=gene-AL60_RS12400;Dbxref=GenBank:WP_003415171.1;Name=WP_003415171.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217521.1;locus_tag=AL60_RS12400;product=DoxX family protein;protein_id=WP_003415171.1;transl_table=11 NZ_KK316848.1 RefSeq gene 240410 241531 . + . ID=gene-AL60_RS12405;Name=lppZ;gbkey=Gene;gene=lppZ;gene_biotype=protein_coding;locus_tag=AL60_RS12405;old_locus_tag=AL60_01375 NZ_KK316848.1 Protein Homology CDS 240410 241531 . + 0 ID=cds-WP_003415173.1;Parent=gene-AL60_RS12405;Dbxref=GenBank:WP_003415173.1;Name=WP_003415173.1;gbkey=CDS;gene=lppZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217522.1;locus_tag=AL60_RS12405;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_003415173.1;transl_table=11 NZ_KK316848.1 RefSeq gene 241537 242151 . - . ID=gene-AL60_RS12410;Name=AL60_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12410;old_locus_tag=AL60_01376 NZ_KK316848.1 Protein Homology CDS 241537 242151 . - 0 ID=cds-WP_003415174.1;Parent=gene-AL60_RS12410;Dbxref=GenBank:WP_003415174.1;Name=WP_003415174.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217523.1;locus_tag=AL60_RS12410;product=flavin reductase family protein;protein_id=WP_003415174.1;transl_table=11 NZ_KK316848.1 RefSeq gene 242345 242968 . + . ID=gene-AL60_RS12415;Name=AL60_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12415;old_locus_tag=AL60_01377 NZ_KK316848.1 Protein Homology CDS 242345 242968 . + 0 ID=cds-WP_003899584.1;Parent=gene-AL60_RS12415;Dbxref=GenBank:WP_003899584.1;Name=WP_003899584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217524.1;locus_tag=AL60_RS12415;product=MgtC/SapB family protein;protein_id=WP_003899584.1;transl_table=11 NZ_KK316848.1 RefSeq gene 242965 244494 . - . ID=gene-AL60_RS12420;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=AL60_RS12420;old_locus_tag=AL60_01378 NZ_KK316848.1 Protein Homology CDS 242965 244494 . - 0 ID=cds-WP_003415248.1;Parent=gene-AL60_RS12420;Dbxref=GenBank:WP_003415248.1;Name=WP_003415248.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217525.1;locus_tag=AL60_RS12420;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_003415248.1;transl_table=11 NZ_KK316848.1 RefSeq gene 244524 245555 . - . ID=gene-AL60_RS12425;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=AL60_RS12425;old_locus_tag=AL60_01379 NZ_KK316848.1 Protein Homology CDS 244524 245555 . - 0 ID=cds-WP_003415251.1;Parent=gene-AL60_RS12425;Dbxref=GenBank:WP_003415251.1;Name=WP_003415251.1;Ontology_term=GO:0006002,GO:0003872,GO:0005524,GO:0046872;gbkey=CDS;gene=pfkA;go_function=6-phosphofructokinase activity|0003872||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217526.1;locus_tag=AL60_RS12425;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_003415251.1;transl_table=11 NZ_KK316848.1 RefSeq gene 245651 247135 . - . ID=gene-AL60_RS12430;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=AL60_RS12430;old_locus_tag=AL60_01380 NZ_KK316848.1 Protein Homology CDS 245651 247135 . - 0 ID=cds-WP_003900613.1;Parent=gene-AL60_RS12430;Dbxref=GenBank:WP_003900613.1;Name=WP_003900613.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217527.2;locus_tag=AL60_RS12430;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_003900613.1;transl_table=11 NZ_KK316848.1 RefSeq gene 247132 247431 . - . ID=gene-AL60_RS12435;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=AL60_RS12435;old_locus_tag=AL60_01381 NZ_KK316848.1 Protein Homology CDS 247132 247431 . - 0 ID=cds-WP_003415256.1;Parent=gene-AL60_RS12435;Dbxref=GenBank:WP_003415256.1;Name=WP_003415256.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217528.1;locus_tag=AL60_RS12435;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_003415256.1;transl_table=11 NZ_KK316848.1 RefSeq gene 247516 248172 . + . ID=gene-AL60_RS12440;Name=AL60_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12440;old_locus_tag=AL60_01382 NZ_KK316848.1 Protein Homology CDS 247516 248172 . + 0 ID=cds-WP_003901515.1;Parent=gene-AL60_RS12440;Dbxref=GenBank:WP_003901515.1;Name=WP_003901515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217529.1;locus_tag=AL60_RS12440;product=ACT domain-containing protein;protein_id=WP_003901515.1;transl_table=11 NZ_KK316848.1 RefSeq gene 248246 250321 . - . ID=gene-AL60_RS12445;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AL60_RS12445;old_locus_tag=AL60_01383 NZ_KK316848.1 Protein Homology CDS 248246 250321 . - 0 ID=cds-WP_003415263.1;Parent=gene-AL60_RS12445;Dbxref=GenBank:WP_003415263.1;Name=WP_003415263.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217530.1;locus_tag=AL60_RS12445;product=NAD-dependent DNA ligase LigA;protein_id=WP_003415263.1;transl_table=11 NZ_KK316848.1 RefSeq gene 250352 251365 . - . ID=gene-AL60_RS12450;Name=AL60_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12450;old_locus_tag=AL60_01384 NZ_KK316848.1 Protein Homology CDS 250352 251365 . - 0 ID=cds-WP_003415268.1;Parent=gene-AL60_RS12450;Dbxref=GenBank:WP_003415268.1;Name=WP_003415268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217531.1;locus_tag=AL60_RS12450;product=uroporphyrinogen decarboxylase/cobalamine-independent methonine synthase family protein;protein_id=WP_003415268.1;transl_table=11 NZ_KK316848.1 RefSeq gene 251459 252088 . + . ID=gene-AL60_RS12455;Name=lpqA;gbkey=Gene;gene=lpqA;gene_biotype=protein_coding;locus_tag=AL60_RS12455;old_locus_tag=AL60_01385 NZ_KK316848.1 Protein Homology CDS 251459 252088 . + 0 ID=cds-WP_003415270.1;Parent=gene-AL60_RS12455;Dbxref=GenBank:WP_003415270.1;Name=WP_003415270.1;gbkey=CDS;gene=lpqA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217532.1;locus_tag=AL60_RS12455;product=sensor domain-containing protein;protein_id=WP_003415270.1;transl_table=11 NZ_KK316848.1 RefSeq gene 252191 252553 . - . ID=gene-AL60_RS12460;Name=esxQ;gbkey=Gene;gene=esxQ;gene_biotype=protein_coding;locus_tag=AL60_RS12460;old_locus_tag=AL60_01386 NZ_KK316848.1 Protein Homology CDS 252191 252553 . - 0 ID=cds-WP_003415272.1;Parent=gene-AL60_RS12460;Dbxref=GenBank:WP_003415272.1;Name=WP_003415272.1;gbkey=CDS;gene=esxQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217533.1;locus_tag=AL60_RS12460;product=type VII secretion system ESX-3 effector EsxQ;protein_id=WP_003415272.1;transl_table=11 NZ_KK316848.1 RefSeq gene 252640 253944 . - . ID=gene-AL60_RS12465;Name=AL60_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12465;old_locus_tag=AL60_01387 NZ_KK316848.1 Protein Homology CDS 252640 253944 . - 0 ID=cds-WP_003910691.1;Parent=gene-AL60_RS12465;Dbxref=GenBank:WP_003910691.1;Name=WP_003910691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177918.1;locus_tag=AL60_RS12465;product=PPE family protein;protein_id=WP_003910691.1;transl_table=11 NZ_KK316848.1 RefSeq pseudogene 254033 254116 . - . ID=gene-AL60_RS27510;Name=AL60_RS27510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27510;old_locus_tag=AL60_01388;partial=true;pseudo=true;start_range=.,254033 NZ_KK316848.1 Protein Homology CDS 254033 254116 . - 0 ID=cds-AL60_RS27510;Parent=gene-AL60_RS27510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177685.1;locus_tag=AL60_RS27510;partial=true;product=type VII secretion system ESX-3 target PE5;pseudo=true;start_range=.,254033;transl_table=11 NZ_KK316848.1 RefSeq gene 254196 254363 . - . ID=gene-AL60_RS27090;Name=AL60_RS27090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27090 NZ_KK316848.1 Protein Homology CDS 254196 254363 . - 0 ID=cds-WP_003917090.1;Parent=gene-AL60_RS27090;Dbxref=GenBank:WP_003917090.1;Name=WP_003917090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917090.1;locus_tag=AL60_RS27090;product=hypothetical protein;protein_id=WP_003917090.1;transl_table=11 NZ_KK316848.1 RefSeq gene 254412 254702 . - . ID=gene-AL60_RS12470;Name=esxR;gbkey=Gene;gene=esxR;gene_biotype=protein_coding;locus_tag=AL60_RS12470;old_locus_tag=AL60_01389 NZ_KK316848.1 Protein Homology CDS 254412 254702 . - 0 ID=cds-WP_003415340.1;Parent=gene-AL60_RS12470;Dbxref=GenBank:WP_003415340.1;Name=WP_003415340.1;Ontology_term=GO:0005576;gbkey=CDS;gene=esxR;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217535.1;locus_tag=AL60_RS12470;product=WXG100 family type VII secretion target;protein_id=WP_003415340.1;transl_table=11 NZ_KK316848.1 RefSeq gene 254737 255030 . - . ID=gene-AL60_RS12475;Name=esxG;gbkey=Gene;gene=esxG;gene_biotype=protein_coding;locus_tag=AL60_RS12475;old_locus_tag=AL60_01390 NZ_KK316848.1 Protein Homology CDS 254737 255030 . - 0 ID=cds-WP_003415342.1;Parent=gene-AL60_RS12475;Dbxref=GenBank:WP_003415342.1;Name=WP_003415342.1;gbkey=CDS;gene=esxG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177919.1;locus_tag=AL60_RS12475;product=type VII secretion system protein EsxG;protein_id=WP_003415342.1;transl_table=11 NZ_KK316848.1 RefSeq gene 255077 256384 . - . ID=gene-AL60_RS12480;Name=AL60_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12480;old_locus_tag=AL60_01391 NZ_KK316848.1 Protein Homology CDS 255077 256384 . - 0 ID=cds-WP_003910692.1;Parent=gene-AL60_RS12480;Dbxref=GenBank:WP_003910692.1;Name=WP_003910692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330432.1;locus_tag=AL60_RS12480;product=PPE family protein;protein_id=WP_003910692.1;transl_table=11 NZ_KK316848.1 RefSeq gene 256381 256695 . - . ID=gene-AL60_RS12485;Name=AL60_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12485;old_locus_tag=AL60_01392 NZ_KK316848.1 Protein Homology CDS 256381 256695 . - 0 ID=cds-WP_003415766.1;Parent=gene-AL60_RS12485;Dbxref=GenBank:WP_003415766.1;Name=WP_003415766.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177685.1;locus_tag=AL60_RS12485;product=PE family protein;protein_id=WP_003415766.1;transl_table=11 NZ_KK316848.1 RefSeq gene 257077 258324 . - . ID=gene-AL60_RS12490;Name=AL60_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12490;old_locus_tag=AL60_01393 NZ_KK316848.1 Protein Homology CDS 257077 258324 . - 0 ID=cds-WP_003900260.1;Parent=gene-AL60_RS12490;Dbxref=GenBank:WP_003900260.1;Name=WP_003900260.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL60_RS12490;product=IS256-like element IS1081 family transposase;protein_id=WP_003900260.1;transl_table=11 NZ_KK316848.1 RefSeq gene 258487 259590 . - . ID=gene-AL60_RS12495;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=AL60_RS12495;old_locus_tag=AL60_01394 NZ_KK316848.1 Protein Homology CDS 258487 259590 . - 0 ID=cds-WP_003415909.1;Parent=gene-AL60_RS12495;Dbxref=GenBank:WP_003415909.1;Name=WP_003415909.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217540.1;locus_tag=AL60_RS12495;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_003415909.1;transl_table=11 NZ_KK316848.1 RefSeq gene 259587 260768 . - . ID=gene-AL60_RS12500;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AL60_RS12500;old_locus_tag=AL60_01395 NZ_KK316848.1 Protein Homology CDS 259587 260768 . - 0 ID=cds-WP_003415911.1;Parent=gene-AL60_RS12500;Dbxref=GenBank:WP_003415911.1;Name=WP_003415911.1;Ontology_term=GO:0030170;gbkey=CDS;gene=iscS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217541.1;locus_tag=AL60_RS12500;product=cysteine desulfurase family protein;protein_id=WP_003415911.1;transl_table=11 NZ_KK316848.1 RefSeq gene 260865 261779 . - . ID=gene-AL60_RS12505;Name=AL60_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12505;old_locus_tag=AL60_01396 NZ_KK316848.1 Protein Homology CDS 260865 261779 . - 0 ID=cds-WP_003415914.1;Parent=gene-AL60_RS12505;Dbxref=GenBank:WP_003415914.1;Name=WP_003415914.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217542.1;locus_tag=AL60_RS12505;product=lysophospholipid acyltransferase family protein;protein_id=WP_003415914.1;transl_table=11 NZ_KK316848.1 RefSeq gene 261776 262621 . - . ID=gene-AL60_RS12510;Name=AL60_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12510;old_locus_tag=AL60_01397 NZ_KK316848.1 Protein Homology CDS 261776 262621 . - 0 ID=cds-WP_003900617.1;Parent=gene-AL60_RS12510;Dbxref=GenBank:WP_003900617.1;Name=WP_003900617.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217543.2;locus_tag=AL60_RS12510;product=GNAT family N-acetyltransferase;protein_id=WP_003900617.1;transl_table=11 NZ_KK316848.1 RefSeq gene 262777 263733 . - . ID=gene-AL60_RS12515;Name=fixB;gbkey=Gene;gene=fixB;gene_biotype=protein_coding;locus_tag=AL60_RS12515;old_locus_tag=AL60_01398 NZ_KK316848.1 Protein Homology CDS 262777 263733 . - 0 ID=cds-WP_003899889.1;Parent=gene-AL60_RS12515;Dbxref=GenBank:WP_003899889.1;Name=WP_003899889.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;gene=fixB;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217544.1;locus_tag=AL60_RS12515;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_003899889.1;transl_table=11 NZ_KK316848.1 RefSeq gene 263772 264572 . - . ID=gene-AL60_RS12520;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=AL60_RS12520;old_locus_tag=AL60_01399 NZ_KK316848.1 Protein Homology CDS 263772 264572 . - 0 ID=cds-WP_003415921.1;Parent=gene-AL60_RS12520;Dbxref=GenBank:WP_003415921.1;Name=WP_003415921.1;Ontology_term=GO:0009055;gbkey=CDS;gene=fixA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217545.1;locus_tag=AL60_RS12520;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_003415921.1;transl_table=11 NZ_KK316848.1 RefSeq gene 264803 265627 . + . ID=gene-AL60_RS12525;Name=AL60_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12525;old_locus_tag=AL60_01400 NZ_KK316848.1 Protein Homology CDS 264803 265627 . + 0 ID=cds-WP_003415922.1;Parent=gene-AL60_RS12525;Dbxref=GenBank:WP_003415922.1;Name=WP_003415922.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217546.1;locus_tag=AL60_RS12525;product=class I SAM-dependent methyltransferase;protein_id=WP_003415922.1;transl_table=11 NZ_KK316848.1 RefSeq gene 265624 267204 . + . ID=gene-AL60_RS12530;Name=AL60_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12530;old_locus_tag=AL60_01401 NZ_KK316848.1 Protein Homology CDS 265624 267204 . + 0 ID=cds-WP_003899891.1;Parent=gene-AL60_RS12530;Dbxref=GenBank:WP_003899891.1;Name=WP_003899891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217547.1;locus_tag=AL60_RS12530;product=1%2C4-alpha-glucan branching protein domain-containing protein;protein_id=WP_003899891.1;transl_table=11 NZ_KK316848.1 RefSeq gene 267236 268480 . + . ID=gene-AL60_RS12535;Name=AL60_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12535;old_locus_tag=AL60_01402 NZ_KK316848.1 Protein Homology CDS 267236 268480 . + 0 ID=cds-WP_012054338.1;Parent=gene-AL60_RS12535;Dbxref=GenBank:WP_012054338.1;Name=WP_012054338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217548.1;locus_tag=AL60_RS12535;product=glycogen synthase;protein_id=WP_012054338.1;transl_table=11 NZ_KK316848.1 RefSeq gene 268514 268903 . + . ID=gene-AL60_RS12540;Name=AL60_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12540;old_locus_tag=AL60_01403 NZ_KK316848.1 Protein Homology CDS 268514 268903 . + 0 ID=cds-WP_003415930.1;Parent=gene-AL60_RS12540;Dbxref=GenBank:WP_003415930.1;Name=WP_003415930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837058.1;locus_tag=AL60_RS12540;product=hypothetical protein;protein_id=WP_003415930.1;transl_table=11 NZ_KK316848.1 RefSeq gene 269082 269630 . + . ID=gene-AL60_RS12545;Name=AL60_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12545;old_locus_tag=AL60_01404 NZ_KK316848.1 Protein Homology CDS 269082 269630 . + 0 ID=cds-WP_003415932.1;Parent=gene-AL60_RS12545;Dbxref=GenBank:WP_003415932.1;Name=WP_003415932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217549.1;locus_tag=AL60_RS12545;product=anti-apoptotic protein;protein_id=WP_003415932.1;transl_table=11 NZ_KK316848.1 RefSeq gene 269721 270458 . - . ID=gene-AL60_RS12550;Name=AL60_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12550;old_locus_tag=AL60_01405 NZ_KK316848.1 Protein Homology CDS 269721 270458 . - 0 ID=cds-WP_003415934.1;Parent=gene-AL60_RS12550;Dbxref=GenBank:WP_003415934.1;Name=WP_003415934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288424.1;locus_tag=AL60_RS12550;product=acyltransferase;protein_id=WP_003415934.1;transl_table=11 NZ_KK316848.1 RefSeq gene 270916 272163 . + . ID=gene-AL60_RS12555;Name=AL60_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12555;old_locus_tag=AL60_01406 NZ_KK316848.1 Protein Homology CDS 270916 272163 . + 0 ID=cds-WP_193586988.1;Parent=gene-AL60_RS12555;Dbxref=GenBank:WP_193586988.1;Name=WP_193586988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725741.1;locus_tag=AL60_RS12555;product=outer membrane protein assembly factor BamB family protein;protein_id=WP_193586988.1;transl_table=11 NZ_KK316848.1 RefSeq gene 272160 272843 . - . ID=gene-AL60_RS12560;Name=AL60_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12560;old_locus_tag=AL60_01407 NZ_KK316848.1 Protein Homology CDS 272160 272843 . - 0 ID=cds-WP_003415939.1;Parent=gene-AL60_RS12560;Dbxref=GenBank:WP_003415939.1;Name=WP_003415939.1;Ontology_term=GO:0006629,GO:0008126;gbkey=CDS;go_function=acetylesterase activity|0008126||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217552.1;locus_tag=AL60_RS12560;product=esterase;protein_id=WP_003415939.1;transl_table=11 NZ_KK316848.1 RefSeq gene 272916 274130 . - . ID=gene-AL60_RS12565;Name=AL60_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12565;old_locus_tag=AL60_01408 NZ_KK316848.1 Protein Homology CDS 272916 274130 . - 0 ID=cds-WP_014585367.1;Parent=gene-AL60_RS12565;Dbxref=GenBank:WP_014585367.1;Name=WP_014585367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008259139.1;locus_tag=AL60_RS12565;product=class I SAM-dependent methyltransferase;protein_id=WP_014585367.1;transl_table=11 NZ_KK316848.1 RefSeq gene 274127 275110 . - . ID=gene-AL60_RS12570;Name=AL60_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12570;old_locus_tag=AL60_01409 NZ_KK316848.1 Protein Homology CDS 274127 275110 . - 0 ID=cds-WP_003415941.1;Parent=gene-AL60_RS12570;Dbxref=GenBank:WP_003415941.1;Name=WP_003415941.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217554.1;locus_tag=AL60_RS12570;product=class I SAM-dependent methyltransferase;protein_id=WP_003415941.1;transl_table=11 NZ_KK316848.1 RefSeq gene 275121 275885 . - . ID=gene-AL60_RS12575;Name=AL60_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12575;old_locus_tag=AL60_01410 NZ_KK316848.1 Protein Homology CDS 275121 275885 . - 0 ID=cds-WP_003415942.1;Parent=gene-AL60_RS12575;Dbxref=GenBank:WP_003415942.1;Name=WP_003415942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217555.1;locus_tag=AL60_RS12575;product=enoyl-CoA hydratase;protein_id=WP_003415942.1;transl_table=11 NZ_KK316848.1 RefSeq gene 275894 276760 . - . ID=gene-AL60_RS12580;Name=AL60_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12580;old_locus_tag=AL60_01411 NZ_KK316848.1 Protein Homology CDS 275894 276760 . - 0 ID=cds-WP_003415943.1;Parent=gene-AL60_RS12580;Dbxref=GenBank:WP_003415943.1;Name=WP_003415943.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217556.1;locus_tag=AL60_RS12580;product=NUDIX hydrolase;protein_id=WP_003415943.1;transl_table=11 NZ_KK316848.1 RefSeq gene 276757 277620 . - . ID=gene-AL60_RS12585;Name=AL60_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12585;old_locus_tag=AL60_01412 NZ_KK316848.1 Protein Homology CDS 276757 277620 . - 0 ID=cds-WP_003415944.1;Parent=gene-AL60_RS12585;Dbxref=GenBank:WP_003415944.1;Name=WP_003415944.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217557.1;locus_tag=AL60_RS12585;product=ABC transporter ATP-binding protein;protein_id=WP_003415944.1;transl_table=11 NZ_KK316848.1 RefSeq gene 277635 278864 . - . ID=gene-AL60_RS12590;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=AL60_RS12590;old_locus_tag=AL60_01413 NZ_KK316848.1 Protein Homology CDS 277635 278864 . - 0 ID=cds-WP_003415945.1;Parent=gene-AL60_RS12590;Dbxref=GenBank:WP_003415945.1;Name=WP_003415945.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217558.1;locus_tag=AL60_RS12590;product=phosphoserine phosphatase SerB;protein_id=WP_003415945.1;transl_table=11 NZ_KK316848.1 RefSeq gene 278902 280623 . - . ID=gene-AL60_RS12595;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=AL60_RS12595;old_locus_tag=AL60_01414 NZ_KK316848.1 Protein Homology CDS 278902 280623 . - 0 ID=cds-WP_003415946.1;Parent=gene-AL60_RS12595;Dbxref=GenBank:WP_003415946.1;Name=WP_003415946.1;gbkey=CDS;gene=ctaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217559.1;locus_tag=AL60_RS12595;product=aa3-type cytochrome oxidase subunit I;protein_id=WP_003415946.1;transl_table=11 NZ_KK316848.1 RefSeq gene 280838 281917 . + . ID=gene-AL60_RS12600;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;locus_tag=AL60_RS12600;old_locus_tag=AL60_01415 NZ_KK316848.1 Protein Homology CDS 280838 281917 . + 0 ID=cds-WP_003415959.1;Parent=gene-AL60_RS12600;Dbxref=GenBank:WP_003415959.1;Name=WP_003415959.1;Ontology_term=GO:0015891,GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;gene=fecB;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217560.1;locus_tag=AL60_RS12600;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_003415959.1;transl_table=11 NZ_KK316848.1 RefSeq gene 281987 283027 . + . ID=gene-AL60_RS12605;Name=adhC;gbkey=Gene;gene=adhC;gene_biotype=protein_coding;locus_tag=AL60_RS12605;old_locus_tag=AL60_01416 NZ_KK316848.1 Protein Homology CDS 281987 283027 . + 0 ID=cds-WP_003415965.1;Parent=gene-AL60_RS12605;Dbxref=GenBank:WP_003415965.1;Name=WP_003415965.1;Ontology_term=GO:0016491;gbkey=CDS;gene=adhC;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217561.1;locus_tag=AL60_RS12605;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_003415965.1;transl_table=11 NZ_KK316848.1 RefSeq gene 283016 283390 . - . ID=gene-AL60_RS12610;Name=AL60_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12610;old_locus_tag=AL60_01417 NZ_KK316848.1 Protein Homology CDS 283016 283390 . - 0 ID=cds-WP_003415968.1;Parent=gene-AL60_RS12610;Dbxref=GenBank:WP_003415968.1;Name=WP_003415968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217562.1;locus_tag=AL60_RS12610;product=DUF3349 domain-containing protein;protein_id=WP_003415968.1;transl_table=11 NZ_KK316848.1 RefSeq gene 283724 284008 . - . ID=gene-AL60_RS12615;Name=AL60_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12615;old_locus_tag=AL60_01418 NZ_KK316848.1 Protein Homology CDS 283724 284008 . - 0 ID=cds-WP_003899894.1;Parent=gene-AL60_RS12615;Dbxref=GenBank:WP_003899894.1;Name=WP_003899894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217563.1;locus_tag=AL60_RS12615;product=hypothetical protein;protein_id=WP_003899894.1;transl_table=11 NZ_KK316848.1 RefSeq gene 284106 285080 . - . ID=gene-AL60_RS12620;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AL60_RS12620;old_locus_tag=AL60_01419 NZ_KK316848.1 Protein Homology CDS 284106 285080 . - 0 ID=cds-WP_003415973.1;Parent=gene-AL60_RS12620;Dbxref=GenBank:WP_003415973.1;Name=WP_003415973.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177921.1;locus_tag=AL60_RS12620;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_003415973.1;transl_table=11 NZ_KK316848.1 RefSeq gene 285211 286785 . - . ID=gene-AL60_RS12625;Name=AL60_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12625;old_locus_tag=AL60_01420 NZ_KK316848.1 Protein Homology CDS 285211 286785 . - 0 ID=cds-WP_003899895.1;Parent=gene-AL60_RS12625;Dbxref=GenBank:WP_003899895.1;Name=WP_003899895.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217565.1;locus_tag=AL60_RS12625;product=flavin-containing monooxygenase;protein_id=WP_003899895.1;transl_table=11 NZ_KK316848.1 RefSeq gene 286919 287659 . - . ID=gene-AL60_RS12630;Name=AL60_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12630;old_locus_tag=AL60_01421 NZ_KK316848.1 Protein Homology CDS 286919 287659 . - 0 ID=cds-WP_003415979.1;Parent=gene-AL60_RS12630;Dbxref=GenBank:WP_003415979.1;Name=WP_003415979.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217566.1;locus_tag=AL60_RS12630;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003415979.1;transl_table=11 NZ_KK316848.1 RefSeq gene 287787 289964 . - . ID=gene-AL60_RS12635;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=AL60_RS12635;old_locus_tag=AL60_01422 NZ_KK316848.1 Protein Homology CDS 287787 289964 . - 0 ID=cds-WP_003914457.1;Parent=gene-AL60_RS12635;Dbxref=GenBank:WP_003914457.1;Name=WP_003914457.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719502.1;locus_tag=AL60_RS12635;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_003914457.1;transl_table=11 NZ_KK316848.1 RefSeq gene 289934 290386 . - . ID=gene-AL60_RS12640;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=AL60_RS12640;old_locus_tag=AL60_01423 NZ_KK316848.1 Protein Homology CDS 289934 290386 . - 0 ID=cds-WP_003415981.1;Parent=gene-AL60_RS12640;Dbxref=GenBank:WP_003415981.1;Name=WP_003415981.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217568.1;locus_tag=AL60_RS12640;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_003415981.1;transl_table=11 NZ_KK316848.1 RefSeq gene 290421 290660 . - . ID=gene-AL60_RS12645;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=AL60_RS12645;old_locus_tag=AL60_01424 NZ_KK316848.1 Protein Homology CDS 290421 290660 . - 0 ID=cds-WP_003415982.1;Parent=gene-AL60_RS12645;Dbxref=GenBank:WP_003415982.1;Name=WP_003415982.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217569.1;locus_tag=AL60_RS12645;product=redoxin NrdH;protein_id=WP_003415982.1;transl_table=11 NZ_KK316848.1 RefSeq gene 291123 291677 . - . ID=gene-AL60_RS12650;Name=AL60_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12650;old_locus_tag=AL60_01425 NZ_KK316848.1 Protein Homology CDS 291123 291677 . - 0 ID=cds-WP_003415983.1;Parent=gene-AL60_RS12650;Dbxref=GenBank:WP_003415983.1;Name=WP_003415983.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217570.1;locus_tag=AL60_RS12650;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_003415983.1;transl_table=11 NZ_KK316848.1 RefSeq gene 291769 292383 . + . ID=gene-AL60_RS12655;Name=AL60_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12655;old_locus_tag=AL60_01426 NZ_KK316848.1 Protein Homology CDS 291769 292383 . + 0 ID=cds-WP_003415984.1;Parent=gene-AL60_RS12655;Dbxref=GenBank:WP_003415984.1;Name=WP_003415984.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217571.1;locus_tag=AL60_RS12655;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003415984.1;transl_table=11 NZ_KK316848.1 RefSeq gene 292393 293433 . + . ID=gene-AL60_RS12660;Name=dinP;gbkey=Gene;gene=dinP;gene_biotype=protein_coding;locus_tag=AL60_RS12660;old_locus_tag=AL60_01427 NZ_KK316848.1 Protein Homology CDS 292393 293433 . + 0 ID=cds-WP_003899898.1;Parent=gene-AL60_RS12660;Dbxref=GenBank:WP_003899898.1;Name=WP_003899898.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinP;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217572.1;locus_tag=AL60_RS12660;product=DNA polymerase IV;protein_id=WP_003899898.1;transl_table=11 NZ_KK316848.1 RefSeq gene 293487 294350 . - . ID=gene-AL60_RS12665;Name=AL60_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12665;old_locus_tag=AL60_01428 NZ_KK316848.1 Protein Homology CDS 293487 294350 . - 0 ID=cds-WP_003906972.1;Parent=gene-AL60_RS12665;Dbxref=GenBank:WP_003906972.1;Name=WP_003906972.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217573.1;locus_tag=AL60_RS12665;product=SDR family oxidoreductase;protein_id=WP_003906972.1;transl_table=11 NZ_KK316848.1 RefSeq gene 294414 295064 . - . ID=gene-AL60_RS12670;Name=AL60_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12670;old_locus_tag=AL60_01429 NZ_KK316848.1 Protein Homology CDS 294414 295064 . - 0 ID=cds-WP_003415987.1;Parent=gene-AL60_RS12670;Dbxref=GenBank:WP_003415987.1;Name=WP_003415987.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217574.1;locus_tag=AL60_RS12670;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003415987.1;transl_table=11 NZ_KK316848.1 RefSeq gene 295180 296658 . + . ID=gene-AL60_RS12675;Name=AL60_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12675;old_locus_tag=AL60_01430 NZ_KK316848.1 Protein Homology CDS 295180 296658 . + 0 ID=cds-WP_003899900.1;Parent=gene-AL60_RS12675;Dbxref=GenBank:WP_003899900.1;Name=WP_003899900.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217575.1;locus_tag=AL60_RS12675;product=cytochrome P450;protein_id=WP_003899900.1;transl_table=11 NZ_KK316848.1 RefSeq gene 297429 298901 . - . ID=gene-AL60_RS12680;Name=AL60_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12680;old_locus_tag=AL60_01431 NZ_KK316848.1 Protein Homology CDS 297429 298901 . - 0 ID=cds-WP_003415989.1;Parent=gene-AL60_RS12680;Dbxref=GenBank:WP_003415989.1;Name=WP_003415989.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217576.1;locus_tag=AL60_RS12680;product=FadR/GntR family transcriptional regulator;protein_id=WP_003415989.1;transl_table=11 NZ_KK316848.1 RefSeq gene 299018 301183 . - . ID=gene-AL60_RS12685;Name=AL60_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12685;old_locus_tag=AL60_01432 NZ_KK316848.1 Protein Homology CDS 299018 301183 . - 0 ID=cds-WP_003902404.1;Parent=gene-AL60_RS12685;Dbxref=GenBank:WP_003902404.1;Name=WP_003902404.1;Ontology_term=GO:0006631,GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217577.1;locus_tag=AL60_RS12685;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003902404.1;transl_table=11 NZ_KK316848.1 RefSeq gene 301340 302863 . + . ID=gene-AL60_RS12690;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=AL60_RS12690;old_locus_tag=AL60_01433 NZ_KK316848.1 Protein Homology CDS 301340 302863 . + 0 ID=cds-WP_003415991.1;Parent=gene-AL60_RS12690;Dbxref=GenBank:WP_003415991.1;Name=WP_003415991.1;Ontology_term=GO:0006281,GO:0006310,GO:0071897,GO:0003677,GO:0003910,GO:0005524;gbkey=CDS;gene=ligB;go_function=DNA binding|0003677||IEA,DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA biosynthetic process|0071897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217578.1;locus_tag=AL60_RS12690;product=ATP-dependent DNA ligase;protein_id=WP_003415991.1;transl_table=11 NZ_KK316848.1 RefSeq gene 302999 305275 . + . ID=gene-AL60_RS12695;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=AL60_RS12695;old_locus_tag=AL60_01434 NZ_KK316848.1 Protein Homology CDS 302999 305275 . + 0 ID=cds-WP_003906973.1;Parent=gene-AL60_RS12695;Dbxref=GenBank:WP_003906973.1;Name=WP_003906973.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;gene=cstA;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217579.1;locus_tag=AL60_RS12695;product=carbon starvation CstA family protein;protein_id=WP_003906973.1;transl_table=11 NZ_KK316848.1 RefSeq gene 305581 306006 . - . ID=gene-AL60_RS12700;Name=AL60_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12700;old_locus_tag=AL60_01435 NZ_KK316848.1 Protein Homology CDS 305581 306006 . - 0 ID=cds-WP_003415994.1;Parent=gene-AL60_RS12700;Dbxref=GenBank:WP_003415994.1;Name=WP_003415994.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217580.1;locus_tag=AL60_RS12700;product=DoxX family protein;protein_id=WP_003415994.1;transl_table=11 NZ_KK316848.1 RefSeq gene 306143 306466 . + . ID=gene-AL60_RS12705;Name=mmr;gbkey=Gene;gene=mmr;gene_biotype=protein_coding;locus_tag=AL60_RS12705;old_locus_tag=AL60_01436 NZ_KK316848.1 Protein Homology CDS 306143 306466 . + 0 ID=cds-WP_003415995.1;Parent=gene-AL60_RS12705;Dbxref=GenBank:WP_003415995.1;Name=WP_003415995.1;gbkey=CDS;gene=mmr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177922.1;locus_tag=AL60_RS12705;product=multidrug efflux SMR transporter Mmr;protein_id=WP_003415995.1;transl_table=11 NZ_KK316848.1 RefSeq gene 306463 307071 . + . ID=gene-AL60_RS12710;Name=AL60_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12710;old_locus_tag=AL60_01437 NZ_KK316848.1 Protein Homology CDS 306463 307071 . + 0 ID=cds-WP_003416005.1;Parent=gene-AL60_RS12710;Dbxref=GenBank:WP_003416005.1;Name=WP_003416005.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217582.1;locus_tag=AL60_RS12710;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416005.1;transl_table=11 NZ_KK316848.1 RefSeq gene 307049 307594 . + . ID=gene-AL60_RS12715;Name=AL60_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12715;old_locus_tag=AL60_01438 NZ_KK316848.1 Protein Homology CDS 307049 307594 . + 0 ID=cds-WP_003917120.1;Parent=gene-AL60_RS12715;Dbxref=GenBank:WP_003917120.1;Name=WP_003917120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385303.1;locus_tag=AL60_RS12715;product=DUF732 domain-containing protein;protein_id=WP_003917120.1;transl_table=11 NZ_KK316848.1 RefSeq gene 307596 307668 . - . ID=gene-AL60_RS12720;Name=AL60_RS12720;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS12720;old_locus_tag=AL60_01439 NZ_KK316848.1 tRNAscan-SE tRNA 307596 307668 . - . ID=rna-AL60_RS12720;Parent=gene-AL60_RS12720;anticodon=(pos:complement(307633..307635));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS12720;product=tRNA-Ala NZ_KK316848.1 tRNAscan-SE exon 307596 307668 . - . ID=exon-AL60_RS12720-1;Parent=rna-AL60_RS12720;anticodon=(pos:complement(307633..307635));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS12720;product=tRNA-Ala NZ_KK316848.1 RefSeq gene 307735 309378 . - . ID=gene-AL60_RS12725;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=AL60_RS12725;old_locus_tag=AL60_01440 NZ_KK316848.1 Protein Homology CDS 307735 309378 . - 0 ID=cds-WP_003899902.1;Parent=gene-AL60_RS12725;Dbxref=GenBank:WP_003899902.1;Name=WP_003899902.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217584.1;locus_tag=AL60_RS12725;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_003899902.1;transl_table=11 NZ_KK316848.1 RefSeq gene 309448 309846 . + . ID=gene-AL60_RS12730;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AL60_RS12730;old_locus_tag=AL60_01441 NZ_KK316848.1 Protein Homology CDS 309448 309846 . + 0 ID=cds-WP_003416045.1;Parent=gene-AL60_RS12730;Dbxref=GenBank:WP_003416045.1;Name=WP_003416045.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217585.1;locus_tag=AL60_RS12730;product=fluoride efflux transporter CrcB;protein_id=WP_003416045.1;transl_table=11 NZ_KK316848.1 RefSeq gene 309843 310223 . + . ID=gene-AL60_RS12735;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AL60_RS12735;old_locus_tag=AL60_01442 NZ_KK316848.1 Protein Homology CDS 309843 310223 . + 0 ID=cds-WP_003416046.1;Parent=gene-AL60_RS12735;Dbxref=GenBank:WP_003416046.1;Name=WP_003416046.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217586.1;locus_tag=AL60_RS12735;product=fluoride efflux transporter CrcB;protein_id=WP_003416046.1;transl_table=11 NZ_KK316848.1 RefSeq gene 310220 311329 . + . ID=gene-AL60_RS12740;Name=AL60_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12740;old_locus_tag=AL60_01443 NZ_KK316848.1 Protein Homology CDS 310220 311329 . + 0 ID=cds-WP_003901532.1;Parent=gene-AL60_RS12740;Dbxref=GenBank:WP_003901532.1;Name=WP_003901532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217587.1;locus_tag=AL60_RS12740;product=DUF190 domain-containing protein;protein_id=WP_003901532.1;transl_table=11 NZ_KK316848.1 RefSeq pseudogene 311474 312069 . - . ID=gene-AL60_RS27905;Name=AL60_RS27905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27905;old_locus_tag=AL60_01444;pseudo=true NZ_KK316848.1 Protein Homology CDS 311474 312069 . - 0 ID=cds-AL60_RS27905;Parent=gene-AL60_RS27905;Note=frameshifted;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: protein motif:HMM:NF012517.6;locus_tag=AL60_RS27905;product=LLM class flavin-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_KK316848.1 RefSeq gene 312085 312441 . - . ID=gene-AL60_RS12750;Name=AL60_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12750;old_locus_tag=AL60_01445 NZ_KK316848.1 Protein Homology CDS 312085 312441 . - 0 ID=cds-WP_003416050.1;Parent=gene-AL60_RS12750;Dbxref=GenBank:WP_003416050.1;Name=WP_003416050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217589.1;locus_tag=AL60_RS12750;product=DUF488 domain-containing protein;protein_id=WP_003416050.1;transl_table=11 NZ_KK316848.1 RefSeq gene 312535 313809 . + . ID=gene-AL60_RS12755;Name=AL60_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12755;old_locus_tag=AL60_01446 NZ_KK316848.1 Protein Homology CDS 312535 313809 . + 0 ID=cds-WP_003416051.1;Parent=gene-AL60_RS12755;Dbxref=GenBank:WP_003416051.1;Name=WP_003416051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217590.1;locus_tag=AL60_RS12755;product=HNH endonuclease;protein_id=WP_003416051.1;transl_table=11 NZ_KK316848.1 RefSeq gene 313806 314729 . - . ID=gene-AL60_RS12760;Name=AL60_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12760;old_locus_tag=AL60_01447 NZ_KK316848.1 Protein Homology CDS 313806 314729 . - 0 ID=cds-WP_003416052.1;Parent=gene-AL60_RS12760;Dbxref=GenBank:WP_003416052.1;Name=WP_003416052.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217591.1;locus_tag=AL60_RS12760;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_003416052.1;transl_table=11 NZ_KK316848.1 RefSeq gene 314828 315304 . + . ID=gene-AL60_RS12765;Name=AL60_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12765;old_locus_tag=AL60_01448 NZ_KK316848.1 Protein Homology CDS 314828 315304 . + 0 ID=cds-WP_003416053.1;Parent=gene-AL60_RS12765;Dbxref=GenBank:WP_003416053.1;Name=WP_003416053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217592.1;locus_tag=AL60_RS12765;product=SRPBCC family protein;protein_id=WP_003416053.1;transl_table=11 NZ_KK316848.1 RefSeq gene 315297 317108 . + . ID=gene-AL60_RS12770;Name=AL60_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12770;old_locus_tag=AL60_01449 NZ_KK316848.1 Protein Homology CDS 315297 317108 . + 0 ID=cds-WP_003901535.1;Parent=gene-AL60_RS12770;Dbxref=GenBank:WP_003901535.1;Name=WP_003901535.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177923.1;locus_tag=AL60_RS12770;product=sulfatase-like hydrolase/transferase;protein_id=WP_003901535.1;transl_table=11 NZ_KK316848.1 RefSeq gene 317109 317510 . + . ID=gene-AL60_RS12775;Name=hab;gbkey=Gene;gene=hab;gene_biotype=protein_coding;locus_tag=AL60_RS12775;old_locus_tag=AL60_01450 NZ_KK316848.1 Protein Homology CDS 317109 317510 . + 0 ID=cds-WP_003416059.1;Parent=gene-AL60_RS12775;Dbxref=GenBank:WP_003416059.1;Name=WP_003416059.1;gbkey=CDS;gene=hab;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217594.1;locus_tag=AL60_RS12775;product=styrene oxide isomerase;protein_id=WP_003416059.1;transl_table=11 NZ_KK316848.1 RefSeq gene 317526 318353 . - . ID=gene-AL60_RS12780;Name=AL60_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12780;old_locus_tag=AL60_01451 NZ_KK316848.1 Protein Homology CDS 317526 318353 . - 0 ID=cds-WP_003416061.1;Parent=gene-AL60_RS12780;Dbxref=GenBank:WP_003416061.1;Name=WP_003416061.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217595.1;locus_tag=AL60_RS12780;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003416061.1;transl_table=11 NZ_KK316848.1 RefSeq gene 318412 321744 . - . ID=gene-AL60_RS12785;Name=pknK;gbkey=Gene;gene=pknK;gene_biotype=protein_coding;locus_tag=AL60_RS12785;old_locus_tag=AL60_01452 NZ_KK316848.1 Protein Homology CDS 318412 321744 . - 0 ID=cds-WP_003899905.1;Parent=gene-AL60_RS12785;Dbxref=GenBank:WP_003899905.1;Name=WP_003899905.1;gbkey=CDS;gene=pknK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217596.1;locus_tag=AL60_RS12785;product=serine/threonine protein kinase PknK;protein_id=WP_003899905.1;transl_table=11 NZ_KK316848.1 RefSeq gene 321796 323034 . + . ID=gene-AL60_RS12790;Name=AL60_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12790;old_locus_tag=AL60_01453 NZ_KK316848.1 Protein Homology CDS 321796 323034 . + 0 ID=cds-WP_003416066.1;Parent=gene-AL60_RS12790;Dbxref=GenBank:WP_003416066.1;Name=WP_003416066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217597.1;locus_tag=AL60_RS12790;product=nucleotidyltransferase;protein_id=WP_003416066.1;transl_table=11 NZ_KK316848.1 RefSeq gene 323160 324182 . - . ID=gene-AL60_RS12795;Name=virS;gbkey=Gene;gene=virS;gene_biotype=protein_coding;locus_tag=AL60_RS12795;old_locus_tag=AL60_01454 NZ_KK316848.1 Protein Homology CDS 323160 324182 . - 0 ID=cds-WP_003416068.1;Parent=gene-AL60_RS12795;Dbxref=GenBank:WP_003416068.1;Name=WP_003416068.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=virS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217598.1;locus_tag=AL60_RS12795;product=AraC family transcriptional regulator;protein_id=WP_003416068.1;transl_table=11 NZ_KK316848.1 RefSeq gene 324260 325747 . + . ID=gene-AL60_RS12800;Name=AL60_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12800;old_locus_tag=AL60_01455 NZ_KK316848.1 Protein Homology CDS 324260 325747 . + 0 ID=cds-WP_003899906.1;Parent=gene-AL60_RS12800;Dbxref=GenBank:WP_003899906.1;Name=WP_003899906.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217599.1;locus_tag=AL60_RS12800;product=flavin-containing monooxygenase;protein_id=WP_003899906.1;transl_table=11 NZ_KK316848.1 RefSeq gene 325753 326679 . + . ID=gene-AL60_RS12805;Name=lipR;gbkey=Gene;gene=lipR;gene_biotype=protein_coding;locus_tag=AL60_RS12805;old_locus_tag=AL60_01456 NZ_KK316848.1 Protein Homology CDS 325753 326679 . + 0 ID=cds-WP_003901538.1;Parent=gene-AL60_RS12805;Dbxref=GenBank:WP_003901538.1;Name=WP_003901538.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipR;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217600.1;locus_tag=AL60_RS12805;product=alpha/beta hydrolase;protein_id=WP_003901538.1;transl_table=11 NZ_KK316848.1 RefSeq gene 326676 327506 . + . ID=gene-AL60_RS12810;Name=AL60_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12810;old_locus_tag=AL60_01457 NZ_KK316848.1 Protein Homology CDS 326676 327506 . + 0 ID=cds-WP_012054339.1;Parent=gene-AL60_RS12810;Dbxref=GenBank:WP_012054339.1;Name=WP_012054339.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217601.1;locus_tag=AL60_RS12810;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_012054339.1;transl_table=11 NZ_KK316848.1 RefSeq gene 327537 328643 . + . ID=gene-AL60_RS12815;Name=adhD;gbkey=Gene;gene=adhD;gene_biotype=protein_coding;locus_tag=AL60_RS12815;old_locus_tag=AL60_01458 NZ_KK316848.1 Protein Homology CDS 327537 328643 . + 0 ID=cds-WP_003416075.1;Parent=gene-AL60_RS12815;Dbxref=GenBank:WP_003416075.1;Name=WP_003416075.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;gene=adhD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217602.1;locus_tag=AL60_RS12815;product=NDMA-dependent alcohol dehydrogenase;protein_id=WP_003416075.1;transl_table=11 NZ_KK316848.1 RefSeq gene 328681 330099 . + . ID=gene-AL60_RS12820;Name=AL60_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12820;old_locus_tag=AL60_01459 NZ_KK316848.1 Protein Homology CDS 328681 330099 . + 0 ID=cds-WP_003906978.1;Parent=gene-AL60_RS12820;Dbxref=GenBank:WP_003906978.1;Name=WP_003906978.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217603.1;locus_tag=AL60_RS12820;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003906978.1;transl_table=11 NZ_KK316848.1 RefSeq gene 330096 331520 . + . ID=gene-AL60_RS12825;Name=AL60_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12825;old_locus_tag=AL60_01460 NZ_KK316848.1 Protein Homology CDS 330096 331520 . + 0 ID=cds-WP_003416079.1;Parent=gene-AL60_RS12825;Dbxref=GenBank:WP_003416079.1;Name=WP_003416079.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217604.1;locus_tag=AL60_RS12825;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003416079.1;transl_table=11 NZ_KK316848.1 RefSeq gene 331517 333028 . + . ID=gene-AL60_RS12830;Name=fadD13;gbkey=Gene;gene=fadD13;gene_biotype=protein_coding;locus_tag=AL60_RS12830;old_locus_tag=AL60_01461 NZ_KK316848.1 Protein Homology CDS 331517 333028 . + 0 ID=cds-WP_003416081.1;Parent=gene-AL60_RS12830;Dbxref=GenBank:WP_003416081.1;Name=WP_003416081.1;gbkey=CDS;gene=fadD13;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217605.1;locus_tag=AL60_RS12830;product=long-chain-fatty-acid--CoA ligase FadD13;protein_id=WP_003416081.1;transl_table=11 NZ_KK316848.1 RefSeq gene 333967 334854 . + . ID=gene-AL60_RS12835;Name=AL60_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12835;old_locus_tag=AL60_01462 NZ_KK316848.1 Protein Homology CDS 333967 334854 . + 0 ID=cds-WP_012054340.1;Parent=gene-AL60_RS12835;Dbxref=GenBank:WP_012054340.1;Name=WP_012054340.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217606.1;locus_tag=AL60_RS12835;product=Rv3090 family protease;protein_id=WP_012054340.1;transl_table=11 NZ_KK316848.1 RefSeq gene 334872 336563 . + . ID=gene-AL60_RS12840;Name=AL60_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12840;old_locus_tag=AL60_01463 NZ_KK316848.1 Protein Homology CDS 334872 336563 . + 0 ID=cds-WP_003900628.1;Parent=gene-AL60_RS12840;Dbxref=GenBank:WP_003900628.1;Name=WP_003900628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217607.1;locus_tag=AL60_RS12840;product=patatin-like phospholipase family protein;protein_id=WP_003900628.1;transl_table=11 NZ_KK316848.1 RefSeq gene 336570 337490 . - . ID=gene-AL60_RS12845;Name=AL60_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12845;old_locus_tag=AL60_01464 NZ_KK316848.1 Protein Homology CDS 336570 337490 . - 0 ID=cds-WP_003906980.1;Parent=gene-AL60_RS12845;Dbxref=GenBank:WP_003906980.1;Name=WP_003906980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217608.1;locus_tag=AL60_RS12845;product=DUF808 domain-containing protein;protein_id=WP_003906980.1;transl_table=11 NZ_KK316848.1 RefSeq gene 337516 338520 . - . ID=gene-AL60_RS12850;Name=AL60_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12850;old_locus_tag=AL60_01465 NZ_KK316848.1 Protein Homology CDS 337516 338520 . - 0 ID=cds-WP_003416094.1;Parent=gene-AL60_RS12850;Dbxref=GenBank:WP_003416094.1;Name=WP_003416094.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217609.1;locus_tag=AL60_RS12850;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003416094.1;transl_table=11 NZ_KK316848.1 RefSeq gene 338517 339647 . - . ID=gene-AL60_RS12855;Name=AL60_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12855;old_locus_tag=AL60_01466 NZ_KK316848.1 Protein Homology CDS 338517 339647 . - 0 ID=cds-WP_003416097.1;Parent=gene-AL60_RS12855;Dbxref=GenBank:WP_003416097.1;Name=WP_003416097.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217610.1;locus_tag=AL60_RS12855;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003416097.1;transl_table=11 NZ_KK316848.1 RefSeq gene 339729 340205 . + . ID=gene-AL60_RS12860;Name=AL60_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12860;old_locus_tag=AL60_01467 NZ_KK316848.1 Protein Homology CDS 339729 340205 . + 0 ID=cds-WP_003416099.1;Parent=gene-AL60_RS12860;Dbxref=GenBank:WP_003416099.1;Name=WP_003416099.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217611.1;locus_tag=AL60_RS12860;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_003416099.1;transl_table=11 NZ_KK316848.1 RefSeq gene 340303 341442 . + . ID=gene-AL60_RS12865;Name=AL60_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12865;old_locus_tag=AL60_01468 NZ_KK316848.1 Protein Homology CDS 340303 341442 . + 0 ID=cds-WP_003899909.1;Parent=gene-AL60_RS12865;Dbxref=GenBank:WP_003899909.1;Name=WP_003899909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217612.1;locus_tag=AL60_RS12865;product=glycoside hydrolase 5 family protein;protein_id=WP_003899909.1;transl_table=11 NZ_KK316848.1 RefSeq gene 341534 342847 . - . ID=gene-AL60_RS12870;Name=lipY;gbkey=Gene;gene=lipY;gene_biotype=protein_coding;locus_tag=AL60_RS12870;old_locus_tag=AL60_01469 NZ_KK316848.1 Protein Homology CDS 341534 342847 . - 0 ID=cds-WP_003912072.1;Parent=gene-AL60_RS12870;Dbxref=GenBank:WP_003912072.1;Name=WP_003912072.1;gbkey=CDS;gene=lipY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177924.1;locus_tag=AL60_RS12870;product=triacylglycerol lipase LipY;protein_id=WP_003912072.1;transl_table=11 NZ_KK316848.1 RefSeq gene 342966 343418 . - . ID=gene-AL60_RS25815;Name=AL60_RS25815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25815;old_locus_tag=AL60_01470 NZ_KK316848.1 Protein Homology CDS 342966 343418 . - 0 ID=cds-WP_003899911.1;Parent=gene-AL60_RS25815;Dbxref=GenBank:WP_003899911.1;Name=WP_003899911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217614.1;locus_tag=AL60_RS25815;product=hypothetical protein;protein_id=WP_003899911.1;transl_table=11 NZ_KK316848.1 RefSeq gene 343362 343682 . + . ID=gene-AL60_RS12880;Name=pemK;gbkey=Gene;gene=pemK;gene_biotype=protein_coding;locus_tag=AL60_RS12880;old_locus_tag=AL60_01472 NZ_KK316848.1 Protein Homology CDS 343362 343682 . + 0 ID=cds-WP_003416110.1;Parent=gene-AL60_RS12880;Dbxref=GenBank:WP_003416110.1;Name=WP_003416110.1;gbkey=CDS;gene=pemK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411812.1;locus_tag=AL60_RS12880;product=type II toxin-antitoxin system toxin endoribonuclease PemK;protein_id=WP_003416110.1;transl_table=11 NZ_KK316848.1 RefSeq gene 343723 344090 . - . ID=gene-AL60_RS25820;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=AL60_RS25820 NZ_KK316848.1 cmsearch tmRNA 343723 344090 . - . ID=rna-AL60_RS25820;Parent=gene-AL60_RS25820;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL60_RS25820;product=transfer-messenger RNA NZ_KK316848.1 cmsearch exon 343723 344090 . - . ID=exon-AL60_RS25820-1;Parent=rna-AL60_RS25820;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL60_RS25820;product=transfer-messenger RNA NZ_KK316848.1 RefSeq gene 344169 345020 . - . ID=gene-AL60_RS12885;Name=AL60_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12885;old_locus_tag=AL60_01473 NZ_KK316848.1 Protein Homology CDS 344169 345020 . - 0 ID=cds-WP_003416111.1;Parent=gene-AL60_RS12885;Dbxref=GenBank:WP_003416111.1;Name=WP_003416111.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217615.1;locus_tag=AL60_RS12885;product=maleylpyruvate isomerase family mycothiol-dependent enzyme;protein_id=WP_003416111.1;transl_table=11 NZ_KK316848.1 RefSeq gene 345057 345539 . - . ID=gene-AL60_RS12890;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AL60_RS12890;old_locus_tag=AL60_01474 NZ_KK316848.1 Protein Homology CDS 345057 345539 . - 0 ID=cds-WP_003416113.1;Parent=gene-AL60_RS12890;Dbxref=GenBank:WP_003416113.1;Name=WP_003416113.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217616.1;locus_tag=AL60_RS12890;product=SsrA-binding protein SmpB;protein_id=WP_003416113.1;transl_table=11 NZ_KK316848.1 RefSeq gene 345542 346435 . - . ID=gene-AL60_RS12895;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=AL60_RS12895;old_locus_tag=AL60_01475 NZ_KK316848.1 Protein Homology CDS 345542 346435 . - 0 ID=cds-WP_003416117.1;Parent=gene-AL60_RS12895;Dbxref=GenBank:WP_003416117.1;Name=WP_003416117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ftsX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217617.1;locus_tag=AL60_RS12895;product=permease-like cell division protein FtsX;protein_id=WP_003416117.1;transl_table=11 NZ_KK316848.1 RefSeq gene 346436 347125 . - . ID=gene-AL60_RS12900;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=AL60_RS12900;old_locus_tag=AL60_01476 NZ_KK316848.1 Protein Homology CDS 346436 347125 . - 0 ID=cds-WP_003416120.1;Parent=gene-AL60_RS12900;Dbxref=GenBank:WP_003416120.1;Name=WP_003416120.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217618.1;locus_tag=AL60_RS12900;product=cell division ATP-binding protein FtsE;protein_id=WP_003416120.1;transl_table=11 NZ_KK316848.1 RefSeq gene 347169 347606 . - . ID=gene-AL60_RS12905;Name=AL60_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12905;old_locus_tag=AL60_01477 NZ_KK316848.1 Protein Homology CDS 347169 347606 . - 0 ID=cds-WP_003416124.1;Parent=gene-AL60_RS12905;Dbxref=GenBank:WP_003416124.1;Name=WP_003416124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217619.1;locus_tag=AL60_RS12905;product=Rv3103c family proline-rich protein;protein_id=WP_003416124.1;transl_table=11 NZ_KK316848.1 RefSeq gene 347608 348534 . - . ID=gene-AL60_RS12910;Name=AL60_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12910;old_locus_tag=AL60_01478 NZ_KK316848.1 Protein Homology CDS 347608 348534 . - 0 ID=cds-WP_003416127.1;Parent=gene-AL60_RS12910;Dbxref=GenBank:WP_003416127.1;Name=WP_003416127.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217620.1;locus_tag=AL60_RS12910;product=mechanosensitive ion channel family protein;protein_id=WP_003416127.1;transl_table=11 NZ_KK316848.1 RefSeq gene 348524 349639 . - . ID=gene-AL60_RS12915;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AL60_RS12915;old_locus_tag=AL60_01479 NZ_KK316848.1 Protein Homology CDS 348524 349639 . - 0 ID=cds-WP_003416129.1;Parent=gene-AL60_RS12915;Dbxref=GenBank:WP_003416129.1;Name=WP_003416129.1;Ontology_term=GO:0006415,GO:0016149,GO:0005737;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725809.1;locus_tag=AL60_RS12915;product=peptide chain release factor 2;protein_id=WP_003416129.1;transl_table=11 NZ_KK316848.1 RefSeq gene 349764 351134 . + . ID=gene-AL60_RS12920;Name=fprA;gbkey=Gene;gene=fprA;gene_biotype=protein_coding;locus_tag=AL60_RS12920;old_locus_tag=AL60_01480 NZ_KK316848.1 Protein Homology CDS 349764 351134 . + 0 ID=cds-WP_003900632.1;Parent=gene-AL60_RS12920;Dbxref=GenBank:WP_003900632.1;Name=WP_003900632.1;gbkey=CDS;gene=fprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217622.1;locus_tag=AL60_RS12920;product=ferredoxin--NADP(+) reductase FprA;protein_id=WP_003900632.1;transl_table=11 NZ_KK316848.1 RefSeq gene 351135 352718 . - . ID=gene-AL60_RS12925;Name=agpS;gbkey=Gene;gene=agpS;gene_biotype=protein_coding;locus_tag=AL60_RS12925;old_locus_tag=AL60_01481 NZ_KK316848.1 Protein Homology CDS 351135 352718 . - 0 ID=cds-WP_003899914.1;Parent=gene-AL60_RS12925;Dbxref=GenBank:WP_003899914.1;Name=WP_003899914.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=agpS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217623.1;locus_tag=AL60_RS12925;product=FAD-binding oxidoreductase;protein_id=WP_003899914.1;transl_table=11 NZ_KK316848.1 RefSeq gene 352729 352932 . - . ID=gene-AL60_RS27095;Name=AL60_RS27095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27095 NZ_KK316848.1 Protein Homology CDS 352729 352932 . - 0 ID=cds-WP_003913800.1;Parent=gene-AL60_RS27095;Dbxref=GenBank:WP_003913800.1;Name=WP_003913800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913800.1;locus_tag=AL60_RS27095;product=hypothetical protein;protein_id=WP_003913800.1;transl_table=11 NZ_KK316848.1 RefSeq gene 353406 354485 . + . ID=gene-AL60_RS12930;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AL60_RS12930;old_locus_tag=AL60_01483 NZ_KK316848.1 Protein Homology CDS 353406 354485 . + 0 ID=cds-WP_003900633.1;Parent=gene-AL60_RS12930;Dbxref=GenBank:WP_003900633.1;Name=WP_003900633.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177925.1;locus_tag=AL60_RS12930;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_003900633.1;transl_table=11 NZ_KK316848.1 RefSeq gene 354536 354931 . + . ID=gene-AL60_RS12935;Name=AL60_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12935;old_locus_tag=AL60_01484 NZ_KK316848.1 Protein Homology CDS 354536 354931 . + 0 ID=cds-WP_003416149.1;Parent=gene-AL60_RS12935;Dbxref=GenBank:WP_003416149.1;Name=WP_003416149.1;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177926.1;locus_tag=AL60_RS12935;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_003416149.1;transl_table=11 NZ_KK316848.1 RefSeq gene 354928 355440 . + . ID=gene-AL60_RS12940;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AL60_RS12940;old_locus_tag=AL60_01485 NZ_KK316848.1 Protein Homology CDS 354928 355440 . + 0 ID=cds-WP_003899917.1;Parent=gene-AL60_RS12940;Dbxref=GenBank:WP_003899917.1;Name=WP_003899917.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177927.1;locus_tag=AL60_RS12940;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_003899917.1;transl_table=11 NZ_KK316848.1 RefSeq gene 355457 355708 . + . ID=gene-AL60_RS12945;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AL60_RS12945;old_locus_tag=AL60_01486 NZ_KK316848.1 Protein Homology CDS 355457 355708 . + 0 ID=cds-WP_003899918.1;Parent=gene-AL60_RS12945;Dbxref=GenBank:WP_003899918.1;Name=WP_003899918.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177928.1;locus_tag=AL60_RS12945;product=molybdopterin converting factor subunit 1;protein_id=WP_003899918.1;transl_table=11 NZ_KK316848.1 RefSeq pseudogene 355831 356130 . + . ID=gene-AL60_RS0104550;Name=AL60_RS0104550;end_range=356130,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0104550;partial=true;pseudo=true NZ_KK316848.1 Protein Homology CDS 355831 356130 . + 0 ID=cds-AL60_RS0104550;Parent=gene-AL60_RS0104550;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016787;end_range=356130,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217629.1;locus_tag=AL60_RS0104550;partial=true;product=HAD family hydrolase;pseudo=true;transl_table=11 ##sequence-region NZ_KK316849.1 1 343618 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316849.1 RefSeq region 1 343618 . + . ID=NZ_KK316849.1:1..343618;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316849.1 RefSeq gene 1 1001 . - . ID=gene-AL60_RS0104560;Name=AL60_RS0104560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104560;partial=true;start_range=.,1 NZ_KK316849.1 Protein Homology CDS 1 1001 . - 0 ID=cds-WP_031685272.1;Parent=gene-AL60_RS0104560;Dbxref=GenBank:WP_031685272.1;Name=WP_031685272.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177812.1;locus_tag=AL60_RS0104560;partial=true;product=PE family protein;protein_id=WP_031685272.1;start_range=.,1;transl_table=11 NZ_KK316849.1 RefSeq gene 1403 2329 . + . ID=gene-AL60_RS12950;Name=ctaB;gbkey=Gene;gene=ctaB;gene_biotype=protein_coding;locus_tag=AL60_RS12950;old_locus_tag=AL60_01487 NZ_KK316849.1 Protein Homology CDS 1403 2329 . + 0 ID=cds-WP_003898882.1;Parent=gene-AL60_RS12950;Dbxref=GenBank:WP_003898882.1;Name=WP_003898882.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=ctaB;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215967.1;locus_tag=AL60_RS12950;product=heme o synthase;protein_id=WP_003898882.1;transl_table=11 NZ_KK316849.1 RefSeq gene 2378 4603 . - . ID=gene-AL60_RS12955;Name=AL60_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12955;old_locus_tag=AL60_01488 NZ_KK316849.1 Protein Homology CDS 2378 4603 . - 0 ID=cds-WP_031721495.1;Parent=gene-AL60_RS12955;Dbxref=GenBank:WP_031721495.1;Name=WP_031721495.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177813.1;locus_tag=AL60_RS12955;product=PE family protein;protein_id=WP_031721495.1;transl_table=11 NZ_KK316849.1 RefSeq gene 4755 6020 . + . ID=gene-AL60_RS12960;Name=AL60_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12960;old_locus_tag=AL60_01489 NZ_KK316849.1 Protein Homology CDS 4755 6020 . + 0 ID=cds-WP_003904629.1;Parent=gene-AL60_RS12960;Dbxref=GenBank:WP_003904629.1;Name=WP_003904629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215969.2;locus_tag=AL60_RS12960;product=Rv1453 family transcriptional regulator;protein_id=WP_003904629.1;transl_table=11 NZ_KK316849.1 RefSeq gene 6048 7034 . - . ID=gene-AL60_RS12965;Name=qor;gbkey=Gene;gene=qor;gene_biotype=protein_coding;locus_tag=AL60_RS12965;old_locus_tag=AL60_01490 NZ_KK316849.1 Protein Homology CDS 6048 7034 . - 0 ID=cds-WP_003407462.1;Parent=gene-AL60_RS12965;Dbxref=GenBank:WP_003407462.1;Name=WP_003407462.1;Ontology_term=GO:0003960,GO:0070402;gbkey=CDS;gene=qor;go_function=NADPH:quinone reductase activity|0003960||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215970.1;locus_tag=AL60_RS12965;product=quinone oxidoreductase family protein;protein_id=WP_003407462.1;transl_table=11 NZ_KK316849.1 RefSeq gene 7054 7917 . + . ID=gene-AL60_RS12970;Name=AL60_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12970;old_locus_tag=AL60_01491 NZ_KK316849.1 Protein Homology CDS 7054 7917 . + 0 ID=cds-WP_003900341.1;Parent=gene-AL60_RS12970;Dbxref=GenBank:WP_003900341.1;Name=WP_003900341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215971.1;locus_tag=AL60_RS12970;product=ATP-grasp domain-containing protein;protein_id=WP_003900341.1;transl_table=11 NZ_KK316849.1 RefSeq gene 7867 8799 . - . ID=gene-AL60_RS12975;Name=AL60_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12975;old_locus_tag=AL60_01492 NZ_KK316849.1 Protein Homology CDS 7867 8799 . - 0 ID=cds-WP_003407466.1;Parent=gene-AL60_RS12975;Dbxref=GenBank:WP_003407466.1;Name=WP_003407466.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215972.1;locus_tag=AL60_RS12975;product=COX15/CtaA family protein;protein_id=WP_003407466.1;transl_table=11 NZ_KK316849.1 RefSeq gene 8911 9696 . - . ID=gene-AL60_RS12980;Name=AL60_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12980;old_locus_tag=AL60_01493 NZ_KK316849.1 Protein Homology CDS 8911 9696 . - 0 ID=cds-WP_003407475.1;Parent=gene-AL60_RS12980;Dbxref=GenBank:WP_003407475.1;Name=WP_003407475.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215973.1;locus_tag=AL60_RS12980;product=ABC transporter permease;protein_id=WP_003407475.1;transl_table=11 NZ_KK316849.1 RefSeq gene 9693 10634 . - . ID=gene-AL60_RS12985;Name=AL60_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS12985;old_locus_tag=AL60_01494 NZ_KK316849.1 Protein Homology CDS 9693 10634 . - 0 ID=cds-WP_003407477.1;Parent=gene-AL60_RS12985;Dbxref=GenBank:WP_003407477.1;Name=WP_003407477.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215974.1;locus_tag=AL60_RS12985;product=ABC transporter ATP-binding protein;protein_id=WP_003407477.1;transl_table=11 NZ_KK316849.1 RefSeq gene 10737 12512 . - . ID=gene-AL60_RS12990;Name=mptB;gbkey=Gene;gene=mptB;gene_biotype=protein_coding;locus_tag=AL60_RS12990;old_locus_tag=AL60_01495 NZ_KK316849.1 Protein Homology CDS 10737 12512 . - 0 ID=cds-WP_003407479.1;Parent=gene-AL60_RS12990;Dbxref=GenBank:WP_003407479.1;Name=WP_003407479.1;gbkey=CDS;gene=mptB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215975.1;locus_tag=AL60_RS12990;product=polyprenol phosphomannose-dependent alpha 1%2C6 mannosyltransferase MptB;protein_id=WP_003407479.1;transl_table=11 NZ_KK316849.1 RefSeq gene 12560 13366 . + . ID=gene-AL60_RS12995;Name=sufR;gbkey=Gene;gene=sufR;gene_biotype=protein_coding;locus_tag=AL60_RS12995;old_locus_tag=AL60_01496 NZ_KK316849.1 Protein Homology CDS 12560 13366 . + 0 ID=cds-WP_003902080.1;Parent=gene-AL60_RS12995;Dbxref=GenBank:WP_003902080.1;Name=WP_003902080.1;gbkey=CDS;gene=sufR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215976.2;locus_tag=AL60_RS12995;product=suf operon transcriptional regulator SufR;protein_id=WP_003902080.1;transl_table=11 NZ_KK316849.1 RefSeq gene 13363 15903 . + . ID=gene-AL60_RS13000;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=AL60_RS13000;old_locus_tag=AL60_01497 NZ_KK316849.1 Protein Homology CDS 13363 15903 . + 0 ID=cds-WP_003407484.1;Parent=gene-AL60_RS13000;Dbxref=GenBank:WP_003407484.1;Name=WP_003407484.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215977.1;locus_tag=AL60_RS13000;product=intein-containing Fe-S cluster assembly protein SufB;protein_id=WP_003407484.1;transl_table=11 NZ_KK316849.1 RefSeq gene 15900 17093 . + . ID=gene-AL60_RS13005;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=AL60_RS13005;old_locus_tag=AL60_01498 NZ_KK316849.1 Protein Homology CDS 15900 17093 . + 0 ID=cds-WP_003407487.1;Parent=gene-AL60_RS13005;Dbxref=GenBank:WP_003407487.1;Name=WP_003407487.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215978.1;locus_tag=AL60_RS13005;product=Fe-S cluster assembly protein SufD;protein_id=WP_003407487.1;transl_table=11 NZ_KK316849.1 RefSeq gene 17090 17890 . + . ID=gene-AL60_RS13010;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AL60_RS13010;old_locus_tag=AL60_01499 NZ_KK316849.1 Protein Homology CDS 17090 17890 . + 0 ID=cds-WP_003407489.1;Parent=gene-AL60_RS13010;Dbxref=GenBank:WP_003407489.1;Name=WP_003407489.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215979.1;locus_tag=AL60_RS13010;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_003407489.1;transl_table=11 NZ_KK316849.1 RefSeq gene 17892 19145 . + . ID=gene-AL60_RS13015;Name=csd;gbkey=Gene;gene=csd;gene_biotype=protein_coding;locus_tag=AL60_RS13015;old_locus_tag=AL60_01500 NZ_KK316849.1 Protein Homology CDS 17892 19145 . + 0 ID=cds-WP_003407490.1;Parent=gene-AL60_RS13015;Dbxref=GenBank:WP_003407490.1;Name=WP_003407490.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=csd;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215980.1;locus_tag=AL60_RS13015;product=cysteine desulfurase;protein_id=WP_003407490.1;transl_table=11 NZ_KK316849.1 RefSeq gene 19142 19630 . + . ID=gene-AL60_RS13020;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=AL60_RS13020;old_locus_tag=AL60_01501 NZ_KK316849.1 Protein Homology CDS 19142 19630 . + 0 ID=cds-WP_003407491.1;Parent=gene-AL60_RS13020;Dbxref=GenBank:WP_003407491.1;Name=WP_003407491.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215981.1;locus_tag=AL60_RS13020;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_003407491.1;transl_table=11 NZ_KK316849.1 RefSeq gene 19605 19952 . + . ID=gene-AL60_RS13025;Name=AL60_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13025;old_locus_tag=AL60_01502 NZ_KK316849.1 Protein Homology CDS 19605 19952 . + 0 ID=cds-WP_003407492.1;Parent=gene-AL60_RS13025;Dbxref=GenBank:WP_003407492.1;Name=WP_003407492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215982.1;locus_tag=AL60_RS13025;product=metal-sulfur cluster assembly factor;protein_id=WP_003407492.1;transl_table=11 NZ_KK316849.1 RefSeq gene 20047 21876 . - . ID=gene-AL60_RS13030;Name=AL60_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13030;old_locus_tag=AL60_01503 NZ_KK316849.1 Protein Homology CDS 20047 21876 . - 0 ID=cds-WP_003900343.1;Parent=gene-AL60_RS13030;Dbxref=GenBank:WP_003900343.1;Name=WP_003900343.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215983.1;locus_tag=AL60_RS13030;product=acyl-CoA dehydrogenase;protein_id=WP_003900343.1;transl_table=11 NZ_KK316849.1 RefSeq gene 21983 23095 . - . ID=gene-AL60_RS13035;Name=AL60_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13035;old_locus_tag=AL60_01504 NZ_KK316849.1 Protein Homology CDS 21983 23095 . - 0 ID=cds-WP_003407494.1;Parent=gene-AL60_RS13035;Dbxref=GenBank:WP_003407494.1;Name=WP_003407494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177814.1;locus_tag=AL60_RS13035;product=PE-PGRS family ubiquitin-binding protein;protein_id=WP_003407494.1;transl_table=11 NZ_KK316849.1 RefSeq gene 23337 25310 . + . ID=gene-AL60_RS13040;Name=ctpD;gbkey=Gene;gene=ctpD;gene_biotype=protein_coding;locus_tag=AL60_RS13040;old_locus_tag=AL60_01505 NZ_KK316849.1 Protein Homology CDS 23337 25310 . + 0 ID=cds-WP_003900344.1;Parent=gene-AL60_RS13040;Dbxref=GenBank:WP_003900344.1;Name=WP_003900344.1;gbkey=CDS;gene=ctpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215985.1;locus_tag=AL60_RS13040;product=cobalt-translocating P-type ATPase CtpD;protein_id=WP_003900344.1;transl_table=11 NZ_KK316849.1 RefSeq gene 25354 25728 . + . ID=gene-AL60_RS13045;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AL60_RS13045;old_locus_tag=AL60_01506 NZ_KK316849.1 Protein Homology CDS 25354 25728 . + 0 ID=cds-WP_003900345.1;Parent=gene-AL60_RS13045;Dbxref=GenBank:WP_003900345.1;Name=WP_003900345.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215986.1;locus_tag=AL60_RS13045;product=thioredoxin family protein;protein_id=WP_003900345.1;transl_table=11 NZ_KK316849.1 RefSeq gene 25744 26115 . + . ID=gene-AL60_RS13050;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AL60_RS13050;old_locus_tag=AL60_01507 NZ_KK316849.1 Protein Homology CDS 25744 26115 . + 0 ID=cds-WP_003407501.1;Parent=gene-AL60_RS13050;Dbxref=GenBank:WP_003407501.1;Name=WP_003407501.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177815.1;locus_tag=AL60_RS13050;product=thioredoxin;protein_id=WP_003407501.1;transl_table=11 NZ_KK316849.1 RefSeq gene 26137 26994 . + . ID=gene-AL60_RS13055;Name=AL60_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13055;old_locus_tag=AL60_01508 NZ_KK316849.1 Protein Homology CDS 26137 26994 . + 0 ID=cds-WP_003898888.1;Parent=gene-AL60_RS13055;Dbxref=GenBank:WP_003898888.1;Name=WP_003898888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215988.1;locus_tag=AL60_RS13055;product=enoyl-CoA hydratase;protein_id=WP_003898888.1;transl_table=11 NZ_KK316849.1 RefSeq gene 27030 28658 . + . ID=gene-AL60_RS13060;Name=AL60_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13060;old_locus_tag=AL60_01509 NZ_KK316849.1 Protein Homology CDS 27030 28658 . + 0 ID=cds-WP_003407507.1;Parent=gene-AL60_RS13060;Dbxref=GenBank:WP_003407507.1;Name=WP_003407507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215989.1;locus_tag=AL60_RS13060;product=macrolide ABC transporter ATP-binding protein;protein_id=WP_003407507.1;transl_table=11 NZ_KK316849.1 RefSeq gene 28755 28946 . + . ID=gene-AL60_RS13065;Name=AL60_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13065;old_locus_tag=AL60_01510 NZ_KK316849.1 Protein Homology CDS 28755 28946 . + 0 ID=cds-WP_003407511.1;Parent=gene-AL60_RS13065;Dbxref=GenBank:WP_003407511.1;Name=WP_003407511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177644.1;locus_tag=AL60_RS13065;product=helix-turn-helix domain-containing protein;protein_id=WP_003407511.1;transl_table=11 NZ_KK316849.1 RefSeq gene 29015 29578 . - . ID=gene-AL60_RS13070;Name=AL60_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13070;old_locus_tag=AL60_01511 NZ_KK316849.1 Protein Homology CDS 29015 29578 . - 0 ID=cds-WP_003407514.1;Parent=gene-AL60_RS13070;Dbxref=GenBank:WP_003407514.1;Name=WP_003407514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215990.1;locus_tag=AL60_RS13070;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003407514.1;transl_table=11 NZ_KK316849.1 RefSeq gene 29589 32420 . - . ID=gene-AL60_RS13075;Name=acn;gbkey=Gene;gene=acn;gene_biotype=protein_coding;locus_tag=AL60_RS13075;old_locus_tag=AL60_01512 NZ_KK316849.1 Protein Homology CDS 29589 32420 . - 0 ID=cds-WP_003898889.1;Parent=gene-AL60_RS13075;Dbxref=GenBank:WP_003898889.1;Name=WP_003898889.1;gbkey=CDS;gene=acn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215991.1;locus_tag=AL60_RS13075;product=iron-regulated aconitate hydratase Acn;protein_id=WP_003898889.1;transl_table=11 NZ_KK316849.1 RefSeq gene 32578 33138 . + . ID=gene-AL60_RS13080;Name=AL60_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13080;old_locus_tag=AL60_01513 NZ_KK316849.1 Protein Homology CDS 32578 33138 . + 0 ID=cds-WP_003407520.1;Parent=gene-AL60_RS13080;Dbxref=GenBank:WP_003407520.1;Name=WP_003407520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215992.1;locus_tag=AL60_RS13080;product=Rv1476 family membrane protein;protein_id=WP_003407520.1;transl_table=11 NZ_KK316849.1 RefSeq gene 33364 34782 . + . ID=gene-AL60_RS13085;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;locus_tag=AL60_RS13085;old_locus_tag=AL60_01514 NZ_KK316849.1 Protein Homology CDS 33364 34782 . + 0 ID=cds-WP_003407523.1;Parent=gene-AL60_RS13085;Dbxref=GenBank:WP_003407523.1;Name=WP_003407523.1;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215993.1;locus_tag=AL60_RS13085;product=NlpC/P60 family peptidoglycan endopeptidase RipA;protein_id=WP_003407523.1;transl_table=11 NZ_KK316849.1 RefSeq gene 34793 35518 . + . ID=gene-AL60_RS13090;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=AL60_RS13090;old_locus_tag=AL60_01515 NZ_KK316849.1 Protein Homology CDS 34793 35518 . + 0 ID=cds-WP_003407525.1;Parent=gene-AL60_RS13090;Dbxref=GenBank:WP_003407525.1;Name=WP_003407525.1;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215994.1;locus_tag=AL60_RS13090;product=NlpC/P60 family peptidoglycan endopeptidase RipB;protein_id=WP_003407525.1;transl_table=11 NZ_KK316849.1 RefSeq gene 35657 36790 . + . ID=gene-AL60_RS13095;Name=moxR1;gbkey=Gene;gene=moxR1;gene_biotype=protein_coding;locus_tag=AL60_RS13095;old_locus_tag=AL60_01516 NZ_KK316849.1 Protein Homology CDS 35657 36790 . + 0 ID=cds-WP_003407527.1;Parent=gene-AL60_RS13095;Dbxref=GenBank:WP_003407527.1;Name=WP_003407527.1;gbkey=CDS;gene=moxR1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177816.1;locus_tag=AL60_RS13095;product=chaperone MoxR1;protein_id=WP_003407527.1;transl_table=11 NZ_KK316849.1 RefSeq gene 36787 37740 . + . ID=gene-AL60_RS13100;Name=AL60_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13100;old_locus_tag=AL60_01517 NZ_KK316849.1 Protein Homology CDS 36787 37740 . + 0 ID=cds-WP_003407529.1;Parent=gene-AL60_RS13100;Dbxref=GenBank:WP_003407529.1;Name=WP_003407529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215996.1;locus_tag=AL60_RS13100;product=DUF58 domain-containing protein;protein_id=WP_003407529.1;transl_table=11 NZ_KK316849.1 RefSeq gene 37751 38758 . + . ID=gene-AL60_RS13105;Name=AL60_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13105;old_locus_tag=AL60_01518 NZ_KK316849.1 Protein Homology CDS 37751 38758 . + 0 ID=cds-WP_003407530.1;Parent=gene-AL60_RS13105;Dbxref=GenBank:WP_003407530.1;Name=WP_003407530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215997.1;locus_tag=AL60_RS13105;product=VWA domain-containing protein;protein_id=WP_003407530.1;transl_table=11 NZ_KK316849.1 RefSeq gene 38831 39673 . - . ID=gene-AL60_RS13110;Name=AL60_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13110;old_locus_tag=AL60_01519 NZ_KK316849.1 Protein Homology CDS 38831 39673 . - 0 ID=cds-WP_003407537.1;Parent=gene-AL60_RS13110;Dbxref=GenBank:WP_003407537.1;Name=WP_003407537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215998.2;locus_tag=AL60_RS13110;product=hypothetical protein;protein_id=WP_003407537.1;transl_table=11 NZ_KK316849.1 RefSeq gene 39814 40557 . + . ID=gene-AL60_RS13115;Name=fabG1;gbkey=Gene;gene=fabG1;gene_biotype=protein_coding;gene_synonym=mabA;locus_tag=AL60_RS13115;old_locus_tag=AL60_01520 NZ_KK316849.1 Protein Homology CDS 39814 40557 . + 0 ID=cds-WP_003898892.1;Parent=gene-AL60_RS13115;Dbxref=GenBank:WP_003898892.1;Name=WP_003898892.1;gbkey=CDS;gene=fabG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215999.1;locus_tag=AL60_RS13115;product=3-oxoacyl-ACP reductase FabG1;protein_id=WP_003898892.1;transl_table=11 NZ_KK316849.1 RefSeq gene 40576 41385 . + . ID=gene-AL60_RS13120;Name=inhA;gbkey=Gene;gene=inhA;gene_biotype=protein_coding;locus_tag=AL60_RS13120;old_locus_tag=AL60_01521 NZ_KK316849.1 Protein Homology CDS 40576 41385 . + 0 ID=cds-WP_003407553.1;Parent=gene-AL60_RS13120;Dbxref=GenBank:WP_003407553.1;Name=WP_003407553.1;Ontology_term=GO:0071768;gbkey=CDS;gene=inhA;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216000.1;locus_tag=AL60_RS13120;product=NADH-dependent enoyl-ACP reductase InhA;protein_id=WP_003407553.1;transl_table=11 NZ_KK316849.1 RefSeq gene 41391 42425 . + . ID=gene-AL60_RS13125;Name=hemZ;gbkey=Gene;gene=hemZ;gene_biotype=protein_coding;locus_tag=AL60_RS13125;old_locus_tag=AL60_01522 NZ_KK316849.1 Protein Homology CDS 41391 42425 . + 0 ID=cds-WP_003407559.1;Parent=gene-AL60_RS13125;Dbxref=GenBank:WP_003407559.1;Name=WP_003407559.1;Ontology_term=GO:0006783,GO:0004325;gbkey=CDS;gene=hemZ;go_function=ferrochelatase activity|0004325||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216001.1;locus_tag=AL60_RS13125;product=ferrochelatase;protein_id=WP_003407559.1;transl_table=11 NZ_KK316849.1 RefSeq gene 42391 43257 . - . ID=gene-AL60_RS13130;Name=AL60_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13130;old_locus_tag=AL60_01523 NZ_KK316849.1 Protein Homology CDS 42391 43257 . - 0 ID=cds-WP_003902086.1;Parent=gene-AL60_RS13130;Dbxref=GenBank:WP_003902086.1;Name=WP_003902086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216002.2;locus_tag=AL60_RS13130;product=hypothetical protein;protein_id=WP_003902086.1;transl_table=11 NZ_KK316849.1 RefSeq gene 43315 43749 . + . ID=gene-AL60_RS13135;Name=AL60_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13135;old_locus_tag=AL60_01524 NZ_KK316849.1 Protein Homology CDS 43315 43749 . + 0 ID=cds-WP_003407562.1;Parent=gene-AL60_RS13135;Dbxref=GenBank:WP_003407562.1;Name=WP_003407562.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216003.1;locus_tag=AL60_RS13135;product=NfeD family protein;protein_id=WP_003407562.1;transl_table=11 NZ_KK316849.1 RefSeq gene 43771 44916 . + . ID=gene-AL60_RS13140;Name=AL60_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13140;old_locus_tag=AL60_01525 NZ_KK316849.1 Protein Homology CDS 43771 44916 . + 0 ID=cds-WP_003407571.1;Parent=gene-AL60_RS13140;Dbxref=GenBank:WP_003407571.1;Name=WP_003407571.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216004.1;locus_tag=AL60_RS13140;product=SPFH domain-containing protein;protein_id=WP_003407571.1;transl_table=11 NZ_KK316849.1 RefSeq gene 44926 45282 . + . ID=gene-AL60_RS13145;Name=AL60_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13145;old_locus_tag=AL60_01526 NZ_KK316849.1 Protein Homology CDS 44926 45282 . + 0 ID=cds-WP_003900347.1;Parent=gene-AL60_RS13145;Dbxref=GenBank:WP_003900347.1;Name=WP_003900347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177645.1;locus_tag=AL60_RS13145;product=DoxX family protein;protein_id=WP_003900347.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 45328 45507 . + . ID=gene-AL60_RS13150;Name=AL60_RS13150;end_range=45507,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS13150;old_locus_tag=AL60_01527;partial=true;pseudo=true;start_range=.,45328 NZ_KK316849.1 Protein Homology CDS 45328 45507 . + 0 ID=cds-AL60_RS13150;Parent=gene-AL60_RS13150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=45507,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903477.1;locus_tag=AL60_RS13150;partial=true;product=hypothetical protein;pseudo=true;start_range=.,45328;transl_table=11 NZ_KK316849.1 RefSeq gene 45696 47003 . + . ID=gene-AL60_RS13155;Name=AL60_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13155;old_locus_tag=AL60_01528 NZ_KK316849.1 Protein Homology CDS 45696 47003 . + 0 ID=cds-WP_003898896.1;Parent=gene-AL60_RS13155;Dbxref=GenBank:WP_003898896.1;Name=WP_003898896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216006.1;locus_tag=AL60_RS13155;product=membrane protein;protein_id=WP_003898896.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 47044 47235 . + . ID=gene-AL60_RS28120;Name=AL60_RS28120;end_range=47235,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28120;partial=true;pseudo=true;start_range=.,47044 NZ_KK316849.1 Protein Homology CDS 47044 47235 . + 0 ID=cds-AL60_RS28120;Parent=gene-AL60_RS28120;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=47235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015289458.1;locus_tag=AL60_RS28120;partial=true;product=transposase;pseudo=true;start_range=.,47044;transl_table=11 NZ_KK316849.1 RefSeq gene 47582 48340 . - . ID=gene-AL60_RS13160;Name=AL60_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13160;old_locus_tag=AL60_01529 NZ_KK316849.1 Protein Homology CDS 47582 48340 . - 0 ID=cds-WP_003407583.1;Parent=gene-AL60_RS13160;Dbxref=GenBank:WP_003407583.1;Name=WP_003407583.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216007.1;locus_tag=AL60_RS13160;product=TVP38/TMEM64 family protein;protein_id=WP_003407583.1;transl_table=11 NZ_KK316849.1 RefSeq gene 48531 50378 . + . ID=gene-AL60_RS13165;Name=mutA;gbkey=Gene;gene=mutA;gene_biotype=protein_coding;locus_tag=AL60_RS13165;old_locus_tag=AL60_01530 NZ_KK316849.1 Protein Homology CDS 48531 50378 . + 0 ID=cds-WP_003407585.1;Parent=gene-AL60_RS13165;Dbxref=GenBank:WP_003407585.1;Name=WP_003407585.1;Ontology_term=GO:0019652,GO:0004494;gbkey=CDS;gene=mutA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA;go_process=lactate fermentation to propionate and acetate|0019652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216008.1;locus_tag=AL60_RS13165;product=methylmalonyl-CoA mutase small subunit;protein_id=WP_003407585.1;transl_table=11 NZ_KK316849.1 RefSeq gene 50379 52631 . + . ID=gene-AL60_RS13170;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=AL60_RS13170;old_locus_tag=AL60_01531 NZ_KK316849.1 Protein Homology CDS 50379 52631 . + 0 ID=cds-WP_003407587.1;Parent=gene-AL60_RS13170;Dbxref=GenBank:WP_003407587.1;Name=WP_003407587.1;Ontology_term=GO:0004494,GO:0031419,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,cobalamin binding|0031419||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216009.1;locus_tag=AL60_RS13170;product=methylmalonyl-CoA mutase;protein_id=WP_003407587.1;transl_table=11 NZ_KK316849.1 RefSeq gene 52645 52947 . + . ID=gene-AL60_RS13175;Name=mazE4;gbkey=Gene;gene=mazE4;gene_biotype=protein_coding;locus_tag=AL60_RS13175;old_locus_tag=AL60_01532 NZ_KK316849.1 Protein Homology CDS 52645 52947 . + 0 ID=cds-WP_003900349.1;Parent=gene-AL60_RS13175;Dbxref=GenBank:WP_003900349.1;Name=WP_003900349.1;gbkey=CDS;gene=mazE4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216010.1;locus_tag=AL60_RS13175;product=type II toxin-antitoxin system antitoxin MazE4;protein_id=WP_003900349.1;transl_table=11 NZ_KK316849.1 RefSeq gene 52944 53261 . + . ID=gene-AL60_RS13180;Name=mazF4;gbkey=Gene;gene=mazF4;gene_biotype=protein_coding;gene_synonym=mazF-mt7;locus_tag=AL60_RS13180;old_locus_tag=AL60_01533 NZ_KK316849.1 Protein Homology CDS 52944 53261 . + 0 ID=cds-WP_003407593.1;Parent=gene-AL60_RS13180;Dbxref=GenBank:WP_003407593.1;Name=WP_003407593.1;gbkey=CDS;gene=mazF4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216011.1;locus_tag=AL60_RS13180;product=type II toxin-antitoxin system toxin endoribonuclease MazF4;protein_id=WP_003407593.1;transl_table=11 NZ_KK316849.1 RefSeq gene 53258 54262 . + . ID=gene-AL60_RS13185;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=AL60_RS13185;old_locus_tag=AL60_01534 NZ_KK316849.1 Protein Homology CDS 53258 54262 . + 0 ID=cds-WP_003407596.1;Parent=gene-AL60_RS13185;Dbxref=GenBank:WP_003407596.1;Name=WP_003407596.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216012.1;locus_tag=AL60_RS13185;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_003407596.1;transl_table=11 NZ_KK316849.1 RefSeq gene 54315 55604 . + . ID=gene-AL60_RS13190;Name=lipL;gbkey=Gene;gene=lipL;gene_biotype=protein_coding;locus_tag=AL60_RS13190;old_locus_tag=AL60_01535 NZ_KK316849.1 Protein Homology CDS 54315 55604 . + 0 ID=cds-WP_003407599.1;Parent=gene-AL60_RS13190;Dbxref=GenBank:WP_003407599.1;Name=WP_003407599.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipL;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216013.1;locus_tag=AL60_RS13190;product=esterase/beta-lactamase LipL;protein_id=WP_003407599.1;transl_table=11 NZ_KK316849.1 RefSeq gene 55677 56453 . - . ID=gene-AL60_RS13195;Name=AL60_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13195;old_locus_tag=AL60_01536 NZ_KK316849.1 Protein Homology CDS 55677 56453 . - 0 ID=cds-WP_305953045.1;Parent=gene-AL60_RS13195;Dbxref=GenBank:WP_305953045.1;Name=WP_305953045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898898.1;locus_tag=AL60_RS13195;product=class I SAM-dependent methyltransferase;protein_id=WP_305953045.1;transl_table=11 NZ_KK316849.1 RefSeq gene 56508 56720 . - . ID=gene-AL60_RS13200;Name=AL60_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13200;old_locus_tag=AL60_01537 NZ_KK316849.1 Protein Homology CDS 56508 56720 . - 0 ID=cds-WP_003898900.1;Parent=gene-AL60_RS13200;Dbxref=GenBank:WP_003898900.1;Name=WP_003898900.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177647.1;locus_tag=AL60_RS13200;product=dodecin;protein_id=WP_003898900.1;transl_table=11 NZ_KK316849.1 RefSeq gene 56730 57032 . - . ID=gene-AL60_RS27910;Name=AL60_RS27910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27910 NZ_KK316849.1 Protein Homology CDS 56730 57032 . - 0 ID=cds-WP_003407610.1;Parent=gene-AL60_RS27910;Dbxref=GenBank:WP_003407610.1;Name=WP_003407610.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012514.6;locus_tag=AL60_RS27910;product=NUDIX domain-containing protein;protein_id=WP_003407610.1;transl_table=11 NZ_KK316849.1 RefSeq gene 57224 58252 . + . ID=gene-AL60_RS13210;Name=losA;gbkey=Gene;gene=losA;gene_biotype=protein_coding;gene_synonym=pimF;locus_tag=AL60_RS13210;old_locus_tag=AL60_01539 NZ_KK316849.1 Protein Homology CDS 57224 58252 . + 0 ID=cds-WP_003407612.1;Parent=gene-AL60_RS13210;Dbxref=GenBank:WP_003407612.1;Name=WP_003407612.1;gbkey=CDS;gene=losA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216016.1;locus_tag=AL60_RS13210;product=glycosyltransferase LosA;protein_id=WP_003407612.1;transl_table=11 NZ_KK316849.1 RefSeq gene 58264 59085 . + . ID=gene-AL60_RS13215;Name=AL60_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13215;old_locus_tag=AL60_01540 NZ_KK316849.1 Protein Homology CDS 58264 59085 . + 0 ID=cds-WP_012054277.1;Parent=gene-AL60_RS13215;Dbxref=GenBank:WP_012054277.1;Name=WP_012054277.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216017.1;locus_tag=AL60_RS13215;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_012054277.1;transl_table=11 NZ_KK316849.1 RefSeq gene 59298 60197 . + . ID=gene-AL60_RS13220;Name=AL60_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13220;old_locus_tag=AL60_01541 NZ_KK316849.1 Protein Homology CDS 59298 60197 . + 0 ID=cds-WP_003407616.1;Parent=gene-AL60_RS13220;Dbxref=GenBank:WP_003407616.1;Name=WP_003407616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216018.1;locus_tag=AL60_RS13220;product=glycoside hydrolase family protein;protein_id=WP_003407616.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 60370 61518 . - . ID=gene-AL60_RS25835;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=pseudogene;gene_synonym=fcnA,wecE;locus_tag=AL60_RS25835;old_locus_tag=AL60_01542;pseudo=true NZ_KK316849.1 Protein Homology CDS 60370 61518 . - 0 ID=cds-AL60_RS25835;Parent=gene-AL60_RS25835;Note=internal stop;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950550.1;locus_tag=AL60_RS25835;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;pseudo=true;transl_table=11 NZ_KK316849.1 RefSeq gene 61655 62320 . - . ID=gene-AL60_RS13225;Name=AL60_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13225;old_locus_tag=AL60_01543 NZ_KK316849.1 Protein Homology CDS 61655 62320 . - 0 ID=cds-WP_003407619.1;Parent=gene-AL60_RS13225;Dbxref=GenBank:WP_003407619.1;Name=WP_003407619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216021.1;locus_tag=AL60_RS13225;product=acetyltransferase;protein_id=WP_003407619.1;transl_table=11 NZ_KK316849.1 RefSeq gene 62317 62835 . - . ID=gene-AL60_RS13230;Name=AL60_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13230;old_locus_tag=AL60_01544 NZ_KK316849.1 Protein Homology CDS 62317 62835 . - 0 ID=cds-WP_003898904.1;Parent=gene-AL60_RS13230;Dbxref=GenBank:WP_003898904.1;Name=WP_003898904.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF019847.6;locus_tag=AL60_RS13230;product=class I SAM-dependent methyltransferase;protein_id=WP_003898904.1;transl_table=11 NZ_KK316849.1 RefSeq gene 63101 63796 . - . ID=gene-AL60_RS13235;Name=AL60_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13235;old_locus_tag=AL60_01545 NZ_KK316849.1 Protein Homology CDS 63101 63796 . - 0 ID=cds-WP_003407623.1;Parent=gene-AL60_RS13235;Dbxref=GenBank:WP_003407623.1;Name=WP_003407623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216023.1;locus_tag=AL60_RS13235;product=WbqC family protein;protein_id=WP_003407623.1;transl_table=11 NZ_KK316849.1 RefSeq gene 63730 64233 . + . ID=gene-AL60_RS13240;Name=AL60_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13240;old_locus_tag=AL60_01546 NZ_KK316849.1 Protein Homology CDS 63730 64233 . + 0 ID=cds-WP_003900353.1;Parent=gene-AL60_RS13240;Dbxref=GenBank:WP_003900353.1;Name=WP_003900353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177648.1;locus_tag=AL60_RS13240;product=hypothetical protein;protein_id=WP_003900353.1;transl_table=11 NZ_KK316849.1 RefSeq gene 64469 66268 . - . ID=gene-AL60_RS13245;Name=AL60_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13245;old_locus_tag=AL60_01547 NZ_KK316849.1 Protein Homology CDS 64469 66268 . - 0 ID=cds-WP_003898905.1;Parent=gene-AL60_RS13245;Dbxref=GenBank:WP_003898905.1;Name=WP_003898905.1;Ontology_term=GO:0016758;gbkey=CDS;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216024.1;locus_tag=AL60_RS13245;product=glycosyltransferase 87 family protein;protein_id=WP_003898905.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 66333 66452 . + . ID=gene-AL60_RS27530;Name=AL60_RS27530;end_range=66452,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27530;partial=true;pseudo=true;start_range=.,66333 NZ_KK316849.1 Protein Homology CDS 66333 66452 . + 0 ID=cds-AL60_RS27530;Parent=gene-AL60_RS27530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=66452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216027.1;locus_tag=AL60_RS27530;partial=true;product=GDP-mannose 4%2C6-dehydratase;pseudo=true;start_range=.,66333;transl_table=11 NZ_KK316849.1 RefSeq gene 66586 67467 . + . ID=gene-AL60_RS13255;Name=AL60_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13255;old_locus_tag=AL60_01549 NZ_KK316849.1 Protein Homology CDS 66586 67467 . + 0 ID=cds-WP_003407632.1;Parent=gene-AL60_RS13255;Dbxref=GenBank:WP_003407632.1;Name=WP_003407632.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216025.1;locus_tag=AL60_RS13255;product=class I SAM-dependent methyltransferase;protein_id=WP_003407632.1;transl_table=11 NZ_KK316849.1 RefSeq gene 67669 68967 . + . ID=gene-AL60_RS13260;Name=AL60_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13260;old_locus_tag=AL60_01550 NZ_KK316849.1 Protein Homology CDS 67669 68967 . + 0 ID=cds-WP_003901183.1;Parent=gene-AL60_RS13260;Dbxref=GenBank:WP_003901183.1;Name=WP_003901183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216026.1;locus_tag=AL60_RS13260;product=hypothetical protein;protein_id=WP_003901183.1;transl_table=11 NZ_KK316849.1 RefSeq gene 69448 70470 . + . ID=gene-AL60_RS13265;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AL60_RS13265;old_locus_tag=AL60_01551 NZ_KK316849.1 Protein Homology CDS 69448 70470 . + 0 ID=cds-WP_003407639.1;Parent=gene-AL60_RS13265;Dbxref=GenBank:WP_003407639.1;Name=WP_003407639.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216027.1;locus_tag=AL60_RS13265;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_003407639.1;transl_table=11 NZ_KK316849.1 RefSeq gene 70467 71435 . + . ID=gene-AL60_RS13270;Name=epiA;gbkey=Gene;gene=epiA;gene_biotype=protein_coding;locus_tag=AL60_RS13270;old_locus_tag=AL60_01552 NZ_KK316849.1 Protein Homology CDS 70467 71435 . + 0 ID=cds-WP_003407642.1;Parent=gene-AL60_RS13270;Dbxref=GenBank:WP_003407642.1;Name=WP_003407642.1;Ontology_term=GO:0016491;gbkey=CDS;gene=epiA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216028.1;locus_tag=AL60_RS13270;product=GDP-L-fucose synthase family protein;protein_id=WP_003407642.1;transl_table=11 NZ_KK316849.1 RefSeq gene 71432 72163 . + . ID=gene-AL60_RS13275;Name=AL60_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13275;old_locus_tag=AL60_01553 NZ_KK316849.1 Protein Homology CDS 71432 72163 . + 0 ID=cds-WP_003407647.1;Parent=gene-AL60_RS13275;Dbxref=GenBank:WP_003407647.1;Name=WP_003407647.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216029.1;locus_tag=AL60_RS13275;product=FkbM family methyltransferase;protein_id=WP_003407647.1;transl_table=11 NZ_KK316849.1 RefSeq gene 72181 72969 . - . ID=gene-AL60_RS13280;Name=AL60_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13280;old_locus_tag=AL60_01554 NZ_KK316849.1 Protein Homology CDS 72181 72969 . - 0 ID=cds-WP_003407650.1;Parent=gene-AL60_RS13280;Dbxref=GenBank:WP_003407650.1;Name=WP_003407650.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216030.1;locus_tag=AL60_RS13280;product=glycosyltransferase family 2 protein;protein_id=WP_003407650.1;transl_table=11 NZ_KK316849.1 RefSeq gene 73004 73900 . - . ID=gene-AL60_RS13285;Name=AL60_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13285;old_locus_tag=AL60_01555 NZ_KK316849.1 Protein Homology CDS 73004 73900 . - 0 ID=cds-WP_003900356.1;Parent=gene-AL60_RS13285;Dbxref=GenBank:WP_003900356.1;Name=WP_003900356.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216031.1;locus_tag=AL60_RS13285;product=class I SAM-dependent methyltransferase;protein_id=WP_003900356.1;transl_table=11 NZ_KK316849.1 RefSeq gene 73903 74913 . - . ID=gene-AL60_RS13290;Name=AL60_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13290;old_locus_tag=AL60_01556 NZ_KK316849.1 Protein Homology CDS 73903 74913 . - 0 ID=cds-WP_003900357.1;Parent=gene-AL60_RS13290;Dbxref=GenBank:WP_003900357.1;Name=WP_003900357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216032.2;locus_tag=AL60_RS13290;product=glycosyltransferase;protein_id=WP_003900357.1;transl_table=11 NZ_KK316849.1 RefSeq gene 75245 76009 . + . ID=gene-AL60_RS13295;Name=AL60_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13295;old_locus_tag=AL60_01557 NZ_KK316849.1 Protein Homology CDS 75245 76009 . + 0 ID=cds-WP_003906617.1;Parent=gene-AL60_RS13295;Dbxref=GenBank:WP_003906617.1;Name=WP_003906617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216033.1;locus_tag=AL60_RS13295;product=GAP family protein;protein_id=WP_003906617.1;transl_table=11 NZ_KK316849.1 RefSeq gene 76018 76977 . + . ID=gene-AL60_RS13300;Name=AL60_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13300;old_locus_tag=AL60_01558 NZ_KK316849.1 Protein Homology CDS 76018 76977 . + 0 ID=cds-WP_012054278.1;Parent=gene-AL60_RS13300;Dbxref=GenBank:WP_012054278.1;Name=WP_012054278.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216034.1;locus_tag=AL60_RS13300;product=glycosyltransferase family 2 protein;protein_id=WP_012054278.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 77224 77376 . + . ID=gene-AL60_RS27105;Name=AL60_RS27105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27105;partial=true;pseudo=true;start_range=.,77224 NZ_KK316849.1 Protein Homology CDS 77224 77376 . + 0 ID=cds-AL60_RS27105;Parent=gene-AL60_RS27105;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217919.1;locus_tag=AL60_RS27105;partial=true;product=DegT/DnrJ/EryC1/StrS family aminotransferase;pseudo=true;start_range=.,77224;transl_table=11 NZ_KK316849.1 RefSeq gene 77402 78442 . + . ID=gene-AL60_RS13310;Name=AL60_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13310;old_locus_tag=AL60_01560 NZ_KK316849.1 Protein Homology CDS 77402 78442 . + 0 ID=cds-WP_003407657.1;Parent=gene-AL60_RS13310;Dbxref=GenBank:WP_003407657.1;Name=WP_003407657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216036.3;locus_tag=AL60_RS13310;product=glycosyltransferase;protein_id=WP_003407657.1;transl_table=11 NZ_KK316849.1 RefSeq gene 78676 80427 . + . ID=gene-AL60_RS13315;Name=fadD25;gbkey=Gene;gene=fadD25;gene_biotype=protein_coding;gene_synonym=faaL25;locus_tag=AL60_RS13315;old_locus_tag=AL60_01561 NZ_KK316849.1 Protein Homology CDS 78676 80427 . + 0 ID=cds-WP_003901187.1;Parent=gene-AL60_RS13315;Dbxref=GenBank:WP_003901187.1;Name=WP_003901187.1;gbkey=CDS;gene=fadD25;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216037.1;locus_tag=AL60_RS13315;product=fatty-acid--AMP ligase FAAL25/FadD25;protein_id=WP_003901187.1;transl_table=11 NZ_KK316849.1 RefSeq gene 80546 83986 . - . ID=gene-AL60_RS13320;Name=mmpL12;gbkey=Gene;gene=mmpL12;gene_biotype=protein_coding;locus_tag=AL60_RS13320;old_locus_tag=AL60_01562 NZ_KK316849.1 Protein Homology CDS 80546 83986 . - 0 ID=cds-WP_003898915.1;Parent=gene-AL60_RS13320;Dbxref=GenBank:WP_003898915.1;Name=WP_003898915.1;gbkey=CDS;gene=mmpL12;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216038.1;locus_tag=AL60_RS13320;product=RND transporter MmpL12;protein_id=WP_003898915.1;transl_table=11 NZ_KK316849.1 RefSeq gene 84027 85070 . + . ID=gene-AL60_RS13325;Name=AL60_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13325;old_locus_tag=AL60_01563 NZ_KK316849.1 Protein Homology CDS 84027 85070 . + 0 ID=cds-WP_003407670.1;Parent=gene-AL60_RS13325;Dbxref=GenBank:WP_003407670.1;Name=WP_003407670.1;Ontology_term=GO:0071770,GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=DIM/DIP cell wall layer assembly|0071770||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216039.1;locus_tag=AL60_RS13325;product=phthiotriol/phenolphthiotriol dimycocerosates methyltransferase;protein_id=WP_003407670.1;transl_table=11 NZ_KK316849.1 RefSeq gene 85100 86344 . + . ID=gene-AL60_RS13330;Name=AL60_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13330;old_locus_tag=AL60_01564 NZ_KK316849.1 Protein Homology CDS 85100 86344 . + 0 ID=cds-WP_003407671.1;Parent=gene-AL60_RS13330;Dbxref=GenBank:WP_003407671.1;Name=WP_003407671.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216040.1;locus_tag=AL60_RS13330;product=glycosyltransferase;protein_id=WP_003407671.1;transl_table=11 NZ_KK316849.1 RefSeq gene 86391 87176 . + . ID=gene-AL60_RS13335;Name=AL60_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13335;old_locus_tag=AL60_01565 NZ_KK316849.1 Protein Homology CDS 86391 87176 . + 0 ID=cds-WP_003407672.1;Parent=gene-AL60_RS13335;Dbxref=GenBank:WP_003407672.1;Name=WP_003407672.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216041.1;locus_tag=AL60_RS13335;product=glycosyltransferase family 2 protein;protein_id=WP_003407672.1;transl_table=11 NZ_KK316849.1 RefSeq gene 87154 88434 . - . ID=gene-AL60_RS13340;Name=AL60_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13340;old_locus_tag=AL60_01566 NZ_KK316849.1 Protein Homology CDS 87154 88434 . - 0 ID=cds-WP_003407676.1;Parent=gene-AL60_RS13340;Dbxref=GenBank:WP_003407676.1;Name=WP_003407676.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216042.1;locus_tag=AL60_RS13340;product=glycosyltransferase;protein_id=WP_003407676.1;transl_table=11 NZ_KK316849.1 RefSeq gene 88457 94783 . - . ID=gene-AL60_RS13345;Name=pks2;gbkey=Gene;gene=pks2;gene_biotype=protein_coding;locus_tag=AL60_RS13345;old_locus_tag=AL60_01567 NZ_KK316849.1 Protein Homology CDS 88457 94783 . - 0 ID=cds-WP_003913253.1;Parent=gene-AL60_RS13345;Dbxref=GenBank:WP_003913253.1;Name=WP_003913253.1;gbkey=CDS;gene=pks2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216043.1;locus_tag=AL60_RS13345;product=sulfolipid-1 biosynthesis phthioceranic/hydroxyphthioceranic acid synthase;protein_id=WP_003913253.1;transl_table=11 NZ_KK316849.1 RefSeq gene 95327 95824 . - . ID=gene-AL60_RS13350;Name=AL60_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13350;old_locus_tag=AL60_01568 NZ_KK316849.1 Protein Homology CDS 95327 95824 . - 0 ID=cds-WP_003898919.1;Parent=gene-AL60_RS13350;Dbxref=GenBank:WP_003898919.1;Name=WP_003898919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216044.1;locus_tag=AL60_RS13350;product=polyketide synthase;protein_id=WP_003898919.1;transl_table=11 NZ_KK316849.1 RefSeq gene 95876 97630 . + . ID=gene-AL60_RS13355;Name=fadD24;gbkey=Gene;gene=fadD24;gene_biotype=protein_coding;gene_synonym=faaL24;locus_tag=AL60_RS13355;old_locus_tag=AL60_01569 NZ_KK316849.1 Protein Homology CDS 95876 97630 . + 0 ID=cds-WP_003898920.1;Parent=gene-AL60_RS13355;Dbxref=GenBank:WP_003898920.1;Name=WP_003898920.1;gbkey=CDS;gene=fadD24;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216045.1;locus_tag=AL60_RS13355;product=fatty-acid--AMP ligase FAAL24/FadD24;protein_id=WP_003898920.1;transl_table=11 NZ_KK316849.1 RefSeq gene 97747 98850 . + . ID=gene-AL60_RS13360;Name=adh;gbkey=Gene;gene=adh;gene_biotype=protein_coding;locus_tag=AL60_RS13360;old_locus_tag=AL60_01570 NZ_KK316849.1 Protein Homology CDS 97747 98850 . + 0 ID=cds-WP_003407690.1;Parent=gene-AL60_RS13360;Dbxref=GenBank:WP_003407690.1;Name=WP_003407690.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=adh;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216046.1;locus_tag=AL60_RS13360;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_003407690.1;transl_table=11 NZ_KK316849.1 RefSeq gene 98847 99413 . + . ID=gene-AL60_RS13365;Name=AL60_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13365;old_locus_tag=AL60_01571 NZ_KK316849.1 Protein Homology CDS 98847 99413 . + 0 ID=cds-WP_003407692.1;Parent=gene-AL60_RS13365;Dbxref=GenBank:WP_003407692.1;Name=WP_003407692.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216047.1;locus_tag=AL60_RS13365;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003407692.1;transl_table=11 NZ_KK316849.1 RefSeq gene 99490 99924 . - . ID=gene-AL60_RS13370;Name=AL60_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13370;old_locus_tag=AL60_01572 NZ_KK316849.1 Protein Homology CDS 99490 99924 . - 0 ID=cds-WP_003407695.1;Parent=gene-AL60_RS13370;Dbxref=GenBank:WP_003407695.1;Name=WP_003407695.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216048.1;locus_tag=AL60_RS13370;product=PaaI family thioesterase;protein_id=WP_003407695.1;transl_table=11 NZ_KK316849.1 RefSeq gene 99984 101111 . + . ID=gene-AL60_RS13375;Name=AL60_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13375;old_locus_tag=AL60_01573 NZ_KK316849.1 Protein Homology CDS 99984 101111 . + 0 ID=cds-WP_003898921.1;Parent=gene-AL60_RS13375;Dbxref=GenBank:WP_003898921.1;Name=WP_003898921.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216049.1;locus_tag=AL60_RS13375;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_003898921.1;transl_table=11 NZ_KK316849.1 RefSeq gene 101108 101785 . + . ID=gene-AL60_RS13380;Name=AL60_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13380;old_locus_tag=AL60_01574 NZ_KK316849.1 Protein Homology CDS 101108 101785 . + 0 ID=cds-WP_003407700.1;Parent=gene-AL60_RS13380;Dbxref=GenBank:WP_003407700.1;Name=WP_003407700.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216050.1;locus_tag=AL60_RS13380;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003407700.1;transl_table=11 NZ_KK316849.1 cmsearch riboswitch 101883 102052 . + . ID=id-NZ_KK316849.1:101883..102052;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316849.1 RefSeq gene 102350 102586 . + . ID=gene-AL60_RS13385;Name=AL60_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13385;old_locus_tag=AL60_01575 NZ_KK316849.1 Protein Homology CDS 102350 102586 . + 0 ID=cds-WP_003407710.1;Parent=gene-AL60_RS13385;Dbxref=GenBank:WP_003407710.1;Name=WP_003407710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216051.1;locus_tag=AL60_RS13385;product=Rv1535 family protein;protein_id=WP_003407710.1;transl_table=11 NZ_KK316849.1 RefSeq gene 102893 106018 . + . ID=gene-AL60_RS13390;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AL60_RS13390;old_locus_tag=AL60_01576 NZ_KK316849.1 Protein Homology CDS 102893 106018 . + 0 ID=cds-WP_003407714.1;Parent=gene-AL60_RS13390;Dbxref=GenBank:WP_003407714.1;Name=WP_003407714.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216052.1;locus_tag=AL60_RS13390;product=isoleucine--tRNA ligase;protein_id=WP_003407714.1;transl_table=11 NZ_KK316849.1 RefSeq gene 106230 107621 . + . ID=gene-AL60_RS13395;Name=dinX;gbkey=Gene;gene=dinX;gene_biotype=protein_coding;locus_tag=AL60_RS13395;old_locus_tag=AL60_01577 NZ_KK316849.1 Protein Homology CDS 106230 107621 . + 0 ID=cds-WP_012054279.1;Parent=gene-AL60_RS13395;Dbxref=GenBank:WP_012054279.1;Name=WP_012054279.1;Ontology_term=GO:0006260,GO:0003887;gbkey=CDS;gene=dinX;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216053.3;locus_tag=AL60_RS13395;product=DNA polymerase IV;protein_id=WP_012054279.1;transl_table=11 NZ_KK316849.1 RefSeq gene 107586 108566 . - . ID=gene-AL60_RS13400;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AL60_RS13400;old_locus_tag=AL60_01578 NZ_KK316849.1 Protein Homology CDS 107586 108566 . - 0 ID=cds-WP_003407720.1;Parent=gene-AL60_RS13400;Dbxref=GenBank:WP_003407720.1;Name=WP_003407720.1;gbkey=CDS;gene=ansA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216054.1;locus_tag=AL60_RS13400;product=asparaginase;protein_id=WP_003407720.1;transl_table=11 NZ_KK316849.1 RefSeq gene 108618 109226 . + . ID=gene-AL60_RS13405;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AL60_RS13405;old_locus_tag=AL60_01579 NZ_KK316849.1 Protein Homology CDS 108618 109226 . + 0 ID=cds-WP_003407722.1;Parent=gene-AL60_RS13405;Dbxref=GenBank:WP_003407722.1;Name=WP_003407722.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216055.1;locus_tag=AL60_RS13405;product=signal peptidase II;protein_id=WP_003407722.1;transl_table=11 NZ_KK316849.1 RefSeq gene 109219 110145 . + . ID=gene-AL60_RS13410;Name=AL60_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13410;old_locus_tag=AL60_01580 NZ_KK316849.1 Protein Homology CDS 109219 110145 . + 0 ID=cds-WP_003407723.1;Parent=gene-AL60_RS13410;Dbxref=GenBank:WP_003407723.1;Name=WP_003407723.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216056.1;locus_tag=AL60_RS13410;product=RluA family pseudouridine synthase;protein_id=WP_003407723.1;transl_table=11 NZ_KK316849.1 RefSeq gene 110152 110745 . - . ID=gene-AL60_RS13415;Name=lprI;gbkey=Gene;gene=lprI;gene_biotype=protein_coding;locus_tag=AL60_RS13415;old_locus_tag=AL60_01581 NZ_KK316849.1 Protein Homology CDS 110152 110745 . - 0 ID=cds-WP_003407725.1;Parent=gene-AL60_RS13415;Dbxref=GenBank:WP_003407725.1;Name=WP_003407725.1;gbkey=CDS;gene=lprI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216057.1;locus_tag=AL60_RS13415;product=lysozyme inhibitor LprI family protein;protein_id=WP_003407725.1;transl_table=11 NZ_KK316849.1 RefSeq gene 110800 111210 . - . ID=gene-AL60_RS13420;Name=glbN;gbkey=Gene;gene=glbN;gene_biotype=protein_coding;locus_tag=AL60_RS13420;old_locus_tag=AL60_01582 NZ_KK316849.1 Protein Homology CDS 110800 111210 . - 0 ID=cds-WP_003407730.1;Parent=gene-AL60_RS13420;Dbxref=GenBank:WP_003407730.1;Name=WP_003407730.1;gbkey=CDS;gene=glbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216058.1;locus_tag=AL60_RS13420;product=group 1 truncated hemoglobin GlbN;protein_id=WP_003407730.1;transl_table=11 NZ_KK316849.1 RefSeq gene 111438 112463 . + . ID=gene-AL60_RS13425;Name=AL60_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13425;old_locus_tag=AL60_01583 NZ_KK316849.1 Protein Homology CDS 111438 112463 . + 0 ID=cds-WP_003407734.1;Parent=gene-AL60_RS13425;Dbxref=GenBank:WP_003407734.1;Name=WP_003407734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216059.1;locus_tag=AL60_RS13425;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003407734.1;transl_table=11 NZ_KK316849.1 RefSeq gene 112468 113271 . + . ID=gene-AL60_RS13430;Name=AL60_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13430;old_locus_tag=AL60_01584 NZ_KK316849.1 Protein Homology CDS 112468 113271 . + 0 ID=cds-WP_003407737.1;Parent=gene-AL60_RS13430;Dbxref=GenBank:WP_003407737.1;Name=WP_003407737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216060.1;locus_tag=AL60_RS13430;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003407737.1;transl_table=11 NZ_KK316849.1 RefSeq gene 113293 113520 . + . ID=gene-AL60_RS13435;Name=AL60_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13435;old_locus_tag=AL60_01585 NZ_KK316849.1 Protein Homology CDS 113293 113520 . + 0 ID=cds-WP_003901194.1;Parent=gene-AL60_RS13435;Dbxref=GenBank:WP_003901194.1;Name=WP_003901194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216061.1;locus_tag=AL60_RS13435;product=hypothetical protein;protein_id=WP_003901194.1;transl_table=11 NZ_KK316849.1 RefSeq gene 113569 114000 . + . ID=gene-AL60_RS13440;Name=AL60_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13440;old_locus_tag=AL60_01586 NZ_KK316849.1 Protein Homology CDS 113569 114000 . + 0 ID=cds-WP_003407748.1;Parent=gene-AL60_RS13440;Dbxref=GenBank:WP_003407748.1;Name=WP_003407748.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216062.1;locus_tag=AL60_RS13440;product=type II toxin-antitoxin system Rv0910 family toxin;protein_id=WP_003407748.1;transl_table=11 NZ_KK316849.1 RefSeq gene 114068 117622 . + . ID=gene-AL60_RS13445;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AL60_RS13445;old_locus_tag=AL60_01587 NZ_KK316849.1 Protein Homology CDS 114068 117622 . + 0 ID=cds-WP_003407751.1;Parent=gene-AL60_RS13445;Dbxref=GenBank:WP_003407751.1;Name=WP_003407751.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216063.1;locus_tag=AL60_RS13445;product=DNA polymerase III subunit alpha;protein_id=WP_003407751.1;transl_table=11 NZ_KK316849.1 RefSeq gene 117671 119707 . - . ID=gene-AL60_RS13450;Name=AL60_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13450;old_locus_tag=AL60_01588 NZ_KK316849.1 Protein Homology CDS 117671 119707 . - 0 ID=cds-WP_003903497.1;Parent=gene-AL60_RS13450;Dbxref=GenBank:WP_003903497.1;Name=WP_003903497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177817.1;locus_tag=AL60_RS13450;product=PPE family protein;protein_id=WP_003903497.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 119981 121806 . + . ID=gene-AL60_RS13455;Name=fadD11;gbkey=Gene;gene=fadD11;gene_biotype=pseudogene;locus_tag=AL60_RS13455;old_locus_tag=AL60_01590;pseudo=true NZ_KK316849.1 Protein Homology CDS 119981 121806 . + 0 ID=cds-AL60_RS13455;Parent=gene-AL60_RS13455;Note=frameshifted;gbkey=CDS;gene=fadD11;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014380383.1;locus_tag=AL60_RS13455;product=fatty acid--CoA ligase FadD11;pseudo=true;transl_table=11 NZ_KK316849.1 RefSeq gene 121820 123685 . + . ID=gene-AL60_RS13460;Name=AL60_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13460;old_locus_tag=AL60_01591 NZ_KK316849.1 Protein Homology CDS 121820 123685 . + 0 ID=cds-WP_003407762.1;Parent=gene-AL60_RS13460;Dbxref=GenBank:WP_003407762.1;Name=WP_003407762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216067.1;locus_tag=AL60_RS13460;product=lysophospholipid acyltransferase;protein_id=WP_003407762.1;transl_table=11 NZ_KK316849.1 RefSeq gene 123813 124046 . + . ID=gene-AL60_RS0104575;Name=AL60_RS0104575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104575 NZ_KK316849.1 Protein Homology CDS 123813 124046 . + 0 ID=cds-WP_003407763.1;Parent=gene-AL60_RS0104575;Dbxref=GenBank:WP_003407763.1;Name=WP_003407763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003407763.1;locus_tag=AL60_RS0104575;product=hypothetical protein;protein_id=WP_003407763.1;transl_table=11 NZ_KK316849.1 RefSeq gene 124056 125807 . + . ID=gene-AL60_RS13465;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=AL60_RS13465;old_locus_tag=AL60_01592 NZ_KK316849.1 Protein Homology CDS 124056 125807 . + 0 ID=cds-WP_003898925.1;Parent=gene-AL60_RS13465;Dbxref=GenBank:WP_003898925.1;Name=WP_003898925.1;Ontology_term=GO:0009061,GO:0000104;gbkey=CDS;gene=frdA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216068.1;locus_tag=AL60_RS13465;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_003898925.1;transl_table=11 NZ_KK316849.1 RefSeq gene 125810 126553 . + . ID=gene-AL60_RS13470;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=AL60_RS13470;old_locus_tag=AL60_01593 NZ_KK316849.1 Protein Homology CDS 125810 126553 . + 0 ID=cds-WP_003407767.1;Parent=gene-AL60_RS13470;Dbxref=GenBank:WP_003407767.1;Name=WP_003407767.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216069.1;locus_tag=AL60_RS13470;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_003407767.1;transl_table=11 NZ_KK316849.1 RefSeq gene 126550 126930 . + . ID=gene-AL60_RS13475;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=AL60_RS13475;old_locus_tag=AL60_01594 NZ_KK316849.1 Protein Homology CDS 126550 126930 . + 0 ID=cds-WP_003407768.1;Parent=gene-AL60_RS13475;Dbxref=GenBank:WP_003407768.1;Name=WP_003407768.1;gbkey=CDS;gene=frdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216070.1;locus_tag=AL60_RS13475;product=fumarate reductase subunit C;protein_id=WP_003407768.1;transl_table=11 NZ_KK316849.1 RefSeq gene 126927 127304 . + . ID=gene-AL60_RS13480;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=AL60_RS13480;old_locus_tag=AL60_01595 NZ_KK316849.1 Protein Homology CDS 126927 127304 . + 0 ID=cds-WP_003407771.1;Parent=gene-AL60_RS13480;Dbxref=GenBank:WP_003407771.1;Name=WP_003407771.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216071.1;locus_tag=AL60_RS13480;product=fumarate reductase subunit FrdD;protein_id=WP_003407771.1;transl_table=11 NZ_KK316849.1 RefSeq gene 127372 127980 . + . ID=gene-AL60_RS13485;Name=AL60_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13485;old_locus_tag=AL60_01596 NZ_KK316849.1 Protein Homology CDS 127372 127980 . + 0 ID=cds-WP_003407773.1;Parent=gene-AL60_RS13485;Dbxref=GenBank:WP_003407773.1;Name=WP_003407773.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216072.1;locus_tag=AL60_RS13485;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003407773.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 128167 129312 . + . ID=gene-AL60_RS13490;Name=AL60_RS13490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS13490;old_locus_tag=AL60_01597;partial=true;pseudo=true;start_range=.,128167 NZ_KK316849.1 Protein Homology CDS 128167 129312 . + 0 ID=cds-AL60_RS13490;Parent=gene-AL60_RS13490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293038.1;locus_tag=AL60_RS13490;partial=true;product=MMPL family transporter;pseudo=true;start_range=.,128167;transl_table=11 NZ_KK316849.1 RefSeq gene 129322 129768 . + . ID=gene-AL60_RS13495;Name=AL60_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13495;old_locus_tag=AL60_01598 NZ_KK316849.1 Protein Homology CDS 129322 129768 . + 0 ID=cds-WP_003407780.1;Parent=gene-AL60_RS13495;Dbxref=GenBank:WP_003407780.1;Name=WP_003407780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216074.1;locus_tag=AL60_RS13495;product=F420H(2)-dependent quinone reductase;protein_id=WP_003407780.1;transl_table=11 NZ_KK316849.1 RefSeq gene 129803 131092 . + . ID=gene-AL60_RS13500;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=AL60_RS13500;old_locus_tag=AL60_01599 NZ_KK316849.1 Protein Homology CDS 129803 131092 . + 0 ID=cds-WP_003407781.1;Parent=gene-AL60_RS13500;Dbxref=GenBank:WP_003407781.1;Name=WP_003407781.1;Ontology_term=GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216075.1;locus_tag=AL60_RS13500;product=threonine ammonia-lyase;protein_id=WP_003407781.1;transl_table=11 NZ_KK316849.1 RefSeq gene 131145 131348 . + . ID=gene-AL60_RS13505;Name=AL60_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13505;old_locus_tag=AL60_01600 NZ_KK316849.1 Protein Homology CDS 131145 131348 . + 0 ID=cds-WP_009935474.1;Parent=gene-AL60_RS13505;Dbxref=GenBank:WP_009935474.1;Name=WP_009935474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935474.1;locus_tag=AL60_RS13505;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_009935474.1;transl_table=11 NZ_KK316849.1 RefSeq gene 131354 131758 . + . ID=gene-AL60_RS13510;Name=vapc11;gbkey=Gene;gene=vapc11;gene_biotype=protein_coding;locus_tag=AL60_RS13510;old_locus_tag=AL60_01601 NZ_KK316849.1 Protein Homology CDS 131354 131758 . + 0 ID=cds-WP_003407786.1;Parent=gene-AL60_RS13510;Dbxref=GenBank:WP_003407786.1;Name=WP_003407786.1;gbkey=CDS;gene=vapc11;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216077.1;locus_tag=AL60_RS13510;product=type II toxin-antitoxin system toxin ribonuclease VapC11;protein_id=WP_003407786.1;transl_table=11 NZ_KK316849.1 RefSeq gene 131775 133517 . - . ID=gene-AL60_RS13515;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=AL60_RS13515;old_locus_tag=AL60_01602 NZ_KK316849.1 Protein Homology CDS 131775 133517 . - 0 ID=cds-WP_003407788.1;Parent=gene-AL60_RS13515;Dbxref=GenBank:WP_003407788.1;Name=WP_003407788.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177819.1;locus_tag=AL60_RS13515;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_003407788.1;transl_table=11 NZ_KK316849.1 RefSeq gene 133510 135807 . - . ID=gene-AL60_RS13520;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=AL60_RS13520;old_locus_tag=AL60_01603 NZ_KK316849.1 Protein Homology CDS 133510 135807 . - 0 ID=cds-WP_003407790.1;Parent=gene-AL60_RS13520;Dbxref=GenBank:WP_003407790.1;Name=WP_003407790.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177820.1;locus_tag=AL60_RS13520;product=malto-oligosyltrehalose synthase;protein_id=WP_003407790.1;transl_table=11 NZ_KK316849.1 RefSeq gene 135811 137976 . - . ID=gene-AL60_RS13525;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=AL60_RS13525;old_locus_tag=AL60_01604 NZ_KK316849.1 Protein Homology CDS 135811 137976 . - 0 ID=cds-WP_003898930.1;Parent=gene-AL60_RS13525;Dbxref=GenBank:WP_003898930.1;Name=WP_003898930.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177821.1;locus_tag=AL60_RS13525;product=glycogen debranching protein GlgX;protein_id=WP_003898930.1;transl_table=11 NZ_KK316849.1 RefSeq gene 138015 140204 . - . ID=gene-AL60_RS13530;Name=AL60_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13530;old_locus_tag=AL60_01605 NZ_KK316849.1 Protein Homology CDS 138015 140204 . - 0 ID=cds-WP_003407794.1;Parent=gene-AL60_RS13530;Dbxref=GenBank:WP_003407794.1;Name=WP_003407794.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216081.1;locus_tag=AL60_RS13530;product=acyltransferase family protein;protein_id=WP_003407794.1;transl_table=11 NZ_KK316849.1 RefSeq gene 140303 140995 . - . ID=gene-AL60_RS13535;Name=ripD;gbkey=Gene;gene=ripD;gene_biotype=protein_coding;locus_tag=AL60_RS13535;old_locus_tag=AL60_01606 NZ_KK316849.1 Protein Homology CDS 140303 140995 . - 0 ID=cds-WP_003407798.1;Parent=gene-AL60_RS13535;Dbxref=GenBank:WP_003407798.1;Name=WP_003407798.1;gbkey=CDS;gene=ripD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216082.1;locus_tag=AL60_RS13535;product=NlpC/P60 family peptidoglycan-binding protein RipD;protein_id=WP_003407798.1;transl_table=11 NZ_KK316849.1 RefSeq gene 141235 141684 . - . ID=gene-AL60_RS27110;Name=AL60_RS27110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27110 NZ_KK316849.1 Protein Homology CDS 141235 141684 . - 0 ID=cds-WP_003911567.1;Parent=gene-AL60_RS27110;Dbxref=GenBank:WP_003911567.1;Name=WP_003911567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020424437.1;locus_tag=AL60_RS27110;product=hypothetical protein;protein_id=WP_003911567.1;transl_table=11 NZ_KK316849.1 RefSeq gene 141767 143080 . + . ID=gene-AL60_RS13540;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AL60_RS13540;old_locus_tag=AL60_01608 NZ_KK316849.1 Protein Homology CDS 141767 143080 . + 0 ID=cds-WP_003407803.1;Parent=gene-AL60_RS13540;Dbxref=GenBank:WP_003407803.1;Name=WP_003407803.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216084.1;locus_tag=AL60_RS13540;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_003407803.1;transl_table=11 NZ_KK316849.1 RefSeq gene 143077 144237 . + . ID=gene-AL60_RS13545;Name=AL60_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13545;old_locus_tag=AL60_01609 NZ_KK316849.1 Protein Homology CDS 143077 144237 . + 0 ID=cds-WP_003407805.1;Parent=gene-AL60_RS13545;Dbxref=GenBank:WP_003407805.1;Name=WP_003407805.1;Ontology_term=GO:0009102,GO:0008710,GO:0030170,GO:0042803;gbkey=CDS;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA,pyridoxal phosphate binding|0030170||IEA,protein homodimerization activity|0042803||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177822.1;locus_tag=AL60_RS13545;product=8-amino-7-oxononanoate synthase;protein_id=WP_003407805.1;transl_table=11 NZ_KK316849.1 RefSeq gene 144234 144914 . + . ID=gene-AL60_RS13550;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AL60_RS13550;old_locus_tag=AL60_01610 NZ_KK316849.1 Protein Homology CDS 144234 144914 . + 0 ID=cds-WP_003407806.1;Parent=gene-AL60_RS13550;Dbxref=GenBank:WP_003407806.1;Name=WP_003407806.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216086.1;locus_tag=AL60_RS13550;product=dethiobiotin synthase;protein_id=WP_003407806.1;transl_table=11 NZ_KK316849.1 RefSeq gene 144914 145423 . + . ID=gene-AL60_RS13555;Name=AL60_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13555;old_locus_tag=AL60_01611 NZ_KK316849.1 Protein Homology CDS 144914 145423 . + 0 ID=cds-WP_003407809.1;Parent=gene-AL60_RS13555;Dbxref=GenBank:WP_003407809.1;Name=WP_003407809.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216087.1;locus_tag=AL60_RS13555;product=2'-5' RNA ligase family protein;protein_id=WP_003407809.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 145569 146964 . - . ID=gene-AL60_RS13560;Name=AL60_RS13560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS13560;old_locus_tag=AL60_01612;pseudo=true NZ_KK316849.1 Protein Homology CDS 145569 146964 . - 0 ID=cds-AL60_RS13560;Parent=gene-AL60_RS13560;Note=frameshifted;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293051.1;locus_tag=AL60_RS13560;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_KK316849.1 RefSeq gene 147412 148461 . + . ID=gene-AL60_RS13565;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AL60_RS13565;old_locus_tag=AL60_01614 NZ_KK316849.1 Protein Homology CDS 147412 148461 . + 0 ID=cds-WP_003898934.1;Parent=gene-AL60_RS13565;Dbxref=GenBank:WP_003898934.1;Name=WP_003898934.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216105.1;locus_tag=AL60_RS13565;product=biotin synthase BioB;protein_id=WP_003898934.1;transl_table=11 NZ_KK316849.1 RefSeq gene 148462 148701 . + . ID=gene-AL60_RS13570;Name=AL60_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13570;old_locus_tag=AL60_01615 NZ_KK316849.1 Protein Homology CDS 148462 148701 . + 0 ID=cds-WP_003407914.1;Parent=gene-AL60_RS13570;Dbxref=GenBank:WP_003407914.1;Name=WP_003407914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216106.1;locus_tag=AL60_RS13570;product=biotin synthase auxiliary protein BsaP;protein_id=WP_003407914.1;transl_table=11 NZ_KK316849.1 RefSeq gene 148698 149363 . + . ID=gene-AL60_RS13575;Name=AL60_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13575;old_locus_tag=AL60_01616 NZ_KK316849.1 Protein Homology CDS 148698 149363 . + 0 ID=cds-WP_003407924.1;Parent=gene-AL60_RS13575;Dbxref=GenBank:WP_003407924.1;Name=WP_003407924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216107.1;locus_tag=AL60_RS13575;product=DUF2567 domain-containing protein;protein_id=WP_003407924.1;transl_table=11 NZ_KK316849.1 RefSeq gene 149528 150868 . - . ID=gene-AL60_RS13580;Name=AL60_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13580;old_locus_tag=AL60_01617 NZ_KK316849.1 Protein Homology CDS 149528 150868 . - 0 ID=cds-WP_003906637.1;Parent=gene-AL60_RS13580;Dbxref=GenBank:WP_003906637.1;Name=WP_003906637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216108.1;locus_tag=AL60_RS13580;product=lipase family protein;protein_id=WP_003906637.1;transl_table=11 NZ_KK316849.1 RefSeq gene 151125 151835 . - . ID=gene-AL60_RS13585;Name=AL60_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13585;old_locus_tag=AL60_01618 NZ_KK316849.1 Protein Homology CDS 151125 151835 . - 0 ID=cds-WP_003898937.1;Parent=gene-AL60_RS13585;Dbxref=GenBank:WP_003898937.1;Name=WP_003898937.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216109.1;locus_tag=AL60_RS13585;product=NUDIX hydrolase;protein_id=WP_003898937.1;transl_table=11 NZ_KK316849.1 RefSeq gene 151884 152933 . + . ID=gene-AL60_RS13590;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AL60_RS13590;old_locus_tag=AL60_01619 NZ_KK316849.1 Protein Homology CDS 151884 152933 . + 0 ID=cds-WP_003407931.1;Parent=gene-AL60_RS13590;Dbxref=GenBank:WP_003407931.1;Name=WP_003407931.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011894476.1;locus_tag=AL60_RS13590;product=quinolinate synthase NadA;protein_id=WP_003407931.1;transl_table=11 NZ_KK316849.1 RefSeq gene 152933 154516 . + . ID=gene-AL60_RS13595;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=AL60_RS13595;old_locus_tag=AL60_01620 NZ_KK316849.1 Protein Homology CDS 152933 154516 . + 0 ID=cds-WP_003901204.1;Parent=gene-AL60_RS13595;Dbxref=GenBank:WP_003901204.1;Name=WP_003901204.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216111.1;locus_tag=AL60_RS13595;product=L-aspartate oxidase;protein_id=WP_003901204.1;transl_table=11 NZ_KK316849.1 RefSeq gene 154516 155373 . + . ID=gene-AL60_RS13600;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=AL60_RS13600;old_locus_tag=AL60_01621 NZ_KK316849.1 Protein Homology CDS 154516 155373 . + 0 ID=cds-WP_003898939.1;Parent=gene-AL60_RS13600;Dbxref=GenBank:WP_003898939.1;Name=WP_003898939.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216112.1;locus_tag=AL60_RS13600;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_003898939.1;transl_table=11 NZ_KK316849.1 RefSeq gene 155422 156180 . + . ID=gene-AL60_RS13605;Name=AL60_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13605;old_locus_tag=AL60_01622 NZ_KK316849.1 Protein Homology CDS 155422 156180 . + 0 ID=cds-WP_003898940.1;Parent=gene-AL60_RS13605;Dbxref=GenBank:WP_003898940.1;Name=WP_003898940.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216113.1;locus_tag=AL60_RS13605;product=methyltransferase domain-containing protein;protein_id=WP_003898940.1;transl_table=11 NZ_KK316849.1 RefSeq gene 156201 156611 . - . ID=gene-AL60_RS13610;Name=AL60_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13610;old_locus_tag=AL60_01623 NZ_KK316849.1 Protein Homology CDS 156201 156611 . - 0 ID=cds-WP_003407939.1;Parent=gene-AL60_RS13610;Dbxref=GenBank:WP_003407939.1;Name=WP_003407939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216114.1;locus_tag=AL60_RS13610;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003407939.1;transl_table=11 NZ_KK316849.1 RefSeq gene 156711 158027 . + . ID=gene-AL60_RS13615;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AL60_RS13615;old_locus_tag=AL60_01624 NZ_KK316849.1 Protein Homology CDS 156711 158027 . + 0 ID=cds-WP_024742861.1;Parent=gene-AL60_RS13615;Dbxref=GenBank:WP_024742861.1;Name=WP_024742861.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216115.1;locus_tag=AL60_RS13615;product=histidinol dehydrogenase;protein_id=WP_024742861.1;transl_table=11 NZ_KK316849.1 RefSeq gene 158024 159166 . + . ID=gene-AL60_RS13620;Name=AL60_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13620;old_locus_tag=AL60_01625 NZ_KK316849.1 Protein Homology CDS 158024 159166 . + 0 ID=cds-WP_012054281.1;Parent=gene-AL60_RS13620;Dbxref=GenBank:WP_012054281.1;Name=WP_012054281.1;Ontology_term=GO:0000105,GO:0004400,GO:0030170;gbkey=CDS;go_function=histidinol-phosphate transaminase activity|0004400||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177823.1;locus_tag=AL60_RS13620;product=histidinol-phosphate transaminase;protein_id=WP_012054281.1;transl_table=11 NZ_KK316849.1 RefSeq gene 159163 159795 . + . ID=gene-AL60_RS13625;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=AL60_RS13625;old_locus_tag=AL60_01626 NZ_KK316849.1 Protein Homology CDS 159163 159795 . + 0 ID=cds-WP_003407950.1;Parent=gene-AL60_RS13625;Dbxref=GenBank:WP_003407950.1;Name=WP_003407950.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216117.1;locus_tag=AL60_RS13625;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_003407950.1;transl_table=11 NZ_KK316849.1 RefSeq gene 159792 160412 . + . ID=gene-AL60_RS13630;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AL60_RS13630;old_locus_tag=AL60_01627 NZ_KK316849.1 Protein Homology CDS 159792 160412 . + 0 ID=cds-WP_003407952.1;Parent=gene-AL60_RS13630;Dbxref=GenBank:WP_003407952.1;Name=WP_003407952.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216118.1;locus_tag=AL60_RS13630;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_003407952.1;transl_table=11 NZ_KK316849.1 RefSeq gene 160422 161159 . + . ID=gene-AL60_RS13635;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AL60_RS13635;old_locus_tag=AL60_01628 NZ_KK316849.1 Protein Homology CDS 160422 161159 . + 0 ID=cds-WP_003900374.1;Parent=gene-AL60_RS13635;Dbxref=GenBank:WP_003900374.1;Name=WP_003900374.1;Ontology_term=GO:0000105,GO:0000162,GO:0003949,GO:0004640,GO:0005737;gbkey=CDS;gene=priA;go_component=cytoplasm|0005737||IEA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-histidine biosynthetic process|0000105||IEA,L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216119.1;locus_tag=AL60_RS13635;product=bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA;protein_id=WP_003900374.1;transl_table=11 NZ_KK316849.1 RefSeq gene 161167 161979 . + . ID=gene-AL60_RS13640;Name=impA;gbkey=Gene;gene=impA;gene_biotype=protein_coding;locus_tag=AL60_RS13640;old_locus_tag=AL60_01629 NZ_KK316849.1 Protein Homology CDS 161167 161979 . + 0 ID=cds-WP_003407957.1;Parent=gene-AL60_RS13640;Dbxref=GenBank:WP_003407957.1;Name=WP_003407957.1;gbkey=CDS;gene=impA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216120.1;locus_tag=AL60_RS13640;product=inositol monophosphatase family protein;protein_id=WP_003407957.1;transl_table=11 NZ_KK316849.1 RefSeq gene 161981 162784 . + . ID=gene-AL60_RS13645;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=AL60_RS13645;old_locus_tag=AL60_01630 NZ_KK316849.1 Protein Homology CDS 161981 162784 . + 0 ID=cds-WP_003898942.1;Parent=gene-AL60_RS13645;Dbxref=GenBank:WP_003898942.1;Name=WP_003898942.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216121.1;locus_tag=AL60_RS13645;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_003898942.1;transl_table=11 NZ_KK316849.1 RefSeq gene 162781 163128 . + . ID=gene-AL60_RS13650;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=AL60_RS13650;old_locus_tag=AL60_01631 NZ_KK316849.1 Protein Homology CDS 162781 163128 . + 0 ID=cds-WP_003407963.1;Parent=gene-AL60_RS13650;Dbxref=GenBank:WP_003407963.1;Name=WP_003407963.1;Ontology_term=GO:0000105,GO:0004635;gbkey=CDS;gene=hisI;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216638.2;locus_tag=AL60_RS13650;product=phosphoribosyl-AMP cyclohydrolase;protein_id=WP_003407963.1;transl_table=11 NZ_KK316849.1 RefSeq gene 163309 164391 . + . ID=gene-AL60_RS13655;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=AL60_RS13655;old_locus_tag=AL60_01632 NZ_KK316849.1 Protein Homology CDS 163309 164391 . + 0 ID=cds-WP_003898943.1;Parent=gene-AL60_RS13655;Dbxref=GenBank:WP_003898943.1;Name=WP_003898943.1;Ontology_term=GO:0006812,GO:0006816,GO:0008324,GO:0015369,GO:0016020;gbkey=CDS;gene=chaA;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,calcium:proton antiporter activity|0015369||IEA;go_process=monoatomic cation transport|0006812||IEA,calcium ion transport|0006816||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216123.1;locus_tag=AL60_RS13655;product=calcium:cation antiporter;protein_id=WP_003898943.1;transl_table=11 NZ_KK316849.1 RefSeq gene 164426 164890 . - . ID=gene-AL60_RS13660;Name=bcpB;gbkey=Gene;gene=bcpB;gene_biotype=protein_coding;locus_tag=AL60_RS13660;old_locus_tag=AL60_01633 NZ_KK316849.1 Protein Homology CDS 164426 164890 . - 0 ID=cds-WP_003407974.1;Parent=gene-AL60_RS13660;Dbxref=GenBank:WP_003407974.1;Name=WP_003407974.1;gbkey=CDS;gene=bcpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216124.1;locus_tag=AL60_RS13660;product=peroxiredoxin BcpB;protein_id=WP_003407974.1;transl_table=11 NZ_KK316849.1 RefSeq gene 165031 166581 . + . ID=gene-AL60_RS13665;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=AL60_RS13665;old_locus_tag=AL60_01634 NZ_KK316849.1 Protein Homology CDS 165031 166581 . + 0 ID=cds-WP_003407977.1;Parent=gene-AL60_RS13665;Dbxref=GenBank:WP_003407977.1;Name=WP_003407977.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216125.1;locus_tag=AL60_RS13665;product=anthranilate synthase component I;protein_id=WP_003407977.1;transl_table=11 NZ_KK316849.1 RefSeq gene 166571 167278 . + . ID=gene-AL60_RS13670;Name=AL60_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13670;old_locus_tag=AL60_01635 NZ_KK316849.1 Protein Homology CDS 166571 167278 . + 0 ID=cds-WP_003407980.1;Parent=gene-AL60_RS13670;Dbxref=GenBank:WP_003407980.1;Name=WP_003407980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216126.1;locus_tag=AL60_RS13670;product=TIGR02234 family membrane protein;protein_id=WP_003407980.1;transl_table=11 NZ_KK316849.1 RefSeq gene 167368 168186 . + . ID=gene-AL60_RS13675;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=AL60_RS13675;old_locus_tag=AL60_01636 NZ_KK316849.1 Protein Homology CDS 167368 168186 . + 0 ID=cds-WP_031685273.1;Parent=gene-AL60_RS13675;Dbxref=GenBank:WP_031685273.1;Name=WP_031685273.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216127.1;locus_tag=AL60_RS13675;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_031685273.1;transl_table=11 NZ_KK316849.1 RefSeq gene 168222 169487 . + . ID=gene-AL60_RS13680;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=AL60_RS13680;old_locus_tag=AL60_01637 NZ_KK316849.1 Protein Homology CDS 168222 169487 . + 0 ID=cds-WP_016721143.1;Parent=gene-AL60_RS13680;Dbxref=GenBank:WP_016721143.1;Name=WP_016721143.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016721143.1;locus_tag=AL60_RS13680;product=tryptophan synthase subunit beta;protein_id=WP_016721143.1;transl_table=11 NZ_KK316849.1 RefSeq gene 169487 170299 . + . ID=gene-AL60_RS13685;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=AL60_RS13685;old_locus_tag=AL60_01638 NZ_KK316849.1 Protein Homology CDS 169487 170299 . + 0 ID=cds-WP_003407999.1;Parent=gene-AL60_RS13685;Dbxref=GenBank:WP_003407999.1;Name=WP_003407999.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216129.1;locus_tag=AL60_RS13685;product=tryptophan synthase subunit alpha;protein_id=WP_003407999.1;transl_table=11 NZ_KK316849.1 RefSeq gene 170299 171705 . + . ID=gene-AL60_RS13690;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=AL60_RS13690;old_locus_tag=AL60_01639 NZ_KK316849.1 Protein Homology CDS 170299 171705 . + 0 ID=cds-WP_012054284.1;Parent=gene-AL60_RS13690;Dbxref=GenBank:WP_012054284.1;Name=WP_012054284.1;gbkey=CDS;gene=lgt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216130.1;locus_tag=AL60_RS13690;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_012054284.1;transl_table=11 NZ_KK316849.1 RefSeq gene 172381 172821 . + . ID=gene-AL60_RS13695;Name=AL60_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13695;old_locus_tag=AL60_01640 NZ_KK316849.1 Protein Homology CDS 172381 172821 . + 0 ID=cds-WP_003408004.1;Parent=gene-AL60_RS13695;Dbxref=GenBank:WP_003408004.1;Name=WP_003408004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216131.1;locus_tag=AL60_RS13695;product=NINE protein;protein_id=WP_003408004.1;transl_table=11 NZ_KK316849.1 RefSeq gene 172811 173209 . + . ID=gene-AL60_RS13700;Name=AL60_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13700;old_locus_tag=AL60_01641 NZ_KK316849.1 Protein Homology CDS 172811 173209 . + 0 ID=cds-WP_003408005.1;Parent=gene-AL60_RS13700;Dbxref=GenBank:WP_003408005.1;Name=WP_003408005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216132.1;locus_tag=AL60_RS13700;product=DUF2752 domain-containing protein;protein_id=WP_003408005.1;transl_table=11 NZ_KK316849.1 RefSeq gene 173317 174735 . + . ID=gene-AL60_RS13705;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=AL60_RS13705;old_locus_tag=AL60_01642 NZ_KK316849.1 Protein Homology CDS 173317 174735 . + 0 ID=cds-WP_003898945.1;Parent=gene-AL60_RS13705;Dbxref=GenBank:WP_003898945.1;Name=WP_003898945.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216133.1;locus_tag=AL60_RS13705;product=pyruvate kinase;protein_id=WP_003898945.1;transl_table=11 NZ_KK316849.1 RefSeq gene 174743 175645 . + . ID=gene-AL60_RS13710;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AL60_RS13710;old_locus_tag=AL60_01643 NZ_KK316849.1 Protein Homology CDS 174743 175645 . + 0 ID=cds-WP_003408017.1;Parent=gene-AL60_RS13710;Dbxref=GenBank:WP_003408017.1;Name=WP_003408017.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216134.1;locus_tag=AL60_RS13710;product=acyl-CoA thioesterase II;protein_id=WP_003408017.1;transl_table=11 NZ_KK316849.1 RefSeq gene 175703 177157 . + . ID=gene-AL60_RS13715;Name=AL60_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13715;old_locus_tag=AL60_01644 NZ_KK316849.1 Protein Homology CDS 175703 177157 . + 0 ID=cds-WP_003900378.1;Parent=gene-AL60_RS13715;Dbxref=GenBank:WP_003900378.1;Name=WP_003900378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216135.1;locus_tag=AL60_RS13715;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_003900378.1;transl_table=11 NZ_KK316849.1 RefSeq gene 177091 178821 . - . ID=gene-AL60_RS13720;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=AL60_RS13720;old_locus_tag=AL60_01645 NZ_KK316849.1 Protein Homology CDS 177091 178821 . - 0 ID=cds-WP_003908715.1;Parent=gene-AL60_RS13720;Dbxref=GenBank:WP_003908715.1;Name=WP_003908715.1;Ontology_term=GO:0033228,GO:0045454,GO:0005524,GO:0033230,GO:0050456,GO:0016020,GO:0055051;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA,L-cystine reductase (NADH) activity|0050456||IEA;go_process=cysteine export across plasma membrane|0033228||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216136.1;locus_tag=AL60_RS13720;product=thiol reductant ABC exporter subunit CydC;protein_id=WP_003908715.1;transl_table=11 NZ_KK316849.1 RefSeq gene 178818 180425 . - . ID=gene-AL60_RS13725;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=AL60_RS13725;old_locus_tag=AL60_01646 NZ_KK316849.1 Protein Homology CDS 178818 180425 . - 0 ID=cds-WP_071854213.1;Parent=gene-AL60_RS13725;Dbxref=GenBank:WP_071854213.1;Name=WP_071854213.1;Ontology_term=GO:0033228,GO:0045454,GO:0005524,GO:0033230,GO:0050456,GO:0016020,GO:0055051;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA,L-cystine reductase (NADH) activity|0050456||IEA;go_process=cysteine export across plasma membrane|0033228||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020725080.1;locus_tag=AL60_RS13725;product=thiol reductant ABC exporter subunit CydD;protein_id=WP_071854213.1;transl_table=11 NZ_KK316849.1 RefSeq gene 180488 181528 . - . ID=gene-AL60_RS13730;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=AL60_RS13730;old_locus_tag=AL60_01647 NZ_KK316849.1 Protein Homology CDS 180488 181528 . - 0 ID=cds-WP_003408024.1;Parent=gene-AL60_RS13730;Dbxref=GenBank:WP_003408024.1;Name=WP_003408024.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216138.1;locus_tag=AL60_RS13730;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_003408024.1;transl_table=11 NZ_KK316849.1 RefSeq gene 181558 183015 . - . ID=gene-AL60_RS13735;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=AL60_RS13735;old_locus_tag=AL60_01648 NZ_KK316849.1 Protein Homology CDS 181558 183015 . - 0 ID=cds-WP_003408027.1;Parent=gene-AL60_RS13735;Dbxref=GenBank:WP_003408027.1;Name=WP_003408027.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;gene=cydA;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177824.1;locus_tag=AL60_RS13735;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_003408027.1;transl_table=11 NZ_KK316849.1 RefSeq gene 183126 183713 . - . ID=gene-AL60_RS13740;Name=AL60_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13740;old_locus_tag=AL60_01649 NZ_KK316849.1 Protein Homology CDS 183126 183713 . - 0 ID=cds-WP_003898948.1;Parent=gene-AL60_RS13740;Dbxref=GenBank:WP_003898948.1;Name=WP_003898948.1;Ontology_term=GO:0009268;gbkey=CDS;go_process=response to pH|0009268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216140.1;locus_tag=AL60_RS13740;product=HdeD family acid-resistance protein;protein_id=WP_003898948.1;transl_table=11 NZ_KK316849.1 RefSeq gene 183742 185073 . - . ID=gene-AL60_RS13745;Name=cya;gbkey=Gene;gene=cya;gene_biotype=protein_coding;locus_tag=AL60_RS13745;old_locus_tag=AL60_01650 NZ_KK316849.1 Protein Homology CDS 183742 185073 . - 0 ID=cds-WP_003408035.1;Parent=gene-AL60_RS13745;Dbxref=GenBank:WP_003408035.1;Name=WP_003408035.1;gbkey=CDS;gene=cya;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216141.2;locus_tag=AL60_RS13745;product=adenylate cyclase;protein_id=WP_003408035.1;transl_table=11 NZ_KK316849.1 RefSeq gene 185140 185216 . - . ID=gene-AL60_RS13750;Name=AL60_RS13750;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS13750;old_locus_tag=AL60_01651 NZ_KK316849.1 tRNAscan-SE tRNA 185140 185216 . - . ID=rna-AL60_RS13750;Parent=gene-AL60_RS13750;anticodon=(pos:complement(185180..185182));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS13750;product=tRNA-Leu NZ_KK316849.1 tRNAscan-SE exon 185140 185216 . - . ID=exon-AL60_RS13750-1;Parent=rna-AL60_RS13750;anticodon=(pos:complement(185180..185182));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS13750;product=tRNA-Leu NZ_KK316849.1 RefSeq gene 185308 185925 . + . ID=gene-AL60_RS13755;Name=AL60_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13755;old_locus_tag=AL60_01652 NZ_KK316849.1 Protein Homology CDS 185308 185925 . + 0 ID=cds-WP_003408045.1;Parent=gene-AL60_RS13755;Dbxref=GenBank:WP_003408045.1;Name=WP_003408045.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216142.1;locus_tag=AL60_RS13755;product=ANTAR domain-containing response regulator;protein_id=WP_003408045.1;transl_table=11 NZ_KK316849.1 RefSeq gene 185993 187201 . - . ID=gene-AL60_RS13760;Name=AL60_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13760;old_locus_tag=AL60_01653 NZ_KK316849.1 Protein Homology CDS 185993 187201 . - 0 ID=cds-WP_003408054.1;Parent=gene-AL60_RS13760;Dbxref=GenBank:WP_003408054.1;Name=WP_003408054.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216143.1;locus_tag=AL60_RS13760;product=lipid-transfer protein;protein_id=WP_003408054.1;transl_table=11 NZ_KK316849.1 RefSeq gene 187198 187689 . - . ID=gene-AL60_RS13765;Name=AL60_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13765;old_locus_tag=AL60_01654 NZ_KK316849.1 Protein Homology CDS 187198 187689 . - 0 ID=cds-WP_003408058.1;Parent=gene-AL60_RS13765;Dbxref=GenBank:WP_003408058.1;Name=WP_003408058.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216144.1;locus_tag=AL60_RS13765;product=Zn-ribbon domain-containing OB-fold protein;protein_id=WP_003408058.1;transl_table=11 NZ_KK316849.1 RefSeq gene 187793 190507 . + . ID=gene-AL60_RS13770;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AL60_RS13770;old_locus_tag=AL60_01655 NZ_KK316849.1 Protein Homology CDS 187793 190507 . + 0 ID=cds-WP_003408063.1;Parent=gene-AL60_RS13770;Dbxref=GenBank:WP_003408063.1;Name=WP_003408063.1;Ontology_term=GO:0006260,GO:0003887;gbkey=CDS;gene=polA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216145.1;locus_tag=AL60_RS13770;product=DNA polymerase I;protein_id=WP_003408063.1;transl_table=11 NZ_KK316849.1 RefSeq gene 190670 192115 . + . ID=gene-AL60_RS13775;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AL60_RS13775;old_locus_tag=AL60_01656 NZ_KK316849.1 Protein Homology CDS 190670 192115 . + 0 ID=cds-WP_003408066.1;Parent=gene-AL60_RS13775;Dbxref=GenBank:WP_003408066.1;Name=WP_003408066.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216146.1;locus_tag=AL60_RS13775;product=30S ribosomal protein S1;protein_id=WP_003408066.1;transl_table=11 NZ_KK316849.1 RefSeq gene 192141 193364 . + . ID=gene-AL60_RS13780;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AL60_RS13780;old_locus_tag=AL60_01657 NZ_KK316849.1 Protein Homology CDS 192141 193364 . + 0 ID=cds-WP_003408069.1;Parent=gene-AL60_RS13780;Dbxref=GenBank:WP_003408069.1;Name=WP_003408069.1;Ontology_term=GO:0015937,GO:0004140,GO:0005524;gbkey=CDS;gene=coaE;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216147.1;locus_tag=AL60_RS13780;product=dephospho-CoA kinase;protein_id=WP_003408069.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 193403 193519 . + . ID=gene-AL60_RS28125;Name=AL60_RS28125;end_range=193519,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28125;partial=true;pseudo=true;start_range=.,193403 NZ_KK316849.1 Protein Homology CDS 193403 193519 . + 0 ID=cds-AL60_RS28125;Parent=gene-AL60_RS28125;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=193519,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216242.1;locus_tag=AL60_RS28125;partial=true;product=hypothetical protein;pseudo=true;start_range=.,193403;transl_table=11 NZ_KK316849.1 RefSeq gene 193515 193958 . - . ID=gene-AL60_RS13785;Name=AL60_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13785;old_locus_tag=AL60_01658 NZ_KK316849.1 Protein Homology CDS 193515 193958 . - 0 ID=cds-WP_003898953.1;Parent=gene-AL60_RS13785;Dbxref=GenBank:WP_003898953.1;Name=WP_003898953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216148.1;locus_tag=AL60_RS13785;product=ribonuclease FAU-1 family protein;protein_id=WP_003898953.1;transl_table=11 NZ_KK316849.1 RefSeq gene 194140 196299 . + . ID=gene-AL60_RS13790;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AL60_RS13790;old_locus_tag=AL60_01659 NZ_KK316849.1 Protein Homology CDS 194140 196299 . + 0 ID=cds-WP_023641693.1;Parent=gene-AL60_RS13790;Dbxref=GenBank:WP_023641693.1;Name=WP_023641693.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019731486.1;locus_tag=AL60_RS13790;product=excinuclease ABC subunit UvrB;protein_id=WP_023641693.1;transl_table=11 NZ_KK316849.1 RefSeq gene 196296 197711 . + . ID=gene-AL60_RS13795;Name=AL60_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13795;old_locus_tag=AL60_01660 NZ_KK316849.1 Protein Homology CDS 196296 197711 . + 0 ID=cds-WP_003898954.1;Parent=gene-AL60_RS13795;Dbxref=GenBank:WP_003898954.1;Name=WP_003898954.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216150.1;locus_tag=AL60_RS13795;product=MFS transporter;protein_id=WP_003898954.1;transl_table=11 NZ_KK316849.1 RefSeq gene 197700 199370 . - . ID=gene-AL60_RS13800;Name=AL60_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13800;old_locus_tag=AL60_01661 NZ_KK316849.1 Protein Homology CDS 197700 199370 . - 0 ID=cds-WP_003408080.1;Parent=gene-AL60_RS13800;Dbxref=GenBank:WP_003408080.1;Name=WP_003408080.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216151.1;locus_tag=AL60_RS13800;product=mannosyltransferase;protein_id=WP_003408080.1;transl_table=11 NZ_KK316849.1 RefSeq gene 199296 199556 . + . ID=gene-AL60_RS25880;Name=AL60_RS25880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25880 NZ_KK316849.1 Protein Homology CDS 199296 199556 . + 0 ID=cds-WP_078440956.1;Parent=gene-AL60_RS25880;Dbxref=GenBank:WP_078440956.1;Name=WP_078440956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003905612.1;locus_tag=AL60_RS25880;product=hypothetical protein;protein_id=WP_078440956.1;transl_table=11 NZ_KK316849.1 RefSeq gene 199579 200019 . + . ID=gene-AL60_RS13805;Name=AL60_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13805;old_locus_tag=AL60_01662 NZ_KK316849.1 Protein Homology CDS 199579 200019 . + 0 ID=cds-WP_003408085.1;Parent=gene-AL60_RS13805;Dbxref=GenBank:WP_003408085.1;Name=WP_003408085.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216152.1;locus_tag=AL60_RS13805;product=universal stress protein;protein_id=WP_003408085.1;transl_table=11 NZ_KK316849.1 RefSeq gene 200026 200703 . - . ID=gene-AL60_RS13810;Name=AL60_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13810;old_locus_tag=AL60_01663 NZ_KK316849.1 Protein Homology CDS 200026 200703 . - 0 ID=cds-WP_003408088.1;Parent=gene-AL60_RS13810;Dbxref=GenBank:WP_003408088.1;Name=WP_003408088.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003408088.1;locus_tag=AL60_RS13810;product=MBL fold metallo-hydrolase;protein_id=WP_003408088.1;transl_table=11 NZ_KK316849.1 RefSeq gene 200869 203787 . + . ID=gene-AL60_RS13815;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AL60_RS13815;old_locus_tag=AL60_01664 NZ_KK316849.1 Protein Homology CDS 200869 203787 . + 0 ID=cds-WP_003408092.1;Parent=gene-AL60_RS13815;Dbxref=GenBank:WP_003408092.1;Name=WP_003408092.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216154.1;locus_tag=AL60_RS13815;product=excinuclease ABC subunit UvrA;protein_id=WP_003408092.1;transl_table=11 NZ_KK316849.1 RefSeq gene 203844 204101 . - . ID=gene-AL60_RS13820;Name=AL60_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13820;old_locus_tag=AL60_01665 NZ_KK316849.1 Protein Homology CDS 203844 204101 . - 0 ID=cds-WP_003408096.1;Parent=gene-AL60_RS13820;Dbxref=GenBank:WP_003408096.1;Name=WP_003408096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177650.1;locus_tag=AL60_RS13820;product=PspA/IM30 family protein;protein_id=WP_003408096.1;transl_table=11 NZ_KK316849.1 RefSeq gene 204117 205586 . - . ID=gene-AL60_RS13825;Name=AL60_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13825;old_locus_tag=AL60_01666 NZ_KK316849.1 Protein Homology CDS 204117 205586 . - 0 ID=cds-WP_003408099.1;Parent=gene-AL60_RS13825;Dbxref=GenBank:WP_003408099.1;Name=WP_003408099.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216155.1;locus_tag=AL60_RS13825;product=alpha/beta hydrolase;protein_id=WP_003408099.1;transl_table=11 NZ_KK316849.1 RefSeq gene 205645 208980 . - . ID=gene-AL60_RS13830;Name=lysX;gbkey=Gene;gene=lysX;gene_biotype=protein_coding;locus_tag=AL60_RS13830;old_locus_tag=AL60_01667 NZ_KK316849.1 Protein Homology CDS 205645 208980 . - 0 ID=cds-WP_003918287.1;Parent=gene-AL60_RS13830;Dbxref=GenBank:WP_003918287.1;Name=WP_003918287.1;Ontology_term=GO:0006430,GO:0000166,GO:0003676,GO:0004824,GO:0005524;gbkey=CDS;gene=lysX;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011560376.1;locus_tag=AL60_RS13830;product=bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX;protein_id=WP_003918287.1;transl_table=11 NZ_KK316849.1 RefSeq gene 209401 210006 . + . ID=gene-AL60_RS13835;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AL60_RS13835;old_locus_tag=AL60_01668 NZ_KK316849.1 Protein Homology CDS 209401 210006 . + 0 ID=cds-WP_003901217.1;Parent=gene-AL60_RS13835;Dbxref=GenBank:WP_003901217.1;Name=WP_003901217.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216157.1;locus_tag=AL60_RS13835;product=translation initiation factor IF-3;protein_id=WP_003901217.1;transl_table=11 NZ_KK316849.1 RefSeq gene 210056 210250 . + . ID=gene-AL60_RS13840;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AL60_RS13840;old_locus_tag=AL60_01669 NZ_KK316849.1 Protein Homology CDS 210056 210250 . + 0 ID=cds-WP_003408106.1;Parent=gene-AL60_RS13840;Dbxref=GenBank:WP_003408106.1;Name=WP_003408106.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003876267.1;locus_tag=AL60_RS13840;product=50S ribosomal protein L35;protein_id=WP_003408106.1;transl_table=11 NZ_KK316849.1 RefSeq gene 210312 210701 . + . ID=gene-AL60_RS13845;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AL60_RS13845;old_locus_tag=AL60_01670 NZ_KK316849.1 Protein Homology CDS 210312 210701 . + 0 ID=cds-WP_003408108.1;Parent=gene-AL60_RS13845;Dbxref=GenBank:WP_003408108.1;Name=WP_003408108.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216159.1;locus_tag=AL60_RS13845;product=50S ribosomal protein L20;protein_id=WP_003408108.1;transl_table=11 NZ_KK316849.1 RefSeq gene 210734 211516 . + . ID=gene-AL60_RS13850;Name=tsnR;gbkey=Gene;gene=tsnR;gene_biotype=protein_coding;locus_tag=AL60_RS13850;old_locus_tag=AL60_01671 NZ_KK316849.1 Protein Homology CDS 210734 211516 . + 0 ID=cds-WP_003408112.1;Parent=gene-AL60_RS13850;Dbxref=GenBank:WP_003408112.1;Name=WP_003408112.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;gene=tsnR;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216160.1;locus_tag=AL60_RS13850;product=TrmH family RNA methyltransferase;protein_id=WP_003408112.1;transl_table=11 NZ_KK316849.1 RefSeq gene 211527 212582 . - . ID=gene-AL60_RS13855;Name=AL60_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13855;old_locus_tag=AL60_01672 NZ_KK316849.1 Protein Homology CDS 211527 212582 . - 0 ID=cds-WP_003408141.1;Parent=gene-AL60_RS13855;Dbxref=GenBank:WP_003408141.1;Name=WP_003408141.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216161.1;locus_tag=AL60_RS13855;product=oxygenase MpaB family protein;protein_id=WP_003408141.1;transl_table=11 NZ_KK316849.1 RefSeq gene 212892 213824 . + . ID=gene-AL60_RS13860;Name=AL60_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13860;old_locus_tag=AL60_01673 NZ_KK316849.1 Protein Homology CDS 212892 213824 . + 0 ID=cds-WP_003900384.1;Parent=gene-AL60_RS13860;Dbxref=GenBank:WP_003900384.1;Name=WP_003900384.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177825.1;locus_tag=AL60_RS13860;product=PE family protein;protein_id=WP_003900384.1;transl_table=11 NZ_KK316849.1 RefSeq gene 213938 214852 . + . ID=gene-AL60_RS13865;Name=AL60_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13865;old_locus_tag=AL60_01674 NZ_KK316849.1 Protein Homology CDS 213938 214852 . + 0 ID=cds-WP_003913695.1;Parent=gene-AL60_RS13865;Dbxref=GenBank:WP_003913695.1;Name=WP_003913695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913695.1;locus_tag=AL60_RS13865;product=adenylate cyclase;protein_id=WP_003913695.1;transl_table=11 NZ_KK316849.1 RefSeq gene 214859 215665 . + . ID=gene-AL60_RS13870;Name=AL60_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13870;old_locus_tag=AL60_01675 NZ_KK316849.1 Protein Homology CDS 214859 215665 . + 0 ID=cds-WP_003408145.1;Parent=gene-AL60_RS13870;Dbxref=GenBank:WP_003408145.1;Name=WP_003408145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216164.1;locus_tag=AL60_RS13870;product=rhomboid-like protein;protein_id=WP_003408145.1;transl_table=11 NZ_KK316849.1 RefSeq gene 215861 216886 . + . ID=gene-AL60_RS13875;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AL60_RS13875;old_locus_tag=AL60_01676 NZ_KK316849.1 Protein Homology CDS 215861 216886 . + 0 ID=cds-WP_003906646.1;Parent=gene-AL60_RS13875;Dbxref=GenBank:WP_003906646.1;Name=WP_003906646.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003920416.1;locus_tag=AL60_RS13875;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_003906646.1;transl_table=11 NZ_KK316849.1 RefSeq gene 216886 219381 . + . ID=gene-AL60_RS13880;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AL60_RS13880;old_locus_tag=AL60_01677 NZ_KK316849.1 Protein Homology CDS 216886 219381 . + 0 ID=cds-WP_012054287.1;Parent=gene-AL60_RS13880;Dbxref=GenBank:WP_012054287.1;Name=WP_012054287.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216166.1;locus_tag=AL60_RS13880;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_012054287.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 219475 222509 . - . ID=gene-AL60_RS25885;Name=AL60_RS25885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS25885;pseudo=true NZ_KK316849.1 Protein Homology CDS 219475 222509 . - 0 ID=cds-AL60_RS25885;Parent=gene-AL60_RS25885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177826.1;locus_tag=AL60_RS25885;product=PE domain-containing protein;pseudo=true;transl_table=11 NZ_KK316849.1 RefSeq gene 222703 223761 . + . ID=gene-AL60_RS13890;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=AL60_RS13890;old_locus_tag=AL60_01679 NZ_KK316849.1 Protein Homology CDS 222703 223761 . + 0 ID=cds-WP_003898960.1;Parent=gene-AL60_RS13890;Dbxref=GenBank:WP_003898960.1;Name=WP_003898960.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216168.1;locus_tag=AL60_RS13890;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_003898960.1;transl_table=11 NZ_KK316849.1 RefSeq gene 223758 224972 . + . ID=gene-AL60_RS13895;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=AL60_RS13895;old_locus_tag=AL60_01680 NZ_KK316849.1 Protein Homology CDS 223758 224972 . + 0 ID=cds-WP_003408160.1;Parent=gene-AL60_RS13895;Dbxref=GenBank:WP_003408160.1;Name=WP_003408160.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=L-glutamate N-acetyltransferase activity%2C acting on acetyl-L-ornithine as donor|0004358||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216169.1;locus_tag=AL60_RS13895;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_003408160.1;transl_table=11 NZ_KK316849.1 RefSeq gene 224969 225853 . + . ID=gene-AL60_RS13900;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=AL60_RS13900;old_locus_tag=AL60_01681 NZ_KK316849.1 Protein Homology CDS 224969 225853 . + 0 ID=cds-WP_003408161.1;Parent=gene-AL60_RS13900;Dbxref=GenBank:WP_003408161.1;Name=WP_003408161.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216170.1;locus_tag=AL60_RS13900;product=acetylglutamate kinase;protein_id=WP_003408161.1;transl_table=11 NZ_KK316849.1 RefSeq gene 225850 227052 . + . ID=gene-AL60_RS13905;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=AL60_RS13905;old_locus_tag=AL60_01682 NZ_KK316849.1 Protein Homology CDS 225850 227052 . + 0 ID=cds-WP_003408163.1;Parent=gene-AL60_RS13905;Dbxref=GenBank:WP_003408163.1;Name=WP_003408163.1;Ontology_term=GO:0006525,GO:0008483,GO:0030170;gbkey=CDS;gene=argD;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216171.1;locus_tag=AL60_RS13905;product=acetylornithine transaminase;protein_id=WP_003408163.1;transl_table=11 NZ_KK316849.1 RefSeq gene 227049 227972 . + . ID=gene-AL60_RS13910;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=AL60_RS13910;old_locus_tag=AL60_01683 NZ_KK316849.1 Protein Homology CDS 227049 227972 . + 0 ID=cds-WP_003408165.1;Parent=gene-AL60_RS13910;Dbxref=GenBank:WP_003408165.1;Name=WP_003408165.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216172.1;locus_tag=AL60_RS13910;product=ornithine carbamoyltransferase;protein_id=WP_003408165.1;transl_table=11 NZ_KK316849.1 RefSeq gene 227969 228481 . + . ID=gene-AL60_RS13915;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=AL60_RS13915;old_locus_tag=AL60_01684 NZ_KK316849.1 Protein Homology CDS 227969 228481 . + 0 ID=cds-WP_003408178.1;Parent=gene-AL60_RS13915;Dbxref=GenBank:WP_003408178.1;Name=WP_003408178.1;Ontology_term=GO:0006355,GO:0006525,GO:0003700;gbkey=CDS;gene=argR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216173.1;locus_tag=AL60_RS13915;product=arginine repressor;protein_id=WP_003408178.1;transl_table=11 NZ_KK316849.1 RefSeq gene 228490 229686 . + . ID=gene-AL60_RS13920;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=AL60_RS13920;old_locus_tag=AL60_01685 NZ_KK316849.1 Protein Homology CDS 228490 229686 . + 0 ID=cds-WP_003408179.1;Parent=gene-AL60_RS13920;Dbxref=GenBank:WP_003408179.1;Name=WP_003408179.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216174.1;locus_tag=AL60_RS13920;product=argininosuccinate synthase;protein_id=WP_003408179.1;transl_table=11 NZ_KK316849.1 RefSeq gene 229766 231178 . + . ID=gene-AL60_RS13925;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=AL60_RS13925;old_locus_tag=AL60_01686 NZ_KK316849.1 Protein Homology CDS 229766 231178 . + 0 ID=cds-WP_003408180.1;Parent=gene-AL60_RS13925;Dbxref=GenBank:WP_003408180.1;Name=WP_003408180.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216175.1;locus_tag=AL60_RS13925;product=argininosuccinate lyase;protein_id=WP_003408180.1;transl_table=11 NZ_KK316849.1 RefSeq gene 231287 232348 . + . ID=gene-AL60_RS13930;Name=AL60_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13930;old_locus_tag=AL60_01687 NZ_KK316849.1 Protein Homology CDS 231287 232348 . + 0 ID=cds-WP_003408181.1;Parent=gene-AL60_RS13930;Dbxref=GenBank:WP_003408181.1;Name=WP_003408181.1;Ontology_term=GO:0030639,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216176.1;locus_tag=AL60_RS13930;product=type III polyketide synthase;protein_id=WP_003408181.1;transl_table=11 NZ_KK316849.1 RefSeq gene 232431 238811 . + . ID=gene-AL60_RS13935;Name=AL60_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13935;old_locus_tag=AL60_01688 NZ_KK316849.1 Protein Homology CDS 232431 238811 . + 0 ID=cds-WP_031721496.1;Parent=gene-AL60_RS13935;Dbxref=GenBank:WP_031721496.1;Name=WP_031721496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216177.1;locus_tag=AL60_RS13935;product=type I polyketide synthase;protein_id=WP_031721496.1;transl_table=11 NZ_KK316849.1 RefSeq gene 238831 243639 . + . ID=gene-AL60_RS13940;Name=AL60_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13940;old_locus_tag=AL60_01689 NZ_KK316849.1 Protein Homology CDS 238831 243639 . + 0 ID=cds-WP_012054289.1;Parent=gene-AL60_RS13940;Dbxref=GenBank:WP_012054289.1;Name=WP_012054289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216178.1;locus_tag=AL60_RS13940;product=type I polyketide synthase;protein_id=WP_012054289.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 243669 244295 . + . ID=gene-AL60_RS28130;Name=AL60_RS28130;end_range=244295,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28130;partial=true;pseudo=true NZ_KK316849.1 Protein Homology CDS 243669 244295 . + 0 ID=cds-AL60_RS28130;Parent=gene-AL60_RS28130;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=244295,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020243.6;locus_tag=AL60_RS28130;partial=true;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 244614 244880 . + . ID=gene-AL60_RS28135;Name=AL60_RS28135;end_range=244880,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28135;partial=true;pseudo=true;start_range=.,244614 NZ_KK316849.1 Protein Homology CDS 244614 244880 . + 0 ID=cds-AL60_RS28135;Parent=gene-AL60_RS28135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006633,GO:0000035,GO:0000036;end_range=244880,.;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003876285.1;locus_tag=AL60_RS28135;partial=true;product=acyl carrier protein;pseudo=true;start_range=.,244614;transl_table=11 NZ_KK316849.1 RefSeq gene 245153 248206 . + . ID=gene-AL60_RS13950;Name=AL60_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13950;old_locus_tag=AL60_01691 NZ_KK316849.1 Protein Homology CDS 245153 248206 . + 0 ID=cds-WP_003900389.1;Parent=gene-AL60_RS13950;Dbxref=GenBank:WP_003900389.1;Name=WP_003900389.1;Ontology_term=GO:0006633,GO:0030639,GO:0034081;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216180.1;locus_tag=AL60_RS13950;product=type I polyketide synthase;protein_id=WP_003900389.1;transl_table=11 NZ_KK316849.1 RefSeq gene 248353 249414 . + . ID=gene-AL60_RS13955;Name=AL60_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13955;old_locus_tag=AL60_01692 NZ_KK316849.1 Protein Homology CDS 248353 249414 . + 0 ID=cds-WP_003408248.1;Parent=gene-AL60_RS13955;Dbxref=GenBank:WP_003408248.1;Name=WP_003408248.1;Ontology_term=GO:0030639,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216181.1;locus_tag=AL60_RS13955;product=type III polyketide synthase;protein_id=WP_003408248.1;transl_table=11 NZ_KK316849.1 RefSeq gene 249397 250689 . - . ID=gene-AL60_RS13960;Name=AL60_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13960;old_locus_tag=AL60_01693 NZ_KK316849.1 Protein Homology CDS 249397 250689 . - 0 ID=cds-WP_003901231.1;Parent=gene-AL60_RS13960;Dbxref=GenBank:WP_003901231.1;Name=WP_003901231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216182.1;locus_tag=AL60_RS13960;product=cytochrome P450;protein_id=WP_003901231.1;transl_table=11 NZ_KK316849.1 RefSeq gene 250704 252479 . - . ID=gene-AL60_RS0104595;Name=AL60_RS0104595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104595 NZ_KK316849.1 Protein Homology CDS 250704 252479 . - 0 ID=cds-WP_003408257.1;Parent=gene-AL60_RS0104595;Dbxref=GenBank:WP_003408257.1;Name=WP_003408257.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303143.1;locus_tag=AL60_RS0104595;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_003408257.1;transl_table=11 NZ_KK316849.1 RefSeq gene 252862 253224 . + . ID=gene-AL60_RS13965;Name=AL60_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13965;old_locus_tag=AL60_01696 NZ_KK316849.1 Protein Homology CDS 252862 253224 . + 0 ID=cds-WP_003901232.1;Parent=gene-AL60_RS13965;Dbxref=GenBank:WP_003901232.1;Name=WP_003901232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216185.1;locus_tag=AL60_RS13965;product=hypothetical protein;protein_id=WP_003901232.1;transl_table=11 NZ_KK316849.1 RefSeq gene 253257 253604 . + . ID=gene-AL60_RS13970;Name=AL60_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13970;old_locus_tag=AL60_01697 NZ_KK316849.1 Protein Homology CDS 253257 253604 . + 0 ID=cds-WP_003408261.1;Parent=gene-AL60_RS13970;Dbxref=GenBank:WP_003408261.1;Name=WP_003408261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216186.1;locus_tag=AL60_RS13970;product=DUF427 domain-containing protein;protein_id=WP_003408261.1;transl_table=11 NZ_KK316849.1 RefSeq gene 253612 254004 . + . ID=gene-AL60_RS13975;Name=AL60_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13975;old_locus_tag=AL60_01698 NZ_KK316849.1 Protein Homology CDS 253612 254004 . + 0 ID=cds-WP_003408263.1;Parent=gene-AL60_RS13975;Dbxref=GenBank:WP_003408263.1;Name=WP_003408263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216187.1;locus_tag=AL60_RS13975;product=hypothetical protein;protein_id=WP_003408263.1;transl_table=11 NZ_KK316849.1 RefSeq gene 254013 255344 . - . ID=gene-AL60_RS13980;Name=AL60_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13980;old_locus_tag=AL60_01699 NZ_KK316849.1 Protein Homology CDS 254013 255344 . - 0 ID=cds-WP_003408264.1;Parent=gene-AL60_RS13980;Dbxref=GenBank:WP_003408264.1;Name=WP_003408264.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216188.1;locus_tag=AL60_RS13980;product=MFS transporter;protein_id=WP_003408264.1;transl_table=11 NZ_KK316849.1 RefSeq gene 255437 256369 . - . ID=gene-AL60_RS13985;Name=AL60_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13985;old_locus_tag=AL60_01700 NZ_KK316849.1 Protein Homology CDS 255437 256369 . - 0 ID=cds-WP_003408265.1;Parent=gene-AL60_RS13985;Dbxref=GenBank:WP_003408265.1;Name=WP_003408265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216189.1;locus_tag=AL60_RS13985;product=transglutaminase-like domain-containing protein;protein_id=WP_003408265.1;transl_table=11 NZ_KK316849.1 RefSeq gene 256397 257053 . - . ID=gene-AL60_RS13990;Name=AL60_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS13990;old_locus_tag=AL60_01701 NZ_KK316849.1 Protein Homology CDS 256397 257053 . - 0 ID=cds-WP_003906655.1;Parent=gene-AL60_RS13990;Dbxref=GenBank:WP_003906655.1;Name=WP_003906655.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216190.1;locus_tag=AL60_RS13990;product=ArsR/SmtB family transcription factor;protein_id=WP_003906655.1;transl_table=11 NZ_KK316849.1 RefSeq gene 257238 257384 . + . ID=gene-AL60_RS27115;Name=AL60_RS27115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27115 NZ_KK316849.1 Protein Homology CDS 257238 257384 . + 0 ID=cds-WP_003408267.1;Parent=gene-AL60_RS27115;Dbxref=GenBank:WP_003408267.1;Name=WP_003408267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303146.1;locus_tag=AL60_RS27115;product=hypothetical protein;protein_id=WP_003408267.1;transl_table=11 NZ_KK316849.1 RefSeq gene 257378 258112 . - . ID=gene-AL60_RS13995;Name=cmr;gbkey=Gene;gene=cmr;gene_biotype=protein_coding;locus_tag=AL60_RS13995;old_locus_tag=AL60_01702 NZ_KK316849.1 Protein Homology CDS 257378 258112 . - 0 ID=cds-WP_003898967.1;Parent=gene-AL60_RS13995;Dbxref=GenBank:WP_003898967.1;Name=WP_003898967.1;gbkey=CDS;gene=cmr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216191.1;locus_tag=AL60_RS13995;product=HTH-type transcriptional regulator Cmr;protein_id=WP_003898967.1;transl_table=11 NZ_KK316849.1 RefSeq gene 258184 258888 . + . ID=gene-AL60_RS0104605;Name=AL60_RS0104605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104605;old_locus_tag=AL60_01703 NZ_KK316849.1 Protein Homology CDS 258184 258888 . + 0 ID=cds-WP_003408270.1;Parent=gene-AL60_RS0104605;Dbxref=GenBank:WP_003408270.1;Name=WP_003408270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216192.1;locus_tag=AL60_RS0104605;product=peroxiredoxin-like family protein;protein_id=WP_003408270.1;transl_table=11 NZ_KK316849.1 RefSeq gene 258885 259433 . + . ID=gene-AL60_RS14000;Name=dsbF;gbkey=Gene;gene=dsbF;gene_biotype=protein_coding;locus_tag=AL60_RS14000;old_locus_tag=AL60_01704 NZ_KK316849.1 Protein Homology CDS 258885 259433 . + 0 ID=cds-WP_003408271.1;Parent=gene-AL60_RS14000;Dbxref=GenBank:WP_003408271.1;Name=WP_003408271.1;gbkey=CDS;gene=dsbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216193.1;locus_tag=AL60_RS14000;product=disulfide bond-forming protein DsbF;protein_id=WP_003408271.1;transl_table=11 NZ_KK316849.1 RefSeq gene 259534 260436 . + . ID=gene-AL60_RS14005;Name=AL60_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14005;old_locus_tag=AL60_01705 NZ_KK316849.1 Protein Homology CDS 259534 260436 . + 0 ID=cds-WP_003408272.1;Parent=gene-AL60_RS14005;Dbxref=GenBank:WP_003408272.1;Name=WP_003408272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216194.1;locus_tag=AL60_RS14005;product=Rv1678 family membrane protein;protein_id=WP_003408272.1;transl_table=11 NZ_KK316849.1 RefSeq gene 260436 261557 . + . ID=gene-AL60_RS14010;Name=fadE16;gbkey=Gene;gene=fadE16;gene_biotype=protein_coding;locus_tag=AL60_RS14010;old_locus_tag=AL60_01706 NZ_KK316849.1 Protein Homology CDS 260436 261557 . + 0 ID=cds-WP_003408274.1;Parent=gene-AL60_RS14010;Dbxref=GenBank:WP_003408274.1;Name=WP_003408274.1;gbkey=CDS;gene=fadE16;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216195.1;locus_tag=AL60_RS14010;product=Rv1679 family acyl-CoA dehydrogenase;protein_id=WP_003408274.1;transl_table=11 NZ_KK316849.1 RefSeq gene 261566 262390 . + . ID=gene-AL60_RS14015;Name=AL60_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14015;old_locus_tag=AL60_01707 NZ_KK316849.1 Protein Homology CDS 261566 262390 . + 0 ID=cds-WP_003898971.1;Parent=gene-AL60_RS14015;Dbxref=GenBank:WP_003898971.1;Name=WP_003898971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216196.1;locus_tag=AL60_RS14015;product=Rv1680 family SBP-like protein;protein_id=WP_003898971.1;transl_table=11 NZ_KK316849.1 RefSeq gene 262387 263379 . + . ID=gene-AL60_RS14020;Name=moeX;gbkey=Gene;gene=moeX;gene_biotype=protein_coding;locus_tag=AL60_RS14020;old_locus_tag=AL60_01708 NZ_KK316849.1 Protein Homology CDS 262387 263379 . + 0 ID=cds-WP_003408279.1;Parent=gene-AL60_RS14020;Dbxref=GenBank:WP_003408279.1;Name=WP_003408279.1;gbkey=CDS;gene=moeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216197.1;locus_tag=AL60_RS14020;product=Rv1681 family radical SAM protein;protein_id=WP_003408279.1;transl_table=11 NZ_KK316849.1 RefSeq gene 263609 264457 . + . ID=gene-AL60_RS14025;Name=AL60_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14025;old_locus_tag=AL60_01709 NZ_KK316849.1 Protein Homology CDS 263609 264457 . + 0 ID=cds-WP_003898973.1;Parent=gene-AL60_RS14025;Dbxref=GenBank:WP_003898973.1;Name=WP_003898973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898973.1;locus_tag=AL60_RS14025;product=coiled-coil domain-containing protein;protein_id=WP_003898973.1;transl_table=11 NZ_KK316849.1 RefSeq gene 264731 267730 . + . ID=gene-AL60_RS14030;Name=AL60_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14030;old_locus_tag=AL60_01710 NZ_KK316849.1 Protein Homology CDS 264731 267730 . + 0 ID=cds-WP_003408360.1;Parent=gene-AL60_RS14030;Dbxref=GenBank:WP_003408360.1;Name=WP_003408360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216199.1;locus_tag=AL60_RS14030;product=acyl-CoA synthetase;protein_id=WP_003408360.1;transl_table=11 NZ_KK316849.1 RefSeq gene 267723 267947 . + . ID=gene-AL60_RS14035;Name=AL60_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14035;old_locus_tag=AL60_01711 NZ_KK316849.1 Protein Homology CDS 267723 267947 . + 0 ID=cds-WP_003408362.1;Parent=gene-AL60_RS14035;Dbxref=GenBank:WP_003408362.1;Name=WP_003408362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216200.1;locus_tag=AL60_RS14035;product=Trm112 family protein;protein_id=WP_003408362.1;transl_table=11 NZ_KK316849.1 RefSeq gene 267913 268536 . - . ID=gene-AL60_RS14040;Name=AL60_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14040;old_locus_tag=AL60_01712 NZ_KK316849.1 Protein Homology CDS 267913 268536 . - 0 ID=cds-WP_003408366.1;Parent=gene-AL60_RS14040;Dbxref=GenBank:WP_003408366.1;Name=WP_003408366.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216201.1;locus_tag=AL60_RS14040;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003408366.1;transl_table=11 NZ_KK316849.1 RefSeq gene 268538 269287 . - . ID=gene-AL60_RS14045;Name=AL60_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14045;old_locus_tag=AL60_01713 NZ_KK316849.1 Protein Homology CDS 268538 269287 . - 0 ID=cds-WP_003912666.1;Parent=gene-AL60_RS14045;Dbxref=GenBank:WP_003912666.1;Name=WP_003912666.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912666.1;locus_tag=AL60_RS14045;product=ABC transporter permease;protein_id=WP_003912666.1;transl_table=11 NZ_KK316849.1 RefSeq gene 269290 270057 . - . ID=gene-AL60_RS14050;Name=AL60_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14050;old_locus_tag=AL60_01714 NZ_KK316849.1 Protein Homology CDS 269290 270057 . - 0 ID=cds-WP_003898975.1;Parent=gene-AL60_RS14050;Dbxref=GenBank:WP_003898975.1;Name=WP_003898975.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216203.1;locus_tag=AL60_RS14050;product=ABC transporter ATP-binding protein;protein_id=WP_003898975.1;transl_table=11 NZ_KK316849.1 RefSeq gene 270116 270727 . + . ID=gene-AL60_RS14055;Name=mpg;gbkey=Gene;gene=mpg;gene_biotype=protein_coding;locus_tag=AL60_RS14055;old_locus_tag=AL60_01715 NZ_KK316849.1 Protein Homology CDS 270116 270727 . + 0 ID=cds-WP_003408373.1;Parent=gene-AL60_RS14055;Dbxref=GenBank:WP_003408373.1;Name=WP_003408373.1;Ontology_term=GO:0006284,GO:0003905;gbkey=CDS;gene=mpg;go_function=alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216204.1;locus_tag=AL60_RS14055;product=DNA-3-methyladenine glycosylase;protein_id=WP_003408373.1;transl_table=11 NZ_KK316849.1 RefSeq gene 270739 272013 . + . ID=gene-AL60_RS14060;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=AL60_RS14060;old_locus_tag=AL60_01716 NZ_KK316849.1 Protein Homology CDS 270739 272013 . + 0 ID=cds-WP_003408375.1;Parent=gene-AL60_RS14060;Dbxref=GenBank:WP_003408375.1;Name=WP_003408375.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216205.1;locus_tag=AL60_RS14060;product=tyrosine--tRNA ligase;protein_id=WP_003408375.1;transl_table=11 NZ_KK316849.1 RefSeq gene 272664 273047 . + . ID=gene-AL60_RS14065;Name=lprJ;gbkey=Gene;gene=lprJ;gene_biotype=protein_coding;locus_tag=AL60_RS14065;old_locus_tag=AL60_01717 NZ_KK316849.1 Protein Homology CDS 272664 273047 . + 0 ID=cds-WP_003408378.1;Parent=gene-AL60_RS14065;Dbxref=GenBank:WP_003408378.1;Name=WP_003408378.1;gbkey=CDS;gene=lprJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216206.1;locus_tag=AL60_RS14065;product=lipoprotein LprJ;protein_id=WP_003408378.1;transl_table=11 NZ_KK316849.1 RefSeq gene 273086 273838 . + . ID=gene-AL60_RS14070;Name=AL60_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14070;old_locus_tag=AL60_01718 NZ_KK316849.1 Protein Homology CDS 273086 273838 . + 0 ID=cds-WP_003408379.1;Parent=gene-AL60_RS14070;Dbxref=GenBank:WP_003408379.1;Name=WP_003408379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216207.1;locus_tag=AL60_RS14070;product=tetratricopeptide repeat protein;protein_id=WP_003408379.1;transl_table=11 NZ_KK316849.1 RefSeq gene 273835 274896 . + . ID=gene-AL60_RS14075;Name=AL60_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14075;old_locus_tag=AL60_01719 NZ_KK316849.1 Protein Homology CDS 273835 274896 . + 0 ID=cds-WP_003408380.1;Parent=gene-AL60_RS14075;Dbxref=GenBank:WP_003408380.1;Name=WP_003408380.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216208.1;locus_tag=AL60_RS14075;product=HAD-IIA family hydrolase;protein_id=WP_003408380.1;transl_table=11 NZ_KK316849.1 RefSeq gene 274893 275069 . + . ID=gene-AL60_RS14080;Name=AL60_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14080;old_locus_tag=AL60_01720 NZ_KK316849.1 Protein Homology CDS 274893 275069 . + 0 ID=cds-WP_003408381.1;Parent=gene-AL60_RS14080;Dbxref=GenBank:WP_003408381.1;Name=WP_003408381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216209.1;locus_tag=AL60_RS14080;product=hypothetical protein;protein_id=WP_003408381.1;transl_table=11 NZ_KK316849.1 RefSeq gene 275077 275883 . + . ID=gene-AL60_RS14085;Name=tlyA;gbkey=Gene;gene=tlyA;gene_biotype=protein_coding;locus_tag=AL60_RS14085;old_locus_tag=AL60_01721 NZ_KK316849.1 Protein Homology CDS 275077 275883 . + 0 ID=cds-WP_003408382.1;Parent=gene-AL60_RS14085;Dbxref=GenBank:WP_003408382.1;Name=WP_003408382.1;gbkey=CDS;gene=tlyA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216210.1;locus_tag=AL60_RS14085;product=16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA;protein_id=WP_003408382.1;transl_table=11 NZ_KK316849.1 RefSeq gene 275883 276806 . + . ID=gene-AL60_RS14090;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=AL60_RS14090;old_locus_tag=AL60_01722 NZ_KK316849.1 Protein Homology CDS 275883 276806 . + 0 ID=cds-WP_003408383.1;Parent=gene-AL60_RS14090;Dbxref=GenBank:WP_003408383.1;Name=WP_003408383.1;Ontology_term=GO:0006741,GO:0019674,GO:0003951;gbkey=CDS;gene=ppnK;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA,NAD+ metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216211.1;locus_tag=AL60_RS14090;product=NAD kinase;protein_id=WP_003408383.1;transl_table=11 NZ_KK316849.1 RefSeq gene 276820 278583 . + . ID=gene-AL60_RS14095;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=AL60_RS14095;old_locus_tag=AL60_01723 NZ_KK316849.1 Protein Homology CDS 276820 278583 . + 0 ID=cds-WP_003408385.1;Parent=gene-AL60_RS14095;Dbxref=GenBank:WP_003408385.1;Name=WP_003408385.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216212.1;locus_tag=AL60_RS14095;product=DNA repair protein RecN;protein_id=WP_003408385.1;transl_table=11 NZ_KK316849.1 RefSeq gene 278679 279860 . + . ID=gene-AL60_RS14100;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=AL60_RS14100;old_locus_tag=AL60_01724 NZ_KK316849.1 Protein Homology CDS 278679 279860 . + 0 ID=cds-WP_003408387.1;Parent=gene-AL60_RS14100;Dbxref=GenBank:WP_003408387.1;Name=WP_003408387.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216213.1;locus_tag=AL60_RS14100;product=putative cytokinetic ring protein SteA;protein_id=WP_003408387.1;transl_table=11 NZ_KK316849.1 RefSeq gene 279882 280826 . + . ID=gene-AL60_RS14105;Name=mctB;gbkey=Gene;gene=mctB;gene_biotype=protein_coding;locus_tag=AL60_RS14105;old_locus_tag=AL60_01725 NZ_KK316849.1 Protein Homology CDS 279882 280826 . + 0 ID=cds-WP_003408390.1;Parent=gene-AL60_RS14105;Dbxref=GenBank:WP_003408390.1;Name=WP_003408390.1;gbkey=CDS;gene=mctB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216214.1;locus_tag=AL60_RS14105;product=copper transporter MctB;protein_id=WP_003408390.1;transl_table=11 NZ_KK316849.1 RefSeq gene 280966 282726 . + . ID=gene-AL60_RS14110;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AL60_RS14110;old_locus_tag=AL60_01726 NZ_KK316849.1 Protein Homology CDS 280966 282726 . + 0 ID=cds-WP_003408396.1;Parent=gene-AL60_RS14110;Dbxref=GenBank:WP_003408396.1;Name=WP_003408396.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216215.1;locus_tag=AL60_RS14110;product=CTP synthase;protein_id=WP_003408396.1;transl_table=11 NZ_KK316849.1 RefSeq gene 282719 283342 . + . ID=gene-AL60_RS14115;Name=AL60_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14115;old_locus_tag=AL60_01727 NZ_KK316849.1 Protein Homology CDS 282719 283342 . + 0 ID=cds-WP_003408399.1;Parent=gene-AL60_RS14115;Dbxref=GenBank:WP_003408399.1;Name=WP_003408399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216216.1;locus_tag=AL60_RS14115;product=ADP-ribose diphosphatase;protein_id=WP_003408399.1;transl_table=11 NZ_KK316849.1 RefSeq gene 283339 284274 . + . ID=gene-AL60_RS14120;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AL60_RS14120;old_locus_tag=AL60_01728 NZ_KK316849.1 Protein Homology CDS 283339 284274 . + 0 ID=cds-WP_003408401.1;Parent=gene-AL60_RS14120;Dbxref=GenBank:WP_003408401.1;Name=WP_003408401.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216217.1;locus_tag=AL60_RS14120;product=site-specific tyrosine recombinase XerD;protein_id=WP_003408401.1;transl_table=11 NZ_KK316849.1 RefSeq gene 284348 285712 . - . ID=gene-AL60_RS14125;Name=AL60_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14125;old_locus_tag=AL60_01729 NZ_KK316849.1 Protein Homology CDS 284348 285712 . - 0 ID=cds-WP_003898977.1;Parent=gene-AL60_RS14125;Dbxref=GenBank:WP_003898977.1;Name=WP_003898977.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216218.1;locus_tag=AL60_RS14125;product=HNH endonuclease signature motif containing protein;protein_id=WP_003898977.1;transl_table=11 NZ_KK316849.1 RefSeq gene 285974 286135 . - . ID=gene-AL60_RS27120;Name=AL60_RS27120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27120 NZ_KK316849.1 Protein Homology CDS 285974 286135 . - 0 ID=cds-WP_009939761.1;Parent=gene-AL60_RS27120;Dbxref=GenBank:WP_009939761.1;Name=WP_009939761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939761.1;locus_tag=AL60_RS27120;product=hypothetical protein;protein_id=WP_009939761.1;transl_table=11 NZ_KK316849.1 RefSeq gene 286268 287017 . - . ID=gene-AL60_RS14130;Name=AL60_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14130;old_locus_tag=AL60_01730 NZ_KK316849.1 Protein Homology CDS 286268 287017 . - 0 ID=cds-WP_014848103.1;Parent=gene-AL60_RS14130;Dbxref=GenBank:WP_014848103.1;Name=WP_014848103.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216219.4;locus_tag=AL60_RS14130;product=O-methyltransferase;protein_id=WP_014848103.1;transl_table=11 NZ_KK316849.1 RefSeq gene 286923 288593 . - . ID=gene-AL60_RS14135;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;locus_tag=AL60_RS14135;old_locus_tag=AL60_01731 NZ_KK316849.1 Protein Homology CDS 286923 288593 . - 0 ID=cds-WP_003408413.1;Parent=gene-AL60_RS14135;Dbxref=GenBank:WP_003408413.1;Name=WP_003408413.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216220.1;locus_tag=AL60_RS14135;product=amino acid permease;protein_id=WP_003408413.1;transl_table=11 NZ_KK316849.1 RefSeq gene 288634 289791 . - . ID=gene-AL60_RS14140;Name=AL60_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14140;old_locus_tag=AL60_01732 NZ_KK316849.1 Protein Homology CDS 288634 289791 . - 0 ID=cds-WP_003898979.1;Parent=gene-AL60_RS14140;Dbxref=GenBank:WP_003898979.1;Name=WP_003898979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177827.1;locus_tag=AL60_RS14140;product=PPE family protein;protein_id=WP_003898979.1;transl_table=11 NZ_KK316849.1 RefSeq gene 289831 290865 . - . ID=gene-AL60_RS14145;Name=AL60_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14145;old_locus_tag=AL60_01733 NZ_KK316849.1 Protein Homology CDS 289831 290865 . - 0 ID=cds-WP_003918302.1;Parent=gene-AL60_RS14145;Dbxref=GenBank:WP_003918302.1;Name=WP_003918302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177833.1;locus_tag=AL60_RS14145;product=PPE family protein;protein_id=WP_003918302.1;transl_table=11 NZ_KK316849.1 RefSeq gene 291619 291786 . - . ID=gene-AL60_RS14150;Name=AL60_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14150;old_locus_tag=AL60_01734 NZ_KK316849.1 Protein Homology CDS 291619 291786 . - 0 ID=cds-WP_003408420.1;Parent=gene-AL60_RS14150;Dbxref=GenBank:WP_003408420.1;Name=WP_003408420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177651.1;locus_tag=AL60_RS14150;product=hypothetical protein;protein_id=WP_003408420.1;transl_table=11 NZ_KK316849.1 RefSeq gene 292019 293479 . + . ID=gene-AL60_RS14155;Name=AL60_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14155;old_locus_tag=AL60_01735 NZ_KK316849.1 Protein Homology CDS 292019 293479 . + 0 ID=cds-WP_003898981.1;Parent=gene-AL60_RS14155;Dbxref=GenBank:WP_003898981.1;Name=WP_003898981.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216223.1;locus_tag=AL60_RS14155;product=SulP family inorganic anion transporter;protein_id=WP_003898981.1;transl_table=11 NZ_KK316849.1 RefSeq gene 293590 294453 . + . ID=gene-AL60_RS14160;Name=AL60_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14160;old_locus_tag=AL60_01736 NZ_KK316849.1 Protein Homology CDS 293590 294453 . + 0 ID=cds-WP_003911586.1;Parent=gene-AL60_RS14160;Dbxref=GenBank:WP_003911586.1;Name=WP_003911586.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911586.1;locus_tag=AL60_RS14160;product=ParA family protein;protein_id=WP_003911586.1;transl_table=11 NZ_KK316849.1 RefSeq gene 294450 295286 . + . ID=gene-AL60_RS14165;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=AL60_RS14165;old_locus_tag=AL60_01737 NZ_KK316849.1 Protein Homology CDS 294450 295286 . + 0 ID=cds-WP_003408432.1;Parent=gene-AL60_RS14165;Dbxref=GenBank:WP_003408432.1;Name=WP_003408432.1;gbkey=CDS;gene=scpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216225.1;locus_tag=AL60_RS14165;product=segregation/condensation protein A;protein_id=WP_003408432.1;transl_table=11 NZ_KK316849.1 RefSeq gene 295283 295978 . + . ID=gene-AL60_RS14170;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=AL60_RS14170;old_locus_tag=AL60_01738 NZ_KK316849.1 Protein Homology CDS 295283 295978 . + 0 ID=cds-WP_003408436.1;Parent=gene-AL60_RS14170;Dbxref=GenBank:WP_003408436.1;Name=WP_003408436.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216226.1;locus_tag=AL60_RS14170;product=SMC-Scp complex subunit ScpB;protein_id=WP_003408436.1;transl_table=11 NZ_KK316849.1 RefSeq gene 295975 296739 . + . ID=gene-AL60_RS14175;Name=AL60_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14175;old_locus_tag=AL60_01739 NZ_KK316849.1 Protein Homology CDS 295975 296739 . + 0 ID=cds-WP_003408439.1;Parent=gene-AL60_RS14175;Dbxref=GenBank:WP_003408439.1;Name=WP_003408439.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216227.1;locus_tag=AL60_RS14175;product=pseudouridine synthase;protein_id=WP_003408439.1;transl_table=11 NZ_KK316849.1 RefSeq gene 296736 297428 . + . ID=gene-AL60_RS14180;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AL60_RS14180;old_locus_tag=AL60_01740 NZ_KK316849.1 Protein Homology CDS 296736 297428 . + 0 ID=cds-WP_003408441.1;Parent=gene-AL60_RS14180;Dbxref=GenBank:WP_003408441.1;Name=WP_003408441.1;Ontology_term=GO:0015949,GO:0005524;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216228.1;locus_tag=AL60_RS14180;product=(d)CMP kinase;protein_id=WP_003408441.1;transl_table=11 NZ_KK316849.1 RefSeq gene 297425 298816 . + . ID=gene-AL60_RS14185;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=AL60_RS14185;old_locus_tag=AL60_01741 NZ_KK316849.1 Protein Homology CDS 297425 298816 . + 0 ID=cds-WP_003898984.1;Parent=gene-AL60_RS14185;Dbxref=GenBank:WP_003898984.1;Name=WP_003898984.1;Ontology_term=GO:0005525;gbkey=CDS;gene=der;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216229.1;locus_tag=AL60_RS14185;product=ribosome biogenesis GTPase Der;protein_id=WP_003898984.1;transl_table=11 NZ_KK316849.1 RefSeq gene 298990 299802 . + . ID=gene-AL60_RS14190;Name=AL60_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14190;old_locus_tag=AL60_01742 NZ_KK316849.1 Protein Homology CDS 298990 299802 . + 0 ID=cds-WP_003408444.1;Parent=gene-AL60_RS14190;Dbxref=GenBank:WP_003408444.1;Name=WP_003408444.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216230.1;locus_tag=AL60_RS14190;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003408444.1;transl_table=11 NZ_KK316849.1 RefSeq gene 299796 300710 . + . ID=gene-AL60_RS14195;Name=AL60_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14195;old_locus_tag=AL60_01743 NZ_KK316849.1 Protein Homology CDS 299796 300710 . + 0 ID=cds-WP_003898985.1;Parent=gene-AL60_RS14195;Dbxref=GenBank:WP_003898985.1;Name=WP_003898985.1;Ontology_term=GO:0006635,GO:0003857,GO:0070403;gbkey=CDS;go_function=3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177829.1;locus_tag=AL60_RS14195;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=WP_003898985.1;transl_table=11 NZ_KK316849.1 RefSeq gene 300713 301543 . + . ID=gene-AL60_RS14200;Name=AL60_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14200;old_locus_tag=AL60_01744 NZ_KK316849.1 Protein Homology CDS 300713 301543 . + 0 ID=cds-WP_003906661.1;Parent=gene-AL60_RS14200;Dbxref=GenBank:WP_003906661.1;Name=WP_003906661.1;Ontology_term=GO:0016812,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003907750.1;locus_tag=AL60_RS14200;product=cyclase family protein;protein_id=WP_003906661.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 301543 301892 . + . ID=gene-AL60_RS14205;Name=AL60_RS14205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS14205;old_locus_tag=AL60_01745;pseudo=true NZ_KK316849.1 Protein Homology CDS 301543 301892 . + 0 ID=cds-AL60_RS14205;Parent=gene-AL60_RS14205;Note=frameshifted;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216233.1;locus_tag=AL60_RS14205;product=beta-D-galactosidase;pseudo=true;transl_table=11 NZ_KK316849.1 RefSeq gene 301945 302763 . + . ID=gene-AL60_RS14210;Name=AL60_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14210;old_locus_tag=AL60_01746 NZ_KK316849.1 Protein Homology CDS 301945 302763 . + 0 ID=cds-WP_003408456.1;Parent=gene-AL60_RS14210;Dbxref=GenBank:WP_003408456.1;Name=WP_003408456.1;Ontology_term=GO:0019475,GO:0043720,GO:0046872;gbkey=CDS;go_function=3-keto-5-aminohexanoate cleavage activity|0043720||IEA,metal ion binding|0046872||IEA;go_process=L-lysine catabolic process to acetate|0019475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216234.1;locus_tag=AL60_RS14210;product=beta-keto acid cleavage family enzyme;protein_id=WP_003408456.1;transl_table=11 NZ_KK316849.1 RefSeq gene 302777 303556 . + . ID=gene-AL60_RS14215;Name=AL60_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14215;old_locus_tag=AL60_01747 NZ_KK316849.1 Protein Homology CDS 302777 303556 . + 0 ID=cds-WP_003408460.1;Parent=gene-AL60_RS14215;Dbxref=GenBank:WP_003408460.1;Name=WP_003408460.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216235.1;locus_tag=AL60_RS14215;product=IclR family transcriptional regulator;protein_id=WP_003408460.1;transl_table=11 NZ_KK316849.1 RefSeq gene 303749 303822 . + . ID=gene-AL60_RS14220;Name=AL60_RS14220;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS14220;old_locus_tag=AL60_01748 NZ_KK316849.1 tRNAscan-SE tRNA 303749 303822 . + . ID=rna-AL60_RS14220;Parent=gene-AL60_RS14220;anticodon=(pos:303783..303785);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS14220;product=tRNA-Pro NZ_KK316849.1 tRNAscan-SE exon 303749 303822 . + . ID=exon-AL60_RS14220-1;Parent=rna-AL60_RS14220;anticodon=(pos:303783..303785);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS14220;product=tRNA-Pro NZ_KK316849.1 RefSeq gene 304166 304555 . - . ID=gene-AL60_RS14225;Name=AL60_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14225;old_locus_tag=AL60_01749 NZ_KK316849.1 Protein Homology CDS 304166 304555 . - 0 ID=cds-WP_003408465.1;Parent=gene-AL60_RS14225;Dbxref=GenBank:WP_003408465.1;Name=WP_003408465.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216236.1;locus_tag=AL60_RS14225;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003408465.1;transl_table=11 NZ_KK316849.1 RefSeq gene 304552 304779 . - . ID=gene-AL60_RS14230;Name=AL60_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14230;old_locus_tag=AL60_01750 NZ_KK316849.1 Protein Homology CDS 304552 304779 . - 0 ID=cds-WP_003408469.1;Parent=gene-AL60_RS14230;Dbxref=GenBank:WP_003408469.1;Name=WP_003408469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216237.2;locus_tag=AL60_RS14230;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_003408469.1;transl_table=11 NZ_KK316849.1 RefSeq gene 304997 306481 . + . ID=gene-AL60_RS14235;Name=AL60_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14235;old_locus_tag=AL60_01751 NZ_KK316849.1 Protein Homology CDS 304997 306481 . + 0 ID=cds-WP_009937637.1;Parent=gene-AL60_RS14235;Dbxref=GenBank:WP_009937637.1;Name=WP_009937637.1;Ontology_term=GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216238.1;locus_tag=AL60_RS14235;product=biotin carboxylase;protein_id=WP_009937637.1;transl_table=11 NZ_KK316849.1 RefSeq gene 306478 307725 . + . ID=gene-AL60_RS14240;Name=AL60_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14240;old_locus_tag=AL60_01752 NZ_KK316849.1 Protein Homology CDS 306478 307725 . + 0 ID=cds-WP_003408476.1;Parent=gene-AL60_RS14240;Dbxref=GenBank:WP_003408476.1;Name=WP_003408476.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216239.1;locus_tag=AL60_RS14240;product=serine hydrolase domain-containing protein;protein_id=WP_003408476.1;transl_table=11 NZ_KK316849.1 RefSeq gene 307768 308187 . - . ID=gene-AL60_RS14245;Name=AL60_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14245;old_locus_tag=AL60_01753 NZ_KK316849.1 Protein Homology CDS 307768 308187 . - 0 ID=cds-WP_003408483.1;Parent=gene-AL60_RS14245;Dbxref=GenBank:WP_003408483.1;Name=WP_003408483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216240.1;locus_tag=AL60_RS14245;product=hypothetical protein;protein_id=WP_003408483.1;transl_table=11 NZ_KK316849.1 RefSeq gene 308177 308887 . - . ID=gene-AL60_RS14250;Name=AL60_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14250;old_locus_tag=AL60_01754 NZ_KK316849.1 Protein Homology CDS 308177 308887 . - 0 ID=cds-WP_003408486.1;Parent=gene-AL60_RS14250;Dbxref=GenBank:WP_003408486.1;Name=WP_003408486.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216241.1;locus_tag=AL60_RS14250;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_003408486.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 308988 310372 . + . ID=gene-AL60_RS0104630;Name=AL60_RS0104630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0104630;old_locus_tag=AL60_01755;pseudo=true NZ_KK316849.1 Protein Homology CDS 308988 310372 . + 0 ID=cds-AL60_RS0104630;Parent=gene-AL60_RS0104630;Note=frameshifted;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216242.1;locus_tag=AL60_RS0104630;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11 NZ_KK316849.1 RefSeq gene 310405 310974 . + . ID=gene-AL60_RS14255;Name=AL60_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14255;old_locus_tag=AL60_01756 NZ_KK316849.1 Protein Homology CDS 310405 310974 . + 0 ID=cds-WP_003408493.1;Parent=gene-AL60_RS14255;Dbxref=GenBank:WP_003408493.1;Name=WP_003408493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216243.1;locus_tag=AL60_RS14255;product=TIGR03086 family metal-binding protein;protein_id=WP_003408493.1;transl_table=11 NZ_KK316849.1 RefSeq gene 310999 311769 . - . ID=gene-AL60_RS14260;Name=AL60_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14260;old_locus_tag=AL60_01757 NZ_KK316849.1 Protein Homology CDS 310999 311769 . - 0 ID=cds-WP_003408495.1;Parent=gene-AL60_RS14260;Dbxref=GenBank:WP_003408495.1;Name=WP_003408495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216244.1;locus_tag=AL60_RS14260;product=VldE C-terminal domain-containing protein;protein_id=WP_003408495.1;transl_table=11 NZ_KK316849.1 RefSeq gene 311766 312704 . - . ID=gene-AL60_RS14265;Name=AL60_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14265;old_locus_tag=AL60_01758 NZ_KK316849.1 Protein Homology CDS 311766 312704 . - 0 ID=cds-WP_003408497.1;Parent=gene-AL60_RS14265;Dbxref=GenBank:WP_003408497.1;Name=WP_003408497.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216245.1;locus_tag=AL60_RS14265;product=class I SAM-dependent methyltransferase;protein_id=WP_003408497.1;transl_table=11 NZ_KK316849.1 RefSeq gene 312827 314380 . - . ID=gene-AL60_RS14270;Name=AL60_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14270;old_locus_tag=AL60_01759 NZ_KK316849.1 Protein Homology CDS 312827 314380 . - 0 ID=cds-WP_003408499.1;Parent=gene-AL60_RS14270;Dbxref=GenBank:WP_003408499.1;Name=WP_003408499.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216246.1;locus_tag=AL60_RS14270;product=serine hydrolase domain-containing protein;protein_id=WP_003408499.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 314530 314659 . + . ID=gene-AL60_RS28140;Name=AL60_RS28140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28140;partial=true;pseudo=true;start_range=.,314530 NZ_KK316849.1 Protein Homology CDS 314530 314659 . + 0 ID=cds-AL60_RS28140;Parent=gene-AL60_RS28140;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178014.1;locus_tag=AL60_RS28140;partial=true;product=galactofuranosyl transferase;pseudo=true;start_range=.,314530;transl_table=11 NZ_KK316849.1 RefSeq gene 314812 316368 . + . ID=gene-AL60_RS14275;Name=AL60_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14275;old_locus_tag=AL60_01760 NZ_KK316849.1 Protein Homology CDS 314812 316368 . + 0 ID=cds-WP_003898989.1;Parent=gene-AL60_RS14275;Dbxref=GenBank:WP_003898989.1;Name=WP_003898989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214748.2;locus_tag=AL60_RS14275;product=succinic semialdehyde dehydrogenase;protein_id=WP_003898989.1;transl_table=11 NZ_KK316849.1 RefSeq gene 316378 316926 . - . ID=gene-AL60_RS14280;Name=AL60_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14280;old_locus_tag=AL60_01761 NZ_KK316849.1 Protein Homology CDS 316378 316926 . - 0 ID=cds-WP_003408503.1;Parent=gene-AL60_RS14280;Dbxref=GenBank:WP_003408503.1;Name=WP_003408503.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216248.1;locus_tag=AL60_RS14280;product=thioredoxin family protein;protein_id=WP_003408503.1;transl_table=11 NZ_KK316849.1 RefSeq gene 316990 317622 . - . ID=gene-AL60_RS14285;Name=AL60_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14285;old_locus_tag=AL60_01762 NZ_KK316849.1 Protein Homology CDS 316990 317622 . - 0 ID=cds-WP_003408506.1;Parent=gene-AL60_RS14285;Dbxref=GenBank:WP_003408506.1;Name=WP_003408506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216249.1;locus_tag=AL60_RS14285;product=Rv1733c family protein;protein_id=WP_003408506.1;transl_table=11 NZ_KK316849.1 RefSeq gene 317909 318151 . - . ID=gene-AL60_RS14290;Name=AL60_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14290;old_locus_tag=AL60_01763 NZ_KK316849.1 Protein Homology CDS 317909 318151 . - 0 ID=cds-WP_003408509.1;Parent=gene-AL60_RS14290;Dbxref=GenBank:WP_003408509.1;Name=WP_003408509.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014000907.1;locus_tag=AL60_RS14290;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_003408509.1;transl_table=11 NZ_KK316849.1 RefSeq gene 318426 319019 . - . ID=gene-AL60_RS14295;Name=AL60_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14295;old_locus_tag=AL60_01764 NZ_KK316849.1 Protein Homology CDS 318426 319019 . - 0 ID=cds-WP_003898991.1;Parent=gene-AL60_RS14295;Dbxref=GenBank:WP_003898991.1;Name=WP_003898991.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015552.6;locus_tag=AL60_RS14295;product=tellurite resistance/C4-dicarboxylate transporter family protein;protein_id=WP_003898991.1;transl_table=11 NZ_KK316849.1 RefSeq gene 319022 319264 . - . ID=gene-AL60_RS14300;Name=AL60_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14300;old_locus_tag=AL60_01765 NZ_KK316849.1 Protein Homology CDS 319022 319264 . - 0 ID=cds-WP_003408513.1;Parent=gene-AL60_RS14300;Dbxref=GenBank:WP_003408513.1;Name=WP_003408513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030033.1;locus_tag=AL60_RS14300;product=hypothetical protein;protein_id=WP_003408513.1;transl_table=11 NZ_KK316849.1 RefSeq gene 319363 321321 . - . ID=gene-AL60_RS25895;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AL60_RS25895;old_locus_tag=AL60_01766 NZ_KK316849.1 Protein Homology CDS 319363 321321 . - 0 ID=cds-WP_003901238.1;Parent=gene-AL60_RS25895;Dbxref=GenBank:WP_003901238.1;Name=WP_003901238.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216252.1;locus_tag=AL60_RS25895;product=respiratory nitrate reductase subunit gamma;protein_id=WP_003901238.1;transl_table=11 NZ_KK316849.1 RefSeq gene 321318 322505 . - . ID=gene-AL60_RS14305;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=AL60_RS14305;old_locus_tag=AL60_01767 NZ_KK316849.1 Protein Homology CDS 321318 322505 . - 0 ID=cds-WP_003898992.1;Parent=gene-AL60_RS14305;Dbxref=GenBank:WP_003898992.1;Name=WP_003898992.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216253.1;locus_tag=AL60_RS14305;product=nitrate transporter NarK;protein_id=WP_003898992.1;transl_table=11 NZ_KK316849.1 RefSeq gene 322792 323076 . + . ID=gene-AL60_RS14310;Name=AL60_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14310;old_locus_tag=AL60_01768 NZ_KK316849.1 Protein Homology CDS 322792 323076 . + 0 ID=cds-WP_003408522.1;Parent=gene-AL60_RS14310;Dbxref=GenBank:WP_003408522.1;Name=WP_003408522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216254.1;locus_tag=AL60_RS14310;product=DUF1876 domain-containing protein;protein_id=WP_003408522.1;transl_table=11 NZ_KK316849.1 RefSeq gene 323090 324772 . - . ID=gene-AL60_RS14315;Name=AL60_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14315;old_locus_tag=AL60_01769 NZ_KK316849.1 Protein Homology CDS 323090 324772 . - 0 ID=cds-WP_003898994.1;Parent=gene-AL60_RS14315;Dbxref=GenBank:WP_003898994.1;Name=WP_003898994.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216255.1;locus_tag=AL60_RS14315;product=SulP family inorganic anion transporter;protein_id=WP_003898994.1;transl_table=11 NZ_KK316849.1 RefSeq gene 324840 325052 . + . ID=gene-AL60_RS14320;Name=AL60_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14320;old_locus_tag=AL60_01770 NZ_KK316849.1 Protein Homology CDS 324840 325052 . + 0 ID=cds-WP_003408528.1;Parent=gene-AL60_RS14320;Dbxref=GenBank:WP_003408528.1;Name=WP_003408528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216256.1;locus_tag=AL60_RS14320;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003408528.1;transl_table=11 NZ_KK316849.1 RefSeq gene 325052 325300 . + . ID=gene-AL60_RS14325;Name=AL60_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14325;old_locus_tag=AL60_01771 NZ_KK316849.1 Protein Homology CDS 325052 325300 . + 0 ID=cds-WP_003898996.1;Parent=gene-AL60_RS14325;Dbxref=GenBank:WP_003898996.1;Name=WP_003898996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216257.1;locus_tag=AL60_RS14325;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003898996.1;transl_table=11 NZ_KK316849.1 RefSeq gene 325308 326045 . + . ID=gene-AL60_RS14330;Name=AL60_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14330;old_locus_tag=AL60_01772 NZ_KK316849.1 Protein Homology CDS 325308 326045 . + 0 ID=cds-WP_003898997.1;Parent=gene-AL60_RS14330;Dbxref=GenBank:WP_003898997.1;Name=WP_003898997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216258.1;locus_tag=AL60_RS14330;product=hypothetical protein;protein_id=WP_003898997.1;transl_table=11 NZ_KK316849.1 RefSeq gene 326139 327839 . + . ID=gene-AL60_RS14335;Name=pknE;gbkey=Gene;gene=pknE;gene_biotype=protein_coding;locus_tag=AL60_RS14335;old_locus_tag=AL60_01773 NZ_KK316849.1 Protein Homology CDS 326139 327839 . + 0 ID=cds-WP_003898998.1;Parent=gene-AL60_RS14335;Dbxref=GenBank:WP_003898998.1;Name=WP_003898998.1;gbkey=CDS;gene=pknE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216259.1;locus_tag=AL60_RS14335;product=serine/threonine protein kinase PknE;protein_id=WP_003898998.1;transl_table=11 NZ_KK316849.1 RefSeq gene 328124 328525 . - . ID=gene-AL60_RS14340;Name=AL60_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14340;old_locus_tag=AL60_01774 NZ_KK316849.1 Protein Homology CDS 328124 328525 . - 0 ID=cds-WP_003408538.1;Parent=gene-AL60_RS14340;Dbxref=GenBank:WP_003408538.1;Name=WP_003408538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216260.1;locus_tag=AL60_RS14340;product=hypothetical protein;protein_id=WP_003408538.1;transl_table=11 NZ_KK316849.1 RefSeq gene 328515 329126 . - . ID=gene-AL60_RS14345;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=AL60_RS14345;old_locus_tag=AL60_01775 NZ_KK316849.1 Protein Homology CDS 328515 329126 . - 0 ID=cds-WP_003898999.1;Parent=gene-AL60_RS14345;Dbxref=GenBank:WP_003898999.1;Name=WP_003898999.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216261.1;locus_tag=AL60_RS14345;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_003898999.1;transl_table=11 NZ_KK316849.1 RefSeq gene 329273 330703 . + . ID=gene-AL60_RS14350;Name=pknF;gbkey=Gene;gene=pknF;gene_biotype=protein_coding;locus_tag=AL60_RS14350;old_locus_tag=AL60_01776 NZ_KK316849.1 Protein Homology CDS 329273 330703 . + 0 ID=cds-WP_003899000.1;Parent=gene-AL60_RS14350;Dbxref=GenBank:WP_003899000.1;Name=WP_003899000.1;gbkey=CDS;gene=pknF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216262.1;locus_tag=AL60_RS14350;product=serine/threonine protein kinase PknF;protein_id=WP_003899000.1;transl_table=11 NZ_KK316849.1 RefSeq gene 330765 333362 . + . ID=gene-AL60_RS14355;Name=AL60_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14355;old_locus_tag=AL60_01777 NZ_KK316849.1 Protein Homology CDS 330765 333362 . + 0 ID=cds-WP_003408545.1;Parent=gene-AL60_RS14355;Dbxref=GenBank:WP_003408545.1;Name=WP_003408545.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216263.1;locus_tag=AL60_RS14355;product=ATP transporter ATP-binding protein/permease;protein_id=WP_003408545.1;transl_table=11 NZ_KK316849.1 RefSeq gene 333795 334466 . + . ID=gene-AL60_RS14360;Name=AL60_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14360;old_locus_tag=AL60_01778 NZ_KK316849.1 Protein Homology CDS 333795 334466 . + 0 ID=cds-WP_003899001.1;Parent=gene-AL60_RS14360;Dbxref=GenBank:WP_003899001.1;Name=WP_003899001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303192.1;locus_tag=AL60_RS14360;product=hypothetical protein;protein_id=WP_003899001.1;transl_table=11 NZ_KK316849.1 RefSeq gene 334463 335020 . - . ID=gene-AL60_RS14365;Name=AL60_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14365;old_locus_tag=AL60_01779 NZ_KK316849.1 Protein Homology CDS 334463 335020 . - 0 ID=cds-WP_003408556.1;Parent=gene-AL60_RS14365;Dbxref=GenBank:WP_003408556.1;Name=WP_003408556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216265.1;locus_tag=AL60_RS14365;product=DUF6790 family protein;protein_id=WP_003408556.1;transl_table=11 NZ_KK316849.1 RefSeq gene 335104 336702 . - . ID=gene-AL60_RS14370;Name=fadD1;gbkey=Gene;gene=fadD1;gene_biotype=protein_coding;locus_tag=AL60_RS14370;old_locus_tag=AL60_01780 NZ_KK316849.1 Protein Homology CDS 335104 336702 . - 0 ID=cds-WP_003408558.1;Parent=gene-AL60_RS14370;Dbxref=GenBank:WP_003408558.1;Name=WP_003408558.1;gbkey=CDS;gene=fadD1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216266.1;locus_tag=AL60_RS14370;product=fatty-acid--CoA ligase FadD1;protein_id=WP_003408558.1;transl_table=11 NZ_KK316849.1 RefSeq gene 336900 338138 . + . ID=gene-AL60_RS14375;Name=AL60_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14375;old_locus_tag=AL60_01781 NZ_KK316849.1 Protein Homology CDS 336900 338138 . + 0 ID=cds-WP_003911631.1;Parent=gene-AL60_RS14375;Dbxref=GenBank:WP_003911631.1;Name=WP_003911631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911631.1;locus_tag=AL60_RS14375;product=FAD-dependent oxidoreductase;protein_id=WP_003911631.1;transl_table=11 NZ_KK316849.1 RefSeq pseudogene 338247 338682 . + . ID=gene-AL60_RS14380;Name=AL60_RS14380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS14380;old_locus_tag=AL60_01782;partial=true;pseudo=true;start_range=.,338247 NZ_KK316849.1 Protein Homology CDS 338247 338682 . + 0 ID=cds-AL60_RS14380;Parent=gene-AL60_RS14380;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355438.1;locus_tag=AL60_RS14380;partial=true;product=Gfo/Idh/MocA family protein;pseudo=true;start_range=.,338247;transl_table=11 NZ_KK316849.1 RefSeq gene 338749 341676 . - . ID=gene-AL60_RS14385;Name=AL60_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14385;old_locus_tag=AL60_01783 NZ_KK316849.1 Protein Homology CDS 338749 341676 . - 0 ID=cds-WP_009938414.1;Parent=gene-AL60_RS14385;Dbxref=GenBank:WP_009938414.1;Name=WP_009938414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177830.1;locus_tag=AL60_RS14385;product=PPE family protein;protein_id=WP_009938414.1;transl_table=11 NZ_KK316849.1 RefSeq gene 341880 343391 . - . ID=gene-AL60_RS14390;Name=AL60_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14390;old_locus_tag=AL60_01784 NZ_KK316849.1 Protein Homology CDS 341880 343391 . - 0 ID=cds-WP_003906670.1;Parent=gene-AL60_RS14390;Dbxref=GenBank:WP_003906670.1;Name=WP_003906670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003906670.1;locus_tag=AL60_RS14390;product=DUF4185 domain-containing protein;protein_id=WP_003906670.1;transl_table=11 ##sequence-region NZ_KK316850.1 1 336273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316850.1 RefSeq region 1 336273 . + . ID=NZ_KK316850.1:1..336273;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316850.1 RefSeq gene 1 1524 . + . ID=gene-AL60_RS14395;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AL60_RS14395;old_locus_tag=AL60_01785;partial=true;start_range=.,1 NZ_KK316850.1 Protein Homology CDS 1 1524 . + 0 ID=cds-WP_374487265.1;Parent=gene-AL60_RS14395;Dbxref=GenBank:WP_374487265.1;Name=WP_374487265.1;Ontology_term=GO:0006275,GO:0003688,GO:0005524,GO:0043565;gbkey=CDS;gene=dnaA;go_function=DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214515.1;locus_tag=AL60_RS14395;partial=true;product=chromosomal replication initiator protein DnaA;protein_id=WP_374487265.1;start_range=.,1;transl_table=11 NZ_KK316850.1 RefSeq gene 2052 3260 . + . ID=gene-AL60_RS14400;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AL60_RS14400;old_locus_tag=AL60_01786 NZ_KK316850.1 Protein Homology CDS 2052 3260 . + 0 ID=cds-WP_003400271.1;Parent=gene-AL60_RS14400;Dbxref=GenBank:WP_003400271.1;Name=WP_003400271.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214516.1;locus_tag=AL60_RS14400;product=DNA polymerase III subunit beta;protein_id=WP_003400271.1;transl_table=11 NZ_KK316850.1 RefSeq gene 3280 4437 . + . ID=gene-AL60_RS14405;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AL60_RS14405;old_locus_tag=AL60_01787 NZ_KK316850.1 Protein Homology CDS 3280 4437 . + 0 ID=cds-WP_003899768.1;Parent=gene-AL60_RS14405;Dbxref=GenBank:WP_003899768.1;Name=WP_003899768.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214517.1;locus_tag=AL60_RS14405;product=DNA replication/repair protein RecF;protein_id=WP_003899768.1;transl_table=11 NZ_KK316850.1 RefSeq gene 4434 4997 . + . ID=gene-AL60_RS14410;Name=AL60_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14410;old_locus_tag=AL60_01788 NZ_KK316850.1 Protein Homology CDS 4434 4997 . + 0 ID=cds-WP_003899769.1;Parent=gene-AL60_RS14410;Dbxref=GenBank:WP_003899769.1;Name=WP_003899769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214518.1;locus_tag=AL60_RS14410;product=DNA replication protein DciA;protein_id=WP_003899769.1;transl_table=11 NZ_KK316850.1 RefSeq gene 5240 7267 . + . ID=gene-AL60_RS14415;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AL60_RS14415;old_locus_tag=AL60_01789 NZ_KK316850.1 Protein Homology CDS 5240 7267 . + 0 ID=cds-WP_031685236.1;Parent=gene-AL60_RS14415;Dbxref=GenBank:WP_031685236.1;Name=WP_031685236.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214519.2;locus_tag=AL60_RS14415;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_031685236.1;transl_table=11 NZ_KK316850.1 RefSeq gene 7302 9818 . + . ID=gene-AL60_RS14420;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AL60_RS14420;old_locus_tag=AL60_01790 NZ_KK316850.1 Protein Homology CDS 7302 9818 . + 0 ID=cds-WP_003400286.1;Parent=gene-AL60_RS14420;Dbxref=GenBank:WP_003400286.1;Name=WP_003400286.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214520.1;locus_tag=AL60_RS14420;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_003400286.1;transl_table=11 NZ_KK316850.1 RefSeq gene 9914 10828 . + . ID=gene-AL60_RS14425;Name=AL60_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14425;old_locus_tag=AL60_01791 NZ_KK316850.1 Protein Homology CDS 9914 10828 . + 0 ID=cds-WP_003400291.1;Parent=gene-AL60_RS14425;Dbxref=GenBank:WP_003400291.1;Name=WP_003400291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214521.1;locus_tag=AL60_RS14425;product=DUF3566 domain-containing protein;protein_id=WP_003400291.1;transl_table=11 NZ_KK316850.1 RefSeq gene 10887 10960 . + . ID=gene-AL60_RS14430;Name=AL60_RS14430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS14430;old_locus_tag=AL60_01792 NZ_KK316850.1 tRNAscan-SE tRNA 10887 10960 . + . ID=rna-AL60_RS14430;Parent=gene-AL60_RS14430;anticodon=(pos:10921..10923);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS14430;product=tRNA-Ile NZ_KK316850.1 tRNAscan-SE exon 10887 10960 . + . ID=exon-AL60_RS14430-1;Parent=rna-AL60_RS14430;anticodon=(pos:10921..10923);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS14430;product=tRNA-Ile NZ_KK316850.1 RefSeq gene 11112 11184 . + . ID=gene-AL60_RS14435;Name=AL60_RS14435;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS14435;old_locus_tag=AL60_01793 NZ_KK316850.1 tRNAscan-SE tRNA 11112 11184 . + . ID=rna-AL60_RS14435;Parent=gene-AL60_RS14435;anticodon=(pos:11145..11147);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS14435;product=tRNA-Ala NZ_KK316850.1 tRNAscan-SE exon 11112 11184 . + . ID=exon-AL60_RS14435-1;Parent=rna-AL60_RS14435;anticodon=(pos:11145..11147);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS14435;product=tRNA-Ala NZ_KK316850.1 RefSeq gene 11225 11416 . + . ID=gene-AL60_RS0104660;Name=AL60_RS0104660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104660 NZ_KK316850.1 Protein Homology CDS 11225 11416 . + 0 ID=cds-WP_003400294.1;Parent=gene-AL60_RS0104660;Dbxref=GenBank:WP_003400294.1;Name=WP_003400294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400294.1;locus_tag=AL60_RS0104660;product=hypothetical protein;protein_id=WP_003400294.1;transl_table=11 NZ_KK316850.1 RefSeq gene 11555 11692 . - . ID=gene-AL60_RS27125;Name=AL60_RS27125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27125 NZ_KK316850.1 GeneMarkS-2+ CDS 11555 11692 . - 0 ID=cds-WP_003400297.1;Parent=gene-AL60_RS27125;Dbxref=GenBank:WP_003400297.1;Name=WP_003400297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS27125;product=hypothetical protein;protein_id=WP_003400297.1;transl_table=11 NZ_KK316850.1 RefSeq gene 11874 12311 . - . ID=gene-AL60_RS14440;Name=cwsA;gbkey=Gene;gene=cwsA;gene_biotype=protein_coding;locus_tag=AL60_RS14440;old_locus_tag=AL60_01794 NZ_KK316850.1 Protein Homology CDS 11874 12311 . - 0 ID=cds-WP_003400307.1;Parent=gene-AL60_RS14440;Dbxref=GenBank:WP_003400307.1;Name=WP_003400307.1;gbkey=CDS;gene=cwsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400307.1;locus_tag=AL60_RS14440;product=cell wall synthesis protein CwsA;protein_id=WP_003400307.1;transl_table=11 NZ_KK316850.1 RefSeq gene 12468 13016 . + . ID=gene-AL60_RS14445;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;locus_tag=AL60_RS14445;old_locus_tag=AL60_01795 NZ_KK316850.1 Protein Homology CDS 12468 13016 . + 0 ID=cds-WP_003400321.1;Parent=gene-AL60_RS14445;Dbxref=GenBank:WP_003400321.1;Name=WP_003400321.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400321.1;locus_tag=AL60_RS14445;product=peptidylprolyl isomerase PpiA;protein_id=WP_003400321.1;transl_table=11 NZ_KK316850.1 RefSeq gene 13133 13558 . - . ID=gene-AL60_RS14450;Name=AL60_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14450;old_locus_tag=AL60_01796 NZ_KK316850.1 Protein Homology CDS 13133 13558 . - 0 ID=cds-WP_003899772.1;Parent=gene-AL60_RS14450;Dbxref=GenBank:WP_003899772.1;Name=WP_003899772.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214524.1;locus_tag=AL60_RS14450;product=PH domain-containing protein;protein_id=WP_003899772.1;transl_table=11 NZ_KK316850.1 RefSeq gene 13714 13995 . - . ID=gene-AL60_RS14455;Name=crgA;gbkey=Gene;gene=crgA;gene_biotype=protein_coding;locus_tag=AL60_RS14455;old_locus_tag=AL60_01797 NZ_KK316850.1 Protein Homology CDS 13714 13995 . - 0 ID=cds-WP_003400344.1;Parent=gene-AL60_RS14455;Dbxref=GenBank:WP_003400344.1;Name=WP_003400344.1;gbkey=CDS;gene=crgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214525.1;locus_tag=AL60_RS14455;product=cell division protein CrgA;protein_id=WP_003400344.1;transl_table=11 NZ_KK316850.1 RefSeq gene 14134 14877 . + . ID=gene-AL60_RS14460;Name=AL60_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14460;old_locus_tag=AL60_01798 NZ_KK316850.1 Protein Homology CDS 14134 14877 . + 0 ID=cds-WP_009937185.1;Parent=gene-AL60_RS14460;Dbxref=GenBank:WP_009937185.1;Name=WP_009937185.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008262548.1;locus_tag=AL60_RS14460;product=DUF881 domain-containing protein;protein_id=WP_009937185.1;transl_table=11 NZ_KK316850.1 RefSeq gene 14914 15612 . + . ID=gene-AL60_RS14465;Name=trpG;gbkey=Gene;gene=trpG;gene_biotype=protein_coding;locus_tag=AL60_RS14465;old_locus_tag=AL60_01799 NZ_KK316850.1 Protein Homology CDS 14914 15612 . + 0 ID=cds-WP_003899773.1;Parent=gene-AL60_RS14465;Dbxref=GenBank:WP_003899773.1;Name=WP_003899773.1;gbkey=CDS;gene=trpG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177615.1;locus_tag=AL60_RS14465;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_003899773.1;transl_table=11 NZ_KK316850.1 RefSeq gene 15590 17470 . - . ID=gene-AL60_RS14470;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=AL60_RS14470;old_locus_tag=AL60_01800 NZ_KK316850.1 Protein Homology CDS 15590 17470 . - 0 ID=cds-WP_003400356.1;Parent=gene-AL60_RS14470;Dbxref=GenBank:WP_003400356.1;Name=WP_003400356.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214528.1;locus_tag=AL60_RS14470;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_003400356.1;transl_table=11 NZ_KK316850.1 RefSeq gene 17467 18762 . - . ID=gene-AL60_RS14475;Name=pknA;gbkey=Gene;gene=pknA;gene_biotype=protein_coding;locus_tag=AL60_RS14475;old_locus_tag=AL60_01801 NZ_KK316850.1 Protein Homology CDS 17467 18762 . - 0 ID=cds-WP_003400358.1;Parent=gene-AL60_RS14475;Dbxref=GenBank:WP_003400358.1;Name=WP_003400358.1;gbkey=CDS;gene=pknA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214529.1;locus_tag=AL60_RS14475;product=serine/threonine protein kinase PknA;protein_id=WP_003400358.1;transl_table=11 NZ_KK316850.1 RefSeq gene 18759 20234 . - . ID=gene-AL60_RS14480;Name=pbpA;gbkey=Gene;gene=pbpA;gene_biotype=protein_coding;locus_tag=AL60_RS14480;old_locus_tag=AL60_01802 NZ_KK316850.1 Protein Homology CDS 18759 20234 . - 0 ID=cds-WP_003899775.1;Parent=gene-AL60_RS14480;Dbxref=GenBank:WP_003899775.1;Name=WP_003899775.1;gbkey=CDS;gene=pbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214530.1;locus_tag=AL60_RS14480;product=D%2CD-transpeptidase PbpA;protein_id=WP_003899775.1;transl_table=11 NZ_KK316850.1 RefSeq gene 20231 21640 . - . ID=gene-AL60_RS14485;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=AL60_RS14485;old_locus_tag=AL60_01803 NZ_KK316850.1 Protein Homology CDS 20231 21640 . - 0 ID=cds-WP_003400364.1;Parent=gene-AL60_RS14485;Dbxref=GenBank:WP_003400364.1;Name=WP_003400364.1;gbkey=CDS;gene=rodA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214531.1;locus_tag=AL60_RS14485;product=cell shape-determining peptidoglycan glycosyltransferase RodA;protein_id=WP_003400364.1;transl_table=11 NZ_KK316850.1 RefSeq gene 21637 23172 . - . ID=gene-AL60_RS14490;Name=pstP;gbkey=Gene;gene=pstP;gene_biotype=protein_coding;locus_tag=AL60_RS14490;old_locus_tag=AL60_01804 NZ_KK316850.1 Protein Homology CDS 21637 23172 . - 0 ID=cds-WP_003912500.1;Parent=gene-AL60_RS14490;Dbxref=GenBank:WP_003912500.1;Name=WP_003912500.1;gbkey=CDS;gene=pstP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385224.1;locus_tag=AL60_RS14490;product=serine/threonine phosphatase PstP;protein_id=WP_003912500.1;transl_table=11 NZ_KK316850.1 RefSeq gene 23270 23737 . - . ID=gene-AL60_RS14495;Name=fhaB;gbkey=Gene;gene=fhaB;gene_biotype=protein_coding;locus_tag=AL60_RS14495;old_locus_tag=AL60_01805 NZ_KK316850.1 Protein Homology CDS 23270 23737 . - 0 ID=cds-WP_003400373.1;Parent=gene-AL60_RS14495;Dbxref=GenBank:WP_003400373.1;Name=WP_003400373.1;gbkey=CDS;gene=fhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214533.1;locus_tag=AL60_RS14495;product=FHA domain-containing protein FhaB/FipA;protein_id=WP_003400373.1;transl_table=11 NZ_KK316850.1 RefSeq gene 23861 25444 . - . ID=gene-AL60_RS14500;Name=fhaA;gbkey=Gene;gene=fhaA;gene_biotype=protein_coding;locus_tag=AL60_RS14500;old_locus_tag=AL60_01806 NZ_KK316850.1 Protein Homology CDS 23861 25444 . - 0 ID=cds-WP_003912368.1;Parent=gene-AL60_RS14500;Dbxref=GenBank:WP_003912368.1;Name=WP_003912368.1;gbkey=CDS;gene=fhaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214534.1;locus_tag=AL60_RS14500;product=cell division-associated protein FhaA;protein_id=WP_003912368.1;transl_table=11 NZ_KK316850.1 RefSeq gene 25644 25726 . + . ID=gene-AL60_RS14505;Name=AL60_RS14505;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS14505;old_locus_tag=AL60_01807 NZ_KK316850.1 tRNAscan-SE tRNA 25644 25726 . + . ID=rna-AL60_RS14505;Parent=gene-AL60_RS14505;anticodon=(pos:25677..25679);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS14505;product=tRNA-Leu NZ_KK316850.1 tRNAscan-SE exon 25644 25726 . + . ID=exon-AL60_RS14505-1;Parent=rna-AL60_RS14505;anticodon=(pos:25677..25679);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS14505;product=tRNA-Leu NZ_KK316850.1 RefSeq gene 25913 26881 . - . ID=gene-AL60_RS14510;Name=AL60_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14510;old_locus_tag=AL60_01808 NZ_KK316850.1 Protein Homology CDS 25913 26881 . - 0 ID=cds-WP_003899778.1;Parent=gene-AL60_RS14510;Dbxref=GenBank:WP_003899778.1;Name=WP_003899778.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214535.1;locus_tag=AL60_RS14510;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_003899778.1;transl_table=11 NZ_KK316850.1 RefSeq gene 27023 27442 . - . ID=gene-AL60_RS14515;Name=whiB5;gbkey=Gene;gene=whiB5;gene_biotype=protein_coding;locus_tag=AL60_RS14515;old_locus_tag=AL60_01809 NZ_KK316850.1 Protein Homology CDS 27023 27442 . - 0 ID=cds-WP_003400388.1;Parent=gene-AL60_RS14515;Dbxref=GenBank:WP_003400388.1;Name=WP_003400388.1;gbkey=CDS;gene=whiB5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214536.1;locus_tag=AL60_RS14515;product=transcriptional regulator WhiB5;protein_id=WP_003400388.1;transl_table=11 NZ_KK316850.1 RefSeq gene 27595 28365 . + . ID=gene-AL60_RS14520;Name=AL60_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14520;old_locus_tag=AL60_01810 NZ_KK316850.1 Protein Homology CDS 27595 28365 . + 0 ID=cds-WP_003400391.1;Parent=gene-AL60_RS14520;Dbxref=GenBank:WP_003400391.1;Name=WP_003400391.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214537.1;locus_tag=AL60_RS14520;product=helix-turn-helix domain-containing protein;protein_id=WP_003400391.1;transl_table=11 NZ_KK316850.1 RefSeq gene 28362 29207 . + . ID=gene-AL60_RS14525;Name=AL60_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14525;old_locus_tag=AL60_01811 NZ_KK316850.1 Protein Homology CDS 28362 29207 . + 0 ID=cds-WP_003400393.1;Parent=gene-AL60_RS14525;Dbxref=GenBank:WP_003400393.1;Name=WP_003400393.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214538.1;locus_tag=AL60_RS14525;product=C40 family peptidase;protein_id=WP_003400393.1;transl_table=11 NZ_KK316850.1 RefSeq gene 29245 29607 . + . ID=gene-AL60_RS14530;Name=AL60_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14530;old_locus_tag=AL60_01812 NZ_KK316850.1 Protein Homology CDS 29245 29607 . + 0 ID=cds-WP_003400395.1;Parent=gene-AL60_RS14530;Dbxref=GenBank:WP_003400395.1;Name=WP_003400395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214539.1;locus_tag=AL60_RS14530;product=DUF4226 domain-containing protein;protein_id=WP_003400395.1;transl_table=11 NZ_KK316850.1 RefSeq pseudogene 29740 31151 . + . ID=gene-AL60_RS14535;Name=AL60_RS14535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS14535;old_locus_tag=AL60_01813;pseudo=true NZ_KK316850.1 Protein Homology CDS 29740 31151 . + 0 ID=cds-AL60_RS14535;Parent=gene-AL60_RS14535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302351.1;locus_tag=AL60_RS14535;product=DUF4226 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316850.1 RefSeq gene 31189 31506 . + . ID=gene-AL60_RS14540;Name=AL60_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14540;old_locus_tag=AL60_01814 NZ_KK316850.1 Protein Homology CDS 31189 31506 . + 0 ID=cds-WP_003400401.1;Parent=gene-AL60_RS14540;Dbxref=GenBank:WP_003400401.1;Name=WP_003400401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214541.1;locus_tag=AL60_RS14540;product=ESX-1 secretion-associated protein;protein_id=WP_003400401.1;transl_table=11 NZ_KK316850.1 RefSeq gene 31514 31819 . + . ID=gene-AL60_RS14545;Name=AL60_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14545;old_locus_tag=AL60_01815 NZ_KK316850.1 Protein Homology CDS 31514 31819 . + 0 ID=cds-WP_003400405.1;Parent=gene-AL60_RS14545;Dbxref=GenBank:WP_003400405.1;Name=WP_003400405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214542.1;locus_tag=AL60_RS14545;product=DUF2694 domain-containing protein;protein_id=WP_003400405.1;transl_table=11 NZ_KK316850.1 RefSeq gene 31824 31967 . - . ID=gene-AL60_RS27130;Name=AL60_RS27130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27130 NZ_KK316850.1 Protein Homology CDS 31824 31967 . - 0 ID=cds-WP_003400408.1;Parent=gene-AL60_RS27130;Dbxref=GenBank:WP_003400408.1;Name=WP_003400408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400408.1;locus_tag=AL60_RS27130;product=hypothetical protein;protein_id=WP_003400408.1;transl_table=11 NZ_KK316850.1 RefSeq gene 32057 33154 . + . ID=gene-AL60_RS14550;Name=AL60_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14550;old_locus_tag=AL60_01816 NZ_KK316850.1 Protein Homology CDS 32057 33154 . + 0 ID=cds-WP_003400411.1;Parent=gene-AL60_RS14550;Dbxref=GenBank:WP_003400411.1;Name=WP_003400411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214543.1;locus_tag=AL60_RS14550;product=DUF5631 domain-containing protein;protein_id=WP_003400411.1;transl_table=11 NZ_KK316850.1 RefSeq pseudogene 33224 33550 . + . ID=gene-AL60_RS0104680;Name=AL60_RS0104680;end_range=33550,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0104680;partial=true;pseudo=true NZ_KK316850.1 Protein Homology CDS 33224 33550 . + 0 ID=cds-AL60_RS0104680;Parent=gene-AL60_RS0104680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=33550,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214544.1;locus_tag=AL60_RS0104680;partial=true;product=DUF2710 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316850.1 RefSeq pseudogene 33567 33692 . + . ID=gene-AL60_RS27915;Name=AL60_RS27915;end_range=33692,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27915;partial=true;pseudo=true;start_range=.,33567 NZ_KK316850.1 Protein Homology CDS 33567 33692 . + 0 ID=cds-AL60_RS27915;Parent=gene-AL60_RS27915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=33692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015630641.1;locus_tag=AL60_RS27915;partial=true;product=hypothetical protein;pseudo=true;start_range=.,33567;transl_table=11 NZ_KK316850.1 RefSeq gene 34295 36610 . + . ID=gene-AL60_RS14555;Name=AL60_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14555;old_locus_tag=AL60_01818 NZ_KK316850.1 Protein Homology CDS 34295 36610 . + 0 ID=cds-WP_003905217.1;Parent=gene-AL60_RS14555;Dbxref=GenBank:WP_003905217.1;Name=WP_003905217.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214546.1;locus_tag=AL60_RS14555;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_003905217.1;transl_table=11 NZ_KK316850.1 RefSeq gene 36607 36870 . + . ID=gene-AL60_RS14560;Name=acpA;gbkey=Gene;gene=acpA;gene_biotype=protein_coding;locus_tag=AL60_RS14560;old_locus_tag=AL60_01819 NZ_KK316850.1 Protein Homology CDS 36607 36870 . + 0 ID=cds-WP_003400418.1;Parent=gene-AL60_RS14560;Dbxref=GenBank:WP_003400418.1;Name=WP_003400418.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;gene=acpA;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214547.1;locus_tag=AL60_RS14560;product=acyl carrier protein;protein_id=WP_003400418.1;transl_table=11 NZ_KK316850.1 RefSeq gene 36867 37262 . + . ID=gene-AL60_RS14565;Name=AL60_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14565;old_locus_tag=AL60_01820 NZ_KK316850.1 Protein Homology CDS 36867 37262 . + 0 ID=cds-WP_003400421.1;Parent=gene-AL60_RS14565;Dbxref=GenBank:WP_003400421.1;Name=WP_003400421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214548.1;locus_tag=AL60_RS14565;product=nuclear transport factor 2 family protein;protein_id=WP_003400421.1;transl_table=11 NZ_KK316850.1 RefSeq gene 37259 38947 . + . ID=gene-AL60_RS14570;Name=fadD34;gbkey=Gene;gene=fadD34;gene_biotype=protein_coding;locus_tag=AL60_RS14570;old_locus_tag=AL60_01821 NZ_KK316850.1 Protein Homology CDS 37259 38947 . + 0 ID=cds-WP_003400425.1;Parent=gene-AL60_RS14570;Dbxref=GenBank:WP_003400425.1;Name=WP_003400425.1;gbkey=CDS;gene=fadD34;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177686.1;locus_tag=AL60_RS14570;product=fatty acyl-AMP ligase FadD34;protein_id=WP_003400425.1;transl_table=11 NZ_KK316850.1 RefSeq gene 39056 39829 . - . ID=gene-AL60_RS14575;Name=AL60_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14575;old_locus_tag=AL60_01822 NZ_KK316850.1 Protein Homology CDS 39056 39829 . - 0 ID=cds-WP_003400427.1;Parent=gene-AL60_RS14575;Dbxref=GenBank:WP_003400427.1;Name=WP_003400427.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214550.1;locus_tag=AL60_RS14575;product=TIGR03084 family metal-binding protein;protein_id=WP_003400427.1;transl_table=11 NZ_KK316850.1 RefSeq gene 39877 41202 . - . ID=gene-AL60_RS14580;Name=AL60_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14580;old_locus_tag=AL60_01823 NZ_KK316850.1 Protein Homology CDS 39877 41202 . - 0 ID=cds-WP_003400431.1;Parent=gene-AL60_RS14580;Dbxref=GenBank:WP_003400431.1;Name=WP_003400431.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214551.1;locus_tag=AL60_RS14580;product=MFS transporter;protein_id=WP_003400431.1;transl_table=11 NZ_KK316850.1 RefSeq gene 41304 41912 . + . ID=gene-AL60_RS14585;Name=AL60_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14585;old_locus_tag=AL60_01824 NZ_KK316850.1 Protein Homology CDS 41304 41912 . + 0 ID=cds-WP_003400460.1;Parent=gene-AL60_RS14585;Dbxref=GenBank:WP_003400460.1;Name=WP_003400460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214552.1;locus_tag=AL60_RS14585;product=YqgE/AlgH family protein;protein_id=WP_003400460.1;transl_table=11 NZ_KK316850.1 RefSeq gene 42004 42351 . - . ID=gene-AL60_RS14590;Name=AL60_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14590;old_locus_tag=AL60_01825 NZ_KK316850.1 Protein Homology CDS 42004 42351 . - 0 ID=cds-WP_003907179.1;Parent=gene-AL60_RS14590;Dbxref=GenBank:WP_003907179.1;Name=WP_003907179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214553.1;locus_tag=AL60_RS14590;product=hypothetical protein;protein_id=WP_003907179.1;transl_table=11 NZ_KK316850.1 RefSeq gene 42433 43365 . - . ID=gene-AL60_RS14595;Name=AL60_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14595;old_locus_tag=AL60_01826 NZ_KK316850.1 Protein Homology CDS 42433 43365 . - 0 ID=cds-WP_003900793.1;Parent=gene-AL60_RS14595;Dbxref=GenBank:WP_003900793.1;Name=WP_003900793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214554.2;locus_tag=AL60_RS14595;product=LpqN/LpqT family lipoprotein;protein_id=WP_003900793.1;transl_table=11 NZ_KK316850.1 RefSeq gene 43562 46471 . + . ID=gene-AL60_RS14600;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AL60_RS14600;old_locus_tag=AL60_01827 NZ_KK316850.1 Protein Homology CDS 43562 46471 . + 0 ID=cds-WP_003900794.1;Parent=gene-AL60_RS14600;Dbxref=GenBank:WP_003900794.1;Name=WP_003900794.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214555.1;locus_tag=AL60_RS14600;product=leucine--tRNA ligase;protein_id=WP_003900794.1;transl_table=11 NZ_KK316850.1 RefSeq gene 46581 47084 . - . ID=gene-AL60_RS14605;Name=AL60_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14605;old_locus_tag=AL60_01828 NZ_KK316850.1 Protein Homology CDS 46581 47084 . - 0 ID=cds-WP_003912416.1;Parent=gene-AL60_RS14605;Dbxref=GenBank:WP_003912416.1;Name=WP_003912416.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007771688.1;locus_tag=AL60_RS14605;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003912416.1;transl_table=11 NZ_KK316850.1 RefSeq gene 47366 48100 . - . ID=gene-AL60_RS14610;Name=AL60_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14610;old_locus_tag=AL60_01829 NZ_KK316850.1 Protein Homology CDS 47366 48100 . - 0 ID=cds-WP_003899786.1;Parent=gene-AL60_RS14610;Dbxref=GenBank:WP_003899786.1;Name=WP_003899786.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214557.1;locus_tag=AL60_RS14610;product=GntR family transcriptional regulator;protein_id=WP_003899786.1;transl_table=11 NZ_KK316850.1 RefSeq gene 48233 49027 . - . ID=gene-AL60_RS14615;Name=AL60_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14615;old_locus_tag=AL60_01830 NZ_KK316850.1 Protein Homology CDS 48233 49027 . - 0 ID=cds-WP_003400486.1;Parent=gene-AL60_RS14615;Dbxref=GenBank:WP_003400486.1;Name=WP_003400486.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214558.1;locus_tag=AL60_RS14615;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003400486.1;transl_table=11 NZ_KK316850.1 RefSeq gene 49043 49939 . - . ID=gene-AL60_RS14620;Name=AL60_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14620;old_locus_tag=AL60_01831 NZ_KK316850.1 Protein Homology CDS 49043 49939 . - 0 ID=cds-WP_003400489.1;Parent=gene-AL60_RS14620;Dbxref=GenBank:WP_003400489.1;Name=WP_003400489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214559.1;locus_tag=AL60_RS14620;product=alpha/beta fold hydrolase;protein_id=WP_003400489.1;transl_table=11 NZ_KK316850.1 RefSeq gene 50021 51124 . - . ID=gene-AL60_RS14625;Name=AL60_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14625;old_locus_tag=AL60_01832 NZ_KK316850.1 Protein Homology CDS 50021 51124 . - 0 ID=cds-WP_003902822.1;Parent=gene-AL60_RS14625;Dbxref=GenBank:WP_003902822.1;Name=WP_003902822.1;Ontology_term=GO:0006021,GO:0008654,GO:0004512;gbkey=CDS;go_function=inositol-3-phosphate synthase activity|0004512||IEA;go_process=inositol biosynthetic process|0006021||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214560.1;locus_tag=AL60_RS14625;product=inositol-3-phosphate synthase;protein_id=WP_003902822.1;transl_table=11 NZ_KK316850.1 RefSeq gene 51185 51727 . - . ID=gene-AL60_RS14630;Name=AL60_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14630;old_locus_tag=AL60_01833 NZ_KK316850.1 Protein Homology CDS 51185 51727 . - 0 ID=cds-WP_003899787.1;Parent=gene-AL60_RS14630;Dbxref=GenBank:WP_003899787.1;Name=WP_003899787.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214561.1;locus_tag=AL60_RS14630;product=PadR family transcriptional regulator;protein_id=WP_003899787.1;transl_table=11 NZ_KK316850.1 RefSeq gene 51828 52697 . - . ID=gene-AL60_RS14635;Name=AL60_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14635;old_locus_tag=AL60_01834 NZ_KK316850.1 Protein Homology CDS 51828 52697 . - 0 ID=cds-WP_003907183.1;Parent=gene-AL60_RS14635;Dbxref=GenBank:WP_003907183.1;Name=WP_003907183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214562.1;locus_tag=AL60_RS14635;product=DUF1707 SHOCT-like domain-containing protein;protein_id=WP_003907183.1;transl_table=11 NZ_KK316850.1 RefSeq gene 52810 53244 . + . ID=gene-AL60_RS14640;Name=AL60_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14640;old_locus_tag=AL60_01835 NZ_KK316850.1 Protein Homology CDS 52810 53244 . + 0 ID=cds-WP_003899789.1;Parent=gene-AL60_RS14640;Dbxref=GenBank:WP_003899789.1;Name=WP_003899789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012392073.1;locus_tag=AL60_RS14640;product=DUF5318 family protein;protein_id=WP_003899789.1;transl_table=11 NZ_KK316850.1 RefSeq gene 53237 55702 . + . ID=gene-AL60_RS14645;Name=ponA1;gbkey=Gene;gene=ponA1;gene_biotype=protein_coding;locus_tag=AL60_RS14645;old_locus_tag=AL60_01836 NZ_KK316850.1 Protein Homology CDS 53237 55702 . + 0 ID=cds-WP_009937192.1;Parent=gene-AL60_RS14645;Dbxref=GenBank:WP_009937192.1;Name=WP_009937192.1;gbkey=CDS;gene=ponA1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899790.1;locus_tag=AL60_RS14645;product=transglycosylase/D%2CD-transpeptidase PonA1;protein_id=WP_009937192.1;transl_table=11 NZ_KK316850.1 RefSeq gene 55699 57381 . + . ID=gene-AL60_RS14650;Name=AL60_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14650;old_locus_tag=AL60_01837 NZ_KK316850.1 Protein Homology CDS 55699 57381 . + 0 ID=cds-WP_003400514.1;Parent=gene-AL60_RS14650;Dbxref=GenBank:WP_003400514.1;Name=WP_003400514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214565.1;locus_tag=AL60_RS14650;product=glycosyltransferase family 87 protein;protein_id=WP_003400514.1;transl_table=11 NZ_KK316850.1 RefSeq gene 57338 57976 . + . ID=gene-AL60_RS14655;Name=AL60_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14655;old_locus_tag=AL60_01838 NZ_KK316850.1 Protein Homology CDS 57338 57976 . + 0 ID=cds-WP_003912418.1;Parent=gene-AL60_RS14655;Dbxref=GenBank:WP_003912418.1;Name=WP_003912418.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912418.1;locus_tag=AL60_RS14655;product=DJ-1/PfpI family protein;protein_id=WP_003912418.1;transl_table=11 NZ_KK316850.1 RefSeq gene 58195 58485 . + . ID=gene-AL60_RS14660;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AL60_RS14660;old_locus_tag=AL60_01839 NZ_KK316850.1 Protein Homology CDS 58195 58485 . + 0 ID=cds-WP_003400520.1;Parent=gene-AL60_RS14660;Dbxref=GenBank:WP_003400520.1;Name=WP_003400520.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214567.1;locus_tag=AL60_RS14660;product=30S ribosomal protein S6;protein_id=WP_003400520.1;transl_table=11 NZ_KK316850.1 RefSeq gene 58589 59083 . + . ID=gene-AL60_RS14665;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=AL60_RS14665;old_locus_tag=AL60_01840 NZ_KK316850.1 Protein Homology CDS 58589 59083 . + 0 ID=cds-WP_003400534.1;Parent=gene-AL60_RS14665;Dbxref=GenBank:WP_003400534.1;Name=WP_003400534.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214568.1;locus_tag=AL60_RS14665;product=single-stranded DNA-binding protein;protein_id=WP_003400534.1;transl_table=11 NZ_KK316850.1 RefSeq gene 59125 59379 . + . ID=gene-AL60_RS14670;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AL60_RS14670;old_locus_tag=AL60_01841 NZ_KK316850.1 Protein Homology CDS 59125 59379 . + 0 ID=cds-WP_003400540.1;Parent=gene-AL60_RS14670;Dbxref=GenBank:WP_003400540.1;Name=WP_003400540.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874730.1;locus_tag=AL60_RS14670;product=30S ribosomal protein S18;protein_id=WP_003400540.1;transl_table=11 NZ_KK316850.1 RefSeq gene 59412 59870 . + . ID=gene-AL60_RS14675;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AL60_RS14675;old_locus_tag=AL60_01842 NZ_KK316850.1 Protein Homology CDS 59412 59870 . + 0 ID=cds-WP_003400543.1;Parent=gene-AL60_RS14675;Dbxref=GenBank:WP_003400543.1;Name=WP_003400543.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214570.1;locus_tag=AL60_RS14675;product=50S ribosomal protein L9;protein_id=WP_003400543.1;transl_table=11 NZ_KK316850.1 RefSeq gene 60399 63023 . + . ID=gene-AL60_RS14685;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=AL60_RS14685;old_locus_tag=AL60_01844 NZ_KK316850.1 Protein Homology CDS 60399 63023 . + 0 ID=cds-WP_003400547.1;Parent=gene-AL60_RS14685;Dbxref=GenBank:WP_003400547.1;Name=WP_003400547.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214572.1;locus_tag=AL60_RS14685;product=replicative DNA helicase;protein_id=WP_003400547.1;transl_table=11 NZ_KK316850.1 RefSeq gene 63203 63895 . + . ID=gene-AL60_RS14690;Name=darT;gbkey=Gene;gene=darT;gene_biotype=protein_coding;locus_tag=AL60_RS14690;old_locus_tag=AL60_01845 NZ_KK316850.1 Protein Homology CDS 63203 63895 . + 0 ID=cds-WP_003907189.1;Parent=gene-AL60_RS14690;Dbxref=GenBank:WP_003907189.1;Name=WP_003907189.1;gbkey=CDS;gene=darT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214573.1;locus_tag=AL60_RS14690;product=toxin-antitoxin system toxin DarT;protein_id=WP_003907189.1;transl_table=11 NZ_KK316850.1 RefSeq gene 63912 64970 . + . ID=gene-AL60_RS14695;Name=darG;gbkey=Gene;gene=darG;gene_biotype=protein_coding;locus_tag=AL60_RS14695;old_locus_tag=AL60_01846 NZ_KK316850.1 Protein Homology CDS 63912 64970 . + 0 ID=cds-WP_003400551.1;Parent=gene-AL60_RS14695;Dbxref=GenBank:WP_003400551.1;Name=WP_003400551.1;gbkey=CDS;gene=darG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214574.1;locus_tag=AL60_RS14695;product=toxin-antitoxin system antitoxin DNA ADP-ribosyl glycohydrolase DarG;protein_id=WP_003400551.1;transl_table=11 NZ_KK316850.1 RefSeq gene 65015 65353 . - . ID=gene-AL60_RS25910;Name=AL60_RS25910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25910;old_locus_tag=AL60_01847 NZ_KK316850.1 Protein Homology CDS 65015 65353 . - 0 ID=cds-WP_003899794.1;Parent=gene-AL60_RS25910;Dbxref=GenBank:WP_003899794.1;Name=WP_003899794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408697.1;locus_tag=AL60_RS25910;product=hypothetical protein;protein_id=WP_003899794.1;transl_table=11 NZ_KK316850.1 RefSeq gene 65555 66697 . + . ID=gene-AL60_RS14700;Name=AL60_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14700;old_locus_tag=AL60_01848 NZ_KK316850.1 Protein Homology CDS 65555 66697 . + 0 ID=cds-WP_003400562.1;Parent=gene-AL60_RS14700;Dbxref=GenBank:WP_003400562.1;Name=WP_003400562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177689.1;locus_tag=AL60_RS14700;product=glycoside hydrolase family 6 protein;protein_id=WP_003400562.1;transl_table=11 NZ_KK316850.1 RefSeq gene 66926 68365 . + . ID=gene-AL60_RS14705;Name=AL60_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14705;old_locus_tag=AL60_01849 NZ_KK316850.1 Protein Homology CDS 66926 68365 . + 0 ID=cds-WP_003901784.1;Parent=gene-AL60_RS14705;Dbxref=GenBank:WP_003901784.1;Name=WP_003901784.1;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214577.1;locus_tag=AL60_RS14705;product=FAD-binding oxidoreductase;protein_id=WP_003901784.1;transl_table=11 NZ_KK316850.1 RefSeq gene 68421 68582 . + . ID=gene-AL60_RS25915;Name=AL60_RS25915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25915 NZ_KK316850.1 Protein Homology CDS 68421 68582 . + 0 ID=cds-WP_003899796.1;Parent=gene-AL60_RS25915;Dbxref=GenBank:WP_003899796.1;Name=WP_003899796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030026.1;locus_tag=AL60_RS25915;product=hypothetical protein;protein_id=WP_003899796.1;transl_table=11 NZ_KK316850.1 RefSeq gene 68623 71562 . + . ID=gene-AL60_RS14710;Name=AL60_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14710;old_locus_tag=AL60_01850 NZ_KK316850.1 Protein Homology CDS 68623 71562 . + 0 ID=cds-WP_031696515.1;Parent=gene-AL60_RS14710;Dbxref=GenBank:WP_031696515.1;Name=WP_031696515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214578.1;locus_tag=AL60_RS14710;product=UPF0182 family protein;protein_id=WP_031696515.1;transl_table=11 NZ_KK316850.1 RefSeq gene 71629 71868 . + . ID=gene-AL60_RS14715;Name=AL60_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14715;old_locus_tag=AL60_01851 NZ_KK316850.1 Protein Homology CDS 71629 71868 . + 0 ID=cds-WP_003400577.1;Parent=gene-AL60_RS14715;Dbxref=GenBank:WP_003400577.1;Name=WP_003400577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408701.1;locus_tag=AL60_RS14715;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_003400577.1;transl_table=11 NZ_KK316850.1 RefSeq gene 71861 72262 . + . ID=gene-AL60_RS14720;Name=vapC1;gbkey=Gene;gene=vapC1;gene_biotype=protein_coding;locus_tag=AL60_RS14720;old_locus_tag=AL60_01852 NZ_KK316850.1 Protein Homology CDS 71861 72262 . + 0 ID=cds-WP_003400580.1;Parent=gene-AL60_RS14720;Dbxref=GenBank:WP_003400580.1;Name=WP_003400580.1;gbkey=CDS;gene=vapC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214579.1;locus_tag=AL60_RS14720;product=type II toxin-antitoxin system ribonuclease VapC1;protein_id=WP_003400580.1;transl_table=11 NZ_KK316850.1 RefSeq gene 72314 74551 . - . ID=gene-AL60_RS14725;Name=AL60_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14725;old_locus_tag=AL60_01853 NZ_KK316850.1 Protein Homology CDS 72314 74551 . - 0 ID=cds-WP_003899797.1;Parent=gene-AL60_RS14725;Dbxref=GenBank:WP_003899797.1;Name=WP_003899797.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214580.1;locus_tag=AL60_RS14725;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_003899797.1;transl_table=11 NZ_KK316850.1 RefSeq gene 74669 75238 . - . ID=gene-AL60_RS14730;Name=AL60_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14730;old_locus_tag=AL60_01854 NZ_KK316850.1 Protein Homology CDS 74669 75238 . - 0 ID=cds-WP_003400591.1;Parent=gene-AL60_RS14730;Dbxref=GenBank:WP_003400591.1;Name=WP_003400591.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214581.1;locus_tag=AL60_RS14730;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003400591.1;transl_table=11 NZ_KK316850.1 RefSeq gene 75341 76252 . + . ID=gene-AL60_RS14735;Name=AL60_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14735;old_locus_tag=AL60_01855 NZ_KK316850.1 Protein Homology CDS 75341 76252 . + 0 ID=cds-WP_003899798.1;Parent=gene-AL60_RS14735;Dbxref=GenBank:WP_003899798.1;Name=WP_003899798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214582.1;locus_tag=AL60_RS14735;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003899798.1;transl_table=11 NZ_KK316850.1 RefSeq gene 76277 77662 . - . ID=gene-AL60_RS14740;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=AL60_RS14740;old_locus_tag=AL60_01856 NZ_KK316850.1 Protein Homology CDS 76277 77662 . - 0 ID=cds-WP_003400600.1;Parent=gene-AL60_RS14740;Dbxref=GenBank:WP_003400600.1;Name=WP_003400600.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;gene=sdaA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214583.1;locus_tag=AL60_RS14740;product=L-serine ammonia-lyase;protein_id=WP_003400600.1;transl_table=11 NZ_KK316850.1 RefSeq gene 77659 78936 . - . ID=gene-AL60_RS14745;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AL60_RS14745;old_locus_tag=AL60_01857 NZ_KK316850.1 Protein Homology CDS 77659 78936 . - 0 ID=cds-WP_003899799.1;Parent=gene-AL60_RS14745;Dbxref=GenBank:WP_003899799.1;Name=WP_003899799.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214584.1;locus_tag=AL60_RS14745;product=serine hydroxymethyltransferase;protein_id=WP_003899799.1;transl_table=11 NZ_KK316850.1 cmsearch riboswitch 79244 79334 . - . ID=id-NZ_KK316850.1:79244..79334;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316850.1 RefSeq gene 79526 80224 . + . ID=gene-AL60_RS14750;Name=AL60_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14750;old_locus_tag=AL60_01858 NZ_KK316850.1 Protein Homology CDS 79526 80224 . + 0 ID=cds-WP_003907193.1;Parent=gene-AL60_RS14750;Dbxref=GenBank:WP_003907193.1;Name=WP_003907193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214585.1;locus_tag=AL60_RS14750;product=reverse transcriptase domain-containing protein;protein_id=WP_003907193.1;transl_table=11 NZ_KK316850.1 RefSeq pseudogene 80312 80584 . + . ID=gene-AL60_RS26840;Name=AL60_RS26840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26840;partial=true;pseudo=true;start_range=.,80312 NZ_KK316850.1 Protein Homology CDS 80312 80584 . + 0 ID=cds-AL60_RS26840;Parent=gene-AL60_RS26840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020724779.1;locus_tag=AL60_RS26840;partial=true;product=HNH endonuclease;pseudo=true;start_range=.,80312;transl_table=11 NZ_KK316850.1 RefSeq gene 80655 81704 . + . ID=gene-AL60_RS14755;Name=AL60_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14755;old_locus_tag=AL60_01859 NZ_KK316850.1 Protein Homology CDS 80655 81704 . + 0 ID=cds-WP_003400616.1;Parent=gene-AL60_RS14755;Dbxref=GenBank:WP_003400616.1;Name=WP_003400616.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214586.1;locus_tag=AL60_RS14755;product=ABC transporter permease;protein_id=WP_003400616.1;transl_table=11 NZ_KK316850.1 RefSeq gene 81707 82699 . + . ID=gene-AL60_RS14760;Name=AL60_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14760;old_locus_tag=AL60_01860 NZ_KK316850.1 Protein Homology CDS 81707 82699 . + 0 ID=cds-WP_003899801.1;Parent=gene-AL60_RS14760;Dbxref=GenBank:WP_003899801.1;Name=WP_003899801.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214587.1;locus_tag=AL60_RS14760;product=ABC transporter ATP-binding protein;protein_id=WP_003899801.1;transl_table=11 NZ_KK316850.1 RefSeq gene 82779 84014 . + . ID=gene-AL60_RS14765;Name=AL60_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14765;old_locus_tag=AL60_01861 NZ_KK316850.1 Protein Homology CDS 82779 84014 . + 0 ID=cds-WP_003400620.1;Parent=gene-AL60_RS14765;Dbxref=GenBank:WP_003400620.1;Name=WP_003400620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214588.1;locus_tag=AL60_RS14765;product=metal-dependent hydrolase family protein;protein_id=WP_003400620.1;transl_table=11 NZ_KK316850.1 RefSeq gene 84027 85199 . + . ID=gene-AL60_RS14770;Name=AL60_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14770;old_locus_tag=AL60_01862 NZ_KK316850.1 Protein Homology CDS 84027 85199 . + 0 ID=cds-WP_003400622.1;Parent=gene-AL60_RS14770;Dbxref=GenBank:WP_003400622.1;Name=WP_003400622.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214589.1;locus_tag=AL60_RS14770;product=MalY/PatB family protein;protein_id=WP_003400622.1;transl_table=11 NZ_KK316850.1 RefSeq gene 85214 85594 . - . ID=gene-AL60_RS14775;Name=AL60_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14775;old_locus_tag=AL60_01863 NZ_KK316850.1 Protein Homology CDS 85214 85594 . - 0 ID=cds-WP_003913085.1;Parent=gene-AL60_RS14775;Dbxref=GenBank:WP_003913085.1;Name=WP_003913085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913085.1;locus_tag=AL60_RS14775;product=hypothetical protein;protein_id=WP_003913085.1;transl_table=11 NZ_KK316850.1 RefSeq gene 85667 86497 . - . ID=gene-AL60_RS14780;Name=AL60_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14780;old_locus_tag=AL60_01864 NZ_KK316850.1 Protein Homology CDS 85667 86497 . - 0 ID=cds-WP_003900801.1;Parent=gene-AL60_RS14780;Dbxref=GenBank:WP_003900801.1;Name=WP_003900801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214591.1;locus_tag=AL60_RS14780;product=alpha/beta fold hydrolase;protein_id=WP_003900801.1;transl_table=11 NZ_KK316850.1 RefSeq gene 86559 87164 . + . ID=gene-AL60_RS14785;Name=AL60_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14785;old_locus_tag=AL60_01865 NZ_KK316850.1 Protein Homology CDS 86559 87164 . + 0 ID=cds-WP_003899803.1;Parent=gene-AL60_RS14785;Dbxref=GenBank:WP_003899803.1;Name=WP_003899803.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214592.1;locus_tag=AL60_RS14785;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899803.1;transl_table=11 NZ_KK316850.1 RefSeq gene 87239 87832 . - . ID=gene-AL60_RS14790;Name=AL60_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14790;old_locus_tag=AL60_01866 NZ_KK316850.1 Protein Homology CDS 87239 87832 . - 0 ID=cds-WP_003400645.1;Parent=gene-AL60_RS14790;Dbxref=GenBank:WP_003400645.1;Name=WP_003400645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177616.1;locus_tag=AL60_RS14790;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_003400645.1;transl_table=11 NZ_KK316850.1 RefSeq gene 87829 88035 . - . ID=gene-AL60_RS14795;Name=AL60_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14795;old_locus_tag=AL60_01867 NZ_KK316850.1 Protein Homology CDS 87829 88035 . - 0 ID=cds-WP_003400649.1;Parent=gene-AL60_RS14795;Dbxref=GenBank:WP_003400649.1;Name=WP_003400649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408717.1;locus_tag=AL60_RS14795;product=hypothetical protein;protein_id=WP_003400649.1;transl_table=11 NZ_KK316850.1 RefSeq gene 88235 89056 . + . ID=gene-AL60_RS14800;Name=AL60_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14800;old_locus_tag=AL60_01868 NZ_KK316850.1 Protein Homology CDS 88235 89056 . + 0 ID=cds-WP_003400655.1;Parent=gene-AL60_RS14800;Dbxref=GenBank:WP_003400655.1;Name=WP_003400655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214593.1;locus_tag=AL60_RS14800;product=dormancy-associated translation inhibitor;protein_id=WP_003400655.1;transl_table=11 NZ_KK316850.1 RefSeq gene 89053 89511 . + . ID=gene-AL60_RS14805;Name=AL60_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14805;old_locus_tag=AL60_01869 NZ_KK316850.1 Protein Homology CDS 89053 89511 . + 0 ID=cds-WP_003899804.1;Parent=gene-AL60_RS14805;Dbxref=GenBank:WP_003899804.1;Name=WP_003899804.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214594.1;locus_tag=AL60_RS14805;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_003899804.1;transl_table=11 NZ_KK316850.1 RefSeq gene 89606 89950 . + . ID=gene-AL60_RS14810;Name=AL60_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14810;old_locus_tag=AL60_01870 NZ_KK316850.1 Protein Homology CDS 89606 89950 . + 0 ID=cds-WP_003400657.1;Parent=gene-AL60_RS14810;Dbxref=GenBank:WP_003400657.1;Name=WP_003400657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214595.1;locus_tag=AL60_RS14810;product=lsr2/espR transcriptional regulator;protein_id=WP_003400657.1;transl_table=11 NZ_KK316850.1 RefSeq gene 89955 90434 . + . ID=gene-AL60_RS14815;Name=AL60_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14815;old_locus_tag=AL60_01871 NZ_KK316850.1 Protein Homology CDS 89955 90434 . + 0 ID=cds-WP_003400658.1;Parent=gene-AL60_RS14815;Dbxref=GenBank:WP_003400658.1;Name=WP_003400658.1;Ontology_term=GO:0022900,GO:0008137,GO:0048038,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,quinone binding|0048038||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214596.2;locus_tag=AL60_RS14815;product=NADH-quinone oxidoreductase subunit B family protein;protein_id=WP_003400658.1;transl_table=11 NZ_KK316850.1 RefSeq gene 90431 92353 . + . ID=gene-AL60_RS14820;Name=AL60_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14820;old_locus_tag=AL60_01872 NZ_KK316850.1 Protein Homology CDS 90431 92353 . + 0 ID=cds-WP_003907280.1;Parent=gene-AL60_RS14820;Dbxref=GenBank:WP_003907280.1;Name=WP_003907280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214597.1;locus_tag=AL60_RS14820;product=oxidoreductase;protein_id=WP_003907280.1;transl_table=11 NZ_KK316850.1 RefSeq gene 92359 93309 . + . ID=gene-AL60_RS14825;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=AL60_RS14825;old_locus_tag=AL60_01873 NZ_KK316850.1 Protein Homology CDS 92359 93309 . + 0 ID=cds-WP_003900802.1;Parent=gene-AL60_RS14825;Dbxref=GenBank:WP_003900802.1;Name=WP_003900802.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;gene=hycD;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214598.1;locus_tag=AL60_RS14825;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_003900802.1;transl_table=11 NZ_KK316850.1 RefSeq gene 93320 93982 . + . ID=gene-AL60_RS14830;Name=AL60_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14830;old_locus_tag=AL60_01874 NZ_KK316850.1 Protein Homology CDS 93320 93982 . + 0 ID=cds-WP_003400661.1;Parent=gene-AL60_RS14830;Dbxref=GenBank:WP_003400661.1;Name=WP_003400661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214599.1;locus_tag=AL60_RS14830;product=hydrogenase HycP;protein_id=WP_003400661.1;transl_table=11 NZ_KK316850.1 RefSeq gene 93982 95448 . + . ID=gene-AL60_RS14835;Name=hycQ;gbkey=Gene;gene=hycQ;gene_biotype=protein_coding;locus_tag=AL60_RS14835;old_locus_tag=AL60_01875 NZ_KK316850.1 Protein Homology CDS 93982 95448 . + 0 ID=cds-WP_003400662.1;Parent=gene-AL60_RS14835;Dbxref=GenBank:WP_003400662.1;Name=WP_003400662.1;gbkey=CDS;gene=hycQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214600.1;locus_tag=AL60_RS14835;product=hydrogenase HycQ;protein_id=WP_003400662.1;transl_table=11 NZ_KK316850.1 RefSeq gene 95445 96923 . + . ID=gene-AL60_RS14840;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=AL60_RS14840;old_locus_tag=AL60_01876 NZ_KK316850.1 Protein Homology CDS 95445 96923 . + 0 ID=cds-WP_003400663.1;Parent=gene-AL60_RS14840;Dbxref=GenBank:WP_003400663.1;Name=WP_003400663.1;Ontology_term=GO:0008137;gbkey=CDS;gene=hycE;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214601.1;locus_tag=AL60_RS14840;product=hydrogenase large subunit;protein_id=WP_003400663.1;transl_table=11 NZ_KK316850.1 RefSeq gene 97153 97632 . + . ID=gene-AL60_RS0104720;Name=AL60_RS0104720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104720;old_locus_tag=AL60_01877 NZ_KK316850.1 Protein Homology CDS 97153 97632 . + 0 ID=cds-WP_003899806.1;Parent=gene-AL60_RS0104720;Dbxref=GenBank:WP_003899806.1;Name=WP_003899806.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899806.1;locus_tag=AL60_RS0104720;product=SRPBCC family protein;protein_id=WP_003899806.1;transl_table=11 NZ_KK316850.1 RefSeq pseudogene 97777 98382 . + . ID=gene-AL60_RS14845;Name=AL60_RS14845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS14845;old_locus_tag=AL60_01878;partial=true;pseudo=true;start_range=.,97777 NZ_KK316850.1 Protein Homology CDS 97777 98382 . + 0 ID=cds-AL60_RS14845;Parent=gene-AL60_RS14845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019970694.1;locus_tag=AL60_RS14845;partial=true;product=class I SAM-dependent methyltransferase;pseudo=true;start_range=.,97777;transl_table=11 NZ_KK316850.1 RefSeq gene 98511 99281 . + . ID=gene-AL60_RS14850;Name=AL60_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14850;old_locus_tag=AL60_01879 NZ_KK316850.1 Protein Homology CDS 98511 99281 . + 0 ID=cds-WP_003899807.1;Parent=gene-AL60_RS14850;Dbxref=GenBank:WP_003899807.1;Name=WP_003899807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214604.1;locus_tag=AL60_RS14850;product=DUF2127 domain-containing protein;protein_id=WP_003899807.1;transl_table=11 NZ_KK316850.1 RefSeq gene 99715 100482 . + . ID=gene-AL60_RS14855;Name=mtn;gbkey=Gene;gene=mtn;gene_biotype=protein_coding;locus_tag=AL60_RS14855;old_locus_tag=AL60_01880 NZ_KK316850.1 Protein Homology CDS 99715 100482 . + 0 ID=cds-WP_003400678.1;Parent=gene-AL60_RS14855;Dbxref=GenBank:WP_003400678.1;Name=WP_003400678.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtn;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214605.1;locus_tag=AL60_RS14855;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_003400678.1;transl_table=11 NZ_KK316850.1 RefSeq gene 100614 102899 . + . ID=gene-AL60_RS14860;Name=ctpA;gbkey=Gene;gene=ctpA;gene_biotype=protein_coding;locus_tag=AL60_RS14860;old_locus_tag=AL60_01881 NZ_KK316850.1 Protein Homology CDS 100614 102899 . + 0 ID=cds-WP_011961619.1;Parent=gene-AL60_RS14860;Dbxref=GenBank:WP_011961619.1;Name=WP_011961619.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=ctpA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214606.1;locus_tag=AL60_RS14860;product=heavy metal translocating P-type ATPase;protein_id=WP_011961619.1;transl_table=11 NZ_KK316850.1 RefSeq gene 102846 103556 . - . ID=gene-AL60_RS14865;Name=AL60_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14865;old_locus_tag=AL60_01882 NZ_KK316850.1 Protein Homology CDS 102846 103556 . - 0 ID=cds-WP_003912510.1;Parent=gene-AL60_RS14865;Dbxref=GenBank:WP_003912510.1;Name=WP_003912510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302401.1;locus_tag=AL60_RS14865;product=zf-HC2 domain-containing protein;protein_id=WP_003912510.1;transl_table=11 NZ_KK316850.1 RefSeq pseudogene 103741 105133 . - . ID=gene-AL60_RS26845;Name=AL60_RS26845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26845;old_locus_tag=AL60_01883;pseudo=true NZ_KK316850.1 Protein Homology CDS 103741 105133 . - 0 ID=cds-AL60_RS26845;Parent=gene-AL60_RS26845;Note=frameshifted;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001758.1;locus_tag=AL60_RS26845;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_KK316850.1 RefSeq gene 105356 106747 . + . ID=gene-AL60_RS14875;Name=AL60_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14875;old_locus_tag=AL60_01885 NZ_KK316850.1 Protein Homology CDS 105356 106747 . + 0 ID=cds-WP_003400781.1;Parent=gene-AL60_RS14875;Dbxref=GenBank:WP_003400781.1;Name=WP_003400781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177690.1;locus_tag=AL60_RS14875;product=PPE family protein;protein_id=WP_003400781.1;transl_table=11 NZ_KK316850.1 RefSeq gene 106766 107635 . + . ID=gene-AL60_RS14880;Name=scoE;gbkey=Gene;gene=scoE;gene_biotype=protein_coding;locus_tag=AL60_RS14880;old_locus_tag=AL60_01886 NZ_KK316850.1 Protein Homology CDS 106766 107635 . + 0 ID=cds-WP_003400786.1;Parent=gene-AL60_RS14880;Dbxref=GenBank:WP_003400786.1;Name=WP_003400786.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;gene=scoE;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214611.1;locus_tag=AL60_RS14880;product=(3R)-3-[(carboxymethyl)amino]fatty acid oxygenase/decarboxylase;protein_id=WP_003400786.1;transl_table=11 NZ_KK316850.1 RefSeq gene 107632 108183 . + . ID=gene-AL60_RS14885;Name=fcoT;gbkey=Gene;gene=fcoT;gene_biotype=protein_coding;locus_tag=AL60_RS14885;old_locus_tag=AL60_01887 NZ_KK316850.1 Protein Homology CDS 107632 108183 . + 0 ID=cds-WP_003899810.1;Parent=gene-AL60_RS14885;Dbxref=GenBank:WP_003899810.1;Name=WP_003899810.1;gbkey=CDS;gene=fcoT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214612.1;locus_tag=AL60_RS14885;product=fatty acyl CoA thioesterase FcoT;protein_id=WP_003899810.1;transl_table=11 NZ_KK316850.1 RefSeq gene 108212 109810 . + . ID=gene-AL60_RS14890;Name=fadD10;gbkey=Gene;gene=fadD10;gene_biotype=protein_coding;locus_tag=AL60_RS14890;old_locus_tag=AL60_01888 NZ_KK316850.1 Protein Homology CDS 108212 109810 . + 0 ID=cds-WP_003916215.1;Parent=gene-AL60_RS14890;Dbxref=GenBank:WP_003916215.1;Name=WP_003916215.1;gbkey=CDS;gene=fadD10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916215.1;locus_tag=AL60_RS14890;product=fatty acid--CoA ligase FadD10;protein_id=WP_003916215.1;transl_table=11 NZ_KK316850.1 RefSeq gene 109815 110051 . + . ID=gene-AL60_RS14895;Name=AL60_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14895;old_locus_tag=AL60_01889 NZ_KK316850.1 Protein Homology CDS 109815 110051 . + 0 ID=cds-WP_003400793.1;Parent=gene-AL60_RS14895;Dbxref=GenBank:WP_003400793.1;Name=WP_003400793.1;Ontology_term=GO:0006633,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214614.1;locus_tag=AL60_RS14895;product=acyl carrier protein;protein_id=WP_003400793.1;transl_table=11 NZ_KK316850.1 RefSeq gene 110033 117571 . + . ID=gene-AL60_RS14900;Name=nrp;gbkey=Gene;gene=nrp;gene_biotype=protein_coding;locus_tag=AL60_RS14900;old_locus_tag=AL60_01890 NZ_KK316850.1 Protein Homology CDS 110033 117571 . + 0 ID=cds-WP_011961622.1;Parent=gene-AL60_RS14900;Dbxref=GenBank:WP_011961622.1;Name=WP_011961622.1;Ontology_term=GO:1904091;gbkey=CDS;gene=nrp;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214615.1;locus_tag=AL60_RS14900;product=non-ribosomal peptide synthetase Nrp;protein_id=WP_011961622.1;transl_table=11 NZ_KK316850.1 RefSeq gene 117746 119731 . + . ID=gene-AL60_RS14905;Name=AL60_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14905;old_locus_tag=AL60_01891 NZ_KK316850.1 Protein Homology CDS 117746 119731 . + 0 ID=cds-WP_003900808.1;Parent=gene-AL60_RS14905;Dbxref=GenBank:WP_003900808.1;Name=WP_003900808.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214616.1;locus_tag=AL60_RS14905;product=cytochrome c oxidase assembly protein;protein_id=WP_003900808.1;transl_table=11 NZ_KK316850.1 RefSeq gene 119947 122205 . - . ID=gene-AL60_RS14910;Name=ctpB;gbkey=Gene;gene=ctpB;gene_biotype=protein_coding;locus_tag=AL60_RS14910;old_locus_tag=AL60_01892 NZ_KK316850.1 Protein Homology CDS 119947 122205 . - 0 ID=cds-WP_003400797.1;Parent=gene-AL60_RS14910;Dbxref=GenBank:WP_003400797.1;Name=WP_003400797.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=ctpB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214617.1;locus_tag=AL60_RS14910;product=heavy metal translocating P-type ATPase;protein_id=WP_003400797.1;transl_table=11 NZ_KK316850.1 RefSeq gene 122349 123863 . + . ID=gene-AL60_RS14915;Name=AL60_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14915;old_locus_tag=AL60_01893 NZ_KK316850.1 Protein Homology CDS 122349 123863 . + 0 ID=cds-WP_003899813.1;Parent=gene-AL60_RS14915;Dbxref=GenBank:WP_003899813.1;Name=WP_003899813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214618.1;locus_tag=AL60_RS14915;product=cyclic nucleotide-binding domain-containing protein;protein_id=WP_003899813.1;transl_table=11 NZ_KK316850.1 RefSeq pseudogene 123897 124002 . - . ID=gene-AL60_RS26850;Name=AL60_RS26850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26850;partial=true;pseudo=true;start_range=.,123897 NZ_KK316850.1 Protein Homology CDS 123897 124002 . - 0 ID=cds-AL60_RS26850;Parent=gene-AL60_RS26850;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005063154.1;locus_tag=AL60_RS26850;partial=true;product=50S ribosomal protein L33;pseudo=true;start_range=.,123897;transl_table=11 NZ_KK316850.1 RefSeq gene 124012 124296 . - . ID=gene-AL60_RS14920;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AL60_RS14920;old_locus_tag=AL60_01894 NZ_KK316850.1 Protein Homology CDS 124012 124296 . - 0 ID=cds-WP_003400802.1;Parent=gene-AL60_RS14920;Dbxref=GenBank:WP_003400802.1;Name=WP_003400802.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177691.1;locus_tag=AL60_RS14920;product=50S ribosomal protein L28;protein_id=WP_003400802.1;transl_table=11 NZ_KK316850.1 RefSeq gene 124406 125602 . + . ID=gene-AL60_RS14925;Name=mrf;gbkey=Gene;gene=mrf;gene_biotype=protein_coding;locus_tag=AL60_RS14925;old_locus_tag=AL60_01895 NZ_KK316850.1 Protein Homology CDS 124406 125602 . + 0 ID=cds-WP_003400804.1;Parent=gene-AL60_RS14925;Dbxref=GenBank:WP_003400804.1;Name=WP_003400804.1;gbkey=CDS;gene=mrf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214620.1;locus_tag=AL60_RS14925;product=ribosome hibernation factor-recruiting GTPase MRF;protein_id=WP_003400804.1;transl_table=11 NZ_KK316850.1 RefSeq gene 125697 130574 . - . ID=gene-AL60_RS14930;Name=ctpI;gbkey=Gene;gene=ctpI;gene_biotype=protein_coding;locus_tag=AL60_RS14930;old_locus_tag=AL60_01896 NZ_KK316850.1 Protein Homology CDS 125697 130574 . - 0 ID=cds-WP_003899815.1;Parent=gene-AL60_RS14930;Dbxref=GenBank:WP_003899815.1;Name=WP_003899815.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;gene=ctpI;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400807.1;locus_tag=AL60_RS14930;product=cation-translocating P-type ATPase;protein_id=WP_003899815.1;transl_table=11 NZ_KK316850.1 RefSeq gene 130928 131161 . - . ID=gene-AL60_RS14935;Name=AL60_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14935;old_locus_tag=AL60_01897 NZ_KK316850.1 Protein Homology CDS 130928 131161 . - 0 ID=cds-WP_003899816.1;Parent=gene-AL60_RS14935;Dbxref=GenBank:WP_003899816.1;Name=WP_003899816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015354093.1;locus_tag=AL60_RS14935;product=hypothetical protein;protein_id=WP_003899816.1;transl_table=11 NZ_KK316850.1 RefSeq gene 131416 132906 . + . ID=gene-AL60_RS14940;Name=AL60_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14940;old_locus_tag=AL60_01898 NZ_KK316850.1 Protein Homology CDS 131416 132906 . + 0 ID=cds-WP_003909149.1;Parent=gene-AL60_RS14940;Dbxref=GenBank:WP_003909149.1;Name=WP_003909149.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177692.1;locus_tag=AL60_RS14940;product=PE family protein;protein_id=WP_003909149.1;transl_table=11 NZ_KK316850.1 RefSeq gene 132949 133803 . + . ID=gene-AL60_RS14945;Name=AL60_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14945;old_locus_tag=AL60_01899 NZ_KK316850.1 Protein Homology CDS 132949 133803 . + 0 ID=cds-WP_003899818.1;Parent=gene-AL60_RS14945;Dbxref=GenBank:WP_003899818.1;Name=WP_003899818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899818.1;locus_tag=AL60_RS14945;product=rhomboid family intramembrane serine protease;protein_id=WP_003899818.1;transl_table=11 NZ_KK316850.1 RefSeq gene 133984 136041 . + . ID=gene-AL60_RS14950;Name=AL60_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14950;old_locus_tag=AL60_01900 NZ_KK316850.1 Protein Homology CDS 133984 136041 . + 0 ID=cds-WP_003900811.1;Parent=gene-AL60_RS14950;Dbxref=GenBank:WP_003900811.1;Name=WP_003900811.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214625.1;locus_tag=AL60_RS14950;product=acyltransferase family protein;protein_id=WP_003900811.1;transl_table=11 NZ_KK316850.1 RefSeq gene 136323 137279 . + . ID=gene-AL60_RS14955;Name=gca;gbkey=Gene;gene=gca;gene_biotype=protein_coding;locus_tag=AL60_RS14955;old_locus_tag=AL60_01901 NZ_KK316850.1 Protein Homology CDS 136323 137279 . + 0 ID=cds-WP_003400829.1;Parent=gene-AL60_RS14955;Dbxref=GenBank:WP_003400829.1;Name=WP_003400829.1;gbkey=CDS;gene=gca;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214626.1;locus_tag=AL60_RS14955;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_003400829.1;transl_table=11 NZ_KK316850.1 RefSeq gene 137353 137943 . + . ID=gene-AL60_RS14960;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=AL60_RS14960;old_locus_tag=AL60_01902 NZ_KK316850.1 Protein Homology CDS 137353 137943 . + 0 ID=cds-WP_003400839.1;Parent=gene-AL60_RS14960;Dbxref=GenBank:WP_003400839.1;Name=WP_003400839.1;gbkey=CDS;gene=gmhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214627.1;locus_tag=AL60_RS14960;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_003400839.1;transl_table=11 NZ_KK316850.1 RefSeq gene 137975 138547 . + . ID=gene-AL60_RS14965;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=AL60_RS14965;old_locus_tag=AL60_01903 NZ_KK316850.1 Protein Homology CDS 137975 138547 . + 0 ID=cds-WP_003400840.1;Parent=gene-AL60_RS14965;Dbxref=GenBank:WP_003400840.1;Name=WP_003400840.1;gbkey=CDS;gene=gmhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214628.1;locus_tag=AL60_RS14965;product=D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_003400840.1;transl_table=11 NZ_KK316850.1 RefSeq gene 138547 139707 . + . ID=gene-AL60_RS14970;Name=hddA;gbkey=Gene;gene=hddA;gene_biotype=protein_coding;locus_tag=AL60_RS14970;old_locus_tag=AL60_01904 NZ_KK316850.1 Protein Homology CDS 138547 139707 . + 0 ID=cds-WP_003899819.1;Parent=gene-AL60_RS14970;Dbxref=GenBank:WP_003899819.1;Name=WP_003899819.1;gbkey=CDS;gene=hddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214629.1;locus_tag=AL60_RS14970;product=D-alpha-D-heptose-7-phosphate kinase HddA;protein_id=WP_003899819.1;transl_table=11 NZ_KK316850.1 RefSeq gene 139990 140178 . + . ID=gene-AL60_RS0104730;Name=AL60_RS0104730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104730 NZ_KK316850.1 Protein Homology CDS 139990 140178 . + 0 ID=cds-WP_003400850.1;Parent=gene-AL60_RS0104730;Dbxref=GenBank:WP_003400850.1;Name=WP_003400850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030027.1;locus_tag=AL60_RS0104730;product=hypothetical protein;protein_id=WP_003400850.1;transl_table=11 NZ_KK316850.1 RefSeq gene 140301 141056 . - . ID=gene-AL60_RS14975;Name=ldtMt1;gbkey=Gene;gene=ldtMt1;gene_biotype=protein_coding;locus_tag=AL60_RS14975;old_locus_tag=AL60_01905 NZ_KK316850.1 Protein Homology CDS 140301 141056 . - 0 ID=cds-WP_003400856.1;Parent=gene-AL60_RS14975;Dbxref=GenBank:WP_003400856.1;Name=WP_003400856.1;gbkey=CDS;gene=ldtMt1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214630.1;locus_tag=AL60_RS14975;product=L%2CD-transpeptidase LdtMt1;protein_id=WP_003400856.1;transl_table=11 NZ_KK316850.1 RefSeq gene 141234 142178 . + . ID=gene-AL60_RS14980;Name=oxyS;gbkey=Gene;gene=oxyS;gene_biotype=protein_coding;locus_tag=AL60_RS14980;old_locus_tag=AL60_01906 NZ_KK316850.1 Protein Homology CDS 141234 142178 . + 0 ID=cds-WP_003400857.1;Parent=gene-AL60_RS14980;Dbxref=GenBank:WP_003400857.1;Name=WP_003400857.1;gbkey=CDS;gene=oxyS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214631.1;locus_tag=AL60_RS14980;product=LysR family transcriptional regulator OxyS;protein_id=WP_003400857.1;transl_table=11 NZ_KK316850.1 RefSeq gene 142162 143910 . - . ID=gene-AL60_RS14985;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;locus_tag=AL60_RS14985;old_locus_tag=AL60_01907 NZ_KK316850.1 Protein Homology CDS 142162 143910 . - 0 ID=cds-WP_003900812.1;Parent=gene-AL60_RS14985;Dbxref=GenBank:WP_003900812.1;Name=WP_003900812.1;Ontology_term=GO:0033611,GO:0000287,GO:0008949,GO:0030976;gbkey=CDS;gene=oxc;go_function=magnesium ion binding|0000287||IEA,oxalyl-CoA decarboxylase activity|0008949||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214632.1;locus_tag=AL60_RS14985;product=oxalyl-CoA decarboxylase;protein_id=WP_003900812.1;transl_table=11 NZ_KK316850.1 RefSeq gene 144083 145660 . + . ID=gene-AL60_RS14990;Name=AL60_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14990;old_locus_tag=AL60_01908 NZ_KK316850.1 Protein Homology CDS 144083 145660 . + 0 ID=cds-WP_003901806.1;Parent=gene-AL60_RS14990;Dbxref=GenBank:WP_003901806.1;Name=WP_003901806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214633.1;locus_tag=AL60_RS14990;product=FadD7 family fatty acid--CoA ligase;protein_id=WP_003901806.1;transl_table=11 NZ_KK316850.1 RefSeq gene 145661 147805 . - . ID=gene-AL60_RS14995;Name=AL60_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS14995;old_locus_tag=AL60_01909 NZ_KK316850.1 Protein Homology CDS 145661 147805 . - 0 ID=cds-WP_003400860.1;Parent=gene-AL60_RS14995;Dbxref=GenBank:WP_003400860.1;Name=WP_003400860.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214634.1;locus_tag=AL60_RS14995;product=elongation factor G-like protein EF-G2;protein_id=WP_003400860.1;transl_table=11 NZ_KK316850.1 RefSeq gene 147942 148376 . - . ID=gene-AL60_RS15000;Name=AL60_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15000;old_locus_tag=AL60_01910 NZ_KK316850.1 Protein Homology CDS 147942 148376 . - 0 ID=cds-WP_003400864.1;Parent=gene-AL60_RS15000;Dbxref=GenBank:WP_003400864.1;Name=WP_003400864.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214635.1;locus_tag=AL60_RS15000;product=TIGR03668 family PPOX class F420-dependent oxidoreductase;protein_id=WP_003400864.1;transl_table=11 NZ_KK316850.1 RefSeq gene 148525 148893 . + . ID=gene-AL60_RS15005;Name=AL60_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15005;old_locus_tag=AL60_01911 NZ_KK316850.1 Protein Homology CDS 148525 148893 . + 0 ID=cds-WP_003400865.1;Parent=gene-AL60_RS15005;Dbxref=GenBank:WP_003400865.1;Name=WP_003400865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214636.1;locus_tag=AL60_RS15005;product=hypothetical protein;protein_id=WP_003400865.1;transl_table=11 NZ_KK316850.1 RefSeq gene 148890 149258 . + . ID=gene-AL60_RS15010;Name=AL60_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15010;old_locus_tag=AL60_01912 NZ_KK316850.1 Protein Homology CDS 148890 149258 . + 0 ID=cds-WP_003400878.1;Parent=gene-AL60_RS15010;Dbxref=GenBank:WP_003400878.1;Name=WP_003400878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214637.1;locus_tag=AL60_RS15010;product=hypothetical protein;protein_id=WP_003400878.1;transl_table=11 NZ_KK316850.1 RefSeq gene 149567 151210 . + . ID=gene-AL60_RS15015;Name=AL60_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15015;old_locus_tag=AL60_01913 NZ_KK316850.1 Protein Homology CDS 149567 151210 . + 0 ID=cds-WP_009937218.1;Parent=gene-AL60_RS15015;Dbxref=GenBank:WP_009937218.1;Name=WP_009937218.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288800.1;locus_tag=AL60_RS15015;product=PE family protein;protein_id=WP_009937218.1;transl_table=11 NZ_KK316850.1 RefSeq gene 151362 152429 . + . ID=gene-AL60_RS15020;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=AL60_RS15020;old_locus_tag=AL60_01914 NZ_KK316850.1 Protein Homology CDS 151362 152429 . + 0 ID=cds-WP_003400885.1;Parent=gene-AL60_RS15020;Dbxref=GenBank:WP_003400885.1;Name=WP_003400885.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=pepA;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214639.1;locus_tag=AL60_RS15020;product=S1C family serine protease;protein_id=WP_003400885.1;transl_table=11 NZ_KK316850.1 RefSeq gene 152538 154343 . + . ID=gene-AL60_RS15025;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=AL60_RS15025;old_locus_tag=AL60_01915 NZ_KK316850.1 Protein Homology CDS 152538 154343 . + 0 ID=cds-WP_003400893.1;Parent=gene-AL60_RS15025;Dbxref=GenBank:WP_003400893.1;Name=WP_003400893.1;Ontology_term=GO:0005991,GO:0047471;gbkey=CDS;gene=treS;go_function=maltose alpha-D-glucosyltransferase activity|0047471||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214640.1;locus_tag=AL60_RS15025;product=maltose alpha-D-glucosyltransferase;protein_id=WP_003400893.1;transl_table=11 NZ_KK316850.1 RefSeq gene 154446 155813 . + . ID=gene-AL60_RS15030;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=AL60_RS15030;old_locus_tag=AL60_01916 NZ_KK316850.1 Protein Homology CDS 154446 155813 . + 0 ID=cds-WP_003899824.1;Parent=gene-AL60_RS15030;Dbxref=GenBank:WP_003899824.1;Name=WP_003899824.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214641.1;locus_tag=AL60_RS15030;product=maltokinase;protein_id=WP_003899824.1;transl_table=11 NZ_KK316850.1 RefSeq gene 155881 156660 . + . ID=gene-AL60_RS15035;Name=AL60_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15035;old_locus_tag=AL60_01917 NZ_KK316850.1 Protein Homology CDS 155881 156660 . + 0 ID=cds-WP_003899825.1;Parent=gene-AL60_RS15035;Dbxref=GenBank:WP_003899825.1;Name=WP_003899825.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214642.1;locus_tag=AL60_RS15035;product=YoaK family protein;protein_id=WP_003899825.1;transl_table=11 NZ_KK316850.1 RefSeq gene 156792 157814 . - . ID=gene-AL60_RS15040;Name=ag85C;gbkey=Gene;gene=ag85C;gene_biotype=protein_coding;gene_synonym=fbpC;locus_tag=AL60_RS15040;old_locus_tag=AL60_01918 NZ_KK316850.1 Protein Homology CDS 156792 157814 . - 0 ID=cds-WP_003400908.1;Parent=gene-AL60_RS15040;Dbxref=GenBank:WP_003400908.1;Name=WP_003400908.1;gbkey=CDS;gene=ag85C;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177694.1;locus_tag=AL60_RS15040;product=diacylglycerol acyltransferase/mycolyltransferase Ag85C;protein_id=WP_003400908.1;transl_table=11 NZ_KK316850.1 RefSeq gene 158061 158516 . + . ID=gene-AL60_RS15045;Name=htdZ;gbkey=Gene;gene=htdZ;gene_biotype=protein_coding;locus_tag=AL60_RS15045;old_locus_tag=AL60_01919 NZ_KK316850.1 Protein Homology CDS 158061 158516 . + 0 ID=cds-WP_003400912.1;Parent=gene-AL60_RS15045;Dbxref=GenBank:WP_003400912.1;Name=WP_003400912.1;gbkey=CDS;gene=htdZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214644.1;locus_tag=AL60_RS15045;product=3-hydroxyacyl-thioester dehydratase HtdZ;protein_id=WP_003400912.1;transl_table=11 NZ_KK316850.1 RefSeq gene 158529 159872 . - . ID=gene-AL60_RS15050;Name=AL60_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15050;old_locus_tag=AL60_01920 NZ_KK316850.1 Protein Homology CDS 158529 159872 . - 0 ID=cds-WP_003400917.1;Parent=gene-AL60_RS15050;Dbxref=GenBank:WP_003400917.1;Name=WP_003400917.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020731414.1;locus_tag=AL60_RS15050;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003400917.1;transl_table=11 NZ_KK316850.1 RefSeq gene 159914 160996 . - . ID=gene-AL60_RS15055;Name=AL60_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15055;old_locus_tag=AL60_01921 NZ_KK316850.1 Protein Homology CDS 159914 160996 . - 0 ID=cds-WP_003899826.1;Parent=gene-AL60_RS15055;Dbxref=GenBank:WP_003899826.1;Name=WP_003899826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214646.1;locus_tag=AL60_RS15055;product=F420-dependent hydroxymycolic acid dehydrogenase;protein_id=WP_003899826.1;transl_table=11 NZ_KK316850.1 RefSeq gene 161083 161688 . + . ID=gene-AL60_RS15060;Name=AL60_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15060;old_locus_tag=AL60_01922 NZ_KK316850.1 Protein Homology CDS 161083 161688 . + 0 ID=cds-WP_003400924.1;Parent=gene-AL60_RS15060;Dbxref=GenBank:WP_003400924.1;Name=WP_003400924.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214647.1;locus_tag=AL60_RS15060;product=GNAT family N-acetyltransferase;protein_id=WP_003400924.1;transl_table=11 NZ_KK316850.1 RefSeq gene 161985 162887 . + . ID=gene-AL60_RS15065;Name=ephF;gbkey=Gene;gene=ephF;gene_biotype=protein_coding;locus_tag=AL60_RS15065;old_locus_tag=AL60_01923 NZ_KK316850.1 Protein Homology CDS 161985 162887 . + 0 ID=cds-WP_003907207.1;Parent=gene-AL60_RS15065;Dbxref=GenBank:WP_003907207.1;Name=WP_003907207.1;gbkey=CDS;gene=ephF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214648.1;locus_tag=AL60_RS15065;product=alpha/beta fold hydrolase;protein_id=WP_003907207.1;transl_table=11 NZ_KK316850.1 RefSeq gene 162858 163463 . - . ID=gene-AL60_RS15070;Name=AL60_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15070;old_locus_tag=AL60_01924 NZ_KK316850.1 Protein Homology CDS 162858 163463 . - 0 ID=cds-WP_003400935.1;Parent=gene-AL60_RS15070;Dbxref=GenBank:WP_003400935.1;Name=WP_003400935.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214649.1;locus_tag=AL60_RS15070;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003400935.1;transl_table=11 NZ_KK316850.1 RefSeq gene 163580 164905 . + . ID=gene-AL60_RS15075;Name=AL60_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15075;old_locus_tag=AL60_01925 NZ_KK316850.1 Protein Homology CDS 163580 164905 . + 0 ID=cds-WP_003400938.1;Parent=gene-AL60_RS15075;Dbxref=GenBank:WP_003400938.1;Name=WP_003400938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214650.1;locus_tag=AL60_RS15075;product=cytochrome P450;protein_id=WP_003400938.1;transl_table=11 NZ_KK316850.1 RefSeq gene 164926 165474 . - . ID=gene-AL60_RS15080;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=AL60_RS15080;old_locus_tag=AL60_01926 NZ_KK316850.1 Protein Homology CDS 164926 165474 . - 0 ID=cds-WP_003400942.1;Parent=gene-AL60_RS15080;Dbxref=GenBank:WP_003400942.1;Name=WP_003400942.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214651.1;locus_tag=AL60_RS15080;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_003400942.1;transl_table=11 NZ_KK316850.1 RefSeq gene 165537 166040 . + . ID=gene-AL60_RS15085;Name=AL60_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15085;old_locus_tag=AL60_01927 NZ_KK316850.1 Protein Homology CDS 165537 166040 . + 0 ID=cds-WP_011961625.1;Parent=gene-AL60_RS15085;Dbxref=GenBank:WP_011961625.1;Name=WP_011961625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214652.1;locus_tag=AL60_RS15085;product=nuclear transport factor 2 family protein;protein_id=WP_011961625.1;transl_table=11 NZ_KK316850.1 RefSeq gene 166041 167063 . + . ID=gene-AL60_RS15090;Name=AL60_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15090;old_locus_tag=AL60_01928 NZ_KK316850.1 Protein Homology CDS 166041 167063 . + 0 ID=cds-WP_003400947.1;Parent=gene-AL60_RS15090;Dbxref=GenBank:WP_003400947.1;Name=WP_003400947.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214653.1;locus_tag=AL60_RS15090;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003400947.1;transl_table=11 NZ_KK316850.1 RefSeq gene 167124 167504 . + . ID=gene-AL60_RS15095;Name=AL60_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15095;old_locus_tag=AL60_01929 NZ_KK316850.1 Protein Homology CDS 167124 167504 . + 0 ID=cds-WP_003400949.1;Parent=gene-AL60_RS15095;Dbxref=GenBank:WP_003400949.1;Name=WP_003400949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214654.1;locus_tag=AL60_RS15095;product=DUF427 domain-containing protein;protein_id=WP_003400949.1;transl_table=11 NZ_KK316850.1 RefSeq gene 167485 167895 . - . ID=gene-AL60_RS15100;Name=AL60_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15100;old_locus_tag=AL60_01930 NZ_KK316850.1 Protein Homology CDS 167485 167895 . - 0 ID=cds-WP_003400951.1;Parent=gene-AL60_RS15100;Dbxref=GenBank:WP_003400951.1;Name=WP_003400951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214655.1;locus_tag=AL60_RS15100;product=nuclear transport factor 2 family protein;protein_id=WP_003400951.1;transl_table=11 NZ_KK316850.1 RefSeq gene 167925 168851 . + . ID=gene-AL60_RS15105;Name=AL60_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15105;old_locus_tag=AL60_01931 NZ_KK316850.1 Protein Homology CDS 167925 168851 . + 0 ID=cds-WP_003400956.1;Parent=gene-AL60_RS15105;Dbxref=GenBank:WP_003400956.1;Name=WP_003400956.1;Ontology_term=GO:0006281,GO:0019104,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214656.1;locus_tag=AL60_RS15105;product=DNA-3-methyladenine glycosylase family protein;protein_id=WP_003400956.1;transl_table=11 NZ_KK316850.1 RefSeq gene 168918 170396 . - . ID=gene-AL60_RS15110;Name=AL60_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15110;old_locus_tag=AL60_01932 NZ_KK316850.1 Protein Homology CDS 168918 170396 . - 0 ID=cds-WP_003899828.1;Parent=gene-AL60_RS15110;Dbxref=GenBank:WP_003899828.1;Name=WP_003899828.1;Ontology_term=GO:0005247,GO:0034707;gbkey=CDS;go_component=chloride channel complex|0034707||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214657.1;locus_tag=AL60_RS15110;product=chloride channel protein;protein_id=WP_003899828.1;transl_table=11 NZ_KK316850.1 RefSeq gene 170705 171340 . + . ID=gene-AL60_RS0104735;Name=AL60_RS0104735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104735;old_locus_tag=AL60_01933 NZ_KK316850.1 Protein Homology CDS 170705 171340 . + 0 ID=cds-WP_003911117.1;Parent=gene-AL60_RS0104735;Dbxref=GenBank:WP_003911117.1;Name=WP_003911117.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911117.1;locus_tag=AL60_RS0104735;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003911117.1;transl_table=11 NZ_KK316850.1 RefSeq gene 171429 172382 . + . ID=gene-AL60_RS15115;Name=AL60_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15115;old_locus_tag=AL60_01934 NZ_KK316850.1 Protein Homology CDS 171429 172382 . + 0 ID=cds-WP_003899829.1;Parent=gene-AL60_RS15115;Dbxref=GenBank:WP_003899829.1;Name=WP_003899829.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214659.1;locus_tag=AL60_RS15115;product=class I SAM-dependent methyltransferase;protein_id=WP_003899829.1;transl_table=11 NZ_KK316850.1 RefSeq gene 172425 173357 . + . ID=gene-AL60_RS15120;Name=AL60_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15120;old_locus_tag=AL60_01935 NZ_KK316850.1 Protein Homology CDS 172425 173357 . + 0 ID=cds-WP_003900814.1;Parent=gene-AL60_RS15120;Dbxref=GenBank:WP_003900814.1;Name=WP_003900814.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214660.1;locus_tag=AL60_RS15120;product=class I SAM-dependent methyltransferase;protein_id=WP_003900814.1;transl_table=11 NZ_KK316850.1 RefSeq gene 173497 174972 . + . ID=gene-AL60_RS15125;Name=AL60_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15125;old_locus_tag=AL60_01936 NZ_KK316850.1 Protein Homology CDS 173497 174972 . + 0 ID=cds-WP_003913557.1;Parent=gene-AL60_RS15125;Dbxref=GenBank:WP_003913557.1;Name=WP_003913557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016705823.1;locus_tag=AL60_RS15125;product=aldehyde dehydrogenase family protein;protein_id=WP_003913557.1;transl_table=11 NZ_KK316850.1 RefSeq gene 175047 175907 . + . ID=gene-AL60_RS15130;Name=AL60_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15130;old_locus_tag=AL60_01937 NZ_KK316850.1 Protein Homology CDS 175047 175907 . + 0 ID=cds-WP_003400979.1;Parent=gene-AL60_RS15130;Dbxref=GenBank:WP_003400979.1;Name=WP_003400979.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214662.1;locus_tag=AL60_RS15130;product=SDR family oxidoreductase;protein_id=WP_003400979.1;transl_table=11 NZ_KK316850.1 RefSeq gene 175914 176882 . + . ID=gene-AL60_RS15135;Name=AL60_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15135;old_locus_tag=AL60_01938 NZ_KK316850.1 Protein Homology CDS 175914 176882 . + 0 ID=cds-WP_003400985.1;Parent=gene-AL60_RS15135;Dbxref=GenBank:WP_003400985.1;Name=WP_003400985.1;Ontology_term=GO:0016491,GO:0016655,GO:0048038,GO:0070402;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214663.1;locus_tag=AL60_RS15135;product=NADPH:quinone oxidoreductase family protein;protein_id=WP_003400985.1;transl_table=11 NZ_KK316850.1 RefSeq gene 176879 177166 . - . ID=gene-AL60_RS15140;Name=AL60_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15140;old_locus_tag=AL60_01939 NZ_KK316850.1 Protein Homology CDS 176879 177166 . - 0 ID=cds-WP_003400989.1;Parent=gene-AL60_RS15140;Dbxref=GenBank:WP_003400989.1;Name=WP_003400989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214664.1;locus_tag=AL60_RS15140;product=hypothetical protein;protein_id=WP_003400989.1;transl_table=11 NZ_KK316850.1 RefSeq gene 177757 179439 . - . ID=gene-AL60_RS15145;Name=AL60_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15145;old_locus_tag=AL60_01940 NZ_KK316850.1 Protein Homology CDS 177757 179439 . - 0 ID=cds-WP_003911119.1;Parent=gene-AL60_RS15145;Dbxref=GenBank:WP_003911119.1;Name=WP_003911119.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912517.1;locus_tag=AL60_RS15145;product=PE family protein;protein_id=WP_003911119.1;transl_table=11 NZ_KK316850.1 RefSeq pseudogene 179589 181243 . - . ID=gene-AL60_RS15150;Name=AL60_RS15150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS15150;old_locus_tag=AL60_01941;pseudo=true NZ_KK316850.1 Protein Homology CDS 179589 181243 . - 0 ID=cds-AL60_RS15150;Parent=gene-AL60_RS15150;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020730540.1;locus_tag=AL60_RS15150;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316850.1 RefSeq gene 181369 182199 . - . ID=gene-AL60_RS15155;Name=ptbB;gbkey=Gene;gene=ptbB;gene_biotype=protein_coding;locus_tag=AL60_RS15155;old_locus_tag=AL60_01942 NZ_KK316850.1 Protein Homology CDS 181369 182199 . - 0 ID=cds-WP_003401010.1;Parent=gene-AL60_RS15155;Dbxref=GenBank:WP_003401010.1;Name=WP_003401010.1;gbkey=CDS;gene=ptbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214667.1;locus_tag=AL60_RS15155;product=tyrosine-protein phosphatase PtbB;protein_id=WP_003401010.1;transl_table=11 NZ_KK316850.1 RefSeq gene 182201 183412 . - . ID=gene-AL60_RS15160;Name=AL60_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15160;old_locus_tag=AL60_01943 NZ_KK316850.1 Protein Homology CDS 182201 183412 . - 0 ID=cds-WP_003401015.1;Parent=gene-AL60_RS15160;Dbxref=GenBank:WP_003401015.1;Name=WP_003401015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214668.1;locus_tag=AL60_RS15160;product=acyl-CoA dehydrogenase;protein_id=WP_003401015.1;transl_table=11 NZ_KK316850.1 RefSeq pseudogene 183529 183775 . + . ID=gene-AL60_RS25935;Name=AL60_RS25935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS25935;partial=true;pseudo=true;start_range=.,183529 NZ_KK316850.1 Protein Homology CDS 183529 183775 . + 0 ID=cds-AL60_RS25935;Parent=gene-AL60_RS25935;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009956636.1;locus_tag=AL60_RS25935;partial=true;product=DUF1348 family protein;pseudo=true;start_range=.,183529;transl_table=11 NZ_KK316850.1 RefSeq gene 183836 184936 . + . ID=gene-AL60_RS15165;Name=pntAa;gbkey=Gene;gene=pntAa;gene_biotype=protein_coding;locus_tag=AL60_RS15165;old_locus_tag=AL60_01944 NZ_KK316850.1 Protein Homology CDS 183836 184936 . + 0 ID=cds-WP_003401026.1;Parent=gene-AL60_RS15165;Dbxref=GenBank:WP_003401026.1;Name=WP_003401026.1;Ontology_term=GO:1902600;gbkey=CDS;gene=pntAa;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214669.1;locus_tag=AL60_RS15165;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_003401026.1;transl_table=11 NZ_KK316850.1 RefSeq gene 184937 185269 . + . ID=gene-AL60_RS15170;Name=pntAb;gbkey=Gene;gene=pntAb;gene_biotype=protein_coding;locus_tag=AL60_RS15170;old_locus_tag=AL60_01945 NZ_KK316850.1 Protein Homology CDS 184937 185269 . + 0 ID=cds-WP_003401030.1;Parent=gene-AL60_RS15170;Dbxref=GenBank:WP_003401030.1;Name=WP_003401030.1;gbkey=CDS;gene=pntAb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214670.1;locus_tag=AL60_RS15170;product=NAD(P) transhydrogenase subunit alpha part 2;protein_id=WP_003401030.1;transl_table=11 NZ_KK316850.1 RefSeq gene 185266 186693 . + . ID=gene-AL60_RS15175;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AL60_RS15175;old_locus_tag=AL60_01946 NZ_KK316850.1 Protein Homology CDS 185266 186693 . + 0 ID=cds-WP_003899835.1;Parent=gene-AL60_RS15175;Dbxref=GenBank:WP_003899835.1;Name=WP_003899835.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214671.1;locus_tag=AL60_RS15175;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta;protein_id=WP_003899835.1;transl_table=11 NZ_KK316850.1 RefSeq gene 186709 186837 . - . ID=gene-AL60_RS15180;Name=AL60_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15180;old_locus_tag=AL60_01947 NZ_KK316850.1 Protein Homology CDS 186709 186837 . - 0 ID=cds-WP_003910049.1;Parent=gene-AL60_RS15180;Dbxref=GenBank:WP_003910049.1;Name=WP_003910049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408797.1;locus_tag=AL60_RS15180;product=hypothetical protein;protein_id=WP_003910049.1;transl_table=11 NZ_KK316850.1 RefSeq gene 186999 187643 . + . ID=gene-AL60_RS15185;Name=AL60_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15185;old_locus_tag=AL60_01948 NZ_KK316850.1 Protein Homology CDS 186999 187643 . + 0 ID=cds-WP_003401044.1;Parent=gene-AL60_RS15185;Dbxref=GenBank:WP_003401044.1;Name=WP_003401044.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214672.1;locus_tag=AL60_RS15185;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401044.1;transl_table=11 NZ_KK316850.1 RefSeq gene 187647 189053 . - . ID=gene-AL60_RS15190;Name=AL60_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15190;old_locus_tag=AL60_01949 NZ_KK316850.1 Protein Homology CDS 187647 189053 . - 0 ID=cds-WP_003401047.1;Parent=gene-AL60_RS15190;Dbxref=GenBank:WP_003401047.1;Name=WP_003401047.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177697.1;locus_tag=AL60_RS15190;product=PE family protein;protein_id=WP_003401047.1;transl_table=11 NZ_KK316850.1 RefSeq gene 189145 190653 . - . ID=gene-AL60_RS15195;Name=AL60_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15195;old_locus_tag=AL60_01950 NZ_KK316850.1 Protein Homology CDS 189145 190653 . - 0 ID=cds-WP_003900817.1;Parent=gene-AL60_RS15195;Dbxref=GenBank:WP_003900817.1;Name=WP_003900817.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177698.1;locus_tag=AL60_RS15195;product=PE family protein;protein_id=WP_003900817.1;transl_table=11 NZ_KK316850.1 RefSeq gene 190821 192170 . + . ID=gene-AL60_RS15200;Name=AL60_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15200;old_locus_tag=AL60_01951 NZ_KK316850.1 Protein Homology CDS 190821 192170 . + 0 ID=cds-WP_003401056.1;Parent=gene-AL60_RS15200;Dbxref=GenBank:WP_003401056.1;Name=WP_003401056.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214675.1;locus_tag=AL60_RS15200;product=FAD-binding oxidoreductase;protein_id=WP_003401056.1;transl_table=11 NZ_KK316850.1 RefSeq gene 192198 193316 . - . ID=gene-AL60_RS15205;Name=AL60_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15205;old_locus_tag=AL60_01952 NZ_KK316850.1 Protein Homology CDS 192198 193316 . - 0 ID=cds-WP_003901814.1;Parent=gene-AL60_RS15205;Dbxref=GenBank:WP_003901814.1;Name=WP_003901814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914562.1;locus_tag=AL60_RS15205;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_003901814.1;transl_table=11 NZ_KK316850.1 RefSeq gene 193331 193786 . + . ID=gene-AL60_RS15210;Name=AL60_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15210;old_locus_tag=AL60_01953 NZ_KK316850.1 Protein Homology CDS 193331 193786 . + 0 ID=cds-WP_003401060.1;Parent=gene-AL60_RS15210;Dbxref=GenBank:WP_003401060.1;Name=WP_003401060.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214677.1;locus_tag=AL60_RS15210;product=acyl-CoA thioesterase;protein_id=WP_003401060.1;transl_table=11 NZ_KK316850.1 RefSeq gene 193885 194325 . + . ID=gene-AL60_RS15215;Name=AL60_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15215;old_locus_tag=AL60_01954 NZ_KK316850.1 Protein Homology CDS 193885 194325 . + 0 ID=cds-WP_003917895.1;Parent=gene-AL60_RS15215;Dbxref=GenBank:WP_003917895.1;Name=WP_003917895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874167.1;locus_tag=AL60_RS15215;product=SRPBCC family protein;protein_id=WP_003917895.1;transl_table=11 NZ_KK316850.1 RefSeq pseudogene 194339 195029 . - . ID=gene-AL60_RS15220;Name=AL60_RS15220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS15220;old_locus_tag=AL60_01955;pseudo=true NZ_KK316850.1 Protein Homology CDS 194339 195029 . - 0 ID=cds-AL60_RS15220;Parent=gene-AL60_RS15220;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401065.1;locus_tag=AL60_RS15220;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 NZ_KK316850.1 RefSeq gene 195207 196871 . + . ID=gene-AL60_RS15225;Name=fadD5;gbkey=Gene;gene=fadD5;gene_biotype=protein_coding;locus_tag=AL60_RS15225;old_locus_tag=AL60_01956 NZ_KK316850.1 Protein Homology CDS 195207 196871 . + 0 ID=cds-WP_003899837.1;Parent=gene-AL60_RS15225;Dbxref=GenBank:WP_003899837.1;Name=WP_003899837.1;gbkey=CDS;gene=fadD5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214680.1;locus_tag=AL60_RS15225;product=fatty-acid--CoA ligase FadD5;protein_id=WP_003899837.1;transl_table=11 NZ_KK316850.1 RefSeq gene 197075 197872 . + . ID=gene-AL60_RS15230;Name=AL60_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15230;old_locus_tag=AL60_01957 NZ_KK316850.1 Protein Homology CDS 197075 197872 . + 0 ID=cds-WP_003401074.1;Parent=gene-AL60_RS15230;Dbxref=GenBank:WP_003401074.1;Name=WP_003401074.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214681.1;locus_tag=AL60_RS15230;product=MlaE family ABC transporter permease;protein_id=WP_003401074.1;transl_table=11 NZ_KK316850.1 RefSeq gene 197874 198743 . + . ID=gene-AL60_RS15235;Name=AL60_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15235;old_locus_tag=AL60_01958 NZ_KK316850.1 Protein Homology CDS 197874 198743 . + 0 ID=cds-WP_003401077.1;Parent=gene-AL60_RS15235;Dbxref=GenBank:WP_003401077.1;Name=WP_003401077.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214682.1;locus_tag=AL60_RS15235;product=MlaE family ABC transporter permease;protein_id=WP_003401077.1;transl_table=11 NZ_KK316850.1 RefSeq gene 198748 200112 . + . ID=gene-AL60_RS15240;Name=AL60_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15240;old_locus_tag=AL60_01959 NZ_KK316850.1 Protein Homology CDS 198748 200112 . + 0 ID=cds-WP_003899838.1;Parent=gene-AL60_RS15240;Dbxref=GenBank:WP_003899838.1;Name=WP_003899838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177701.1;locus_tag=AL60_RS15240;product=MCE family protein;protein_id=WP_003899838.1;transl_table=11 NZ_KK316850.1 RefSeq gene 200109 201149 . + . ID=gene-AL60_RS15245;Name=AL60_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15245;old_locus_tag=AL60_01960 NZ_KK316850.1 Protein Homology CDS 200109 201149 . + 0 ID=cds-WP_003899839.1;Parent=gene-AL60_RS15245;Dbxref=GenBank:WP_003899839.1;Name=WP_003899839.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214684.1;locus_tag=AL60_RS15245;product=virulence factor Mce family protein;protein_id=WP_003899839.1;transl_table=11 NZ_KK316850.1 RefSeq gene 201146 202693 . + . ID=gene-AL60_RS15250;Name=AL60_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15250;old_locus_tag=AL60_01961 NZ_KK316850.1 Protein Homology CDS 201146 202693 . + 0 ID=cds-WP_003901818.1;Parent=gene-AL60_RS15250;Dbxref=GenBank:WP_003901818.1;Name=WP_003901818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214685.1;locus_tag=AL60_RS15250;product=virulence factor Mce family protein;protein_id=WP_003901818.1;transl_table=11 NZ_KK316850.1 RefSeq gene 202690 204282 . + . ID=gene-AL60_RS15255;Name=AL60_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15255;old_locus_tag=AL60_01962 NZ_KK316850.1 Protein Homology CDS 202690 204282 . + 0 ID=cds-WP_003907216.1;Parent=gene-AL60_RS15255;Dbxref=GenBank:WP_003907216.1;Name=WP_003907216.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214686.1;locus_tag=AL60_RS15255;product=virulence factor Mce family protein;protein_id=WP_003907216.1;transl_table=11 NZ_KK316850.1 RefSeq gene 204279 205451 . + . ID=gene-AL60_RS15260;Name=lprK;gbkey=Gene;gene=lprK;gene_biotype=protein_coding;locus_tag=AL60_RS15260;old_locus_tag=AL60_01963 NZ_KK316850.1 Protein Homology CDS 204279 205451 . + 0 ID=cds-WP_003899841.1;Parent=gene-AL60_RS15260;Dbxref=GenBank:WP_003899841.1;Name=WP_003899841.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=lprK;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214687.1;locus_tag=AL60_RS15260;product=virulence factor Mce family protein;protein_id=WP_003899841.1;transl_table=11 NZ_KK316850.1 RefSeq gene 205445 206992 . + . ID=gene-AL60_RS15265;Name=AL60_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15265;old_locus_tag=AL60_01964 NZ_KK316850.1 Protein Homology CDS 205445 206992 . + 0 ID=cds-WP_003401091.1;Parent=gene-AL60_RS15265;Dbxref=GenBank:WP_003401091.1;Name=WP_003401091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214688.1;locus_tag=AL60_RS15265;product=virulence factor Mce family protein;protein_id=WP_003401091.1;transl_table=11 NZ_KK316850.1 RefSeq gene 207028 207669 . + . ID=gene-AL60_RS15270;Name=AL60_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15270;old_locus_tag=AL60_01965 NZ_KK316850.1 Protein Homology CDS 207028 207669 . + 0 ID=cds-WP_003907217.1;Parent=gene-AL60_RS15270;Dbxref=GenBank:WP_003907217.1;Name=WP_003907217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214689.3;locus_tag=AL60_RS15270;product=hypothetical protein;protein_id=WP_003907217.1;transl_table=11 NZ_KK316850.1 RefSeq gene 207666 208634 . + . ID=gene-AL60_RS15275;Name=AL60_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15275;old_locus_tag=AL60_01966 NZ_KK316850.1 Protein Homology CDS 207666 208634 . + 0 ID=cds-WP_003899843.1;Parent=gene-AL60_RS15275;Dbxref=GenBank:WP_003899843.1;Name=WP_003899843.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214690.1;locus_tag=AL60_RS15275;product=RDD family protein;protein_id=WP_003899843.1;transl_table=11 NZ_KK316850.1 RefSeq gene 208631 209185 . + . ID=gene-AL60_RS15280;Name=AL60_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15280;old_locus_tag=AL60_01967 NZ_KK316850.1 Protein Homology CDS 208631 209185 . + 0 ID=cds-WP_003401099.1;Parent=gene-AL60_RS15280;Dbxref=GenBank:WP_003401099.1;Name=WP_003401099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401099.1;locus_tag=AL60_RS15280;product=mce1 operon protein;protein_id=WP_003401099.1;transl_table=11 NZ_KK316850.1 RefSeq gene 209152 209886 . + . ID=gene-AL60_RS15285;Name=AL60_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15285;old_locus_tag=AL60_01968 NZ_KK316850.1 Protein Homology CDS 209152 209886 . + 0 ID=cds-WP_003899844.1;Parent=gene-AL60_RS15285;Dbxref=GenBank:WP_003899844.1;Name=WP_003899844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214692.1;locus_tag=AL60_RS15285;product=Mce associated membrane protein;protein_id=WP_003899844.1;transl_table=11 NZ_KK316850.1 RefSeq gene 209917 211026 . - . ID=gene-AL60_RS15290;Name=lprO;gbkey=Gene;gene=lprO;gene_biotype=protein_coding;locus_tag=AL60_RS15290;old_locus_tag=AL60_01969 NZ_KK316850.1 Protein Homology CDS 209917 211026 . - 0 ID=cds-WP_003899845.1;Parent=gene-AL60_RS15290;Dbxref=GenBank:WP_003899845.1;Name=WP_003899845.1;gbkey=CDS;gene=lprO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214693.1;locus_tag=AL60_RS15290;product=phosphodiester glycosidase family protein;protein_id=WP_003899845.1;transl_table=11 NZ_KK316850.1 RefSeq gene 211106 212464 . - . ID=gene-AL60_RS15295;Name=AL60_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15295;old_locus_tag=AL60_01970 NZ_KK316850.1 Protein Homology CDS 211106 212464 . - 0 ID=cds-WP_003899846.1;Parent=gene-AL60_RS15295;Dbxref=GenBank:WP_003899846.1;Name=WP_003899846.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214694.1;locus_tag=AL60_RS15295;product=YhgE/Pip domain-containing protein;protein_id=WP_003899846.1;transl_table=11 NZ_KK316850.1 RefSeq gene 212491 213225 . - . ID=gene-AL60_RS15300;Name=AL60_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15300;old_locus_tag=AL60_01971 NZ_KK316850.1 Protein Homology CDS 212491 213225 . - 0 ID=cds-WP_003907219.1;Parent=gene-AL60_RS15300;Dbxref=GenBank:WP_003907219.1;Name=WP_003907219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214695.1;locus_tag=AL60_RS15300;product=pirin family protein;protein_id=WP_003907219.1;transl_table=11 NZ_KK316850.1 RefSeq gene 213242 214354 . - . ID=gene-AL60_RS15305;Name=sigG;gbkey=Gene;gene=sigG;gene_biotype=protein_coding;locus_tag=AL60_RS15305;old_locus_tag=AL60_01972 NZ_KK316850.1 Protein Homology CDS 213242 214354 . - 0 ID=cds-WP_078449477.1;Parent=gene-AL60_RS15305;Dbxref=GenBank:WP_078449477.1;Name=WP_078449477.1;gbkey=CDS;gene=sigG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214696.1;locus_tag=AL60_RS15305;product=sigma-70 family RNA polymerase sigma factor SigG;protein_id=WP_078449477.1;transl_table=11 NZ_KK316850.1 RefSeq gene 214302 215141 . + . ID=gene-AL60_RS15310;Name=AL60_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15310;old_locus_tag=AL60_01973 NZ_KK316850.1 Protein Homology CDS 214302 215141 . + 0 ID=cds-WP_003401112.1;Parent=gene-AL60_RS15310;Dbxref=GenBank:WP_003401112.1;Name=WP_003401112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214697.2;locus_tag=AL60_RS15310;product=monoacylglycerol lipase;protein_id=WP_003401112.1;transl_table=11 NZ_KK316850.1 RefSeq gene 215183 215932 . + . ID=gene-AL60_RS15315;Name=AL60_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15315;old_locus_tag=AL60_01974 NZ_KK316850.1 Protein Homology CDS 215183 215932 . + 0 ID=cds-WP_003401116.1;Parent=gene-AL60_RS15315;Dbxref=GenBank:WP_003401116.1;Name=WP_003401116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214698.1;locus_tag=AL60_RS15315;product=DUF2786 domain-containing protein;protein_id=WP_003401116.1;transl_table=11 NZ_KK316850.1 RefSeq gene 215929 216438 . + . ID=gene-AL60_RS15320;Name=AL60_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15320;old_locus_tag=AL60_01975 NZ_KK316850.1 Protein Homology CDS 215929 216438 . + 0 ID=cds-WP_003401120.1;Parent=gene-AL60_RS15320;Dbxref=GenBank:WP_003401120.1;Name=WP_003401120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214699.1;locus_tag=AL60_RS15320;product=TIGR04338 family metallohydrolase;protein_id=WP_003401120.1;transl_table=11 NZ_KK316850.1 RefSeq gene 216483 218558 . + . ID=gene-AL60_RS15325;Name=bglS;gbkey=Gene;gene=bglS;gene_biotype=protein_coding;locus_tag=AL60_RS15325;old_locus_tag=AL60_01976 NZ_KK316850.1 Protein Homology CDS 216483 218558 . + 0 ID=cds-WP_003401122.1;Parent=gene-AL60_RS15325;Dbxref=GenBank:WP_003401122.1;Name=WP_003401122.1;Ontology_term=GO:0030245,GO:0008422;gbkey=CDS;gene=bglS;go_function=beta-glucosidase activity|0008422||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012392408.1;locus_tag=AL60_RS15325;product=beta-glucosidase;protein_id=WP_003401122.1;transl_table=11 NZ_KK316850.1 RefSeq gene 218604 218765 . - . ID=gene-AL60_RS15330;Name=mymT;gbkey=Gene;gene=mymT;gene_biotype=protein_coding;locus_tag=AL60_RS15330;old_locus_tag=AL60_01977 NZ_KK316850.1 Protein Homology CDS 218604 218765 . - 0 ID=cds-WP_010886068.1;Parent=gene-AL60_RS15330;Dbxref=GenBank:WP_010886068.1;Name=WP_010886068.1;gbkey=CDS;gene=mymT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837046.2;locus_tag=AL60_RS15330;product=copper-binding metallothionein MymT;protein_id=WP_010886068.1;transl_table=11 NZ_KK316850.1 RefSeq gene 218919 219581 . + . ID=gene-AL60_RS15335;Name=AL60_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15335;old_locus_tag=AL60_01978 NZ_KK316850.1 Protein Homology CDS 218919 219581 . + 0 ID=cds-WP_003401129.1;Parent=gene-AL60_RS15335;Dbxref=GenBank:WP_003401129.1;Name=WP_003401129.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214701.1;locus_tag=AL60_RS15335;product=O-methyltransferase;protein_id=WP_003401129.1;transl_table=11 NZ_KK316850.1 RefSeq gene 219700 220131 . + . ID=gene-AL60_RS15340;Name=AL60_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15340;old_locus_tag=AL60_01979 NZ_KK316850.1 Protein Homology CDS 219700 220131 . + 0 ID=cds-WP_003401141.1;Parent=gene-AL60_RS15340;Dbxref=GenBank:WP_003401141.1;Name=WP_003401141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214702.1;locus_tag=AL60_RS15340;product=SPW repeat protein;protein_id=WP_003401141.1;transl_table=11 NZ_KK316850.1 RefSeq gene 220210 221937 . - . ID=gene-AL60_RS15345;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=AL60_RS15345;old_locus_tag=AL60_01980 NZ_KK316850.1 Protein Homology CDS 220210 221937 . - 0 ID=cds-WP_003900824.1;Parent=gene-AL60_RS15345;Dbxref=GenBank:WP_003900824.1;Name=WP_003900824.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214703.1;locus_tag=AL60_RS15345;product=dihydroxy-acid dehydratase;protein_id=WP_003900824.1;transl_table=11 NZ_KK316850.1 RefSeq gene 222085 222375 . + . ID=gene-AL60_RS15350;Name=AL60_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15350;old_locus_tag=AL60_01981 NZ_KK316850.1 Protein Homology CDS 222085 222375 . + 0 ID=cds-WP_003401147.1;Parent=gene-AL60_RS15350;Dbxref=GenBank:WP_003401147.1;Name=WP_003401147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214704.1;locus_tag=AL60_RS15350;product=copper-sensing transcriptional repressor RicR;protein_id=WP_003401147.1;transl_table=11 NZ_KK316850.1 RefSeq gene 222503 223744 . + . ID=gene-AL60_RS15355;Name=AL60_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15355;old_locus_tag=AL60_01982 NZ_KK316850.1 Protein Homology CDS 222503 223744 . + 0 ID=cds-WP_003401149.1;Parent=gene-AL60_RS15355;Dbxref=GenBank:WP_003401149.1;Name=WP_003401149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214705.1;locus_tag=AL60_RS15355;product=Rv0191 family MFS efflux transporter;protein_id=WP_003401149.1;transl_table=11 NZ_KK316850.1 RefSeq gene 223778 224878 . + . ID=gene-AL60_RS15360;Name=ldtMt4;gbkey=Gene;gene=ldtMt4;gene_biotype=protein_coding;locus_tag=AL60_RS15360;old_locus_tag=AL60_01983 NZ_KK316850.1 Protein Homology CDS 223778 224878 . + 0 ID=cds-WP_003899849.1;Parent=gene-AL60_RS15360;Dbxref=GenBank:WP_003899849.1;Name=WP_003899849.1;gbkey=CDS;gene=ldtMt4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899849.1;locus_tag=AL60_RS15360;product=L%2CD-transpeptidase LdtMt4;protein_id=WP_003899849.1;transl_table=11 NZ_KK316850.1 RefSeq gene 224938 226785 . - . ID=gene-AL60_RS15365;Name=AL60_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15365;old_locus_tag=AL60_01985 NZ_KK316850.1 Protein Homology CDS 224938 226785 . - 0 ID=cds-WP_003899850.1;Parent=gene-AL60_RS15365;Dbxref=GenBank:WP_003899850.1;Name=WP_003899850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214707.1;locus_tag=AL60_RS15365;product=hypothetical protein;protein_id=WP_003899850.1;transl_table=11 NZ_KK316850.1 RefSeq gene 227092 230676 . + . ID=gene-AL60_RS15370;Name=AL60_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15370;old_locus_tag=AL60_01986 NZ_KK316850.1 Protein Homology CDS 227092 230676 . + 0 ID=cds-WP_003899851.1;Parent=gene-AL60_RS15370;Dbxref=GenBank:WP_003899851.1;Name=WP_003899851.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214708.1;locus_tag=AL60_RS15370;product=ABC transporter ATP-binding protein;protein_id=WP_003899851.1;transl_table=11 NZ_KK316850.1 RefSeq gene 231113 231748 . + . ID=gene-AL60_RS15375;Name=AL60_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15375;old_locus_tag=AL60_01987 NZ_KK316850.1 Protein Homology CDS 231113 231748 . + 0 ID=cds-WP_003901824.1;Parent=gene-AL60_RS15375;Dbxref=GenBank:WP_003901824.1;Name=WP_003901824.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214709.1;locus_tag=AL60_RS15375;product=response regulator transcription factor;protein_id=WP_003901824.1;transl_table=11 NZ_KK316850.1 RefSeq gene 231861 232445 . + . ID=gene-AL60_RS15380;Name=AL60_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15380;old_locus_tag=AL60_01988 NZ_KK316850.1 Protein Homology CDS 231861 232445 . + 0 ID=cds-WP_003401168.1;Parent=gene-AL60_RS15380;Dbxref=GenBank:WP_003401168.1;Name=WP_003401168.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214710.1;locus_tag=AL60_RS15380;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401168.1;transl_table=11 NZ_KK316850.1 RefSeq gene 232445 234691 . + . ID=gene-AL60_RS15385;Name=AL60_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15385;old_locus_tag=AL60_01989 NZ_KK316850.1 Protein Homology CDS 232445 234691 . + 0 ID=cds-WP_003913548.1;Parent=gene-AL60_RS15385;Dbxref=GenBank:WP_003913548.1;Name=WP_003913548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302437.1;locus_tag=AL60_RS15385;product=molybdopterin oxidoreductase family protein;protein_id=WP_003913548.1;transl_table=11 NZ_KK316850.1 RefSeq gene 234732 236723 . - . ID=gene-AL60_RS15390;Name=zmp1;gbkey=Gene;gene=zmp1;gene_biotype=protein_coding;locus_tag=AL60_RS15390;old_locus_tag=AL60_01990 NZ_KK316850.1 Protein Homology CDS 234732 236723 . - 0 ID=cds-WP_003401172.1;Parent=gene-AL60_RS15390;Dbxref=GenBank:WP_003401172.1;Name=WP_003401172.1;gbkey=CDS;gene=zmp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214712.1;locus_tag=AL60_RS15390;product=zinc metalloprotease Zmp1;protein_id=WP_003401172.1;transl_table=11 NZ_KK316850.1 RefSeq gene 236766 237425 . + . ID=gene-AL60_RS15395;Name=AL60_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15395;old_locus_tag=AL60_01991 NZ_KK316850.1 Protein Homology CDS 236766 237425 . + 0 ID=cds-WP_003401181.1;Parent=gene-AL60_RS15395;Dbxref=GenBank:WP_003401181.1;Name=WP_003401181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214713.1;locus_tag=AL60_RS15395;product=hypothetical protein;protein_id=WP_003401181.1;transl_table=11 NZ_KK316850.1 RefSeq gene 237422 238111 . + . ID=gene-AL60_RS15400;Name=AL60_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15400;old_locus_tag=AL60_01992 NZ_KK316850.1 Protein Homology CDS 237422 238111 . + 0 ID=cds-WP_003401184.1;Parent=gene-AL60_RS15400;Dbxref=GenBank:WP_003401184.1;Name=WP_003401184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214714.1;locus_tag=AL60_RS15400;product=hypothetical protein;protein_id=WP_003401184.1;transl_table=11 NZ_KK316850.1 RefSeq gene 238108 238611 . - . ID=gene-AL60_RS15405;Name=AL60_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15405;old_locus_tag=AL60_01993 NZ_KK316850.1 Protein Homology CDS 238108 238611 . - 0 ID=cds-WP_003401187.1;Parent=gene-AL60_RS15405;Dbxref=GenBank:WP_003401187.1;Name=WP_003401187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214715.1;locus_tag=AL60_RS15405;product=hypothetical protein;protein_id=WP_003401187.1;transl_table=11 NZ_KK316850.1 RefSeq gene 238608 241508 . - . ID=gene-AL60_RS15410;Name=mmpL11;gbkey=Gene;gene=mmpL11;gene_biotype=protein_coding;locus_tag=AL60_RS15410;old_locus_tag=AL60_01994 NZ_KK316850.1 Protein Homology CDS 238608 241508 . - 0 ID=cds-WP_003401190.1;Parent=gene-AL60_RS15410;Dbxref=GenBank:WP_003401190.1;Name=WP_003401190.1;gbkey=CDS;gene=mmpL11;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214716.1;locus_tag=AL60_RS15410;product=RND transporter MmpL11;protein_id=WP_003401190.1;transl_table=11 NZ_KK316850.1 RefSeq gene 241730 242140 . + . ID=gene-AL60_RS15415;Name=AL60_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15415;old_locus_tag=AL60_01995 NZ_KK316850.1 Protein Homology CDS 241730 242140 . + 0 ID=cds-WP_003401194.1;Parent=gene-AL60_RS15415;Dbxref=GenBank:WP_003401194.1;Name=WP_003401194.1;Ontology_term=GO:0015886,GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214717.1;locus_tag=AL60_RS15415;product=hemophore;protein_id=WP_003401194.1;transl_table=11 NZ_KK316850.1 RefSeq gene 242192 243430 . - . ID=gene-AL60_RS15420;Name=AL60_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15420;old_locus_tag=AL60_01996 NZ_KK316850.1 Protein Homology CDS 242192 243430 . - 0 ID=cds-WP_023641653.1;Parent=gene-AL60_RS15420;Dbxref=GenBank:WP_023641653.1;Name=WP_023641653.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214718.2;locus_tag=AL60_RS15420;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_023641653.1;transl_table=11 NZ_KK316850.1 RefSeq gene 243600 244703 . + . ID=gene-AL60_RS15425;Name=AL60_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15425;old_locus_tag=AL60_01997 NZ_KK316850.1 Protein Homology CDS 243600 244703 . + 0 ID=cds-WP_011961629.1;Parent=gene-AL60_RS15425;Dbxref=GenBank:WP_011961629.1;Name=WP_011961629.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214719.1;locus_tag=AL60_RS15425;product=AI-2E family transporter;protein_id=WP_011961629.1;transl_table=11 NZ_KK316850.1 RefSeq gene 244700 247534 . - . ID=gene-AL60_RS15430;Name=mmpL3;gbkey=Gene;gene=mmpL3;gene_biotype=protein_coding;locus_tag=AL60_RS15430;old_locus_tag=AL60_01998 NZ_KK316850.1 Protein Homology CDS 244700 247534 . - 0 ID=cds-WP_011961630.1;Parent=gene-AL60_RS15430;Dbxref=GenBank:WP_011961630.1;Name=WP_011961630.1;gbkey=CDS;gene=mmpL3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214720.1;locus_tag=AL60_RS15430;product=trehalose monomycolate RND transporter MmpL3;protein_id=WP_011961630.1;transl_table=11 NZ_KK316850.1 RefSeq gene 247600 248328 . - . ID=gene-AL60_RS15435;Name=AL60_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15435;old_locus_tag=AL60_01999 NZ_KK316850.1 Protein Homology CDS 247600 248328 . - 0 ID=cds-WP_003401202.1;Parent=gene-AL60_RS15435;Dbxref=GenBank:WP_003401202.1;Name=WP_003401202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214721.1;locus_tag=AL60_RS15435;product=NYN domain-containing protein;protein_id=WP_003401202.1;transl_table=11 NZ_KK316850.1 RefSeq gene 248331 249122 . - . ID=gene-AL60_RS15440;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=AL60_RS15440;old_locus_tag=AL60_02000 NZ_KK316850.1 Protein Homology CDS 248331 249122 . - 0 ID=cds-WP_003401204.1;Parent=gene-AL60_RS15440;Dbxref=GenBank:WP_003401204.1;Name=WP_003401204.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214722.1;locus_tag=AL60_RS15440;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_003401204.1;transl_table=11 NZ_KK316850.1 RefSeq gene 249254 250339 . + . ID=gene-AL60_RS15445;Name=AL60_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15445;old_locus_tag=AL60_02001 NZ_KK316850.1 Protein Homology CDS 249254 250339 . + 0 ID=cds-WP_003907228.1;Parent=gene-AL60_RS15445;Dbxref=GenBank:WP_003907228.1;Name=WP_003907228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214723.1;locus_tag=AL60_RS15445;product=hypothetical protein;protein_id=WP_003907228.1;transl_table=11 NZ_KK316850.1 RefSeq gene 250336 251814 . + . ID=gene-AL60_RS15450;Name=AL60_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15450;old_locus_tag=AL60_02002 NZ_KK316850.1 Protein Homology CDS 250336 251814 . + 0 ID=cds-WP_003899858.1;Parent=gene-AL60_RS15450;Dbxref=GenBank:WP_003899858.1;Name=WP_003899858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214724.1;locus_tag=AL60_RS15450;product=hypothetical protein;protein_id=WP_003899858.1;transl_table=11 NZ_KK316850.1 RefSeq gene 251998 253818 . + . ID=gene-AL60_RS15455;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=AL60_RS15455;old_locus_tag=AL60_02003 NZ_KK316850.1 Protein Homology CDS 251998 253818 . + 0 ID=cds-WP_003401212.1;Parent=gene-AL60_RS15455;Dbxref=GenBank:WP_003401212.1;Name=WP_003401212.1;Ontology_term=GO:0006094,GO:0004611,GO:0005525,GO:0017076;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase activity|0004611||IEA,GTP binding|0005525||IEA,purine nucleotide binding|0017076||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214725.1;locus_tag=AL60_RS15455;product=phosphoenolpyruvate carboxykinase (GTP);protein_id=WP_003401212.1;transl_table=11 NZ_KK316850.1 RefSeq gene 253885 254856 . - . ID=gene-AL60_RS15460;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=AL60_RS15460;old_locus_tag=AL60_02004 NZ_KK316850.1 Protein Homology CDS 253885 254856 . - 0 ID=cds-WP_003401213.1;Parent=gene-AL60_RS15460;Dbxref=GenBank:WP_003401213.1;Name=WP_003401213.1;Ontology_term=GO:0009435,GO:0000309;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214726.1;locus_tag=AL60_RS15460;product=nicotinamide-nucleotide adenylyltransferase;protein_id=WP_003401213.1;transl_table=11 NZ_KK316850.1 RefSeq gene 254853 256286 . - . ID=gene-AL60_RS15465;Name=AL60_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15465;old_locus_tag=AL60_02005 NZ_KK316850.1 Protein Homology CDS 254853 256286 . - 0 ID=cds-WP_003911129.1;Parent=gene-AL60_RS15465;Dbxref=GenBank:WP_003911129.1;Name=WP_003911129.1;Ontology_term=GO:0003824,GO:0031419,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,cobalamin binding|0031419||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911129.1;locus_tag=AL60_RS15465;product=B12-binding domain-containing radical SAM protein;protein_id=WP_003911129.1;transl_table=11 NZ_KK316850.1 RefSeq gene 256376 257893 . + . ID=gene-AL60_RS15470;Name=fadD4;gbkey=Gene;gene=fadD4;gene_biotype=protein_coding;locus_tag=AL60_RS15470;old_locus_tag=AL60_02006 NZ_KK316850.1 Protein Homology CDS 256376 257893 . + 0 ID=cds-WP_003911098.1;Parent=gene-AL60_RS15470;Dbxref=GenBank:WP_003911098.1;Name=WP_003911098.1;gbkey=CDS;gene=fadD4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009979674.1;locus_tag=AL60_RS15470;product=fatty-acid--CoA ligase FadD4;protein_id=WP_003911098.1;transl_table=11 NZ_KK316850.1 RefSeq pseudogene 257935 259042 . - . ID=gene-AL60_RS15475;Name=AL60_RS15475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS15475;old_locus_tag=AL60_02007;pseudo=true NZ_KK316850.1 Protein Homology CDS 257935 259042 . - 0 ID=cds-AL60_RS15475;Parent=gene-AL60_RS15475;Note=frameshifted;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016705807.1;locus_tag=AL60_RS15475;product=acyl-CoA dehydrogenase family protein;pseudo=true;transl_table=11 NZ_KK316850.1 RefSeq gene 259129 260142 . + . ID=gene-AL60_RS15480;Name=AL60_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15480;old_locus_tag=AL60_02008 NZ_KK316850.1 Protein Homology CDS 259129 260142 . + 0 ID=cds-WP_003401224.1;Parent=gene-AL60_RS15480;Dbxref=GenBank:WP_003401224.1;Name=WP_003401224.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214730.1;locus_tag=AL60_RS15480;product=MaoC family dehydratase;protein_id=WP_003401224.1;transl_table=11 NZ_KK316850.1 RefSeq gene 260139 261047 . - . ID=gene-AL60_RS15485;Name=lipW;gbkey=Gene;gene=lipW;gene_biotype=protein_coding;locus_tag=AL60_RS15485;old_locus_tag=AL60_02009 NZ_KK316850.1 Protein Homology CDS 260139 261047 . - 0 ID=cds-WP_003900831.1;Parent=gene-AL60_RS15485;Dbxref=GenBank:WP_003900831.1;Name=WP_003900831.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipW;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214731.1;locus_tag=AL60_RS15485;product=alpha/beta hydrolase;protein_id=WP_003900831.1;transl_table=11 NZ_KK316850.1 RefSeq gene 261140 262468 . + . ID=gene-AL60_RS15490;Name=AL60_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15490;old_locus_tag=AL60_02010 NZ_KK316850.1 Protein Homology CDS 261140 262468 . + 0 ID=cds-WP_003901829.1;Parent=gene-AL60_RS15490;Dbxref=GenBank:WP_003901829.1;Name=WP_003901829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214732.1;locus_tag=AL60_RS15490;product=molybdopterin-dependent oxidoreductase;protein_id=WP_003901829.1;transl_table=11 NZ_KK316850.1 RefSeq gene 262470 263018 . + . ID=gene-AL60_RS15495;Name=AL60_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15495;old_locus_tag=AL60_02011 NZ_KK316850.1 Protein Homology CDS 262470 263018 . + 0 ID=cds-WP_003401230.1;Parent=gene-AL60_RS15495;Dbxref=GenBank:WP_003401230.1;Name=WP_003401230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214733.1;locus_tag=AL60_RS15495;product=hypothetical protein;protein_id=WP_003401230.1;transl_table=11 NZ_KK316850.1 RefSeq gene 263028 264239 . + . ID=gene-AL60_RS15500;Name=lipC;gbkey=Gene;gene=lipC;gene_biotype=protein_coding;locus_tag=AL60_RS15500;old_locus_tag=AL60_02012 NZ_KK316850.1 Protein Homology CDS 263028 264239 . + 0 ID=cds-WP_003899863.1;Parent=gene-AL60_RS15500;Dbxref=GenBank:WP_003899863.1;Name=WP_003899863.1;gbkey=CDS;gene=lipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214734.1;locus_tag=AL60_RS15500;product=esterase LipC;protein_id=WP_003899863.1;transl_table=11 NZ_KK316850.1 RefSeq gene 264283 265692 . + . ID=gene-AL60_RS15505;Name=AL60_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15505;old_locus_tag=AL60_02013 NZ_KK316850.1 Protein Homology CDS 264283 265692 . + 0 ID=cds-WP_011961631.1;Parent=gene-AL60_RS15505;Dbxref=GenBank:WP_011961631.1;Name=WP_011961631.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214735.1;locus_tag=AL60_RS15505;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_011961631.1;transl_table=11 NZ_KK316850.1 RefSeq gene 265723 266511 . + . ID=gene-AL60_RS15510;Name=AL60_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15510;old_locus_tag=AL60_02014 NZ_KK316850.1 Protein Homology CDS 265723 266511 . + 0 ID=cds-WP_003899864.1;Parent=gene-AL60_RS15510;Dbxref=GenBank:WP_003899864.1;Name=WP_003899864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214736.1;locus_tag=AL60_RS15510;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003899864.1;transl_table=11 NZ_KK316850.1 RefSeq gene 266517 267980 . - . ID=gene-AL60_RS15515;Name=AL60_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15515;old_locus_tag=AL60_02015 NZ_KK316850.1 Protein Homology CDS 266517 267980 . - 0 ID=cds-WP_003899865.1;Parent=gene-AL60_RS15515;Dbxref=GenBank:WP_003899865.1;Name=WP_003899865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214737.1;locus_tag=AL60_RS15515;product=aldehyde dehydrogenase;protein_id=WP_003899865.1;transl_table=11 NZ_KK316850.1 RefSeq gene 268079 268843 . - . ID=gene-AL60_RS15520;Name=AL60_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15520;old_locus_tag=AL60_02016 NZ_KK316850.1 Protein Homology CDS 268079 268843 . - 0 ID=cds-WP_003401240.1;Parent=gene-AL60_RS15520;Dbxref=GenBank:WP_003401240.1;Name=WP_003401240.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214738.1;locus_tag=AL60_RS15520;product=class I SAM-dependent methyltransferase;protein_id=WP_003401240.1;transl_table=11 NZ_KK316850.1 RefSeq gene 268879 270033 . + . ID=gene-AL60_RS15525;Name=AL60_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15525;old_locus_tag=AL60_02017 NZ_KK316850.1 Protein Homology CDS 268879 270033 . + 0 ID=cds-WP_003401246.1;Parent=gene-AL60_RS15525;Dbxref=GenBank:WP_003401246.1;Name=WP_003401246.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214739.1;locus_tag=AL60_RS15525;product=glycosyltransferase family 4 protein;protein_id=WP_003401246.1;transl_table=11 NZ_KK316850.1 RefSeq gene 270050 271780 . - . ID=gene-AL60_RS15530;Name=AL60_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15530;old_locus_tag=AL60_02018 NZ_KK316850.1 Protein Homology CDS 270050 271780 . - 0 ID=cds-WP_003401250.1;Parent=gene-AL60_RS15530;Dbxref=GenBank:WP_003401250.1;Name=WP_003401250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214740.1;locus_tag=AL60_RS15530;product=MmpA family trehalose lipid delivery protein;protein_id=WP_003401250.1;transl_table=11 NZ_KK316850.1 RefSeq gene 271790 273070 . - . ID=gene-AL60_RS15535;Name=AL60_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15535;old_locus_tag=AL60_02019 NZ_KK316850.1 Protein Homology CDS 271790 273070 . - 0 ID=cds-WP_016719572.1;Parent=gene-AL60_RS15535;Dbxref=GenBank:WP_016719572.1;Name=WP_016719572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019284112.1;locus_tag=AL60_RS15535;product=cell envelope lipid trafficking protein PgfA;protein_id=WP_016719572.1;transl_table=11 NZ_KK316850.1 RefSeq pseudogene 273072 273171 . - . ID=gene-AL60_RS28145;Name=AL60_RS28145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28145;partial=true;pseudo=true;start_range=.,273072 NZ_KK316850.1 Protein Homology CDS 273072 273171 . - 0 ID=cds-AL60_RS28145;Parent=gene-AL60_RS28145;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=AL60_RS28145;partial=true;product=hypothetical protein;pseudo=true;start_range=.,273072;transl_table=11 NZ_KK316850.1 RefSeq gene 273271 274494 . + . ID=gene-AL60_RS15540;Name=AL60_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15540;old_locus_tag=AL60_02020 NZ_KK316850.1 Protein Homology CDS 273271 274494 . + 0 ID=cds-WP_003401260.1;Parent=gene-AL60_RS15540;Dbxref=GenBank:WP_003401260.1;Name=WP_003401260.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214742.1;locus_tag=AL60_RS15540;product=acyltransferase family protein;protein_id=WP_003401260.1;transl_table=11 NZ_KK316850.1 RefSeq gene 274522 274935 . - . ID=gene-AL60_RS15545;Name=AL60_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15545;old_locus_tag=AL60_02021 NZ_KK316850.1 Protein Homology CDS 274522 274935 . - 0 ID=cds-WP_003911071.1;Parent=gene-AL60_RS15545;Dbxref=GenBank:WP_003911071.1;Name=WP_003911071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214743.2;locus_tag=AL60_RS15545;product=PIN domain nuclease;protein_id=WP_003911071.1;transl_table=11 NZ_KK316850.1 RefSeq gene 274926 275120 . - . ID=gene-AL60_RS15550;Name=AL60_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15550;old_locus_tag=AL60_02022 NZ_KK316850.1 Protein Homology CDS 274926 275120 . - 0 ID=cds-WP_003911072.1;Parent=gene-AL60_RS15550;Dbxref=GenBank:WP_003911072.1;Name=WP_003911072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911072.1;locus_tag=AL60_RS15550;product=hypothetical protein;protein_id=WP_003911072.1;transl_table=11 NZ_KK316850.1 RefSeq gene 275199 276179 . - . ID=gene-AL60_RS15555;Name=php;gbkey=Gene;gene=php;gene_biotype=protein_coding;locus_tag=AL60_RS15555;old_locus_tag=AL60_02023 NZ_KK316850.1 Protein Homology CDS 275199 276179 . - 0 ID=cds-WP_003900835.1;Parent=gene-AL60_RS15555;Dbxref=GenBank:WP_003900835.1;Name=WP_003900835.1;gbkey=CDS;gene=php;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214744.1;locus_tag=AL60_RS15555;product=phosphotriesterase-related protein;protein_id=WP_003900835.1;transl_table=11 NZ_KK316850.1 RefSeq gene 276274 277980 . + . ID=gene-AL60_RS15560;Name=AL60_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15560;old_locus_tag=AL60_02024 NZ_KK316850.1 Protein Homology CDS 276274 277980 . + 0 ID=cds-WP_003401265.1;Parent=gene-AL60_RS15560;Dbxref=GenBank:WP_003401265.1;Name=WP_003401265.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214745.1;locus_tag=AL60_RS15560;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003401265.1;transl_table=11 NZ_KK316850.1 RefSeq gene 278115 278804 . + . ID=gene-AL60_RS15565;Name=AL60_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15565;old_locus_tag=AL60_02025 NZ_KK316850.1 Protein Homology CDS 278115 278804 . + 0 ID=cds-WP_003401268.1;Parent=gene-AL60_RS15565;Dbxref=GenBank:WP_003401268.1;Name=WP_003401268.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214746.1;locus_tag=AL60_RS15565;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401268.1;transl_table=11 NZ_KK316850.1 RefSeq gene 278801 279745 . + . ID=gene-AL60_RS15570;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AL60_RS15570;old_locus_tag=AL60_02026 NZ_KK316850.1 Protein Homology CDS 278801 279745 . + 0 ID=cds-WP_003401270.1;Parent=gene-AL60_RS15570;Dbxref=GenBank:WP_003401270.1;Name=WP_003401270.1;gbkey=CDS;gene=nrdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214747.1;locus_tag=AL60_RS15570;product=R2-like ligand-binding oxidase;protein_id=WP_003401270.1;transl_table=11 NZ_KK316850.1 RefSeq gene 279821 281194 . - . ID=gene-AL60_RS15575;Name=AL60_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15575;old_locus_tag=AL60_02027 NZ_KK316850.1 Protein Homology CDS 279821 281194 . - 0 ID=cds-WP_003912534.1;Parent=gene-AL60_RS15575;Dbxref=GenBank:WP_003912534.1;Name=WP_003912534.1;Ontology_term=GO:0004030;gbkey=CDS;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908967.1;locus_tag=AL60_RS15575;product=NADP-dependent succinic semialdehyde dehydrogenase;protein_id=WP_003912534.1;transl_table=11 NZ_KK316850.1 RefSeq gene 281382 282830 . - . ID=gene-AL60_RS15580;Name=AL60_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15580;old_locus_tag=AL60_02028 NZ_KK316850.1 Protein Homology CDS 281382 282830 . - 0 ID=cds-WP_003401279.1;Parent=gene-AL60_RS15580;Dbxref=GenBank:WP_003401279.1;Name=WP_003401279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214749.1;locus_tag=AL60_RS15580;product=lipase maturation factor family protein;protein_id=WP_003401279.1;transl_table=11 NZ_KK316850.1 RefSeq gene 282865 287067 . - . ID=gene-AL60_RS15585;Name=aftD;gbkey=Gene;gene=aftD;gene_biotype=protein_coding;locus_tag=AL60_RS15585;old_locus_tag=AL60_02029 NZ_KK316850.1 Protein Homology CDS 282865 287067 . - 0 ID=cds-WP_011961632.1;Parent=gene-AL60_RS15585;Dbxref=GenBank:WP_011961632.1;Name=WP_011961632.1;Ontology_term=GO:0016740;gbkey=CDS;gene=aftD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214750.1;locus_tag=AL60_RS15585;product=DUF3367 domain-containing protein;protein_id=WP_011961632.1;transl_table=11 NZ_KK316850.1 RefSeq gene 287114 287287 . - . ID=gene-AL60_RS15590;Name=AL60_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15590;old_locus_tag=AL60_02030 NZ_KK316850.1 Protein Homology CDS 287114 287287 . - 0 ID=cds-WP_003401289.1;Parent=gene-AL60_RS15590;Dbxref=GenBank:WP_003401289.1;Name=WP_003401289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177619.1;locus_tag=AL60_RS15590;product=DUF2613 domain-containing protein;protein_id=WP_003401289.1;transl_table=11 NZ_KK316850.1 RefSeq gene 287402 288568 . + . ID=gene-AL60_RS15595;Name=lpqI;gbkey=Gene;gene=lpqI;gene_biotype=protein_coding;locus_tag=AL60_RS15595;old_locus_tag=AL60_02031 NZ_KK316850.1 Protein Homology CDS 287402 288568 . + 0 ID=cds-WP_012054224.1;Parent=gene-AL60_RS15595;Dbxref=GenBank:WP_012054224.1;Name=WP_012054224.1;gbkey=CDS;gene=lpqI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177702.1;locus_tag=AL60_RS15595;product=beta-N-acetylhexosaminidase;protein_id=WP_012054224.1;transl_table=11 NZ_KK316850.1 RefSeq gene 288644 289258 . + . ID=gene-AL60_RS15600;Name=AL60_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15600;old_locus_tag=AL60_02032 NZ_KK316850.1 Protein Homology CDS 288644 289258 . + 0 ID=cds-WP_003401297.1;Parent=gene-AL60_RS15600;Dbxref=GenBank:WP_003401297.1;Name=WP_003401297.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214752.1;locus_tag=AL60_RS15600;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401297.1;transl_table=11 NZ_KK316850.1 RefSeq gene 289320 289553 . + . ID=gene-AL60_RS15605;Name=AL60_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15605;old_locus_tag=AL60_02033 NZ_KK316850.1 Protein Homology CDS 289320 289553 . + 0 ID=cds-WP_003401300.1;Parent=gene-AL60_RS15605;Dbxref=GenBank:WP_003401300.1;Name=WP_003401300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214753.1;locus_tag=AL60_RS15605;product=antitoxin;protein_id=WP_003401300.1;transl_table=11 NZ_KK316850.1 RefSeq gene 289561 289998 . + . ID=gene-AL60_RS15610;Name=AL60_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15610;old_locus_tag=AL60_02034 NZ_KK316850.1 Protein Homology CDS 289561 289998 . + 0 ID=cds-WP_003900837.1;Parent=gene-AL60_RS15610;Dbxref=GenBank:WP_003900837.1;Name=WP_003900837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214754.1;locus_tag=AL60_RS15610;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003900837.1;transl_table=11 NZ_KK316850.1 RefSeq gene 290028 290870 . - . ID=gene-AL60_RS15615;Name=htdX;gbkey=Gene;gene=htdX;gene_biotype=protein_coding;locus_tag=AL60_RS15615;old_locus_tag=AL60_02035 NZ_KK316850.1 Protein Homology CDS 290028 290870 . - 0 ID=cds-WP_003401305.1;Parent=gene-AL60_RS15615;Dbxref=GenBank:WP_003401305.1;Name=WP_003401305.1;gbkey=CDS;gene=htdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214755.1;locus_tag=AL60_RS15615;product=3-hydroxyacyl-thioester dehydratase HtdX;protein_id=WP_003401305.1;transl_table=11 NZ_KK316850.1 RefSeq gene 290881 292245 . - . ID=gene-AL60_RS15620;Name=AL60_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15620;old_locus_tag=AL60_02036 NZ_KK316850.1 Protein Homology CDS 290881 292245 . - 0 ID=cds-WP_003899869.1;Parent=gene-AL60_RS15620;Dbxref=GenBank:WP_003899869.1;Name=WP_003899869.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214756.1;locus_tag=AL60_RS15620;product=3-oxoacyl-ACP reductase;protein_id=WP_003899869.1;transl_table=11 NZ_KK316850.1 RefSeq gene 292387 293709 . + . ID=gene-AL60_RS15625;Name=AL60_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15625;old_locus_tag=AL60_02037 NZ_KK316850.1 Protein Homology CDS 292387 293709 . + 0 ID=cds-WP_003401309.1;Parent=gene-AL60_RS15625;Dbxref=GenBank:WP_003401309.1;Name=WP_003401309.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214757.1;locus_tag=AL60_RS15625;product=acetyl-CoA C-acetyltransferase;protein_id=WP_003401309.1;transl_table=11 NZ_KK316850.1 RefSeq gene 294013 295848 . - . ID=gene-AL60_RS15630;Name=AL60_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15630;old_locus_tag=AL60_02038 NZ_KK316850.1 Protein Homology CDS 294013 295848 . - 0 ID=cds-WP_003401312.1;Parent=gene-AL60_RS15630;Dbxref=GenBank:WP_003401312.1;Name=WP_003401312.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214758.1;locus_tag=AL60_RS15630;product=acyl-CoA dehydrogenase;protein_id=WP_003401312.1;transl_table=11 NZ_KK316850.1 RefSeq gene 296220 296708 . + . ID=gene-AL60_RS15635;Name=AL60_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15635;old_locus_tag=AL60_02039 NZ_KK316850.1 Protein Homology CDS 296220 296708 . + 0 ID=cds-WP_003401313.1;Parent=gene-AL60_RS15635;Dbxref=GenBank:WP_003401313.1;Name=WP_003401313.1;Ontology_term=GO:0010181,GO:0016491,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214759.1;locus_tag=AL60_RS15635;product=flavin reductase family protein;protein_id=WP_003401313.1;transl_table=11 NZ_KK316850.1 RefSeq gene 297024 298334 . + . ID=gene-AL60_RS15640;Name=AL60_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15640;old_locus_tag=AL60_02040 NZ_KK316850.1 Protein Homology CDS 297024 298334 . + 0 ID=cds-WP_003401317.1;Parent=gene-AL60_RS15640;Dbxref=GenBank:WP_003401317.1;Name=WP_003401317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214760.1;locus_tag=AL60_RS15640;product=integral membrane protein;protein_id=WP_003401317.1;transl_table=11 NZ_KK316850.1 RefSeq gene 298331 299077 . - . ID=gene-AL60_RS15645;Name=AL60_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15645;old_locus_tag=AL60_02041 NZ_KK316850.1 Protein Homology CDS 298331 299077 . - 0 ID=cds-WP_003401319.1;Parent=gene-AL60_RS15645;Dbxref=GenBank:WP_003401319.1;Name=WP_003401319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214761.1;locus_tag=AL60_RS15645;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_003401319.1;transl_table=11 NZ_KK316850.1 RefSeq gene 299078 301018 . - . ID=gene-AL60_RS15650;Name=AL60_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15650;old_locus_tag=AL60_02042 NZ_KK316850.1 Protein Homology CDS 299078 301018 . - 0 ID=cds-WP_003401322.1;Parent=gene-AL60_RS15650;Dbxref=GenBank:WP_003401322.1;Name=WP_003401322.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214762.1;locus_tag=AL60_RS15650;product=fumarate reductase/succinate dehydrogenase flavoprotein subunit;protein_id=WP_003401322.1;transl_table=11 NZ_KK316850.1 RefSeq gene 301049 301870 . - . ID=gene-AL60_RS15655;Name=AL60_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15655;old_locus_tag=AL60_02043 NZ_KK316850.1 Protein Homology CDS 301049 301870 . - 0 ID=cds-WP_003401324.1;Parent=gene-AL60_RS15655;Dbxref=GenBank:WP_003401324.1;Name=WP_003401324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214763.1;locus_tag=AL60_RS15655;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_003401324.1;transl_table=11 NZ_KK316850.1 RefSeq gene 301950 302243 . - . ID=gene-AL60_RS15660;Name=AL60_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15660;old_locus_tag=AL60_02044 NZ_KK316850.1 Protein Homology CDS 301950 302243 . - 0 ID=cds-WP_003401329.1;Parent=gene-AL60_RS15660;Dbxref=GenBank:WP_003401329.1;Name=WP_003401329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214764.1;locus_tag=AL60_RS15660;product=hypothetical protein;protein_id=WP_003401329.1;transl_table=11 NZ_KK316850.1 RefSeq gene 302388 302867 . - . ID=gene-AL60_RS15665;Name=acr2;gbkey=Gene;gene=acr2;gene_biotype=protein_coding;gene_synonym=hsp;locus_tag=AL60_RS15665;old_locus_tag=AL60_02045 NZ_KK316850.1 Protein Homology CDS 302388 302867 . - 0 ID=cds-WP_003900838.1;Parent=gene-AL60_RS15665;Dbxref=GenBank:WP_003900838.1;Name=WP_003900838.1;gbkey=CDS;gene=acr2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214765.1;locus_tag=AL60_RS15665;product=stress-responsive chaperone Acr2;protein_id=WP_003900838.1;transl_table=11 NZ_KK316850.1 RefSeq gene 303081 305642 . + . ID=gene-AL60_RS15670;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=AL60_RS15670;old_locus_tag=AL60_02046 NZ_KK316850.1 Protein Homology CDS 303081 305642 . + 0 ID=cds-WP_003401336.1;Parent=gene-AL60_RS15670;Dbxref=GenBank:WP_003401336.1;Name=WP_003401336.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214766.1;locus_tag=AL60_RS15670;product=nitrite reductase large subunit NirB;protein_id=WP_003401336.1;transl_table=11 NZ_KK316850.1 RefSeq gene 305668 306024 . + . ID=gene-AL60_RS15675;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=AL60_RS15675;old_locus_tag=AL60_02047 NZ_KK316850.1 Protein Homology CDS 305668 306024 . + 0 ID=cds-WP_003401341.1;Parent=gene-AL60_RS15675;Dbxref=GenBank:WP_003401341.1;Name=WP_003401341.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214767.1;locus_tag=AL60_RS15675;product=nitrite reductase small subunit NirD;protein_id=WP_003401341.1;transl_table=11 NZ_KK316850.1 RefSeq gene 306040 306564 . - . ID=gene-AL60_RS15680;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=AL60_RS15680;old_locus_tag=AL60_02048 NZ_KK316850.1 Protein Homology CDS 306040 306564 . - 0 ID=cds-WP_003899876.1;Parent=gene-AL60_RS15680;Dbxref=GenBank:WP_003899876.1;Name=WP_003899876.1;Ontology_term=GO:0009236,GO:0000166,GO:0008820,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,cobinamide phosphate guanylyltransferase activity|0008820||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214768.1;locus_tag=AL60_RS15680;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_003899876.1;transl_table=11 NZ_KK316850.1 RefSeq gene 306589 308073 . - . ID=gene-AL60_RS15685;Name=AL60_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15685;old_locus_tag=AL60_02049 NZ_KK316850.1 Protein Homology CDS 306589 308073 . - 0 ID=cds-WP_003899877.1;Parent=gene-AL60_RS15685;Dbxref=GenBank:WP_003899877.1;Name=WP_003899877.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177703.1;locus_tag=AL60_RS15685;product=cobyric acid synthase;protein_id=WP_003899877.1;transl_table=11 NZ_KK316850.1 RefSeq gene 308092 309762 . - . ID=gene-AL60_RS15690;Name=AL60_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15690;old_locus_tag=AL60_02050 NZ_KK316850.1 Protein Homology CDS 308092 309762 . - 0 ID=cds-WP_003401347.1;Parent=gene-AL60_RS15690;Dbxref=GenBank:WP_003401347.1;Name=WP_003401347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177704.1;locus_tag=AL60_RS15690;product=PPE family protein;protein_id=WP_003401347.1;transl_table=11 NZ_KK316850.1 cmsearch riboswitch 309901 310082 . - . ID=id-NZ_KK316850.1:309901..310082;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316850.1 RefSeq gene 310509 310964 . - . ID=gene-AL60_RS15700;Name=AL60_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15700;old_locus_tag=AL60_02052 NZ_KK316850.1 Protein Homology CDS 310509 310964 . - 0 ID=cds-WP_003401352.1;Parent=gene-AL60_RS15700;Dbxref=GenBank:WP_003401352.1;Name=WP_003401352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214772.1;locus_tag=AL60_RS15700;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401352.1;transl_table=11 NZ_KK316850.1 RefSeq gene 310989 311732 . - . ID=gene-AL60_RS15705;Name=AL60_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15705;old_locus_tag=AL60_02053 NZ_KK316850.1 Protein Homology CDS 310989 311732 . - 0 ID=cds-WP_003401354.1;Parent=gene-AL60_RS15705;Dbxref=GenBank:WP_003401354.1;Name=WP_003401354.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214773.1;locus_tag=AL60_RS15705;product=sirohydrochlorin chelatase;protein_id=WP_003401354.1;transl_table=11 NZ_KK316850.1 RefSeq gene 311729 312874 . - . ID=gene-AL60_RS15710;Name=AL60_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15710;old_locus_tag=AL60_02054 NZ_KK316850.1 Protein Homology CDS 311729 312874 . - 0 ID=cds-WP_003401357.1;Parent=gene-AL60_RS15710;Dbxref=GenBank:WP_003401357.1;Name=WP_003401357.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214774.1;locus_tag=AL60_RS15710;product=uroporphyrinogen-III synthase;protein_id=WP_003401357.1;transl_table=11 NZ_KK316850.1 RefSeq gene 312974 314383 . - . ID=gene-AL60_RS15715;Name=AL60_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15715;old_locus_tag=AL60_02055 NZ_KK316850.1 Protein Homology CDS 312974 314383 . - 0 ID=cds-WP_003401360.1;Parent=gene-AL60_RS15715;Dbxref=GenBank:WP_003401360.1;Name=WP_003401360.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214775.1;locus_tag=AL60_RS15715;product=MFS transporter;protein_id=WP_003401360.1;transl_table=11 NZ_KK316850.1 RefSeq gene 314524 315069 . - . ID=gene-AL60_RS15720;Name=aac(2')-Ic;gbkey=Gene;gene=aac(2')-Ic;gene_biotype=protein_coding;locus_tag=AL60_RS15720;old_locus_tag=AL60_02056 NZ_KK316850.1 Protein Homology CDS 314524 315069 . - 0 ID=cds-WP_003899880.1;Parent=gene-AL60_RS15720;Dbxref=GenBank:WP_003899880.1;Name=WP_003899880.1;gbkey=CDS;gene=aac(2')-Ic;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899880.1;locus_tag=AL60_RS15720;product=aminoglycoside N-acetyltransferase AAC(2')-Ic;protein_id=WP_003899880.1;transl_table=11 NZ_KK316850.1 RefSeq gene 315079 315981 . - . ID=gene-AL60_RS15725;Name=AL60_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15725;old_locus_tag=AL60_02057 NZ_KK316850.1 Protein Homology CDS 315079 315981 . - 0 ID=cds-WP_003401367.1;Parent=gene-AL60_RS15725;Dbxref=GenBank:WP_003401367.1;Name=WP_003401367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214777.1;locus_tag=AL60_RS15725;product=5-oxoprolinase/urea amidolyase family protein;protein_id=WP_003401367.1;transl_table=11 NZ_KK316850.1 RefSeq gene 315998 316630 . - . ID=gene-AL60_RS15730;Name=AL60_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15730;old_locus_tag=AL60_02058 NZ_KK316850.1 Protein Homology CDS 315998 316630 . - 0 ID=cds-WP_003907243.1;Parent=gene-AL60_RS15730;Dbxref=GenBank:WP_003907243.1;Name=WP_003907243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214778.1;locus_tag=AL60_RS15730;product=5-oxoprolinase subunit B family protein;protein_id=WP_003907243.1;transl_table=11 NZ_KK316850.1 RefSeq gene 316726 317718 . - . ID=gene-AL60_RS15735;Name=AL60_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15735;old_locus_tag=AL60_02059 NZ_KK316850.1 Protein Homology CDS 316726 317718 . - 0 ID=cds-WP_003401373.1;Parent=gene-AL60_RS15735;Dbxref=GenBank:WP_003401373.1;Name=WP_003401373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177705.1;locus_tag=AL60_RS15735;product=ABC transporter substrate-binding protein;protein_id=WP_003401373.1;transl_table=11 NZ_KK316850.1 RefSeq gene 317740 321369 . - . ID=gene-AL60_RS15740;Name=oplA;gbkey=Gene;gene=oplA;gene_biotype=protein_coding;locus_tag=AL60_RS15740;old_locus_tag=AL60_02060 NZ_KK316850.1 Protein Homology CDS 317740 321369 . - 0 ID=cds-WP_003899883.1;Parent=gene-AL60_RS15740;Dbxref=GenBank:WP_003899883.1;Name=WP_003899883.1;Ontology_term=GO:0003824;gbkey=CDS;gene=oplA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214780.1;locus_tag=AL60_RS15740;product=hydantoinase B/oxoprolinase family protein;protein_id=WP_003899883.1;transl_table=11 NZ_KK316850.1 RefSeq gene 321546 322937 . + . ID=gene-AL60_RS15745;Name=narU;gbkey=Gene;gene=narU;gene_biotype=protein_coding;locus_tag=AL60_RS15745;old_locus_tag=AL60_02061 NZ_KK316850.1 Protein Homology CDS 321546 322937 . + 0 ID=cds-WP_003401380.1;Parent=gene-AL60_RS15745;Dbxref=GenBank:WP_003401380.1;Name=WP_003401380.1;Ontology_term=GO:0015706,GO:0015707,GO:0015112,GO:0015113,GO:0016020;gbkey=CDS;gene=narU;go_component=membrane|0016020||IEA;go_function=nitrate transmembrane transporter activity|0015112||IEA,nitrite transmembrane transporter activity|0015113||IEA;go_process=nitrate transmembrane transport|0015706||IEA,nitrite transport|0015707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214781.1;locus_tag=AL60_RS15745;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_003401380.1;transl_table=11 NZ_KK316850.1 RefSeq gene 322979 323236 . - . ID=gene-AL60_RS27135;Name=AL60_RS27135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27135 NZ_KK316850.1 Protein Homology CDS 322979 323236 . - 0 ID=cds-WP_003911137.1;Parent=gene-AL60_RS27135;Dbxref=GenBank:WP_003911137.1;Name=WP_003911137.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: protein motif:HMM:TIGR01552.1;locus_tag=AL60_RS27135;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003911137.1;transl_table=11 NZ_KK316850.1 RefSeq gene 323233 323358 . - . ID=gene-AL60_RS27550;Name=AL60_RS27550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27550 NZ_KK316850.1 Protein Homology CDS 323233 323358 . - 0 ID=cds-WP_003918044.1;Parent=gene-AL60_RS27550;Dbxref=GenBank:WP_003918044.1;Name=WP_003918044.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: protein motif:HMM:NF016876.6;locus_tag=AL60_RS27550;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_003918044.1;transl_table=11 NZ_KK316850.1 RefSeq gene 323553 324746 . - . ID=gene-AL60_RS15755;Name=AL60_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15755;old_locus_tag=AL60_02063 NZ_KK316850.1 Protein Homology CDS 323553 324746 . - 0 ID=cds-WP_003401386.1;Parent=gene-AL60_RS15755;Dbxref=GenBank:WP_003401386.1;Name=WP_003401386.1;Ontology_term=GO:0006281;gbkey=CDS;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214783.1;locus_tag=AL60_RS15755;product=DNA polymerase domain-containing protein;protein_id=WP_003401386.1;transl_table=11 NZ_KK316850.1 RefSeq gene 324782 326464 . + . ID=gene-AL60_RS15760;Name=fadD2;gbkey=Gene;gene=fadD2;gene_biotype=protein_coding;locus_tag=AL60_RS15760;old_locus_tag=AL60_02064 NZ_KK316850.1 Protein Homology CDS 324782 326464 . + 0 ID=cds-WP_003899884.1;Parent=gene-AL60_RS15760;Dbxref=GenBank:WP_003899884.1;Name=WP_003899884.1;gbkey=CDS;gene=fadD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214784.1;locus_tag=AL60_RS15760;product=long-chain-fatty-acid--CoA ligase FadD2;protein_id=WP_003899884.1;transl_table=11 NZ_KK316850.1 RefSeq gene 326481 328676 . - . ID=gene-AL60_RS15765;Name=AL60_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15765;old_locus_tag=AL60_02065 NZ_KK316850.1 Protein Homology CDS 326481 328676 . - 0 ID=cds-WP_003401392.1;Parent=gene-AL60_RS15765;Dbxref=GenBank:WP_003401392.1;Name=WP_003401392.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214785.1;locus_tag=AL60_RS15765;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003401392.1;transl_table=11 NZ_KK316850.1 RefSeq gene 328790 329923 . - . ID=gene-AL60_RS15770;Name=AL60_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15770;old_locus_tag=AL60_02066 NZ_KK316850.1 Protein Homology CDS 328790 329923 . - 0 ID=cds-WP_003401394.1;Parent=gene-AL60_RS15770;Dbxref=GenBank:WP_003401394.1;Name=WP_003401394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214786.1;locus_tag=AL60_RS15770;product=alpha/beta fold hydrolase domain-containing protein;protein_id=WP_003401394.1;transl_table=11 NZ_KK316850.1 RefSeq gene 329920 330540 . - . ID=gene-AL60_RS15775;Name=AL60_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15775;old_locus_tag=AL60_02067 NZ_KK316850.1 Protein Homology CDS 329920 330540 . - 0 ID=cds-WP_003401397.1;Parent=gene-AL60_RS15775;Dbxref=GenBank:WP_003401397.1;Name=WP_003401397.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214787.1;locus_tag=AL60_RS15775;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401397.1;transl_table=11 NZ_KK316850.1 RefSeq gene 330637 331218 . + . ID=gene-AL60_RS15780;Name=AL60_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15780;old_locus_tag=AL60_02068 NZ_KK316850.1 Protein Homology CDS 330637 331218 . + 0 ID=cds-WP_003401399.1;Parent=gene-AL60_RS15780;Dbxref=GenBank:WP_003401399.1;Name=WP_003401399.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214788.1;locus_tag=AL60_RS15780;product=VOC family protein;protein_id=WP_003401399.1;transl_table=11 NZ_KK316850.1 RefSeq gene 331148 331873 . - . ID=gene-AL60_RS15785;Name=AL60_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15785;old_locus_tag=AL60_02069 NZ_KK316850.1 Protein Homology CDS 331148 331873 . - 0 ID=cds-WP_003899886.1;Parent=gene-AL60_RS15785;Dbxref=GenBank:WP_003899886.1;Name=WP_003899886.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177706.1;locus_tag=AL60_RS15785;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899886.1;transl_table=11 NZ_KK316850.1 RefSeq gene 331963 332883 . + . ID=gene-AL60_RS15790;Name=AL60_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15790;old_locus_tag=AL60_02070 NZ_KK316850.1 Protein Homology CDS 331963 332883 . + 0 ID=cds-WP_003401404.1;Parent=gene-AL60_RS15790;Dbxref=GenBank:WP_003401404.1;Name=WP_003401404.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214790.1;locus_tag=AL60_RS15790;product=oxygenase MpaB family protein;protein_id=WP_003401404.1;transl_table=11 NZ_KK316850.1 RefSeq gene 332923 333351 . - . ID=gene-AL60_RS15795;Name=AL60_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15795;old_locus_tag=AL60_02071 NZ_KK316850.1 Protein Homology CDS 332923 333351 . - 0 ID=cds-WP_003401406.1;Parent=gene-AL60_RS15795;Dbxref=GenBank:WP_003401406.1;Name=WP_003401406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214791.1;locus_tag=AL60_RS15795;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003401406.1;transl_table=11 NZ_KK316850.1 RefSeq pseudogene 333375 333632 . - . ID=gene-AL60_RS15800;Name=vapB25;gbkey=Gene;gene=vapB25;gene_biotype=pseudogene;locus_tag=AL60_RS15800;old_locus_tag=AL60_02072;pseudo=true NZ_KK316850.1 Protein Homology CDS 333375 333632 . - 0 ID=cds-AL60_RS15800;Parent=gene-AL60_RS15800;Note=internal stop;gbkey=CDS;gene=vapB25;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215262.1;locus_tag=AL60_RS15800;product=type II toxin-antitoxin system antitoxin vapB25;pseudo=true;transl_table=11 NZ_KK316850.1 RefSeq gene 333652 336273 . - . ID=gene-AL60_RS15805;Name=AL60_RS15805;end_range=336273,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15805;old_locus_tag=AL60_02073;partial=true NZ_KK316850.1 Protein Homology CDS 333652 336273 . - 0 ID=cds-WP_031721502.1;Parent=gene-AL60_RS15805;Dbxref=GenBank:WP_031721502.1;Name=WP_031721502.1;Ontology_term=GO:0005576,GO:0009986;end_range=336273,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177707.1;locus_tag=AL60_RS15805;partial=true;product=PE family protein;protein_id=WP_031721502.1;transl_table=11 ##sequence-region NZ_KK316851.1 1 330750 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316851.1 RefSeq region 1 330750 . + . ID=NZ_KK316851.1:1..330750;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316851.1 RefSeq gene 1 1721 . - . ID=gene-AL60_RS0104765;Name=AL60_RS0104765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104765;partial=true;start_range=.,1 NZ_KK316851.1 Protein Homology CDS 1 1721 . - 0 ID=cds-WP_031659077.1;Parent=gene-AL60_RS0104765;Dbxref=GenBank:WP_031659077.1;Name=WP_031659077.1;Ontology_term=GO:0006633,GO:0030639,GO:0034081;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216564.2;locus_tag=AL60_RS0104765;partial=true;product=type I polyketide synthase;protein_id=WP_031659077.1;start_range=.,1;transl_table=11 NZ_KK316851.1 RefSeq gene 2028 2378 . - . ID=gene-AL60_RS27145;Name=AL60_RS27145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27145 NZ_KK316851.1 Protein Homology CDS 2028 2378 . - 0 ID=cds-WP_003912718.1;Parent=gene-AL60_RS27145;Dbxref=GenBank:WP_003912718.1;Name=WP_003912718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912718.1;locus_tag=AL60_RS27145;product=hypothetical protein;protein_id=WP_003912718.1;transl_table=11 NZ_KK316851.1 RefSeq gene 2556 2891 . + . ID=gene-AL60_RS15810;Name=rbpA;gbkey=Gene;gene=rbpA;gene_biotype=protein_coding;locus_tag=AL60_RS15810;old_locus_tag=AL60_02075 NZ_KK316851.1 Protein Homology CDS 2556 2891 . + 0 ID=cds-WP_003410601.1;Parent=gene-AL60_RS15810;Dbxref=GenBank:WP_003410601.1;Name=WP_003410601.1;gbkey=CDS;gene=rbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216566.1;locus_tag=AL60_RS15810;product=RNA polymerase-binding protein RbpA;protein_id=WP_003410601.1;transl_table=11 NZ_KK316851.1 RefSeq gene 2866 5490 . - . ID=gene-AL60_RS25960;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AL60_RS25960;old_locus_tag=AL60_02076 NZ_KK316851.1 Protein Homology CDS 2866 5490 . - 0 ID=cds-WP_003902238.1;Parent=gene-AL60_RS25960;Dbxref=GenBank:WP_003902238.1;Name=WP_003902238.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216567.1;locus_tag=AL60_RS25960;product=apolipoprotein N-acyltransferase;protein_id=WP_003902238.1;transl_table=11 NZ_KK316851.1 RefSeq gene 5648 7252 . - . ID=gene-AL60_RS15815;Name=AL60_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15815;old_locus_tag=AL60_02077 NZ_KK316851.1 Protein Homology CDS 5648 7252 . - 0 ID=cds-WP_003410605.1;Parent=gene-AL60_RS15815;Dbxref=GenBank:WP_003410605.1;Name=WP_003410605.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216568.1;locus_tag=AL60_RS15815;product=amidohydrolase;protein_id=WP_003410605.1;transl_table=11 NZ_KK316851.1 RefSeq gene 7257 7784 . - . ID=gene-AL60_RS15820;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=AL60_RS15820;old_locus_tag=AL60_02078 NZ_KK316851.1 Protein Homology CDS 7257 7784 . - 0 ID=cds-WP_003410608.1;Parent=gene-AL60_RS15820;Dbxref=GenBank:WP_003410608.1;Name=WP_003410608.1;Ontology_term=GO:0005886;gbkey=CDS;gene=fxsA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216569.1;locus_tag=AL60_RS15820;product=FxsA family protein;protein_id=WP_003410608.1;transl_table=11 NZ_KK316851.1 RefSeq gene 7860 8573 . + . ID=gene-AL60_RS15825;Name=AL60_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15825;old_locus_tag=AL60_02079 NZ_KK316851.1 Protein Homology CDS 7860 8573 . + 0 ID=cds-WP_003410610.1;Parent=gene-AL60_RS15825;Dbxref=GenBank:WP_003410610.1;Name=WP_003410610.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216570.1;locus_tag=AL60_RS15825;product=dienelactone hydrolase family protein;protein_id=WP_003410610.1;transl_table=11 NZ_KK316851.1 RefSeq gene 8822 9088 . - . ID=gene-AL60_RS15830;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AL60_RS15830;old_locus_tag=AL60_02080 NZ_KK316851.1 Protein Homology CDS 8822 9088 . - 0 ID=cds-WP_003410619.1;Parent=gene-AL60_RS15830;Dbxref=GenBank:WP_003410619.1;Name=WP_003410619.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216571.1;locus_tag=AL60_RS15830;product=30S ribosomal protein S18;protein_id=WP_003410619.1;transl_table=11 NZ_KK316851.1 RefSeq gene 9089 9394 . - . ID=gene-AL60_RS15835;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AL60_RS15835;old_locus_tag=AL60_02081 NZ_KK316851.1 Protein Homology CDS 9089 9394 . - 0 ID=cds-WP_003410624.1;Parent=gene-AL60_RS15835;Dbxref=GenBank:WP_003410624.1;Name=WP_003410624.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216572.1;locus_tag=AL60_RS15835;product=30S ribosomal protein S14;protein_id=WP_003410624.1;transl_table=11 NZ_KK316851.1 RefSeq gene 9396 9560 . - . ID=gene-AL60_RS15840;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AL60_RS15840;old_locus_tag=AL60_02082 NZ_KK316851.1 Protein Homology CDS 9396 9560 . - 0 ID=cds-WP_003410628.1;Parent=gene-AL60_RS15840;Dbxref=GenBank:WP_003410628.1;Name=WP_003410628.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005063154.1;locus_tag=AL60_RS15840;product=50S ribosomal protein L33;protein_id=WP_003410628.1;transl_table=11 NZ_KK316851.1 RefSeq gene 9560 9796 . - . ID=gene-AL60_RS15845;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AL60_RS15845;old_locus_tag=AL60_02083 NZ_KK316851.1 Protein Homology CDS 9560 9796 . - 0 ID=cds-WP_003410631.1;Parent=gene-AL60_RS15845;Dbxref=GenBank:WP_003410631.1;Name=WP_003410631.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216574.1;locus_tag=AL60_RS15845;product=50S ribosomal protein L28;protein_id=WP_003410631.1;transl_table=11 NZ_KK316851.1 RefSeq pseudogene 10194 10883 . + . ID=gene-AL60_RS27555;Name=AL60_RS27555;end_range=10883,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27555;partial=true;pseudo=true NZ_KK316851.1 Protein Homology CDS 10194 10883 . + 0 ID=cds-AL60_RS27555;Parent=gene-AL60_RS27555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0046872;end_range=10883,.;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013465.6;locus_tag=AL60_RS27555;partial=true;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;pseudo=true;transl_table=11 NZ_KK316851.1 RefSeq gene 11023 11415 . + . ID=gene-AL60_RS27560;Name=AL60_RS27560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27560;old_locus_tag=AL60_02085 NZ_KK316851.1 Protein Homology CDS 11023 11415 . + 0 ID=cds-WP_229303073.1;Parent=gene-AL60_RS27560;Dbxref=GenBank:WP_229303073.1;Name=WP_229303073.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013143.6;locus_tag=AL60_RS27560;product=metal ABC transporter permease;protein_id=WP_229303073.1;transl_table=11 NZ_KK316851.1 RefSeq gene 11416 11820 . - . ID=gene-AL60_RS15855;Name=AL60_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15855;old_locus_tag=AL60_02086 NZ_KK316851.1 Protein Homology CDS 11416 11820 . - 0 ID=cds-WP_003410645.1;Parent=gene-AL60_RS15855;Dbxref=GenBank:WP_003410645.1;Name=WP_003410645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216577.1;locus_tag=AL60_RS15855;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003410645.1;transl_table=11 NZ_KK316851.1 RefSeq gene 11904 15488 . - . ID=gene-AL60_RS15860;Name=cobN;gbkey=Gene;gene=cobN;gene_biotype=protein_coding;locus_tag=AL60_RS15860;old_locus_tag=AL60_02087 NZ_KK316851.1 Protein Homology CDS 11904 15488 . - 0 ID=cds-WP_003410648.1;Parent=gene-AL60_RS15860;Dbxref=GenBank:WP_003410648.1;Name=WP_003410648.1;Ontology_term=GO:0009236,GO:0051116;gbkey=CDS;gene=cobN;go_function=cobaltochelatase activity|0051116||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216578.1;locus_tag=AL60_RS15860;product=cobaltochelatase subunit CobN;protein_id=WP_003410648.1;transl_table=11 NZ_KK316851.1 RefSeq gene 15566 15799 . + . ID=gene-AL60_RS15865;Name=mazE7;gbkey=Gene;gene=mazE7;gene_biotype=protein_coding;locus_tag=AL60_RS15865;old_locus_tag=AL60_02088 NZ_KK316851.1 Protein Homology CDS 15566 15799 . + 0 ID=cds-WP_003410651.1;Parent=gene-AL60_RS15865;Dbxref=GenBank:WP_003410651.1;Name=WP_003410651.1;gbkey=CDS;gene=mazE7;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177657.1;locus_tag=AL60_RS15865;product=type II toxin-antitoxin system antitoxin MazE7;protein_id=WP_003410651.1;transl_table=11 NZ_KK316851.1 RefSeq gene 15792 16202 . + . ID=gene-AL60_RS15870;Name=mazF7;gbkey=Gene;gene=mazF7;gene_biotype=protein_coding;gene_synonym=mazF-mt9;locus_tag=AL60_RS15870;old_locus_tag=AL60_02089 NZ_KK316851.1 Protein Homology CDS 15792 16202 . + 0 ID=cds-WP_003410654.1;Parent=gene-AL60_RS15870;Dbxref=GenBank:WP_003410654.1;Name=WP_003410654.1;gbkey=CDS;gene=mazF7;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837055.2;locus_tag=AL60_RS15870;product=type II toxin-antitoxin system toxin endoribonuclease MazF7;protein_id=WP_003410654.1;transl_table=11 NZ_KK316851.1 RefSeq gene 16186 17277 . + . ID=gene-AL60_RS15875;Name=cobG;gbkey=Gene;gene=cobG;gene_biotype=protein_coding;locus_tag=AL60_RS15875;old_locus_tag=AL60_02090 NZ_KK316851.1 Protein Homology CDS 16186 17277 . + 0 ID=cds-WP_003900454.1;Parent=gene-AL60_RS15875;Dbxref=GenBank:WP_003900454.1;Name=WP_003900454.1;Ontology_term=GO:0019250,GO:0016709;gbkey=CDS;gene=cobG;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=aerobic cobalamin biosynthetic process|0019250||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216580.1;locus_tag=AL60_RS15875;product=precorrin-3B synthase;protein_id=WP_003900454.1;transl_table=11 NZ_KK316851.1 RefSeq gene 17287 17913 . + . ID=gene-AL60_RS15880;Name=cobH;gbkey=Gene;gene=cobH;gene_biotype=protein_coding;locus_tag=AL60_RS15880;old_locus_tag=AL60_02091 NZ_KK316851.1 Protein Homology CDS 17287 17913 . + 0 ID=cds-WP_003410658.1;Parent=gene-AL60_RS15880;Dbxref=GenBank:WP_003410658.1;Name=WP_003410658.1;Ontology_term=GO:0009236,GO:0016993;gbkey=CDS;gene=cobH;go_function=precorrin-8X methylmutase activity|0016993||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216581.1;locus_tag=AL60_RS15880;product=precorrin-8X methylmutase;protein_id=WP_003410658.1;transl_table=11 NZ_KK316851.1 RefSeq gene 17910 19436 . + . ID=gene-AL60_RS15885;Name=cobI;gbkey=Gene;gene=cobI;gene_biotype=protein_coding;locus_tag=AL60_RS15885;old_locus_tag=AL60_02092 NZ_KK316851.1 Protein Homology CDS 17910 19436 . + 0 ID=cds-WP_003410659.1;Parent=gene-AL60_RS15885;Dbxref=GenBank:WP_003410659.1;Name=WP_003410659.1;Ontology_term=GO:0009236,GO:0030788;gbkey=CDS;gene=cobI;go_function=precorrin-2 C20-methyltransferase activity|0030788||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216582.1;locus_tag=AL60_RS15885;product=precorrin-2 C(20)-methyltransferase;protein_id=WP_003410659.1;transl_table=11 NZ_KK316851.1 RefSeq gene 19382 20605 . - . ID=gene-AL60_RS15890;Name=AL60_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15890;old_locus_tag=AL60_02093 NZ_KK316851.1 Protein Homology CDS 19382 20605 . - 0 ID=cds-WP_003901321.1;Parent=gene-AL60_RS15890;Dbxref=GenBank:WP_003901321.1;Name=WP_003901321.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216583.1;locus_tag=AL60_RS15890;product=class I SAM-dependent methyltransferase;protein_id=WP_003901321.1;transl_table=11 NZ_KK316851.1 RefSeq gene 20621 21544 . - . ID=gene-AL60_RS15895;Name=blaC;gbkey=Gene;gene=blaC;gene_biotype=protein_coding;locus_tag=AL60_RS15895;old_locus_tag=AL60_02094 NZ_KK316851.1 Protein Homology CDS 20621 21544 . - 0 ID=cds-WP_003410677.1;Parent=gene-AL60_RS15895;Dbxref=GenBank:WP_003410677.1;Name=WP_003410677.1;Ontology_term=GO:0008800;gbkey=CDS;gene=blaC;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410677.1;locus_tag=AL60_RS15895;product=class A beta-lactamase BlaC;protein_id=WP_003410677.1;transl_table=11 NZ_KK316851.1 RefSeq gene 21679 22236 . + . ID=gene-AL60_RS15900;Name=sigC;gbkey=Gene;gene=sigC;gene_biotype=protein_coding;locus_tag=AL60_RS15900;old_locus_tag=AL60_02095 NZ_KK316851.1 Protein Homology CDS 21679 22236 . + 0 ID=cds-WP_003410678.1;Parent=gene-AL60_RS15900;Dbxref=GenBank:WP_003410678.1;Name=WP_003410678.1;gbkey=CDS;gene=sigC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216585.1;locus_tag=AL60_RS15900;product=RNA polymerase sigma factor SigC;protein_id=WP_003410678.1;transl_table=11 NZ_KK316851.1 RefSeq gene 22226 22960 . - . ID=gene-AL60_RS15905;Name=cobK;gbkey=Gene;gene=cobK;gene_biotype=protein_coding;locus_tag=AL60_RS15905;old_locus_tag=AL60_02096 NZ_KK316851.1 Protein Homology CDS 22226 22960 . - 0 ID=cds-WP_003900455.1;Parent=gene-AL60_RS15905;Dbxref=GenBank:WP_003900455.1;Name=WP_003900455.1;Ontology_term=GO:0009236,GO:0016994;gbkey=CDS;gene=cobK;go_function=precorrin-6A reductase activity|0016994||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216586.1;locus_tag=AL60_RS15905;product=cobalt-precorrin-6A reductase;protein_id=WP_003900455.1;transl_table=11 NZ_KK316851.1 RefSeq gene 22957 23712 . - . ID=gene-AL60_RS15910;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=AL60_RS15910;old_locus_tag=AL60_02097 NZ_KK316851.1 Protein Homology CDS 22957 23712 . - 0 ID=cds-WP_003906733.1;Parent=gene-AL60_RS15910;Dbxref=GenBank:WP_003906733.1;Name=WP_003906733.1;Ontology_term=GO:0009236,GO:0046026;gbkey=CDS;gene=cobM;go_function=precorrin-4 C11-methyltransferase activity|0046026||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216587.1;locus_tag=AL60_RS15910;product=precorrin-4 C(11)-methyltransferase;protein_id=WP_003906733.1;transl_table=11 NZ_KK316851.1 RefSeq gene 23709 24881 . - . ID=gene-AL60_RS15915;Name=cobL;gbkey=Gene;gene=cobL;gene_biotype=protein_coding;locus_tag=AL60_RS15915;old_locus_tag=AL60_02098 NZ_KK316851.1 Protein Homology CDS 23709 24881 . - 0 ID=cds-WP_003899155.1;Parent=gene-AL60_RS15915;Dbxref=GenBank:WP_003899155.1;Name=WP_003899155.1;gbkey=CDS;gene=cobL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216588.1;locus_tag=AL60_RS15915;product=bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_003899155.1;transl_table=11 NZ_KK316851.1 RefSeq gene 24949 25698 . - . ID=gene-AL60_RS15920;Name=AL60_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15920;old_locus_tag=AL60_02099 NZ_KK316851.1 Protein Homology CDS 24949 25698 . - 0 ID=cds-WP_003900457.1;Parent=gene-AL60_RS15920;Dbxref=GenBank:WP_003900457.1;Name=WP_003900457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216589.1;locus_tag=AL60_RS15920;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003900457.1;transl_table=11 NZ_KK316851.1 RefSeq gene 25728 26141 . + . ID=gene-AL60_RS15925;Name=AL60_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15925;old_locus_tag=AL60_02100 NZ_KK316851.1 Protein Homology CDS 25728 26141 . + 0 ID=cds-WP_003899157.1;Parent=gene-AL60_RS15925;Dbxref=GenBank:WP_003899157.1;Name=WP_003899157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216590.1;locus_tag=AL60_RS15925;product=F420-dependent biliverdin reductase;protein_id=WP_003899157.1;transl_table=11 NZ_KK316851.1 RefSeq gene 26151 27614 . - . ID=gene-AL60_RS15930;Name=AL60_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15930;old_locus_tag=AL60_02101 NZ_KK316851.1 Protein Homology CDS 26151 27614 . - 0 ID=cds-WP_003899158.1;Parent=gene-AL60_RS15930;Dbxref=GenBank:WP_003899158.1;Name=WP_003899158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216591.1;locus_tag=AL60_RS15930;product=phosphoinositide-specific phospholipase C-related protein;protein_id=WP_003899158.1;transl_table=11 NZ_KK316851.1 RefSeq gene 28058 29029 . - . ID=gene-AL60_RS15940;Name=AL60_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15940;old_locus_tag=AL60_02103 NZ_KK316851.1 Protein Homology CDS 28058 29029 . - 0 ID=cds-WP_003899159.1;Parent=gene-AL60_RS15940;Dbxref=GenBank:WP_003899159.1;Name=WP_003899159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216593.1;locus_tag=AL60_RS15940;product=hypothetical protein;protein_id=WP_003899159.1;transl_table=11 NZ_KK316851.1 RefSeq gene 29030 29329 . - . ID=gene-AL60_RS15945;Name=AL60_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15945;old_locus_tag=AL60_02104 NZ_KK316851.1 Protein Homology CDS 29030 29329 . - 0 ID=cds-WP_003410695.1;Parent=gene-AL60_RS15945;Dbxref=GenBank:WP_003410695.1;Name=WP_003410695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177658.1;locus_tag=AL60_RS15945;product=hypothetical protein;protein_id=WP_003410695.1;transl_table=11 NZ_KK316851.1 RefSeq gene 29463 29730 . + . ID=gene-AL60_RS15950;Name=AL60_RS15950;end_range=29730,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15950;old_locus_tag=AL60_02105;partial=true NZ_KK316851.1 Protein Homology CDS 29463 29730 . + 0 ID=cds-WP_031650639.1;Parent=gene-AL60_RS15950;Dbxref=GenBank:WP_031650639.1;Name=WP_031650639.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=29730,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS15950;partial=true;product=transposase;protein_id=WP_031650639.1;transl_table=11 NZ_KK316851.1 RefSeq gene 33445 33681 . + . ID=gene-AL60_RS15955;Name=AL60_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15955;old_locus_tag=AL60_02106;partial=true;start_range=.,33445 NZ_KK316851.1 Protein Homology CDS 33445 33681 . + 0 ID=cds-WP_017351286.1;Parent=gene-AL60_RS15955;Dbxref=GenBank:WP_017351286.1;Name=WP_017351286.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS15955;partial=true;product=integrase core domain-containing protein;protein_id=WP_017351286.1;start_range=.,33445;transl_table=11 NZ_KK316851.1 RefSeq gene 34109 34423 . + . ID=gene-AL60_RS15960;Name=AL60_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15960;old_locus_tag=AL60_02108 NZ_KK316851.1 Protein Homology CDS 34109 34423 . + 0 ID=cds-WP_003410700.1;Parent=gene-AL60_RS15960;Dbxref=GenBank:WP_003410700.1;Name=WP_003410700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216594.1;locus_tag=AL60_RS15960;product=DUF2563 family protein;protein_id=WP_003410700.1;transl_table=11 NZ_KK316851.1 RefSeq gene 34405 36375 . + . ID=gene-AL60_RS15965;Name=AL60_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15965;old_locus_tag=AL60_02109 NZ_KK316851.1 Protein Homology CDS 34405 36375 . + 0 ID=cds-WP_003410703.1;Parent=gene-AL60_RS15965;Dbxref=GenBank:WP_003410703.1;Name=WP_003410703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216595.1;locus_tag=AL60_RS15965;product=putative alpha/beta hydrolase;protein_id=WP_003410703.1;transl_table=11 NZ_KK316851.1 RefSeq gene 36356 36919 . + . ID=gene-AL60_RS15970;Name=AL60_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15970;old_locus_tag=AL60_02110 NZ_KK316851.1 Protein Homology CDS 36356 36919 . + 0 ID=cds-WP_003899161.1;Parent=gene-AL60_RS15970;Dbxref=GenBank:WP_003899161.1;Name=WP_003899161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216596.1;locus_tag=AL60_RS15970;product=hypothetical protein;protein_id=WP_003899161.1;transl_table=11 NZ_KK316851.1 RefSeq pseudogene 36984 37148 . + . ID=gene-AL60_RS27565;Name=AL60_RS27565;end_range=37148,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27565;partial=true;pseudo=true;start_range=.,36984 NZ_KK316851.1 Protein Homology CDS 36984 37148 . + 0 ID=cds-AL60_RS27565;Parent=gene-AL60_RS27565;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=37148,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216598.1;locus_tag=AL60_RS27565;partial=true;product=DUF5631 domain-containing protein;pseudo=true;start_range=.,36984;transl_table=11 NZ_KK316851.1 RefSeq pseudogene 37115 37496 . - . ID=gene-AL60_RS27570;Name=AL60_RS27570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27570;old_locus_tag=AL60_02111;pseudo=true NZ_KK316851.1 Protein Homology CDS 37115 37496 . - 0 ID=cds-AL60_RS27570;Parent=gene-AL60_RS27570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216597.1;locus_tag=AL60_RS27570;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316851.1 RefSeq gene 37378 37770 . + . ID=gene-AL60_RS27155;Name=AL60_RS27155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27155 NZ_KK316851.1 Protein Homology CDS 37378 37770 . + 0 ID=cds-WP_223695514.1;Parent=gene-AL60_RS27155;Dbxref=GenBank:WP_223695514.1;Name=WP_223695514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909575.1;locus_tag=AL60_RS27155;product=hypothetical protein;protein_id=WP_223695514.1;transl_table=11 NZ_KK316851.1 RefSeq gene 37760 39925 . + . ID=gene-AL60_RS15975;Name=AL60_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15975;old_locus_tag=AL60_02112 NZ_KK316851.1 Protein Homology CDS 37760 39925 . + 0 ID=cds-WP_003913316.1;Parent=gene-AL60_RS15975;Dbxref=GenBank:WP_003913316.1;Name=WP_003913316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216598.1;locus_tag=AL60_RS15975;product=DUF5631 domain-containing protein;protein_id=WP_003913316.1;transl_table=11 NZ_KK316851.1 RefSeq gene 39922 40866 . + . ID=gene-AL60_RS15980;Name=AL60_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS15980;old_locus_tag=AL60_02113 NZ_KK316851.1 Protein Homology CDS 39922 40866 . + 0 ID=cds-WP_003900461.1;Parent=gene-AL60_RS15980;Dbxref=GenBank:WP_003900461.1;Name=WP_003900461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216599.1;locus_tag=AL60_RS15980;product=hypothetical protein;protein_id=WP_003900461.1;transl_table=11 NZ_KK316851.1 RefSeq gene 40859 41995 . + . ID=gene-AL60_RS26865;Name=AL60_RS26865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26865;old_locus_tag=AL60_02114 NZ_KK316851.1 Protein Homology CDS 40859 41995 . + 0 ID=cds-WP_003900462.1;Parent=gene-AL60_RS26865;Dbxref=GenBank:WP_003900462.1;Name=WP_003900462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216600.1;locus_tag=AL60_RS26865;product=hypothetical protein;protein_id=WP_003900462.1;transl_table=11 NZ_KK316851.1 RefSeq pseudogene 42198 43275 . + . ID=gene-AL60_RS27575;Name=AL60_RS27575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27575;partial=true;pseudo=true;start_range=.,42198 NZ_KK316851.1 Protein Homology CDS 42198 43275 . + 0 ID=cds-AL60_RS27575;Parent=gene-AL60_RS27575;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611776.1;locus_tag=AL60_RS27575;partial=true;product=IS3-like element ISMyma10 family transposase;pseudo=true;start_range=.,42198;transl_table=11 NZ_KK316851.1 RefSeq gene 43462 45231 . + . ID=gene-AL60_RS16005;Name=pknJ;gbkey=Gene;gene=pknJ;gene_biotype=protein_coding;locus_tag=AL60_RS16005;old_locus_tag=AL60_02118 NZ_KK316851.1 Protein Homology CDS 43462 45231 . + 0 ID=cds-WP_003410735.1;Parent=gene-AL60_RS16005;Dbxref=GenBank:WP_003410735.1;Name=WP_003410735.1;gbkey=CDS;gene=pknJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216604.1;locus_tag=AL60_RS16005;product=serine/threonine protein kinase PknJ;protein_id=WP_003410735.1;transl_table=11 NZ_KK316851.1 RefSeq gene 45248 46375 . - . ID=gene-AL60_RS16010;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=AL60_RS16010;old_locus_tag=AL60_02119 NZ_KK316851.1 Protein Homology CDS 45248 46375 . - 0 ID=cds-WP_003410743.1;Parent=gene-AL60_RS16010;Dbxref=GenBank:WP_003410743.1;Name=WP_003410743.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;gene=pepE;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216605.1;locus_tag=AL60_RS16010;product=M24 family metallopeptidase;protein_id=WP_003410743.1;transl_table=11 NZ_KK316851.1 RefSeq gene 46592 47548 . + . ID=gene-AL60_RS16015;Name=AL60_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16015;old_locus_tag=AL60_02120 NZ_KK316851.1 Protein Homology CDS 46592 47548 . + 0 ID=cds-WP_003410750.1;Parent=gene-AL60_RS16015;Dbxref=GenBank:WP_003410750.1;Name=WP_003410750.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016705407.1;locus_tag=AL60_RS16015;product=5'-3' exonuclease;protein_id=WP_003410750.1;transl_table=11 NZ_KK316851.1 RefSeq gene 47552 48286 . - . ID=gene-AL60_RS16020;Name=AL60_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16020;old_locus_tag=AL60_02121 NZ_KK316851.1 Protein Homology CDS 47552 48286 . - 0 ID=cds-WP_003410762.1;Parent=gene-AL60_RS16020;Dbxref=GenBank:WP_003410762.1;Name=WP_003410762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216607.1;locus_tag=AL60_RS16020;product=DUF4333 domain-containing protein;protein_id=WP_003410762.1;transl_table=11 NZ_KK316851.1 RefSeq gene 48328 51048 . - . ID=gene-AL60_RS16025;Name=helY;gbkey=Gene;gene=helY;gene_biotype=protein_coding;locus_tag=AL60_RS16025;old_locus_tag=AL60_02122 NZ_KK316851.1 Protein Homology CDS 48328 51048 . - 0 ID=cds-WP_003899167.1;Parent=gene-AL60_RS16025;Dbxref=GenBank:WP_003899167.1;Name=WP_003899167.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=helY;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216608.1;locus_tag=AL60_RS16025;product=DEAD/DEAH box helicase;protein_id=WP_003899167.1;transl_table=11 NZ_KK316851.1 RefSeq gene 51165 52091 . - . ID=gene-AL60_RS16030;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=AL60_RS16030;old_locus_tag=AL60_02123 NZ_KK316851.1 Protein Homology CDS 51165 52091 . - 0 ID=cds-WP_003410764.1;Parent=gene-AL60_RS16030;Dbxref=GenBank:WP_003410764.1;Name=WP_003410764.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216609.1;locus_tag=AL60_RS16030;product=twin-arginine translocase subunit TatC;protein_id=WP_003410764.1;transl_table=11 NZ_KK316851.1 RefSeq gene 52108 52359 . - . ID=gene-AL60_RS16035;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AL60_RS16035;old_locus_tag=AL60_02124 NZ_KK316851.1 Protein Homology CDS 52108 52359 . - 0 ID=cds-WP_003410768.1;Parent=gene-AL60_RS16035;Dbxref=GenBank:WP_003410768.1;Name=WP_003410768.1;Ontology_term=GO:0043953,GO:0016020;gbkey=CDS;gene=tatA;go_component=membrane|0016020||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216610.1;locus_tag=AL60_RS16035;product=Sec-independent protein translocase subunit TatA;protein_id=WP_003410768.1;transl_table=11 NZ_KK316851.1 RefSeq gene 52427 53377 . - . ID=gene-AL60_RS16040;Name=pafC;gbkey=Gene;gene=pafC;gene_biotype=protein_coding;locus_tag=AL60_RS16040;old_locus_tag=AL60_02125 NZ_KK316851.1 Protein Homology CDS 52427 53377 . - 0 ID=cds-WP_003410772.1;Parent=gene-AL60_RS16040;Dbxref=GenBank:WP_003410772.1;Name=WP_003410772.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=pafC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216611.1;locus_tag=AL60_RS16040;product=helix-turn-helix transcriptional regulator;protein_id=WP_003410772.1;transl_table=11 NZ_KK316851.1 RefSeq gene 53374 54372 . - . ID=gene-AL60_RS16045;Name=pafB;gbkey=Gene;gene=pafB;gene_biotype=protein_coding;locus_tag=AL60_RS16045;old_locus_tag=AL60_02126 NZ_KK316851.1 Protein Homology CDS 53374 54372 . - 0 ID=cds-WP_003410775.1;Parent=gene-AL60_RS16045;Dbxref=GenBank:WP_003410775.1;Name=WP_003410775.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=pafB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216612.1;locus_tag=AL60_RS16045;product=helix-turn-helix transcriptional regulator;protein_id=WP_003410775.1;transl_table=11 NZ_KK316851.1 RefSeq gene 54381 55739 . - . ID=gene-AL60_RS16050;Name=pafA;gbkey=Gene;gene=pafA;gene_biotype=protein_coding;locus_tag=AL60_RS16050;old_locus_tag=AL60_02127 NZ_KK316851.1 Protein Homology CDS 54381 55739 . - 0 ID=cds-WP_003410781.1;Parent=gene-AL60_RS16050;Dbxref=GenBank:WP_003410781.1;Name=WP_003410781.1;Ontology_term=GO:0010498,GO:0019941,GO:0070490,GO:0016879;gbkey=CDS;gene=pafA;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=proteasomal protein catabolic process|0010498||IEA,modification-dependent protein catabolic process|0019941||IEA,protein pupylation|0070490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216613.1;locus_tag=AL60_RS16050;product=Pup--protein ligase;protein_id=WP_003410781.1;transl_table=11 NZ_KK316851.1 RefSeq gene 55791 56960 . - . ID=gene-AL60_RS16055;Name=AL60_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16055;old_locus_tag=AL60_02128 NZ_KK316851.1 Protein Homology CDS 55791 56960 . - 0 ID=cds-WP_009937730.1;Parent=gene-AL60_RS16055;Dbxref=GenBank:WP_009937730.1;Name=WP_009937730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009937730.1;locus_tag=AL60_RS16055;product=PGRS repeat-containing protein;protein_id=WP_009937730.1;transl_table=11 NZ_KK316851.1 RefSeq pseudogene 57045 57265 . - . ID=gene-AL60_RS27920;Name=AL60_RS27920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27920;old_locus_tag=AL60_02129;partial=true;pseudo=true;start_range=.,57045 NZ_KK316851.1 Protein Homology CDS 57045 57265 . - 0 ID=cds-AL60_RS27920;Parent=gene-AL60_RS27920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL60_RS27920;partial=true;product=PE family protein;pseudo=true;start_range=.,57045;transl_table=11 NZ_KK316851.1 RefSeq gene 57562 59100 . + . ID=gene-AL60_RS16060;Name=AL60_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16060;old_locus_tag=AL60_02130 NZ_KK316851.1 Protein Homology CDS 57562 59100 . + 0 ID=cds-WP_023637436.1;Parent=gene-AL60_RS16060;Dbxref=GenBank:WP_023637436.1;Name=WP_023637436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003926636.1;locus_tag=AL60_RS16060;product=HNH endonuclease signature motif containing protein;protein_id=WP_023637436.1;transl_table=11 NZ_KK316851.1 RefSeq gene 59299 62340 . + . ID=gene-AL60_RS16065;Name=helZ;gbkey=Gene;gene=helZ;gene_biotype=protein_coding;locus_tag=AL60_RS16065;old_locus_tag=AL60_02131 NZ_KK316851.1 Protein Homology CDS 59299 62340 . + 0 ID=cds-WP_003899171.1;Parent=gene-AL60_RS16065;Dbxref=GenBank:WP_003899171.1;Name=WP_003899171.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=helZ;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216617.2;locus_tag=AL60_RS16065;product=DEAD/DEAH box helicase;protein_id=WP_003899171.1;transl_table=11 NZ_KK316851.1 RefSeq gene 62333 63166 . + . ID=gene-AL60_RS16070;Name=AL60_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16070;old_locus_tag=AL60_02132 NZ_KK316851.1 Protein Homology CDS 62333 63166 . + 0 ID=cds-WP_003899172.1;Parent=gene-AL60_RS16070;Dbxref=GenBank:WP_003899172.1;Name=WP_003899172.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351184.1;locus_tag=AL60_RS16070;product=SWIM zinc finger family protein;protein_id=WP_003899172.1;transl_table=11 NZ_KK316851.1 RefSeq gene 63145 63579 . - . ID=gene-AL60_RS16075;Name=AL60_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16075;old_locus_tag=AL60_02133 NZ_KK316851.1 Protein Homology CDS 63145 63579 . - 0 ID=cds-WP_003410811.1;Parent=gene-AL60_RS16075;Dbxref=GenBank:WP_003410811.1;Name=WP_003410811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216619.1;locus_tag=AL60_RS16075;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003410811.1;transl_table=11 NZ_KK316851.1 RefSeq gene 63586 63840 . - . ID=gene-AL60_RS16080;Name=AL60_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16080;old_locus_tag=AL60_02134 NZ_KK316851.1 Protein Homology CDS 63586 63840 . - 0 ID=cds-WP_003410814.1;Parent=gene-AL60_RS16080;Dbxref=GenBank:WP_003410814.1;Name=WP_003410814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216620.1;locus_tag=AL60_RS16080;product=antitoxin;protein_id=WP_003410814.1;transl_table=11 NZ_KK316851.1 RefSeq gene 63856 64113 . - . ID=gene-AL60_RS0104810;Name=AL60_RS0104810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104810 NZ_KK316851.1 Protein Homology CDS 63856 64113 . - 0 ID=cds-WP_003410816.1;Parent=gene-AL60_RS0104810;Dbxref=GenBank:WP_003410816.1;Name=WP_003410816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030035.1;locus_tag=AL60_RS0104810;product=hypothetical protein;protein_id=WP_003410816.1;transl_table=11 NZ_KK316851.1 RefSeq gene 65060 65356 . + . ID=gene-AL60_RS16085;Name=AL60_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16085;old_locus_tag=AL60_02135 NZ_KK316851.1 Protein Homology CDS 65060 65356 . + 0 ID=cds-WP_003410820.1;Parent=gene-AL60_RS16085;Dbxref=GenBank:WP_003410820.1;Name=WP_003410820.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177858.1;locus_tag=AL60_RS16085;product=PE family protein;protein_id=WP_003410820.1;transl_table=11 NZ_KK316851.1 RefSeq gene 65412 66143 . + . ID=gene-AL60_RS16090;Name=AL60_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16090;old_locus_tag=AL60_02136 NZ_KK316851.1 Protein Homology CDS 65412 66143 . + 0 ID=cds-WP_003900467.1;Parent=gene-AL60_RS16090;Dbxref=GenBank:WP_003900467.1;Name=WP_003900467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177859.1;locus_tag=AL60_RS16090;product=PPE family protein;protein_id=WP_003900467.1;transl_table=11 NZ_KK316851.1 RefSeq gene 66683 67429 . - . ID=gene-AL60_RS16095;Name=prcA;gbkey=Gene;gene=prcA;gene_biotype=protein_coding;locus_tag=AL60_RS16095;old_locus_tag=AL60_02137 NZ_KK316851.1 Protein Homology CDS 66683 67429 . - 0 ID=cds-WP_003906749.1;Parent=gene-AL60_RS16095;Dbxref=GenBank:WP_003906749.1;Name=WP_003906749.1;Ontology_term=GO:0051603,GO:0004298,GO:0019773;gbkey=CDS;gene=prcA;go_component=proteasome core complex%2C alpha-subunit complex|0019773||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216625.1;locus_tag=AL60_RS16095;product=proteasome subunit alpha;protein_id=WP_003906749.1;transl_table=11 NZ_KK316851.1 RefSeq gene 67426 68301 . - . ID=gene-AL60_RS16100;Name=prcB;gbkey=Gene;gene=prcB;gene_biotype=protein_coding;locus_tag=AL60_RS16100;old_locus_tag=AL60_02138 NZ_KK316851.1 Protein Homology CDS 67426 68301 . - 0 ID=cds-WP_003411023.1;Parent=gene-AL60_RS16100;Dbxref=GenBank:WP_003411023.1;Name=WP_003411023.1;Ontology_term=GO:0010498,GO:0004298,GO:0005839;gbkey=CDS;gene=prcB;go_component=proteasome core complex|0005839||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteasomal protein catabolic process|0010498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216626.1;locus_tag=AL60_RS16100;product=proteasome subunit beta;protein_id=WP_003411023.1;transl_table=11 NZ_KK316851.1 RefSeq gene 68298 68492 . - . ID=gene-AL60_RS16105;Name=pup;gbkey=Gene;gene=pup;gene_biotype=protein_coding;locus_tag=AL60_RS16105;old_locus_tag=AL60_02139 NZ_KK316851.1 Protein Homology CDS 68298 68492 . - 0 ID=cds-WP_003411026.1;Parent=gene-AL60_RS16105;Dbxref=GenBank:WP_003411026.1;Name=WP_003411026.1;Ontology_term=GO:0010498,GO:0019941,GO:0070490,GO:0031386,GO:0070628;gbkey=CDS;gene=pup;go_function=protein tag activity|0031386||IEA,proteasome binding|0070628||IEA;go_process=proteasomal protein catabolic process|0010498||IEA,modification-dependent protein catabolic process|0019941||IEA,protein pupylation|0070490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003887572.1;locus_tag=AL60_RS16105;product=ubiquitin-like protein Pup;protein_id=WP_003411026.1;transl_table=11 NZ_KK316851.1 RefSeq gene 68605 70122 . - . ID=gene-AL60_RS16110;Name=dop;gbkey=Gene;gene=dop;gene_biotype=protein_coding;locus_tag=AL60_RS16110;old_locus_tag=AL60_02140 NZ_KK316851.1 Protein Homology CDS 68605 70122 . - 0 ID=cds-WP_031685278.1;Parent=gene-AL60_RS16110;Dbxref=GenBank:WP_031685278.1;Name=WP_031685278.1;gbkey=CDS;gene=dop;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411029.1;locus_tag=AL60_RS16110;product=pup deamidase/depupylase;protein_id=WP_031685278.1;transl_table=11 NZ_KK316851.1 RefSeq gene 70330 71523 . + . ID=gene-AL60_RS16115;Name=AL60_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16115;old_locus_tag=AL60_02141 NZ_KK316851.1 Protein Homology CDS 70330 71523 . + 0 ID=cds-WP_003411031.1;Parent=gene-AL60_RS16115;Dbxref=GenBank:WP_003411031.1;Name=WP_003411031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216629.1;locus_tag=AL60_RS16115;product=integral membrane protein;protein_id=WP_003411031.1;transl_table=11 NZ_KK316851.1 RefSeq gene 71534 72157 . + . ID=gene-AL60_RS16120;Name=AL60_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16120;old_locus_tag=AL60_02142 NZ_KK316851.1 Protein Homology CDS 71534 72157 . + 0 ID=cds-WP_003411033.1;Parent=gene-AL60_RS16120;Dbxref=GenBank:WP_003411033.1;Name=WP_003411033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216630.1;locus_tag=AL60_RS16120;product=hypothetical protein;protein_id=WP_003411033.1;transl_table=11 NZ_KK316851.1 RefSeq gene 72161 73990 . - . ID=gene-AL60_RS16125;Name=arc;gbkey=Gene;gene=arc;gene_biotype=protein_coding;locus_tag=AL60_RS16125;old_locus_tag=AL60_02143 NZ_KK316851.1 Protein Homology CDS 72161 73990 . - 0 ID=cds-WP_003411035.1;Parent=gene-AL60_RS16125;Dbxref=GenBank:WP_003411035.1;Name=WP_003411035.1;Ontology_term=GO:0010498,GO:0019941,GO:0016887,GO:0000502;gbkey=CDS;gene=arc;go_component=proteasome complex|0000502||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=proteasomal protein catabolic process|0010498||IEA,modification-dependent protein catabolic process|0019941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216631.1;locus_tag=AL60_RS16125;product=proteasome ATPase;protein_id=WP_003411035.1;transl_table=11 NZ_KK316851.1 RefSeq gene 74271 74840 . + . ID=gene-AL60_RS16130;Name=AL60_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16130;old_locus_tag=AL60_02144 NZ_KK316851.1 Protein Homology CDS 74271 74840 . + 0 ID=cds-WP_003900470.1;Parent=gene-AL60_RS16130;Dbxref=GenBank:WP_003900470.1;Name=WP_003900470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216632.1;locus_tag=AL60_RS16130;product=lipoprotein LppK;protein_id=WP_003900470.1;transl_table=11 NZ_KK316851.1 RefSeq gene 74848 75141 . + . ID=gene-AL60_RS16135;Name=AL60_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16135;old_locus_tag=AL60_02145 NZ_KK316851.1 Protein Homology CDS 74848 75141 . + 0 ID=cds-WP_003411038.1;Parent=gene-AL60_RS16135;Dbxref=GenBank:WP_003411038.1;Name=WP_003411038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216633.1;locus_tag=AL60_RS16135;product=DUF503 domain-containing protein;protein_id=WP_003411038.1;transl_table=11 NZ_KK316851.1 RefSeq gene 75170 76012 . - . ID=gene-AL60_RS16140;Name=trmI;gbkey=Gene;gene=trmI;gene_biotype=protein_coding;locus_tag=AL60_RS16140;old_locus_tag=AL60_02146 NZ_KK316851.1 Protein Homology CDS 75170 76012 . - 0 ID=cds-WP_003411041.1;Parent=gene-AL60_RS16140;Dbxref=GenBank:WP_003411041.1;Name=WP_003411041.1;gbkey=CDS;gene=trmI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216634.1;locus_tag=AL60_RS16140;product=tRNA (adenine(58)-N(1))-methyltransferase TrmI;protein_id=WP_003411041.1;transl_table=11 NZ_KK316851.1 RefSeq gene 76086 76922 . + . ID=gene-AL60_RS16145;Name=AL60_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16145;old_locus_tag=AL60_02147 NZ_KK316851.1 Protein Homology CDS 76086 76922 . + 0 ID=cds-WP_003899178.1;Parent=gene-AL60_RS16145;Dbxref=GenBank:WP_003899178.1;Name=WP_003899178.1;Ontology_term=GO:0003677,GO:0003678,GO:0004518,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,nuclease activity|0004518||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216635.1;locus_tag=AL60_RS16145;product=RecB family exonuclease;protein_id=WP_003899178.1;transl_table=11 NZ_KK316851.1 RefSeq gene 76945 77427 . - . ID=gene-AL60_RS16150;Name=AL60_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16150;old_locus_tag=AL60_02148 NZ_KK316851.1 Protein Homology CDS 76945 77427 . - 0 ID=cds-WP_003900471.1;Parent=gene-AL60_RS16150;Dbxref=GenBank:WP_003900471.1;Name=WP_003900471.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216636.1;locus_tag=AL60_RS16150;product=glycine zipper 2TM domain-containing protein;protein_id=WP_003900471.1;transl_table=11 NZ_KK316851.1 RefSeq gene 77506 78360 . - . ID=gene-AL60_RS16155;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AL60_RS16155;old_locus_tag=AL60_02149 NZ_KK316851.1 Protein Homology CDS 77506 78360 . - 0 ID=cds-WP_003411047.1;Parent=gene-AL60_RS16155;Dbxref=GenBank:WP_003411047.1;Name=WP_003411047.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216637.1;locus_tag=AL60_RS16155;product=ATP phosphoribosyltransferase;protein_id=WP_003411047.1;transl_table=11 NZ_KK316851.1 RefSeq gene 78363 78644 . - . ID=gene-AL60_RS16160;Name=hisE;gbkey=Gene;gene=hisE;gene_biotype=protein_coding;locus_tag=AL60_RS16160;old_locus_tag=AL60_02150 NZ_KK316851.1 Protein Homology CDS 78363 78644 . - 0 ID=cds-WP_012054309.1;Parent=gene-AL60_RS16160;Dbxref=GenBank:WP_012054309.1;Name=WP_012054309.1;Ontology_term=GO:0004636;gbkey=CDS;gene=hisE;go_function=phosphoribosyl-ATP diphosphatase activity|0004636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177860.1;locus_tag=AL60_RS16160;product=phosphoribosyl-ATP diphosphatase;protein_id=WP_012054309.1;transl_table=11 NZ_KK316851.1 RefSeq pseudogene 78771 80190 . + . ID=gene-AL60_RS0104815;Name=AL60_RS0104815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0104815;old_locus_tag=AL60_02151;pseudo=true NZ_KK316851.1 Protein Homology CDS 78771 80190 . + 0 ID=cds-AL60_RS0104815;Parent=gene-AL60_RS0104815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177861.1;locus_tag=AL60_RS0104815;product=PPE domain-containing protein;pseudo=true;transl_table=11 NZ_KK316851.1 RefSeq gene 80187 83765 . - . ID=gene-AL60_RS16165;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=AL60_RS16165;old_locus_tag=AL60_02152 NZ_KK316851.1 Protein Homology CDS 80187 83765 . - 0 ID=cds-WP_003900472.1;Parent=gene-AL60_RS16165;Dbxref=GenBank:WP_003900472.1;Name=WP_003900472.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216640.1;locus_tag=AL60_RS16165;product=methionine synthase;protein_id=WP_003900472.1;transl_table=11 NZ_KK316851.1 RefSeq gene 83991 84869 . + . ID=gene-AL60_RS16170;Name=AL60_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16170;old_locus_tag=AL60_02153 NZ_KK316851.1 Protein Homology CDS 83991 84869 . + 0 ID=cds-WP_003411060.1;Parent=gene-AL60_RS16170;Dbxref=GenBank:WP_003411060.1;Name=WP_003411060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216641.1;locus_tag=AL60_RS16170;product=PAC2 family protein;protein_id=WP_003411060.1;transl_table=11 NZ_KK316851.1 RefSeq gene 84900 85670 . - . ID=gene-AL60_RS0104820;Name=AL60_RS0104820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104820;old_locus_tag=AL60_02154 NZ_KK316851.1 Protein Homology CDS 84900 85670 . - 0 ID=cds-WP_003411064.1;Parent=gene-AL60_RS0104820;Dbxref=GenBank:WP_003411064.1;Name=WP_003411064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177862.1;locus_tag=AL60_RS0104820;product=PGRS repeat-containing protein;protein_id=WP_003411064.1;transl_table=11 NZ_KK316851.1 RefSeq gene 85667 85873 . - . ID=gene-AL60_RS27825;Name=AL60_RS27825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27825 NZ_KK316851.1 Protein Homology CDS 85667 85873 . - 0 ID=cds-WP_050167243.1;Parent=gene-AL60_RS27825;Dbxref=GenBank:WP_050167243.1;Name=WP_050167243.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL60_RS27825;product=PE family protein;protein_id=WP_050167243.1;transl_table=11 NZ_KK316851.1 RefSeq gene 86314 87783 . + . ID=gene-AL60_RS16175;Name=AL60_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16175;old_locus_tag=AL60_02155 NZ_KK316851.1 Protein Homology CDS 86314 87783 . + 0 ID=cds-WP_003899182.1;Parent=gene-AL60_RS16175;Dbxref=GenBank:WP_003899182.1;Name=WP_003899182.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177863.1;locus_tag=AL60_RS16175;product=amino acid permease;protein_id=WP_003899182.1;transl_table=11 NZ_KK316851.1 RefSeq gene 87783 87986 . + . ID=gene-AL60_RS16180;Name=AL60_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16180;old_locus_tag=AL60_02156 NZ_KK316851.1 Protein Homology CDS 87783 87986 . + 0 ID=cds-WP_003411082.1;Parent=gene-AL60_RS16180;Dbxref=GenBank:WP_003411082.1;Name=WP_003411082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216644.1;locus_tag=AL60_RS16180;product=hypothetical protein;protein_id=WP_003411082.1;transl_table=11 NZ_KK316851.1 RefSeq gene 88006 88887 . - . ID=gene-AL60_RS16185;Name=AL60_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16185;old_locus_tag=AL60_02157 NZ_KK316851.1 Protein Homology CDS 88006 88887 . - 0 ID=cds-WP_003411086.1;Parent=gene-AL60_RS16185;Dbxref=GenBank:WP_003411086.1;Name=WP_003411086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216645.1;locus_tag=AL60_RS16185;product=SDR family oxidoreductase;protein_id=WP_003411086.1;transl_table=11 NZ_KK316851.1 RefSeq gene 88913 90157 . - . ID=gene-AL60_RS16190;Name=mshC;gbkey=Gene;gene=mshC;gene_biotype=protein_coding;locus_tag=AL60_RS16190;old_locus_tag=AL60_02158 NZ_KK316851.1 Protein Homology CDS 88913 90157 . - 0 ID=cds-WP_003411091.1;Parent=gene-AL60_RS16190;Dbxref=GenBank:WP_003411091.1;Name=WP_003411091.1;Ontology_term=GO:0010125,GO:0035446;gbkey=CDS;gene=mshC;go_function=cysteine-glucosaminylinositol ligase activity|0035446||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216646.1;locus_tag=AL60_RS16190;product=cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase;protein_id=WP_003411091.1;transl_table=11 NZ_KK316851.1 RefSeq gene 90215 91018 . - . ID=gene-AL60_RS16195;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=AL60_RS16195;old_locus_tag=AL60_02159 NZ_KK316851.1 Protein Homology CDS 90215 91018 . - 0 ID=cds-WP_003411096.1;Parent=gene-AL60_RS16195;Dbxref=GenBank:WP_003411096.1;Name=WP_003411096.1;gbkey=CDS;gene=cysQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216647.1;locus_tag=AL60_RS16195;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_003411096.1;transl_table=11 NZ_KK316851.1 RefSeq gene 91109 91339 . + . ID=gene-AL60_RS16200;Name=AL60_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16200;old_locus_tag=AL60_02160 NZ_KK316851.1 Protein Homology CDS 91109 91339 . + 0 ID=cds-WP_003411099.1;Parent=gene-AL60_RS16200;Dbxref=GenBank:WP_003411099.1;Name=WP_003411099.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216648.1;locus_tag=AL60_RS16200;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003411099.1;transl_table=11 NZ_KK316851.1 RefSeq gene 91549 92364 . - . ID=gene-AL60_RS16205;Name=AL60_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16205;old_locus_tag=AL60_02161 NZ_KK316851.1 Protein Homology CDS 91549 92364 . - 0 ID=cds-WP_003900473.1;Parent=gene-AL60_RS16205;Dbxref=GenBank:WP_003900473.1;Name=WP_003900473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019306174.1;locus_tag=AL60_RS16205;product=SCO1664 family protein;protein_id=WP_003900473.1;transl_table=11 NZ_KK316851.1 RefSeq gene 92348 92935 . - . ID=gene-AL60_RS16210;Name=AL60_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16210;old_locus_tag=AL60_02162 NZ_KK316851.1 Protein Homology CDS 92348 92935 . - 0 ID=cds-WP_003411102.1;Parent=gene-AL60_RS16210;Dbxref=GenBank:WP_003411102.1;Name=WP_003411102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007170405.1;locus_tag=AL60_RS16210;product=DUF3090 domain-containing protein;protein_id=WP_003411102.1;transl_table=11 NZ_KK316851.1 RefSeq gene 92999 93709 . - . ID=gene-AL60_RS16215;Name=AL60_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16215;old_locus_tag=AL60_02163 NZ_KK316851.1 Protein Homology CDS 92999 93709 . - 0 ID=cds-WP_003411103.1;Parent=gene-AL60_RS16215;Dbxref=GenBank:WP_003411103.1;Name=WP_003411103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216651.1;locus_tag=AL60_RS16215;product=histidine phosphatase family protein;protein_id=WP_003411103.1;transl_table=11 NZ_KK316851.1 RefSeq gene 93706 94536 . - . ID=gene-AL60_RS16220;Name=AL60_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16220;old_locus_tag=AL60_02164 NZ_KK316851.1 Protein Homology CDS 93706 94536 . - 0 ID=cds-WP_003411105.1;Parent=gene-AL60_RS16220;Dbxref=GenBank:WP_003411105.1;Name=WP_003411105.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216652.1;locus_tag=AL60_RS16220;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_003411105.1;transl_table=11 NZ_KK316851.1 RefSeq gene 94600 94908 . - . ID=gene-AL60_RS0104835;Name=AL60_RS0104835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104835;old_locus_tag=AL60_02165 NZ_KK316851.1 Protein Homology CDS 94600 94908 . - 0 ID=cds-WP_003899184.1;Parent=gene-AL60_RS0104835;Dbxref=GenBank:WP_003899184.1;Name=WP_003899184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872207.1;locus_tag=AL60_RS0104835;product=hypothetical protein;protein_id=WP_003899184.1;transl_table=11 NZ_KK316851.1 RefSeq gene 95028 96104 . + . ID=gene-AL60_RS16225;Name=lppL;gbkey=Gene;gene=lppL;gene_biotype=protein_coding;locus_tag=AL60_RS16225;old_locus_tag=AL60_02166 NZ_KK316851.1 Protein Homology CDS 95028 96104 . + 0 ID=cds-WP_003411110.1;Parent=gene-AL60_RS16225;Dbxref=GenBank:WP_003411110.1;Name=WP_003411110.1;gbkey=CDS;gene=lppL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216654.1;locus_tag=AL60_RS16225;product=YncE family protein;protein_id=WP_003411110.1;transl_table=11 NZ_KK316851.1 RefSeq gene 96101 96382 . + . ID=gene-AL60_RS0104840;Name=AL60_RS0104840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104840 NZ_KK316851.1 Protein Homology CDS 96101 96382 . + 0 ID=cds-WP_003411112.1;Parent=gene-AL60_RS0104840;Dbxref=GenBank:WP_003411112.1;Name=WP_003411112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019283661.1;locus_tag=AL60_RS0104840;product=DUF5703 family protein;protein_id=WP_003411112.1;transl_table=11 NZ_KK316851.1 RefSeq gene 96418 97491 . + . ID=gene-AL60_RS16230;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=AL60_RS16230;old_locus_tag=AL60_02167 NZ_KK316851.1 Protein Homology CDS 96418 97491 . + 0 ID=cds-WP_003411116.1;Parent=gene-AL60_RS16230;Dbxref=GenBank:WP_003411116.1;Name=WP_003411116.1;Ontology_term=GO:0006207,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216655.1;locus_tag=AL60_RS16230;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_003411116.1;transl_table=11 NZ_KK316851.1 RefSeq gene 97496 98026 . - . ID=gene-AL60_RS16235;Name=AL60_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16235;old_locus_tag=AL60_02168 NZ_KK316851.1 Protein Homology CDS 97496 98026 . - 0 ID=cds-WP_003411119.1;Parent=gene-AL60_RS16235;Dbxref=GenBank:WP_003411119.1;Name=WP_003411119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216656.1;locus_tag=AL60_RS16235;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_003411119.1;transl_table=11 NZ_KK316851.1 RefSeq gene 98074 99420 . - . ID=gene-AL60_RS16240;Name=AL60_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16240;old_locus_tag=AL60_02169 NZ_KK316851.1 Protein Homology CDS 98074 99420 . - 0 ID=cds-WP_003411121.1;Parent=gene-AL60_RS16240;Dbxref=GenBank:WP_003411121.1;Name=WP_003411121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177864.1;locus_tag=AL60_RS16240;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_003411121.1;transl_table=11 NZ_KK316851.1 RefSeq gene 99685 99770 . + . ID=gene-AL60_RS16245;Name=AL60_RS16245;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS16245;old_locus_tag=AL60_02170 NZ_KK316851.1 tRNAscan-SE tRNA 99685 99770 . + . ID=rna-AL60_RS16245;Parent=gene-AL60_RS16245;anticodon=(pos:99718..99720);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS16245;product=tRNA-Leu NZ_KK316851.1 tRNAscan-SE exon 99685 99770 . + . ID=exon-AL60_RS16245-1;Parent=rna-AL60_RS16245;anticodon=(pos:99718..99720);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS16245;product=tRNA-Leu NZ_KK316851.1 RefSeq gene 99891 100208 . - . ID=gene-AL60_RS16250;Name=AL60_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16250;old_locus_tag=AL60_02171 NZ_KK316851.1 Protein Homology CDS 99891 100208 . - 0 ID=cds-WP_003411124.1;Parent=gene-AL60_RS16250;Dbxref=GenBank:WP_003411124.1;Name=WP_003411124.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216658.1;locus_tag=AL60_RS16250;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003411124.1;transl_table=11 NZ_KK316851.1 RefSeq gene 100205 100420 . - . ID=gene-AL60_RS16255;Name=AL60_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16255;old_locus_tag=AL60_02172 NZ_KK316851.1 Protein Homology CDS 100205 100420 . - 0 ID=cds-WP_003411127.1;Parent=gene-AL60_RS16255;Dbxref=GenBank:WP_003411127.1;Name=WP_003411127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410825.1;locus_tag=AL60_RS16255;product=antitoxin ParD2;protein_id=WP_003411127.1;transl_table=11 NZ_KK316851.1 RefSeq gene 100675 101733 . + . ID=gene-AL60_RS0104845;Name=AL60_RS0104845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104845;old_locus_tag=AL60_02173 NZ_KK316851.1 Protein Homology CDS 100675 101733 . + 0 ID=cds-WP_003411129.1;Parent=gene-AL60_RS0104845;Dbxref=GenBank:WP_003411129.1;Name=WP_003411129.1;Ontology_term=GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216659.1;locus_tag=AL60_RS0104845;product=phosphoribosyltransferase;protein_id=WP_003411129.1;transl_table=11 NZ_KK316851.1 RefSeq gene 101863 102219 . - . ID=gene-AL60_RS16260;Name=AL60_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16260;old_locus_tag=AL60_02174 NZ_KK316851.1 Protein Homology CDS 101863 102219 . - 0 ID=cds-WP_003411130.1;Parent=gene-AL60_RS16260;Dbxref=GenBank:WP_003411130.1;Name=WP_003411130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216660.1;locus_tag=AL60_RS16260;product=hypothetical protein;protein_id=WP_003411130.1;transl_table=11 NZ_KK316851.1 RefSeq gene 102314 103096 . - . ID=gene-AL60_RS16265;Name=wag31;gbkey=Gene;gene=wag31;gene_biotype=protein_coding;locus_tag=AL60_RS16265;old_locus_tag=AL60_02175 NZ_KK316851.1 Protein Homology CDS 102314 103096 . - 0 ID=cds-WP_003411131.1;Parent=gene-AL60_RS16265;Dbxref=GenBank:WP_003411131.1;Name=WP_003411131.1;gbkey=CDS;gene=wag31;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216661.1;locus_tag=AL60_RS16265;product=DivIVA-like cell division protein Wag31;protein_id=WP_003411131.1;transl_table=11 NZ_KK316851.1 RefSeq gene 103364 103654 . - . ID=gene-AL60_RS16270;Name=AL60_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16270;old_locus_tag=AL60_02176 NZ_KK316851.1 Protein Homology CDS 103364 103654 . - 0 ID=cds-WP_003900476.1;Parent=gene-AL60_RS16270;Dbxref=GenBank:WP_003900476.1;Name=WP_003900476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216662.1;locus_tag=AL60_RS16270;product=YggT family protein;protein_id=WP_003900476.1;transl_table=11 NZ_KK316851.1 RefSeq gene 103816 104472 . - . ID=gene-AL60_RS16275;Name=sepF;gbkey=Gene;gene=sepF;gene_biotype=protein_coding;locus_tag=AL60_RS16275;old_locus_tag=AL60_02177 NZ_KK316851.1 Protein Homology CDS 103816 104472 . - 0 ID=cds-WP_003411133.1;Parent=gene-AL60_RS16275;Dbxref=GenBank:WP_003411133.1;Name=WP_003411133.1;gbkey=CDS;gene=sepF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878111.1;locus_tag=AL60_RS16275;product=cell division protein SepF;protein_id=WP_003411133.1;transl_table=11 NZ_KK316851.1 RefSeq gene 104538 105314 . - . ID=gene-AL60_RS16280;Name=AL60_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16280;old_locus_tag=AL60_02178 NZ_KK316851.1 Protein Homology CDS 104538 105314 . - 0 ID=cds-WP_003411137.1;Parent=gene-AL60_RS16280;Dbxref=GenBank:WP_003411137.1;Name=WP_003411137.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216664.1;locus_tag=AL60_RS16280;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_003411137.1;transl_table=11 NZ_KK316851.1 RefSeq gene 105320 106027 . - . ID=gene-AL60_RS16285;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=AL60_RS16285;old_locus_tag=AL60_02179 NZ_KK316851.1 Protein Homology CDS 105320 106027 . - 0 ID=cds-WP_003911777.1;Parent=gene-AL60_RS16285;Dbxref=GenBank:WP_003911777.1;Name=WP_003911777.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911777.1;locus_tag=AL60_RS16285;product=peptidoglycan editing factor PgeF;protein_id=WP_003911777.1;transl_table=11 NZ_KK316851.1 RefSeq gene 106083 107222 . - . ID=gene-AL60_RS16290;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AL60_RS16290;old_locus_tag=AL60_02180 NZ_KK316851.1 Protein Homology CDS 106083 107222 . - 0 ID=cds-WP_003411144.1;Parent=gene-AL60_RS16290;Dbxref=GenBank:WP_003411144.1;Name=WP_003411144.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216666.1;locus_tag=AL60_RS16290;product=cell division protein FtsZ;protein_id=WP_003411144.1;transl_table=11 NZ_KK316851.1 RefSeq gene 107395 108339 . - . ID=gene-AL60_RS16295;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=AL60_RS16295;old_locus_tag=AL60_02181 NZ_KK316851.1 Protein Homology CDS 107395 108339 . - 0 ID=cds-WP_003411157.1;Parent=gene-AL60_RS16295;Dbxref=GenBank:WP_003411157.1;Name=WP_003411157.1;gbkey=CDS;gene=ftsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216667.1;locus_tag=AL60_RS16295;product=cell division protein FtsQ;protein_id=WP_003411157.1;transl_table=11 NZ_KK316851.1 RefSeq gene 108336 109820 . - . ID=gene-AL60_RS16300;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AL60_RS16300;old_locus_tag=AL60_02182 NZ_KK316851.1 Protein Homology CDS 108336 109820 . - 0 ID=cds-WP_003411159.1;Parent=gene-AL60_RS16300;Dbxref=GenBank:WP_003411159.1;Name=WP_003411159.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216668.1;locus_tag=AL60_RS16300;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_003411159.1;transl_table=11 NZ_KK316851.1 RefSeq gene 109817 111049 . - . ID=gene-AL60_RS16305;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AL60_RS16305;old_locus_tag=AL60_02183 NZ_KK316851.1 Protein Homology CDS 109817 111049 . - 0 ID=cds-WP_012054311.1;Parent=gene-AL60_RS16305;Dbxref=GenBank:WP_012054311.1;Name=WP_012054311.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216669.1;locus_tag=AL60_RS16305;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_012054311.1;transl_table=11 NZ_KK316851.1 RefSeq gene 111046 112620 . - . ID=gene-AL60_RS16310;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AL60_RS16310;old_locus_tag=AL60_02184 NZ_KK316851.1 Protein Homology CDS 111046 112620 . - 0 ID=cds-WP_003411165.1;Parent=gene-AL60_RS16310;Dbxref=GenBank:WP_003411165.1;Name=WP_003411165.1;Ontology_term=GO:0009252,GO:0051301,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216670.1;locus_tag=AL60_RS16310;product=putative lipid II flippase FtsW;protein_id=WP_003411165.1;transl_table=11 NZ_KK316851.1 RefSeq gene 112632 114092 . - . ID=gene-AL60_RS16315;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AL60_RS16315;old_locus_tag=AL60_02185 NZ_KK316851.1 Protein Homology CDS 112632 114092 . - 0 ID=cds-WP_003901342.1;Parent=gene-AL60_RS16315;Dbxref=GenBank:WP_003901342.1;Name=WP_003901342.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216671.3;locus_tag=AL60_RS16315;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_003901342.1;transl_table=11 NZ_KK316851.1 RefSeq gene 114094 115173 . - . ID=gene-AL60_RS16320;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AL60_RS16320;old_locus_tag=AL60_02186 NZ_KK316851.1 Protein Homology CDS 114094 115173 . - 0 ID=cds-WP_003411171.1;Parent=gene-AL60_RS16320;Dbxref=GenBank:WP_003411171.1;Name=WP_003411171.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216672.1;locus_tag=AL60_RS16320;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_003411171.1;transl_table=11 NZ_KK316851.1 RefSeq gene 115170 116702 . - . ID=gene-AL60_RS16325;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AL60_RS16325;old_locus_tag=AL60_02187 NZ_KK316851.1 Protein Homology CDS 115170 116702 . - 0 ID=cds-WP_003411187.1;Parent=gene-AL60_RS16325;Dbxref=GenBank:WP_003411187.1;Name=WP_003411187.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216673.1;locus_tag=AL60_RS16325;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_003411187.1;transl_table=11 NZ_KK316851.1 RefSeq gene 116699 118306 . - . ID=gene-AL60_RS16330;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AL60_RS16330;old_locus_tag=AL60_02188 NZ_KK316851.1 Protein Homology CDS 116699 118306 . - 0 ID=cds-WP_003411189.1;Parent=gene-AL60_RS16330;Dbxref=GenBank:WP_003411189.1;Name=WP_003411189.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216674.1;locus_tag=AL60_RS16330;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_003411189.1;transl_table=11 NZ_KK316851.1 RefSeq gene 118329 119363 . - . ID=gene-AL60_RS16335;Name=AL60_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16335;old_locus_tag=AL60_02189 NZ_KK316851.1 Protein Homology CDS 118329 119363 . - 0 ID=cds-WP_003899194.1;Parent=gene-AL60_RS16335;Dbxref=GenBank:WP_003899194.1;Name=WP_003899194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216675.1;locus_tag=AL60_RS16335;product=alkyl hydroperoxide reductase;protein_id=WP_003899194.1;transl_table=11 NZ_KK316851.1 RefSeq gene 119360 119701 . - . ID=gene-AL60_RS27585;Name=AL60_RS27585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27585;old_locus_tag=AL60_02190 NZ_KK316851.1 Protein Homology CDS 119360 119701 . - 0 ID=cds-WP_003899195.1;Parent=gene-AL60_RS27585;Dbxref=GenBank:WP_003899195.1;Name=WP_003899195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899195.1;locus_tag=AL60_RS27585;product=TetR family transcriptional regulator C-terminal domain-containing protein;protein_id=WP_003899195.1;transl_table=11 NZ_KK316851.1 RefSeq pseudogene 119860 120012 . - . ID=gene-AL60_RS27925;Name=AL60_RS27925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27925;partial=true;pseudo=true;start_range=.,119860 NZ_KK316851.1 Protein Homology CDS 119860 120012 . - 0 ID=cds-AL60_RS27925;Parent=gene-AL60_RS27925;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.6;locus_tag=AL60_RS27925;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;start_range=.,119860;transl_table=11 NZ_KK316851.1 RefSeq gene 119969 120835 . - . ID=gene-AL60_RS16345;Name=AL60_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16345;old_locus_tag=AL60_02191 NZ_KK316851.1 Protein Homology CDS 119969 120835 . - 0 ID=cds-WP_003411201.1;Parent=gene-AL60_RS16345;Dbxref=GenBank:WP_003411201.1;Name=WP_003411201.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216677.1;locus_tag=AL60_RS16345;product=TIGR03619 family F420-dependent LLM class oxidoreductase;protein_id=WP_003411201.1;transl_table=11 NZ_KK316851.1 RefSeq gene 120938 122536 . - . ID=gene-AL60_RS16350;Name=AL60_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16350;old_locus_tag=AL60_02192 NZ_KK316851.1 Protein Homology CDS 120938 122536 . - 0 ID=cds-WP_031710374.1;Parent=gene-AL60_RS16350;Dbxref=GenBank:WP_031710374.1;Name=WP_031710374.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177865.1;locus_tag=AL60_RS16350;product=PE family protein;protein_id=WP_031710374.1;transl_table=11 NZ_KK316851.1 RefSeq gene 122746 124785 . - . ID=gene-AL60_RS16355;Name=pbpB;gbkey=Gene;gene=pbpB;gene_biotype=protein_coding;locus_tag=AL60_RS16355;old_locus_tag=AL60_02193 NZ_KK316851.1 Protein Homology CDS 122746 124785 . - 0 ID=cds-WP_003411214.1;Parent=gene-AL60_RS16355;Dbxref=GenBank:WP_003411214.1;Name=WP_003411214.1;gbkey=CDS;gene=pbpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216679.1;locus_tag=AL60_RS16355;product=D%2CD-transpeptidase PbpB;protein_id=WP_003411214.1;transl_table=11 NZ_KK316851.1 RefSeq gene 124782 125936 . - . ID=gene-AL60_RS16360;Name=AL60_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16360;old_locus_tag=AL60_02194 NZ_KK316851.1 Protein Homology CDS 124782 125936 . - 0 ID=cds-WP_003899197.1;Parent=gene-AL60_RS16360;Dbxref=GenBank:WP_003899197.1;Name=WP_003899197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216680.1;locus_tag=AL60_RS16360;product=cell division protein FtsL;protein_id=WP_003899197.1;transl_table=11 NZ_KK316851.1 RefSeq gene 125933 127123 . - . ID=gene-AL60_RS16365;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=AL60_RS16365;old_locus_tag=AL60_02195 NZ_KK316851.1 Protein Homology CDS 125933 127123 . - 0 ID=cds-WP_003411221.1;Parent=gene-AL60_RS16365;Dbxref=GenBank:WP_003411221.1;Name=WP_003411221.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216681.4;locus_tag=AL60_RS16365;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_003411221.1;transl_table=11 NZ_KK316851.1 RefSeq gene 127125 127556 . - . ID=gene-AL60_RS16370;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=AL60_RS16370;old_locus_tag=AL60_02196 NZ_KK316851.1 Protein Homology CDS 127125 127556 . - 0 ID=cds-WP_003411225.1;Parent=gene-AL60_RS16370;Dbxref=GenBank:WP_003411225.1;Name=WP_003411225.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216682.1;locus_tag=AL60_RS16370;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_003411225.1;transl_table=11 NZ_KK316851.1 RefSeq gene 127905 128309 . - . ID=gene-AL60_RS16375;Name=AL60_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16375;old_locus_tag=AL60_02197 NZ_KK316851.1 Protein Homology CDS 127905 128309 . - 0 ID=cds-WP_003411231.1;Parent=gene-AL60_RS16375;Dbxref=GenBank:WP_003411231.1;Name=WP_003411231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216685.1;locus_tag=AL60_RS16375;product=DUF3040 domain-containing protein;protein_id=WP_003411231.1;transl_table=11 NZ_KK316851.1 RefSeq gene 128575 129195 . + . ID=gene-AL60_RS16380;Name=AL60_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16380;old_locus_tag=AL60_02198 NZ_KK316851.1 Protein Homology CDS 128575 129195 . + 0 ID=cds-WP_003411235.1;Parent=gene-AL60_RS16380;Dbxref=GenBank:WP_003411235.1;Name=WP_003411235.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216686.1;locus_tag=AL60_RS16380;product=GNAT family N-acetyltransferase;protein_id=WP_003411235.1;transl_table=11 NZ_KK316851.1 RefSeq gene 129291 129974 . + . ID=gene-AL60_RS16385;Name=lppM;gbkey=Gene;gene=lppM;gene_biotype=protein_coding;locus_tag=AL60_RS16385;old_locus_tag=AL60_02199 NZ_KK316851.1 Protein Homology CDS 129291 129974 . + 0 ID=cds-WP_003411238.1;Parent=gene-AL60_RS16385;Dbxref=GenBank:WP_003411238.1;Name=WP_003411238.1;gbkey=CDS;gene=lppM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216687.1;locus_tag=AL60_RS16385;product=lipoprotein LppM;protein_id=WP_003411238.1;transl_table=11 NZ_KK316851.1 RefSeq gene 129971 130876 . - . ID=gene-AL60_RS16390;Name=AL60_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16390;old_locus_tag=AL60_02200 NZ_KK316851.1 Protein Homology CDS 129971 130876 . - 0 ID=cds-WP_003411241.1;Parent=gene-AL60_RS16390;Dbxref=GenBank:WP_003411241.1;Name=WP_003411241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216688.1;locus_tag=AL60_RS16390;product=mycobacterial-type methylenetetrahydrofolate reductase;protein_id=WP_003411241.1;transl_table=11 NZ_KK316851.1 RefSeq gene 131187 132245 . + . ID=gene-AL60_RS16395;Name=idsA2;gbkey=Gene;gene=idsA2;gene_biotype=protein_coding;locus_tag=AL60_RS16395;old_locus_tag=AL60_02201 NZ_KK316851.1 Protein Homology CDS 131187 132245 . + 0 ID=cds-WP_003411245.1;Parent=gene-AL60_RS16395;Dbxref=GenBank:WP_003411245.1;Name=WP_003411245.1;Ontology_term=GO:0008299,GO:0033384,GO:0004161,GO:0004337,GO:0004659;gbkey=CDS;gene=idsA2;go_function=dimethylallyltranstransferase activity|0004161||IEA,(2E%2C6E)-farnesyl diphosphate synthase activity|0004337||IEA,prenyltransferase activity|0004659||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,geranyl diphosphate biosynthetic process|0033384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216689.1;locus_tag=AL60_RS16395;product=bifunctional (2E%2C6E)-farnesyl/geranyl diphosphate synthase;protein_id=WP_003411245.1;transl_table=11 NZ_KK316851.1 RefSeq gene 132249 133799 . + . ID=gene-AL60_RS16400;Name=mptA;gbkey=Gene;gene=mptA;gene_biotype=protein_coding;locus_tag=AL60_RS16400;old_locus_tag=AL60_02202 NZ_KK316851.1 Protein Homology CDS 132249 133799 . + 0 ID=cds-WP_003899200.1;Parent=gene-AL60_RS16400;Dbxref=GenBank:WP_003899200.1;Name=WP_003899200.1;gbkey=CDS;gene=mptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216690.1;locus_tag=AL60_RS16400;product=alpha-(1->6)-mannopyranosyltransferase A;protein_id=WP_003899200.1;transl_table=11 NZ_KK316851.1 RefSeq gene 133786 134190 . - . ID=gene-AL60_RS16405;Name=AL60_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16405;old_locus_tag=AL60_02203 NZ_KK316851.1 Protein Homology CDS 133786 134190 . - 0 ID=cds-WP_003911781.1;Parent=gene-AL60_RS16405;Dbxref=GenBank:WP_003911781.1;Name=WP_003911781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020787128.1;locus_tag=AL60_RS16405;product=Rv2175c family DNA-binding protein;protein_id=WP_003911781.1;transl_table=11 NZ_KK316851.1 RefSeq gene 134281 135480 . + . ID=gene-AL60_RS16410;Name=pknL;gbkey=Gene;gene=pknL;gene_biotype=protein_coding;locus_tag=AL60_RS16410;old_locus_tag=AL60_02204 NZ_KK316851.1 Protein Homology CDS 134281 135480 . + 0 ID=cds-WP_012054312.1;Parent=gene-AL60_RS16410;Dbxref=GenBank:WP_012054312.1;Name=WP_012054312.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknL;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216692.1;locus_tag=AL60_RS16410;product=protein kinase domain-containing protein;protein_id=WP_012054312.1;transl_table=11 NZ_KK316851.1 RefSeq gene 135622 136221 . - . ID=gene-AL60_RS16415;Name=AL60_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16415;old_locus_tag=AL60_02205 NZ_KK316851.1 Protein Homology CDS 135622 136221 . - 0 ID=cds-WP_152313577.1;Parent=gene-AL60_RS16415;Dbxref=GenBank:WP_152313577.1;Name=WP_152313577.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF014430.6;locus_tag=AL60_RS16415;product=transposase;protein_id=WP_152313577.1;transl_table=11 NZ_KK316851.1 RefSeq gene 136221 136403 . - . ID=gene-AL60_RS26000;Name=AL60_RS26000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26000 NZ_KK316851.1 Protein Homology CDS 136221 136403 . - 0 ID=cds-WP_003905774.1;Parent=gene-AL60_RS26000;Dbxref=GenBank:WP_003905774.1;Name=WP_003905774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003905774.1;locus_tag=AL60_RS26000;product=hypothetical protein;protein_id=WP_003905774.1;transl_table=11 NZ_KK316851.1 RefSeq gene 136672 138060 . - . ID=gene-AL60_RS16420;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=AL60_RS16420;old_locus_tag=AL60_02206 NZ_KK316851.1 Protein Homology CDS 136672 138060 . - 0 ID=cds-WP_003411323.1;Parent=gene-AL60_RS16420;Dbxref=GenBank:WP_003411323.1;Name=WP_003411323.1;Ontology_term=GO:0009073,GO:0009423,GO:0003849;gbkey=CDS;gene=aroG;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216694.1;locus_tag=AL60_RS16420;product=class II 3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_003411323.1;transl_table=11 NZ_KK316851.1 RefSeq gene 138151 138657 . - . ID=gene-AL60_RS16425;Name=AL60_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16425;old_locus_tag=AL60_02207 NZ_KK316851.1 Protein Homology CDS 138151 138657 . - 0 ID=cds-WP_003411331.1;Parent=gene-AL60_RS16425;Dbxref=GenBank:WP_003411331.1;Name=WP_003411331.1;Ontology_term=GO:0000287,GO:0008408;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216695.1;locus_tag=AL60_RS16425;product=polyadenylate-specific 3'-exoribonuclease AS;protein_id=WP_003411331.1;transl_table=11 NZ_KK316851.1 RefSeq gene 138667 139554 . - . ID=gene-AL60_RS16430;Name=AL60_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16430;old_locus_tag=AL60_02208 NZ_KK316851.1 Protein Homology CDS 138667 139554 . - 0 ID=cds-WP_003411335.1;Parent=gene-AL60_RS16430;Dbxref=GenBank:WP_003411335.1;Name=WP_003411335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216696.1;locus_tag=AL60_RS16430;product=integral membrane protein;protein_id=WP_003411335.1;transl_table=11 NZ_KK316851.1 RefSeq gene 139642 140925 . + . ID=gene-AL60_RS16435;Name=AL60_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16435;old_locus_tag=AL60_02209 NZ_KK316851.1 Protein Homology CDS 139642 140925 . + 0 ID=cds-WP_003411339.1;Parent=gene-AL60_RS16435;Dbxref=GenBank:WP_003411339.1;Name=WP_003411339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216697.1;locus_tag=AL60_RS16435;product=alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase;protein_id=WP_003411339.1;transl_table=11 NZ_KK316851.1 RefSeq gene 140926 141669 . - . ID=gene-AL60_RS16440;Name=AL60_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16440;old_locus_tag=AL60_02210 NZ_KK316851.1 Protein Homology CDS 140926 141669 . - 0 ID=cds-WP_003411341.1;Parent=gene-AL60_RS16440;Dbxref=GenBank:WP_003411341.1;Name=WP_003411341.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216698.1;locus_tag=AL60_RS16440;product=lysophospholipid acyltransferase family protein;protein_id=WP_003411341.1;transl_table=11 NZ_KK316851.1 RefSeq gene 141755 142150 . - . ID=gene-AL60_RS16445;Name=AL60_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16445;old_locus_tag=AL60_02211 NZ_KK316851.1 Protein Homology CDS 141755 142150 . - 0 ID=cds-WP_003411344.1;Parent=gene-AL60_RS16445;Dbxref=GenBank:WP_003411344.1;Name=WP_003411344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216699.1;locus_tag=AL60_RS16445;product=DEAD/DEAH box helicase family protein;protein_id=WP_003411344.1;transl_table=11 NZ_KK316851.1 RefSeq gene 142147 143409 . - . ID=gene-AL60_RS16450;Name=AL60_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16450;old_locus_tag=AL60_02212 NZ_KK316851.1 Protein Homology CDS 142147 143409 . - 0 ID=cds-WP_003914048.1;Parent=gene-AL60_RS16450;Dbxref=GenBank:WP_003914048.1;Name=WP_003914048.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914048.1;locus_tag=AL60_RS16450;product=ArsA family ATPase;protein_id=WP_003914048.1;transl_table=11 NZ_KK316851.1 RefSeq gene 143406 143840 . - . ID=gene-AL60_RS16455;Name=AL60_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16455;old_locus_tag=AL60_02213 NZ_KK316851.1 Protein Homology CDS 143406 143840 . - 0 ID=cds-WP_003411354.1;Parent=gene-AL60_RS16455;Dbxref=GenBank:WP_003411354.1;Name=WP_003411354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216701.1;locus_tag=AL60_RS16455;product=SRPBCC family protein;protein_id=WP_003411354.1;transl_table=11 NZ_KK316851.1 RefSeq gene 143945 144334 . - . ID=gene-AL60_RS16460;Name=AL60_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16460;old_locus_tag=AL60_02214 NZ_KK316851.1 Protein Homology CDS 143945 144334 . - 0 ID=cds-WP_003411357.1;Parent=gene-AL60_RS16460;Dbxref=GenBank:WP_003411357.1;Name=WP_003411357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216702.1;locus_tag=AL60_RS16460;product=hypothetical protein;protein_id=WP_003411357.1;transl_table=11 NZ_KK316851.1 RefSeq gene 144500 146302 . + . ID=gene-AL60_RS16465;Name=AL60_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16465;old_locus_tag=AL60_02215 NZ_KK316851.1 Protein Homology CDS 144500 146302 . + 0 ID=cds-WP_003906768.1;Parent=gene-AL60_RS16465;Dbxref=GenBank:WP_003906768.1;Name=WP_003906768.1;Ontology_term=GO:0005524,GO:0015645;gbkey=CDS;go_function=ATP binding|0005524||IEA,fatty acid ligase activity|0015645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216703.1;locus_tag=AL60_RS16465;product=AMP-dependent synthetase/ligase;protein_id=WP_003906768.1;transl_table=11 NZ_KK316851.1 RefSeq gene 146333 147490 . - . ID=gene-AL60_RS16470;Name=pimB;gbkey=Gene;gene=pimB;gene_biotype=protein_coding;locus_tag=AL60_RS16470;old_locus_tag=AL60_02216 NZ_KK316851.1 Protein Homology CDS 146333 147490 . - 0 ID=cds-WP_003411369.1;Parent=gene-AL60_RS16470;Dbxref=GenBank:WP_003411369.1;Name=WP_003411369.1;gbkey=CDS;gene=pimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216704.2;locus_tag=AL60_RS16470;product=GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase;protein_id=WP_003411369.1;transl_table=11 NZ_KK316851.1 RefSeq gene 147587 148360 . - . ID=gene-AL60_RS16475;Name=AL60_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16475;old_locus_tag=AL60_02217 NZ_KK316851.1 Protein Homology CDS 147587 148360 . - 0 ID=cds-WP_003411371.1;Parent=gene-AL60_RS16475;Dbxref=GenBank:WP_003411371.1;Name=WP_003411371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216705.1;locus_tag=AL60_RS16475;product=hypothetical protein;protein_id=WP_003411371.1;transl_table=11 NZ_KK316851.1 RefSeq gene 148455 149612 . - . ID=gene-AL60_RS16480;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=AL60_RS16480;old_locus_tag=AL60_02218 NZ_KK316851.1 Protein Homology CDS 148455 149612 . - 0 ID=cds-WP_003411373.1;Parent=gene-AL60_RS16480;Dbxref=GenBank:WP_003411373.1;Name=WP_003411373.1;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216706.1;locus_tag=AL60_RS16480;product=peptidoglycan hydrolase RipC;protein_id=WP_003411373.1;transl_table=11 NZ_KK316851.1 RefSeq gene 149798 150076 . - . ID=gene-AL60_RS0104855;Name=AL60_RS0104855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104855;old_locus_tag=AL60_02219 NZ_KK316851.1 Protein Homology CDS 149798 150076 . - 0 ID=cds-WP_003908818.1;Parent=gene-AL60_RS0104855;Dbxref=GenBank:WP_003908818.1;Name=WP_003908818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908818.1;locus_tag=AL60_RS0104855;product=hypothetical protein;protein_id=WP_003908818.1;transl_table=11 NZ_KK316851.1 RefSeq pseudogene 150183 152033 . + . ID=gene-AL60_RS16485;Name=AL60_RS16485;end_range=152033,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS16485;old_locus_tag=AL60_02220;partial=true;pseudo=true NZ_KK316851.1 Protein Homology CDS 150183 152033 . + 0 ID=cds-AL60_RS16485;Parent=gene-AL60_RS16485;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=152033,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF005903.0;locus_tag=AL60_RS16485;partial=true;product=DEDD exonuclease domain-containing protein;pseudo=true;transl_table=11 NZ_KK316851.1 RefSeq gene 151971 153083 . - . ID=gene-AL60_RS26005;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=AL60_RS26005;old_locus_tag=AL60_02221 NZ_KK316851.1 Protein Homology CDS 151971 153083 . - 0 ID=cds-WP_003411387.1;Parent=gene-AL60_RS26005;Dbxref=GenBank:WP_003411387.1;Name=WP_003411387.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216708.1;locus_tag=AL60_RS26005;product=anthranilate phosphoribosyltransferase;protein_id=WP_003411387.1;transl_table=11 NZ_KK316851.1 RefSeq gene 153241 153852 . + . ID=gene-AL60_RS16490;Name=ctaE;gbkey=Gene;gene=ctaE;gene_biotype=protein_coding;locus_tag=AL60_RS16490;old_locus_tag=AL60_02222 NZ_KK316851.1 Protein Homology CDS 153241 153852 . + 0 ID=cds-WP_003411389.1;Parent=gene-AL60_RS16490;Dbxref=GenBank:WP_003411389.1;Name=WP_003411389.1;gbkey=CDS;gene=ctaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216709.1;locus_tag=AL60_RS16490;product=aa3-type cytochrome oxidase subunit III;protein_id=WP_003411389.1;transl_table=11 NZ_KK316851.1 RefSeq gene 153893 154735 . + . ID=gene-AL60_RS16495;Name=qcrC;gbkey=Gene;gene=qcrC;gene_biotype=protein_coding;locus_tag=AL60_RS16495;old_locus_tag=AL60_02223 NZ_KK316851.1 Protein Homology CDS 153893 154735 . + 0 ID=cds-WP_003411392.1;Parent=gene-AL60_RS16495;Dbxref=GenBank:WP_003411392.1;Name=WP_003411392.1;gbkey=CDS;gene=qcrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216710.1;locus_tag=AL60_RS16495;product=cytochrome bc1 complex diheme cytochrome c subunit;protein_id=WP_003411392.1;transl_table=11 NZ_KK316851.1 RefSeq pseudogene 154738 154809 . + . ID=gene-AL60_RS27930;Name=AL60_RS27930;end_range=154809,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27930;partial=true;pseudo=true;start_range=.,154738 NZ_KK316851.1 Protein Homology CDS 154738 154809 . + 0 ID=cds-AL60_RS27930;Parent=gene-AL60_RS27930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=154809,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217793.1;locus_tag=AL60_RS27930;partial=true;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;pseudo=true;start_range=.,154738;transl_table=11 NZ_KK316851.1 RefSeq gene 154810 156021 . + . ID=gene-AL60_RS16500;Name=qcrA;gbkey=Gene;gene=qcrA;gene_biotype=protein_coding;locus_tag=AL60_RS16500;old_locus_tag=AL60_02224 NZ_KK316851.1 Protein Homology CDS 154810 156021 . + 0 ID=cds-WP_003911816.1;Parent=gene-AL60_RS16500;Dbxref=GenBank:WP_003911816.1;Name=WP_003911816.1;gbkey=CDS;gene=qcrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911816.1;locus_tag=AL60_RS16500;product=cytochrome bc1 complex Rieske iron-sulfur subunit;protein_id=WP_003911816.1;transl_table=11 NZ_KK316851.1 RefSeq gene 156018 157667 . + . ID=gene-AL60_RS16505;Name=qcrB;gbkey=Gene;gene=qcrB;gene_biotype=protein_coding;locus_tag=AL60_RS16505;old_locus_tag=AL60_02225 NZ_KK316851.1 Protein Homology CDS 156018 157667 . + 0 ID=cds-WP_003899212.1;Parent=gene-AL60_RS16505;Dbxref=GenBank:WP_003899212.1;Name=WP_003899212.1;gbkey=CDS;gene=qcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216712.1;locus_tag=AL60_RS16505;product=cytochrome bc1 complex cytochrome b subunit;protein_id=WP_003899212.1;transl_table=11 NZ_KK316851.1 RefSeq gene 157844 158488 . - . ID=gene-AL60_RS16510;Name=AL60_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16510;old_locus_tag=AL60_02226 NZ_KK316851.1 Protein Homology CDS 157844 158488 . - 0 ID=cds-WP_012054314.1;Parent=gene-AL60_RS16510;Dbxref=GenBank:WP_012054314.1;Name=WP_012054314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216713.1;locus_tag=AL60_RS16510;product=DUF2561 family protein;protein_id=WP_012054314.1;transl_table=11 NZ_KK316851.1 RefSeq gene 158488 159387 . - . ID=gene-AL60_RS16515;Name=AL60_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16515;old_locus_tag=AL60_02227 NZ_KK316851.1 Protein Homology CDS 158488 159387 . - 0 ID=cds-WP_003411405.1;Parent=gene-AL60_RS16515;Dbxref=GenBank:WP_003411405.1;Name=WP_003411405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216714.1;locus_tag=AL60_RS16515;product=MmpS family transport accessory protein;protein_id=WP_003411405.1;transl_table=11 NZ_KK316851.1 RefSeq gene 159573 159992 . - . ID=gene-AL60_RS16520;Name=AL60_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16520;old_locus_tag=AL60_02228 NZ_KK316851.1 Protein Homology CDS 159573 159992 . - 0 ID=cds-WP_003411408.1;Parent=gene-AL60_RS16520;Dbxref=GenBank:WP_003411408.1;Name=WP_003411408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216715.1;locus_tag=AL60_RS16520;product=cytochrome c oxidase subunit 4;protein_id=WP_003411408.1;transl_table=11 NZ_KK316851.1 RefSeq gene 160000 161091 . - . ID=gene-AL60_RS16525;Name=ctaC;gbkey=Gene;gene=ctaC;gene_biotype=protein_coding;locus_tag=AL60_RS16525;old_locus_tag=AL60_02229 NZ_KK316851.1 Protein Homology CDS 160000 161091 . - 0 ID=cds-WP_003899214.1;Parent=gene-AL60_RS16525;Dbxref=GenBank:WP_003899214.1;Name=WP_003899214.1;gbkey=CDS;gene=ctaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216716.1;locus_tag=AL60_RS16525;product=aa3-type cytochrome oxidase subunit II;protein_id=WP_003899214.1;transl_table=11 NZ_KK316851.1 RefSeq gene 161337 163295 . + . ID=gene-AL60_RS16530;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AL60_RS16530;old_locus_tag=AL60_02230 NZ_KK316851.1 Protein Homology CDS 161337 163295 . + 0 ID=cds-WP_003411413.1;Parent=gene-AL60_RS16530;Dbxref=GenBank:WP_003411413.1;Name=WP_003411413.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216717.1;locus_tag=AL60_RS16530;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_003411413.1;transl_table=11 NZ_KK316851.1 RefSeq gene 163393 164367 . - . ID=gene-AL60_RS16535;Name=adoK;gbkey=Gene;gene=adoK;gene_biotype=protein_coding;locus_tag=AL60_RS16535;old_locus_tag=AL60_02231 NZ_KK316851.1 Protein Homology CDS 163393 164367 . - 0 ID=cds-WP_003411414.1;Parent=gene-AL60_RS16535;Dbxref=GenBank:WP_003411414.1;Name=WP_003411414.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;gene=adoK;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216718.1;locus_tag=AL60_RS16535;product=carbohydrate kinase family protein;protein_id=WP_003411414.1;transl_table=11 NZ_KK316851.1 RefSeq gene 164571 165263 . + . ID=gene-AL60_RS16540;Name=AL60_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16540;old_locus_tag=AL60_02232 NZ_KK316851.1 Protein Homology CDS 164571 165263 . + 0 ID=cds-WP_003411415.1;Parent=gene-AL60_RS16540;Dbxref=GenBank:WP_003411415.1;Name=WP_003411415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216719.1;locus_tag=AL60_RS16540;product=Rv0361 family membrane protein;protein_id=WP_003411415.1;transl_table=11 NZ_KK316851.1 RefSeq gene 165271 165627 . - . ID=gene-AL60_RS16545;Name=AL60_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16545;old_locus_tag=AL60_02233 NZ_KK316851.1 Protein Homology CDS 165271 165627 . - 0 ID=cds-WP_003411418.1;Parent=gene-AL60_RS16545;Dbxref=GenBank:WP_003411418.1;Name=WP_003411418.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216720.1;locus_tag=AL60_RS16545;product=HesB/IscA family protein;protein_id=WP_003411418.1;transl_table=11 NZ_KK316851.1 RefSeq gene 165727 166803 . - . ID=gene-AL60_RS16550;Name=AL60_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16550;old_locus_tag=AL60_02234 NZ_KK316851.1 Protein Homology CDS 165727 166803 . - 0 ID=cds-WP_003411420.1;Parent=gene-AL60_RS16550;Dbxref=GenBank:WP_003411420.1;Name=WP_003411420.1;Ontology_term=GO:0016310,GO:0031388,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=phosphorylation|0016310||IEA,organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216721.2;locus_tag=AL60_RS16550;product=glycerate kinase family protein;protein_id=WP_003411420.1;transl_table=11 NZ_KK316851.1 RefSeq gene 166962 167672 . + . ID=gene-AL60_RS16555;Name=AL60_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16555;old_locus_tag=AL60_02235 NZ_KK316851.1 Protein Homology CDS 166962 167672 . + 0 ID=cds-WP_003411425.1;Parent=gene-AL60_RS16555;Dbxref=GenBank:WP_003411425.1;Name=WP_003411425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216722.2;locus_tag=AL60_RS16555;product=DUF3043 domain-containing protein;protein_id=WP_003411425.1;transl_table=11 NZ_KK316851.1 RefSeq gene 167751 168836 . + . ID=gene-AL60_RS16560;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=AL60_RS16560;old_locus_tag=AL60_02236 NZ_KK316851.1 Protein Homology CDS 167751 168836 . + 0 ID=cds-WP_003411429.1;Parent=gene-AL60_RS16560;Dbxref=GenBank:WP_003411429.1;Name=WP_003411429.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216723.1;locus_tag=AL60_RS16560;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_003411429.1;transl_table=11 NZ_KK316851.1 RefSeq gene 168833 169582 . + . ID=gene-AL60_RS16565;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=AL60_RS16565;old_locus_tag=AL60_02237 NZ_KK316851.1 Protein Homology CDS 168833 169582 . + 0 ID=cds-WP_003899217.1;Parent=gene-AL60_RS16565;Dbxref=GenBank:WP_003899217.1;Name=WP_003899217.1;gbkey=CDS;gene=cobS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216724.1;locus_tag=AL60_RS16565;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_003899217.1;transl_table=11 NZ_KK316851.1 RefSeq gene 169740 171278 . + . ID=gene-AL60_RS16570;Name=AL60_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16570;old_locus_tag=AL60_02238 NZ_KK316851.1 Protein Homology CDS 169740 171278 . + 0 ID=cds-WP_003899218.1;Parent=gene-AL60_RS16570;Dbxref=GenBank:WP_003899218.1;Name=WP_003899218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216725.1;locus_tag=AL60_RS16570;product=hypothetical protein;protein_id=WP_003899218.1;transl_table=11 NZ_KK316851.1 RefSeq gene 171204 172310 . - . ID=gene-AL60_RS16575;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=AL60_RS16575;old_locus_tag=AL60_02239 NZ_KK316851.1 Protein Homology CDS 171204 172310 . - 0 ID=cds-WP_003411438.1;Parent=gene-AL60_RS16575;Dbxref=GenBank:WP_003411438.1;Name=WP_003411438.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216726.1;locus_tag=AL60_RS16575;product=branched-chain amino acid aminotransferase;protein_id=WP_003411438.1;transl_table=11 NZ_KK316851.1 RefSeq gene 172382 173485 . - . ID=gene-AL60_RS16580;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AL60_RS16580;old_locus_tag=AL60_02240 NZ_KK316851.1 Protein Homology CDS 172382 173485 . - 0 ID=cds-WP_003899219.1;Parent=gene-AL60_RS16580;Dbxref=GenBank:WP_003899219.1;Name=WP_003899219.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010907977.1;locus_tag=AL60_RS16580;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_003899219.1;transl_table=11 NZ_KK316851.1 RefSeq gene 173530 174666 . + . ID=gene-AL60_RS16585;Name=AL60_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16585;old_locus_tag=AL60_02241 NZ_KK316851.1 Protein Homology CDS 173530 174666 . + 0 ID=cds-WP_003411442.1;Parent=gene-AL60_RS16585;Dbxref=GenBank:WP_003411442.1;Name=WP_003411442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216728.1;locus_tag=AL60_RS16585;product=adenylyl cyclase;protein_id=WP_003411442.1;transl_table=11 NZ_KK316851.1 RefSeq gene 174678 176225 . + . ID=gene-AL60_RS16590;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=AL60_RS16590;old_locus_tag=AL60_02242 NZ_KK316851.1 Protein Homology CDS 174678 176225 . + 0 ID=cds-WP_003899220.1;Parent=gene-AL60_RS16590;Dbxref=GenBank:WP_003899220.1;Name=WP_003899220.1;Ontology_term=GO:0006508,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216729.1;locus_tag=AL60_RS16590;product=leucyl aminopeptidase;protein_id=WP_003899220.1;transl_table=11 NZ_KK316851.1 RefSeq gene 176263 178041 . - . ID=gene-AL60_RS16595;Name=ephD;gbkey=Gene;gene=ephD;gene_biotype=protein_coding;locus_tag=AL60_RS16595;old_locus_tag=AL60_02243 NZ_KK316851.1 Protein Homology CDS 176263 178041 . - 0 ID=cds-WP_003411445.1;Parent=gene-AL60_RS16595;Dbxref=GenBank:WP_003411445.1;Name=WP_003411445.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ephD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216730.1;locus_tag=AL60_RS16595;product=SDR family oxidoreductase;protein_id=WP_003411445.1;transl_table=11 NZ_KK316851.1 RefSeq gene 178305 179966 . + . ID=gene-AL60_RS16600;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=AL60_RS16600;old_locus_tag=AL60_02244 NZ_KK316851.1 Protein Homology CDS 178305 179966 . + 0 ID=cds-WP_003411450.1;Parent=gene-AL60_RS16600;Dbxref=GenBank:WP_003411450.1;Name=WP_003411450.1;Ontology_term=GO:0016746;gbkey=CDS;gene=sucB;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216731.1;locus_tag=AL60_RS16600;product=2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase;protein_id=WP_003411450.1;transl_table=11 NZ_KK316851.1 RefSeq gene 179966 180871 . + . ID=gene-AL60_RS16605;Name=AL60_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16605;old_locus_tag=AL60_02245 NZ_KK316851.1 Protein Homology CDS 179966 180871 . + 0 ID=cds-WP_003411454.1;Parent=gene-AL60_RS16605;Dbxref=GenBank:WP_003411454.1;Name=WP_003411454.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216732.1;locus_tag=AL60_RS16605;product=TIGR01777 family oxidoreductase;protein_id=WP_003411454.1;transl_table=11 NZ_KK316851.1 RefSeq gene 180924 181616 . + . ID=gene-AL60_RS16610;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AL60_RS16610;old_locus_tag=AL60_02246 NZ_KK316851.1 Protein Homology CDS 180924 181616 . + 0 ID=cds-WP_003411458.1;Parent=gene-AL60_RS16610;Dbxref=GenBank:WP_003411458.1;Name=WP_003411458.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216733.1;locus_tag=AL60_RS16610;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_003411458.1;transl_table=11 NZ_KK316851.1 RefSeq gene 181613 182548 . + . ID=gene-AL60_RS16615;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AL60_RS16615;old_locus_tag=AL60_02247 NZ_KK316851.1 Protein Homology CDS 181613 182548 . + 0 ID=cds-WP_003411460.1;Parent=gene-AL60_RS16615;Dbxref=GenBank:WP_003411460.1;Name=WP_003411460.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216734.1;locus_tag=AL60_RS16615;product=lipoyl synthase;protein_id=WP_003411460.1;transl_table=11 NZ_KK316851.1 RefSeq gene 182575 183327 . + . ID=gene-AL60_RS16620;Name=AL60_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16620;old_locus_tag=AL60_02248 NZ_KK316851.1 Protein Homology CDS 182575 183327 . + 0 ID=cds-WP_003411463.1;Parent=gene-AL60_RS16620;Dbxref=GenBank:WP_003411463.1;Name=WP_003411463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216735.1;locus_tag=AL60_RS16620;product=DUF4191 domain-containing protein;protein_id=WP_003411463.1;transl_table=11 NZ_KK316851.1 RefSeq gene 183334 183756 . - . ID=gene-AL60_RS16625;Name=AL60_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16625;old_locus_tag=AL60_02249 NZ_KK316851.1 Protein Homology CDS 183334 183756 . - 0 ID=cds-WP_003411466.1;Parent=gene-AL60_RS16625;Dbxref=GenBank:WP_003411466.1;Name=WP_003411466.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177661.1;locus_tag=AL60_RS16625;product=RDD family protein;protein_id=WP_003411466.1;transl_table=11 NZ_KK316851.1 RefSeq gene 183955 185391 . + . ID=gene-AL60_RS16630;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AL60_RS16630;old_locus_tag=AL60_02250 NZ_KK316851.1 Protein Homology CDS 183955 185391 . + 0 ID=cds-WP_003411475.1;Parent=gene-AL60_RS16630;Dbxref=GenBank:WP_003411475.1;Name=WP_003411475.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216736.1;locus_tag=AL60_RS16630;product=type I glutamate--ammonia ligase;protein_id=WP_003411475.1;transl_table=11 NZ_KK316851.1 RefSeq gene 185709 188693 . - . ID=gene-AL60_RS16635;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=AL60_RS16635;old_locus_tag=AL60_02251 NZ_KK316851.1 Protein Homology CDS 185709 188693 . - 0 ID=cds-WP_003411478.1;Parent=gene-AL60_RS16635;Dbxref=GenBank:WP_003411478.1;Name=WP_003411478.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216737.1;locus_tag=AL60_RS16635;product=bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase;protein_id=WP_003411478.1;transl_table=11 NZ_KK316851.1 RefSeq gene 188742 190082 . - . ID=gene-AL60_RS16640;Name=AL60_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16640;old_locus_tag=AL60_02252 NZ_KK316851.1 Protein Homology CDS 188742 190082 . - 0 ID=cds-WP_003411482.1;Parent=gene-AL60_RS16640;Dbxref=GenBank:WP_003411482.1;Name=WP_003411482.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216738.1;locus_tag=AL60_RS16640;product=glutamine synthetase family protein;protein_id=WP_003411482.1;transl_table=11 NZ_KK316851.1 RefSeq gene 190177 191739 . - . ID=gene-AL60_RS16645;Name=caeB;gbkey=Gene;gene=caeB;gene_biotype=protein_coding;locus_tag=AL60_RS16645;old_locus_tag=AL60_02253 NZ_KK316851.1 Protein Homology CDS 190177 191739 . - 0 ID=cds-WP_003411484.1;Parent=gene-AL60_RS16645;Dbxref=GenBank:WP_003411484.1;Name=WP_003411484.1;gbkey=CDS;gene=caeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216739.1;locus_tag=AL60_RS16645;product=carboxylesterase CaeB;protein_id=WP_003411484.1;transl_table=11 NZ_KK316851.1 RefSeq gene 191801 193363 . - . ID=gene-AL60_RS16650;Name=caeA;gbkey=Gene;gene=caeA;gene_biotype=protein_coding;locus_tag=AL60_RS16650;old_locus_tag=AL60_02254 NZ_KK316851.1 Protein Homology CDS 191801 193363 . - 0 ID=cds-WP_003411486.1;Parent=gene-AL60_RS16650;Dbxref=GenBank:WP_003411486.1;Name=WP_003411486.1;gbkey=CDS;gene=caeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216740.1;locus_tag=AL60_RS16650;product=carboxylesterase CaeA;protein_id=WP_003411486.1;transl_table=11 NZ_KK316851.1 RefSeq gene 193565 193786 . - . ID=gene-AL60_RS0104870;Name=AL60_RS0104870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104870 NZ_KK316851.1 Protein Homology CDS 193565 193786 . - 0 ID=cds-WP_012054189.1;Parent=gene-AL60_RS0104870;Dbxref=GenBank:WP_012054189.1;Name=WP_012054189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030036.1;locus_tag=AL60_RS0104870;product=hypothetical protein;protein_id=WP_012054189.1;transl_table=11 NZ_KK316851.1 RefSeq gene 194082 194927 . + . ID=gene-AL60_RS16655;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AL60_RS16655;old_locus_tag=AL60_02255 NZ_KK316851.1 Protein Homology CDS 194082 194927 . + 0 ID=cds-WP_003411489.1;Parent=gene-AL60_RS16655;Dbxref=GenBank:WP_003411489.1;Name=WP_003411489.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216741.1;locus_tag=AL60_RS16655;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_003411489.1;transl_table=11 NZ_KK316851.1 RefSeq gene 195172 196713 . + . ID=gene-AL60_RS16660;Name=AL60_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16660;old_locus_tag=AL60_02256 NZ_KK316851.1 Protein Homology CDS 195172 196713 . + 0 ID=cds-WP_003899224.1;Parent=gene-AL60_RS16660;Dbxref=GenBank:WP_003899224.1;Name=WP_003899224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216742.1;locus_tag=AL60_RS16660;product=CYTH and CHAD domain-containing protein;protein_id=WP_003899224.1;transl_table=11 NZ_KK316851.1 RefSeq gene 196726 197154 . - . ID=gene-AL60_RS17315;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AL60_RS17315 NZ_KK316851.1 cmsearch RNase_P_RNA 196726 197154 . - . ID=rna-AL60_RS17315;Parent=gene-AL60_RS17315;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL60_RS17315;product=RNase P RNA component class A NZ_KK316851.1 cmsearch exon 196726 197154 . - . ID=exon-AL60_RS17315-1;Parent=rna-AL60_RS17315;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL60_RS17315;product=RNase P RNA component class A NZ_KK316851.1 RefSeq pseudogene 197263 197972 . + . ID=gene-AL60_RS16665;Name=AL60_RS16665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS16665;old_locus_tag=AL60_02257;pseudo=true NZ_KK316851.1 Protein Homology CDS 197263 197972 . + 0 ID=cds-AL60_RS16665;Parent=gene-AL60_RS16665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007170864.1;locus_tag=AL60_RS16665;product=2OG-Fe(II) oxygenase;pseudo=true;transl_table=11 NZ_KK316851.1 RefSeq gene 197984 199078 . - . ID=gene-AL60_RS16670;Name=AL60_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16670;old_locus_tag=AL60_02258 NZ_KK316851.1 Protein Homology CDS 197984 199078 . - 0 ID=cds-WP_003899226.1;Parent=gene-AL60_RS16670;Dbxref=GenBank:WP_003899226.1;Name=WP_003899226.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872350.1;locus_tag=AL60_RS16670;product=bifunctional RNase H/acid phosphatase;protein_id=WP_003899226.1;transl_table=11 NZ_KK316851.1 RefSeq gene 199075 199812 . - . ID=gene-AL60_RS16675;Name=AL60_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16675;old_locus_tag=AL60_02259 NZ_KK316851.1 Protein Homology CDS 199075 199812 . - 0 ID=cds-WP_003411501.1;Parent=gene-AL60_RS16675;Dbxref=GenBank:WP_003411501.1;Name=WP_003411501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216745.1;locus_tag=AL60_RS16675;product=zinc ribbon domain-containing protein;protein_id=WP_003411501.1;transl_table=11 NZ_KK316851.1 RefSeq gene 199809 200948 . - . ID=gene-AL60_RS16680;Name=AL60_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16680;old_locus_tag=AL60_02260 NZ_KK316851.1 Protein Homology CDS 199809 200948 . - 0 ID=cds-WP_003411502.1;Parent=gene-AL60_RS16680;Dbxref=GenBank:WP_003411502.1;Name=WP_003411502.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216746.1;locus_tag=AL60_RS16680;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_003411502.1;transl_table=11 NZ_KK316851.1 RefSeq gene 200945 202030 . - . ID=gene-AL60_RS16685;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=AL60_RS16685;old_locus_tag=AL60_02261 NZ_KK316851.1 Protein Homology CDS 200945 202030 . - 0 ID=cds-WP_079092157.1;Parent=gene-AL60_RS16685;Dbxref=GenBank:WP_079092157.1;Name=WP_079092157.1;Ontology_term=GO:0009236,GO:0030170;gbkey=CDS;gene=cobC;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: protein motif:HMM:NF005915.0;locus_tag=AL60_RS16685;product=Rv2231c family histidinol phosphate aminotransferase CobC;protein_id=WP_079092157.1;transl_table=11 NZ_KK316851.1 RefSeq gene 202076 202501 . - . ID=gene-AL60_RS16690;Name=AL60_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16690;old_locus_tag=AL60_02262 NZ_KK316851.1 Protein Homology CDS 202076 202501 . - 0 ID=cds-WP_010886140.1;Parent=gene-AL60_RS16690;Dbxref=GenBank:WP_010886140.1;Name=WP_010886140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410917.1;locus_tag=AL60_RS16690;product=PIN domain-containing protein;protein_id=WP_010886140.1;transl_table=11 NZ_KK316851.1 RefSeq gene 202547 202723 . - . ID=gene-AL60_RS27160;Name=AL60_RS27160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27160;old_locus_tag=AL60_02263 NZ_KK316851.1 Protein Homology CDS 202547 202723 . - 0 ID=cds-WP_003903810.1;Parent=gene-AL60_RS27160;Dbxref=GenBank:WP_003903810.1;Name=WP_003903810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410918.1;locus_tag=AL60_RS27160;product=antitoxin VapB16;protein_id=WP_003903810.1;transl_table=11 NZ_KK316851.1 RefSeq gene 202768 203493 . + . ID=gene-AL60_RS0104875;Name=ptkA;gbkey=Gene;gene=ptkA;gene_biotype=protein_coding;locus_tag=AL60_RS0104875;old_locus_tag=AL60_02264 NZ_KK316851.1 Protein Homology CDS 202768 203493 . + 0 ID=cds-WP_015288273.1;Parent=gene-AL60_RS0104875;Dbxref=GenBank:WP_015288273.1;Name=WP_015288273.1;gbkey=CDS;gene=ptkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015290517.1;locus_tag=AL60_RS0104875;product=Rv2232 family HAD-type protein-tyrosine kinase;protein_id=WP_015288273.1;transl_table=11 NZ_KK316851.1 RefSeq gene 203486 203977 . + . ID=gene-AL60_RS16700;Name=ptpA;gbkey=Gene;gene=ptpA;gene_biotype=protein_coding;locus_tag=AL60_RS16700;old_locus_tag=AL60_02265 NZ_KK316851.1 Protein Homology CDS 203486 203977 . + 0 ID=cds-WP_003411510.1;Parent=gene-AL60_RS16700;Dbxref=GenBank:WP_003411510.1;Name=WP_003411510.1;gbkey=CDS;gene=ptpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216750.1;locus_tag=AL60_RS16700;product=protein-tyrosine-phosphatase;protein_id=WP_003411510.1;transl_table=11 NZ_KK316851.1 RefSeq gene 203977 204792 . + . ID=gene-AL60_RS16705;Name=AL60_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16705;old_locus_tag=AL60_02266 NZ_KK316851.1 Protein Homology CDS 203977 204792 . + 0 ID=cds-WP_003411514.1;Parent=gene-AL60_RS16705;Dbxref=GenBank:WP_003411514.1;Name=WP_003411514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216751.1;locus_tag=AL60_RS16705;product=SURF1 family cytochrome oxidase biogenesis protein;protein_id=WP_003411514.1;transl_table=11 NZ_KK316851.1 RefSeq gene 204774 205715 . - . ID=gene-AL60_RS16710;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=AL60_RS16710;old_locus_tag=AL60_02267 NZ_KK316851.1 Protein Homology CDS 204774 205715 . - 0 ID=cds-WP_003901355.1;Parent=gene-AL60_RS16710;Dbxref=GenBank:WP_003901355.1;Name=WP_003901355.1;Ontology_term=GO:0009236,GO:0048472;gbkey=CDS;gene=cobD;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216752.1;locus_tag=AL60_RS16710;product=cobalamin biosynthesis protein;protein_id=WP_003901355.1;transl_table=11 NZ_KK316851.1 RefSeq gene 205781 206596 . + . ID=gene-AL60_RS16715;Name=AL60_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16715;old_locus_tag=AL60_02268 NZ_KK316851.1 Protein Homology CDS 205781 206596 . + 0 ID=cds-WP_003411520.1;Parent=gene-AL60_RS16715;Dbxref=GenBank:WP_003411520.1;Name=WP_003411520.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411520.1;locus_tag=AL60_RS16715;product=oxygenase MpaB family protein;protein_id=WP_003411520.1;transl_table=11 NZ_KK316851.1 RefSeq gene 206691 206816 . - . ID=gene-AL60_RS27830;Name=AL60_RS27830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27830 NZ_KK316851.1 GeneMarkS-2+ CDS 206691 206816 . - 0 ID=cds-WP_009936466.1;Parent=gene-AL60_RS27830;Dbxref=GenBank:WP_009936466.1;Name=WP_009936466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS27830;product=hypothetical protein;protein_id=WP_009936466.1;transl_table=11 NZ_KK316851.1 RefSeq gene 206938 207009 . - . ID=gene-AL60_RS16725;Name=AL60_RS16725;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS16725;old_locus_tag=AL60_02270 NZ_KK316851.1 tRNAscan-SE tRNA 206938 207009 . - . ID=rna-AL60_RS16725;Parent=gene-AL60_RS16725;anticodon=(pos:complement(206975..206977));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS16725;product=tRNA-Val NZ_KK316851.1 tRNAscan-SE exon 206938 207009 . - . ID=exon-AL60_RS16725-1;Parent=rna-AL60_RS16725;anticodon=(pos:complement(206975..206977));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS16725;product=tRNA-Val NZ_KK316851.1 RefSeq gene 207055 207516 . - . ID=gene-AL60_RS16730;Name=ahpE;gbkey=Gene;gene=ahpE;gene_biotype=protein_coding;locus_tag=AL60_RS16730;old_locus_tag=AL60_02271 NZ_KK316851.1 Protein Homology CDS 207055 207516 . - 0 ID=cds-WP_003411527.1;Parent=gene-AL60_RS16730;Dbxref=GenBank:WP_003411527.1;Name=WP_003411527.1;gbkey=CDS;gene=ahpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216754.1;locus_tag=AL60_RS16730;product=peroxiredoxin AhpE;protein_id=WP_003411527.1;transl_table=11 NZ_KK316851.1 RefSeq gene 207516 207938 . - . ID=gene-AL60_RS16735;Name=AL60_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16735;old_locus_tag=AL60_02272 NZ_KK316851.1 Protein Homology CDS 207516 207938 . - 0 ID=cds-WP_003911787.1;Parent=gene-AL60_RS16735;Dbxref=GenBank:WP_003911787.1;Name=WP_003911787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911787.1;locus_tag=AL60_RS16735;product=DUF3052 domain-containing protein;protein_id=WP_003911787.1;transl_table=11 NZ_KK316851.1 RefSeq gene 208030 208620 . - . ID=gene-AL60_RS16740;Name=AL60_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16740;old_locus_tag=AL60_02273 NZ_KK316851.1 Protein Homology CDS 208030 208620 . - 0 ID=cds-WP_003911826.1;Parent=gene-AL60_RS16740;Dbxref=GenBank:WP_003911826.1;Name=WP_003911826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216756.2;locus_tag=AL60_RS16740;product=hypothetical protein;protein_id=WP_003911826.1;transl_table=11 NZ_KK316851.1 RefSeq gene 208792 211584 . + . ID=gene-AL60_RS16745;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AL60_RS16745;old_locus_tag=AL60_02274 NZ_KK316851.1 Protein Homology CDS 208792 211584 . + 0 ID=cds-WP_003911788.1;Parent=gene-AL60_RS16745;Dbxref=GenBank:WP_003911788.1;Name=WP_003911788.1;Ontology_term=GO:0006086,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911788.1;locus_tag=AL60_RS16745;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_003911788.1;transl_table=11 NZ_KK316851.1 RefSeq gene 211644 212888 . + . ID=gene-AL60_RS16750;Name=AL60_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16750;old_locus_tag=AL60_02275 NZ_KK316851.1 Protein Homology CDS 211644 212888 . + 0 ID=cds-WP_003411543.1;Parent=gene-AL60_RS16750;Dbxref=GenBank:WP_003411543.1;Name=WP_003411543.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216758.1;locus_tag=AL60_RS16750;product=PucR family transcriptional regulator;protein_id=WP_003411543.1;transl_table=11 NZ_KK316851.1 RefSeq gene 213127 214035 . + . ID=gene-AL60_RS16755;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AL60_RS16755;old_locus_tag=AL60_02276 NZ_KK316851.1 Protein Homology CDS 213127 214035 . + 0 ID=cds-WP_003411559.1;Parent=gene-AL60_RS16755;Dbxref=GenBank:WP_003411559.1;Name=WP_003411559.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216759.1;locus_tag=AL60_RS16755;product=malonyl CoA-acyl carrier protein transacylase;protein_id=WP_003411559.1;transl_table=11 NZ_KK316851.1 RefSeq gene 214111 214458 . + . ID=gene-AL60_RS16760;Name=acpM;gbkey=Gene;gene=acpM;gene_biotype=protein_coding;locus_tag=AL60_RS16760;old_locus_tag=AL60_02277 NZ_KK316851.1 Protein Homology CDS 214111 214458 . + 0 ID=cds-WP_003411565.1;Parent=gene-AL60_RS16760;Dbxref=GenBank:WP_003411565.1;Name=WP_003411565.1;Ontology_term=GO:0071768;gbkey=CDS;gene=acpM;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216760.1;locus_tag=AL60_RS16760;product=meromycolate extension acyl carrier protein AcpM;protein_id=WP_003411565.1;transl_table=11 NZ_KK316851.1 RefSeq gene 214455 215705 . + . ID=gene-AL60_RS16765;Name=kasA;gbkey=Gene;gene=kasA;gene_biotype=protein_coding;locus_tag=AL60_RS16765;old_locus_tag=AL60_02278 NZ_KK316851.1 Protein Homology CDS 214455 215705 . + 0 ID=cds-WP_003411571.1;Parent=gene-AL60_RS16765;Dbxref=GenBank:WP_003411571.1;Name=WP_003411571.1;gbkey=CDS;gene=kasA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216761.1;locus_tag=AL60_RS16765;product=3-oxoacyl-ACP synthase KasA;protein_id=WP_003411571.1;transl_table=11 NZ_KK316851.1 RefSeq gene 215799 217052 . + . ID=gene-AL60_RS16770;Name=kasB;gbkey=Gene;gene=kasB;gene_biotype=protein_coding;locus_tag=AL60_RS16770;old_locus_tag=AL60_02279 NZ_KK316851.1 Protein Homology CDS 215799 217052 . + 0 ID=cds-WP_003411576.1;Parent=gene-AL60_RS16770;Dbxref=GenBank:WP_003411576.1;Name=WP_003411576.1;gbkey=CDS;gene=kasB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411576.1;locus_tag=AL60_RS16770;product=3-oxoacyl-ACP synthase KasB;protein_id=WP_003411576.1;transl_table=11 NZ_KK316851.1 RefSeq gene 217083 218504 . + . ID=gene-AL60_RS16775;Name=AL60_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16775;old_locus_tag=AL60_02280 NZ_KK316851.1 Protein Homology CDS 217083 218504 . + 0 ID=cds-WP_003900487.1;Parent=gene-AL60_RS16775;Dbxref=GenBank:WP_003900487.1;Name=WP_003900487.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216763.1;locus_tag=AL60_RS16775;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003900487.1;transl_table=11 NZ_KK316851.1 RefSeq gene 218628 219515 . + . ID=gene-AL60_RS16780;Name=AL60_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16780;old_locus_tag=AL60_02281 NZ_KK316851.1 Protein Homology CDS 218628 219515 . + 0 ID=cds-WP_003900488.1;Parent=gene-AL60_RS16780;Dbxref=GenBank:WP_003900488.1;Name=WP_003900488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584819.1;locus_tag=AL60_RS16780;product=hypothetical protein;protein_id=WP_003900488.1;transl_table=11 NZ_KK316851.1 RefSeq gene 219584 221134 . - . ID=gene-AL60_RS16785;Name=AL60_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16785;old_locus_tag=AL60_02282 NZ_KK316851.1 Protein Homology CDS 219584 221134 . - 0 ID=cds-WP_003411591.1;Parent=gene-AL60_RS16785;Dbxref=GenBank:WP_003411591.1;Name=WP_003411591.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216765.1;locus_tag=AL60_RS16785;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_003411591.1;transl_table=11 NZ_KK316851.1 RefSeq gene 221128 221697 . - . ID=gene-AL60_RS16790;Name=AL60_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16790;old_locus_tag=AL60_02283 NZ_KK316851.1 Protein Homology CDS 221128 221697 . - 0 ID=cds-WP_003411595.1;Parent=gene-AL60_RS16790;Dbxref=GenBank:WP_003411595.1;Name=WP_003411595.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216766.2;locus_tag=AL60_RS16790;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003411595.1;transl_table=11 NZ_KK316851.1 RefSeq gene 221745 223334 . + . ID=gene-AL60_RS16795;Name=AL60_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16795;old_locus_tag=AL60_02284 NZ_KK316851.1 Protein Homology CDS 221745 223334 . + 0 ID=cds-WP_003411596.1;Parent=gene-AL60_RS16795;Dbxref=GenBank:WP_003411596.1;Name=WP_003411596.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015575176.1;locus_tag=AL60_RS16795;product=FAD-binding oxidoreductase;protein_id=WP_003411596.1;transl_table=11 NZ_KK316851.1 RefSeq gene 223331 224260 . + . ID=gene-AL60_RS16800;Name=AL60_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16800;old_locus_tag=AL60_02285 NZ_KK316851.1 Protein Homology CDS 223331 224260 . + 0 ID=cds-WP_003411603.1;Parent=gene-AL60_RS16800;Dbxref=GenBank:WP_003411603.1;Name=WP_003411603.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216768.1;locus_tag=AL60_RS16800;product=diacylglycerol kinase;protein_id=WP_003411603.1;transl_table=11 NZ_KK316851.1 RefSeq gene 224326 224829 . + . ID=gene-AL60_RS16805;Name=AL60_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16805;old_locus_tag=AL60_02286 NZ_KK316851.1 Protein Homology CDS 224326 224829 . + 0 ID=cds-WP_003411608.1;Parent=gene-AL60_RS16805;Dbxref=GenBank:WP_003411608.1;Name=WP_003411608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216769.1;locus_tag=AL60_RS16805;product=Rv2253 family sensor-like surface protein;protein_id=WP_003411608.1;transl_table=11 NZ_KK316851.1 RefSeq gene 224862 225317 . - . ID=gene-AL60_RS16810;Name=AL60_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16810;old_locus_tag=AL60_02287 NZ_KK316851.1 Protein Homology CDS 224862 225317 . - 0 ID=cds-WP_003411611.1;Parent=gene-AL60_RS16810;Dbxref=GenBank:WP_003411611.1;Name=WP_003411611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216770.1;locus_tag=AL60_RS16810;product=LysE family transporter;protein_id=WP_003411611.1;transl_table=11 NZ_KK316851.1 RefSeq gene 225322 225516 . - . ID=gene-AL60_RS16815;Name=AL60_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16815;old_locus_tag=AL60_02288 NZ_KK316851.1 Protein Homology CDS 225322 225516 . - 0 ID=cds-WP_003902152.1;Parent=gene-AL60_RS16815;Dbxref=GenBank:WP_003902152.1;Name=WP_003902152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030037.1;locus_tag=AL60_RS16815;product=hypothetical protein;protein_id=WP_003902152.1;transl_table=11 NZ_KK316851.1 RefSeq gene 225436 225654 . + . ID=gene-AL60_RS16820;Name=AL60_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16820;old_locus_tag=AL60_02289 NZ_KK316851.1 Protein Homology CDS 225436 225654 . + 0 ID=cds-WP_003411612.1;Parent=gene-AL60_RS16820;Dbxref=GenBank:WP_003411612.1;Name=WP_003411612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411612.1;locus_tag=AL60_RS16820;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=WP_003411612.1;transl_table=11 NZ_KK316851.1 RefSeq gene 225683 226195 . - . ID=gene-AL60_RS16825;Name=AL60_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16825;old_locus_tag=AL60_02290 NZ_KK316851.1 Protein Homology CDS 225683 226195 . - 0 ID=cds-WP_003411615.1;Parent=gene-AL60_RS16825;Dbxref=GenBank:WP_003411615.1;Name=WP_003411615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005085219.1;locus_tag=AL60_RS16825;product=DUF3145 domain-containing protein;protein_id=WP_003411615.1;transl_table=11 NZ_KK316851.1 RefSeq gene 226346 227164 . - . ID=gene-AL60_RS16830;Name=AL60_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16830;old_locus_tag=AL60_02291 NZ_KK316851.1 Protein Homology CDS 226346 227164 . - 0 ID=cds-WP_003411619.1;Parent=gene-AL60_RS16830;Dbxref=GenBank:WP_003411619.1;Name=WP_003411619.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216773.1;locus_tag=AL60_RS16830;product=serine hydrolase domain-containing protein;protein_id=WP_003411619.1;transl_table=11 NZ_KK316851.1 RefSeq gene 227178 228239 . - . ID=gene-AL60_RS16835;Name=AL60_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16835;old_locus_tag=AL60_02292 NZ_KK316851.1 Protein Homology CDS 227178 228239 . - 0 ID=cds-WP_003411622.1;Parent=gene-AL60_RS16835;Dbxref=GenBank:WP_003411622.1;Name=WP_003411622.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216774.1;locus_tag=AL60_RS16835;product=class I SAM-dependent methyltransferase;protein_id=WP_003411622.1;transl_table=11 NZ_KK316851.1 RefSeq gene 228746 229831 . + . ID=gene-AL60_RS16840;Name=mscR;gbkey=Gene;gene=mscR;gene_biotype=protein_coding;locus_tag=AL60_RS16840;old_locus_tag=AL60_02293 NZ_KK316851.1 Protein Homology CDS 228746 229831 . + 0 ID=cds-WP_003899236.1;Parent=gene-AL60_RS16840;Dbxref=GenBank:WP_003899236.1;Name=WP_003899236.1;Ontology_term=GO:0010127,GO:0050607;gbkey=CDS;gene=mscR;go_function=mycothiol-dependent formaldehyde dehydrogenase activity|0050607||IEA;go_process=mycothiol-dependent detoxification|0010127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216775.1;locus_tag=AL60_RS16840;product=S-(hydroxymethyl)mycothiol dehydrogenase;protein_id=WP_003899236.1;transl_table=11 NZ_KK316851.1 RefSeq gene 229831 230466 . + . ID=gene-AL60_RS16845;Name=AL60_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16845;old_locus_tag=AL60_02294 NZ_KK316851.1 Protein Homology CDS 229831 230466 . + 0 ID=cds-WP_003411632.1;Parent=gene-AL60_RS16845;Dbxref=GenBank:WP_003411632.1;Name=WP_003411632.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216776.1;locus_tag=AL60_RS16845;product=MBL fold metallo-hydrolase;protein_id=WP_003411632.1;transl_table=11 NZ_KK316851.1 RefSeq gene 230543 232051 . - . ID=gene-AL60_RS0104885;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AL60_RS0104885;old_locus_tag=AL60_02296 NZ_KK316851.1 Protein Homology CDS 230543 232051 . - 0 ID=cds-WP_003901363.1;Parent=gene-AL60_RS0104885;Dbxref=GenBank:WP_003901363.1;Name=WP_003901363.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901363.1;locus_tag=AL60_RS0104885;product=apolipoprotein N-acyltransferase;protein_id=WP_003901363.1;transl_table=11 NZ_KK316851.1 RefSeq gene 232140 233093 . + . ID=gene-AL60_RS16850;Name=AL60_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16850;old_locus_tag=AL60_02297 NZ_KK316851.1 Protein Homology CDS 232140 233093 . + 0 ID=cds-WP_003899238.1;Parent=gene-AL60_RS16850;Dbxref=GenBank:WP_003899238.1;Name=WP_003899238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216779.1;locus_tag=AL60_RS16850;product=SDR family oxidoreductase;protein_id=WP_003899238.1;transl_table=11 NZ_KK316851.1 RefSeq gene 233071 234849 . - . ID=gene-AL60_RS16855;Name=AL60_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16855;old_locus_tag=AL60_02298 NZ_KK316851.1 Protein Homology CDS 233071 234849 . - 0 ID=cds-WP_012054316.1;Parent=gene-AL60_RS16855;Dbxref=GenBank:WP_012054316.1;Name=WP_012054316.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216780.1;locus_tag=AL60_RS16855;product=Hsp70 family protein;protein_id=WP_012054316.1;transl_table=11 NZ_KK316851.1 RefSeq gene 235199 236428 . + . ID=gene-AL60_RS16860;Name=AL60_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16860;old_locus_tag=AL60_02299 NZ_KK316851.1 Protein Homology CDS 235199 236428 . + 0 ID=cds-WP_003899241.1;Parent=gene-AL60_RS16860;Dbxref=GenBank:WP_003899241.1;Name=WP_003899241.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216781.1;locus_tag=AL60_RS16860;product=MFS transporter;protein_id=WP_003899241.1;transl_table=11 NZ_KK316851.1 RefSeq gene 236603 237889 . + . ID=gene-AL60_RS16865;Name=cyp124;gbkey=Gene;gene=cyp124;gene_biotype=protein_coding;locus_tag=AL60_RS16865;old_locus_tag=AL60_02300 NZ_KK316851.1 Protein Homology CDS 236603 237889 . + 0 ID=cds-WP_003411654.1;Parent=gene-AL60_RS16865;Dbxref=GenBank:WP_003411654.1;Name=WP_003411654.1;gbkey=CDS;gene=cyp124;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216782.1;locus_tag=AL60_RS16865;product=methyl-branched lipid omega-hydroxylase Cyp124;protein_id=WP_003411654.1;transl_table=11 NZ_KK316851.1 RefSeq gene 238143 239309 . - . ID=gene-AL60_RS16870;Name=AL60_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16870;old_locus_tag=AL60_02301 NZ_KK316851.1 Protein Homology CDS 238143 239309 . - 0 ID=cds-WP_003411661.1;Parent=gene-AL60_RS16870;Dbxref=GenBank:WP_003411661.1;Name=WP_003411661.1;Ontology_term=GO:0008146,GO:0050656,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfotransferase activity|0008146||IEA,3'-phosphoadenosine 5'-phosphosulfate binding|0050656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216783.1;locus_tag=AL60_RS16870;product=sulfotransferase family protein;protein_id=WP_003411661.1;transl_table=11 NZ_KK316851.1 RefSeq gene 239306 240775 . - . ID=gene-AL60_RS16875;Name=AL60_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16875;old_locus_tag=AL60_02302 NZ_KK316851.1 Protein Homology CDS 239306 240775 . - 0 ID=cds-WP_003411663.1;Parent=gene-AL60_RS16875;Dbxref=GenBank:WP_003411663.1;Name=WP_003411663.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216784.1;locus_tag=AL60_RS16875;product=cytochrome P450;protein_id=WP_003411663.1;transl_table=11 NZ_KK316851.1 RefSeq gene 240788 241120 . - . ID=gene-AL60_RS16880;Name=AL60_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16880;old_locus_tag=AL60_02303 NZ_KK316851.1 Protein Homology CDS 240788 241120 . - 0 ID=cds-WP_003902155.1;Parent=gene-AL60_RS16880;Dbxref=GenBank:WP_003902155.1;Name=WP_003902155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216785.1;locus_tag=AL60_RS16880;product=hypothetical protein;protein_id=WP_003902155.1;transl_table=11 NZ_KK316851.1 RefSeq gene 241197 241724 . + . ID=gene-AL60_RS16885;Name=AL60_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16885;old_locus_tag=AL60_02304 NZ_KK316851.1 Protein Homology CDS 241197 241724 . + 0 ID=cds-WP_003411668.1;Parent=gene-AL60_RS16885;Dbxref=GenBank:WP_003411668.1;Name=WP_003411668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216786.1;locus_tag=AL60_RS16885;product=hypothetical protein;protein_id=WP_003411668.1;transl_table=11 NZ_KK316851.1 RefSeq gene 241831 242130 . + . ID=gene-AL60_RS16890;Name=AL60_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16890;old_locus_tag=AL60_02305 NZ_KK316851.1 Protein Homology CDS 241831 242130 . + 0 ID=cds-WP_003899242.1;Parent=gene-AL60_RS16890;Dbxref=GenBank:WP_003899242.1;Name=WP_003899242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216787.1;locus_tag=AL60_RS16890;product=DUF2695 domain-containing protein;protein_id=WP_003899242.1;transl_table=11 NZ_KK316851.1 RefSeq gene 242236 242604 . + . ID=gene-AL60_RS16895;Name=AL60_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16895;old_locus_tag=AL60_02306 NZ_KK316851.1 Protein Homology CDS 242236 242604 . + 0 ID=cds-WP_003411674.1;Parent=gene-AL60_RS16895;Dbxref=GenBank:WP_003411674.1;Name=WP_003411674.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216788.1;locus_tag=AL60_RS16895;product=YidH family protein;protein_id=WP_003411674.1;transl_table=11 NZ_KK316851.1 RefSeq gene 242601 242930 . + . ID=gene-AL60_RS16900;Name=AL60_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16900;old_locus_tag=AL60_02307 NZ_KK316851.1 Protein Homology CDS 242601 242930 . + 0 ID=cds-WP_003411678.1;Parent=gene-AL60_RS16900;Dbxref=GenBank:WP_003411678.1;Name=WP_003411678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216789.1;locus_tag=AL60_RS16900;product=DUF202 domain-containing protein;protein_id=WP_003411678.1;transl_table=11 NZ_KK316851.1 RefSeq gene 242987 243304 . - . ID=gene-AL60_RS16905;Name=AL60_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16905;old_locus_tag=AL60_02308 NZ_KK316851.1 Protein Homology CDS 242987 243304 . - 0 ID=cds-WP_003903830.1;Parent=gene-AL60_RS16905;Dbxref=GenBank:WP_003903830.1;Name=WP_003903830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216790.1;locus_tag=AL60_RS16905;product=toxin MazF8;protein_id=WP_003903830.1;transl_table=11 NZ_KK316851.1 RefSeq gene 243338 243586 . - . ID=gene-AL60_RS27595;Name=mazE8;gbkey=Gene;gene=mazE8;gene_biotype=protein_coding;locus_tag=AL60_RS27595;old_locus_tag=AL60_02309 NZ_KK316851.1 Protein Homology CDS 243338 243586 . - 0 ID=cds-WP_003903832.1;Parent=gene-AL60_RS27595;Dbxref=GenBank:WP_003903832.1;Name=WP_003903832.1;gbkey=CDS;gene=mazE8;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410963.1;locus_tag=AL60_RS27595;product=type II toxin-antitoxin system antitoxin MazE8;protein_id=WP_003903832.1;transl_table=11 NZ_KK316851.1 RefSeq gene 243607 244251 . + . ID=gene-AL60_RS16910;Name=AL60_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16910;old_locus_tag=AL60_02310 NZ_KK316851.1 Protein Homology CDS 243607 244251 . + 0 ID=cds-WP_229303148.1;Parent=gene-AL60_RS16910;Dbxref=GenBank:WP_229303148.1;Name=WP_229303148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04539.1;locus_tag=AL60_RS16910;product=cyclodityrosine synthase;protein_id=WP_229303148.1;transl_table=11 NZ_KK316851.1 RefSeq gene 244248 245438 . + . ID=gene-AL60_RS16915;Name=cyp121;gbkey=Gene;gene=cyp121;gene_biotype=protein_coding;locus_tag=AL60_RS16915;old_locus_tag=AL60_02311 NZ_KK316851.1 Protein Homology CDS 244248 245438 . + 0 ID=cds-WP_003411685.1;Parent=gene-AL60_RS16915;Dbxref=GenBank:WP_003411685.1;Name=WP_003411685.1;gbkey=CDS;gene=cyp121;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216792.1;locus_tag=AL60_RS16915;product=mycocyclosin synthase Cyp121;protein_id=WP_003411685.1;transl_table=11 NZ_KK316851.1 RefSeq gene 245623 246522 . - . ID=gene-AL60_RS16920;Name=AL60_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16920;old_locus_tag=AL60_02312 NZ_KK316851.1 Protein Homology CDS 245623 246522 . - 0 ID=cds-WP_003411688.1;Parent=gene-AL60_RS16920;Dbxref=GenBank:WP_003411688.1;Name=WP_003411688.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411688.1;locus_tag=AL60_RS16920;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_003411688.1;transl_table=11 NZ_KK316851.1 RefSeq gene 246701 248080 . + . ID=gene-AL60_RS16925;Name=AL60_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16925;old_locus_tag=AL60_02313 NZ_KK316851.1 Protein Homology CDS 246701 248080 . + 0 ID=cds-WP_003411690.1;Parent=gene-AL60_RS16925;Dbxref=GenBank:WP_003411690.1;Name=WP_003411690.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293581.1;locus_tag=AL60_RS16925;product=FAD-binding oxidoreductase;protein_id=WP_003411690.1;transl_table=11 NZ_KK316851.1 RefSeq gene 248314 249972 . + . ID=gene-AL60_RS16930;Name=pitB;gbkey=Gene;gene=pitB;gene_biotype=protein_coding;locus_tag=AL60_RS16930;old_locus_tag=AL60_02314 NZ_KK316851.1 Protein Homology CDS 248314 249972 . + 0 ID=cds-WP_049955264.1;Parent=gene-AL60_RS16930;Dbxref=GenBank:WP_049955264.1;Name=WP_049955264.1;Ontology_term=GO:0006817,GO:0005315,GO:0016020;gbkey=CDS;gene=pitB;go_component=membrane|0016020||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216797.1;locus_tag=AL60_RS16930;product=inorganic phosphate transporter;protein_id=WP_049955264.1;transl_table=11 NZ_KK316851.1 RefSeq gene 250079 251017 . - . ID=gene-AL60_RS16935;Name=AL60_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16935;old_locus_tag=AL60_02315 NZ_KK316851.1 Protein Homology CDS 250079 251017 . - 0 ID=cds-WP_003411696.1;Parent=gene-AL60_RS16935;Dbxref=GenBank:WP_003411696.1;Name=WP_003411696.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216798.1;locus_tag=AL60_RS16935;product=LysR family transcriptional regulator;protein_id=WP_003411696.1;transl_table=11 NZ_KK316851.1 RefSeq gene 251066 251287 . - . ID=gene-AL60_RS28150;Name=AL60_RS28150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28150 NZ_KK316851.1 GeneMarkS-2+ CDS 251066 251287 . - 0 ID=cds-WP_015385286.1;Parent=gene-AL60_RS28150;Dbxref=GenBank:WP_015385286.1;Name=WP_015385286.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS28150;product=hypothetical protein;protein_id=WP_015385286.1;transl_table=11 NZ_KK316851.1 RefSeq gene 251286 252581 . + . ID=gene-AL60_RS16940;Name=lipM;gbkey=Gene;gene=lipM;gene_biotype=protein_coding;locus_tag=AL60_RS16940;old_locus_tag=AL60_02317 NZ_KK316851.1 Protein Homology CDS 251286 252581 . + 0 ID=cds-WP_003899248.1;Parent=gene-AL60_RS16940;Dbxref=GenBank:WP_003899248.1;Name=WP_003899248.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipM;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216800.1;locus_tag=AL60_RS16940;product=alpha/beta hydrolase;protein_id=WP_003899248.1;transl_table=11 NZ_KK316851.1 RefSeq gene 252614 253951 . + . ID=gene-AL60_RS16945;Name=AL60_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16945;old_locus_tag=AL60_02318 NZ_KK316851.1 Protein Homology CDS 252614 253951 . + 0 ID=cds-WP_003411704.1;Parent=gene-AL60_RS16945;Dbxref=GenBank:WP_003411704.1;Name=WP_003411704.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216801.1;locus_tag=AL60_RS16945;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003411704.1;transl_table=11 NZ_KK316851.1 RefSeq gene 254018 254710 . - . ID=gene-AL60_RS16950;Name=AL60_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16950;old_locus_tag=AL60_02319 NZ_KK316851.1 Protein Homology CDS 254018 254710 . - 0 ID=cds-WP_003411707.1;Parent=gene-AL60_RS16950;Dbxref=GenBank:WP_003411707.1;Name=WP_003411707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216802.1;locus_tag=AL60_RS16950;product=mycothiol-dependent nitroreductase Rv2466c family protein;protein_id=WP_003411707.1;transl_table=11 NZ_KK316851.1 RefSeq gene 254880 256472 . + . ID=gene-AL60_RS16955;Name=yjcE;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;locus_tag=AL60_RS16955;old_locus_tag=AL60_02320 NZ_KK316851.1 Protein Homology CDS 254880 256472 . + 0 ID=cds-WP_003916985.1;Parent=gene-AL60_RS16955;Dbxref=GenBank:WP_003916985.1;Name=WP_003916985.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;gene=yjcE;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916985.1;locus_tag=AL60_RS16955;product=Na+/H+ antiporter;protein_id=WP_003916985.1;transl_table=11 NZ_KK316851.1 RefSeq gene 256469 256846 . + . ID=gene-AL60_RS16960;Name=AL60_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16960;old_locus_tag=AL60_02321 NZ_KK316851.1 Protein Homology CDS 256469 256846 . + 0 ID=cds-WP_031721508.1;Parent=gene-AL60_RS16960;Dbxref=GenBank:WP_031721508.1;Name=WP_031721508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216804.1;locus_tag=AL60_RS16960;product=hypothetical protein;protein_id=WP_031721508.1;transl_table=11 NZ_KK316851.1 RefSeq pseudogene 256816 257598 . + . ID=gene-AL60_RS0104900;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=pseudogene;locus_tag=AL60_RS0104900;pseudo=true NZ_KK316851.1 Protein Homology CDS 256816 257598 . + 0 ID=cds-AL60_RS0104900;Parent=gene-AL60_RS0104900;Note=internal stop;gbkey=CDS;gene=cdh;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216805.1;locus_tag=AL60_RS0104900;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 NZ_KK316851.1 RefSeq gene 257740 258255 . + . ID=gene-AL60_RS16965;Name=lppO;gbkey=Gene;gene=lppO;gene_biotype=protein_coding;locus_tag=AL60_RS16965;old_locus_tag=AL60_02323 NZ_KK316851.1 Protein Homology CDS 257740 258255 . + 0 ID=cds-WP_003900493.1;Parent=gene-AL60_RS16965;Dbxref=GenBank:WP_003900493.1;Name=WP_003900493.1;Ontology_term=GO:0016020;gbkey=CDS;gene=lppO;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216806.1;locus_tag=AL60_RS16965;product=lipoprotein LpqH;protein_id=WP_003900493.1;transl_table=11 NZ_KK316851.1 RefSeq gene 258315 259169 . + . ID=gene-AL60_RS16970;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=AL60_RS16970;old_locus_tag=AL60_02324 NZ_KK316851.1 Protein Homology CDS 258315 259169 . + 0 ID=cds-WP_003899253.1;Parent=gene-AL60_RS16970;Dbxref=GenBank:WP_003899253.1;Name=WP_003899253.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;gene=sseB;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216807.1;locus_tag=AL60_RS16970;product=sulfurtransferase;protein_id=WP_003899253.1;transl_table=11 NZ_KK316851.1 RefSeq gene 259170 259394 . - . ID=gene-AL60_RS27600;Name=AL60_RS27600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27600;old_locus_tag=AL60_02325 NZ_KK316851.1 Protein Homology CDS 259170 259394 . - 0 ID=cds-WP_003411731.1;Parent=gene-AL60_RS27600;Dbxref=GenBank:WP_003411731.1;Name=WP_003411731.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013232.6;locus_tag=AL60_RS27600;product=phosphorylase family protein;protein_id=WP_003411731.1;transl_table=11 NZ_KK316851.1 RefSeq gene 259433 260143 . - . ID=gene-AL60_RS16980;Name=AL60_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16980;old_locus_tag=AL60_02326 NZ_KK316851.1 Protein Homology CDS 259433 260143 . - 0 ID=cds-WP_003917609.1;Parent=gene-AL60_RS16980;Dbxref=GenBank:WP_003917609.1;Name=WP_003917609.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013232.6;locus_tag=AL60_RS16980;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase family protein;protein_id=WP_003917609.1;transl_table=11 NZ_KK316851.1 RefSeq gene 260468 261691 . + . ID=gene-AL60_RS16985;Name=AL60_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16985;old_locus_tag=AL60_02327 NZ_KK316851.1 Protein Homology CDS 260468 261691 . + 0 ID=cds-WP_003899255.1;Parent=gene-AL60_RS16985;Dbxref=GenBank:WP_003899255.1;Name=WP_003899255.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216810.1;locus_tag=AL60_RS16985;product=MalY/PatB family protein;protein_id=WP_003899255.1;transl_table=11 NZ_KK316851.1 RefSeq gene 261913 262551 . + . ID=gene-AL60_RS16990;Name=AL60_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16990;old_locus_tag=AL60_02328 NZ_KK316851.1 Protein Homology CDS 261913 262551 . + 0 ID=cds-WP_003899256.1;Parent=gene-AL60_RS16990;Dbxref=GenBank:WP_003899256.1;Name=WP_003899256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216811.1;locus_tag=AL60_RS16990;product=CbrC family protein;protein_id=WP_003899256.1;transl_table=11 NZ_KK316851.1 RefSeq gene 262645 263547 . + . ID=gene-AL60_RS16995;Name=AL60_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS16995;old_locus_tag=AL60_02329 NZ_KK316851.1 Protein Homology CDS 262645 263547 . + 0 ID=cds-WP_003411849.1;Parent=gene-AL60_RS16995;Dbxref=GenBank:WP_003411849.1;Name=WP_003411849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216812.1;locus_tag=AL60_RS16995;product=haloalkane dehalogenase;protein_id=WP_003411849.1;transl_table=11 NZ_KK316851.1 RefSeq gene 263579 264031 . + . ID=gene-AL60_RS17000;Name=AL60_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17000;old_locus_tag=AL60_02330 NZ_KK316851.1 Protein Homology CDS 263579 264031 . + 0 ID=cds-WP_003411851.1;Parent=gene-AL60_RS17000;Dbxref=GenBank:WP_003411851.1;Name=WP_003411851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216813.1;locus_tag=AL60_RS17000;product=hypothetical protein;protein_id=WP_003411851.1;transl_table=11 NZ_KK316851.1 RefSeq gene 264223 265194 . + . ID=gene-AL60_RS17005;Name=AL60_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17005;old_locus_tag=AL60_02331 NZ_KK316851.1 Protein Homology CDS 264223 265194 . + 0 ID=cds-WP_003902161.1;Parent=gene-AL60_RS17005;Dbxref=GenBank:WP_003902161.1;Name=WP_003902161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216814.1;locus_tag=AL60_RS17005;product=aldo/keto reductase;protein_id=WP_003902161.1;transl_table=11 NZ_KK316851.1 RefSeq gene 265200 267143 . - . ID=gene-AL60_RS17010;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AL60_RS17010;old_locus_tag=AL60_02332 NZ_KK316851.1 Protein Homology CDS 265200 267143 . - 0 ID=cds-WP_003411855.1;Parent=gene-AL60_RS17010;Dbxref=GenBank:WP_003411855.1;Name=WP_003411855.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216815.1;locus_tag=AL60_RS17010;product=molecular chaperone HtpG;protein_id=WP_003411855.1;transl_table=11 NZ_KK316851.1 RefSeq gene 267217 267999 . - . ID=gene-AL60_RS17015;Name=AL60_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17015;old_locus_tag=AL60_02333 NZ_KK316851.1 Protein Homology CDS 267217 267999 . - 0 ID=cds-WP_003911838.1;Parent=gene-AL60_RS17015;Dbxref=GenBank:WP_003911838.1;Name=WP_003911838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911838.1;locus_tag=AL60_RS17015;product=MBL fold metallo-hydrolase;protein_id=WP_003911838.1;transl_table=11 NZ_KK316851.1 RefSeq gene 268156 268848 . + . ID=gene-AL60_RS17020;Name=AL60_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17020;old_locus_tag=AL60_02334 NZ_KK316851.1 Protein Homology CDS 268156 268848 . + 0 ID=cds-WP_003411863.1;Parent=gene-AL60_RS17020;Dbxref=GenBank:WP_003411863.1;Name=WP_003411863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216817.2;locus_tag=AL60_RS17020;product=cutinase family protein;protein_id=WP_003411863.1;transl_table=11 NZ_KK316851.1 RefSeq gene 268954 269196 . + . ID=gene-AL60_RS17025;Name=AL60_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17025;old_locus_tag=AL60_02335 NZ_KK316851.1 Protein Homology CDS 268954 269196 . + 0 ID=cds-WP_003411866.1;Parent=gene-AL60_RS17025;Dbxref=GenBank:WP_003411866.1;Name=WP_003411866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216818.1;locus_tag=AL60_RS17025;product=DUF1918 domain-containing protein;protein_id=WP_003411866.1;transl_table=11 NZ_KK316851.1 RefSeq gene 269237 270160 . - . ID=gene-AL60_RS17030;Name=AL60_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17030;old_locus_tag=AL60_02336 NZ_KK316851.1 Protein Homology CDS 269237 270160 . - 0 ID=cds-WP_003411868.1;Parent=gene-AL60_RS17030;Dbxref=GenBank:WP_003411868.1;Name=WP_003411868.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216819.1;locus_tag=AL60_RS17030;product=amidohydrolase family protein;protein_id=WP_003411868.1;transl_table=11 NZ_KK316851.1 RefSeq gene 270157 270366 . - . ID=gene-AL60_RS17035;Name=AL60_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17035;old_locus_tag=AL60_02337 NZ_KK316851.1 Protein Homology CDS 270157 270366 . - 0 ID=cds-WP_003411870.1;Parent=gene-AL60_RS17035;Dbxref=GenBank:WP_003411870.1;Name=WP_003411870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216820.1;locus_tag=AL60_RS17035;product=hypothetical protein;protein_id=WP_003411870.1;transl_table=11 NZ_KK316851.1 RefSeq gene 270950 272239 . + . ID=gene-AL60_RS17040;Name=AL60_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17040;old_locus_tag=AL60_02338 NZ_KK316851.1 Protein Homology CDS 270950 272239 . + 0 ID=cds-WP_003899261.1;Parent=gene-AL60_RS17040;Dbxref=GenBank:WP_003899261.1;Name=WP_003899261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216821.1;locus_tag=AL60_RS17040;product=hypothetical protein;protein_id=WP_003899261.1;transl_table=11 NZ_KK316851.1 RefSeq pseudogene 272249 272904 . + . ID=gene-AL60_RS27325;Name=AL60_RS27325;end_range=272904,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27325;old_locus_tag=AL60_02339;partial=true;pseudo=true NZ_KK316851.1 Protein Homology CDS 272249 272904 . + 0 ID=cds-AL60_RS27325;Parent=gene-AL60_RS27325;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;end_range=272904,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015305669.1;locus_tag=AL60_RS27325;partial=true;product=TVP38/TMEM64 family protein;pseudo=true;transl_table=11 NZ_KK316851.1 RefSeq gene 272992 273837 . - . ID=gene-AL60_RS17050;Name=AL60_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17050;old_locus_tag=AL60_02341 NZ_KK316851.1 Protein Homology CDS 272992 273837 . - 0 ID=cds-WP_003906792.1;Parent=gene-AL60_RS17050;Dbxref=GenBank:WP_003906792.1;Name=WP_003906792.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216823.1;locus_tag=AL60_RS17050;product=alpha/beta hydrolase;protein_id=WP_003906792.1;transl_table=11 NZ_KK316851.1 RefSeq gene 273994 274338 . - . ID=gene-AL60_RS26050;Name=AL60_RS26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26050 NZ_KK316851.1 Protein Homology CDS 273994 274338 . - 0 ID=cds-WP_071854221.1;Parent=gene-AL60_RS26050;Dbxref=GenBank:WP_071854221.1;Name=WP_071854221.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024001.6;locus_tag=AL60_RS26050;product=DUF3761 domain-containing protein;protein_id=WP_071854221.1;transl_table=11 NZ_KK316851.1 RefSeq gene 274369 274560 . - . ID=gene-AL60_RS17055;Name=AL60_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17055;old_locus_tag=AL60_02342 NZ_KK316851.1 Protein Homology CDS 274369 274560 . - 0 ID=cds-WP_003899264.1;Parent=gene-AL60_RS17055;Dbxref=GenBank:WP_003899264.1;Name=WP_003899264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177665.1;locus_tag=AL60_RS17055;product=hypothetical protein;protein_id=WP_003899264.1;transl_table=11 NZ_KK316851.1 RefSeq gene 274645 275076 . - . ID=gene-AL60_RS17060;Name=AL60_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17060;old_locus_tag=AL60_02343 NZ_KK316851.1 Protein Homology CDS 274645 275076 . - 0 ID=cds-WP_003899265.1;Parent=gene-AL60_RS17060;Dbxref=GenBank:WP_003899265.1;Name=WP_003899265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177666.1;locus_tag=AL60_RS17060;product=hypothetical protein;protein_id=WP_003899265.1;transl_table=11 NZ_KK316851.1 RefSeq gene 275169 275351 . - . ID=gene-AL60_RS17065;Name=AL60_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17065;old_locus_tag=AL60_02344 NZ_KK316851.1 Protein Homology CDS 275169 275351 . - 0 ID=cds-WP_003902166.1;Parent=gene-AL60_RS17065;Dbxref=GenBank:WP_003902166.1;Name=WP_003902166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177667.1;locus_tag=AL60_RS17065;product=hypothetical protein;protein_id=WP_003902166.1;transl_table=11 NZ_KK316851.1 RefSeq gene 275560 276276 . + . ID=gene-AL60_RS17070;Name=AL60_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17070;old_locus_tag=AL60_02345 NZ_KK316851.1 Protein Homology CDS 275560 276276 . + 0 ID=cds-WP_003411885.1;Parent=gene-AL60_RS17070;Dbxref=GenBank:WP_003411885.1;Name=WP_003411885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216824.1;locus_tag=AL60_RS17070;product=DUF433 domain-containing protein;protein_id=WP_003411885.1;transl_table=11 NZ_KK316851.1 RefSeq gene 276286 276618 . + . ID=gene-AL60_RS0104905;Name=AL60_RS0104905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104905 NZ_KK316851.1 Protein Homology CDS 276286 276618 . + 0 ID=cds-WP_003411888.1;Parent=gene-AL60_RS0104905;Dbxref=GenBank:WP_003411888.1;Name=WP_003411888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030038.1;locus_tag=AL60_RS0104905;product=hypothetical protein;protein_id=WP_003411888.1;transl_table=11 NZ_KK316851.1 RefSeq gene 276905 276978 . - . ID=gene-AL60_RS17075;Name=AL60_RS17075;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS17075;old_locus_tag=AL60_02346 NZ_KK316851.1 tRNAscan-SE tRNA 276905 276978 . - . ID=rna-AL60_RS17075;Parent=gene-AL60_RS17075;anticodon=(pos:complement(276942..276944));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS17075;product=tRNA-Ile NZ_KK316851.1 tRNAscan-SE exon 276905 276978 . - . ID=exon-AL60_RS17075-1;Parent=rna-AL60_RS17075;anticodon=(pos:complement(276942..276944));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS17075;product=tRNA-Ile NZ_KK316851.1 RefSeq gene 276984 277439 . - . ID=gene-AL60_RS17080;Name=AL60_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17080;old_locus_tag=AL60_02347 NZ_KK316851.1 Protein Homology CDS 276984 277439 . - 0 ID=cds-WP_003899267.1;Parent=gene-AL60_RS17080;Dbxref=GenBank:WP_003899267.1;Name=WP_003899267.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901373.1;locus_tag=AL60_RS17080;product=site-specific integrase;protein_id=WP_003899267.1;transl_table=11 NZ_KK316851.1 RefSeq gene 277456 277581 . - . ID=gene-AL60_RS27330;Name=AL60_RS27330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27330 NZ_KK316851.1 Protein Homology CDS 277456 277581 . - 0 ID=cds-WP_003909645.1;Parent=gene-AL60_RS27330;Dbxref=GenBank:WP_003909645.1;Name=WP_003909645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909645.1;locus_tag=AL60_RS27330;product=hypothetical protein;protein_id=WP_003909645.1;transl_table=11 NZ_KK316851.1 RefSeq gene 277618 277785 . - . ID=gene-AL60_RS27165;Name=AL60_RS27165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27165;old_locus_tag=AL60_02348 NZ_KK316851.1 Protein Homology CDS 277618 277785 . - 0 ID=cds-WP_003907913.1;Parent=gene-AL60_RS27165;Dbxref=GenBank:WP_003907913.1;Name=WP_003907913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003907913.1;locus_tag=AL60_RS27165;product=hypothetical protein;protein_id=WP_003907913.1;transl_table=11 NZ_KK316851.1 RefSeq gene 278186 278473 . + . ID=gene-AL60_RS17085;Name=AL60_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17085;old_locus_tag=AL60_02349 NZ_KK316851.1 Protein Homology CDS 278186 278473 . + 0 ID=cds-WP_003902168.1;Parent=gene-AL60_RS17085;Dbxref=GenBank:WP_003902168.1;Name=WP_003902168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177668.1;locus_tag=AL60_RS17085;product=hypothetical protein;protein_id=WP_003902168.1;transl_table=11 NZ_KK316851.1 RefSeq gene 278579 278920 . + . ID=gene-AL60_RS17090;Name=AL60_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17090;old_locus_tag=AL60_02350 NZ_KK316851.1 Protein Homology CDS 278579 278920 . + 0 ID=cds-WP_003901374.1;Parent=gene-AL60_RS17090;Dbxref=GenBank:WP_003901374.1;Name=WP_003901374.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901374.1;locus_tag=AL60_RS17090;product=helix-turn-helix domain-containing protein;protein_id=WP_003901374.1;transl_table=11 NZ_KK316851.1 RefSeq gene 278953 279549 . + . ID=gene-AL60_RS17095;Name=AL60_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17095;old_locus_tag=AL60_02351 NZ_KK316851.1 Protein Homology CDS 278953 279549 . + 0 ID=cds-WP_003899268.1;Parent=gene-AL60_RS17095;Dbxref=GenBank:WP_003899268.1;Name=WP_003899268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585278.1;locus_tag=AL60_RS17095;product=hypothetical protein;protein_id=WP_003899268.1;transl_table=11 NZ_KK316851.1 RefSeq gene 279627 279896 . + . ID=gene-AL60_RS17100;Name=AL60_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17100;old_locus_tag=AL60_02352 NZ_KK316851.1 Protein Homology CDS 279627 279896 . + 0 ID=cds-WP_003411919.1;Parent=gene-AL60_RS17100;Dbxref=GenBank:WP_003411919.1;Name=WP_003411919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216828.1;locus_tag=AL60_RS17100;product=hypothetical protein;protein_id=WP_003411919.1;transl_table=11 NZ_KK316851.1 RefSeq gene 280193 281047 . - . ID=gene-AL60_RS17105;Name=AL60_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17105;old_locus_tag=AL60_02353 NZ_KK316851.1 Protein Homology CDS 280193 281047 . - 0 ID=cds-WP_003411924.1;Parent=gene-AL60_RS17105;Dbxref=GenBank:WP_003411924.1;Name=WP_003411924.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216829.1;locus_tag=AL60_RS17105;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003411924.1;transl_table=11 NZ_KK316851.1 RefSeq gene 281058 282431 . - . ID=gene-AL60_RS17110;Name=AL60_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17110;old_locus_tag=AL60_02354 NZ_KK316851.1 Protein Homology CDS 281058 282431 . - 0 ID=cds-WP_003899270.1;Parent=gene-AL60_RS17110;Dbxref=GenBank:WP_003899270.1;Name=WP_003899270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216830.1;locus_tag=AL60_RS17110;product=TldD/PmbA family protein;protein_id=WP_003899270.1;transl_table=11 NZ_KK316851.1 RefSeq gene 282428 283945 . - . ID=gene-AL60_RS17115;Name=AL60_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17115;old_locus_tag=AL60_02355 NZ_KK316851.1 Protein Homology CDS 282428 283945 . - 0 ID=cds-WP_003411929.1;Parent=gene-AL60_RS17115;Dbxref=GenBank:WP_003411929.1;Name=WP_003411929.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216831.1;locus_tag=AL60_RS17115;product=TldD/PmbA family protein;protein_id=WP_003411929.1;transl_table=11 NZ_KK316851.1 RefSeq gene 283979 284851 . + . ID=gene-AL60_RS17120;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=AL60_RS17120;old_locus_tag=AL60_02356 NZ_KK316851.1 Protein Homology CDS 283979 284851 . + 0 ID=cds-WP_003906794.1;Parent=gene-AL60_RS17120;Dbxref=GenBank:WP_003906794.1;Name=WP_003906794.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=uspA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216832.1;locus_tag=AL60_RS17120;product=carbohydrate ABC transporter permease;protein_id=WP_003906794.1;transl_table=11 NZ_KK316851.1 RefSeq gene 284838 285662 . + . ID=gene-AL60_RS17125;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=AL60_RS17125;old_locus_tag=AL60_02357 NZ_KK316851.1 Protein Homology CDS 284838 285662 . + 0 ID=cds-WP_003411946.1;Parent=gene-AL60_RS17125;Dbxref=GenBank:WP_003411946.1;Name=WP_003411946.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=uspB;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177866.1;locus_tag=AL60_RS17125;product=carbohydrate ABC transporter permease;protein_id=WP_003411946.1;transl_table=11 NZ_KK316851.1 RefSeq gene 285659 286981 . + . ID=gene-AL60_RS17130;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=AL60_RS17130;old_locus_tag=AL60_02358 NZ_KK316851.1 Protein Homology CDS 285659 286981 . + 0 ID=cds-WP_003411947.1;Parent=gene-AL60_RS17130;Dbxref=GenBank:WP_003411947.1;Name=WP_003411947.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=uspC;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216834.1;locus_tag=AL60_RS17130;product=ABC transporter substrate-binding protein;protein_id=WP_003411947.1;transl_table=11 NZ_KK316851.1 RefSeq gene 286989 287867 . - . ID=gene-AL60_RS17135;Name=AL60_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17135;old_locus_tag=AL60_02359 NZ_KK316851.1 Protein Homology CDS 286989 287867 . - 0 ID=cds-WP_003411952.1;Parent=gene-AL60_RS17135;Dbxref=GenBank:WP_003411952.1;Name=WP_003411952.1;Ontology_term=GO:0050896,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216835.1;locus_tag=AL60_RS17135;product=universal stress protein;protein_id=WP_003411952.1;transl_table=11 NZ_KK316851.1 RefSeq gene 287864 289294 . - . ID=gene-AL60_RS17140;Name=rocE;gbkey=Gene;gene=rocE;gene_biotype=protein_coding;locus_tag=AL60_RS17140;old_locus_tag=AL60_02360 NZ_KK316851.1 Protein Homology CDS 287864 289294 . - 0 ID=cds-WP_003411955.1;Parent=gene-AL60_RS17140;Dbxref=GenBank:WP_003411955.1;Name=WP_003411955.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rocE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216836.1;locus_tag=AL60_RS17140;product=amino acid permease;protein_id=WP_003411955.1;transl_table=11 NZ_KK316851.1 RefSeq pseudogene 289295 290505 . - . ID=gene-AL60_RS27935;Name=AL60_RS27935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27935;pseudo=true NZ_KK316851.1 Protein Homology CDS 289295 290505 . - 0 ID=cds-AL60_RS27935;Parent=gene-AL60_RS27935;Note=frameshifted;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: protein motif:HMM:NF012428.6;locus_tag=AL60_RS27935;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 NZ_KK316851.1 RefSeq gene 290502 291350 . - . ID=gene-AL60_RS17155;Name=ddaH;gbkey=Gene;gene=ddaH;gene_biotype=protein_coding;locus_tag=AL60_RS17155;old_locus_tag=AL60_02363 NZ_KK316851.1 Protein Homology CDS 290502 291350 . - 0 ID=cds-WP_003914884.1;Parent=gene-AL60_RS17155;Dbxref=GenBank:WP_003914884.1;Name=WP_003914884.1;Ontology_term=GO:0016403;gbkey=CDS;gene=ddaH;go_function=dimethylargininase activity|0016403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872468.1;locus_tag=AL60_RS17155;product=dimethylargininase;protein_id=WP_003914884.1;transl_table=11 NZ_KK316851.1 RefSeq gene 291475 291921 . + . ID=gene-AL60_RS17160;Name=AL60_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17160;old_locus_tag=AL60_02364 NZ_KK316851.1 Protein Homology CDS 291475 291921 . + 0 ID=cds-WP_003411963.1;Parent=gene-AL60_RS17160;Dbxref=GenBank:WP_003411963.1;Name=WP_003411963.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216840.1;locus_tag=AL60_RS17160;product=Rv2324 family transcriptional regulator;protein_id=WP_003411963.1;transl_table=11 NZ_KK316851.1 RefSeq gene 292150 292998 . - . ID=gene-AL60_RS17165;Name=AL60_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17165;old_locus_tag=AL60_02365 NZ_KK316851.1 Protein Homology CDS 292150 292998 . - 0 ID=cds-WP_003411966.1;Parent=gene-AL60_RS17165;Dbxref=GenBank:WP_003411966.1;Name=WP_003411966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216841.1;locus_tag=AL60_RS17165;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_003411966.1;transl_table=11 NZ_KK316851.1 RefSeq gene 292995 295043 . - . ID=gene-AL60_RS17170;Name=AL60_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17170;old_locus_tag=AL60_02366 NZ_KK316851.1 Protein Homology CDS 292995 295043 . - 0 ID=cds-WP_369810405.1;Parent=gene-AL60_RS17170;Dbxref=GenBank:WP_369810405.1;Name=WP_369810405.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014816547.1;locus_tag=AL60_RS17170;product=ABC transporter ATP-binding protein;protein_id=WP_369810405.1;transl_table=11 NZ_KK316851.1 RefSeq gene 295129 295620 . + . ID=gene-AL60_RS17175;Name=AL60_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17175;old_locus_tag=AL60_02367 NZ_KK316851.1 Protein Homology CDS 295129 295620 . + 0 ID=cds-WP_003411970.1;Parent=gene-AL60_RS17175;Dbxref=GenBank:WP_003411970.1;Name=WP_003411970.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216843.1;locus_tag=AL60_RS17175;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003411970.1;transl_table=11 NZ_KK316851.1 RefSeq gene 295655 295843 . + . ID=gene-AL60_RS27940;Name=AL60_RS27940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27940 NZ_KK316851.1 Protein Homology CDS 295655 295843 . + 0 ID=cds-WP_003411971.1;Parent=gene-AL60_RS27940;Dbxref=GenBank:WP_003411971.1;Name=WP_003411971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411971.1;locus_tag=AL60_RS27940;product=hypothetical protein;protein_id=WP_003411971.1;transl_table=11 NZ_KK316851.1 RefSeq gene 295872 297020 . + . ID=gene-AL60_RS17180;Name=AL60_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17180;old_locus_tag=AL60_02368 NZ_KK316851.1 Protein Homology CDS 295872 297020 . + 0 ID=cds-WP_003411972.1;Parent=gene-AL60_RS17180;Dbxref=GenBank:WP_003411972.1;Name=WP_003411972.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177867.1;locus_tag=AL60_RS17180;product=PE family protein;protein_id=WP_003411972.1;transl_table=11 NZ_KK316851.1 RefSeq gene 297055 298602 . - . ID=gene-AL60_RS17185;Name=AL60_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17185;old_locus_tag=AL60_02369 NZ_KK316851.1 Protein Homology CDS 297055 298602 . - 0 ID=cds-WP_003411973.1;Parent=gene-AL60_RS17185;Dbxref=GenBank:WP_003411973.1;Name=WP_003411973.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216845.1;locus_tag=AL60_RS17185;product=nitrate/nitrite transporter;protein_id=WP_003411973.1;transl_table=11 NZ_KK316851.1 RefSeq gene 298836 299372 . - . ID=gene-AL60_RS17190;Name=lppP;gbkey=Gene;gene=lppP;gene_biotype=protein_coding;locus_tag=AL60_RS17190;old_locus_tag=AL60_02370 NZ_KK316851.1 Protein Homology CDS 298836 299372 . - 0 ID=cds-WP_003902170.1;Parent=gene-AL60_RS17190;Dbxref=GenBank:WP_003902170.1;Name=WP_003902170.1;gbkey=CDS;gene=lppP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216846.1;locus_tag=AL60_RS17190;product=LppP/LprE family lipoprotein;protein_id=WP_003902170.1;transl_table=11 NZ_KK316851.1 RefSeq gene 299447 299833 . + . ID=gene-AL60_RS17195;Name=AL60_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17195;old_locus_tag=AL60_02371 NZ_KK316851.1 Protein Homology CDS 299447 299833 . + 0 ID=cds-WP_003411975.1;Parent=gene-AL60_RS17195;Dbxref=GenBank:WP_003411975.1;Name=WP_003411975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216847.1;locus_tag=AL60_RS17195;product=hypothetical protein;protein_id=WP_003411975.1;transl_table=11 NZ_KK316851.1 RefSeq gene 300100 300228 . + . ID=gene-AL60_RS27835;Name=AL60_RS27835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27835 NZ_KK316851.1 GeneMarkS-2+ CDS 300100 300228 . + 0 ID=cds-WP_003916988.1;Parent=gene-AL60_RS27835;Dbxref=GenBank:WP_003916988.1;Name=WP_003916988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS27835;product=hypothetical protein;protein_id=WP_003916988.1;transl_table=11 NZ_KK316851.1 RefSeq gene 300258 301904 . + . ID=gene-AL60_RS17205;Name=mez;gbkey=Gene;gene=mez;gene_biotype=protein_coding;locus_tag=AL60_RS17205;old_locus_tag=AL60_02373 NZ_KK316851.1 Protein Homology CDS 300258 301904 . + 0 ID=cds-WP_003899273.1;Parent=gene-AL60_RS17205;Dbxref=GenBank:WP_003899273.1;Name=WP_003899273.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;gene=mez;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216848.2;locus_tag=AL60_RS17205;product=NAD-dependent malic enzyme;protein_id=WP_003899273.1;transl_table=11 NZ_KK316851.1 RefSeq gene 301858 303471 . - . ID=gene-AL60_RS17210;Name=stp;gbkey=Gene;gene=stp;gene_biotype=protein_coding;locus_tag=AL60_RS17210;old_locus_tag=AL60_02374 NZ_KK316851.1 Protein Homology CDS 301858 303471 . - 0 ID=cds-WP_003906797.1;Parent=gene-AL60_RS17210;Dbxref=GenBank:WP_003906797.1;Name=WP_003906797.1;gbkey=CDS;gene=stp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216849.1;locus_tag=AL60_RS17210;product=multidrug resistance protein Stp;protein_id=WP_003906797.1;transl_table=11 NZ_KK316851.1 RefSeq gene 303676 303744 . + . ID=gene-AL60_RS27945;Name=AL60_RS27945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27945 NZ_KK316851.1 Protein Homology CDS 303676 303744 . + 0 ID=cds-WP_306921051.1;Parent=gene-AL60_RS27945;Dbxref=GenBank:WP_306921051.1;Name=WP_306921051.1;Note=Zero WPs at creation%2C it seemed. Model will need a rebuild once some become available. Manually created WP_306921051.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042939.1;locus_tag=AL60_RS27945;product=Rv2334A family Cys-rich leader peptide;protein_id=WP_306921051.1;transl_table=11 NZ_KK316851.1 RefSeq gene 303946 304878 . + . ID=gene-AL60_RS17215;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=AL60_RS17215;old_locus_tag=AL60_02375 NZ_KK316851.1 Protein Homology CDS 303946 304878 . + 0 ID=cds-WP_003899275.1;Parent=gene-AL60_RS17215;Dbxref=GenBank:WP_003899275.1;Name=WP_003899275.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177868.1;locus_tag=AL60_RS17215;product=O-acetylserine sulfhydrylase;protein_id=WP_003899275.1;transl_table=11 NZ_KK316851.1 RefSeq gene 304882 305571 . + . ID=gene-AL60_RS17220;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=AL60_RS17220;old_locus_tag=AL60_02376 NZ_KK316851.1 Protein Homology CDS 304882 305571 . + 0 ID=cds-WP_003411985.1;Parent=gene-AL60_RS17220;Dbxref=GenBank:WP_003411985.1;Name=WP_003411985.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216851.1;locus_tag=AL60_RS17220;product=serine O-acetyltransferase;protein_id=WP_003411985.1;transl_table=11 NZ_KK316851.1 RefSeq gene 305987 306955 . + . ID=gene-AL60_RS17225;Name=AL60_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17225;old_locus_tag=AL60_02377 NZ_KK316851.1 Protein Homology CDS 305987 306955 . + 0 ID=cds-WP_003411992.1;Parent=gene-AL60_RS17225;Dbxref=GenBank:WP_003411992.1;Name=WP_003411992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216852.1;locus_tag=AL60_RS17225;product=hypothetical protein;protein_id=WP_003411992.1;transl_table=11 NZ_KK316851.1 RefSeq gene 307019 308137 . - . ID=gene-AL60_RS17230;Name=AL60_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17230;old_locus_tag=AL60_02378 NZ_KK316851.1 Protein Homology CDS 307019 308137 . - 0 ID=cds-WP_003412001.1;Parent=gene-AL60_RS17230;Dbxref=GenBank:WP_003412001.1;Name=WP_003412001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216853.1;locus_tag=AL60_RS17230;product=nitroreductase family protein;protein_id=WP_003412001.1;transl_table=11 NZ_KK316851.1 RefSeq gene 308257 309213 . - . ID=gene-AL60_RS17235;Name=moeW;gbkey=Gene;gene=moeW;gene_biotype=protein_coding;locus_tag=AL60_RS17235;old_locus_tag=AL60_02379 NZ_KK316851.1 Protein Homology CDS 308257 309213 . - 0 ID=cds-WP_003412005.1;Parent=gene-AL60_RS17235;Dbxref=GenBank:WP_003412005.1;Name=WP_003412005.1;gbkey=CDS;gene=moeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216854.1;locus_tag=AL60_RS17235;product=ThiF family adenylyltransferase;protein_id=WP_003412005.1;transl_table=11 NZ_KK316851.1 RefSeq gene 309843 312731 . + . ID=gene-AL60_RS17240;Name=mmpL9;gbkey=Gene;gene=mmpL9;gene_biotype=protein_coding;locus_tag=AL60_RS17240;old_locus_tag=AL60_02380 NZ_KK316851.1 Protein Homology CDS 309843 312731 . + 0 ID=cds-WP_003899278.1;Parent=gene-AL60_RS17240;Dbxref=GenBank:WP_003899278.1;Name=WP_003899278.1;gbkey=CDS;gene=mmpL9;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216855.1;locus_tag=AL60_RS17240;product=RND transporter MmpL9;protein_id=WP_003899278.1;transl_table=11 NZ_KK316851.1 RefSeq pseudogene 312679 312787 . + . ID=gene-AL60_RS26875;Name=AL60_RS26875;end_range=312787,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26875;partial=true;pseudo=true;start_range=.,312679 NZ_KK316851.1 Protein Homology CDS 312679 312787 . + 0 ID=cds-AL60_RS26875;Parent=gene-AL60_RS26875;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=312787,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216851.1;locus_tag=AL60_RS26875;partial=true;product=serine O-acetyltransferase;pseudo=true;start_range=.,312679;transl_table=11 NZ_KK316851.1 RefSeq gene 312817 314058 . - . ID=gene-AL60_RS17245;Name=AL60_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17245;old_locus_tag=AL60_02381 NZ_KK316851.1 Protein Homology CDS 312817 314058 . - 0 ID=cds-WP_003412039.1;Parent=gene-AL60_RS17245;Dbxref=GenBank:WP_003412039.1;Name=WP_003412039.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177869.1;locus_tag=AL60_RS17245;product=PE family protein;protein_id=WP_003412039.1;transl_table=11 NZ_KK316851.1 RefSeq gene 314557 314629 . - . ID=gene-AL60_RS17250;Name=AL60_RS17250;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS17250;old_locus_tag=AL60_02382 NZ_KK316851.1 tRNAscan-SE tRNA 314557 314629 . - . ID=rna-AL60_RS17250;Parent=gene-AL60_RS17250;anticodon=(pos:complement(314594..314596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS17250;product=tRNA-Asn NZ_KK316851.1 tRNAscan-SE exon 314557 314629 . - . ID=exon-AL60_RS17250-1;Parent=rna-AL60_RS17250;anticodon=(pos:complement(314594..314596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS17250;product=tRNA-Asn NZ_KK316851.1 RefSeq gene 314747 315166 . + . ID=gene-AL60_RS17255;Name=AL60_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17255;old_locus_tag=AL60_02383 NZ_KK316851.1 Protein Homology CDS 314747 315166 . + 0 ID=cds-WP_003412042.1;Parent=gene-AL60_RS17255;Dbxref=GenBank:WP_003412042.1;Name=WP_003412042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216857.1;locus_tag=AL60_RS17255;product=hypothetical protein;protein_id=WP_003412042.1;transl_table=11 NZ_KK316851.1 RefSeq gene 315422 315679 . + . ID=gene-AL60_RS17260;Name=AL60_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17260;old_locus_tag=AL60_02384 NZ_KK316851.1 Protein Homology CDS 315422 315679 . + 0 ID=cds-WP_003412045.1;Parent=gene-AL60_RS17260;Dbxref=GenBank:WP_003412045.1;Name=WP_003412045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216858.1;locus_tag=AL60_RS17260;product=hypothetical protein;protein_id=WP_003412045.1;transl_table=11 NZ_KK316851.1 RefSeq gene 315683 317602 . - . ID=gene-AL60_RS17265;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AL60_RS17265;old_locus_tag=AL60_02385 NZ_KK316851.1 Protein Homology CDS 315683 317602 . - 0 ID=cds-WP_003412049.1;Parent=gene-AL60_RS17265;Dbxref=GenBank:WP_003412049.1;Name=WP_003412049.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216859.1;locus_tag=AL60_RS17265;product=DNA primase;protein_id=WP_003412049.1;transl_table=11 NZ_KK316851.1 RefSeq gene 317607 318902 . - . ID=gene-AL60_RS17270;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AL60_RS17270;old_locus_tag=AL60_02386 NZ_KK316851.1 Protein Homology CDS 317607 318902 . - 0 ID=cds-WP_003899281.1;Parent=gene-AL60_RS17270;Dbxref=GenBank:WP_003899281.1;Name=WP_003899281.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832,GO:0016793;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA,triphosphoric monoester hydrolase activity|0016793||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216860.1;locus_tag=AL60_RS17270;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_003899281.1;transl_table=11 NZ_KK316851.1 RefSeq gene 318971 320953 . + . ID=gene-AL60_RS17275;Name=AL60_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17275;old_locus_tag=AL60_02387 NZ_KK316851.1 Protein Homology CDS 318971 320953 . + 0 ID=cds-WP_003899282.1;Parent=gene-AL60_RS17275;Dbxref=GenBank:WP_003899282.1;Name=WP_003899282.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216861.1;locus_tag=AL60_RS17275;product=TPM domain-containing protein;protein_id=WP_003899282.1;transl_table=11 NZ_KK316851.1 RefSeq gene 321038 321322 . - . ID=gene-AL60_RS17280;Name=esxO;gbkey=Gene;gene=esxO;gene_biotype=protein_coding;locus_tag=AL60_RS17280;old_locus_tag=AL60_02388 NZ_KK316851.1 Protein Homology CDS 321038 321322 . - 0 ID=cds-WP_003899283.1;Parent=gene-AL60_RS17280;Dbxref=GenBank:WP_003899283.1;Name=WP_003899283.1;gbkey=CDS;gene=esxO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216862.1;locus_tag=AL60_RS17280;product=type VII secretion system effector EsxO;protein_id=WP_003899283.1;transl_table=11 NZ_KK316851.1 RefSeq gene 321373 321669 . - . ID=gene-AL60_RS17285;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=protein_coding;locus_tag=AL60_RS17285;old_locus_tag=AL60_02389 NZ_KK316851.1 Protein Homology CDS 321373 321669 . - 0 ID=cds-WP_003900502.1;Parent=gene-AL60_RS17285;Dbxref=GenBank:WP_003900502.1;Name=WP_003900502.1;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216863.1;locus_tag=AL60_RS17285;product=type VII secretion system ESX-5 protein EsxJ;protein_id=WP_003900502.1;transl_table=11 NZ_KK316851.1 RefSeq gene 321804 322130 . - . ID=gene-AL60_RS0104925;Name=AL60_RS0104925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104925;old_locus_tag=AL60_02390 NZ_KK316851.1 Protein Homology CDS 321804 322130 . - 0 ID=cds-WP_003412119.1;Parent=gene-AL60_RS0104925;Dbxref=GenBank:WP_003412119.1;Name=WP_003412119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216864.1;locus_tag=AL60_RS0104925;product=hypothetical protein;protein_id=WP_003412119.1;transl_table=11 NZ_KK316851.1 RefSeq gene 322322 323848 . - . ID=gene-AL60_RS17290;Name=plcC;gbkey=Gene;gene=plcC;gene_biotype=protein_coding;locus_tag=AL60_RS17290;old_locus_tag=AL60_02391 NZ_KK316851.1 Protein Homology CDS 322322 323848 . - 0 ID=cds-WP_003899284.1;Parent=gene-AL60_RS17290;Dbxref=GenBank:WP_003899284.1;Name=WP_003899284.1;gbkey=CDS;gene=plcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216865.1;locus_tag=AL60_RS17290;product=phospholipase C;protein_id=WP_003899284.1;transl_table=11 NZ_KK316851.1 RefSeq gene 323931 325469 . - . ID=gene-AL60_RS17295;Name=plcB;gbkey=Gene;gene=plcB;gene_biotype=protein_coding;locus_tag=AL60_RS17295;old_locus_tag=AL60_02392 NZ_KK316851.1 Protein Homology CDS 323931 325469 . - 0 ID=cds-WP_003899285.1;Parent=gene-AL60_RS17295;Dbxref=GenBank:WP_003899285.1;Name=WP_003899285.1;gbkey=CDS;gene=plcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216865.1;locus_tag=AL60_RS17295;product=phospholipase C;protein_id=WP_003899285.1;transl_table=11 NZ_KK316851.1 RefSeq gene 325687 327225 . - . ID=gene-AL60_RS17300;Name=plcA;gbkey=Gene;gene=plcA;gene_biotype=protein_coding;locus_tag=AL60_RS17300;old_locus_tag=AL60_02393 NZ_KK316851.1 Protein Homology CDS 325687 327225 . - 0 ID=cds-WP_003904825.1;Parent=gene-AL60_RS17300;Dbxref=GenBank:WP_003904825.1;Name=WP_003904825.1;gbkey=CDS;gene=plcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911847.1;locus_tag=AL60_RS17300;product=phospholipase C;protein_id=WP_003904825.1;transl_table=11 NZ_KK316851.1 RefSeq gene 327805 327942 . + . ID=gene-AL60_RS27170;Name=AL60_RS27170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27170 NZ_KK316851.1 GeneMarkS-2+ CDS 327805 327942 . + 0 ID=cds-WP_021083104.1;Parent=gene-AL60_RS27170;Dbxref=GenBank:WP_021083104.1;Name=WP_021083104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS27170;product=hypothetical protein;protein_id=WP_021083104.1;transl_table=11 NZ_KK316851.1 RefSeq gene 328073 329248 . - . ID=gene-AL60_RS17305;Name=AL60_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17305;old_locus_tag=AL60_02394 NZ_KK316851.1 Protein Homology CDS 328073 329248 . - 0 ID=cds-WP_003900505.1;Parent=gene-AL60_RS17305;Dbxref=GenBank:WP_003900505.1;Name=WP_003900505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177870.1;locus_tag=AL60_RS17305;product=PPE family protein;protein_id=WP_003900505.1;transl_table=11 NZ_KK316851.1 RefSeq gene 329678 330750 . - . ID=gene-AL60_RS17310;Name=AL60_RS17310;end_range=330750,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17310;old_locus_tag=AL60_02395;partial=true NZ_KK316851.1 Protein Homology CDS 329678 330750 . - 2 ID=cds-WP_031647447.1;Parent=gene-AL60_RS17310;Dbxref=GenBank:WP_031647447.1;Name=WP_031647447.1;Ontology_term=GO:0046903,GO:0015474,GO:0016020;end_range=330750,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;go_process=secretion|0046903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015290607.1;locus_tag=AL60_RS17310;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_031647447.1;transl_table=11 ##sequence-region NZ_KK316852.1 1 315796 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316852.1 RefSeq region 1 315796 . + . ID=NZ_KK316852.1:1..315796;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316852.1 RefSeq gene 1 980 . - . ID=gene-AL60_RS17320;Name=AL60_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17320;old_locus_tag=AL60_02396;partial=true;start_range=.,1 NZ_KK316852.1 Protein Homology CDS 1 980 . - 0 ID=cds-WP_049951444.1;Parent=gene-AL60_RS17320;Dbxref=GenBank:WP_049951444.1;Name=WP_049951444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216531.1;locus_tag=AL60_RS17320;partial=true;product=13E12 repeat family protein;protein_id=WP_049951444.1;start_range=.,1;transl_table=11 NZ_KK316852.1 RefSeq gene 1607 1846 . - . ID=gene-AL60_RS27950;Name=AL60_RS27950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27950;old_locus_tag=AL60_02397 NZ_KK316852.1 Protein Homology CDS 1607 1846 . - 0 ID=cds-WP_077365248.1;Parent=gene-AL60_RS27950;Dbxref=GenBank:WP_077365248.1;Name=WP_077365248.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.6;locus_tag=AL60_RS27950;product=DDE-type integrase/transposase/recombinase;protein_id=WP_077365248.1;transl_table=11 NZ_KK316852.1 RefSeq gene 1880 1999 . - . ID=gene-AL60_RS27955;Name=AL60_RS27955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27955 NZ_KK316852.1 Protein Homology CDS 1880 1999 . - 0 ID=cds-WP_021083427.1;Parent=gene-AL60_RS27955;Dbxref=GenBank:WP_021083427.1;Name=WP_021083427.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024673.6;locus_tag=AL60_RS27955;product=hypothetical protein;protein_id=WP_021083427.1;transl_table=11 NZ_KK316852.1 RefSeq gene 2202 2471 . + . ID=gene-AL60_RS17330;Name=AL60_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17330;old_locus_tag=AL60_02398 NZ_KK316852.1 Protein Homology CDS 2202 2471 . + 0 ID=cds-WP_003899012.1;Parent=gene-AL60_RS17330;Dbxref=GenBank:WP_003899012.1;Name=WP_003899012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216282.2;locus_tag=AL60_RS17330;product=metal-sensitive transcriptional regulator;protein_id=WP_003899012.1;transl_table=11 NZ_KK316852.1 RefSeq gene 2539 2898 . + . ID=gene-AL60_RS17335;Name=AL60_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17335;old_locus_tag=AL60_02399 NZ_KK316852.1 Protein Homology CDS 2539 2898 . + 0 ID=cds-WP_003408743.1;Parent=gene-AL60_RS17335;Dbxref=GenBank:WP_003408743.1;Name=WP_003408743.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216283.1;locus_tag=AL60_RS17335;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003408743.1;transl_table=11 NZ_KK316852.1 RefSeq gene 3079 4935 . + . ID=gene-AL60_RS17340;Name=AL60_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17340;old_locus_tag=AL60_02400 NZ_KK316852.1 Protein Homology CDS 3079 4935 . + 0 ID=cds-WP_003905649.1;Parent=gene-AL60_RS17340;Dbxref=GenBank:WP_003905649.1;Name=WP_003905649.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177832.1;locus_tag=AL60_RS17340;product=PE family protein;protein_id=WP_003905649.1;transl_table=11 NZ_KK316852.1 RefSeq gene 5091 6335 . + . ID=gene-AL60_RS17345;Name=AL60_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17345;old_locus_tag=AL60_02401 NZ_KK316852.1 Protein Homology CDS 5091 6335 . + 0 ID=cds-WP_003904700.1;Parent=gene-AL60_RS17345;Dbxref=GenBank:WP_003904700.1;Name=WP_003904700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216285.1;locus_tag=AL60_RS17345;product=amino acid deaminase/aldolase;protein_id=WP_003904700.1;transl_table=11 NZ_KK316852.1 RefSeq gene 6424 7629 . + . ID=gene-AL60_RS17350;Name=AL60_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17350;old_locus_tag=AL60_02402 NZ_KK316852.1 Protein Homology CDS 6424 7629 . + 0 ID=cds-WP_003911655.1;Parent=gene-AL60_RS17350;Dbxref=GenBank:WP_003911655.1;Name=WP_003911655.1;Ontology_term=GO:0006508,GO:0008235,GO:0008237,GO:0008270;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911655.1;locus_tag=AL60_RS17350;product=M28 family metallopeptidase;protein_id=WP_003911655.1;transl_table=11 NZ_KK316852.1 RefSeq gene 7626 8912 . + . ID=gene-AL60_RS17355;Name=AL60_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17355;old_locus_tag=AL60_02403 NZ_KK316852.1 Protein Homology CDS 7626 8912 . + 0 ID=cds-WP_003408749.1;Parent=gene-AL60_RS17355;Dbxref=GenBank:WP_003408749.1;Name=WP_003408749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216287.1;locus_tag=AL60_RS17355;product=L-gulono-1%2C4-lactone dehydrogenase;protein_id=WP_003408749.1;transl_table=11 NZ_KK316852.1 RefSeq gene 9101 9412 . + . ID=gene-AL60_RS17360;Name=AL60_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17360;old_locus_tag=AL60_02404 NZ_KK316852.1 Protein Homology CDS 9101 9412 . + 0 ID=cds-WP_003408753.1;Parent=gene-AL60_RS17360;Dbxref=GenBank:WP_003408753.1;Name=WP_003408753.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216288.1;locus_tag=AL60_RS17360;product=ANTAR domain-containing protein;protein_id=WP_003408753.1;transl_table=11 NZ_KK316852.1 RefSeq gene 9485 10231 . - . ID=gene-AL60_RS17365;Name=AL60_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17365;old_locus_tag=AL60_02405 NZ_KK316852.1 Protein Homology CDS 9485 10231 . - 0 ID=cds-WP_003408754.1;Parent=gene-AL60_RS17365;Dbxref=GenBank:WP_003408754.1;Name=WP_003408754.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216289.1;locus_tag=AL60_RS17365;product=IclR family transcriptional regulator;protein_id=WP_003408754.1;transl_table=11 NZ_KK316852.1 RefSeq gene 10297 11637 . + . ID=gene-AL60_RS17370;Name=AL60_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17370;old_locus_tag=AL60_02406 NZ_KK316852.1 Protein Homology CDS 10297 11637 . + 0 ID=cds-WP_003899017.1;Parent=gene-AL60_RS17370;Dbxref=GenBank:WP_003899017.1;Name=WP_003899017.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216290.1;locus_tag=AL60_RS17370;product=FAD-binding oxidoreductase;protein_id=WP_003899017.1;transl_table=11 NZ_KK316852.1 RefSeq gene 11637 12455 . + . ID=gene-AL60_RS17375;Name=AL60_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17375;old_locus_tag=AL60_02407 NZ_KK316852.1 Protein Homology CDS 11637 12455 . + 0 ID=cds-WP_003408760.1;Parent=gene-AL60_RS17375;Dbxref=GenBank:WP_003408760.1;Name=WP_003408760.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216291.1;locus_tag=AL60_RS17375;product=DAPG hydrolase family protein;protein_id=WP_003408760.1;transl_table=11 NZ_KK316852.1 RefSeq gene 12460 13020 . - . ID=gene-AL60_RS17380;Name=AL60_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17380;old_locus_tag=AL60_02408 NZ_KK316852.1 Protein Homology CDS 12460 13020 . - 0 ID=cds-WP_003899018.1;Parent=gene-AL60_RS17380;Dbxref=GenBank:WP_003899018.1;Name=WP_003899018.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216292.1;locus_tag=AL60_RS17380;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899018.1;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 13211 13390 . + . ID=gene-AL60_RS0104950;Name=AL60_RS0104950;end_range=13390,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0104950;partial=true;pseudo=true NZ_KK316852.1 Protein Homology CDS 13211 13390 . + 0 ID=cds-AL60_RS0104950;Parent=gene-AL60_RS0104950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=13390,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911660.1;locus_tag=AL60_RS0104950;partial=true;product=cytochrome P450;pseudo=true;transl_table=11 NZ_KK316852.1 RefSeq gene 13432 13651 . - . ID=gene-AL60_RS17385;Name=AL60_RS17385;end_range=13651,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17385;old_locus_tag=AL60_02409;partial=true NZ_KK316852.1 Protein Homology CDS 13432 13651 . - 1 ID=cds-WP_031654873.1;Parent=gene-AL60_RS17385;Dbxref=GenBank:WP_031654873.1;Name=WP_031654873.1;Ontology_term=GO:0015074;end_range=13651,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS17385;partial=true;product=integrase core domain-containing protein;protein_id=WP_031654873.1;transl_table=11 NZ_KK316852.1 RefSeq gene 14776 15015 . - . ID=gene-AL60_RS17390;Name=AL60_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17390;old_locus_tag=AL60_02410;partial=true;start_range=.,14776 NZ_KK316852.1 Protein Homology CDS 14776 15015 . - 0 ID=cds-WP_031582523.1;Parent=gene-AL60_RS17390;Dbxref=GenBank:WP_031582523.1;Name=WP_031582523.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS17390;partial=true;product=transposase;protein_id=WP_031582523.1;start_range=.,14776;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 15068 16105 . + . ID=gene-AL60_RS17395;Name=cyp144;gbkey=Gene;gene=cyp144;gene_biotype=pseudogene;locus_tag=AL60_RS17395;old_locus_tag=AL60_02411;partial=true;pseudo=true;start_range=.,15068 NZ_KK316852.1 Protein Homology CDS 15068 16105 . + 0 ID=cds-AL60_RS17395;Parent=gene-AL60_RS17395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=cyp144;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911660.1;locus_tag=AL60_RS17395;partial=true;product=cytochrome P450 Cyp144;pseudo=true;start_range=.,15068;transl_table=11 NZ_KK316852.1 RefSeq gene 16226 16675 . - . ID=gene-AL60_RS17400;Name=AL60_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17400;old_locus_tag=AL60_02412 NZ_KK316852.1 Protein Homology CDS 16226 16675 . - 0 ID=cds-WP_003408775.1;Parent=gene-AL60_RS17400;Dbxref=GenBank:WP_003408775.1;Name=WP_003408775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216294.1;locus_tag=AL60_RS17400;product=DUF6941 family protein;protein_id=WP_003408775.1;transl_table=11 NZ_KK316852.1 RefSeq gene 16831 18624 . - . ID=gene-AL60_RS17405;Name=AL60_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17405;old_locus_tag=AL60_02413 NZ_KK316852.1 Protein Homology CDS 16831 18624 . - 0 ID=cds-WP_003408781.1;Parent=gene-AL60_RS17405;Dbxref=GenBank:WP_003408781.1;Name=WP_003408781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216295.1;locus_tag=AL60_RS17405;product=DUF4407 domain-containing protein;protein_id=WP_003408781.1;transl_table=11 NZ_KK316852.1 RefSeq gene 18844 19407 . + . ID=gene-AL60_RS17410;Name=AL60_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17410;old_locus_tag=AL60_02414 NZ_KK316852.1 Protein Homology CDS 18844 19407 . + 0 ID=cds-WP_003408792.1;Parent=gene-AL60_RS17410;Dbxref=GenBank:WP_003408792.1;Name=WP_003408792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216296.1;locus_tag=AL60_RS17410;product=hypothetical protein;protein_id=WP_003408792.1;transl_table=11 NZ_KK316852.1 RefSeq gene 19447 21621 . - . ID=gene-AL60_RS17415;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=AL60_RS17415;old_locus_tag=AL60_02415 NZ_KK316852.1 Protein Homology CDS 19447 21621 . - 0 ID=cds-WP_003408795.1;Parent=gene-AL60_RS17415;Dbxref=GenBank:WP_003408795.1;Name=WP_003408795.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216297.1;locus_tag=AL60_RS17415;product=4-alpha-glucanotransferase;protein_id=WP_003408795.1;transl_table=11 NZ_KK316852.1 RefSeq gene 21885 23405 . + . ID=gene-AL60_RS17420;Name=eccB5;gbkey=Gene;gene=eccB5;gene_biotype=protein_coding;locus_tag=AL60_RS17420;old_locus_tag=AL60_02416 NZ_KK316852.1 Protein Homology CDS 21885 23405 . + 0 ID=cds-WP_003899021.1;Parent=gene-AL60_RS17420;Dbxref=GenBank:WP_003899021.1;Name=WP_003899021.1;gbkey=CDS;gene=eccB5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216298.1;locus_tag=AL60_RS17420;product=type VII secretion system ESX-5 subunit EccB5;protein_id=WP_003899021.1;transl_table=11 NZ_KK316852.1 RefSeq gene 23402 27577 . + . ID=gene-AL60_RS17425;Name=eccC5;gbkey=Gene;gene=eccC5;gene_biotype=protein_coding;locus_tag=AL60_RS17425;old_locus_tag=AL60_02417 NZ_KK316852.1 Protein Homology CDS 23402 27577 . + 0 ID=cds-WP_003408799.1;Parent=gene-AL60_RS17425;Dbxref=GenBank:WP_003408799.1;Name=WP_003408799.1;gbkey=CDS;gene=eccC5;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410461.1;locus_tag=AL60_RS17425;product=type VII secretion system ESX-5 FtsK/SpoIIIE family ATPase EccC5;protein_id=WP_003408799.1;transl_table=11 NZ_KK316852.1 RefSeq gene 27592 28773 . - . ID=gene-AL60_RS17430;Name=AL60_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17430;old_locus_tag=AL60_02418 NZ_KK316852.1 Protein Homology CDS 27592 28773 . - 0 ID=cds-WP_003408802.1;Parent=gene-AL60_RS17430;Dbxref=GenBank:WP_003408802.1;Name=WP_003408802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216301.1;locus_tag=AL60_RS17430;product=cytochrome P450;protein_id=WP_003408802.1;transl_table=11 NZ_KK316852.1 RefSeq gene 28973 29176 . + . ID=gene-AL60_RS17435;Name=AL60_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17435;old_locus_tag=AL60_02419 NZ_KK316852.1 Protein Homology CDS 28973 29176 . + 0 ID=cds-WP_003408803.1;Parent=gene-AL60_RS17435;Dbxref=GenBank:WP_003408803.1;Name=WP_003408803.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216302.1;locus_tag=AL60_RS17435;product=ferredoxin;protein_id=WP_003408803.1;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 29446 29754 . + . ID=gene-AL60_RS0104960;Name=AL60_RS0104960;end_range=29754,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0104960;partial=true;pseudo=true NZ_KK316852.1 Protein Homology CDS 29446 29754 . + 0 ID=cds-AL60_RS0104960;Parent=gene-AL60_RS0104960;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=29754,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177836.1;locus_tag=AL60_RS0104960;partial=true;product=type VII secretion system ESX-5 target PPE25;pseudo=true;transl_table=11 NZ_KK316852.1 RefSeq gene 30384 30943 . + . ID=gene-AL60_RS17440;Name=AL60_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17440;old_locus_tag=AL60_02420;partial=true;start_range=.,30384 NZ_KK316852.1 Protein Homology CDS 30384 30943 . + 2 ID=cds-WP_031721510.1;Parent=gene-AL60_RS17440;Dbxref=GenBank:WP_031721510.1;Name=WP_031721510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177833.1;locus_tag=AL60_RS17440;partial=true;product=PE/PPE C-terminal domain-containing protein;protein_id=WP_031721510.1;start_range=.,30384;transl_table=11 NZ_KK316852.1 RefSeq gene 31022 31321 . + . ID=gene-AL60_RS17445;Name=AL60_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17445;old_locus_tag=AL60_02421 NZ_KK316852.1 Protein Homology CDS 31022 31321 . + 0 ID=cds-WP_003408976.1;Parent=gene-AL60_RS17445;Dbxref=GenBank:WP_003408976.1;Name=WP_003408976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177834.1;locus_tag=AL60_RS17445;product=type VII secretion system ESX-5 target PE18;protein_id=WP_003408976.1;transl_table=11 NZ_KK316852.1 RefSeq gene 31335 32516 . + . ID=gene-AL60_RS17450;Name=AL60_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17450;old_locus_tag=AL60_02422 NZ_KK316852.1 Protein Homology CDS 31335 32516 . + 0 ID=cds-WP_003408979.1;Parent=gene-AL60_RS17450;Dbxref=GenBank:WP_003408979.1;Name=WP_003408979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177835.1;locus_tag=AL60_RS17450;product=type VII secretion system ESX-5 target PPE26;protein_id=WP_003408979.1;transl_table=11 NZ_KK316852.1 RefSeq gene 32970 34022 . + . ID=gene-AL60_RS17455;Name=AL60_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17455;old_locus_tag=AL60_02423 NZ_KK316852.1 Protein Homology CDS 32970 34022 . + 0 ID=cds-WP_003408805.1;Parent=gene-AL60_RS17455;Dbxref=GenBank:WP_003408805.1;Name=WP_003408805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177836.1;locus_tag=AL60_RS17455;product=type VII secretion system ESX-5 target PPE27;protein_id=WP_003408805.1;transl_table=11 NZ_KK316852.1 RefSeq gene 34449 34748 . + . ID=gene-AL60_RS17460;Name=AL60_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17460;old_locus_tag=AL60_02424 NZ_KK316852.1 Protein Homology CDS 34449 34748 . + 0 ID=cds-WP_003408807.1;Parent=gene-AL60_RS17460;Dbxref=GenBank:WP_003408807.1;Name=WP_003408807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177837.1;locus_tag=AL60_RS17460;product=type VII secretion system ESX-5 target PE19;protein_id=WP_003408807.1;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 34891 35187 . + . ID=gene-AL60_RS26090;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=pseudogene;locus_tag=AL60_RS26090;pseudo=true NZ_KK316852.1 Protein Homology CDS 34891 35187 . + 0 ID=cds-AL60_RS26090;Parent=gene-AL60_RS26090;Note=internal stop;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215554.1;locus_tag=AL60_RS26090;product=type VII secretion system ESX-5 protein EsxJ;pseudo=true;transl_table=11 NZ_KK316852.1 RefSeq gene 35238 35522 . + . ID=gene-AL60_RS17470;Name=esxN;gbkey=Gene;gene=esxN;gene_biotype=protein_coding;locus_tag=AL60_RS17470;old_locus_tag=AL60_02427 NZ_KK316852.1 Protein Homology CDS 35238 35522 . + 0 ID=cds-WP_003408840.1;Parent=gene-AL60_RS17470;Dbxref=GenBank:WP_003408840.1;Name=WP_003408840.1;gbkey=CDS;gene=esxN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177838.1;locus_tag=AL60_RS17470;product=effector;protein_id=WP_003408840.1;transl_table=11 NZ_KK316852.1 RefSeq gene 35610 36512 . + . ID=gene-AL60_RS17475;Name=AL60_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17475;old_locus_tag=AL60_02428 NZ_KK316852.1 Protein Homology CDS 35610 36512 . + 0 ID=cds-WP_003408846.1;Parent=gene-AL60_RS17475;Dbxref=GenBank:WP_003408846.1;Name=WP_003408846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216310.1;locus_tag=AL60_RS17475;product=ESX secretion-associated protein EspG;protein_id=WP_003408846.1;transl_table=11 NZ_KK316852.1 RefSeq gene 36784 38295 . + . ID=gene-AL60_RS17480;Name=eccD5;gbkey=Gene;gene=eccD5;gene_biotype=protein_coding;locus_tag=AL60_RS17480;old_locus_tag=AL60_02429 NZ_KK316852.1 Protein Homology CDS 36784 38295 . + 0 ID=cds-WP_003900411.1;Parent=gene-AL60_RS17480;Dbxref=GenBank:WP_003900411.1;Name=WP_003900411.1;gbkey=CDS;gene=eccD5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216311.1;locus_tag=AL60_RS17480;product=type VII secretion system ESX-5 subunit EccD5;protein_id=WP_003900411.1;transl_table=11 NZ_KK316852.1 RefSeq gene 38273 40030 . + . ID=gene-AL60_RS17485;Name=mycP5;gbkey=Gene;gene=mycP5;gene_biotype=protein_coding;locus_tag=AL60_RS17485;old_locus_tag=AL60_02430 NZ_KK316852.1 Protein Homology CDS 38273 40030 . + 0 ID=cds-WP_012054295.1;Parent=gene-AL60_RS17485;Dbxref=GenBank:WP_012054295.1;Name=WP_012054295.1;gbkey=CDS;gene=mycP5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216312.1;locus_tag=AL60_RS17485;product=type VII secretion system ESX-5 serine protease mycosin MycP5;protein_id=WP_012054295.1;transl_table=11 NZ_KK316852.1 RefSeq gene 40027 41247 . + . ID=gene-AL60_RS17490;Name=eccE5;gbkey=Gene;gene=eccE5;gene_biotype=protein_coding;locus_tag=AL60_RS17490;old_locus_tag=AL60_02431 NZ_KK316852.1 Protein Homology CDS 40027 41247 . + 0 ID=cds-WP_003408859.1;Parent=gene-AL60_RS17490;Dbxref=GenBank:WP_003408859.1;Name=WP_003408859.1;gbkey=CDS;gene=eccE5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216313.1;locus_tag=AL60_RS17490;product=type VII secretion system ESX-5 subunit EccE5;protein_id=WP_003408859.1;transl_table=11 NZ_KK316852.1 RefSeq gene 41244 43076 . + . ID=gene-AL60_RS17495;Name=eccA5;gbkey=Gene;gene=eccA5;gene_biotype=protein_coding;locus_tag=AL60_RS17495;old_locus_tag=AL60_02432 NZ_KK316852.1 Protein Homology CDS 41244 43076 . + 0 ID=cds-WP_003408868.1;Parent=gene-AL60_RS17495;Dbxref=GenBank:WP_003408868.1;Name=WP_003408868.1;gbkey=CDS;gene=eccA5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216314.1;locus_tag=AL60_RS17495;product=type VII secretion system ESX-5 AAA family ATPase EccA5;protein_id=WP_003408868.1;transl_table=11 NZ_KK316852.1 RefSeq gene 43703 43894 . + . ID=gene-AL60_RS17500;Name=AL60_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17500;old_locus_tag=AL60_02433 NZ_KK316852.1 Protein Homology CDS 43703 43894 . + 0 ID=cds-WP_003899024.1;Parent=gene-AL60_RS17500;Dbxref=GenBank:WP_003899024.1;Name=WP_003899024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216315.1;locus_tag=AL60_RS17500;product=hypothetical protein;protein_id=WP_003899024.1;transl_table=11 NZ_KK316852.1 RefSeq gene 43997 45964 . + . ID=gene-AL60_RS17505;Name=AL60_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17505;old_locus_tag=AL60_02434 NZ_KK316852.1 Protein Homology CDS 43997 45964 . + 0 ID=cds-WP_003901256.1;Parent=gene-AL60_RS17505;Dbxref=GenBank:WP_003901256.1;Name=WP_003901256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177839.1;locus_tag=AL60_RS17505;product=PPE family protein;protein_id=WP_003901256.1;transl_table=11 NZ_KK316852.1 RefSeq gene 46545 47816 . + . ID=gene-AL60_RS17510;Name=AL60_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17510;old_locus_tag=AL60_02435 NZ_KK316852.1 Protein Homology CDS 46545 47816 . + 0 ID=cds-WP_003899026.1;Parent=gene-AL60_RS17510;Dbxref=GenBank:WP_003899026.1;Name=WP_003899026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177840.1;locus_tag=AL60_RS17510;product=PPE family protein;protein_id=WP_003899026.1;transl_table=11 NZ_KK316852.1 RefSeq gene 47928 49319 . + . ID=gene-AL60_RS17515;Name=AL60_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17515;old_locus_tag=AL60_02436 NZ_KK316852.1 Protein Homology CDS 47928 49319 . + 0 ID=cds-WP_003409061.1;Parent=gene-AL60_RS17515;Dbxref=GenBank:WP_003409061.1;Name=WP_003409061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177841.1;locus_tag=AL60_RS17515;product=PPE family protein;protein_id=WP_003409061.1;transl_table=11 NZ_KK316852.1 RefSeq gene 49467 51386 . - . ID=gene-AL60_RS17520;Name=AL60_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17520;old_locus_tag=AL60_02437 NZ_KK316852.1 Protein Homology CDS 49467 51386 . - 0 ID=cds-WP_003910446.1;Parent=gene-AL60_RS17520;Dbxref=GenBank:WP_003910446.1;Name=WP_003910446.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177842.1;locus_tag=AL60_RS17520;product=PE family protein;protein_id=WP_003910446.1;transl_table=11 NZ_KK316852.1 RefSeq gene 51567 51893 . - . ID=gene-AL60_RS17525;Name=AL60_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17525;old_locus_tag=AL60_02438 NZ_KK316852.1 Protein Homology CDS 51567 51893 . - 0 ID=cds-WP_003409065.1;Parent=gene-AL60_RS17525;Dbxref=GenBank:WP_003409065.1;Name=WP_003409065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216320.1;locus_tag=AL60_RS17525;product=DUF732 domain-containing protein;protein_id=WP_003409065.1;transl_table=11 NZ_KK316852.1 cmsearch riboswitch 52139 52313 . + . ID=id-NZ_KK316852.1:52139..52313;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316852.1 RefSeq gene 52616 52915 . + . ID=gene-AL60_RS17535;Name=AL60_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17535;old_locus_tag=AL60_02440 NZ_KK316852.1 Protein Homology CDS 52616 52915 . + 0 ID=cds-WP_003900412.1;Parent=gene-AL60_RS17535;Dbxref=GenBank:WP_003900412.1;Name=WP_003900412.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177843.1;locus_tag=AL60_RS17535;product=PE family protein;protein_id=WP_003900412.1;transl_table=11 NZ_KK316852.1 RefSeq gene 52930 54141 . + . ID=gene-AL60_RS17540;Name=AL60_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17540;old_locus_tag=AL60_02441 NZ_KK316852.1 Protein Homology CDS 52930 54141 . + 0 ID=cds-WP_003409179.1;Parent=gene-AL60_RS17540;Dbxref=GenBank:WP_003409179.1;Name=WP_003409179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916893.1;locus_tag=AL60_RS17540;product=PPE family protein;protein_id=WP_003409179.1;transl_table=11 NZ_KK316852.1 RefSeq gene 54465 55694 . + . ID=gene-AL60_RS17545;Name=AL60_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17545;old_locus_tag=AL60_02442 NZ_KK316852.1 Protein Homology CDS 54465 55694 . + 0 ID=cds-WP_003906680.1;Parent=gene-AL60_RS17545;Dbxref=GenBank:WP_003906680.1;Name=WP_003906680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177844.1;locus_tag=AL60_RS17545;product=PPE family protein;protein_id=WP_003906680.1;transl_table=11 NZ_KK316852.1 RefSeq gene 55826 57232 . + . ID=gene-AL60_RS17550;Name=AL60_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17550;old_locus_tag=AL60_02443 NZ_KK316852.1 Protein Homology CDS 55826 57232 . + 0 ID=cds-WP_003899030.1;Parent=gene-AL60_RS17550;Dbxref=GenBank:WP_003899030.1;Name=WP_003899030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177845.1;locus_tag=AL60_RS17550;product=PPE family protein;protein_id=WP_003899030.1;transl_table=11 NZ_KK316852.1 RefSeq gene 57513 57833 . + . ID=gene-AL60_RS17555;Name=AL60_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17555;old_locus_tag=AL60_02444 NZ_KK316852.1 Protein Homology CDS 57513 57833 . + 0 ID=cds-WP_015288168.1;Parent=gene-AL60_RS17555;Dbxref=GenBank:WP_015288168.1;Name=WP_015288168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288168.1;locus_tag=AL60_RS17555;product=DUF732 domain-containing protein;protein_id=WP_015288168.1;transl_table=11 NZ_KK316852.1 RefSeq gene 57987 58691 . + . ID=gene-AL60_RS17560;Name=mgtC;gbkey=Gene;gene=mgtC;gene_biotype=protein_coding;locus_tag=AL60_RS17560;old_locus_tag=AL60_02445 NZ_KK316852.1 Protein Homology CDS 57987 58691 . + 0 ID=cds-WP_003899032.1;Parent=gene-AL60_RS17560;Dbxref=GenBank:WP_003899032.1;Name=WP_003899032.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mgtC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216327.1;locus_tag=AL60_RS17560;product=MgtC/SapB family protein;protein_id=WP_003899032.1;transl_table=11 NZ_KK316852.1 RefSeq gene 58701 59903 . - . ID=gene-AL60_RS17565;Name=AL60_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17565;old_locus_tag=AL60_02446 NZ_KK316852.1 Protein Homology CDS 58701 59903 . - 0 ID=cds-WP_003409193.1;Parent=gene-AL60_RS17565;Dbxref=GenBank:WP_003409193.1;Name=WP_003409193.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216328.1;locus_tag=AL60_RS17565;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003409193.1;transl_table=11 NZ_KK316852.1 RefSeq gene 60225 60656 . - . ID=gene-AL60_RS17570;Name=AL60_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17570;old_locus_tag=AL60_02447 NZ_KK316852.1 Protein Homology CDS 60225 60656 . - 0 ID=cds-WP_003409199.1;Parent=gene-AL60_RS17570;Dbxref=GenBank:WP_003409199.1;Name=WP_003409199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216329.1;locus_tag=AL60_RS17570;product=DUF4189 domain-containing protein;protein_id=WP_003409199.1;transl_table=11 NZ_KK316852.1 RefSeq gene 61023 61967 . + . ID=gene-AL60_RS17575;Name=AL60_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17575;old_locus_tag=AL60_02448 NZ_KK316852.1 Protein Homology CDS 61023 61967 . + 0 ID=cds-WP_003899033.1;Parent=gene-AL60_RS17575;Dbxref=GenBank:WP_003899033.1;Name=WP_003899033.1;Ontology_term=GO:0006629,GO:0008610,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA,lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019283784.1;locus_tag=AL60_RS17575;product=sterol desaturase family protein;protein_id=WP_003899033.1;transl_table=11 NZ_KK316852.1 RefSeq gene 62072 62737 . + . ID=gene-AL60_RS17580;Name=AL60_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17580;old_locus_tag=AL60_02449 NZ_KK316852.1 Protein Homology CDS 62072 62737 . + 0 ID=cds-WP_003409204.1;Parent=gene-AL60_RS17580;Dbxref=GenBank:WP_003409204.1;Name=WP_003409204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216331.1;locus_tag=AL60_RS17580;product=Rv1815 family serine proteinase;protein_id=WP_003409204.1;transl_table=11 NZ_KK316852.1 RefSeq gene 62818 63504 . + . ID=gene-AL60_RS17585;Name=AL60_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17585;old_locus_tag=AL60_02450 NZ_KK316852.1 Protein Homology CDS 62818 63504 . + 0 ID=cds-WP_003899034.1;Parent=gene-AL60_RS17585;Dbxref=GenBank:WP_003899034.1;Name=WP_003899034.1;Ontology_term=GO:0006355,GO:0045892,GO:0046677,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725120.1;locus_tag=AL60_RS17585;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899034.1;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 63643 63920 . + . ID=gene-AL60_RS27605;Name=AL60_RS27605;end_range=63920,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27605;partial=true;pseudo=true NZ_KK316852.1 Protein Homology CDS 63643 63920 . + 0 ID=cds-AL60_RS27605;Parent=gene-AL60_RS27605;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=63920,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977032.1;locus_tag=AL60_RS27605;partial=true;product=VOC family protein;pseudo=true;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 63991 64065 . + . ID=gene-AL60_RS27610;Name=AL60_RS27610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27610;partial=true;pseudo=true;start_range=.,63991 NZ_KK316852.1 Protein Homology CDS 63991 64065 . + 0 ID=cds-AL60_RS27610;Parent=gene-AL60_RS27610;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217793.1;locus_tag=AL60_RS27610;partial=true;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;pseudo=true;start_range=.,63991;transl_table=11 NZ_KK316852.1 RefSeq gene 64139 65602 . + . ID=gene-AL60_RS17590;Name=AL60_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17590;old_locus_tag=AL60_02451 NZ_KK316852.1 Protein Homology CDS 64139 65602 . + 0 ID=cds-WP_003409207.1;Parent=gene-AL60_RS17590;Dbxref=GenBank:WP_003409207.1;Name=WP_003409207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216333.1;locus_tag=AL60_RS17590;product=FAD-binding protein;protein_id=WP_003409207.1;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 66697 67218 . - . ID=gene-AL60_RS27620;Name=AL60_RS27620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27620;partial=true;pseudo=true;start_range=.,66697 NZ_KK316852.1 Protein Homology CDS 66697 67218 . - 0 ID=cds-AL60_RS27620;Parent=gene-AL60_RS27620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177749.1;locus_tag=AL60_RS27620;partial=true;product=PE family protein;pseudo=true;start_range=.,66697;transl_table=11 NZ_KK316852.1 RefSeq gene 67353 69272 . - . ID=gene-AL60_RS17600;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=AL60_RS17600;old_locus_tag=AL60_02453 NZ_KK316852.1 Protein Homology CDS 67353 69272 . - 0 ID=cds-WP_003900416.1;Parent=gene-AL60_RS17600;Dbxref=GenBank:WP_003900416.1;Name=WP_003900416.1;gbkey=CDS;gene=bacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216335.1;locus_tag=AL60_RS17600;product=vitamin B12 ABC transporter pemease/ATP-binding protein BacA;protein_id=WP_003900416.1;transl_table=11 NZ_KK316852.1 RefSeq gene 69343 70986 . + . ID=gene-AL60_RS17605;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=AL60_RS17605;old_locus_tag=AL60_02454 NZ_KK316852.1 Protein Homology CDS 69343 70986 . + 0 ID=cds-WP_003409218.1;Parent=gene-AL60_RS17605;Dbxref=GenBank:WP_003409218.1;Name=WP_003409218.1;gbkey=CDS;gene=ilvG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216336.1;locus_tag=AL60_RS17605;product=acetolactate synthase;protein_id=WP_003409218.1;transl_table=11 NZ_KK316852.1 RefSeq gene 71091 73427 . + . ID=gene-AL60_RS17610;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=AL60_RS17610;old_locus_tag=AL60_02455 NZ_KK316852.1 Protein Homology CDS 71091 73427 . + 0 ID=cds-WP_003911668.1;Parent=gene-AL60_RS17610;Dbxref=GenBank:WP_003911668.1;Name=WP_003911668.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524,GO:0016020;gbkey=CDS;gene=secA2;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908708.1;locus_tag=AL60_RS17610;product=accessory Sec system translocase SecA2;protein_id=WP_003911668.1;transl_table=11 NZ_KK316852.1 RefSeq gene 73624 74253 . + . ID=gene-AL60_RS17615;Name=AL60_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17615;old_locus_tag=AL60_02456 NZ_KK316852.1 Protein Homology CDS 73624 74253 . + 0 ID=cds-WP_003409227.1;Parent=gene-AL60_RS17615;Dbxref=GenBank:WP_003409227.1;Name=WP_003409227.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216338.1;locus_tag=AL60_RS17615;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_003409227.1;transl_table=11 NZ_KK316852.1 RefSeq gene 74246 75169 . + . ID=gene-AL60_RS17620;Name=AL60_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17620;old_locus_tag=AL60_02457 NZ_KK316852.1 Protein Homology CDS 74246 75169 . + 0 ID=cds-WP_003901262.1;Parent=gene-AL60_RS17620;Dbxref=GenBank:WP_003901262.1;Name=WP_003901262.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216339.1;locus_tag=AL60_RS17620;product=DUF881 domain-containing protein;protein_id=WP_003901262.1;transl_table=11 NZ_KK316852.1 RefSeq gene 75198 75563 . + . ID=gene-AL60_RS17625;Name=AL60_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17625;old_locus_tag=AL60_02458 NZ_KK316852.1 Protein Homology CDS 75198 75563 . + 0 ID=cds-WP_003899037.1;Parent=gene-AL60_RS17625;Dbxref=GenBank:WP_003899037.1;Name=WP_003899037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216340.1;locus_tag=AL60_RS17625;product=small basic family protein;protein_id=WP_003899037.1;transl_table=11 NZ_KK316852.1 RefSeq gene 75580 76458 . + . ID=gene-AL60_RS17630;Name=AL60_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17630;old_locus_tag=AL60_02459 NZ_KK316852.1 Protein Homology CDS 75580 76458 . + 0 ID=cds-WP_003899038.1;Parent=gene-AL60_RS17630;Dbxref=GenBank:WP_003899038.1;Name=WP_003899038.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216341.1;locus_tag=AL60_RS17630;product=DUF881 domain-containing protein;protein_id=WP_003899038.1;transl_table=11 NZ_KK316852.1 RefSeq gene 76496 76900 . + . ID=gene-AL60_RS17635;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AL60_RS17635;old_locus_tag=AL60_02460 NZ_KK316852.1 Protein Homology CDS 76496 76900 . + 0 ID=cds-WP_003899040.1;Parent=gene-AL60_RS17635;Dbxref=GenBank:WP_003899040.1;Name=WP_003899040.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216342.1;locus_tag=AL60_RS17635;product=glycine cleavage system protein GcvH;protein_id=WP_003899040.1;transl_table=11 NZ_KK316852.1 RefSeq gene 77140 77628 . + . ID=gene-AL60_RS17640;Name=garA;gbkey=Gene;gene=garA;gene_biotype=protein_coding;locus_tag=AL60_RS17640;old_locus_tag=AL60_02461 NZ_KK316852.1 Protein Homology CDS 77140 77628 . + 0 ID=cds-WP_003899041.1;Parent=gene-AL60_RS17640;Dbxref=GenBank:WP_003899041.1;Name=WP_003899041.1;gbkey=CDS;gene=garA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216343.1;locus_tag=AL60_RS17640;product=glycogen accumulation regulator GarA;protein_id=WP_003899041.1;transl_table=11 NZ_KK316852.1 RefSeq gene 77625 78368 . + . ID=gene-AL60_RS17645;Name=ftsR;gbkey=Gene;gene=ftsR;gene_biotype=protein_coding;locus_tag=AL60_RS17645;old_locus_tag=AL60_02462 NZ_KK316852.1 Protein Homology CDS 77625 78368 . + 0 ID=cds-WP_003409239.1;Parent=gene-AL60_RS17645;Dbxref=GenBank:WP_003409239.1;Name=WP_003409239.1;gbkey=CDS;gene=ftsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216344.1;locus_tag=AL60_RS17645;product=transcriptional regulator FtsR;protein_id=WP_003409239.1;transl_table=11 NZ_KK316852.1 RefSeq gene 78487 78981 . + . ID=gene-AL60_RS17650;Name=AL60_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17650;old_locus_tag=AL60_02463 NZ_KK316852.1 Protein Homology CDS 78487 78981 . + 0 ID=cds-WP_003409242.1;Parent=gene-AL60_RS17650;Dbxref=GenBank:WP_003409242.1;Name=WP_003409242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409242.1;locus_tag=AL60_RS17650;product=bifunctional nuclease family protein;protein_id=WP_003409242.1;transl_table=11 NZ_KK316852.1 RefSeq gene 79430 80062 . + . ID=gene-AL60_RS17655;Name=AL60_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17655;old_locus_tag=AL60_02464 NZ_KK316852.1 Protein Homology CDS 79430 80062 . + 0 ID=cds-WP_003911669.1;Parent=gene-AL60_RS17655;Dbxref=GenBank:WP_003911669.1;Name=WP_003911669.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007771372.1;locus_tag=AL60_RS17655;product=MerR family transcriptional regulator;protein_id=WP_003911669.1;transl_table=11 NZ_KK316852.1 cmsearch riboswitch 80157 80254 . + . ID=id-NZ_KK316852.1:80157..80254;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316852.1 cmsearch riboswitch 80255 80388 . + . ID=id-NZ_KK316852.1:80255..80388;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316852.1 RefSeq gene 80421 83246 . + . ID=gene-AL60_RS17665;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=AL60_RS17665;old_locus_tag=AL60_02466 NZ_KK316852.1 Protein Homology CDS 80421 83246 . + 0 ID=cds-WP_003900418.1;Parent=gene-AL60_RS17665;Dbxref=GenBank:WP_003900418.1;Name=WP_003900418.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216348.1;locus_tag=AL60_RS17665;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_003900418.1;transl_table=11 NZ_KK316852.1 RefSeq gene 83473 84333 . - . ID=gene-AL60_RS17670;Name=AL60_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17670;old_locus_tag=AL60_02467 NZ_KK316852.1 Protein Homology CDS 83473 84333 . - 0 ID=cds-WP_003409254.1;Parent=gene-AL60_RS17670;Dbxref=GenBank:WP_003409254.1;Name=WP_003409254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216349.1;locus_tag=AL60_RS17670;product=haloalkane dehalogenase;protein_id=WP_003409254.1;transl_table=11 NZ_KK316852.1 RefSeq gene 84374 85240 . + . ID=gene-AL60_RS17675;Name=lipZ;gbkey=Gene;gene=lipZ;gene_biotype=protein_coding;locus_tag=AL60_RS17675;old_locus_tag=AL60_02468 NZ_KK316852.1 Protein Homology CDS 84374 85240 . + 0 ID=cds-WP_003409255.1;Parent=gene-AL60_RS17675;Dbxref=GenBank:WP_003409255.1;Name=WP_003409255.1;gbkey=CDS;gene=lipZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216350.1;locus_tag=AL60_RS17675;product=alpha/beta fold hydrolase;protein_id=WP_003409255.1;transl_table=11 NZ_KK316852.1 RefSeq gene 85245 87131 . - . ID=gene-AL60_RS17680;Name=AL60_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17680;old_locus_tag=AL60_02469 NZ_KK316852.1 Protein Homology CDS 85245 87131 . - 0 ID=cds-WP_003409258.1;Parent=gene-AL60_RS17680;Dbxref=GenBank:WP_003409258.1;Name=WP_003409258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216351.1;locus_tag=AL60_RS17680;product=CocE/NonD family hydrolase;protein_id=WP_003409258.1;transl_table=11 NZ_KK316852.1 RefSeq gene 87147 89180 . - . ID=gene-AL60_RS17685;Name=AL60_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17685;old_locus_tag=AL60_02470 NZ_KK316852.1 Protein Homology CDS 87147 89180 . - 0 ID=cds-WP_003901265.1;Parent=gene-AL60_RS17685;Dbxref=GenBank:WP_003901265.1;Name=WP_003901265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216352.1;locus_tag=AL60_RS17685;product=substrate-binding domain-containing protein;protein_id=WP_003901265.1;transl_table=11 NZ_KK316852.1 RefSeq gene 89300 91525 . - . ID=gene-AL60_RS17690;Name=glcB;gbkey=Gene;gene=glcB;gene_biotype=protein_coding;locus_tag=AL60_RS17690;old_locus_tag=AL60_02471 NZ_KK316852.1 Protein Homology CDS 89300 91525 . - 0 ID=cds-WP_003409271.1;Parent=gene-AL60_RS17690;Dbxref=GenBank:WP_003409271.1;Name=WP_003409271.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=glcB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216353.1;locus_tag=AL60_RS17690;product=malate synthase G;protein_id=WP_003409271.1;transl_table=11 NZ_KK316852.1 RefSeq gene 91801 92196 . - . ID=gene-AL60_RS17695;Name=AL60_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17695;old_locus_tag=AL60_02472 NZ_KK316852.1 Protein Homology CDS 91801 92196 . - 0 ID=cds-WP_003409273.1;Parent=gene-AL60_RS17695;Dbxref=GenBank:WP_003409273.1;Name=WP_003409273.1;Ontology_term=GO:0004540,GO:0046872,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216354.1;locus_tag=AL60_RS17695;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003409273.1;transl_table=11 NZ_KK316852.1 RefSeq gene 92193 92456 . - . ID=gene-AL60_RS17700;Name=AL60_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17700;old_locus_tag=AL60_02473 NZ_KK316852.1 Protein Homology CDS 92193 92456 . - 0 ID=cds-WP_003409276.1;Parent=gene-AL60_RS17700;Dbxref=GenBank:WP_003409276.1;Name=WP_003409276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216355.1;locus_tag=AL60_RS17700;product=antitoxin;protein_id=WP_003409276.1;transl_table=11 NZ_KK316852.1 RefSeq gene 92515 94062 . - . ID=gene-AL60_RS17705;Name=AL60_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17705;old_locus_tag=AL60_02474 NZ_KK316852.1 Protein Homology CDS 92515 94062 . - 0 ID=cds-WP_031721511.1;Parent=gene-AL60_RS17705;Dbxref=GenBank:WP_031721511.1;Name=WP_031721511.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177847.1;locus_tag=AL60_RS17705;product=PE family protein;protein_id=WP_031721511.1;transl_table=11 NZ_KK316852.1 RefSeq gene 94225 95262 . - . ID=gene-AL60_RS17710;Name=AL60_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17710;old_locus_tag=AL60_02475 NZ_KK316852.1 Protein Homology CDS 94225 95262 . - 0 ID=cds-WP_003900419.1;Parent=gene-AL60_RS17710;Dbxref=GenBank:WP_003900419.1;Name=WP_003900419.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216357.1;locus_tag=AL60_RS17710;product=hemolysin family protein;protein_id=WP_003900419.1;transl_table=11 NZ_KK316852.1 RefSeq gene 95262 96629 . - . ID=gene-AL60_RS17715;Name=AL60_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17715;old_locus_tag=AL60_02476 NZ_KK316852.1 Protein Homology CDS 95262 96629 . - 0 ID=cds-WP_003899046.1;Parent=gene-AL60_RS17715;Dbxref=GenBank:WP_003899046.1;Name=WP_003899046.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216358.1;locus_tag=AL60_RS17715;product=hemolysin family protein;protein_id=WP_003899046.1;transl_table=11 NZ_KK316852.1 RefSeq gene 96803 98242 . - . ID=gene-AL60_RS17720;Name=AL60_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17720;old_locus_tag=AL60_02477 NZ_KK316852.1 Protein Homology CDS 96803 98242 . - 0 ID=cds-WP_003902189.1;Parent=gene-AL60_RS17720;Dbxref=GenBank:WP_003902189.1;Name=WP_003902189.1;Ontology_term=GO:0003938;gbkey=CDS;go_function=IMP dehydrogenase activity|0003938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216359.1;locus_tag=AL60_RS17720;product=GuaB1 family IMP dehydrogenase-related protein;protein_id=WP_003902189.1;transl_table=11 NZ_KK316852.1 RefSeq gene 98275 99726 . - . ID=gene-AL60_RS17725;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AL60_RS17725;old_locus_tag=AL60_02478 NZ_KK316852.1 Protein Homology CDS 98275 99726 . - 0 ID=cds-WP_003409284.1;Parent=gene-AL60_RS17725;Dbxref=GenBank:WP_003409284.1;Name=WP_003409284.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177848.1;locus_tag=AL60_RS17725;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_003409284.1;transl_table=11 NZ_KK316852.1 RefSeq gene 99756 100706 . - . ID=gene-AL60_RS17730;Name=blaR;gbkey=Gene;gene=blaR;gene_biotype=protein_coding;locus_tag=AL60_RS17730;old_locus_tag=AL60_02479 NZ_KK316852.1 Protein Homology CDS 99756 100706 . - 0 ID=cds-WP_003409298.1;Parent=gene-AL60_RS17730;Dbxref=GenBank:WP_003409298.1;Name=WP_003409298.1;Ontology_term=GO:0008233,GO:0046872,GO:0016020;gbkey=CDS;gene=blaR;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216361.1;locus_tag=AL60_RS17730;product=M56 family metallopeptidase;protein_id=WP_003409298.1;transl_table=11 NZ_KK316852.1 RefSeq gene 100721 101137 . - . ID=gene-AL60_RS17735;Name=blaI;gbkey=Gene;gene=blaI;gene_biotype=protein_coding;locus_tag=AL60_RS17735;old_locus_tag=AL60_02480 NZ_KK316852.1 Protein Homology CDS 100721 101137 . - 0 ID=cds-WP_003409301.1;Parent=gene-AL60_RS17735;Dbxref=GenBank:WP_003409301.1;Name=WP_003409301.1;gbkey=CDS;gene=blaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216362.1;locus_tag=AL60_RS17735;product=transcriptional repressor BlaI;protein_id=WP_003409301.1;transl_table=11 NZ_KK316852.1 RefSeq gene 101415 101837 . + . ID=gene-AL60_RS17740;Name=AL60_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17740;old_locus_tag=AL60_02481 NZ_KK316852.1 Protein Homology CDS 101415 101837 . + 0 ID=cds-WP_003899048.1;Parent=gene-AL60_RS17740;Dbxref=GenBank:WP_003899048.1;Name=WP_003899048.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216363.1;locus_tag=AL60_RS17740;product=PaaI family thioesterase;protein_id=WP_003899048.1;transl_table=11 NZ_KK316852.1 RefSeq gene 101886 102188 . + . ID=gene-AL60_RS17745;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;locus_tag=AL60_RS17745;old_locus_tag=AL60_02482 NZ_KK316852.1 Protein Homology CDS 101886 102188 . + 0 ID=cds-WP_003409305.1;Parent=gene-AL60_RS17745;Dbxref=GenBank:WP_003409305.1;Name=WP_003409305.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;gene=ureA;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216364.1;locus_tag=AL60_RS17745;product=urease subunit gamma;protein_id=WP_003409305.1;transl_table=11 NZ_KK316852.1 RefSeq gene 102185 102499 . + . ID=gene-AL60_RS17750;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=AL60_RS17750;old_locus_tag=AL60_02483 NZ_KK316852.1 Protein Homology CDS 102185 102499 . + 0 ID=cds-WP_003409308.1;Parent=gene-AL60_RS17750;Dbxref=GenBank:WP_003409308.1;Name=WP_003409308.1;gbkey=CDS;gene=ureB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216365.1;locus_tag=AL60_RS17750;product=urease subunit beta;protein_id=WP_003409308.1;transl_table=11 NZ_KK316852.1 RefSeq gene 102499 104232 . + . ID=gene-AL60_RS17755;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=AL60_RS17755;old_locus_tag=AL60_02484 NZ_KK316852.1 Protein Homology CDS 102499 104232 . + 0 ID=cds-WP_003899049.1;Parent=gene-AL60_RS17755;Dbxref=GenBank:WP_003899049.1;Name=WP_003899049.1;Ontology_term=GO:0008152,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216366.1;locus_tag=AL60_RS17755;product=urease subunit alpha;protein_id=WP_003899049.1;transl_table=11 NZ_KK316852.1 RefSeq gene 104232 104867 . + . ID=gene-AL60_RS17760;Name=ureF;gbkey=Gene;gene=ureF;gene_biotype=protein_coding;locus_tag=AL60_RS17760;old_locus_tag=AL60_02485 NZ_KK316852.1 Protein Homology CDS 104232 104867 . + 0 ID=cds-WP_003899050.1;Parent=gene-AL60_RS17760;Dbxref=GenBank:WP_003899050.1;Name=WP_003899050.1;Ontology_term=GO:0016151;gbkey=CDS;gene=ureF;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216367.1;locus_tag=AL60_RS17760;product=urease accessory protein UreF;protein_id=WP_003899050.1;transl_table=11 NZ_KK316852.1 RefSeq gene 104878 105552 . + . ID=gene-AL60_RS17765;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=AL60_RS17765;old_locus_tag=AL60_02486 NZ_KK316852.1 Protein Homology CDS 104878 105552 . + 0 ID=cds-WP_003409313.1;Parent=gene-AL60_RS17765;Dbxref=GenBank:WP_003409313.1;Name=WP_003409313.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216368.1;locus_tag=AL60_RS17765;product=urease accessory protein UreG;protein_id=WP_003409313.1;transl_table=11 NZ_KK316852.1 RefSeq gene 105542 106186 . + . ID=gene-AL60_RS17770;Name=ureD;gbkey=Gene;gene=ureD;gene_biotype=protein_coding;locus_tag=AL60_RS17770;old_locus_tag=AL60_02487 NZ_KK316852.1 Protein Homology CDS 105542 106186 . + 0 ID=cds-WP_003900422.1;Parent=gene-AL60_RS17770;Dbxref=GenBank:WP_003900422.1;Name=WP_003900422.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;gene=ureD;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900422.1;locus_tag=AL60_RS17770;product=urease accessory protein UreD;protein_id=WP_003900422.1;transl_table=11 NZ_KK316852.1 RefSeq gene 106189 107580 . - . ID=gene-AL60_RS17775;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=AL60_RS17775;old_locus_tag=AL60_02488 NZ_KK316852.1 Protein Homology CDS 106189 107580 . - 0 ID=cds-WP_003409317.1;Parent=gene-AL60_RS17775;Dbxref=GenBank:WP_003409317.1;Name=WP_003409317.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;gene=ndh;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216370.1;locus_tag=AL60_RS17775;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003409317.1;transl_table=11 NZ_KK316852.1 RefSeq gene 107722 108645 . - . ID=gene-AL60_RS17780;Name=AL60_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17780;old_locus_tag=AL60_02489 NZ_KK316852.1 Protein Homology CDS 107722 108645 . - 0 ID=cds-WP_003409319.1;Parent=gene-AL60_RS17780;Dbxref=GenBank:WP_003409319.1;Name=WP_003409319.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216371.1;locus_tag=AL60_RS17780;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003409319.1;transl_table=11 NZ_KK316852.1 RefSeq gene 108684 109361 . - . ID=gene-AL60_RS17785;Name=AL60_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17785;old_locus_tag=AL60_02490 NZ_KK316852.1 Protein Homology CDS 108684 109361 . - 0 ID=cds-WP_003409323.1;Parent=gene-AL60_RS17785;Dbxref=GenBank:WP_003409323.1;Name=WP_003409323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216372.1;locus_tag=AL60_RS17785;product=SDR family oxidoreductase;protein_id=WP_003409323.1;transl_table=11 NZ_KK316852.1 RefSeq gene 109523 110308 . + . ID=gene-AL60_RS17790;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=AL60_RS17790;old_locus_tag=AL60_02491 NZ_KK316852.1 Protein Homology CDS 109523 110308 . + 0 ID=cds-WP_003409326.1;Parent=gene-AL60_RS17790;Dbxref=GenBank:WP_003409326.1;Name=WP_003409326.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216373.1;locus_tag=AL60_RS17790;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_003409326.1;transl_table=11 NZ_KK316852.1 RefSeq gene 110311 111105 . + . ID=gene-AL60_RS17795;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=AL60_RS17795;old_locus_tag=AL60_02492 NZ_KK316852.1 Protein Homology CDS 110311 111105 . + 0 ID=cds-WP_003409329.1;Parent=gene-AL60_RS17795;Dbxref=GenBank:WP_003409329.1;Name=WP_003409329.1;Ontology_term=GO:0055085,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216374.1;locus_tag=AL60_RS17795;product=ABC transporter permease;protein_id=WP_003409329.1;transl_table=11 NZ_KK316852.1 RefSeq gene 111112 112221 . + . ID=gene-AL60_RS17800;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=AL60_RS17800;old_locus_tag=AL60_02493 NZ_KK316852.1 Protein Homology CDS 111112 112221 . + 0 ID=cds-WP_003899051.1;Parent=gene-AL60_RS17800;Dbxref=GenBank:WP_003899051.1;Name=WP_003899051.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=modC;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216375.1;locus_tag=AL60_RS17800;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_003899051.1;transl_table=11 NZ_KK316852.1 RefSeq gene 112274 113251 . + . ID=gene-AL60_RS17805;Name=apa;gbkey=Gene;gene=apa;gene_biotype=protein_coding;locus_tag=AL60_RS17805;old_locus_tag=AL60_02494 NZ_KK316852.1 Protein Homology CDS 112274 113251 . + 0 ID=cds-WP_003409337.1;Parent=gene-AL60_RS17805;Dbxref=GenBank:WP_003409337.1;Name=WP_003409337.1;gbkey=CDS;gene=apa;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177849.1;locus_tag=AL60_RS17805;product=adhesin Apa;protein_id=WP_003409337.1;transl_table=11 NZ_KK316852.1 RefSeq gene 113703 114008 . + . ID=gene-AL60_RS17810;Name=AL60_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17810;old_locus_tag=AL60_02495 NZ_KK316852.1 Protein Homology CDS 113703 114008 . + 0 ID=cds-WP_003409339.1;Parent=gene-AL60_RS17810;Dbxref=GenBank:WP_003409339.1;Name=WP_003409339.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216377.1;locus_tag=AL60_RS17810;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_003409339.1;transl_table=11 NZ_KK316852.1 RefSeq gene 114083 115123 . + . ID=gene-AL60_RS17815;Name=adhA;gbkey=Gene;gene=adhA;gene_biotype=protein_coding;locus_tag=AL60_RS17815;old_locus_tag=AL60_02496 NZ_KK316852.1 Protein Homology CDS 114083 115123 . + 0 ID=cds-WP_003409345.1;Parent=gene-AL60_RS17815;Dbxref=GenBank:WP_003409345.1;Name=WP_003409345.1;Ontology_term=GO:0006113,GO:0004022,GO:0008270;gbkey=CDS;gene=adhA;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216378.1;locus_tag=AL60_RS17815;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_003409345.1;transl_table=11 NZ_KK316852.1 RefSeq gene 115130 115900 . - . ID=gene-AL60_RS17820;Name=AL60_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17820;old_locus_tag=AL60_02497 NZ_KK316852.1 Protein Homology CDS 115130 115900 . - 0 ID=cds-WP_003899053.1;Parent=gene-AL60_RS17820;Dbxref=GenBank:WP_003899053.1;Name=WP_003899053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003927504.1;locus_tag=AL60_RS17820;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_003899053.1;transl_table=11 NZ_KK316852.1 RefSeq gene 115893 116579 . - . ID=gene-AL60_RS17825;Name=AL60_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17825;old_locus_tag=AL60_02498 NZ_KK316852.1 Protein Homology CDS 115893 116579 . - 0 ID=cds-WP_003911693.1;Parent=gene-AL60_RS17825;Dbxref=GenBank:WP_003911693.1;Name=WP_003911693.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911693.1;locus_tag=AL60_RS17825;product=MOSC domain-containing protein;protein_id=WP_003911693.1;transl_table=11 NZ_KK316852.1 RefSeq gene 116645 117505 . - . ID=gene-AL60_RS17830;Name=AL60_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17830;old_locus_tag=AL60_02499 NZ_KK316852.1 Protein Homology CDS 116645 117505 . - 0 ID=cds-WP_003409355.1;Parent=gene-AL60_RS17830;Dbxref=GenBank:WP_003409355.1;Name=WP_003409355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216381.1;locus_tag=AL60_RS17830;product=SDR family oxidoreductase;protein_id=WP_003409355.1;transl_table=11 NZ_KK316852.1 RefSeq gene 117601 120015 . + . ID=gene-AL60_RS17835;Name=AL60_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17835;old_locus_tag=AL60_02500 NZ_KK316852.1 Protein Homology CDS 117601 120015 . + 0 ID=cds-WP_003900424.1;Parent=gene-AL60_RS17835;Dbxref=GenBank:WP_003900424.1;Name=WP_003900424.1;Ontology_term=GO:0003824,GO:0008410;gbkey=CDS;go_function=catalytic activity|0003824||IEA,CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010924453.1;locus_tag=AL60_RS17835;product=CaiB/BaiF CoA-transferase family protein;protein_id=WP_003900424.1;transl_table=11 NZ_KK316852.1 RefSeq gene 120303 121787 . + . ID=gene-AL60_RS17840;Name=AL60_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17840;old_locus_tag=AL60_02501 NZ_KK316852.1 Protein Homology CDS 120303 121787 . + 0 ID=cds-WP_003409362.1;Parent=gene-AL60_RS17840;Dbxref=GenBank:WP_003409362.1;Name=WP_003409362.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216383.1;locus_tag=AL60_RS17840;product=acetyl-CoA acetyltransferase;protein_id=WP_003409362.1;transl_table=11 NZ_KK316852.1 RefSeq gene 121886 123985 . + . ID=gene-AL60_RS17845;Name=AL60_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17845;old_locus_tag=AL60_02502 NZ_KK316852.1 Protein Homology CDS 121886 123985 . + 0 ID=cds-WP_003409374.1;Parent=gene-AL60_RS17845;Dbxref=GenBank:WP_003409374.1;Name=WP_003409374.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216384.1;locus_tag=AL60_RS17845;product=NAD(P)H-binding protein;protein_id=WP_003409374.1;transl_table=11 NZ_KK316852.1 RefSeq gene 123999 125234 . - . ID=gene-AL60_RS17850;Name=AL60_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17850;old_locus_tag=AL60_02503 NZ_KK316852.1 Protein Homology CDS 123999 125234 . - 0 ID=cds-WP_003899055.1;Parent=gene-AL60_RS17850;Dbxref=GenBank:WP_003899055.1;Name=WP_003899055.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216385.1;locus_tag=AL60_RS17850;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003899055.1;transl_table=11 NZ_KK316852.1 RefSeq gene 125334 125948 . - . ID=gene-AL60_RS17855;Name=AL60_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17855;old_locus_tag=AL60_02504 NZ_KK316852.1 Protein Homology CDS 125334 125948 . - 0 ID=cds-WP_042508090.1;Parent=gene-AL60_RS17855;Dbxref=GenBank:WP_042508090.1;Name=WP_042508090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917541.1;locus_tag=AL60_RS17855;product=hypothetical protein;protein_id=WP_042508090.1;transl_table=11 NZ_KK316852.1 RefSeq gene 126034 126423 . - . ID=gene-AL60_RS17860;Name=AL60_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17860;old_locus_tag=AL60_02505 NZ_KK316852.1 Protein Homology CDS 126034 126423 . - 0 ID=cds-WP_003409380.1;Parent=gene-AL60_RS17860;Dbxref=GenBank:WP_003409380.1;Name=WP_003409380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216387.1;locus_tag=AL60_RS17860;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003409380.1;transl_table=11 NZ_KK316852.1 RefSeq gene 126446 127690 . - . ID=gene-AL60_RS17865;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AL60_RS17865;old_locus_tag=AL60_02506 NZ_KK316852.1 Protein Homology CDS 126446 127690 . - 0 ID=cds-WP_003899057.1;Parent=gene-AL60_RS17865;Dbxref=GenBank:WP_003899057.1;Name=WP_003899057.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216388.1;locus_tag=AL60_RS17865;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_003899057.1;transl_table=11 NZ_KK316852.1 RefSeq gene 127713 128150 . + . ID=gene-AL60_RS17870;Name=AL60_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17870;old_locus_tag=AL60_02507 NZ_KK316852.1 Protein Homology CDS 127713 128150 . + 0 ID=cds-WP_003409385.1;Parent=gene-AL60_RS17870;Dbxref=GenBank:WP_003409385.1;Name=WP_003409385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216389.1;locus_tag=AL60_RS17870;product=DUF1810 domain-containing protein;protein_id=WP_003409385.1;transl_table=11 NZ_KK316852.1 RefSeq gene 128205 128909 . + . ID=gene-AL60_RS17875;Name=AL60_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17875;old_locus_tag=AL60_02508 NZ_KK316852.1 Protein Homology CDS 128205 128909 . + 0 ID=cds-WP_003899058.1;Parent=gene-AL60_RS17875;Dbxref=GenBank:WP_003899058.1;Name=WP_003899058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487708.1;locus_tag=AL60_RS17875;product=EthD domain-containing protein;protein_id=WP_003899058.1;transl_table=11 NZ_KK316852.1 RefSeq gene 128920 129363 . + . ID=gene-AL60_RS17880;Name=AL60_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17880;old_locus_tag=AL60_02509 NZ_KK316852.1 Protein Homology CDS 128920 129363 . + 0 ID=cds-WP_003899059.1;Parent=gene-AL60_RS17880;Dbxref=GenBank:WP_003899059.1;Name=WP_003899059.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216391.1;locus_tag=AL60_RS17880;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003899059.1;transl_table=11 NZ_KK316852.1 RefSeq gene 129369 129581 . - . ID=gene-AL60_RS26110;Name=AL60_RS26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26110 NZ_KK316852.1 Protein Homology CDS 129369 129581 . - 0 ID=cds-WP_003910872.1;Parent=gene-AL60_RS26110;Dbxref=GenBank:WP_003910872.1;Name=WP_003910872.1;Ontology_term=GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003910872.1;locus_tag=AL60_RS26110;product=(2Fe-2S)-binding protein;protein_id=WP_003910872.1;transl_table=11 NZ_KK316852.1 RefSeq gene 129879 130358 . + . ID=gene-AL60_RS17885;Name=bfrA;gbkey=Gene;gene=bfrA;gene_biotype=protein_coding;locus_tag=AL60_RS17885;old_locus_tag=AL60_02510 NZ_KK316852.1 Protein Homology CDS 129879 130358 . + 0 ID=cds-WP_003409398.1;Parent=gene-AL60_RS17885;Dbxref=GenBank:WP_003409398.1;Name=WP_003409398.1;gbkey=CDS;gene=bfrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003876561.1;locus_tag=AL60_RS17885;product=bacterioferritin BfrA;protein_id=WP_003409398.1;transl_table=11 NZ_KK316852.1 RefSeq gene 130443 132506 . + . ID=gene-AL60_RS17890;Name=AL60_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17890;old_locus_tag=AL60_02511 NZ_KK316852.1 Protein Homology CDS 130443 132506 . + 0 ID=cds-WP_003899060.1;Parent=gene-AL60_RS17890;Dbxref=GenBank:WP_003899060.1;Name=WP_003899060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216393.1;locus_tag=AL60_RS17890;product=Rv1877 family multidrug efflux MFS transporter;protein_id=WP_003899060.1;transl_table=11 NZ_KK316852.1 RefSeq gene 132561 133913 . + . ID=gene-AL60_RS17895;Name=AL60_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17895;old_locus_tag=AL60_02512 NZ_KK316852.1 Protein Homology CDS 132561 133913 . + 0 ID=cds-WP_003409401.1;Parent=gene-AL60_RS17895;Dbxref=GenBank:WP_003409401.1;Name=WP_003409401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216394.1;locus_tag=AL60_RS17895;product=type I glutamate--ammonia ligase;protein_id=WP_003409401.1;transl_table=11 NZ_KK316852.1 RefSeq gene 133916 135052 . + . ID=gene-AL60_RS17900;Name=AL60_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17900;old_locus_tag=AL60_02513 NZ_KK316852.1 Protein Homology CDS 133916 135052 . + 0 ID=cds-WP_003899061.1;Parent=gene-AL60_RS17900;Dbxref=GenBank:WP_003899061.1;Name=WP_003899061.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216395.1;locus_tag=AL60_RS17900;product=amidohydrolase family protein;protein_id=WP_003899061.1;transl_table=11 NZ_KK316852.1 RefSeq gene 135080 136396 . - . ID=gene-AL60_RS17905;Name=AL60_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17905;old_locus_tag=AL60_02514 NZ_KK316852.1 Protein Homology CDS 135080 136396 . - 0 ID=cds-WP_003409406.1;Parent=gene-AL60_RS17905;Dbxref=GenBank:WP_003409406.1;Name=WP_003409406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216396.3;locus_tag=AL60_RS17905;product=cytochrome P450;protein_id=WP_003409406.1;transl_table=11 NZ_KK316852.1 RefSeq gene 136446 136868 . - . ID=gene-AL60_RS17910;Name=lppE;gbkey=Gene;gene=lppE;gene_biotype=protein_coding;locus_tag=AL60_RS17910;old_locus_tag=AL60_02515 NZ_KK316852.1 Protein Homology CDS 136446 136868 . - 0 ID=cds-WP_003409409.1;Parent=gene-AL60_RS17910;Dbxref=GenBank:WP_003409409.1;Name=WP_003409409.1;gbkey=CDS;gene=lppE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216397.1;locus_tag=AL60_RS17910;product=lipoprotein LpqH;protein_id=WP_003409409.1;transl_table=11 NZ_KK316852.1 RefSeq gene 136909 137742 . - . ID=gene-AL60_RS17915;Name=AL60_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17915;old_locus_tag=AL60_02516 NZ_KK316852.1 Protein Homology CDS 136909 137742 . - 0 ID=cds-WP_003409413.1;Parent=gene-AL60_RS17915;Dbxref=GenBank:WP_003409413.1;Name=WP_003409413.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216398.1;locus_tag=AL60_RS17915;product=SDR family oxidoreductase;protein_id=WP_003409413.1;transl_table=11 NZ_KK316852.1 RefSeq gene 137770 138246 . - . ID=gene-AL60_RS17920;Name=AL60_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17920;old_locus_tag=AL60_02517 NZ_KK316852.1 Protein Homology CDS 137770 138246 . - 0 ID=cds-WP_003409417.1;Parent=gene-AL60_RS17920;Dbxref=GenBank:WP_003409417.1;Name=WP_003409417.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216399.1;locus_tag=AL60_RS17920;product=SRPBCC family protein;protein_id=WP_003409417.1;transl_table=11 NZ_KK316852.1 RefSeq gene 138285 138815 . - . ID=gene-AL60_RS0104965;Name=rpfC;gbkey=Gene;gene=rpfC;gene_biotype=protein_coding;locus_tag=AL60_RS0104965;old_locus_tag=AL60_02518 NZ_KK316852.1 Protein Homology CDS 138285 138815 . - 0 ID=cds-WP_003409420.1;Parent=gene-AL60_RS0104965;Dbxref=GenBank:WP_003409420.1;Name=WP_003409420.1;Ontology_term=GO:0009372,GO:0042127,GO:0016787;gbkey=CDS;gene=rpfC;go_function=hydrolase activity|0016787||IEA;go_process=quorum sensing|0009372||IEA,regulation of cell population proliferation|0042127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216400.1;locus_tag=AL60_RS0104965;product=resuscitation-promoting factor RpfC;protein_id=WP_003409420.1;transl_table=11 NZ_KK316852.1 RefSeq gene 138827 139426 . - . ID=gene-AL60_RS17925;Name=AL60_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17925;old_locus_tag=AL60_02519 NZ_KK316852.1 Protein Homology CDS 138827 139426 . - 0 ID=cds-WP_003899064.1;Parent=gene-AL60_RS17925;Dbxref=GenBank:WP_003899064.1;Name=WP_003899064.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216401.1;locus_tag=AL60_RS17925;product=chorismate mutase;protein_id=WP_003899064.1;transl_table=11 NZ_KK316852.1 RefSeq gene 139444 140421 . - . ID=gene-AL60_RS17930;Name=ag85B;gbkey=Gene;gene=ag85B;gene_biotype=protein_coding;gene_synonym=fbpB;locus_tag=AL60_RS17930;old_locus_tag=AL60_02520 NZ_KK316852.1 Protein Homology CDS 139444 140421 . - 0 ID=cds-WP_003409456.1;Parent=gene-AL60_RS17930;Dbxref=GenBank:WP_003409456.1;Name=WP_003409456.1;gbkey=CDS;gene=ag85B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216402.1;locus_tag=AL60_RS17930;product=diacylglycerol acyltransferase/mycolyltransferase Ag85B;protein_id=WP_003409456.1;transl_table=11 NZ_KK316852.1 RefSeq gene 140812 141954 . + . ID=gene-AL60_RS17935;Name=AL60_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17935;old_locus_tag=AL60_02521 NZ_KK316852.1 Protein Homology CDS 140812 141954 . + 0 ID=cds-WP_003899065.1;Parent=gene-AL60_RS17935;Dbxref=GenBank:WP_003899065.1;Name=WP_003899065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216403.1;locus_tag=AL60_RS17935;product=DUF7159 family protein;protein_id=WP_003899065.1;transl_table=11 NZ_KK316852.1 RefSeq gene 141924 142643 . - . ID=gene-AL60_RS0104970;Name=AL60_RS0104970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0104970;old_locus_tag=AL60_02522 NZ_KK316852.1 Protein Homology CDS 141924 142643 . - 0 ID=cds-WP_003409492.1;Parent=gene-AL60_RS0104970;Dbxref=GenBank:WP_003409492.1;Name=WP_003409492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409492.1;locus_tag=AL60_RS0104970;product=DUF4389 domain-containing protein;protein_id=WP_003409492.1;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 142738 143581 . - . ID=gene-AL60_RS27335;Name=AL60_RS27335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27335;pseudo=true NZ_KK316852.1 Protein Homology CDS 142738 143581 . - 0 ID=cds-AL60_RS27335;Parent=gene-AL60_RS27335;Note=frameshifted;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020786876.1;locus_tag=AL60_RS27335;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_KK316852.1 RefSeq gene 143640 144191 . - . ID=gene-AL60_RS17940;Name=AL60_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17940;old_locus_tag=AL60_02525 NZ_KK316852.1 Protein Homology CDS 143640 144191 . - 0 ID=cds-WP_003911699.1;Parent=gene-AL60_RS17940;Dbxref=GenBank:WP_003911699.1;Name=WP_003911699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911699.1;locus_tag=AL60_RS17940;product=YceI family protein;protein_id=WP_003911699.1;transl_table=11 NZ_KK316852.1 RefSeq gene 144305 144712 . + . ID=gene-AL60_RS17945;Name=AL60_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17945;old_locus_tag=AL60_02526 NZ_KK316852.1 Protein Homology CDS 144305 144712 . + 0 ID=cds-WP_003409509.1;Parent=gene-AL60_RS17945;Dbxref=GenBank:WP_003409509.1;Name=WP_003409509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216407.1;locus_tag=AL60_RS17945;product=hypothetical protein;protein_id=WP_003409509.1;transl_table=11 NZ_KK316852.1 RefSeq gene 144729 145040 . + . ID=gene-AL60_RS17950;Name=AL60_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17950;old_locus_tag=AL60_02527 NZ_KK316852.1 Protein Homology CDS 144729 145040 . + 0 ID=cds-WP_003409512.1;Parent=gene-AL60_RS17950;Dbxref=GenBank:WP_003409512.1;Name=WP_003409512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216408.1;locus_tag=AL60_RS17950;product=hypothetical protein;protein_id=WP_003409512.1;transl_table=11 NZ_KK316852.1 RefSeq gene 145050 145268 . + . ID=gene-AL60_RS17955;Name=AL60_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17955;old_locus_tag=AL60_02528 NZ_KK316852.1 Protein Homology CDS 145050 145268 . + 0 ID=cds-WP_003409515.1;Parent=gene-AL60_RS17955;Dbxref=GenBank:WP_003409515.1;Name=WP_003409515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216409.1;locus_tag=AL60_RS17955;product=Rv1893 family protein;protein_id=WP_003409515.1;transl_table=11 NZ_KK316852.1 RefSeq gene 145303 146433 . - . ID=gene-AL60_RS17960;Name=AL60_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17960;old_locus_tag=AL60_02529 NZ_KK316852.1 Protein Homology CDS 145303 146433 . - 0 ID=cds-WP_003409518.1;Parent=gene-AL60_RS17960;Dbxref=GenBank:WP_003409518.1;Name=WP_003409518.1;Ontology_term=GO:0010181,GO:0018580;gbkey=CDS;go_function=FMN binding|0010181||IEA,nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216410.1;locus_tag=AL60_RS17960;product=nitronate monooxygenase;protein_id=WP_003409518.1;transl_table=11 NZ_KK316852.1 RefSeq gene 146481 146654 . - . ID=gene-AL60_RS27175;Name=AL60_RS27175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27175 NZ_KK316852.1 Protein Homology CDS 146481 146654 . - 0 ID=cds-WP_015456321.1;Parent=gene-AL60_RS27175;Dbxref=GenBank:WP_015456321.1;Name=WP_015456321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015456321.1;locus_tag=AL60_RS27175;product=hypothetical protein;protein_id=WP_015456321.1;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 147085 148047 . + . ID=gene-AL60_RS17965;Name=AL60_RS17965;end_range=148047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS17965;old_locus_tag=AL60_02530;partial=true;pseudo=true NZ_KK316852.1 Protein Homology CDS 147085 148047 . + 0 ID=cds-AL60_RS17965;Parent=gene-AL60_RS17965;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=148047,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012335.6;locus_tag=AL60_RS17965;partial=true;product=alcohol dehydrogenase family protein;pseudo=true;transl_table=11 NZ_KK316852.1 RefSeq gene 148099 149010 . - . ID=gene-AL60_RS17970;Name=AL60_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17970;old_locus_tag=AL60_02531 NZ_KK316852.1 Protein Homology CDS 148099 149010 . - 0 ID=cds-WP_003409526.1;Parent=gene-AL60_RS17970;Dbxref=GenBank:WP_003409526.1;Name=WP_003409526.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216412.1;locus_tag=AL60_RS17970;product=class I SAM-dependent methyltransferase;protein_id=WP_003409526.1;transl_table=11 NZ_KK316852.1 RefSeq gene 149015 149446 . - . ID=gene-AL60_RS17975;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=AL60_RS17975;old_locus_tag=AL60_02532 NZ_KK316852.1 Protein Homology CDS 149015 149446 . - 0 ID=cds-WP_003409533.1;Parent=gene-AL60_RS17975;Dbxref=GenBank:WP_003409533.1;Name=WP_003409533.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216413.1;locus_tag=AL60_RS17975;product=D-aminoacyl-tRNA deacylase;protein_id=WP_003409533.1;transl_table=11 NZ_KK316852.1 RefSeq gene 149504 149812 . + . ID=gene-AL60_RS17980;Name=AL60_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS17980;old_locus_tag=AL60_02533 NZ_KK316852.1 Protein Homology CDS 149504 149812 . + 0 ID=cds-WP_003409536.1;Parent=gene-AL60_RS17980;Dbxref=GenBank:WP_003409536.1;Name=WP_003409536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216414.1;locus_tag=AL60_RS17980;product=MTH1187 family thiamine-binding protein;protein_id=WP_003409536.1;transl_table=11 NZ_KK316852.1 RefSeq gene 149778 150293 . - . ID=gene-AL60_RS27180;Name=AL60_RS27180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27180;old_locus_tag=AL60_02534 NZ_KK316852.1 Protein Homology CDS 149778 150293 . - 0 ID=cds-WP_003409537.1;Parent=gene-AL60_RS27180;Dbxref=GenBank:WP_003409537.1;Name=WP_003409537.1;Ontology_term=GO:0072570;gbkey=CDS;go_function=ADP-D-ribose binding|0072570||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303272.1;locus_tag=AL60_RS27180;product=macro domain-containing protein;protein_id=WP_003409537.1;transl_table=11 NZ_KK316852.1 RefSeq gene 150534 150857 . + . ID=gene-AL60_RS27185;Name=AL60_RS27185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27185 NZ_KK316852.1 GeneMarkS-2+ CDS 150534 150857 . + 0 ID=cds-WP_128882532.1;Parent=gene-AL60_RS27185;Dbxref=GenBank:WP_128882532.1;Name=WP_128882532.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS27185;product=hypothetical protein;protein_id=WP_128882532.1;transl_table=11 NZ_KK316852.1 RefSeq gene 150854 152242 . - . ID=gene-AL60_RS17990;Name=lipJ;gbkey=Gene;gene=lipJ;gene_biotype=protein_coding;locus_tag=AL60_RS17990;old_locus_tag=AL60_02535 NZ_KK316852.1 Protein Homology CDS 150854 152242 . - 0 ID=cds-WP_003409539.1;Parent=gene-AL60_RS17990;Dbxref=GenBank:WP_003409539.1;Name=WP_003409539.1;Ontology_term=GO:0009190,GO:0035556,GO:0009975,GO:0016849,GO:0032555,GO:0046872;gbkey=CDS;gene=lipJ;go_function=cyclase activity|0009975||IEA,phosphorus-oxygen lyase activity|0016849||IEA,purine ribonucleotide binding|0032555||IEA,metal ion binding|0046872||IEA;go_process=cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216416.1;locus_tag=AL60_RS17990;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003409539.1;transl_table=11 NZ_KK316852.1 RefSeq gene 152271 153563 . + . ID=gene-AL60_RS17995;Name=cinA;gbkey=Gene;gene=cinA;gene_biotype=protein_coding;locus_tag=AL60_RS17995;old_locus_tag=AL60_02536 NZ_KK316852.1 Protein Homology CDS 152271 153563 . + 0 ID=cds-WP_003900426.1;Parent=gene-AL60_RS17995;Dbxref=GenBank:WP_003900426.1;Name=WP_003900426.1;gbkey=CDS;gene=cinA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216417.1;locus_tag=AL60_RS17995;product=competence/damage-inducible protein A;protein_id=WP_003900426.1;transl_table=11 NZ_KK316852.1 RefSeq gene 153615 154883 . - . ID=gene-AL60_RS18000;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=AL60_RS18000;old_locus_tag=AL60_02537 NZ_KK316852.1 Protein Homology CDS 153615 154883 . - 0 ID=cds-WP_003900427.1;Parent=gene-AL60_RS18000;Dbxref=GenBank:WP_003900427.1;Name=WP_003900427.1;Ontology_term=GO:0015718,GO:0008028,GO:0005886;gbkey=CDS;gene=nanT;go_component=plasma membrane|0005886||IEA;go_function=monocarboxylic acid transmembrane transporter activity|0008028||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216418.1;locus_tag=AL60_RS18000;product=sialate:H+ symport family MFS transporter;protein_id=WP_003900427.1;transl_table=11 NZ_KK316852.1 RefSeq gene 154973 155377 . + . ID=gene-AL60_RS18005;Name=AL60_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18005;old_locus_tag=AL60_02538 NZ_KK316852.1 Protein Homology CDS 154973 155377 . + 0 ID=cds-WP_003409542.1;Parent=gene-AL60_RS18005;Dbxref=GenBank:WP_003409542.1;Name=WP_003409542.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216419.1;locus_tag=AL60_RS18005;product=phage holin family protein;protein_id=WP_003409542.1;transl_table=11 NZ_KK316852.1 RefSeq gene 155563 155994 . + . ID=gene-AL60_RS18010;Name=AL60_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18010;old_locus_tag=AL60_02539 NZ_KK316852.1 Protein Homology CDS 155563 155994 . + 0 ID=cds-WP_003409543.1;Parent=gene-AL60_RS18010;Dbxref=GenBank:WP_003409543.1;Name=WP_003409543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216420.1;locus_tag=AL60_RS18010;product=anti-sigma factor antagonist;protein_id=WP_003409543.1;transl_table=11 NZ_KK316852.1 RefSeq gene 156042 157004 . - . ID=gene-AL60_RS18015;Name=aao;gbkey=Gene;gene=aao;gene_biotype=protein_coding;locus_tag=AL60_RS18015;old_locus_tag=AL60_02540 NZ_KK316852.1 Protein Homology CDS 156042 157004 . - 0 ID=cds-WP_003899072.1;Parent=gene-AL60_RS18015;Dbxref=GenBank:WP_003899072.1;Name=WP_003899072.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=aao;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216421.1;locus_tag=AL60_RS18015;product=FAD-dependent oxidoreductase;protein_id=WP_003899072.1;transl_table=11 NZ_KK316852.1 RefSeq gene 157034 157504 . - . ID=gene-AL60_RS18020;Name=AL60_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18020;old_locus_tag=AL60_02541 NZ_KK316852.1 Protein Homology CDS 157034 157504 . - 0 ID=cds-WP_003900428.1;Parent=gene-AL60_RS18020;Dbxref=GenBank:WP_003900428.1;Name=WP_003900428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216422.1;locus_tag=AL60_RS18020;product=hypothetical protein;protein_id=WP_003900428.1;transl_table=11 NZ_KK316852.1 RefSeq gene 157844 158308 . - . ID=gene-AL60_RS18025;Name=AL60_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18025;old_locus_tag=AL60_02542 NZ_KK316852.1 Protein Homology CDS 157844 158308 . - 0 ID=cds-WP_014585239.1;Parent=gene-AL60_RS18025;Dbxref=GenBank:WP_014585239.1;Name=WP_014585239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585239.1;locus_tag=AL60_RS18025;product=DUF4262 domain-containing protein;protein_id=WP_014585239.1;transl_table=11 NZ_KK316852.1 RefSeq gene 158498 160720 . - . ID=gene-AL60_RS18030;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=AL60_RS18030;old_locus_tag=AL60_02543 NZ_KK316852.1 Protein Homology CDS 158498 160720 . - 0 ID=cds-WP_003899075.1;Parent=gene-AL60_RS18030;Dbxref=GenBank:WP_003899075.1;Name=WP_003899075.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216424.1;locus_tag=AL60_RS18030;product=catalase/peroxidase HPI;protein_id=WP_003899075.1;transl_table=11 NZ_KK316852.1 RefSeq gene 160758 161201 . - . ID=gene-AL60_RS18035;Name=furA;gbkey=Gene;gene=furA;gene_biotype=protein_coding;locus_tag=AL60_RS18035;old_locus_tag=AL60_02544 NZ_KK316852.1 Protein Homology CDS 160758 161201 . - 0 ID=cds-WP_003899076.1;Parent=gene-AL60_RS18035;Dbxref=GenBank:WP_003899076.1;Name=WP_003899076.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;gene=furA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216425.2;locus_tag=AL60_RS18035;product=Fur family transcriptional regulator;protein_id=WP_003899076.1;transl_table=11 NZ_KK316852.1 RefSeq gene 161315 161908 . - . ID=gene-AL60_RS18040;Name=AL60_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18040;old_locus_tag=AL60_02545 NZ_KK316852.1 Protein Homology CDS 161315 161908 . - 0 ID=cds-WP_003409566.1;Parent=gene-AL60_RS18040;Dbxref=GenBank:WP_003409566.1;Name=WP_003409566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216426.1;locus_tag=AL60_RS18040;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_003409566.1;transl_table=11 NZ_KK316852.1 RefSeq gene 161991 162596 . - . ID=gene-AL60_RS18045;Name=lppC;gbkey=Gene;gene=lppC;gene_biotype=protein_coding;locus_tag=AL60_RS18045;old_locus_tag=AL60_02546 NZ_KK316852.1 Protein Homology CDS 161991 162596 . - 0 ID=cds-WP_003409568.1;Parent=gene-AL60_RS18045;Dbxref=GenBank:WP_003409568.1;Name=WP_003409568.1;gbkey=CDS;gene=lppC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216427.1;locus_tag=AL60_RS18045;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_003409568.1;transl_table=11 NZ_KK316852.1 RefSeq gene 162696 163700 . - . ID=gene-AL60_RS18050;Name=AL60_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18050;old_locus_tag=AL60_02547 NZ_KK316852.1 Protein Homology CDS 162696 163700 . - 0 ID=cds-WP_003899079.1;Parent=gene-AL60_RS18050;Dbxref=GenBank:WP_003899079.1;Name=WP_003899079.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216428.1;locus_tag=AL60_RS18050;product=synaptic vesicle VAT-1 family membrane protein;protein_id=WP_003899079.1;transl_table=11 NZ_KK316852.1 RefSeq gene 163800 164552 . + . ID=gene-AL60_RS18055;Name=AL60_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18055;old_locus_tag=AL60_02548 NZ_KK316852.1 Protein Homology CDS 163800 164552 . + 0 ID=cds-WP_003409574.1;Parent=gene-AL60_RS18055;Dbxref=GenBank:WP_003409574.1;Name=WP_003409574.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216429.1;locus_tag=AL60_RS18055;product=MBL fold metallo-hydrolase;protein_id=WP_003409574.1;transl_table=11 NZ_KK316852.1 RefSeq gene 164530 164937 . - . ID=gene-AL60_RS18060;Name=AL60_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18060;old_locus_tag=AL60_02549 NZ_KK316852.1 Protein Homology CDS 164530 164937 . - 0 ID=cds-WP_003409577.1;Parent=gene-AL60_RS18060;Dbxref=GenBank:WP_003409577.1;Name=WP_003409577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216430.1;locus_tag=AL60_RS18060;product=hypothetical protein;protein_id=WP_003409577.1;transl_table=11 NZ_KK316852.1 RefSeq gene 165072 166175 . + . ID=gene-AL60_RS18065;Name=aceAa;gbkey=Gene;gene=aceAa;gene_biotype=protein_coding;locus_tag=AL60_RS18065;old_locus_tag=AL60_02550 NZ_KK316852.1 Protein Homology CDS 165072 166175 . + 0 ID=cds-WP_003906697.1;Parent=gene-AL60_RS18065;Dbxref=GenBank:WP_003906697.1;Name=WP_003906697.1;gbkey=CDS;gene=aceAa;inference=COORDINATES: protein motif:HMM:NF012676.6;locus_tag=AL60_RS18065;product=isocitrate lyase/phosphoenolpyruvate mutase family protein;protein_id=WP_003906697.1;transl_table=11 NZ_KK316852.1 RefSeq gene 166175 167371 . + . ID=gene-AL60_RS18070;Name=aceAb;gbkey=Gene;gene=aceAb;gene_biotype=protein_coding;locus_tag=AL60_RS18070;old_locus_tag=AL60_02551 NZ_KK316852.1 Protein Homology CDS 166175 167371 . + 0 ID=cds-WP_003903680.1;Parent=gene-AL60_RS18070;Dbxref=GenBank:WP_003903680.1;Name=WP_003903680.1;gbkey=CDS;gene=aceAb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903680.1;locus_tag=AL60_RS18070;product=isocitrate lyase ICL2 subunit AceAb;protein_id=WP_003903680.1;transl_table=11 NZ_KK316852.1 RefSeq gene 167541 171920 . - . ID=gene-AL60_RS18075;Name=AL60_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18075;old_locus_tag=AL60_02552 NZ_KK316852.1 Protein Homology CDS 167541 171920 . - 0 ID=cds-WP_023641923.1;Parent=gene-AL60_RS18075;Dbxref=GenBank:WP_023641923.1;Name=WP_023641923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177655.1;locus_tag=AL60_RS18075;product=PPE family protein;protein_id=WP_023641923.1;transl_table=11 NZ_KK316852.1 RefSeq gene 172258 175221 . - . ID=gene-AL60_RS18080;Name=AL60_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18080;old_locus_tag=AL60_02553 NZ_KK316852.1 Protein Homology CDS 172258 175221 . - 0 ID=cds-WP_003906700.1;Parent=gene-AL60_RS18080;Dbxref=GenBank:WP_003906700.1;Name=WP_003906700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177850.1;locus_tag=AL60_RS18080;product=PPE family protein;protein_id=WP_003906700.1;transl_table=11 NZ_KK316852.1 RefSeq gene 175670 176134 . - . ID=gene-AL60_RS18085;Name=AL60_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18085;old_locus_tag=AL60_02554 NZ_KK316852.1 Protein Homology CDS 175670 176134 . - 0 ID=cds-WP_003899082.1;Parent=gene-AL60_RS18085;Dbxref=GenBank:WP_003899082.1;Name=WP_003899082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216435.1;locus_tag=AL60_RS18085;product=SRPBCC family protein;protein_id=WP_003899082.1;transl_table=11 NZ_KK316852.1 RefSeq gene 176232 177095 . + . ID=gene-AL60_RS18090;Name=AL60_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18090;old_locus_tag=AL60_02555 NZ_KK316852.1 Protein Homology CDS 176232 177095 . + 0 ID=cds-WP_003900432.1;Parent=gene-AL60_RS18090;Dbxref=GenBank:WP_003900432.1;Name=WP_003900432.1;Ontology_term=GO:0006644,GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid metabolic process|0006644||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216436.1;locus_tag=AL60_RS18090;product=lysophospholipid acyltransferase family protein;protein_id=WP_003900432.1;transl_table=11 NZ_KK316852.1 RefSeq gene 177133 178404 . - . ID=gene-AL60_RS18095;Name=lppF;gbkey=Gene;gene=lppF;gene_biotype=protein_coding;locus_tag=AL60_RS18095;old_locus_tag=AL60_02556 NZ_KK316852.1 Protein Homology CDS 177133 178404 . - 0 ID=cds-WP_003409666.1;Parent=gene-AL60_RS18095;Dbxref=GenBank:WP_003409666.1;Name=WP_003409666.1;gbkey=CDS;gene=lppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216437.1;locus_tag=AL60_RS18095;product=haloacid dehalogenase-like hydrolase;protein_id=WP_003409666.1;transl_table=11 NZ_KK316852.1 RefSeq gene 178676 179791 . + . ID=gene-AL60_RS18100;Name=AL60_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18100;old_locus_tag=AL60_02557 NZ_KK316852.1 Protein Homology CDS 178676 179791 . + 0 ID=cds-WP_003409667.1;Parent=gene-AL60_RS18100;Dbxref=GenBank:WP_003409667.1;Name=WP_003409667.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216438.1;locus_tag=AL60_RS18100;product=serine hydrolase domain-containing protein;protein_id=WP_003409667.1;transl_table=11 NZ_KK316852.1 RefSeq gene 179842 181122 . + . ID=gene-AL60_RS18105;Name=lipD;gbkey=Gene;gene=lipD;gene_biotype=protein_coding;locus_tag=AL60_RS18105;old_locus_tag=AL60_02558 NZ_KK316852.1 Protein Homology CDS 179842 181122 . + 0 ID=cds-WP_003911710.1;Parent=gene-AL60_RS18105;Dbxref=GenBank:WP_003911710.1;Name=WP_003911710.1;gbkey=CDS;gene=lipD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911710.1;locus_tag=AL60_RS18105;product=lipase LipD;protein_id=WP_003911710.1;transl_table=11 NZ_KK316852.1 RefSeq gene 181159 181539 . - . ID=gene-AL60_RS18110;Name=AL60_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18110;old_locus_tag=AL60_02559 NZ_KK316852.1 Protein Homology CDS 181159 181539 . - 0 ID=cds-WP_003900434.1;Parent=gene-AL60_RS18110;Dbxref=GenBank:WP_003900434.1;Name=WP_003900434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216440.1;locus_tag=AL60_RS18110;product=hypothetical protein;protein_id=WP_003900434.1;transl_table=11 NZ_KK316852.1 RefSeq gene 181696 183558 . + . ID=gene-AL60_RS18115;Name=fadD31;gbkey=Gene;gene=fadD31;gene_biotype=protein_coding;gene_synonym=faaL31;locus_tag=AL60_RS18115;old_locus_tag=AL60_02560 NZ_KK316852.1 Protein Homology CDS 181696 183558 . + 0 ID=cds-WP_003409680.1;Parent=gene-AL60_RS18115;Dbxref=GenBank:WP_003409680.1;Name=WP_003409680.1;gbkey=CDS;gene=fadD31;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216441.2;locus_tag=AL60_RS18115;product=fatty-acid--AMP ligase FAAL31/FadD31;protein_id=WP_003409680.1;transl_table=11 NZ_KK316852.1 RefSeq gene 183566 184045 . - . ID=gene-AL60_RS18120;Name=mpt63;gbkey=Gene;gene=mpt63;gene_biotype=protein_coding;locus_tag=AL60_RS18120;old_locus_tag=AL60_02561 NZ_KK316852.1 Protein Homology CDS 183566 184045 . - 0 ID=cds-WP_003409684.1;Parent=gene-AL60_RS18120;Dbxref=GenBank:WP_003409684.1;Name=WP_003409684.1;gbkey=CDS;gene=mpt63;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216442.1;locus_tag=AL60_RS18120;product=immunoprotective protein Mpt63;protein_id=WP_003409684.1;transl_table=11 NZ_KK316852.1 RefSeq gene 184282 185055 . + . ID=gene-AL60_RS18125;Name=AL60_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18125;old_locus_tag=AL60_02562 NZ_KK316852.1 Protein Homology CDS 184282 185055 . + 0 ID=cds-WP_003409685.1;Parent=gene-AL60_RS18125;Dbxref=GenBank:WP_003409685.1;Name=WP_003409685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216443.1;locus_tag=AL60_RS18125;product=YqjF family protein;protein_id=WP_003409685.1;transl_table=11 NZ_KK316852.1 RefSeq gene 185059 185826 . - . ID=gene-AL60_RS18130;Name=AL60_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18130;old_locus_tag=AL60_02563 NZ_KK316852.1 Protein Homology CDS 185059 185826 . - 0 ID=cds-WP_003409686.1;Parent=gene-AL60_RS18130;Dbxref=GenBank:WP_003409686.1;Name=WP_003409686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216444.1;locus_tag=AL60_RS18130;product=SDR family oxidoreductase;protein_id=WP_003409686.1;transl_table=11 NZ_KK316852.1 RefSeq gene 185871 186515 . - . ID=gene-AL60_RS18135;Name=AL60_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18135;old_locus_tag=AL60_02564 NZ_KK316852.1 Protein Homology CDS 185871 186515 . - 0 ID=cds-WP_003409689.1;Parent=gene-AL60_RS18135;Dbxref=GenBank:WP_003409689.1;Name=WP_003409689.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216445.1;locus_tag=AL60_RS18135;product=TIGR03085 family metal-binding protein;protein_id=WP_003409689.1;transl_table=11 NZ_KK316852.1 RefSeq gene 186527 187051 . - . ID=gene-AL60_RS18140;Name=AL60_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18140;old_locus_tag=AL60_02565 NZ_KK316852.1 Protein Homology CDS 186527 187051 . - 0 ID=cds-WP_003409694.1;Parent=gene-AL60_RS18140;Dbxref=GenBank:WP_003409694.1;Name=WP_003409694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216446.1;locus_tag=AL60_RS18140;product=type 1 glutamine amidotransferase family protein;protein_id=WP_003409694.1;transl_table=11 NZ_KK316852.1 RefSeq gene 187069 187848 . - . ID=gene-AL60_RS18145;Name=AL60_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18145;old_locus_tag=AL60_02566 NZ_KK316852.1 Protein Homology CDS 187069 187848 . - 0 ID=cds-WP_003899087.1;Parent=gene-AL60_RS18145;Dbxref=GenBank:WP_003899087.1;Name=WP_003899087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899087.1;locus_tag=AL60_RS18145;product=HTH-type transcriptional regulator;protein_id=WP_003899087.1;transl_table=11 NZ_KK316852.1 RefSeq gene 187981 188478 . + . ID=gene-AL60_RS18150;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AL60_RS18150;old_locus_tag=AL60_02567 NZ_KK316852.1 Protein Homology CDS 187981 188478 . + 0 ID=cds-WP_003409700.1;Parent=gene-AL60_RS18150;Dbxref=GenBank:WP_003409700.1;Name=WP_003409700.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216448.1;locus_tag=AL60_RS18150;product=thiol peroxidase;protein_id=WP_003409700.1;transl_table=11 NZ_KK316852.1 RefSeq gene 188475 189566 . - . ID=gene-AL60_RS18155;Name=AL60_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18155;old_locus_tag=AL60_02568 NZ_KK316852.1 Protein Homology CDS 188475 189566 . - 0 ID=cds-WP_012054300.1;Parent=gene-AL60_RS18155;Dbxref=GenBank:WP_012054300.1;Name=WP_012054300.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216449.1;locus_tag=AL60_RS18155;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012054300.1;transl_table=11 NZ_KK316852.1 RefSeq gene 189568 190797 . - . ID=gene-AL60_RS18160;Name=AL60_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18160;old_locus_tag=AL60_02569 NZ_KK316852.1 Protein Homology CDS 189568 190797 . - 0 ID=cds-WP_003900438.1;Parent=gene-AL60_RS18160;Dbxref=GenBank:WP_003900438.1;Name=WP_003900438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216450.1;locus_tag=AL60_RS18160;product=acyl-CoA dehydrogenase;protein_id=WP_003900438.1;transl_table=11 NZ_KK316852.1 RefSeq gene 190812 191768 . - . ID=gene-AL60_RS18165;Name=AL60_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18165;old_locus_tag=AL60_02570 NZ_KK316852.1 Protein Homology CDS 190812 191768 . - 0 ID=cds-WP_003409707.1;Parent=gene-AL60_RS18165;Dbxref=GenBank:WP_003409707.1;Name=WP_003409707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216451.1;locus_tag=AL60_RS18165;product=enoyl-CoA hydratase;protein_id=WP_003409707.1;transl_table=11 NZ_KK316852.1 RefSeq gene 191993 193102 . + . ID=gene-AL60_RS18170;Name=AL60_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18170;old_locus_tag=AL60_02571 NZ_KK316852.1 Protein Homology CDS 191993 193102 . + 0 ID=cds-WP_003904740.1;Parent=gene-AL60_RS18170;Dbxref=GenBank:WP_003904740.1;Name=WP_003904740.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216452.1;locus_tag=AL60_RS18170;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_003904740.1;transl_table=11 NZ_KK316852.1 RefSeq gene 193105 195624 . + . ID=gene-AL60_RS18175;Name=AL60_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18175;old_locus_tag=AL60_02572 NZ_KK316852.1 Protein Homology CDS 193105 195624 . + 0 ID=cds-WP_003409714.1;Parent=gene-AL60_RS18175;Dbxref=GenBank:WP_003409714.1;Name=WP_003409714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216453.1;locus_tag=AL60_RS18175;product=FAD-binding oxidoreductase;protein_id=WP_003409714.1;transl_table=11 NZ_KK316852.1 RefSeq gene 195636 196706 . + . ID=gene-AL60_RS18180;Name=ephB;gbkey=Gene;gene=ephB;gene_biotype=protein_coding;locus_tag=AL60_RS18180;old_locus_tag=AL60_02573 NZ_KK316852.1 Protein Homology CDS 195636 196706 . + 0 ID=cds-WP_003899091.1;Parent=gene-AL60_RS18180;Dbxref=GenBank:WP_003899091.1;Name=WP_003899091.1;gbkey=CDS;gene=ephB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216454.1;locus_tag=AL60_RS18180;product=epoxide hydrolase EphB;protein_id=WP_003899091.1;transl_table=11 NZ_KK316852.1 RefSeq gene 196703 197218 . + . ID=gene-AL60_RS18185;Name=AL60_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18185;old_locus_tag=AL60_02574 NZ_KK316852.1 Protein Homology CDS 196703 197218 . + 0 ID=cds-WP_012054301.1;Parent=gene-AL60_RS18185;Dbxref=GenBank:WP_012054301.1;Name=WP_012054301.1;Ontology_term=GO:0010181,GO:0016491,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216455.1;locus_tag=AL60_RS18185;product=flavin reductase family protein;protein_id=WP_012054301.1;transl_table=11 NZ_KK316852.1 RefSeq gene 197215 198276 . + . ID=gene-AL60_RS18190;Name=AL60_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18190;old_locus_tag=AL60_02575 NZ_KK316852.1 Protein Homology CDS 197215 198276 . + 0 ID=cds-WP_003899092.1;Parent=gene-AL60_RS18190;Dbxref=GenBank:WP_003899092.1;Name=WP_003899092.1;Ontology_term=GO:0008686;gbkey=CDS;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177851.1;locus_tag=AL60_RS18190;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_003899092.1;transl_table=11 NZ_KK316852.1 RefSeq gene 198273 199043 . + . ID=gene-AL60_RS18195;Name=AL60_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18195;old_locus_tag=AL60_02576 NZ_KK316852.1 Protein Homology CDS 198273 199043 . + 0 ID=cds-WP_003409775.1;Parent=gene-AL60_RS18195;Dbxref=GenBank:WP_003409775.1;Name=WP_003409775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216457.1;locus_tag=AL60_RS18195;product=SDR family oxidoreductase;protein_id=WP_003409775.1;transl_table=11 NZ_KK316852.1 RefSeq gene 199253 199582 . - . ID=gene-AL60_RS18200;Name=AL60_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18200;old_locus_tag=AL60_02577 NZ_KK316852.1 Protein Homology CDS 199253 199582 . - 0 ID=cds-WP_003409778.1;Parent=gene-AL60_RS18200;Dbxref=GenBank:WP_003409778.1;Name=WP_003409778.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216458.1;locus_tag=AL60_RS18200;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_003409778.1;transl_table=11 NZ_KK316852.1 RefSeq gene 199579 199956 . - . ID=gene-AL60_RS26160;Name=mazE5;gbkey=Gene;gene=mazE5;gene_biotype=protein_coding;locus_tag=AL60_RS26160;old_locus_tag=AL60_02578 NZ_KK316852.1 Protein Homology CDS 199579 199956 . - 0 ID=cds-WP_003409780.1;Parent=gene-AL60_RS26160;Dbxref=GenBank:WP_003409780.1;Name=WP_003409780.1;gbkey=CDS;gene=mazE5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216459.1;locus_tag=AL60_RS26160;product=type II toxin-antitoxin system antitoxin MazE5;protein_id=WP_003409780.1;transl_table=11 NZ_KK316852.1 RefSeq gene 199953 200543 . - . ID=gene-AL60_RS18205;Name=AL60_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18205;old_locus_tag=AL60_02579 NZ_KK316852.1 Protein Homology CDS 199953 200543 . - 0 ID=cds-WP_003409784.1;Parent=gene-AL60_RS18205;Dbxref=GenBank:WP_003409784.1;Name=WP_003409784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216460.1;locus_tag=AL60_RS18205;product=SEC-C domain-containing protein;protein_id=WP_003409784.1;transl_table=11 NZ_KK316852.1 RefSeq gene 200598 201962 . + . ID=gene-AL60_RS18210;Name=AL60_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18210;old_locus_tag=AL60_02580 NZ_KK316852.1 Protein Homology CDS 200598 201962 . + 0 ID=cds-WP_012054302.1;Parent=gene-AL60_RS18210;Dbxref=GenBank:WP_012054302.1;Name=WP_012054302.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216461.1;locus_tag=AL60_RS18210;product=HNH endonuclease signature motif containing protein;protein_id=WP_012054302.1;transl_table=11 NZ_KK316852.1 RefSeq gene 202117 202569 . - . ID=gene-AL60_RS18215;Name=lppG;gbkey=Gene;gene=lppG;gene_biotype=protein_coding;locus_tag=AL60_RS18215;old_locus_tag=AL60_02581 NZ_KK316852.1 Protein Homology CDS 202117 202569 . - 0 ID=cds-WP_003899095.1;Parent=gene-AL60_RS18215;Dbxref=GenBank:WP_003899095.1;Name=WP_003899095.1;gbkey=CDS;gene=lppG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216462.1;locus_tag=AL60_RS18215;product=lipoprotein;protein_id=WP_003899095.1;transl_table=11 NZ_KK316852.1 RefSeq gene 202633 203034 . + . ID=gene-AL60_RS18220;Name=AL60_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18220;old_locus_tag=AL60_02582 NZ_KK316852.1 Protein Homology CDS 202633 203034 . + 0 ID=cds-WP_003409869.1;Parent=gene-AL60_RS18220;Dbxref=GenBank:WP_003409869.1;Name=WP_003409869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216463.1;locus_tag=AL60_RS18220;product=hypothetical protein;protein_id=WP_003409869.1;transl_table=11 NZ_KK316852.1 RefSeq gene 203027 203209 . - . ID=gene-AL60_RS0105010;Name=AL60_RS0105010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105010 NZ_KK316852.1 Protein Homology CDS 203027 203209 . - 0 ID=cds-WP_003409870.1;Parent=gene-AL60_RS0105010;Dbxref=GenBank:WP_003409870.1;Name=WP_003409870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409870.1;locus_tag=AL60_RS0105010;product=hypothetical protein;protein_id=WP_003409870.1;transl_table=11 NZ_KK316852.1 RefSeq gene 203323 203673 . - . ID=gene-AL60_RS18225;Name=AL60_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18225;old_locus_tag=AL60_02583 NZ_KK316852.1 Protein Homology CDS 203323 203673 . - 0 ID=cds-WP_003899096.1;Parent=gene-AL60_RS18225;Dbxref=GenBank:WP_003899096.1;Name=WP_003899096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216464.1;locus_tag=AL60_RS18225;product=hypothetical protein;protein_id=WP_003899096.1;transl_table=11 NZ_KK316852.1 RefSeq gene 203684 204586 . - . ID=gene-AL60_RS18230;Name=AL60_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18230;old_locus_tag=AL60_02584 NZ_KK316852.1 Protein Homology CDS 203684 204586 . - 0 ID=cds-WP_003899097.1;Parent=gene-AL60_RS18230;Dbxref=GenBank:WP_003899097.1;Name=WP_003899097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409874.1;locus_tag=AL60_RS18230;product=hypothetical protein;protein_id=WP_003899097.1;transl_table=11 NZ_KK316852.1 RefSeq gene 204607 204798 . - . ID=gene-AL60_RS18235;Name=AL60_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18235;old_locus_tag=AL60_02585 NZ_KK316852.1 Protein Homology CDS 204607 204798 . - 0 ID=cds-WP_003409876.1;Parent=gene-AL60_RS18235;Dbxref=GenBank:WP_003409876.1;Name=WP_003409876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216466.1;locus_tag=AL60_RS18235;product=hypothetical protein;protein_id=WP_003409876.1;transl_table=11 NZ_KK316852.1 RefSeq gene 204799 205095 . - . ID=gene-AL60_RS18240;Name=AL60_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18240;old_locus_tag=AL60_02586 NZ_KK316852.1 Protein Homology CDS 204799 205095 . - 0 ID=cds-WP_003409877.1;Parent=gene-AL60_RS18240;Dbxref=GenBank:WP_003409877.1;Name=WP_003409877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216467.1;locus_tag=AL60_RS18240;product=hypothetical protein;protein_id=WP_003409877.1;transl_table=11 NZ_KK316852.1 RefSeq gene 205335 205550 . + . ID=gene-AL60_RS18245;Name=AL60_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18245;old_locus_tag=AL60_02587 NZ_KK316852.1 Protein Homology CDS 205335 205550 . + 0 ID=cds-WP_003409878.1;Parent=gene-AL60_RS18245;Dbxref=GenBank:WP_003409878.1;Name=WP_003409878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216468.1;locus_tag=AL60_RS18245;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_003409878.1;transl_table=11 NZ_KK316852.1 RefSeq gene 205547 205858 . + . ID=gene-AL60_RS18250;Name=AL60_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18250;old_locus_tag=AL60_02588 NZ_KK316852.1 GeneMarkS-2+ CDS 205547 205858 . + 0 ID=cds-WP_003409881.1;Parent=gene-AL60_RS18250;Dbxref=GenBank:WP_003409881.1;Name=WP_003409881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS18250;product=PIN domain-containing protein;protein_id=WP_003409881.1;transl_table=11 NZ_KK316852.1 RefSeq gene 205832 206353 . - . ID=gene-AL60_RS27190;Name=AL60_RS27190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27190;old_locus_tag=AL60_02589 NZ_KK316852.1 Protein Homology CDS 205832 206353 . - 0 ID=cds-WP_003904745.1;Parent=gene-AL60_RS27190;Dbxref=GenBank:WP_003904745.1;Name=WP_003904745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216470.1;locus_tag=AL60_RS27190;product=hypothetical protein;protein_id=WP_003904745.1;transl_table=11 NZ_KK316852.1 RefSeq gene 206328 206705 . + . ID=gene-AL60_RS18255;Name=higB;gbkey=Gene;gene=higB;gene_biotype=protein_coding;locus_tag=AL60_RS18255;old_locus_tag=AL60_02591 NZ_KK316852.1 Protein Homology CDS 206328 206705 . + 0 ID=cds-WP_010886136.1;Parent=gene-AL60_RS18255;Dbxref=GenBank:WP_010886136.1;Name=WP_010886136.1;gbkey=CDS;gene=higB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216471.2;locus_tag=AL60_RS18255;product=type II toxin-antitoxin system toxin HigB;protein_id=WP_010886136.1;transl_table=11 NZ_KK316852.1 RefSeq gene 206747 207196 . + . ID=gene-AL60_RS18260;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=AL60_RS18260;old_locus_tag=AL60_02592 NZ_KK316852.1 Protein Homology CDS 206747 207196 . + 0 ID=cds-WP_003409886.1;Parent=gene-AL60_RS18260;Dbxref=GenBank:WP_003409886.1;Name=WP_003409886.1;gbkey=CDS;gene=higA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216472.1;locus_tag=AL60_RS18260;product=type II toxin-antitoxin system antitoxin HigA;protein_id=WP_003409886.1;transl_table=11 NZ_KK316852.1 RefSeq gene 207193 207738 . + . ID=gene-AL60_RS18265;Name=AL60_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18265;old_locus_tag=AL60_02593 NZ_KK316852.1 Protein Homology CDS 207193 207738 . + 0 ID=cds-WP_003409891.1;Parent=gene-AL60_RS18265;Dbxref=GenBank:WP_003409891.1;Name=WP_003409891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216473.1;locus_tag=AL60_RS18265;product=SecB-like chaperone SecBL;protein_id=WP_003409891.1;transl_table=11 NZ_KK316852.1 RefSeq gene 207627 208241 . - . ID=gene-AL60_RS18270;Name=AL60_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18270;old_locus_tag=AL60_02594 NZ_KK316852.1 Protein Homology CDS 207627 208241 . - 0 ID=cds-WP_003901296.1;Parent=gene-AL60_RS18270;Dbxref=GenBank:WP_003901296.1;Name=WP_003901296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216474.1;locus_tag=AL60_RS18270;product=hypothetical protein;protein_id=WP_003901296.1;transl_table=11 NZ_KK316852.1 RefSeq gene 208290 208586 . - . ID=gene-AL60_RS18275;Name=AL60_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18275;old_locus_tag=AL60_02595 NZ_KK316852.1 Protein Homology CDS 208290 208586 . - 0 ID=cds-WP_003409896.1;Parent=gene-AL60_RS18275;Dbxref=GenBank:WP_003409896.1;Name=WP_003409896.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216475.1;locus_tag=AL60_RS18275;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003409896.1;transl_table=11 NZ_KK316852.1 RefSeq gene 208583 208834 . - . ID=gene-AL60_RS18280;Name=AL60_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18280;old_locus_tag=AL60_02596 NZ_KK316852.1 Protein Homology CDS 208583 208834 . - 0 ID=cds-WP_003409899.1;Parent=gene-AL60_RS18280;Dbxref=GenBank:WP_003409899.1;Name=WP_003409899.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216476.1;locus_tag=AL60_RS18280;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_003409899.1;transl_table=11 NZ_KK316852.1 RefSeq gene 208821 209315 . + . ID=gene-AL60_RS18285;Name=AL60_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18285;old_locus_tag=AL60_02597 NZ_KK316852.1 Protein Homology CDS 208821 209315 . + 0 ID=cds-WP_003899099.1;Parent=gene-AL60_RS18285;Dbxref=GenBank:WP_003899099.1;Name=WP_003899099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216477.1;locus_tag=AL60_RS18285;product=hypothetical protein;protein_id=WP_003899099.1;transl_table=11 NZ_KK316852.1 RefSeq gene 209475 209882 . - . ID=gene-AL60_RS18290;Name=AL60_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18290;old_locus_tag=AL60_02598 NZ_KK316852.1 Protein Homology CDS 209475 209882 . - 0 ID=cds-WP_003409913.1;Parent=gene-AL60_RS18290;Dbxref=GenBank:WP_003409913.1;Name=WP_003409913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216478.1;locus_tag=AL60_RS18290;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003409913.1;transl_table=11 NZ_KK316852.1 RefSeq gene 209886 210158 . - . ID=gene-AL60_RS18295;Name=AL60_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18295;old_locus_tag=AL60_02599 NZ_KK316852.1 Protein Homology CDS 209886 210158 . - 0 ID=cds-WP_003899100.1;Parent=gene-AL60_RS18295;Dbxref=GenBank:WP_003899100.1;Name=WP_003899100.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410641.1;locus_tag=AL60_RS18295;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003899100.1;transl_table=11 NZ_KK316852.1 RefSeq gene 210191 211411 . - . ID=gene-AL60_RS18300;Name=mce3R;gbkey=Gene;gene=mce3R;gene_biotype=protein_coding;locus_tag=AL60_RS18300;old_locus_tag=AL60_02600 NZ_KK316852.1 Protein Homology CDS 210191 211411 . - 0 ID=cds-WP_003409919.1;Parent=gene-AL60_RS18300;Dbxref=GenBank:WP_003409919.1;Name=WP_003409919.1;gbkey=CDS;gene=mce3R;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216479.1;locus_tag=AL60_RS18300;product=TetR family transcriptional regulator Mce3R;protein_id=WP_003409919.1;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 212310 213105 . + . ID=gene-AL60_RS0105035;Name=AL60_RS0105035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0105035;pseudo=true NZ_KK316852.1 Protein Homology CDS 212310 213105 . + 0 ID=cds-AL60_RS0105035;Parent=gene-AL60_RS0105035;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216480.1;locus_tag=AL60_RS0105035;product=MlaE family ABC transporter permease;pseudo=true;transl_table=11 NZ_KK316852.1 RefSeq gene 213115 213930 . + . ID=gene-AL60_RS18305;Name=AL60_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18305;old_locus_tag=AL60_02602 NZ_KK316852.1 Protein Homology CDS 213115 213930 . + 0 ID=cds-WP_003899102.1;Parent=gene-AL60_RS18305;Dbxref=GenBank:WP_003899102.1;Name=WP_003899102.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216481.1;locus_tag=AL60_RS18305;product=ABC transporter permease;protein_id=WP_003899102.1;transl_table=11 NZ_KK316852.1 RefSeq gene 213935 215212 . + . ID=gene-AL60_RS18310;Name=AL60_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18310;old_locus_tag=AL60_02603 NZ_KK316852.1 Protein Homology CDS 213935 215212 . + 0 ID=cds-WP_003900443.1;Parent=gene-AL60_RS18310;Dbxref=GenBank:WP_003900443.1;Name=WP_003900443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177852.1;locus_tag=AL60_RS18310;product=MCE family protein;protein_id=WP_003900443.1;transl_table=11 NZ_KK316852.1 RefSeq gene 215209 216237 . + . ID=gene-AL60_RS18315;Name=AL60_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18315;old_locus_tag=AL60_02604 NZ_KK316852.1 Protein Homology CDS 215209 216237 . + 0 ID=cds-WP_003899104.1;Parent=gene-AL60_RS18315;Dbxref=GenBank:WP_003899104.1;Name=WP_003899104.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216483.1;locus_tag=AL60_RS18315;product=virulence factor Mce family protein;protein_id=WP_003899104.1;transl_table=11 NZ_KK316852.1 RefSeq gene 216234 217466 . + . ID=gene-AL60_RS18320;Name=AL60_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18320;old_locus_tag=AL60_02605 NZ_KK316852.1 Protein Homology CDS 216234 217466 . + 0 ID=cds-WP_003904746.1;Parent=gene-AL60_RS18320;Dbxref=GenBank:WP_003904746.1;Name=WP_003904746.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216484.1;locus_tag=AL60_RS18320;product=virulence factor Mce family protein;protein_id=WP_003904746.1;transl_table=11 NZ_KK316852.1 RefSeq gene 217463 218734 . + . ID=gene-AL60_RS18325;Name=AL60_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18325;old_locus_tag=AL60_02606 NZ_KK316852.1 Protein Homology CDS 217463 218734 . + 0 ID=cds-WP_003899106.1;Parent=gene-AL60_RS18325;Dbxref=GenBank:WP_003899106.1;Name=WP_003899106.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216485.1;locus_tag=AL60_RS18325;product=virulence factor Mce family protein;protein_id=WP_003899106.1;transl_table=11 NZ_KK316852.1 RefSeq gene 218731 219864 . + . ID=gene-AL60_RS18330;Name=lprM;gbkey=Gene;gene=lprM;gene_biotype=protein_coding;locus_tag=AL60_RS18330;old_locus_tag=AL60_02607 NZ_KK316852.1 Protein Homology CDS 218731 219864 . + 0 ID=cds-WP_003899107.1;Parent=gene-AL60_RS18330;Dbxref=GenBank:WP_003899107.1;Name=WP_003899107.1;gbkey=CDS;gene=lprM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216486.1;locus_tag=AL60_RS18330;product=Mce family lipoprotein LprM;protein_id=WP_003899107.1;transl_table=11 NZ_KK316852.1 RefSeq gene 219865 221178 . + . ID=gene-AL60_RS18335;Name=AL60_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18335;old_locus_tag=AL60_02608 NZ_KK316852.1 Protein Homology CDS 219865 221178 . + 0 ID=cds-WP_009937691.1;Parent=gene-AL60_RS18335;Dbxref=GenBank:WP_009937691.1;Name=WP_009937691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216487.1;locus_tag=AL60_RS18335;product=MCE family protein;protein_id=WP_009937691.1;transl_table=11 NZ_KK316852.1 RefSeq gene 221200 221775 . + . ID=gene-AL60_RS18340;Name=AL60_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18340;old_locus_tag=AL60_02609 NZ_KK316852.1 Protein Homology CDS 221200 221775 . + 0 ID=cds-WP_003899109.1;Parent=gene-AL60_RS18340;Dbxref=GenBank:WP_003899109.1;Name=WP_003899109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216488.1;locus_tag=AL60_RS18340;product=Mce associated membrane protein;protein_id=WP_003899109.1;transl_table=11 NZ_KK316852.1 RefSeq gene 221772 222254 . + . ID=gene-AL60_RS18345;Name=AL60_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18345;old_locus_tag=AL60_02610 NZ_KK316852.1 Protein Homology CDS 221772 222254 . + 0 ID=cds-WP_003899110.1;Parent=gene-AL60_RS18345;Dbxref=GenBank:WP_003899110.1;Name=WP_003899110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216489.1;locus_tag=AL60_RS18345;product=Mce associated membrane protein;protein_id=WP_003899110.1;transl_table=11 NZ_KK316852.1 RefSeq gene 222267 222644 . + . ID=gene-AL60_RS18350;Name=AL60_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18350;old_locus_tag=AL60_02611 NZ_KK316852.1 Protein Homology CDS 222267 222644 . + 0 ID=cds-WP_003899111.1;Parent=gene-AL60_RS18350;Dbxref=GenBank:WP_003899111.1;Name=WP_003899111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216490.1;locus_tag=AL60_RS18350;product=DUF732 domain-containing protein;protein_id=WP_003899111.1;transl_table=11 NZ_KK316852.1 RefSeq gene 222660 223325 . + . ID=gene-AL60_RS18355;Name=AL60_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18355;old_locus_tag=AL60_02612 NZ_KK316852.1 Protein Homology CDS 222660 223325 . + 0 ID=cds-WP_003899112.1;Parent=gene-AL60_RS18355;Dbxref=GenBank:WP_003899112.1;Name=WP_003899112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216491.1;locus_tag=AL60_RS18355;product=CAP domain-containing protein;protein_id=WP_003899112.1;transl_table=11 NZ_KK316852.1 RefSeq gene 223452 223859 . - . ID=gene-AL60_RS18360;Name=AL60_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18360;old_locus_tag=AL60_02613 NZ_KK316852.1 Protein Homology CDS 223452 223859 . - 0 ID=cds-WP_003899113.1;Parent=gene-AL60_RS18360;Dbxref=GenBank:WP_003899113.1;Name=WP_003899113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216492.1;locus_tag=AL60_RS18360;product=NYN domain-containing protein;protein_id=WP_003899113.1;transl_table=11 NZ_KK316852.1 RefSeq gene 224362 225408 . + . ID=gene-AL60_RS18365;Name=AL60_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18365;old_locus_tag=AL60_02614 NZ_KK316852.1 Protein Homology CDS 224362 225408 . + 0 ID=cds-WP_003899114.1;Parent=gene-AL60_RS18365;Dbxref=GenBank:WP_003899114.1;Name=WP_003899114.1;Ontology_term=GO:0006508,GO:0004222,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216493.1;locus_tag=AL60_RS18365;product=M48 family metallopeptidase;protein_id=WP_003899114.1;transl_table=11 NZ_KK316852.1 RefSeq gene 225516 226364 . + . ID=gene-AL60_RS18370;Name=AL60_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18370;old_locus_tag=AL60_02615 NZ_KK316852.1 Protein Homology CDS 225516 226364 . + 0 ID=cds-WP_003409942.1;Parent=gene-AL60_RS18370;Dbxref=GenBank:WP_003409942.1;Name=WP_003409942.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216494.1;locus_tag=AL60_RS18370;product=class I SAM-dependent methyltransferase;protein_id=WP_003409942.1;transl_table=11 NZ_KK316852.1 RefSeq gene 226327 227772 . - . ID=gene-AL60_RS18375;Name=AL60_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18375;old_locus_tag=AL60_02616 NZ_KK316852.1 Protein Homology CDS 226327 227772 . - 0 ID=cds-WP_003899115.1;Parent=gene-AL60_RS18375;Dbxref=GenBank:WP_003899115.1;Name=WP_003899115.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216495.2;locus_tag=AL60_RS18375;product=APC family permease;protein_id=WP_003899115.1;transl_table=11 NZ_KK316852.1 RefSeq gene 227951 228637 . - . ID=gene-AL60_RS18380;Name=mpt64;gbkey=Gene;gene=mpt64;gene_biotype=protein_coding;locus_tag=AL60_RS18380;old_locus_tag=AL60_02617 NZ_KK316852.1 Protein Homology CDS 227951 228637 . - 0 ID=cds-WP_003409954.1;Parent=gene-AL60_RS18380;Dbxref=GenBank:WP_003409954.1;Name=WP_003409954.1;gbkey=CDS;gene=mpt64;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216496.1;locus_tag=AL60_RS18380;product=immunoprotective protein Mpt64;protein_id=WP_003409954.1;transl_table=11 NZ_KK316852.1 RefSeq gene 228828 229796 . - . ID=gene-AL60_RS18385;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AL60_RS18385;old_locus_tag=AL60_02618 NZ_KK316852.1 Protein Homology CDS 228828 229796 . - 0 ID=cds-WP_003899116.1;Parent=gene-AL60_RS18385;Dbxref=GenBank:WP_003899116.1;Name=WP_003899116.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177853.1;locus_tag=AL60_RS18385;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_003899116.1;transl_table=11 NZ_KK316852.1 RefSeq gene 230021 230440 . - . ID=gene-AL60_RS18390;Name=AL60_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18390;old_locus_tag=AL60_02619 NZ_KK316852.1 Protein Homology CDS 230021 230440 . - 0 ID=cds-WP_003409958.1;Parent=gene-AL60_RS18390;Dbxref=GenBank:WP_003409958.1;Name=WP_003409958.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216498.1;locus_tag=AL60_RS18390;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003409958.1;transl_table=11 NZ_KK316852.1 RefSeq gene 230449 230709 . - . ID=gene-AL60_RS18395;Name=AL60_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18395;old_locus_tag=AL60_02620 NZ_KK316852.1 Protein Homology CDS 230449 230709 . - 0 ID=cds-WP_003409968.1;Parent=gene-AL60_RS18395;Dbxref=GenBank:WP_003409968.1;Name=WP_003409968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837054.1;locus_tag=AL60_RS18395;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003409968.1;transl_table=11 NZ_KK316852.1 RefSeq gene 230852 232528 . + . ID=gene-AL60_RS18400;Name=AL60_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18400;old_locus_tag=AL60_02621 NZ_KK316852.1 Protein Homology CDS 230852 232528 . + 0 ID=cds-WP_012054305.1;Parent=gene-AL60_RS18400;Dbxref=GenBank:WP_012054305.1;Name=WP_012054305.1;Ontology_term=GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177854.1;locus_tag=AL60_RS18400;product=PecA family PE domain-processing aspartic protease;protein_id=WP_012054305.1;transl_table=11 NZ_KK316852.1 RefSeq gene 232516 233169 . - . ID=gene-AL60_RS18405;Name=cfp21;gbkey=Gene;gene=cfp21;gene_biotype=protein_coding;locus_tag=AL60_RS18405;old_locus_tag=AL60_02622 NZ_KK316852.1 Protein Homology CDS 232516 233169 . - 0 ID=cds-WP_003409976.1;Parent=gene-AL60_RS18405;Dbxref=GenBank:WP_003409976.1;Name=WP_003409976.1;gbkey=CDS;gene=cfp21;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216500.1;locus_tag=AL60_RS18405;product=cutinase Cfp21;protein_id=WP_003409976.1;transl_table=11 NZ_KK316852.1 RefSeq gene 233284 233514 . + . ID=gene-AL60_RS18410;Name=AL60_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18410;old_locus_tag=AL60_02623 NZ_KK316852.1 Protein Homology CDS 233284 233514 . + 0 ID=cds-WP_003409980.1;Parent=gene-AL60_RS18410;Dbxref=GenBank:WP_003409980.1;Name=WP_003409980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012394608.1;locus_tag=AL60_RS18410;product=DUF167 domain-containing protein;protein_id=WP_003409980.1;transl_table=11 NZ_KK316852.1 RefSeq gene 233599 234510 . - . ID=gene-AL60_RS18415;Name=AL60_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18415;old_locus_tag=AL60_02624 NZ_KK316852.1 Protein Homology CDS 233599 234510 . - 0 ID=cds-WP_003409986.1;Parent=gene-AL60_RS18415;Dbxref=GenBank:WP_003409986.1;Name=WP_003409986.1;Ontology_term=GO:0006351,GO:0008156,GO:0043200,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,negative regulation of DNA replication|0008156||IEA,response to amino acid|0043200||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216501.1;locus_tag=AL60_RS18415;product=ArgP/LysG family DNA-binding transcriptional regulator;protein_id=WP_003409986.1;transl_table=11 NZ_KK316852.1 RefSeq gene 234619 235218 . + . ID=gene-AL60_RS18420;Name=lysE;gbkey=Gene;gene=lysE;gene_biotype=protein_coding;locus_tag=AL60_RS18420;old_locus_tag=AL60_02625 NZ_KK316852.1 Protein Homology CDS 234619 235218 . + 0 ID=cds-WP_003409989.1;Parent=gene-AL60_RS18420;Dbxref=GenBank:WP_003409989.1;Name=WP_003409989.1;Ontology_term=GO:0016020;gbkey=CDS;gene=lysE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216502.1;locus_tag=AL60_RS18420;product=L-lysine exporter;protein_id=WP_003409989.1;transl_table=11 NZ_KK316852.1 RefSeq gene 235634 236062 . + . ID=gene-AL60_RS18425;Name=AL60_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18425;old_locus_tag=AL60_02626 NZ_KK316852.1 Protein Homology CDS 235634 236062 . + 0 ID=cds-WP_003906713.1;Parent=gene-AL60_RS18425;Dbxref=GenBank:WP_003906713.1;Name=WP_003906713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216503.1;locus_tag=AL60_RS18425;product=cellulose-binding protein;protein_id=WP_003906713.1;transl_table=11 NZ_KK316852.1 RefSeq gene 236288 236827 . + . ID=gene-AL60_RS18430;Name=erm(37);gbkey=Gene;gene=erm(37);gene_biotype=protein_coding;locus_tag=AL60_RS18430;old_locus_tag=AL60_02627 NZ_KK316852.1 Protein Homology CDS 236288 236827 . + 0 ID=cds-WP_003900446.1;Parent=gene-AL60_RS18430;Dbxref=GenBank:WP_003900446.1;Name=WP_003900446.1;gbkey=CDS;gene=erm(37);inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900446.1;locus_tag=AL60_RS18430;product=23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37);protein_id=WP_003900446.1;transl_table=11 NZ_KK316852.1 RefSeq gene 237007 237279 . + . ID=gene-AL60_RS27960;Name=AL60_RS27960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27960 NZ_KK316852.1 Protein Homology CDS 237007 237279 . + 0 ID=cds-WP_003409997.1;Parent=gene-AL60_RS27960;Dbxref=GenBank:WP_003409997.1;Name=WP_003409997.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.6;locus_tag=AL60_RS27960;product=PIN domain-containing protein;protein_id=WP_003409997.1;transl_table=11 NZ_KK316852.1 RefSeq gene 237347 237907 . - . ID=gene-AL60_RS18435;Name=AL60_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18435;old_locus_tag=AL60_02628 NZ_KK316852.1 Protein Homology CDS 237347 237907 . - 0 ID=cds-WP_003410001.1;Parent=gene-AL60_RS18435;Dbxref=GenBank:WP_003410001.1;Name=WP_003410001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216505.1;locus_tag=AL60_RS18435;product=RES family NAD+ phosphorylase;protein_id=WP_003410001.1;transl_table=11 NZ_KK316852.1 RefSeq gene 237904 238245 . - . ID=gene-AL60_RS18440;Name=AL60_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18440;old_locus_tag=AL60_02629 NZ_KK316852.1 Protein Homology CDS 237904 238245 . - 0 ID=cds-WP_003410003.1;Parent=gene-AL60_RS18440;Dbxref=GenBank:WP_003410003.1;Name=WP_003410003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216506.1;locus_tag=AL60_RS18440;product=antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein;protein_id=WP_003410003.1;transl_table=11 NZ_KK316852.1 RefSeq gene 238331 238588 . + . ID=gene-AL60_RS18445;Name=AL60_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18445 NZ_KK316852.1 Protein Homology CDS 238331 238588 . + 0 ID=cds-WP_003410006.1;Parent=gene-AL60_RS18445;Dbxref=GenBank:WP_003410006.1;Name=WP_003410006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917558.1;locus_tag=AL60_RS18445;product=hypothetical protein;protein_id=WP_003410006.1;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 238737 238824 . - . ID=gene-AL60_RS28155;Name=AL60_RS28155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28155;partial=true;pseudo=true;start_range=.,238737 NZ_KK316852.1 Protein Homology CDS 238737 238824 . - 0 ID=cds-AL60_RS28155;Parent=gene-AL60_RS28155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191102.1;locus_tag=AL60_RS28155;partial=true;product=dehydrogenase;pseudo=true;start_range=.,238737;transl_table=11 NZ_KK316852.1 RefSeq gene 238913 239257 . - . ID=gene-AL60_RS18455;Name=mazF6;gbkey=Gene;gene=mazF6;gene_biotype=protein_coding;gene_synonym=mazF-mt3;locus_tag=AL60_RS18455;old_locus_tag=AL60_02631 NZ_KK316852.1 Protein Homology CDS 238913 239257 . - 0 ID=cds-WP_003410010.1;Parent=gene-AL60_RS18455;Dbxref=GenBank:WP_003410010.1;Name=WP_003410010.1;gbkey=CDS;gene=mazF6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216507.1;locus_tag=AL60_RS18455;product=type II toxin-antitoxin system toxin endoribonuclease MazF6;protein_id=WP_003410010.1;transl_table=11 NZ_KK316852.1 RefSeq gene 239251 239499 . - . ID=gene-AL60_RS18460;Name=AL60_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18460;old_locus_tag=AL60_02632 NZ_KK316852.1 Protein Homology CDS 239251 239499 . - 0 ID=cds-WP_003410014.1;Parent=gene-AL60_RS18460;Dbxref=GenBank:WP_003410014.1;Name=WP_003410014.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410673.1;locus_tag=AL60_RS18460;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003410014.1;transl_table=11 NZ_KK316852.1 RefSeq gene 239599 241914 . - . ID=gene-AL60_RS18465;Name=ctpG;gbkey=Gene;gene=ctpG;gene_biotype=protein_coding;locus_tag=AL60_RS18465;old_locus_tag=AL60_02633 NZ_KK316852.1 Protein Homology CDS 239599 241914 . - 0 ID=cds-WP_003899120.1;Parent=gene-AL60_RS18465;Dbxref=GenBank:WP_003899120.1;Name=WP_003899120.1;gbkey=CDS;gene=ctpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216508.1;locus_tag=AL60_RS18465;product=cation transporter ATPase CptG;protein_id=WP_003899120.1;transl_table=11 NZ_KK316852.1 RefSeq gene 241911 242183 . - . ID=gene-AL60_RS18470;Name=AL60_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18470;old_locus_tag=AL60_02634 NZ_KK316852.1 Protein Homology CDS 241911 242183 . - 0 ID=cds-WP_003410017.1;Parent=gene-AL60_RS18470;Dbxref=GenBank:WP_003410017.1;Name=WP_003410017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216509.1;locus_tag=AL60_RS18470;product=DUF1490 family protein;protein_id=WP_003410017.1;transl_table=11 NZ_KK316852.1 RefSeq gene 242236 242592 . - . ID=gene-AL60_RS18475;Name=cmtR;gbkey=Gene;gene=cmtR;gene_biotype=protein_coding;locus_tag=AL60_RS18475;old_locus_tag=AL60_02635 NZ_KK316852.1 Protein Homology CDS 242236 242592 . - 0 ID=cds-WP_003410018.1;Parent=gene-AL60_RS18475;Dbxref=GenBank:WP_003410018.1;Name=WP_003410018.1;Ontology_term=GO:0006355,GO:0010288,GO:0046686,GO:0003700,GO:0032791,GO:0046870,GO:0097063;gbkey=CDS;gene=cmtR;go_function=DNA-binding transcription factor activity|0003700||IEA,lead ion binding|0032791||IEA,cadmium ion binding|0046870||IEA,cadmium ion sensor activity|0097063||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to lead ion|0010288||IEA,response to cadmium ion|0046686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216510.1;locus_tag=AL60_RS18475;product=Cd(II)/Pb(II)-sensing metalloregulatory transcriptional regulator CmtR;protein_id=WP_003410018.1;transl_table=11 NZ_KK316852.1 RefSeq gene 242749 243516 . + . ID=gene-AL60_RS18480;Name=AL60_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18480;old_locus_tag=AL60_02636 NZ_KK316852.1 Protein Homology CDS 242749 243516 . + 0 ID=cds-WP_003410019.1;Parent=gene-AL60_RS18480;Dbxref=GenBank:WP_003410019.1;Name=WP_003410019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216511.1;locus_tag=AL60_RS18480;product=hemerythrin domain-containing protein;protein_id=WP_003410019.1;transl_table=11 NZ_KK316852.1 RefSeq gene 243612 244565 . + . ID=gene-AL60_RS18485;Name=AL60_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18485;old_locus_tag=AL60_02637 NZ_KK316852.1 Protein Homology CDS 243612 244565 . + 0 ID=cds-WP_003899121.1;Parent=gene-AL60_RS18485;Dbxref=GenBank:WP_003899121.1;Name=WP_003899121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216512.1;locus_tag=AL60_RS18485;product=universal stress protein;protein_id=WP_003899121.1;transl_table=11 NZ_KK316852.1 RefSeq gene 244767 247484 . + . ID=gene-AL60_RS18490;Name=ctpF;gbkey=Gene;gene=ctpF;gene_biotype=protein_coding;locus_tag=AL60_RS18490;old_locus_tag=AL60_02638 NZ_KK316852.1 Protein Homology CDS 244767 247484 . + 0 ID=cds-WP_003410027.1;Parent=gene-AL60_RS18490;Dbxref=GenBank:WP_003410027.1;Name=WP_003410027.1;gbkey=CDS;gene=ctpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216513.1;locus_tag=AL60_RS18490;product=cation-transporting P-type ATPase;protein_id=WP_003410027.1;transl_table=11 NZ_KK316852.1 RefSeq gene 247553 248329 . - . ID=gene-AL60_RS18495;Name=AL60_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18495;old_locus_tag=AL60_02639 NZ_KK316852.1 Protein Homology CDS 247553 248329 . - 0 ID=cds-WP_003899122.1;Parent=gene-AL60_RS18495;Dbxref=GenBank:WP_003899122.1;Name=WP_003899122.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216514.1;locus_tag=AL60_RS18495;product=isocitrate lyase/PEP mutase family protein;protein_id=WP_003899122.1;transl_table=11 NZ_KK316852.1 RefSeq gene 248424 249746 . - . ID=gene-AL60_RS18500;Name=AL60_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18500;old_locus_tag=AL60_02640 NZ_KK316852.1 Protein Homology CDS 248424 249746 . - 0 ID=cds-WP_003410039.1;Parent=gene-AL60_RS18500;Dbxref=GenBank:WP_003410039.1;Name=WP_003410039.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216515.1;locus_tag=AL60_RS18500;product=APC family permease;protein_id=WP_003410039.1;transl_table=11 NZ_KK316852.1 RefSeq gene 249817 251430 . + . ID=gene-AL60_RS18505;Name=AL60_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18505;old_locus_tag=AL60_02641 NZ_KK316852.1 Protein Homology CDS 249817 251430 . + 0 ID=cds-WP_003410042.1;Parent=gene-AL60_RS18505;Dbxref=GenBank:WP_003410042.1;Name=WP_003410042.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216516.1;locus_tag=AL60_RS18505;product=NAD(P)-binding protein;protein_id=WP_003410042.1;transl_table=11 NZ_KK316852.1 RefSeq gene 251440 252192 . + . ID=gene-AL60_RS18510;Name=AL60_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18510;old_locus_tag=AL60_02642 NZ_KK316852.1 Protein Homology CDS 251440 252192 . + 0 ID=cds-WP_003900448.1;Parent=gene-AL60_RS18510;Dbxref=GenBank:WP_003900448.1;Name=WP_003900448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216517.1;locus_tag=AL60_RS18510;product=acyl-[acyl-carrier-protein] thioesterase;protein_id=WP_003900448.1;transl_table=11 NZ_KK316852.1 RefSeq gene 252268 253050 . + . ID=gene-AL60_RS18515;Name=AL60_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18515;old_locus_tag=AL60_02643 NZ_KK316852.1 Protein Homology CDS 252268 253050 . + 0 ID=cds-WP_003410047.1;Parent=gene-AL60_RS18515;Dbxref=GenBank:WP_003410047.1;Name=WP_003410047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216518.1;locus_tag=AL60_RS18515;product=SDR family oxidoreductase;protein_id=WP_003410047.1;transl_table=11 NZ_KK316852.1 RefSeq gene 253171 253860 . - . ID=gene-AL60_RS18520;Name=AL60_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18520;old_locus_tag=AL60_02644 NZ_KK316852.1 Protein Homology CDS 253171 253860 . - 0 ID=cds-WP_003899125.1;Parent=gene-AL60_RS18520;Dbxref=GenBank:WP_003899125.1;Name=WP_003899125.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899125.1;locus_tag=AL60_RS18520;product=class I SAM-dependent methyltransferase;protein_id=WP_003899125.1;transl_table=11 NZ_KK316852.1 RefSeq gene 253868 254065 . - . ID=gene-AL60_RS27195;Name=AL60_RS27195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27195 NZ_KK316852.1 Protein Homology CDS 253868 254065 . - 0 ID=cds-WP_031681557.1;Parent=gene-AL60_RS27195;Dbxref=GenBank:WP_031681557.1;Name=WP_031681557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410051.1;locus_tag=AL60_RS27195;product=hypothetical protein;protein_id=WP_031681557.1;transl_table=11 NZ_KK316852.1 RefSeq gene 254086 255582 . - . ID=gene-AL60_RS18525;Name=AL60_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18525;old_locus_tag=AL60_02645 NZ_KK316852.1 Protein Homology CDS 254086 255582 . - 0 ID=cds-WP_003410057.1;Parent=gene-AL60_RS18525;Dbxref=GenBank:WP_003410057.1;Name=WP_003410057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216520.1;locus_tag=AL60_RS18525;product=bifunctional aminoglycoside phosphotransferase/ATP-binding protein;protein_id=WP_003410057.1;transl_table=11 NZ_KK316852.1 RefSeq gene 255604 256491 . - . ID=gene-AL60_RS18530;Name=AL60_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18530;old_locus_tag=AL60_02646 NZ_KK316852.1 Protein Homology CDS 255604 256491 . - 0 ID=cds-WP_003410060.1;Parent=gene-AL60_RS18530;Dbxref=GenBank:WP_003410060.1;Name=WP_003410060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216521.1;locus_tag=AL60_RS18530;product=universal stress protein;protein_id=WP_003410060.1;transl_table=11 NZ_KK316852.1 RefSeq gene 256610 260593 . + . ID=gene-AL60_RS18535;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AL60_RS18535;old_locus_tag=AL60_02647 NZ_KK316852.1 Protein Homology CDS 256610 260593 . + 0 ID=cds-WP_003410063.1;Parent=gene-AL60_RS18535;Dbxref=GenBank:WP_003410063.1;Name=WP_003410063.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177855.1;locus_tag=AL60_RS18535;product=trehalose-phosphatase;protein_id=WP_003410063.1;transl_table=11 NZ_KK316852.1 RefSeq gene 260692 261036 . - . ID=gene-AL60_RS18540;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=AL60_RS18540;old_locus_tag=AL60_02648 NZ_KK316852.1 Protein Homology CDS 260692 261036 . - 0 ID=cds-WP_003410065.1;Parent=gene-AL60_RS18540;Dbxref=GenBank:WP_003410065.1;Name=WP_003410065.1;Ontology_term=GO:0009055,GO:0046872;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216523.1;locus_tag=AL60_RS18540;product=ferredoxin;protein_id=WP_003410065.1;transl_table=11 NZ_KK316852.1 RefSeq gene 261225 262394 . - . ID=gene-AL60_RS18545;Name=AL60_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18545;old_locus_tag=AL60_02649 NZ_KK316852.1 Protein Homology CDS 261225 262394 . - 0 ID=cds-WP_003899126.1;Parent=gene-AL60_RS18545;Dbxref=GenBank:WP_003899126.1;Name=WP_003899126.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899126.1;locus_tag=AL60_RS18545;product=ATP-binding protein;protein_id=WP_003899126.1;transl_table=11 NZ_KK316852.1 RefSeq gene 262653 262880 . + . ID=gene-AL60_RS18550;Name=AL60_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18550;old_locus_tag=AL60_02650 NZ_KK316852.1 Protein Homology CDS 262653 262880 . + 0 ID=cds-WP_003911750.1;Parent=gene-AL60_RS18550;Dbxref=GenBank:WP_003911750.1;Name=WP_003911750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019283586.1;locus_tag=AL60_RS18550;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003911750.1;transl_table=11 NZ_KK316852.1 RefSeq gene 262881 263279 . + . ID=gene-AL60_RS18555;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=AL60_RS18555;old_locus_tag=AL60_02651 NZ_KK316852.1 Protein Homology CDS 262881 263279 . + 0 ID=cds-WP_003410075.1;Parent=gene-AL60_RS18555;Dbxref=GenBank:WP_003410075.1;Name=WP_003410075.1;Ontology_term=GO:0004518,GO:0110001;gbkey=CDS;gene=vapC;go_component=toxin-antitoxin complex|0110001||IEA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216526.1;locus_tag=AL60_RS18555;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003410075.1;transl_table=11 NZ_KK316852.1 RefSeq gene 263462 263893 . - . ID=gene-AL60_RS18560;Name=AL60_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18560;old_locus_tag=AL60_02652 NZ_KK316852.1 Protein Homology CDS 263462 263893 . - 0 ID=cds-WP_003410078.1;Parent=gene-AL60_RS18560;Dbxref=GenBank:WP_003410078.1;Name=WP_003410078.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216527.1;locus_tag=AL60_RS18560;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003410078.1;transl_table=11 NZ_KK316852.1 RefSeq gene 263994 264428 . + . ID=gene-AL60_RS18565;Name=AL60_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18565;old_locus_tag=AL60_02653 NZ_KK316852.1 Protein Homology CDS 263994 264428 . + 0 ID=cds-WP_003914358.1;Parent=gene-AL60_RS18565;Dbxref=GenBank:WP_003914358.1;Name=WP_003914358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914358.1;locus_tag=AL60_RS18565;product=DUF1398 domain-containing protein;protein_id=WP_003914358.1;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 264564 264823 . - . ID=gene-AL60_RS28160;Name=AL60_RS28160;end_range=264823,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28160;partial=true;pseudo=true NZ_KK316852.1 Protein Homology CDS 264564 264823 . - 0 ID=cds-AL60_RS28160;Parent=gene-AL60_RS28160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=264823,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410139.1;locus_tag=AL60_RS28160;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 264865 265047 . - . ID=gene-AL60_RS26185;Name=AL60_RS26185;end_range=265047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26185;partial=true;pseudo=true NZ_KK316852.1 Protein Homology CDS 264865 265047 . - 0 ID=cds-AL60_RS26185;Parent=gene-AL60_RS26185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=265047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217738.1;locus_tag=AL60_RS26185;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 265069 266296 . + . ID=gene-AL60_RS28165;Name=AL60_RS28165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28165;pseudo=true NZ_KK316852.1 Protein Homology CDS 265069 266296 . + 0 ID=cds-AL60_RS28165;Parent=gene-AL60_RS28165;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007168642.1;locus_tag=AL60_RS28165;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_KK316852.1 RefSeq gene 266424 267680 . - . ID=gene-AL60_RS18575;Name=AL60_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18575;old_locus_tag=AL60_02656 NZ_KK316852.1 Protein Homology CDS 266424 267680 . - 0 ID=cds-WP_003410095.1;Parent=gene-AL60_RS18575;Dbxref=GenBank:WP_003410095.1;Name=WP_003410095.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216531.1;locus_tag=AL60_RS18575;product=HNH endonuclease signature motif containing protein;protein_id=WP_003410095.1;transl_table=11 NZ_KK316852.1 RefSeq gene 268034 268609 . + . ID=gene-AL60_RS18580;Name=AL60_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18580;old_locus_tag=AL60_02657 NZ_KK316852.1 Protein Homology CDS 268034 268609 . + 0 ID=cds-WP_003410100.1;Parent=gene-AL60_RS18580;Dbxref=GenBank:WP_003410100.1;Name=WP_003410100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216532.1;locus_tag=AL60_RS18580;product=hypothetical protein;protein_id=WP_003410100.1;transl_table=11 NZ_KK316852.1 RefSeq gene 268606 269646 . + . ID=gene-AL60_RS18585;Name=AL60_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18585;old_locus_tag=AL60_02658 NZ_KK316852.1 Protein Homology CDS 268606 269646 . + 0 ID=cds-WP_003410103.1;Parent=gene-AL60_RS18585;Dbxref=GenBank:WP_003410103.1;Name=WP_003410103.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216533.1;locus_tag=AL60_RS18585;product=helix-turn-helix domain-containing protein;protein_id=WP_003410103.1;transl_table=11 NZ_KK316852.1 RefSeq gene 269888 270607 . + . ID=gene-AL60_RS18590;Name=AL60_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18590;old_locus_tag=AL60_02659 NZ_KK316852.1 Protein Homology CDS 269888 270607 . + 0 ID=cds-WP_003410108.1;Parent=gene-AL60_RS18590;Dbxref=GenBank:WP_003410108.1;Name=WP_003410108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216534.1;locus_tag=AL60_RS18590;product=Rv2018 family toxin-antitoxin system antitoxin;protein_id=WP_003410108.1;transl_table=11 NZ_KK316852.1 RefSeq gene 270597 271013 . + . ID=gene-AL60_RS18595;Name=AL60_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18595;old_locus_tag=AL60_02660 NZ_KK316852.1 Protein Homology CDS 270597 271013 . + 0 ID=cds-WP_003410114.1;Parent=gene-AL60_RS18595;Dbxref=GenBank:WP_003410114.1;Name=WP_003410114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216535.1;locus_tag=AL60_RS18595;product=Rv2019 family toxin-antitoxin system toxin ribonuclease;protein_id=WP_003410114.1;transl_table=11 NZ_KK316852.1 RefSeq gene 271029 271328 . - . ID=gene-AL60_RS18600;Name=AL60_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18600;old_locus_tag=AL60_02661 NZ_KK316852.1 Protein Homology CDS 271029 271328 . - 0 ID=cds-WP_003410120.1;Parent=gene-AL60_RS18600;Dbxref=GenBank:WP_003410120.1;Name=WP_003410120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410120.1;locus_tag=AL60_RS18600;product=type ISP restriction/modification enzyme;protein_id=WP_003410120.1;transl_table=11 NZ_KK316852.1 RefSeq gene 271413 271718 . - . ID=gene-AL60_RS18605;Name=AL60_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18605;old_locus_tag=AL60_02662 NZ_KK316852.1 Protein Homology CDS 271413 271718 . - 0 ID=cds-WP_003410124.1;Parent=gene-AL60_RS18605;Dbxref=GenBank:WP_003410124.1;Name=WP_003410124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216537.1;locus_tag=AL60_RS18605;product=helix-turn-helix domain-containing protein;protein_id=WP_003410124.1;transl_table=11 NZ_KK316852.1 RefSeq gene 271727 272332 . - . ID=gene-AL60_RS26190;Name=AL60_RS26190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26190;old_locus_tag=AL60_02663 NZ_KK316852.1 Protein Homology CDS 271727 272332 . - 0 ID=cds-WP_003900449.1;Parent=gene-AL60_RS26190;Dbxref=GenBank:WP_003900449.1;Name=WP_003900449.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216538.1;locus_tag=AL60_RS26190;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003900449.1;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 272495 272773 . - . ID=gene-AL60_RS28170;Name=AL60_RS28170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28170;partial=true;pseudo=true;start_range=.,272495 NZ_KK316852.1 Protein Homology CDS 272495 272773 . - 0 ID=cds-AL60_RS28170;Parent=gene-AL60_RS28170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_374101691.1;locus_tag=AL60_RS28170;partial=true;product=IS1380 family transposase;pseudo=true;start_range=.,272495;transl_table=11 NZ_KK316852.1 RefSeq gene 272876 273553 . - . ID=gene-AL60_RS18620;Name=AL60_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18620;old_locus_tag=AL60_02665 NZ_KK316852.1 Protein Homology CDS 272876 273553 . - 0 ID=cds-WP_003900450.1;Parent=gene-AL60_RS18620;Dbxref=GenBank:WP_003900450.1;Name=WP_003900450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003904758.1;locus_tag=AL60_RS18620;product=hypothetical protein;protein_id=WP_003900450.1;transl_table=11 NZ_KK316852.1 RefSeq gene 273505 273741 . - . ID=gene-AL60_RS18625;Name=AL60_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18625;old_locus_tag=AL60_02666 NZ_KK316852.1 Protein Homology CDS 273505 273741 . - 0 ID=cds-WP_003410133.1;Parent=gene-AL60_RS18625;Dbxref=GenBank:WP_003410133.1;Name=WP_003410133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410133.1;locus_tag=AL60_RS18625;product=hypothetical protein;protein_id=WP_003410133.1;transl_table=11 NZ_KK316852.1 RefSeq gene 273948 274844 . - . ID=gene-AL60_RS18630;Name=AL60_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18630;old_locus_tag=AL60_02667 NZ_KK316852.1 Protein Homology CDS 273948 274844 . - 0 ID=cds-WP_003906720.1;Parent=gene-AL60_RS18630;Dbxref=GenBank:WP_003906720.1;Name=WP_003906720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917565.1;locus_tag=AL60_RS18630;product=hypothetical protein;protein_id=WP_003906720.1;transl_table=11 NZ_KK316852.1 RefSeq gene 275028 279848 . - . ID=gene-AL60_RS18635;Name=AL60_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18635;old_locus_tag=AL60_02668 NZ_KK316852.1 Protein Homology CDS 275028 279848 . - 0 ID=cds-WP_003900451.1;Parent=gene-AL60_RS18635;Dbxref=GenBank:WP_003900451.1;Name=WP_003900451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410139.1;locus_tag=AL60_RS18635;product=DEAD/DEAH box helicase;protein_id=WP_003900451.1;transl_table=11 NZ_KK316852.1 RefSeq pseudogene 280151 280384 . + . ID=gene-AL60_RS28175;Name=AL60_RS28175;end_range=280384,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28175;partial=true;pseudo=true;start_range=.,280151 NZ_KK316852.1 Protein Homology CDS 280151 280384 . + 0 ID=cds-AL60_RS28175;Parent=gene-AL60_RS28175;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=280384,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611777.1;locus_tag=AL60_RS28175;partial=true;product=IS3-like element ISMysp3 family transposase;pseudo=true;start_range=.,280151;transl_table=11 NZ_KK316852.1 RefSeq gene 280358 281356 . - . ID=gene-AL60_RS18640;Name=AL60_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18640;old_locus_tag=AL60_02670 NZ_KK316852.1 Protein Homology CDS 280358 281356 . - 0 ID=cds-WP_003410146.1;Parent=gene-AL60_RS18640;Dbxref=GenBank:WP_003410146.1;Name=WP_003410146.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216541.1;locus_tag=AL60_RS18640;product=cation diffusion facilitator family transporter;protein_id=WP_003410146.1;transl_table=11 NZ_KK316852.1 RefSeq gene 281471 282355 . - . ID=gene-AL60_RS18645;Name=AL60_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18645;old_locus_tag=AL60_02671 NZ_KK316852.1 Protein Homology CDS 281471 282355 . - 0 ID=cds-WP_003410150.1;Parent=gene-AL60_RS18645;Dbxref=GenBank:WP_003410150.1;Name=WP_003410150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216542.1;locus_tag=AL60_RS18645;product=universal stress protein;protein_id=WP_003410150.1;transl_table=11 NZ_KK316852.1 RefSeq gene 282395 284116 . - . ID=gene-AL60_RS18650;Name=dosT;gbkey=Gene;gene=dosT;gene_biotype=protein_coding;locus_tag=AL60_RS18650;old_locus_tag=AL60_02672 NZ_KK316852.1 Protein Homology CDS 282395 284116 . - 0 ID=cds-WP_003899138.1;Parent=gene-AL60_RS18650;Dbxref=GenBank:WP_003899138.1;Name=WP_003899138.1;gbkey=CDS;gene=dosT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216543.1;locus_tag=AL60_RS18650;product=two-component system sensor histidine kinase DosT;protein_id=WP_003899138.1;transl_table=11 NZ_KK316852.1 RefSeq gene 284177 285016 . - . ID=gene-AL60_RS18655;Name=AL60_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18655;old_locus_tag=AL60_02673 NZ_KK316852.1 Protein Homology CDS 284177 285016 . - 0 ID=cds-WP_003410171.1;Parent=gene-AL60_RS18655;Dbxref=GenBank:WP_003410171.1;Name=WP_003410171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216544.1;locus_tag=AL60_RS18655;product=universal stress protein;protein_id=WP_003410171.1;transl_table=11 NZ_KK316852.1 RefSeq gene 285013 286032 . - . ID=gene-AL60_RS18660;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=AL60_RS18660;old_locus_tag=AL60_02674 NZ_KK316852.1 Protein Homology CDS 285013 286032 . - 0 ID=cds-WP_003899139.1;Parent=gene-AL60_RS18660;Dbxref=GenBank:WP_003899139.1;Name=WP_003899139.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;gene=pfkB;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216545.1;locus_tag=AL60_RS18660;product=1-phosphofructokinase family hexose kinase;protein_id=WP_003899139.1;transl_table=11 NZ_KK316852.1 RefSeq gene 286049 288094 . - . ID=gene-AL60_RS18665;Name=AL60_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18665;old_locus_tag=AL60_02675 NZ_KK316852.1 Protein Homology CDS 286049 288094 . - 0 ID=cds-WP_003410178.1;Parent=gene-AL60_RS18665;Dbxref=GenBank:WP_003410178.1;Name=WP_003410178.1;Ontology_term=GO:0046677;gbkey=CDS;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216546.1;locus_tag=AL60_RS18665;product=erythromycin esterase family protein;protein_id=WP_003410178.1;transl_table=11 NZ_KK316852.1 RefSeq gene 288106 288540 . - . ID=gene-AL60_RS18670;Name=hspX;gbkey=Gene;gene=hspX;gene_biotype=protein_coding;gene_synonym=acr;locus_tag=AL60_RS18670;old_locus_tag=AL60_02676 NZ_KK316852.1 Protein Homology CDS 288106 288540 . - 0 ID=cds-WP_003410189.1;Parent=gene-AL60_RS18670;Dbxref=GenBank:WP_003410189.1;Name=WP_003410189.1;gbkey=CDS;gene=hspX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216547.1;locus_tag=AL60_RS18670;product=alpha-crystallin HspX;protein_id=WP_003410189.1;transl_table=11 NZ_KK316852.1 RefSeq gene 288737 289732 . + . ID=gene-AL60_RS18675;Name=acg;gbkey=Gene;gene=acg;gene_biotype=protein_coding;locus_tag=AL60_RS18675;old_locus_tag=AL60_02677 NZ_KK316852.1 Protein Homology CDS 288737 289732 . + 0 ID=cds-WP_003410193.1;Parent=gene-AL60_RS18675;Dbxref=GenBank:WP_003410193.1;Name=WP_003410193.1;gbkey=CDS;gene=acg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216548.1;locus_tag=AL60_RS18675;product=FMN-binding protein Acg;protein_id=WP_003410193.1;transl_table=11 NZ_KK316852.1 RefSeq gene 289848 290690 . - . ID=gene-AL60_RS18680;Name=AL60_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18680;old_locus_tag=AL60_02678 NZ_KK316852.1 Protein Homology CDS 289848 290690 . - 0 ID=cds-WP_003410196.1;Parent=gene-AL60_RS18680;Dbxref=GenBank:WP_003410196.1;Name=WP_003410196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216549.1;locus_tag=AL60_RS18680;product=DUF3097 domain-containing protein;protein_id=WP_003410196.1;transl_table=11 NZ_KK316852.1 RefSeq gene 290902 291225 . + . ID=gene-AL60_RS18685;Name=AL60_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18685;old_locus_tag=AL60_02679 NZ_KK316852.1 Protein Homology CDS 290902 291225 . + 0 ID=cds-WP_003410200.1;Parent=gene-AL60_RS18685;Dbxref=GenBank:WP_003410200.1;Name=WP_003410200.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216550.1;locus_tag=AL60_RS18685;product=ArsR/SmtB family transcription factor;protein_id=WP_003410200.1;transl_table=11 NZ_KK316852.1 RefSeq gene 291222 291710 . + . ID=gene-AL60_RS18690;Name=AL60_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18690;old_locus_tag=AL60_02680 NZ_KK316852.1 Protein Homology CDS 291222 291710 . + 0 ID=cds-WP_003899141.1;Parent=gene-AL60_RS18690;Dbxref=GenBank:WP_003899141.1;Name=WP_003899141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216551.1;locus_tag=AL60_RS18690;product=SRPBCC family protein;protein_id=WP_003899141.1;transl_table=11 NZ_KK316852.1 RefSeq gene 291707 292348 . + . ID=gene-AL60_RS18695;Name=AL60_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18695;old_locus_tag=AL60_02681 NZ_KK316852.1 Protein Homology CDS 291707 292348 . + 0 ID=cds-WP_003899142.1;Parent=gene-AL60_RS18695;Dbxref=GenBank:WP_003899142.1;Name=WP_003899142.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216552.1;locus_tag=AL60_RS18695;product=maleylpyruvate isomerase family mycothiol-dependent enzyme;protein_id=WP_003899142.1;transl_table=11 NZ_KK316852.1 RefSeq gene 292355 293329 . - . ID=gene-AL60_RS18700;Name=AL60_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18700;old_locus_tag=AL60_02682 NZ_KK316852.1 Protein Homology CDS 292355 293329 . - 0 ID=cds-WP_003906722.1;Parent=gene-AL60_RS18700;Dbxref=GenBank:WP_003906722.1;Name=WP_003906722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216553.1;locus_tag=AL60_RS18700;product=patatin-like phospholipase family protein;protein_id=WP_003906722.1;transl_table=11 NZ_KK316852.1 RefSeq gene 293331 294404 . - . ID=gene-AL60_RS18705;Name=AL60_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18705;old_locus_tag=AL60_02683 NZ_KK316852.1 Protein Homology CDS 293331 294404 . - 0 ID=cds-WP_003410218.1;Parent=gene-AL60_RS18705;Dbxref=GenBank:WP_003410218.1;Name=WP_003410218.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216554.1;locus_tag=AL60_RS18705;product=ABC transporter ATP-binding protein;protein_id=WP_003410218.1;transl_table=11 NZ_KK316852.1 RefSeq gene 294407 295249 . - . ID=gene-AL60_RS18710;Name=AL60_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18710;old_locus_tag=AL60_02684 NZ_KK316852.1 Protein Homology CDS 294407 295249 . - 0 ID=cds-WP_003410221.1;Parent=gene-AL60_RS18710;Dbxref=GenBank:WP_003410221.1;Name=WP_003410221.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216555.1;locus_tag=AL60_RS18710;product=carbohydrate ABC transporter permease;protein_id=WP_003410221.1;transl_table=11 NZ_KK316852.1 RefSeq gene 295236 296138 . - . ID=gene-AL60_RS18715;Name=AL60_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18715;old_locus_tag=AL60_02685 NZ_KK316852.1 Protein Homology CDS 295236 296138 . - 0 ID=cds-WP_003410224.1;Parent=gene-AL60_RS18715;Dbxref=GenBank:WP_003410224.1;Name=WP_003410224.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216556.1;locus_tag=AL60_RS18715;product=carbohydrate ABC transporter permease;protein_id=WP_003410224.1;transl_table=11 NZ_KK316852.1 RefSeq gene 296135 297454 . - . ID=gene-AL60_RS18720;Name=AL60_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18720;old_locus_tag=AL60_02686 NZ_KK316852.1 Protein Homology CDS 296135 297454 . - 0 ID=cds-WP_003410228.1;Parent=gene-AL60_RS18720;Dbxref=GenBank:WP_003410228.1;Name=WP_003410228.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216557.1;locus_tag=AL60_RS18720;product=ABC transporter substrate-binding protein;protein_id=WP_003410228.1;transl_table=11 NZ_KK316852.1 RefSeq gene 297492 298289 . - . ID=gene-AL60_RS18725;Name=AL60_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18725;old_locus_tag=AL60_02687 NZ_KK316852.1 Protein Homology CDS 297492 298289 . - 0 ID=cds-WP_003899143.1;Parent=gene-AL60_RS18725;Dbxref=GenBank:WP_003899143.1;Name=WP_003899143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216558.1;locus_tag=AL60_RS18725;product=ketosteroid isomerase family protein;protein_id=WP_003899143.1;transl_table=11 NZ_KK316852.1 RefSeq gene 298289 298849 . - . ID=gene-AL60_RS18730;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=AL60_RS18730;old_locus_tag=AL60_02688 NZ_KK316852.1 Protein Homology CDS 298289 298849 . - 0 ID=cds-WP_003410243.1;Parent=gene-AL60_RS18730;Dbxref=GenBank:WP_003410243.1;Name=WP_003410243.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216559.1;locus_tag=AL60_RS18730;product=pyrazinamidase PncA;protein_id=WP_003410243.1;transl_table=11 NZ_KK316852.1 RefSeq gene 298890 299240 . - . ID=gene-AL60_RS18735;Name=AL60_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18735;old_locus_tag=AL60_02689 NZ_KK316852.1 Protein Homology CDS 298890 299240 . - 0 ID=cds-WP_003902241.1;Parent=gene-AL60_RS18735;Dbxref=GenBank:WP_003902241.1;Name=WP_003902241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902241.1;locus_tag=AL60_RS18735;product=DUF2784 domain-containing protein;protein_id=WP_003902241.1;transl_table=11 NZ_KK316852.1 RefSeq gene 299293 300798 . - . ID=gene-AL60_RS18740;Name=lipT;gbkey=Gene;gene=lipT;gene_biotype=protein_coding;locus_tag=AL60_RS18740;old_locus_tag=AL60_02690 NZ_KK316852.1 Protein Homology CDS 299293 300798 . - 0 ID=cds-WP_003916923.1;Parent=gene-AL60_RS18740;Dbxref=GenBank:WP_003916923.1;Name=WP_003916923.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;gene=lipT;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940658.1;locus_tag=AL60_RS18740;product=carboxylesterase/lipase family protein;protein_id=WP_003916923.1;transl_table=11 NZ_KK316852.1 RefSeq gene 300877 301533 . + . ID=gene-AL60_RS18745;Name=AL60_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18745;old_locus_tag=AL60_02691 NZ_KK316852.1 Protein Homology CDS 300877 301533 . + 0 ID=cds-WP_003899146.1;Parent=gene-AL60_RS18745;Dbxref=GenBank:WP_003899146.1;Name=WP_003899146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216562.1;locus_tag=AL60_RS18745;product=hypothetical protein;protein_id=WP_003899146.1;transl_table=11 NZ_KK316852.1 RefSeq gene 301570 304134 . - . ID=gene-AL60_RS18750;Name=AL60_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18750;old_locus_tag=AL60_02692 NZ_KK316852.1 Protein Homology CDS 301570 304134 . - 0 ID=cds-WP_003410309.1;Parent=gene-AL60_RS18750;Dbxref=GenBank:WP_003410309.1;Name=WP_003410309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216563.1;locus_tag=AL60_RS18750;product=sugar epimerase family protein;protein_id=WP_003410309.1;transl_table=11 NZ_KK316852.1 RefSeq gene 304139 315796 . - . ID=gene-AL60_RS18755;Name=AL60_RS18755;end_range=315796,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18755;old_locus_tag=AL60_02693;partial=true NZ_KK316852.1 Protein Homology CDS 304139 315796 . - 0 ID=cds-WP_031721512.1;Parent=gene-AL60_RS18755;Dbxref=GenBank:WP_031721512.1;Name=WP_031721512.1;Ontology_term=GO:0030639,GO:0034081;end_range=315796,.;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216564.2;locus_tag=AL60_RS18755;partial=true;product=type I polyketide synthase;protein_id=WP_031721512.1;transl_table=11 ##sequence-region NZ_KK316853.1 1 229847 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316853.1 RefSeq region 1 229847 . + . ID=NZ_KK316853.1:1..229847;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316853.1 RefSeq pseudogene 91 465 . + . ID=gene-AL60_RS18760;Name=AL60_RS18760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS18760;old_locus_tag=AL60_02694;partial=true;pseudo=true;start_range=.,91 NZ_KK316853.1 Protein Homology CDS 91 465 . + 0 ID=cds-AL60_RS18760;Parent=gene-AL60_RS18760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217629.1;locus_tag=AL60_RS18760;partial=true;product=HAD-IA family hydrolase;pseudo=true;start_range=.,91;transl_table=11 NZ_KK316853.1 RefSeq gene 482 1012 . + . ID=gene-AL60_RS18765;Name=AL60_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18765;old_locus_tag=AL60_02695 NZ_KK316853.1 Protein Homology CDS 482 1012 . + 0 ID=cds-WP_003906986.1;Parent=gene-AL60_RS18765;Dbxref=GenBank:WP_003906986.1;Name=WP_003906986.1;Ontology_term=GO:0009116,GO:0001882,GO:0008270,GO:0019239;gbkey=CDS;go_function=nucleoside binding|0001882||IEA,zinc ion binding|0008270||IEA,deaminase activity|0019239||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217630.1;locus_tag=AL60_RS18765;product=nucleoside deaminase;protein_id=WP_003906986.1;transl_table=11 NZ_KK316853.1 RefSeq gene 1174 2421 . + . ID=gene-AL60_RS18770;Name=AL60_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18770;old_locus_tag=AL60_02696 NZ_KK316853.1 Protein Homology CDS 1174 2421 . + 0 ID=cds-WP_003900260.1-2;Parent=gene-AL60_RS18770;Dbxref=GenBank:WP_003900260.1;Name=WP_003900260.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL60_RS18770;product=IS256-like element IS1081 family transposase;protein_id=WP_003900260.1;transl_table=11 NZ_KK316853.1 RefSeq gene 2453 2578 . - . ID=gene-AL60_RS27840;Name=AL60_RS27840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27840 NZ_KK316853.1 Protein Homology CDS 2453 2578 . - 0 ID=cds-WP_257721561.1;Parent=gene-AL60_RS27840;Dbxref=GenBank:WP_257721561.1;Name=WP_257721561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019284056.1;locus_tag=AL60_RS27840;product=hypothetical protein;protein_id=WP_257721561.1;transl_table=11 NZ_KK316853.1 RefSeq gene 2553 3668 . + . ID=gene-AL60_RS18775;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=AL60_RS18775;old_locus_tag=AL60_02697 NZ_KK316853.1 Protein Homology CDS 2553 3668 . + 0 ID=cds-WP_229302526.1;Parent=gene-AL60_RS18775;Dbxref=GenBank:WP_229302526.1;Name=WP_229302526.1;Ontology_term=GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005094276.1;locus_tag=AL60_RS18775;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_229302526.1;transl_table=11 NZ_KK316853.1 RefSeq gene 3697 4530 . + . ID=gene-AL60_RS18780;Name=AL60_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18780;old_locus_tag=AL60_02698 NZ_KK316853.1 Protein Homology CDS 3697 4530 . + 0 ID=cds-WP_003404293.1-2;Parent=gene-AL60_RS18780;Dbxref=GenBank:WP_003404293.1;Name=WP_003404293.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215330.1;locus_tag=AL60_RS18780;product=sulfurtransferase;protein_id=WP_003404293.1;transl_table=11 NZ_KK316853.1 RefSeq gene 4532 4834 . + . ID=gene-AL60_RS18785;Name=AL60_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18785;old_locus_tag=AL60_02699 NZ_KK316853.1 Protein Homology CDS 4532 4834 . + 0 ID=cds-WP_003404278.1-2;Parent=gene-AL60_RS18785;Dbxref=GenBank:WP_003404278.1;Name=WP_003404278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215329.1;locus_tag=AL60_RS18785;product=DUF1416 domain-containing protein;protein_id=WP_003404278.1;transl_table=11 NZ_KK316853.1 RefSeq gene 4855 5298 . + . ID=gene-AL60_RS18790;Name=AL60_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18790;old_locus_tag=AL60_02700 NZ_KK316853.1 Protein Homology CDS 4855 5298 . + 0 ID=cds-WP_003899923.1;Parent=gene-AL60_RS18790;Dbxref=GenBank:WP_003899923.1;Name=WP_003899923.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177931.1;locus_tag=AL60_RS18790;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_003899923.1;transl_table=11 NZ_KK316853.1 RefSeq gene 5295 5897 . + . ID=gene-AL60_RS18795;Name=AL60_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18795;old_locus_tag=AL60_02701 NZ_KK316853.1 Protein Homology CDS 5295 5897 . + 0 ID=cds-WP_003899924.1;Parent=gene-AL60_RS18795;Dbxref=GenBank:WP_003899924.1;Name=WP_003899924.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217636.1;locus_tag=AL60_RS18795;product=class I SAM-dependent methyltransferase;protein_id=WP_003899924.1;transl_table=11 NZ_KK316853.1 RefSeq gene 6232 7434 . + . ID=gene-AL60_RS18800;Name=cyp141;gbkey=Gene;gene=cyp141;gene_biotype=protein_coding;locus_tag=AL60_RS18800;old_locus_tag=AL60_02702 NZ_KK316853.1 Protein Homology CDS 6232 7434 . + 0 ID=cds-WP_003899925.1;Parent=gene-AL60_RS18800;Dbxref=GenBank:WP_003899925.1;Name=WP_003899925.1;gbkey=CDS;gene=cyp141;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217637.1;locus_tag=AL60_RS18800;product=cytochrome P450 Cyp141;protein_id=WP_003899925.1;transl_table=11 NZ_KK316853.1 RefSeq pseudogene 7516 7635 . - . ID=gene-AL60_RS26890;Name=AL60_RS26890;end_range=7635,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26890;partial=true;pseudo=true NZ_KK316853.1 Protein Homology CDS 7516 7635 . - 0 ID=cds-AL60_RS26890;Parent=gene-AL60_RS26890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=7635,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011291581.1;locus_tag=AL60_RS26890;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_KK316853.1 RefSeq gene 7857 8282 . + . ID=gene-AL60_RS18805;Name=AL60_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18805;old_locus_tag=AL60_02703 NZ_KK316853.1 Protein Homology CDS 7857 8282 . + 0 ID=cds-WP_003912101.1;Parent=gene-AL60_RS18805;Dbxref=GenBank:WP_003912101.1;Name=WP_003912101.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042840.4;locus_tag=AL60_RS18805;product=DUF6788 family protein;protein_id=WP_003912101.1;transl_table=11 NZ_KK316853.1 RefSeq gene 8292 8786 . + . ID=gene-AL60_RS18810;Name=AL60_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18810;old_locus_tag=AL60_02704 NZ_KK316853.1 Protein Homology CDS 8292 8786 . + 0 ID=cds-WP_003901547.1;Parent=gene-AL60_RS18810;Dbxref=GenBank:WP_003901547.1;Name=WP_003901547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217639.1;locus_tag=AL60_RS18810;product=hypothetical protein;protein_id=WP_003901547.1;transl_table=11 NZ_KK316853.1 RefSeq pseudogene 9087 9175 . + . ID=gene-AL60_RS28180;Name=AL60_RS28180;end_range=9175,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28180;partial=true;pseudo=true;start_range=.,9087 NZ_KK316853.1 Protein Homology CDS 9087 9175 . + 0 ID=cds-AL60_RS28180;Parent=gene-AL60_RS28180;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=9175,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177773.1;locus_tag=AL60_RS28180;partial=true;product=hypothetical protein;pseudo=true;start_range=.,9087;transl_table=11 NZ_KK316853.1 RefSeq gene 9229 10098 . + . ID=gene-AL60_RS18815;Name=moaR1;gbkey=Gene;gene=moaR1;gene_biotype=protein_coding;locus_tag=AL60_RS18815;old_locus_tag=AL60_02705 NZ_KK316853.1 Protein Homology CDS 9229 10098 . + 0 ID=cds-WP_003900636.1;Parent=gene-AL60_RS18815;Dbxref=GenBank:WP_003900636.1;Name=WP_003900636.1;gbkey=CDS;gene=moaR1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217640.1;locus_tag=AL60_RS18815;product=transcriptional regulator MoaR1;protein_id=WP_003900636.1;transl_table=11 NZ_KK316853.1 RefSeq gene 10199 11374 . - . ID=gene-AL60_RS18820;Name=AL60_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18820;old_locus_tag=AL60_02706 NZ_KK316853.1 Protein Homology CDS 10199 11374 . - 0 ID=cds-WP_003899929.1;Parent=gene-AL60_RS18820;Dbxref=GenBank:WP_003899929.1;Name=WP_003899929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177932.1;locus_tag=AL60_RS18820;product=PPE family protein;protein_id=WP_003899929.1;transl_table=11 NZ_KK316853.1 RefSeq gene 11870 12904 . + . ID=gene-AL60_RS18830;Name=AL60_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18830;old_locus_tag=AL60_02708 NZ_KK316853.1 Protein Homology CDS 11870 12904 . + 0 ID=cds-WP_003416354.1;Parent=gene-AL60_RS18830;Dbxref=GenBank:WP_003416354.1;Name=WP_003416354.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217643.1;locus_tag=AL60_RS18830;product=Acg family FMN-binding oxidoreductase;protein_id=WP_003416354.1;transl_table=11 NZ_KK316853.1 RefSeq gene 12891 13241 . - . ID=gene-AL60_RS0105060;Name=AL60_RS0105060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105060 NZ_KK316853.1 Protein Homology CDS 12891 13241 . - 0 ID=cds-WP_003416355.1;Parent=gene-AL60_RS0105060;Dbxref=GenBank:WP_003416355.1;Name=WP_003416355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416355.1;locus_tag=AL60_RS0105060;product=hypothetical protein;protein_id=WP_003416355.1;transl_table=11 NZ_KK316853.1 RefSeq gene 13323 13904 . - . ID=gene-AL60_RS0105065;Name=AL60_RS0105065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105065 NZ_KK316853.1 GeneMarkS-2+ CDS 13323 13904 . - 0 ID=cds-WP_003904179.1;Parent=gene-AL60_RS0105065;Dbxref=GenBank:WP_003904179.1;Name=WP_003904179.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0005524,GO:0016893,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,obsolete endonuclease activity%2C active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters|0016893||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS0105065;product=integrase catalytic domain-containing protein;protein_id=WP_003904179.1;transl_table=11 NZ_KK316853.1 RefSeq gene 14383 14715 . + . ID=gene-AL60_RS18835;Name=AL60_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18835;old_locus_tag=AL60_02710 NZ_KK316853.1 Protein Homology CDS 14383 14715 . + 0 ID=cds-WP_003416360.1;Parent=gene-AL60_RS18835;Dbxref=GenBank:WP_003416360.1;Name=WP_003416360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416360.1;locus_tag=AL60_RS18835;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_003416360.1;transl_table=11 NZ_KK316853.1 RefSeq gene 14698 16089 . - . ID=gene-AL60_RS18840;Name=tgs1;gbkey=Gene;gene=tgs1;gene_biotype=protein_coding;locus_tag=AL60_RS18840;old_locus_tag=AL60_02711 NZ_KK316853.1 Protein Homology CDS 14698 16089 . - 0 ID=cds-WP_012054341.1;Parent=gene-AL60_RS18840;Dbxref=GenBank:WP_012054341.1;Name=WP_012054341.1;gbkey=CDS;gene=tgs1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217646.1;locus_tag=AL60_RS18840;product=diacylglycerol O-acyltransferase;protein_id=WP_012054341.1;transl_table=11 NZ_KK316853.1 RefSeq gene 16274 17272 . + . ID=gene-AL60_RS18845;Name=AL60_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18845;old_locus_tag=AL60_02712 NZ_KK316853.1 Protein Homology CDS 16274 17272 . + 0 ID=cds-WP_003416362.1;Parent=gene-AL60_RS18845;Dbxref=GenBank:WP_003416362.1;Name=WP_003416362.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217647.3;locus_tag=AL60_RS18845;product=Acg family FMN-binding oxidoreductase;protein_id=WP_003416362.1;transl_table=11 NZ_KK316853.1 RefSeq gene 17252 18988 . - . ID=gene-AL60_RS18850;Name=dosS;gbkey=Gene;gene=dosS;gene_biotype=protein_coding;gene_synonym=devS;locus_tag=AL60_RS18850;old_locus_tag=AL60_02713 NZ_KK316853.1 Protein Homology CDS 17252 18988 . - 0 ID=cds-WP_003899933.1;Parent=gene-AL60_RS18850;Dbxref=GenBank:WP_003899933.1;Name=WP_003899933.1;gbkey=CDS;gene=dosS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217648.1;locus_tag=AL60_RS18850;product=hypoxia sensor histidine kinase DosS/DevS;protein_id=WP_003899933.1;transl_table=11 NZ_KK316853.1 RefSeq gene 18985 19638 . - . ID=gene-AL60_RS18855;Name=dosR;gbkey=Gene;gene=dosR;gene_biotype=protein_coding;gene_synonym=devR;locus_tag=AL60_RS18855;old_locus_tag=AL60_02714 NZ_KK316853.1 Protein Homology CDS 18985 19638 . - 0 ID=cds-WP_003416369.1;Parent=gene-AL60_RS18855;Dbxref=GenBank:WP_003416369.1;Name=WP_003416369.1;gbkey=CDS;gene=dosR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217649.1;locus_tag=AL60_RS18855;product=hypoxia response regulator transcription factor DosR/DevR;protein_id=WP_003416369.1;transl_table=11 NZ_KK316853.1 RefSeq gene 19666 20472 . - . ID=gene-AL60_RS18860;Name=AL60_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18860;old_locus_tag=AL60_02715 NZ_KK316853.1 Protein Homology CDS 19666 20472 . - 0 ID=cds-WP_003416373.1;Parent=gene-AL60_RS18860;Dbxref=GenBank:WP_003416373.1;Name=WP_003416373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217650.1;locus_tag=AL60_RS18860;product=universal stress protein;protein_id=WP_003416373.1;transl_table=11 NZ_KK316853.1 RefSeq pseudogene 21057 21440 . + . ID=gene-AL60_RS18865;Name=AL60_RS18865;end_range=21440,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS18865;old_locus_tag=AL60_02716;partial=true;pseudo=true NZ_KK316853.1 Protein Homology CDS 21057 21440 . + 0 ID=cds-AL60_RS18865;Parent=gene-AL60_RS18865;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=21440,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799322.1;locus_tag=AL60_RS18865;partial=true;product=PPE domain-containing protein;pseudo=true;transl_table=11 NZ_KK316853.1 RefSeq gene 21517 22659 . + . ID=gene-AL60_RS18870;Name=AL60_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18870;old_locus_tag=AL60_02717 NZ_KK316853.1 Protein Homology CDS 21517 22659 . + 0 ID=cds-WP_003416381.1;Parent=gene-AL60_RS18870;Dbxref=GenBank:WP_003416381.1;Name=WP_003416381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177935.1;locus_tag=AL60_RS18870;product=PPE family protein;protein_id=WP_003416381.1;transl_table=11 NZ_KK316853.1 RefSeq gene 22668 23000 . - . ID=gene-AL60_RS18875;Name=AL60_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18875;old_locus_tag=AL60_02718 NZ_KK316853.1 Protein Homology CDS 22668 23000 . - 0 ID=cds-WP_003416383.1;Parent=gene-AL60_RS18875;Dbxref=GenBank:WP_003416383.1;Name=WP_003416383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411850.1;locus_tag=AL60_RS18875;product=hypothetical protein;protein_id=WP_003416383.1;transl_table=11 NZ_KK316853.1 RefSeq gene 23116 23898 . + . ID=gene-AL60_RS18880;Name=hisN;gbkey=Gene;gene=hisN;gene_biotype=protein_coding;locus_tag=AL60_RS18880;old_locus_tag=AL60_02719 NZ_KK316853.1 Protein Homology CDS 23116 23898 . + 0 ID=cds-WP_003416388.1;Parent=gene-AL60_RS18880;Dbxref=GenBank:WP_003416388.1;Name=WP_003416388.1;Ontology_term=GO:0000105,GO:0004401;gbkey=CDS;gene=hisN;go_function=histidinol-phosphatase activity|0004401||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217653.1;locus_tag=AL60_RS18880;product=histidinol-phosphatase;protein_id=WP_003416388.1;transl_table=11 NZ_KK316853.1 RefSeq gene 23918 25006 . + . ID=gene-AL60_RS18885;Name=amrS;gbkey=Gene;gene=amrS;gene_biotype=protein_coding;locus_tag=AL60_RS18885;old_locus_tag=AL60_02720 NZ_KK316853.1 Protein Homology CDS 23918 25006 . + 0 ID=cds-WP_003899934.1;Parent=gene-AL60_RS18885;Dbxref=GenBank:WP_003899934.1;Name=WP_003899934.1;Ontology_term=GO:0051536;gbkey=CDS;gene=amrS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217654.1;locus_tag=AL60_RS18885;product=AmmeMemoRadiSam system radical SAM enzyme;protein_id=WP_003899934.1;transl_table=11 NZ_KK316853.1 RefSeq gene 25086 26492 . + . ID=gene-AL60_RS18890;Name=AL60_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18890;old_locus_tag=AL60_02721 NZ_KK316853.1 Protein Homology CDS 25086 26492 . + 0 ID=cds-WP_003900638.1;Parent=gene-AL60_RS18890;Dbxref=GenBank:WP_003900638.1;Name=WP_003900638.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217655.1;locus_tag=AL60_RS18890;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003900638.1;transl_table=11 NZ_KK316853.1 RefSeq gene 26513 27718 . + . ID=gene-AL60_RS18895;Name=AL60_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18895;old_locus_tag=AL60_02722 NZ_KK316853.1 Protein Homology CDS 26513 27718 . + 0 ID=cds-WP_003899936.1;Parent=gene-AL60_RS18895;Dbxref=GenBank:WP_003899936.1;Name=WP_003899936.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217656.1;locus_tag=AL60_RS18895;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003899936.1;transl_table=11 NZ_KK316853.1 RefSeq gene 27818 28789 . + . ID=gene-AL60_RS18900;Name=AL60_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18900;old_locus_tag=AL60_02723 NZ_KK316853.1 Protein Homology CDS 27818 28789 . + 0 ID=cds-WP_003416403.1;Parent=gene-AL60_RS18900;Dbxref=GenBank:WP_003416403.1;Name=WP_003416403.1;Ontology_term=GO:0016491,GO:0016655,GO:0048038,GO:0070402;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217657.1;locus_tag=AL60_RS18900;product=NADPH:quinone oxidoreductase family protein;protein_id=WP_003416403.1;transl_table=11 NZ_KK316853.1 RefSeq gene 28841 29269 . - . ID=gene-AL60_RS18905;Name=AL60_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18905;old_locus_tag=AL60_02724 NZ_KK316853.1 Protein Homology CDS 28841 29269 . - 0 ID=cds-WP_003416407.1;Parent=gene-AL60_RS18905;Dbxref=GenBank:WP_003416407.1;Name=WP_003416407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217658.1;locus_tag=AL60_RS18905;product=DUF6188 family protein;protein_id=WP_003416407.1;transl_table=11 NZ_KK316853.1 RefSeq gene 29377 29778 . + . ID=gene-AL60_RS18910;Name=AL60_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18910;old_locus_tag=AL60_02725 NZ_KK316853.1 Protein Homology CDS 29377 29778 . + 0 ID=cds-WP_003416410.1;Parent=gene-AL60_RS18910;Dbxref=GenBank:WP_003416410.1;Name=WP_003416410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217659.1;locus_tag=AL60_RS18910;product=Rv3143 family two-component system response regulator;protein_id=WP_003416410.1;transl_table=11 NZ_KK316853.1 RefSeq gene 29811 31040 . - . ID=gene-AL60_RS18915;Name=AL60_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18915;old_locus_tag=AL60_02726 NZ_KK316853.1 Protein Homology CDS 29811 31040 . - 0 ID=cds-WP_003913805.1;Parent=gene-AL60_RS18915;Dbxref=GenBank:WP_003913805.1;Name=WP_003913805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177936.2;locus_tag=AL60_RS18915;product=PPE family protein;protein_id=WP_003913805.1;transl_table=11 NZ_KK316853.1 RefSeq gene 31405 31791 . + . ID=gene-AL60_RS18920;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=AL60_RS18920;old_locus_tag=AL60_02727 NZ_KK316853.1 Protein Homology CDS 31405 31791 . + 0 ID=cds-WP_003416417.1;Parent=gene-AL60_RS18920;Dbxref=GenBank:WP_003416417.1;Name=WP_003416417.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217661.1;locus_tag=AL60_RS18920;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_003416417.1;transl_table=11 NZ_KK316853.1 RefSeq gene 31800 32354 . + . ID=gene-AL60_RS18925;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=AL60_RS18925;old_locus_tag=AL60_02728 NZ_KK316853.1 Protein Homology CDS 31800 32354 . + 0 ID=cds-WP_003416420.1;Parent=gene-AL60_RS18925;Dbxref=GenBank:WP_003416420.1;Name=WP_003416420.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;gene=nuoB;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874821.1;locus_tag=AL60_RS18925;product=NuoB/complex I 20 kDa subunit family protein;protein_id=WP_003416420.1;transl_table=11 NZ_KK316853.1 RefSeq gene 32351 33061 . + . ID=gene-AL60_RS18930;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=AL60_RS18930;old_locus_tag=AL60_02729 NZ_KK316853.1 Protein Homology CDS 32351 33061 . + 0 ID=cds-WP_003416425.1;Parent=gene-AL60_RS18930;Dbxref=GenBank:WP_003416425.1;Name=WP_003416425.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217663.1;locus_tag=AL60_RS18930;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_003416425.1;transl_table=11 NZ_KK316853.1 RefSeq gene 33061 34383 . + . ID=gene-AL60_RS18935;Name=nuoD;gbkey=Gene;gene=nuoD;gene_biotype=protein_coding;locus_tag=AL60_RS18935;old_locus_tag=AL60_02730 NZ_KK316853.1 Protein Homology CDS 33061 34383 . + 0 ID=cds-WP_003416430.1;Parent=gene-AL60_RS18935;Dbxref=GenBank:WP_003416430.1;Name=WP_003416430.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoD;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217664.1;locus_tag=AL60_RS18935;product=NADH dehydrogenase (quinone) subunit D;protein_id=WP_003416430.1;transl_table=11 NZ_KK316853.1 RefSeq gene 34380 35138 . + . ID=gene-AL60_RS18940;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=AL60_RS18940;old_locus_tag=AL60_02731 NZ_KK316853.1 Protein Homology CDS 34380 35138 . + 0 ID=cds-WP_003416434.1;Parent=gene-AL60_RS18940;Dbxref=GenBank:WP_003416434.1;Name=WP_003416434.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217665.1;locus_tag=AL60_RS18940;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_003416434.1;transl_table=11 NZ_KK316853.1 RefSeq gene 35135 36472 . + . ID=gene-AL60_RS18945;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AL60_RS18945;old_locus_tag=AL60_02732 NZ_KK316853.1 Protein Homology CDS 35135 36472 . + 0 ID=cds-WP_003416439.1;Parent=gene-AL60_RS18945;Dbxref=GenBank:WP_003416439.1;Name=WP_003416439.1;Ontology_term=GO:0010181,GO:0050136,GO:0051287,GO:0051539;gbkey=CDS;gene=nuoF;go_function=FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217666.1;locus_tag=AL60_RS18945;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_003416439.1;transl_table=11 NZ_KK316853.1 RefSeq gene 36469 38889 . + . ID=gene-AL60_RS18950;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AL60_RS18950;old_locus_tag=AL60_02733 NZ_KK316853.1 Protein Homology CDS 36469 38889 . + 0 ID=cds-WP_003899937.1;Parent=gene-AL60_RS18950;Dbxref=GenBank:WP_003899937.1;Name=WP_003899937.1;Ontology_term=GO:0042773,GO:0008137,GO:0043546,GO:0051536,GO:0016020;gbkey=CDS;gene=nuoG;go_component=membrane|0016020||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,molybdopterin cofactor binding|0043546||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217667.1;locus_tag=AL60_RS18950;product=NADH-quinone oxidoreductase subunit G;protein_id=WP_003899937.1;transl_table=11 NZ_KK316853.1 RefSeq gene 39005 40237 . + . ID=gene-AL60_RS18955;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AL60_RS18955;old_locus_tag=AL60_02734 NZ_KK316853.1 Protein Homology CDS 39005 40237 . + 0 ID=cds-WP_003416445.1;Parent=gene-AL60_RS18955;Dbxref=GenBank:WP_003416445.1;Name=WP_003416445.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217668.1;locus_tag=AL60_RS18955;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_003416445.1;transl_table=11 NZ_KK316853.1 RefSeq gene 40230 40865 . + . ID=gene-AL60_RS18960;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AL60_RS18960;old_locus_tag=AL60_02735 NZ_KK316853.1 Protein Homology CDS 40230 40865 . + 0 ID=cds-WP_003899938.1;Parent=gene-AL60_RS18960;Dbxref=GenBank:WP_003899938.1;Name=WP_003899938.1;Ontology_term=GO:0016651;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217669.1;locus_tag=AL60_RS18960;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_003899938.1;transl_table=11 NZ_KK316853.1 RefSeq gene 40862 41650 . + . ID=gene-AL60_RS18965;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=AL60_RS18965;old_locus_tag=AL60_02736 NZ_KK316853.1 Protein Homology CDS 40862 41650 . + 0 ID=cds-WP_003416449.1;Parent=gene-AL60_RS18965;Dbxref=GenBank:WP_003416449.1;Name=WP_003416449.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217670.1;locus_tag=AL60_RS18965;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_003416449.1;transl_table=11 NZ_KK316853.1 RefSeq gene 41647 41946 . + . ID=gene-AL60_RS18970;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AL60_RS18970;old_locus_tag=AL60_02737 NZ_KK316853.1 Protein Homology CDS 41647 41946 . + 0 ID=cds-WP_003416452.1;Parent=gene-AL60_RS18970;Dbxref=GenBank:WP_003416452.1;Name=WP_003416452.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217671.1;locus_tag=AL60_RS18970;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_003416452.1;transl_table=11 NZ_KK316853.1 RefSeq gene 41957 43858 . + . ID=gene-AL60_RS18975;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=AL60_RS18975;old_locus_tag=AL60_02738 NZ_KK316853.1 Protein Homology CDS 41957 43858 . + 0 ID=cds-WP_003900642.1;Parent=gene-AL60_RS18975;Dbxref=GenBank:WP_003900642.1;Name=WP_003900642.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217672.1;locus_tag=AL60_RS18975;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_003900642.1;transl_table=11 NZ_KK316853.1 RefSeq gene 43855 45516 . + . ID=gene-AL60_RS18980;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=AL60_RS18980;old_locus_tag=AL60_02739 NZ_KK316853.1 Protein Homology CDS 43855 45516 . + 0 ID=cds-WP_012054343.1;Parent=gene-AL60_RS18980;Dbxref=GenBank:WP_012054343.1;Name=WP_012054343.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217673.1;locus_tag=AL60_RS18980;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_012054343.1;transl_table=11 NZ_KK316853.1 RefSeq gene 45513 47108 . + . ID=gene-AL60_RS18985;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=AL60_RS18985;old_locus_tag=AL60_02740 NZ_KK316853.1 Protein Homology CDS 45513 47108 . + 0 ID=cds-WP_003900644.1;Parent=gene-AL60_RS18985;Dbxref=GenBank:WP_003900644.1;Name=WP_003900644.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217674.1;locus_tag=AL60_RS18985;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_003900644.1;transl_table=11 NZ_KK316853.1 RefSeq gene 47114 48886 . - . ID=gene-AL60_RS18990;Name=AL60_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18990;old_locus_tag=AL60_02741 NZ_KK316853.1 Protein Homology CDS 47114 48886 . - 0 ID=cds-WP_003906993.1;Parent=gene-AL60_RS18990;Dbxref=GenBank:WP_003906993.1;Name=WP_003906993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177937.1;locus_tag=AL60_RS18990;product=PPE family protein;protein_id=WP_003906993.1;transl_table=11 NZ_KK316853.1 RefSeq gene 49061 49702 . - . ID=gene-AL60_RS18995;Name=AL60_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS18995;old_locus_tag=AL60_02742 NZ_KK316853.1 Protein Homology CDS 49061 49702 . - 0 ID=cds-WP_003416573.1;Parent=gene-AL60_RS18995;Dbxref=GenBank:WP_003416573.1;Name=WP_003416573.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217676.1;locus_tag=AL60_RS18995;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416573.1;transl_table=11 NZ_KK316853.1 RefSeq gene 49713 50861 . - . ID=gene-AL60_RS19000;Name=AL60_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19000;old_locus_tag=AL60_02743 NZ_KK316853.1 Protein Homology CDS 49713 50861 . - 0 ID=cds-WP_003900647.1;Parent=gene-AL60_RS19000;Dbxref=GenBank:WP_003900647.1;Name=WP_003900647.1;Ontology_term=GO:0005506,GO:0016705,GO:0051537;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217677.1;locus_tag=AL60_RS19000;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_003900647.1;transl_table=11 NZ_KK316853.1 RefSeq gene 50931 51368 . - . ID=gene-AL60_RS19005;Name=AL60_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19005;old_locus_tag=AL60_02744 NZ_KK316853.1 Protein Homology CDS 50931 51368 . - 0 ID=cds-WP_003900648.1;Parent=gene-AL60_RS19005;Dbxref=GenBank:WP_003900648.1;Name=WP_003900648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217678.1;locus_tag=AL60_RS19005;product=integral membrane protein;protein_id=WP_003900648.1;transl_table=11 NZ_KK316853.1 RefSeq gene 51365 52636 . - . ID=gene-AL60_RS19010;Name=AL60_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19010;old_locus_tag=AL60_02745 NZ_KK316853.1 Protein Homology CDS 51365 52636 . - 0 ID=cds-WP_003416584.1;Parent=gene-AL60_RS19010;Dbxref=GenBank:WP_003416584.1;Name=WP_003416584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217679.1;locus_tag=AL60_RS19010;product=DUF58 domain-containing protein;protein_id=WP_003416584.1;transl_table=11 NZ_KK316853.1 RefSeq gene 52666 53628 . - . ID=gene-AL60_RS19015;Name=AL60_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19015;old_locus_tag=AL60_02746 NZ_KK316853.1 Protein Homology CDS 52666 53628 . - 0 ID=cds-WP_003416588.1;Parent=gene-AL60_RS19015;Dbxref=GenBank:WP_003416588.1;Name=WP_003416588.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217680.1;locus_tag=AL60_RS19015;product=AAA family ATPase;protein_id=WP_003416588.1;transl_table=11 NZ_KK316853.1 RefSeq gene 53636 54118 . - . ID=gene-AL60_RS19020;Name=AL60_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19020;old_locus_tag=AL60_02747 NZ_KK316853.1 Protein Homology CDS 53636 54118 . - 0 ID=cds-WP_003416593.1;Parent=gene-AL60_RS19020;Dbxref=GenBank:WP_003416593.1;Name=WP_003416593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217681.1;locus_tag=AL60_RS19020;product=hypothetical protein;protein_id=WP_003416593.1;transl_table=11 NZ_KK316853.1 RefSeq gene 54115 55074 . - . ID=gene-AL60_RS19025;Name=AL60_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19025;old_locus_tag=AL60_02748 NZ_KK316853.1 Protein Homology CDS 54115 55074 . - 0 ID=cds-WP_003900649.1;Parent=gene-AL60_RS19025;Dbxref=GenBank:WP_003900649.1;Name=WP_003900649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217682.1;locus_tag=AL60_RS19025;product=DUF4129 domain-containing protein;protein_id=WP_003900649.1;transl_table=11 NZ_KK316853.1 RefSeq gene 55154 55780 . - . ID=gene-AL60_RS19030;Name=AL60_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19030;old_locus_tag=AL60_02749 NZ_KK316853.1 Protein Homology CDS 55154 55780 . - 0 ID=cds-WP_003416599.1;Parent=gene-AL60_RS19030;Dbxref=GenBank:WP_003416599.1;Name=WP_003416599.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217683.1;locus_tag=AL60_RS19030;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416599.1;transl_table=11 NZ_KK316853.1 RefSeq gene 55825 56961 . + . ID=gene-AL60_RS19035;Name=AL60_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19035;old_locus_tag=AL60_02750 NZ_KK316853.1 Protein Homology CDS 55825 56961 . + 0 ID=cds-WP_003900650.1;Parent=gene-AL60_RS19035;Dbxref=GenBank:WP_003900650.1;Name=WP_003900650.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217684.1;locus_tag=AL60_RS19035;product=phosphotransferase family protein;protein_id=WP_003900650.1;transl_table=11 NZ_KK316853.1 RefSeq gene 56961 58085 . + . ID=gene-AL60_RS19040;Name=AL60_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19040;old_locus_tag=AL60_02751 NZ_KK316853.1 Protein Homology CDS 56961 58085 . + 0 ID=cds-WP_003416605.1;Parent=gene-AL60_RS19040;Dbxref=GenBank:WP_003416605.1;Name=WP_003416605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217685.1;locus_tag=AL60_RS19040;product=Rv3169 family protein;protein_id=WP_003416605.1;transl_table=11 NZ_KK316853.1 RefSeq gene 58228 59574 . + . ID=gene-AL60_RS19045;Name=aofH;gbkey=Gene;gene=aofH;gene_biotype=protein_coding;locus_tag=AL60_RS19045;old_locus_tag=AL60_02752 NZ_KK316853.1 Protein Homology CDS 58228 59574 . + 0 ID=cds-WP_003416607.1;Parent=gene-AL60_RS19045;Dbxref=GenBank:WP_003416607.1;Name=WP_003416607.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;gene=aofH;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217686.1;locus_tag=AL60_RS19045;product=flavin monoamine oxidase family protein;protein_id=WP_003416607.1;transl_table=11 NZ_KK316853.1 RefSeq gene 59569 60540 . - . ID=gene-AL60_RS19050;Name=hpx;gbkey=Gene;gene=hpx;gene_biotype=protein_coding;locus_tag=AL60_RS19050;old_locus_tag=AL60_02753 NZ_KK316853.1 Protein Homology CDS 59569 60540 . - 0 ID=cds-WP_010924623.1;Parent=gene-AL60_RS19050;Dbxref=GenBank:WP_010924623.1;Name=WP_010924623.1;gbkey=CDS;gene=hpx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012393253.1;locus_tag=AL60_RS19050;product=alpha/beta fold hydrolase;protein_id=WP_010924623.1;transl_table=11 NZ_KK316853.1 RefSeq gene 60711 60890 . - . ID=gene-AL60_RS27200;Name=AL60_RS27200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27200 NZ_KK316853.1 Protein Homology CDS 60711 60890 . - 0 ID=cds-WP_003917749.1;Parent=gene-AL60_RS27200;Dbxref=GenBank:WP_003917749.1;Name=WP_003917749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917749.1;locus_tag=AL60_RS27200;product=hypothetical protein;protein_id=WP_003917749.1;transl_table=11 NZ_KK316853.1 RefSeq gene 61166 61768 . - . ID=gene-AL60_RS19055;Name=AL60_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19055;old_locus_tag=AL60_02755 NZ_KK316853.1 Protein Homology CDS 61166 61768 . - 0 ID=cds-WP_003416617.1;Parent=gene-AL60_RS19055;Dbxref=GenBank:WP_003416617.1;Name=WP_003416617.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217689.1;locus_tag=AL60_RS19055;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416617.1;transl_table=11 NZ_KK316853.1 RefSeq gene 61861 62568 . + . ID=gene-AL60_RS19060;Name=AL60_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19060;old_locus_tag=AL60_02756 NZ_KK316853.1 Protein Homology CDS 61861 62568 . + 0 ID=cds-WP_003900652.1;Parent=gene-AL60_RS19060;Dbxref=GenBank:WP_003900652.1;Name=WP_003900652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217690.1;locus_tag=AL60_RS19060;product=SDR family oxidoreductase;protein_id=WP_003900652.1;transl_table=11 NZ_KK316853.1 RefSeq gene 62583 64070 . + . ID=gene-AL60_RS19065;Name=AL60_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19065;old_locus_tag=AL60_02757 NZ_KK316853.1 Protein Homology CDS 62583 64070 . + 0 ID=cds-WP_003416624.1;Parent=gene-AL60_RS19065;Dbxref=GenBank:WP_003416624.1;Name=WP_003416624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217691.1;locus_tag=AL60_RS19065;product=amidase;protein_id=WP_003416624.1;transl_table=11 NZ_KK316853.1 RefSeq gene 64067 65023 . - . ID=gene-AL60_RS19070;Name=mesT;gbkey=Gene;gene=mesT;gene_biotype=protein_coding;locus_tag=AL60_RS19070;old_locus_tag=AL60_02758 NZ_KK316853.1 Protein Homology CDS 64067 65023 . - 0 ID=cds-WP_003416627.1;Parent=gene-AL60_RS19070;Dbxref=GenBank:WP_003416627.1;Name=WP_003416627.1;gbkey=CDS;gene=mesT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177938.1;locus_tag=AL60_RS19070;product=epoxide hydrolase MesT;protein_id=WP_003416627.1;transl_table=11 NZ_KK316853.1 RefSeq gene 65170 66030 . + . ID=gene-AL60_RS19075;Name=AL60_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19075;old_locus_tag=AL60_02759 NZ_KK316853.1 Protein Homology CDS 65170 66030 . + 0 ID=cds-WP_003416628.1;Parent=gene-AL60_RS19075;Dbxref=GenBank:WP_003416628.1;Name=WP_003416628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217693.1;locus_tag=AL60_RS19075;product=alpha/beta fold hydrolase;protein_id=WP_003416628.1;transl_table=11 NZ_KK316853.1 RefSeq gene 66005 66520 . + . ID=gene-AL60_RS19080;Name=AL60_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19080;old_locus_tag=AL60_02760 NZ_KK316853.1 Protein Homology CDS 66005 66520 . + 0 ID=cds-WP_003899950.1;Parent=gene-AL60_RS19080;Dbxref=GenBank:WP_003899950.1;Name=WP_003899950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899950.1;locus_tag=AL60_RS19080;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003899950.1;transl_table=11 NZ_KK316853.1 RefSeq pseudogene 66524 66747 . + . ID=gene-AL60_RS27625;Name=AL60_RS27625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27625;partial=true;pseudo=true;start_range=.,66524 NZ_KK316853.1 Protein Homology CDS 66524 66747 . + 0 ID=cds-AL60_RS27625;Parent=gene-AL60_RS27625;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011562696.1;locus_tag=AL60_RS27625;partial=true;product=(R)-hydratase;pseudo=true;start_range=.,66524;transl_table=11 NZ_KK316853.1 RefSeq gene 66760 67053 . + . ID=gene-AL60_RS0105085;Name=AL60_RS0105085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105085 NZ_KK316853.1 Protein Homology CDS 66760 67053 . + 0 ID=cds-WP_003416635.1;Parent=gene-AL60_RS0105085;Dbxref=GenBank:WP_003416635.1;Name=WP_003416635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030043.1;locus_tag=AL60_RS0105085;product=hypothetical protein;protein_id=WP_003416635.1;transl_table=11 NZ_KK316853.1 RefSeq gene 67341 68630 . + . ID=gene-AL60_RS19085;Name=AL60_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19085;old_locus_tag=AL60_02761 NZ_KK316853.1 Protein Homology CDS 67341 68630 . + 0 ID=cds-WP_003906996.1;Parent=gene-AL60_RS19085;Dbxref=GenBank:WP_003906996.1;Name=WP_003906996.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217695.1;locus_tag=AL60_RS19085;product=ATP-binding protein;protein_id=WP_003906996.1;transl_table=11 NZ_KK316853.1 RefSeq gene 68977 69411 . - . ID=gene-AL60_RS19090;Name=AL60_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19090;old_locus_tag=AL60_02762 NZ_KK316853.1 Protein Homology CDS 68977 69411 . - 0 ID=cds-WP_003899952.1;Parent=gene-AL60_RS19090;Dbxref=GenBank:WP_003899952.1;Name=WP_003899952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217696.1;locus_tag=AL60_RS19090;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003899952.1;transl_table=11 NZ_KK316853.1 RefSeq gene 69414 69866 . - . ID=gene-AL60_RS19095;Name=AL60_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19095;old_locus_tag=AL60_02763 NZ_KK316853.1 Protein Homology CDS 69414 69866 . - 0 ID=cds-WP_003899953.1;Parent=gene-AL60_RS19095;Dbxref=GenBank:WP_003899953.1;Name=WP_003899953.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217697.1;locus_tag=AL60_RS19095;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003899953.1;transl_table=11 NZ_KK316853.1 RefSeq gene 70097 70441 . + . ID=gene-AL60_RS19100;Name=AL60_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19100;old_locus_tag=AL60_02764 NZ_KK316853.1 Protein Homology CDS 70097 70441 . + 0 ID=cds-WP_003899954.1;Parent=gene-AL60_RS19100;Dbxref=GenBank:WP_003899954.1;Name=WP_003899954.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217698.1;locus_tag=AL60_RS19100;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003899954.1;transl_table=11 NZ_KK316853.1 RefSeq gene 70438 70767 . + . ID=gene-AL60_RS19105;Name=AL60_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19105;old_locus_tag=AL60_02765 NZ_KK316853.1 Protein Homology CDS 70438 70767 . + 0 ID=cds-WP_003899955.1;Parent=gene-AL60_RS19105;Dbxref=GenBank:WP_003899955.1;Name=WP_003899955.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217699.1;locus_tag=AL60_RS19105;product=helix-turn-helix domain-containing protein;protein_id=WP_003899955.1;transl_table=11 NZ_KK316853.1 RefSeq gene 70905 71145 . - . ID=gene-AL60_RS19110;Name=AL60_RS19110;end_range=71145,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19110;old_locus_tag=AL60_02766;partial=true NZ_KK316853.1 Protein Homology CDS 70905 71145 . - 1 ID=cds-WP_031651932.1;Parent=gene-AL60_RS19110;Dbxref=GenBank:WP_031651932.1;Name=WP_031651932.1;Ontology_term=GO:0015074;end_range=71145,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS19110;partial=true;product=integrase core domain-containing protein;protein_id=WP_031651932.1;transl_table=11 NZ_KK316853.1 RefSeq gene 72667 72963 . - . ID=gene-AL60_RS19115;Name=AL60_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19115;old_locus_tag=AL60_02767;partial=true;start_range=.,72667 NZ_KK316853.1 Protein Homology CDS 72667 72963 . - 0 ID=cds-WP_031655338.1;Parent=gene-AL60_RS19115;Dbxref=GenBank:WP_031655338.1;Name=WP_031655338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_284181008.1;locus_tag=AL60_RS19115;partial=true;product=IS3 family transposase;protein_id=WP_031655338.1;start_range=.,72667;transl_table=11 NZ_KK316853.1 RefSeq gene 73460 73807 . + . ID=gene-AL60_RS19120;Name=AL60_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19120;old_locus_tag=AL60_02768 NZ_KK316853.1 Protein Homology CDS 73460 73807 . + 0 ID=cds-WP_003899956.1;Parent=gene-AL60_RS19120;Dbxref=GenBank:WP_003899956.1;Name=WP_003899956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217704.1;locus_tag=AL60_RS19120;product=antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein;protein_id=WP_003899956.1;transl_table=11 NZ_KK316853.1 RefSeq gene 73804 74424 . + . ID=gene-AL60_RS19125;Name=AL60_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19125;old_locus_tag=AL60_02769 NZ_KK316853.1 Protein Homology CDS 73804 74424 . + 0 ID=cds-WP_003899957.1;Parent=gene-AL60_RS19125;Dbxref=GenBank:WP_003899957.1;Name=WP_003899957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217705.1;locus_tag=AL60_RS19125;product=RES family NAD+ phosphorylase;protein_id=WP_003899957.1;transl_table=11 NZ_KK316853.1 RefSeq gene 74584 75849 . - . ID=gene-AL60_RS19130;Name=AL60_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19130;old_locus_tag=AL60_02770 NZ_KK316853.1 Protein Homology CDS 74584 75849 . - 0 ID=cds-WP_003902423.1;Parent=gene-AL60_RS19130;Dbxref=GenBank:WP_003902423.1;Name=WP_003902423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217706.1;locus_tag=AL60_RS19130;product=hypothetical protein;protein_id=WP_003902423.1;transl_table=11 NZ_KK316853.1 RefSeq gene 76017 76226 . + . ID=gene-AL60_RS19135;Name=AL60_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19135;old_locus_tag=AL60_02771 NZ_KK316853.1 Protein Homology CDS 76017 76226 . + 0 ID=cds-WP_003416778.1;Parent=gene-AL60_RS19135;Dbxref=GenBank:WP_003416778.1;Name=WP_003416778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411905.1;locus_tag=AL60_RS19135;product=hypothetical protein;protein_id=WP_003416778.1;transl_table=11 NZ_KK316853.1 RefSeq gene 76261 76446 . + . ID=gene-AL60_RS0105090;Name=AL60_RS0105090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105090 NZ_KK316853.1 Protein Homology CDS 76261 76446 . + 0 ID=cds-WP_003908177.1;Parent=gene-AL60_RS0105090;Dbxref=GenBank:WP_003908177.1;Name=WP_003908177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908177.1;locus_tag=AL60_RS0105090;product=hypothetical protein;protein_id=WP_003908177.1;transl_table=11 NZ_KK316853.1 RefSeq gene 76473 77729 . - . ID=gene-AL60_RS19140;Name=AL60_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19140;old_locus_tag=AL60_02772 NZ_KK316853.1 Protein Homology CDS 76473 77729 . - 0 ID=cds-WP_434738401.1;Parent=gene-AL60_RS19140;Dbxref=GenBank:WP_434738401.1;Name=WP_434738401.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899959.1;locus_tag=AL60_RS19140;product=IS30 family transposase;protein_id=WP_434738401.1;transl_table=11 NZ_KK316853.1 RefSeq gene 77791 78015 . - . ID=gene-AL60_RS0105095;Name=AL60_RS0105095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105095 NZ_KK316853.1 Protein Homology CDS 77791 78015 . - 0 ID=cds-WP_003416790.1;Parent=gene-AL60_RS0105095;Dbxref=GenBank:WP_003416790.1;Name=WP_003416790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909838.1;locus_tag=AL60_RS0105095;product=hypothetical protein;protein_id=WP_003416790.1;transl_table=11 NZ_KK316853.1 RefSeq gene 78529 78605 . - . ID=gene-AL60_RS19145;Name=AL60_RS19145;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS19145;old_locus_tag=AL60_02773 NZ_KK316853.1 tRNAscan-SE tRNA 78529 78605 . - . ID=rna-AL60_RS19145;Parent=gene-AL60_RS19145;anticodon=(pos:complement(78569..78571));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS19145;product=tRNA-Met NZ_KK316853.1 tRNAscan-SE exon 78529 78605 . - . ID=exon-AL60_RS19145-1;Parent=rna-AL60_RS19145;anticodon=(pos:complement(78569..78571));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS19145;product=tRNA-Met NZ_KK316853.1 RefSeq gene 78725 79186 . + . ID=gene-AL60_RS19150;Name=AL60_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19150;old_locus_tag=AL60_02774 NZ_KK316853.1 Protein Homology CDS 78725 79186 . + 0 ID=cds-WP_003416793.1;Parent=gene-AL60_RS19150;Dbxref=GenBank:WP_003416793.1;Name=WP_003416793.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: protein motif:HMM:NF012517.6;locus_tag=AL60_RS19150;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_003416793.1;transl_table=11 NZ_KK316853.1 RefSeq gene 79356 82334 . - . ID=gene-AL60_RS19155;Name=AL60_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19155;old_locus_tag=AL60_02775 NZ_KK316853.1 Protein Homology CDS 79356 82334 . - 0 ID=cds-WP_031721514.1;Parent=gene-AL60_RS19155;Dbxref=GenBank:WP_031721514.1;Name=WP_031721514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217709.1;locus_tag=AL60_RS19155;product=UPF0182 family protein;protein_id=WP_031721514.1;transl_table=11 NZ_KK316853.1 RefSeq gene 82426 83448 . - . ID=gene-AL60_RS19160;Name=AL60_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19160;old_locus_tag=AL60_02776 NZ_KK316853.1 Protein Homology CDS 82426 83448 . - 0 ID=cds-WP_003416799.1;Parent=gene-AL60_RS19160;Dbxref=GenBank:WP_003416799.1;Name=WP_003416799.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0005524;gbkey=CDS;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217710.1;locus_tag=AL60_RS19160;product=YlbL family protein;protein_id=WP_003416799.1;transl_table=11 NZ_KK316853.1 RefSeq gene 83526 84944 . + . ID=gene-AL60_RS19165;Name=AL60_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19165;old_locus_tag=AL60_02777 NZ_KK316853.1 Protein Homology CDS 83526 84944 . + 0 ID=cds-WP_012054345.1;Parent=gene-AL60_RS19165;Dbxref=GenBank:WP_012054345.1;Name=WP_012054345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217711.1;locus_tag=AL60_RS19165;product=zinc-dependent metalloprotease;protein_id=WP_012054345.1;transl_table=11 NZ_KK316853.1 RefSeq gene 84983 85849 . + . ID=gene-AL60_RS19170;Name=AL60_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19170;old_locus_tag=AL60_02778 NZ_KK316853.1 Protein Homology CDS 84983 85849 . + 0 ID=cds-WP_021082912.1;Parent=gene-AL60_RS19170;Dbxref=GenBank:WP_021082912.1;Name=WP_021082912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014383154.1;locus_tag=AL60_RS19170;product=hypothetical protein;protein_id=WP_021082912.1;transl_table=11 NZ_KK316853.1 RefSeq gene 85858 86031 . - . ID=gene-AL60_RS19175;Name=AL60_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19175;old_locus_tag=AL60_02779 NZ_KK316853.1 Protein Homology CDS 85858 86031 . - 0 ID=cds-WP_015456486.1;Parent=gene-AL60_RS19175;Dbxref=GenBank:WP_015456486.1;Name=WP_015456486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012393233.1;locus_tag=AL60_RS19175;product=hypothetical protein;protein_id=WP_015456486.1;transl_table=11 NZ_KK316853.1 RefSeq gene 86186 87529 . + . ID=gene-AL60_RS19180;Name=AL60_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19180;old_locus_tag=AL60_02780 NZ_KK316853.1 Protein Homology CDS 86186 87529 . + 0 ID=cds-WP_003416815.1;Parent=gene-AL60_RS19180;Dbxref=GenBank:WP_003416815.1;Name=WP_003416815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217713.1;locus_tag=AL60_RS19180;product=macrolide-binding ATPase MABP-1;protein_id=WP_003416815.1;transl_table=11 NZ_KK316853.1 RefSeq gene 87563 87841 . - . ID=gene-AL60_RS19185;Name=whiB7;gbkey=Gene;gene=whiB7;gene_biotype=protein_coding;locus_tag=AL60_RS19185;old_locus_tag=AL60_02781 NZ_KK316853.1 Protein Homology CDS 87563 87841 . - 0 ID=cds-WP_003899963.1;Parent=gene-AL60_RS19185;Dbxref=GenBank:WP_003899963.1;Name=WP_003899963.1;gbkey=CDS;gene=whiB7;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177940.1;locus_tag=AL60_RS19185;product=transcriptional regulator WhiB7;protein_id=WP_003899963.1;transl_table=11 NZ_KK316853.1 RefSeq gene 88271 90373 . - . ID=gene-AL60_RS19190;Name=uvrD2;gbkey=Gene;gene=uvrD2;gene_biotype=protein_coding;locus_tag=AL60_RS19190;old_locus_tag=AL60_02782 NZ_KK316853.1 Protein Homology CDS 88271 90373 . - 0 ID=cds-WP_003416822.1;Parent=gene-AL60_RS19190;Dbxref=GenBank:WP_003416822.1;Name=WP_003416822.1;gbkey=CDS;gene=uvrD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217714.1;locus_tag=AL60_RS19190;product=ATP-dependent DNA helicase UvrD2;protein_id=WP_003416822.1;transl_table=11 NZ_KK316853.1 RefSeq gene 90497 90751 . + . ID=gene-AL60_RS19195;Name=mrx1;gbkey=Gene;gene=mrx1;gene_biotype=protein_coding;locus_tag=AL60_RS19195;old_locus_tag=AL60_02783 NZ_KK316853.1 Protein Homology CDS 90497 90751 . + 0 ID=cds-WP_003416827.1;Parent=gene-AL60_RS19195;Dbxref=GenBank:WP_003416827.1;Name=WP_003416827.1;gbkey=CDS;gene=mrx1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177941.1;locus_tag=AL60_RS19195;product=mycoredoxin Mrx1;protein_id=WP_003416827.1;transl_table=11 NZ_KK316853.1 RefSeq gene 90764 91705 . - . ID=gene-AL60_RS19200;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=AL60_RS19200;old_locus_tag=AL60_02784 NZ_KK316853.1 Protein Homology CDS 90764 91705 . - 0 ID=cds-WP_003899965.1;Parent=gene-AL60_RS19200;Dbxref=GenBank:WP_003899965.1;Name=WP_003899965.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217715.1;locus_tag=AL60_RS19200;product=NAD(+) diphosphatase;protein_id=WP_003899965.1;transl_table=11 NZ_KK316853.1 RefSeq gene 91764 92831 . - . ID=gene-AL60_RS19205;Name=AL60_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19205;old_locus_tag=AL60_02785 NZ_KK316853.1 Protein Homology CDS 91764 92831 . - 0 ID=cds-WP_003899966.1;Parent=gene-AL60_RS19205;Dbxref=GenBank:WP_003899966.1;Name=WP_003899966.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217716.1;locus_tag=AL60_RS19205;product=potassium channel family protein;protein_id=WP_003899966.1;transl_table=11 NZ_KK316853.1 RefSeq gene 92893 96198 . - . ID=gene-AL60_RS19210;Name=adnB;gbkey=Gene;gene=adnB;gene_biotype=protein_coding;locus_tag=AL60_RS19210;old_locus_tag=AL60_02786 NZ_KK316853.1 Protein Homology CDS 92893 96198 . - 0 ID=cds-WP_003416833.1;Parent=gene-AL60_RS19210;Dbxref=GenBank:WP_003416833.1;Name=WP_003416833.1;gbkey=CDS;gene=adnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217717.1;locus_tag=AL60_RS19210;product=ATP-dependent DNA helicase AdnB;protein_id=WP_003416833.1;transl_table=11 NZ_KK316853.1 RefSeq gene 96195 99362 . - . ID=gene-AL60_RS19215;Name=adnA;gbkey=Gene;gene=adnA;gene_biotype=protein_coding;locus_tag=AL60_RS19215;old_locus_tag=AL60_02787 NZ_KK316853.1 Protein Homology CDS 96195 99362 . - 0 ID=cds-WP_003899967.1;Parent=gene-AL60_RS19215;Dbxref=GenBank:WP_003899967.1;Name=WP_003899967.1;gbkey=CDS;gene=adnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217718.1;locus_tag=AL60_RS19215;product=ATP-dependent DNA helicase AdnA;protein_id=WP_003899967.1;transl_table=11 NZ_KK316853.1 RefSeq gene 99448 99657 . + . ID=gene-AL60_RS19220;Name=AL60_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19220;old_locus_tag=AL60_02788 NZ_KK316853.1 Protein Homology CDS 99448 99657 . + 0 ID=cds-WP_003907005.1;Parent=gene-AL60_RS19220;Dbxref=GenBank:WP_003907005.1;Name=WP_003907005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030044.1;locus_tag=AL60_RS19220;product=hypothetical protein;protein_id=WP_003907005.1;transl_table=11 NZ_KK316853.1 RefSeq gene 99688 100473 . + . ID=gene-AL60_RS19225;Name=lipV;gbkey=Gene;gene=lipV;gene_biotype=protein_coding;locus_tag=AL60_RS19225;old_locus_tag=AL60_02789 NZ_KK316853.1 Protein Homology CDS 99688 100473 . + 0 ID=cds-WP_012054346.1;Parent=gene-AL60_RS19225;Dbxref=GenBank:WP_012054346.1;Name=WP_012054346.1;gbkey=CDS;gene=lipV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899968.1;locus_tag=AL60_RS19225;product=lipase LipV;protein_id=WP_012054346.1;transl_table=11 NZ_KK316853.1 RefSeq gene 100476 100781 . + . ID=gene-AL60_RS19230;Name=AL60_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19230;old_locus_tag=AL60_02790 NZ_KK316853.1 Protein Homology CDS 100476 100781 . + 0 ID=cds-WP_003416847.1;Parent=gene-AL60_RS19230;Dbxref=GenBank:WP_003416847.1;Name=WP_003416847.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217720.1;locus_tag=AL60_RS19230;product=MGMT family protein;protein_id=WP_003416847.1;transl_table=11 NZ_KK316853.1 RefSeq gene 100788 101642 . - . ID=gene-AL60_RS19235;Name=AL60_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19235;old_locus_tag=AL60_02791 NZ_KK316853.1 Protein Homology CDS 100788 101642 . - 0 ID=cds-WP_003416850.1;Parent=gene-AL60_RS19235;Dbxref=GenBank:WP_003416850.1;Name=WP_003416850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014712234.1;locus_tag=AL60_RS19235;product=TIGR02569 family protein;protein_id=WP_003416850.1;transl_table=11 NZ_KK316853.1 RefSeq gene 101693 102871 . - . ID=gene-AL60_RS19240;Name=moeZ;gbkey=Gene;gene=moeZ;gene_biotype=protein_coding;locus_tag=AL60_RS19240;old_locus_tag=AL60_02792 NZ_KK316853.1 Protein Homology CDS 101693 102871 . - 0 ID=cds-WP_003416855.1;Parent=gene-AL60_RS19240;Dbxref=GenBank:WP_003416855.1;Name=WP_003416855.1;Ontology_term=GO:0008641;gbkey=CDS;gene=moeZ;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177942.1;locus_tag=AL60_RS19240;product=adenylyltransferase/sulfurtransferase MoeZ;protein_id=WP_003416855.1;transl_table=11 NZ_KK316853.1 RefSeq gene 102962 103990 . - . ID=gene-AL60_RS19245;Name=AL60_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19245;old_locus_tag=AL60_02793 NZ_KK316853.1 Protein Homology CDS 102962 103990 . - 0 ID=cds-WP_003899970.1;Parent=gene-AL60_RS19245;Dbxref=GenBank:WP_003899970.1;Name=WP_003899970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899970.1;locus_tag=AL60_RS19245;product=DUF3152 domain-containing protein;protein_id=WP_003899970.1;transl_table=11 NZ_KK316853.1 RefSeq gene 104165 104851 . + . ID=gene-AL60_RS19250;Name=AL60_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19250;old_locus_tag=AL60_02794 NZ_KK316853.1 Protein Homology CDS 104165 104851 . + 0 ID=cds-WP_003416861.1;Parent=gene-AL60_RS19250;Dbxref=GenBank:WP_003416861.1;Name=WP_003416861.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217724.1;locus_tag=AL60_RS19250;product=HTH-type transcriptional activator FasR;protein_id=WP_003416861.1;transl_table=11 NZ_KK316853.1 RefSeq gene 104838 105110 . - . ID=gene-AL60_RS19255;Name=AL60_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19255;old_locus_tag=AL60_02795 NZ_KK316853.1 Protein Homology CDS 104838 105110 . - 0 ID=cds-WP_003416863.1;Parent=gene-AL60_RS19255;Dbxref=GenBank:WP_003416863.1;Name=WP_003416863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177943.1;locus_tag=AL60_RS19255;product=DUF3107 domain-containing protein;protein_id=WP_003416863.1;transl_table=11 NZ_KK316853.1 RefSeq gene 105435 105995 . + . ID=gene-AL60_RS19260;Name=AL60_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19260;old_locus_tag=AL60_02796 NZ_KK316853.1 Protein Homology CDS 105435 105995 . + 0 ID=cds-WP_003416868.1;Parent=gene-AL60_RS19260;Dbxref=GenBank:WP_003416868.1;Name=WP_003416868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217725.1;locus_tag=AL60_RS19260;product=MmpS family transport accessory protein;protein_id=WP_003416868.1;transl_table=11 NZ_KK316853.1 RefSeq gene 106005 106700 . - . ID=gene-AL60_RS19265;Name=AL60_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19265;old_locus_tag=AL60_02797 NZ_KK316853.1 Protein Homology CDS 106005 106700 . - 0 ID=cds-WP_003416873.1;Parent=gene-AL60_RS19265;Dbxref=GenBank:WP_003416873.1;Name=WP_003416873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217726.1;locus_tag=AL60_RS19265;product=ferritin-like fold-containing protein;protein_id=WP_003416873.1;transl_table=11 NZ_KK316853.1 RefSeq gene 106959 108542 . + . ID=gene-AL60_RS19270;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=AL60_RS19270;old_locus_tag=AL60_02798 NZ_KK316853.1 Protein Homology CDS 106959 108542 . + 0 ID=cds-WP_003416875.1;Parent=gene-AL60_RS19270;Dbxref=GenBank:WP_003416875.1;Name=WP_003416875.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;gene=rhlE;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217727.1;locus_tag=AL60_RS19270;product=DEAD/DEAH box helicase;protein_id=WP_003416875.1;transl_table=11 NZ_KK316853.1 RefSeq gene 108555 109778 . + . ID=gene-AL60_RS19275;Name=AL60_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19275;old_locus_tag=AL60_02799 NZ_KK316853.1 Protein Homology CDS 108555 109778 . + 0 ID=cds-WP_003416876.1;Parent=gene-AL60_RS19275;Dbxref=GenBank:WP_003416876.1;Name=WP_003416876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217728.1;locus_tag=AL60_RS19275;product=Rv3212 family protein;protein_id=WP_003416876.1;transl_table=11 NZ_KK316853.1 RefSeq gene 109854 110654 . - . ID=gene-AL60_RS19280;Name=AL60_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19280;old_locus_tag=AL60_02800 NZ_KK316853.1 Protein Homology CDS 109854 110654 . - 0 ID=cds-WP_003901572.1;Parent=gene-AL60_RS19280;Dbxref=GenBank:WP_003901572.1;Name=WP_003901572.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217729.1;locus_tag=AL60_RS19280;product=ParA family protein;protein_id=WP_003901572.1;transl_table=11 NZ_KK316853.1 RefSeq gene 110808 111419 . + . ID=gene-AL60_RS19285;Name=AL60_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19285;old_locus_tag=AL60_02801 NZ_KK316853.1 Protein Homology CDS 110808 111419 . + 0 ID=cds-WP_003416878.1;Parent=gene-AL60_RS19285;Dbxref=GenBank:WP_003416878.1;Name=WP_003416878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177944.1;locus_tag=AL60_RS19285;product=acid phosphatase;protein_id=WP_003416878.1;transl_table=11 NZ_KK316853.1 RefSeq gene 111416 112534 . + . ID=gene-AL60_RS19290;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=AL60_RS19290;old_locus_tag=AL60_02802 NZ_KK316853.1 Protein Homology CDS 111416 112534 . + 0 ID=cds-WP_003416879.1;Parent=gene-AL60_RS19290;Dbxref=GenBank:WP_003416879.1;Name=WP_003416879.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217731.1;locus_tag=AL60_RS19290;product=isochorismate synthase;protein_id=WP_003416879.1;transl_table=11 NZ_KK316853.1 RefSeq pseudogene 112531 113014 . + . ID=gene-AL60_RS0105100;Name=AL60_RS0105100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0105100;old_locus_tag=AL60_02803;pseudo=true NZ_KK316853.1 Protein Homology CDS 112531 113014 . + 0 ID=cds-AL60_RS0105100;Parent=gene-AL60_RS0105100;Note=frameshifted;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725920.1;locus_tag=AL60_RS0105100;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_KK316853.1 RefSeq gene 112966 113397 . - . ID=gene-AL60_RS19295;Name=AL60_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19295;old_locus_tag=AL60_02804 NZ_KK316853.1 Protein Homology CDS 112966 113397 . - 0 ID=cds-WP_003907009.1;Parent=gene-AL60_RS19295;Dbxref=GenBank:WP_003907009.1;Name=WP_003907009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217733.1;locus_tag=AL60_RS19295;product=hypothetical protein;protein_id=WP_003907009.1;transl_table=11 NZ_KK316853.1 RefSeq gene 113630 114595 . + . ID=gene-AL60_RS19300;Name=AL60_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19300;old_locus_tag=AL60_02805 NZ_KK316853.1 Protein Homology CDS 113630 114595 . + 0 ID=cds-WP_003416883.1;Parent=gene-AL60_RS19300;Dbxref=GenBank:WP_003416883.1;Name=WP_003416883.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217734.1;locus_tag=AL60_RS19300;product=diacylglycerol/lipid kinase family protein;protein_id=WP_003416883.1;transl_table=11 NZ_KK316853.1 RefSeq gene 114888 115142 . + . ID=gene-AL60_RS19305;Name=whiB1;gbkey=Gene;gene=whiB1;gene_biotype=protein_coding;locus_tag=AL60_RS19305;old_locus_tag=AL60_02806 NZ_KK316853.1 Protein Homology CDS 114888 115142 . + 0 ID=cds-WP_003416884.1;Parent=gene-AL60_RS19305;Dbxref=GenBank:WP_003416884.1;Name=WP_003416884.1;gbkey=CDS;gene=whiB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416884.1;locus_tag=AL60_RS19305;product=transcriptional regulator WhiB1;protein_id=WP_003416884.1;transl_table=11 NZ_KK316853.1 RefSeq gene 115204 116709 . - . ID=gene-AL60_RS19310;Name=AL60_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19310;old_locus_tag=AL60_02807 NZ_KK316853.1 Protein Homology CDS 115204 116709 . - 0 ID=cds-WP_003416886.1;Parent=gene-AL60_RS19310;Dbxref=GenBank:WP_003416886.1;Name=WP_003416886.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217736.1;locus_tag=AL60_RS19310;product=sensor histidine kinase;protein_id=WP_003416886.1;transl_table=11 NZ_KK316853.1 RefSeq gene 116726 116941 . - . ID=gene-AL60_RS19315;Name=AL60_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19315;old_locus_tag=AL60_02808 NZ_KK316853.1 Protein Homology CDS 116726 116941 . - 0 ID=cds-WP_003416887.1;Parent=gene-AL60_RS19315;Dbxref=GenBank:WP_003416887.1;Name=WP_003416887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217737.1;locus_tag=AL60_RS19315;product=biotin/lipoyl-binding carrier protein;protein_id=WP_003416887.1;transl_table=11 NZ_KK316853.1 RefSeq gene 117142 117216 . + . ID=gene-AL60_RS28185;Name=AL60_RS28185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28185 NZ_KK316853.1 Protein Homology CDS 117142 117216 . + 0 ID=cds-WP_003416889.1;Parent=gene-AL60_RS28185;Dbxref=GenBank:WP_003416889.1;Name=WP_003416889.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_149429506.1;locus_tag=AL60_RS28185;product=50S ribosomal protein bL37;protein_id=WP_003416889.1;transl_table=11 NZ_KK316853.1 RefSeq gene 117226 117531 . - . ID=gene-AL60_RS19320;Name=rsrA;gbkey=Gene;gene=rsrA;gene_biotype=protein_coding;locus_tag=AL60_RS19320;old_locus_tag=AL60_02809 NZ_KK316853.1 Protein Homology CDS 117226 117531 . - 0 ID=cds-WP_003416891.1;Parent=gene-AL60_RS19320;Dbxref=GenBank:WP_003416891.1;Name=WP_003416891.1;Ontology_term=GO:0045454,GO:0016989;gbkey=CDS;gene=rsrA;go_function=sigma factor antagonist activity|0016989||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177945.1;locus_tag=AL60_RS19320;product=mycothiol system anti-sigma-R factor;protein_id=WP_003416891.1;transl_table=11 NZ_KK316853.1 RefSeq gene 117528 118079 . - . ID=gene-AL60_RS19325;Name=AL60_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19325;old_locus_tag=AL60_02810 NZ_KK316853.1 Protein Homology CDS 117528 118079 . - 0 ID=cds-WP_003899976.1;Parent=gene-AL60_RS19325;Dbxref=GenBank:WP_003899976.1;Name=WP_003899976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217738.1;locus_tag=AL60_RS19325;product=hypothetical protein;protein_id=WP_003899976.1;transl_table=11 NZ_KK316853.1 RefSeq gene 118076 118726 . - . ID=gene-AL60_RS19330;Name=sigH;gbkey=Gene;gene=sigH;gene_biotype=protein_coding;locus_tag=AL60_RS19330;old_locus_tag=AL60_02811 NZ_KK316853.1 Protein Homology CDS 118076 118726 . - 0 ID=cds-WP_003416897.1;Parent=gene-AL60_RS19330;Dbxref=GenBank:WP_003416897.1;Name=WP_003416897.1;gbkey=CDS;gene=sigH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217739.1;locus_tag=AL60_RS19330;product=sigma-70 family RNA polymerase sigma factor SigH;protein_id=WP_003416897.1;transl_table=11 NZ_KK316853.1 RefSeq gene 119026 119874 . + . ID=gene-AL60_RS19335;Name=AL60_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19335;old_locus_tag=AL60_02812 NZ_KK316853.1 Protein Homology CDS 119026 119874 . + 0 ID=cds-WP_003416899.1;Parent=gene-AL60_RS19335;Dbxref=GenBank:WP_003416899.1;Name=WP_003416899.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217740.1;locus_tag=AL60_RS19335;product=SDR family oxidoreductase;protein_id=WP_003416899.1;transl_table=11 NZ_KK316853.1 RefSeq gene 119810 119998 . + . ID=gene-AL60_RS27980;Name=AL60_RS27980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27980;old_locus_tag=AL60_02813 NZ_KK316853.1 Protein Homology CDS 119810 119998 . + 0 ID=cds-WP_012054348.1;Parent=gene-AL60_RS27980;Dbxref=GenBank:WP_012054348.1;Name=WP_012054348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294273.1;locus_tag=AL60_RS27980;product=hypothetical protein;protein_id=WP_012054348.1;transl_table=11 NZ_KK316853.1 RefSeq gene 119976 120194 . + . ID=gene-AL60_RS19345;Name=AL60_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19345;old_locus_tag=AL60_02814 NZ_KK316853.1 Protein Homology CDS 119976 120194 . + 0 ID=cds-WP_003416902.1;Parent=gene-AL60_RS19345;Dbxref=GenBank:WP_003416902.1;Name=WP_003416902.1;Ontology_term=GO:0002161;gbkey=CDS;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416902.1;locus_tag=AL60_RS19345;product=YbaK/EbsC family protein;protein_id=WP_003416902.1;transl_table=11 NZ_KK316853.1 RefSeq gene 120191 121615 . - . ID=gene-AL60_RS19350;Name=AL60_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19350;old_locus_tag=AL60_02815 NZ_KK316853.1 Protein Homology CDS 120191 121615 . - 0 ID=cds-WP_003899979.1;Parent=gene-AL60_RS19350;Dbxref=GenBank:WP_003899979.1;Name=WP_003899979.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217742.1;locus_tag=AL60_RS19350;product=GNAT family N-acetyltransferase;protein_id=WP_003899979.1;transl_table=11 NZ_KK316853.1 RefSeq gene 121739 122497 . - . ID=gene-AL60_RS19355;Name=AL60_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19355;old_locus_tag=AL60_02816 NZ_KK316853.1 Protein Homology CDS 121739 122497 . - 0 ID=cds-WP_003416907.1;Parent=gene-AL60_RS19355;Dbxref=GenBank:WP_003416907.1;Name=WP_003416907.1;Ontology_term=GO:0009432,GO:0003697,GO:0008233;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,peptidase activity|0008233||IEA;go_process=SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217743.1;locus_tag=AL60_RS19355;product=SOS response-associated peptidase;protein_id=WP_003416907.1;transl_table=11 NZ_KK316853.1 RefSeq gene 122552 123904 . + . ID=gene-AL60_RS19360;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AL60_RS19360;old_locus_tag=AL60_02817 NZ_KK316853.1 Protein Homology CDS 122552 123904 . + 0 ID=cds-WP_003416914.1;Parent=gene-AL60_RS19360;Dbxref=GenBank:WP_003416914.1;Name=WP_003416914.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217744.1;locus_tag=AL60_RS19360;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_003416914.1;transl_table=11 NZ_KK316853.1 RefSeq gene 123901 124893 . + . ID=gene-AL60_RS19365;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AL60_RS19365;old_locus_tag=AL60_02818 NZ_KK316853.1 Protein Homology CDS 123901 124893 . + 0 ID=cds-WP_003416916.1;Parent=gene-AL60_RS19365;Dbxref=GenBank:WP_003416916.1;Name=WP_003416916.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217745.1;locus_tag=AL60_RS19365;product=ribosome small subunit-dependent GTPase A;protein_id=WP_003416916.1;transl_table=11 NZ_KK316853.1 RefSeq gene 124926 126209 . - . ID=gene-AL60_RS19370;Name=desA3;gbkey=Gene;gene=desA3;gene_biotype=protein_coding;locus_tag=AL60_RS19370;old_locus_tag=AL60_02819 NZ_KK316853.1 Protein Homology CDS 124926 126209 . - 0 ID=cds-WP_003416919.1;Parent=gene-AL60_RS19370;Dbxref=GenBank:WP_003416919.1;Name=WP_003416919.1;gbkey=CDS;gene=desA3;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177948.1;locus_tag=AL60_RS19370;product=NADPH-dependent stearoyl-CoA 9-desaturase;protein_id=WP_003416919.1;transl_table=11 NZ_KK316853.1 RefSeq gene 126287 127429 . - . ID=gene-AL60_RS19375;Name=AL60_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19375;old_locus_tag=AL60_02820 NZ_KK316853.1 Protein Homology CDS 126287 127429 . - 0 ID=cds-WP_003416922.1;Parent=gene-AL60_RS19375;Dbxref=GenBank:WP_003416922.1;Name=WP_003416922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217747.1;locus_tag=AL60_RS19375;product=NADPH oxidoreductase;protein_id=WP_003416922.1;transl_table=11 NZ_KK316853.1 RefSeq gene 127539 128048 . - . ID=gene-AL60_RS19380;Name=AL60_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19380;old_locus_tag=AL60_02821 NZ_KK316853.1 Protein Homology CDS 127539 128048 . - 0 ID=cds-WP_003416925.1;Parent=gene-AL60_RS19380;Dbxref=GenBank:WP_003416925.1;Name=WP_003416925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217748.1;locus_tag=AL60_RS19380;product=DUF6912 family protein;protein_id=WP_003416925.1;transl_table=11 NZ_KK316853.1 RefSeq gene 128045 128911 . - . ID=gene-AL60_RS19385;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=AL60_RS19385;old_locus_tag=AL60_02822 NZ_KK316853.1 Protein Homology CDS 128045 128911 . - 0 ID=cds-WP_009938021.1;Parent=gene-AL60_RS19385;Dbxref=GenBank:WP_009938021.1;Name=WP_009938021.1;Ontology_term=GO:0006793,GO:0008976;gbkey=CDS;gene=ppk2;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020788356.1;locus_tag=AL60_RS19385;product=polyphosphate kinase 2;protein_id=WP_009938021.1;transl_table=11 NZ_KK316853.1 RefSeq pseudogene 128956 130364 . - . ID=gene-AL60_RS27630;Name=AL60_RS27630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27630;pseudo=true NZ_KK316853.1 Protein Homology CDS 128956 130364 . - 0 ID=cds-AL60_RS27630;Parent=gene-AL60_RS27630;Note=frameshifted;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001636.1;locus_tag=AL60_RS27630;product=WS/DGAT/MGAT family O-acyltransferase;pseudo=true;transl_table=11 NZ_KK316853.1 RefSeq gene 130565 131116 . + . ID=gene-AL60_RS19390;Name=AL60_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19390;old_locus_tag=AL60_02825 NZ_KK316853.1 Protein Homology CDS 130565 131116 . + 0 ID=cds-WP_003912151.1;Parent=gene-AL60_RS19390;Dbxref=GenBank:WP_003912151.1;Name=WP_003912151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291303.1;locus_tag=AL60_RS19390;product=Rv3235 family protein;protein_id=WP_003912151.1;transl_table=11 NZ_KK316853.1 RefSeq gene 131134 132291 . - . ID=gene-AL60_RS19395;Name=AL60_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19395;old_locus_tag=AL60_02826 NZ_KK316853.1 Protein Homology CDS 131134 132291 . - 0 ID=cds-WP_003416933.1;Parent=gene-AL60_RS19395;Dbxref=GenBank:WP_003416933.1;Name=WP_003416933.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177949.1;locus_tag=AL60_RS19395;product=cation:proton antiporter;protein_id=WP_003416933.1;transl_table=11 NZ_KK316853.1 RefSeq gene 132296 132778 . - . ID=gene-AL60_RS19400;Name=AL60_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19400;old_locus_tag=AL60_02827 NZ_KK316853.1 Protein Homology CDS 132296 132778 . - 0 ID=cds-WP_003899982.1;Parent=gene-AL60_RS19400;Dbxref=GenBank:WP_003899982.1;Name=WP_003899982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217754.1;locus_tag=AL60_RS19400;product=cation:proton antiporter regulatory subunit;protein_id=WP_003899982.1;transl_table=11 NZ_KK316853.1 RefSeq gene 132839 133573 . - . ID=gene-AL60_RS19405;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=AL60_RS19405;old_locus_tag=AL60_02828 NZ_KK316853.1 Protein Homology CDS 132839 133573 . - 0 ID=cds-WP_003416945.1;Parent=gene-AL60_RS19405;Dbxref=GenBank:WP_003416945.1;Name=WP_003416945.1;Ontology_term=GO:0008168;gbkey=CDS;gene=mddA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217755.1;locus_tag=AL60_RS19405;product=methanethiol S-methyltransferase;protein_id=WP_003416945.1;transl_table=11 NZ_KK316853.1 RefSeq gene 133632 136778 . - . ID=gene-AL60_RS19410;Name=AL60_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19410;old_locus_tag=AL60_02829 NZ_KK316853.1 Protein Homology CDS 133632 136778 . - 0 ID=cds-WP_003900661.1;Parent=gene-AL60_RS19410;Dbxref=GenBank:WP_003900661.1;Name=WP_003900661.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217756.1;locus_tag=AL60_RS19410;product=MFS transporter;protein_id=WP_003900661.1;transl_table=11 NZ_KK316853.1 RefSeq gene 136857 139706 . - . ID=gene-AL60_RS19415;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AL60_RS19415;old_locus_tag=AL60_02830 NZ_KK316853.1 Protein Homology CDS 136857 139706 . - 0 ID=cds-WP_003901576.1;Parent=gene-AL60_RS19415;Dbxref=GenBank:WP_003901576.1;Name=WP_003901576.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177950.1;locus_tag=AL60_RS19415;product=preprotein translocase subunit SecA;protein_id=WP_003901576.1;transl_table=11 NZ_KK316853.1 RefSeq gene 139785 140429 . - . ID=gene-AL60_RS19420;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=AL60_RS19420;old_locus_tag=AL60_02831 NZ_KK316853.1 Protein Homology CDS 139785 140429 . - 0 ID=cds-WP_003416957.1;Parent=gene-AL60_RS19420;Dbxref=GenBank:WP_003416957.1;Name=WP_003416957.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217758.3;locus_tag=AL60_RS19420;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_003416957.1;transl_table=11 NZ_KK316853.1 RefSeq gene 140745 141386 . - . ID=gene-AL60_RS19425;Name=AL60_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19425;old_locus_tag=AL60_02832 NZ_KK316853.1 Protein Homology CDS 140745 141386 . - 0 ID=cds-WP_003416963.1;Parent=gene-AL60_RS19425;Dbxref=GenBank:WP_003416963.1;Name=WP_003416963.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217759.1;locus_tag=AL60_RS19425;product=ComF family protein;protein_id=WP_003416963.1;transl_table=11 NZ_KK316853.1 RefSeq gene 141424 142266 . - . ID=gene-AL60_RS19430;Name=AL60_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19430;old_locus_tag=AL60_02833 NZ_KK316853.1 Protein Homology CDS 141424 142266 . - 0 ID=cds-WP_003416966.1;Parent=gene-AL60_RS19430;Dbxref=GenBank:WP_003416966.1;Name=WP_003416966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217760.1;locus_tag=AL60_RS19430;product=LmeA family phospholipid-binding protein;protein_id=WP_003416966.1;transl_table=11 NZ_KK316853.1 RefSeq gene 142334 144085 . - . ID=gene-AL60_RS19435;Name=lpqB;gbkey=Gene;gene=lpqB;gene_biotype=protein_coding;locus_tag=AL60_RS19435;old_locus_tag=AL60_02834 NZ_KK316853.1 Protein Homology CDS 142334 144085 . - 0 ID=cds-WP_003901578.1;Parent=gene-AL60_RS19435;Dbxref=GenBank:WP_003901578.1;Name=WP_003901578.1;gbkey=CDS;gene=lpqB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217761.1;locus_tag=AL60_RS19435;product=MtrAB system accessory lipoprotein LpqB;protein_id=WP_003901578.1;transl_table=11 NZ_KK316853.1 RefSeq gene 144085 145788 . - . ID=gene-AL60_RS19440;Name=mtrB;gbkey=Gene;gene=mtrB;gene_biotype=protein_coding;locus_tag=AL60_RS19440;old_locus_tag=AL60_02835 NZ_KK316853.1 Protein Homology CDS 144085 145788 . - 0 ID=cds-WP_003416988.1;Parent=gene-AL60_RS19440;Dbxref=GenBank:WP_003416988.1;Name=WP_003416988.1;gbkey=CDS;gene=mtrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217762.1;locus_tag=AL60_RS19440;product=two-component system sensor histidine kinase MtrB;protein_id=WP_003416988.1;transl_table=11 NZ_KK316853.1 RefSeq gene 145838 146524 . - . ID=gene-AL60_RS19445;Name=mtrA;gbkey=Gene;gene=mtrA;gene_biotype=protein_coding;locus_tag=AL60_RS19445;old_locus_tag=AL60_02836 NZ_KK316853.1 Protein Homology CDS 145838 146524 . - 0 ID=cds-WP_003899985.1;Parent=gene-AL60_RS19445;Dbxref=GenBank:WP_003899985.1;Name=WP_003899985.1;gbkey=CDS;gene=mtrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217763.1;locus_tag=AL60_RS19445;product=two-component system response regulator MtrA;protein_id=WP_003899985.1;transl_table=11 NZ_KK316853.1 RefSeq pseudogene 146594 147244 . - . ID=gene-AL60_RS19450;Name=tmk;end_range=147244,.;gbkey=Gene;gene=tmk;gene_biotype=pseudogene;locus_tag=AL60_RS19450;old_locus_tag=AL60_02837;partial=true;pseudo=true NZ_KK316853.1 Protein Homology CDS 146594 147244 . - 0 ID=cds-AL60_RS19450;Parent=gene-AL60_RS19450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006233,GO:0004798,GO:0005524;end_range=147244,.;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217764.1;locus_tag=AL60_RS19450;partial=true;product=dTMP kinase;pseudo=true;transl_table=11 NZ_KK316853.1 RefSeq gene 147335 148822 . - . ID=gene-AL60_RS19455;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=AL60_RS19455;old_locus_tag=AL60_02838 NZ_KK316853.1 Protein Homology CDS 147335 148822 . - 0 ID=cds-WP_003417039.1;Parent=gene-AL60_RS19455;Dbxref=GenBank:WP_003417039.1;Name=WP_003417039.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217765.1;locus_tag=AL60_RS19455;product=adenosylhomocysteinase;protein_id=WP_003417039.1;transl_table=11 NZ_KK316853.1 RefSeq gene 148927 149562 . - . ID=gene-AL60_RS19460;Name=alkX;gbkey=Gene;gene=alkX;gene_biotype=protein_coding;locus_tag=AL60_RS19460;old_locus_tag=AL60_02839 NZ_KK316853.1 Protein Homology CDS 148927 149562 . - 0 ID=cds-WP_003417042.1;Parent=gene-AL60_RS19460;Dbxref=GenBank:WP_003417042.1;Name=WP_003417042.1;gbkey=CDS;gene=alkX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217766.1;locus_tag=AL60_RS19460;product=TetR family transcriptional regulator AlkX;protein_id=WP_003417042.1;transl_table=11 NZ_KK316853.1 RefSeq gene 149559 149741 . - . ID=gene-AL60_RS19465;Name=rubB;gbkey=Gene;gene=rubB;gene_biotype=protein_coding;locus_tag=AL60_RS19465;old_locus_tag=AL60_02840 NZ_KK316853.1 Protein Homology CDS 149559 149741 . - 0 ID=cds-WP_003417044.1;Parent=gene-AL60_RS19465;Dbxref=GenBank:WP_003417044.1;Name=WP_003417044.1;gbkey=CDS;gene=rubB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217767.1;locus_tag=AL60_RS19465;product=rubredoxin RubB;protein_id=WP_003417044.1;transl_table=11 NZ_KK316853.1 RefSeq gene 149746 149913 . - . ID=gene-AL60_RS19470;Name=rubA;gbkey=Gene;gene=rubA;gene_biotype=protein_coding;locus_tag=AL60_RS19470;old_locus_tag=AL60_02841 NZ_KK316853.1 Protein Homology CDS 149746 149913 . - 0 ID=cds-WP_003417045.1;Parent=gene-AL60_RS19470;Dbxref=GenBank:WP_003417045.1;Name=WP_003417045.1;Ontology_term=GO:0043448,GO:0005506,GO:0009055;gbkey=CDS;gene=rubA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=alkane catabolic process|0043448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217768.1;locus_tag=AL60_RS19470;product=rubredoxin;protein_id=WP_003417045.1;transl_table=11 NZ_KK316853.1 RefSeq gene 149913 151163 . - . ID=gene-AL60_RS19475;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=AL60_RS19475;old_locus_tag=AL60_02842 NZ_KK316853.1 Protein Homology CDS 149913 151163 . - 0 ID=cds-WP_003417047.1;Parent=gene-AL60_RS19475;Dbxref=GenBank:WP_003417047.1;Name=WP_003417047.1;Ontology_term=GO:0016491;gbkey=CDS;gene=alkB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217769.1;locus_tag=AL60_RS19475;product=alkane 1-monooxygenase;protein_id=WP_003417047.1;transl_table=11 NZ_KK316853.1 RefSeq gene 151272 152759 . - . ID=gene-AL60_RS19480;Name=AL60_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19480;old_locus_tag=AL60_02843 NZ_KK316853.1 Protein Homology CDS 151272 152759 . - 0 ID=cds-WP_003417049.1;Parent=gene-AL60_RS19480;Dbxref=GenBank:WP_003417049.1;Name=WP_003417049.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217770.1;locus_tag=AL60_RS19480;product=amino acid permease;protein_id=WP_003417049.1;transl_table=11 NZ_KK316853.1 RefSeq gene 152850 154238 . + . ID=gene-AL60_RS19485;Name=AL60_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19485;old_locus_tag=AL60_02844 NZ_KK316853.1 Protein Homology CDS 152850 154238 . + 0 ID=cds-WP_003417051.1;Parent=gene-AL60_RS19485;Dbxref=GenBank:WP_003417051.1;Name=WP_003417051.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217771.1;locus_tag=AL60_RS19485;product=FAD-dependent oxidoreductase;protein_id=WP_003417051.1;transl_table=11 NZ_KK316853.1 RefSeq gene 154216 155442 . - . ID=gene-AL60_RS19490;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=AL60_RS19490;old_locus_tag=AL60_02845 NZ_KK316853.1 Protein Homology CDS 154216 155442 . - 0 ID=cds-WP_003417054.1;Parent=gene-AL60_RS19490;Dbxref=GenBank:WP_003417054.1;Name=WP_003417054.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217772.1;locus_tag=AL60_RS19490;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_003417054.1;transl_table=11 NZ_KK316853.1 RefSeq gene 155450 156490 . - . ID=gene-AL60_RS19495;Name=AL60_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19495;old_locus_tag=AL60_02846 NZ_KK316853.1 Protein Homology CDS 155450 156490 . - 0 ID=cds-WP_003417056.1;Parent=gene-AL60_RS19495;Dbxref=GenBank:WP_003417056.1;Name=WP_003417056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217773.1;locus_tag=AL60_RS19495;product=hypothetical protein;protein_id=WP_003417056.1;transl_table=11 NZ_KK316853.1 RefSeq gene 156487 157884 . - . ID=gene-AL60_RS19500;Name=pmmA;gbkey=Gene;gene=pmmA;gene_biotype=protein_coding;locus_tag=AL60_RS19500;old_locus_tag=AL60_02847 NZ_KK316853.1 Protein Homology CDS 156487 157884 . - 0 ID=cds-WP_003899989.1;Parent=gene-AL60_RS19500;Dbxref=GenBank:WP_003899989.1;Name=WP_003899989.1;Ontology_term=GO:0005975,GO:0016868;gbkey=CDS;gene=pmmA;go_function=intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217774.1;locus_tag=AL60_RS19500;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_003899989.1;transl_table=11 NZ_KK316853.1 RefSeq gene 157986 158426 . - . ID=gene-AL60_RS19505;Name=AL60_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19505;old_locus_tag=AL60_02848 NZ_KK316853.1 Protein Homology CDS 157986 158426 . - 0 ID=cds-WP_180744027.1;Parent=gene-AL60_RS19505;Dbxref=GenBank:WP_180744027.1;Name=WP_180744027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014208879.1;locus_tag=AL60_RS19505;product=DUF3499 domain-containing protein;protein_id=WP_180744027.1;transl_table=11 NZ_KK316853.1 RefSeq gene 158600 159019 . + . ID=gene-AL60_RS19510;Name=AL60_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19510;old_locus_tag=AL60_02849 NZ_KK316853.1 Protein Homology CDS 158600 159019 . + 0 ID=cds-WP_003417076.1;Parent=gene-AL60_RS19510;Dbxref=GenBank:WP_003417076.1;Name=WP_003417076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217776.1;locus_tag=AL60_RS19510;product=metallopeptidase family protein;protein_id=WP_003417076.1;transl_table=11 NZ_KK316853.1 RefSeq gene 159047 159391 . - . ID=gene-AL60_RS0105120;Name=AL60_RS0105120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105120;old_locus_tag=AL60_02850 NZ_KK316853.1 Protein Homology CDS 159047 159391 . - 0 ID=cds-WP_003900662.1;Parent=gene-AL60_RS0105120;Dbxref=GenBank:WP_003900662.1;Name=WP_003900662.1;Ontology_term=GO:0003677,GO:0046872,GO:0051536,GO:0051539;gbkey=CDS;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725952.1;locus_tag=AL60_RS0105120;product=WhiB family transcriptional regulator;protein_id=WP_003900662.1;transl_table=11 NZ_KK316853.1 RefSeq gene 159718 160713 . + . ID=gene-AL60_RS19515;Name=cofD;gbkey=Gene;gene=cofD;gene_biotype=protein_coding;locus_tag=AL60_RS19515;old_locus_tag=AL60_02851 NZ_KK316853.1 Protein Homology CDS 159718 160713 . + 0 ID=cds-WP_003417087.1;Parent=gene-AL60_RS19515;Dbxref=GenBank:WP_003417087.1;Name=WP_003417087.1;Ontology_term=GO:0000287,GO:0043743;gbkey=CDS;gene=cofD;go_function=magnesium ion binding|0000287||IEA,LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217778.1;locus_tag=AL60_RS19515;product=2-phospho-L-lactate transferase;protein_id=WP_003417087.1;transl_table=11 NZ_KK316853.1 RefSeq gene 160710 162056 . + . ID=gene-AL60_RS19520;Name=fbiB;gbkey=Gene;gene=fbiB;gene_biotype=protein_coding;locus_tag=AL60_RS19520;old_locus_tag=AL60_02852 NZ_KK316853.1 Protein Homology CDS 160710 162056 . + 0 ID=cds-WP_003900663.1;Parent=gene-AL60_RS19520;Dbxref=GenBank:WP_003900663.1;Name=WP_003900663.1;Ontology_term=GO:0043773,GO:0046872;gbkey=CDS;gene=fbiB;go_function=coenzyme F420-0 gamma-glutamyl ligase activity|0043773||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217779.1;locus_tag=AL60_RS19520;product=coenzyme F420-0:L-glutamate ligase;protein_id=WP_003900663.1;transl_table=11 NZ_KK316853.1 RefSeq gene 162352 164013 . + . ID=gene-AL60_RS19525;Name=AL60_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19525;old_locus_tag=AL60_02853 NZ_KK316853.1 Protein Homology CDS 162352 164013 . + 0 ID=cds-WP_003417095.1;Parent=gene-AL60_RS19525;Dbxref=GenBank:WP_003417095.1;Name=WP_003417095.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217780.1;locus_tag=AL60_RS19525;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=WP_003417095.1;transl_table=11 NZ_KK316853.1 RefSeq gene 164073 165152 . - . ID=gene-AL60_RS19530;Name=manB;gbkey=Gene;gene=manB;gene_biotype=protein_coding;locus_tag=AL60_RS19530;old_locus_tag=AL60_02854 NZ_KK316853.1 Protein Homology CDS 164073 165152 . - 0 ID=cds-WP_003417097.1;Parent=gene-AL60_RS19530;Dbxref=GenBank:WP_003417097.1;Name=WP_003417097.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;gene=manB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177951.1;locus_tag=AL60_RS19530;product=mannose-1-phosphate guanylyltransferase;protein_id=WP_003417097.1;transl_table=11 NZ_KK316853.1 RefSeq gene 165154 166059 . - . ID=gene-AL60_RS19535;Name=wbbL;gbkey=Gene;gene=wbbL;gene_biotype=protein_coding;locus_tag=AL60_RS19535;old_locus_tag=AL60_02855 NZ_KK316853.1 Protein Homology CDS 165154 166059 . - 0 ID=cds-WP_003901582.1;Parent=gene-AL60_RS19535;Dbxref=GenBank:WP_003901582.1;Name=WP_003901582.1;gbkey=CDS;gene=wbbL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177952.3;locus_tag=AL60_RS19535;product=N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase;protein_id=WP_003901582.1;transl_table=11 NZ_KK316853.1 RefSeq gene 166070 166984 . - . ID=gene-AL60_RS19540;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=AL60_RS19540;old_locus_tag=AL60_02856 NZ_KK316853.1 Protein Homology CDS 166070 166984 . - 0 ID=cds-WP_003899993.1;Parent=gene-AL60_RS19540;Dbxref=GenBank:WP_003899993.1;Name=WP_003899993.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217783.1;locus_tag=AL60_RS19540;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_003899993.1;transl_table=11 NZ_KK316853.1 RefSeq gene 167060 168556 . + . ID=gene-AL60_RS19545;Name=lcp1;gbkey=Gene;gene=lcp1;gene_biotype=protein_coding;locus_tag=AL60_RS19545;old_locus_tag=AL60_02857 NZ_KK316853.1 Protein Homology CDS 167060 168556 . + 0 ID=cds-WP_003417107.1;Parent=gene-AL60_RS19545;Dbxref=GenBank:WP_003417107.1;Name=WP_003417107.1;gbkey=CDS;gene=lcp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217784.1;locus_tag=AL60_RS19545;product=arabinogalactan--peptidoglycan phosphotransferase Lcp1;protein_id=WP_003417107.1;transl_table=11 NZ_KK316853.1 RefSeq gene 168544 169284 . + . ID=gene-AL60_RS19550;Name=AL60_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19550;old_locus_tag=AL60_02858 NZ_KK316853.1 Protein Homology CDS 168544 169284 . + 0 ID=cds-WP_003899994.1;Parent=gene-AL60_RS19550;Dbxref=GenBank:WP_003899994.1;Name=WP_003899994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899994.1;locus_tag=AL60_RS19550;product=TIGR03089 family protein;protein_id=WP_003899994.1;transl_table=11 NZ_KK316853.1 RefSeq gene 169409 169690 . + . ID=gene-AL60_RS19555;Name=AL60_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19555;old_locus_tag=AL60_02859 NZ_KK316853.1 Protein Homology CDS 169409 169690 . + 0 ID=cds-WP_003417115.1;Parent=gene-AL60_RS19555;Dbxref=GenBank:WP_003417115.1;Name=WP_003417115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217786.1;locus_tag=AL60_RS19555;product=DUF1490 family protein;protein_id=WP_003417115.1;transl_table=11 NZ_KK316853.1 RefSeq gene 169701 171857 . + . ID=gene-AL60_RS19560;Name=ctpC;gbkey=Gene;gene=ctpC;gene_biotype=protein_coding;locus_tag=AL60_RS19560;old_locus_tag=AL60_02860 NZ_KK316853.1 Protein Homology CDS 169701 171857 . + 0 ID=cds-WP_003899995.1;Parent=gene-AL60_RS19560;Dbxref=GenBank:WP_003899995.1;Name=WP_003899995.1;gbkey=CDS;gene=ctpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217787.1;locus_tag=AL60_RS19560;product=manganese-exporting P-type ATPase CtpC;protein_id=WP_003899995.1;transl_table=11 NZ_KK316853.1 RefSeq gene 171854 172522 . - . ID=gene-AL60_RS19565;Name=AL60_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19565;old_locus_tag=AL60_02861 NZ_KK316853.1 Protein Homology CDS 171854 172522 . - 0 ID=cds-WP_003417119.1;Parent=gene-AL60_RS19565;Dbxref=GenBank:WP_003417119.1;Name=WP_003417119.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217788.1;locus_tag=AL60_RS19565;product=cation efflux transmembrane domain-containing protein;protein_id=WP_003417119.1;transl_table=11 NZ_KK316853.1 RefSeq gene 172623 173807 . + . ID=gene-AL60_RS19570;Name=AL60_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19570;old_locus_tag=AL60_02862 NZ_KK316853.1 Protein Homology CDS 172623 173807 . + 0 ID=cds-WP_003417120.1;Parent=gene-AL60_RS19570;Dbxref=GenBank:WP_003417120.1;Name=WP_003417120.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217789.1;locus_tag=AL60_RS19570;product=CoA transferase;protein_id=WP_003417120.1;transl_table=11 NZ_KK316853.1 RefSeq gene 173836 176106 . + . ID=gene-AL60_RS19575;Name=AL60_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19575;old_locus_tag=AL60_02863 NZ_KK316853.1 Protein Homology CDS 173836 176106 . + 0 ID=cds-WP_003917141.1;Parent=gene-AL60_RS19575;Dbxref=GenBank:WP_003917141.1;Name=WP_003917141.1;Ontology_term=GO:1902358,GO:0015116,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303796.1;locus_tag=AL60_RS19575;product=SulP family inorganic anion transporter;protein_id=WP_003917141.1;transl_table=11 NZ_KK316853.1 RefSeq gene 176095 177264 . - . ID=gene-AL60_RS19580;Name=AL60_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19580;old_locus_tag=AL60_02864 NZ_KK316853.1 Protein Homology CDS 176095 177264 . - 0 ID=cds-WP_003417122.1;Parent=gene-AL60_RS19580;Dbxref=GenBank:WP_003417122.1;Name=WP_003417122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217791.1;locus_tag=AL60_RS19580;product=acyl-CoA dehydrogenase;protein_id=WP_003417122.1;transl_table=11 NZ_KK316853.1 RefSeq gene 177289 177813 . - . ID=gene-AL60_RS19585;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AL60_RS19585;old_locus_tag=AL60_02865 NZ_KK316853.1 Protein Homology CDS 177289 177813 . - 0 ID=cds-WP_003899997.1;Parent=gene-AL60_RS19585;Dbxref=GenBank:WP_003899997.1;Name=WP_003899997.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217792.1;locus_tag=AL60_RS19585;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_003899997.1;transl_table=11 NZ_KK316853.1 RefSeq gene 177810 179099 . - . ID=gene-AL60_RS19590;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=AL60_RS19590;old_locus_tag=AL60_02866 NZ_KK316853.1 Protein Homology CDS 177810 179099 . - 0 ID=cds-WP_003417126.1;Parent=gene-AL60_RS19590;Dbxref=GenBank:WP_003417126.1;Name=WP_003417126.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217793.1;locus_tag=AL60_RS19590;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_003417126.1;transl_table=11 NZ_KK316853.1 RefSeq gene 179200 179871 . + . ID=gene-AL60_RS19595;Name=AL60_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19595;old_locus_tag=AL60_02867 NZ_KK316853.1 Protein Homology CDS 179200 179871 . + 0 ID=cds-WP_003417128.1;Parent=gene-AL60_RS19595;Dbxref=GenBank:WP_003417128.1;Name=WP_003417128.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874529.1;locus_tag=AL60_RS19595;product=GtrA family protein;protein_id=WP_003417128.1;transl_table=11 NZ_KK316853.1 RefSeq gene 179826 180344 . - . ID=gene-AL60_RS19600;Name=AL60_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19600;old_locus_tag=AL60_02868 NZ_KK316853.1 Protein Homology CDS 179826 180344 . - 0 ID=cds-WP_003417130.1;Parent=gene-AL60_RS19600;Dbxref=GenBank:WP_003417130.1;Name=WP_003417130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217795.1;locus_tag=AL60_RS19600;product=PH domain-containing protein;protein_id=WP_003417130.1;transl_table=11 NZ_KK316853.1 RefSeq gene 180387 181187 . - . ID=gene-AL60_RS19605;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=AL60_RS19605;old_locus_tag=AL60_02869 NZ_KK316853.1 Protein Homology CDS 180387 181187 . - 0 ID=cds-WP_003899999.1;Parent=gene-AL60_RS19605;Dbxref=GenBank:WP_003899999.1;Name=WP_003899999.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217796.1;locus_tag=AL60_RS19605;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_003899999.1;transl_table=11 NZ_KK316853.1 RefSeq gene 181237 182883 . + . ID=gene-AL60_RS19610;Name=AL60_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19610;old_locus_tag=AL60_02870 NZ_KK316853.1 Protein Homology CDS 181237 182883 . + 0 ID=cds-WP_003417136.1;Parent=gene-AL60_RS19610;Dbxref=GenBank:WP_003417136.1;Name=WP_003417136.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217797.1;locus_tag=AL60_RS19610;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003417136.1;transl_table=11 NZ_KK316853.1 RefSeq gene 182864 183397 . + . ID=gene-AL60_RS19615;Name=AL60_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19615;old_locus_tag=AL60_02871 NZ_KK316853.1 Protein Homology CDS 182864 183397 . + 0 ID=cds-WP_010886160.1;Parent=gene-AL60_RS19615;Dbxref=GenBank:WP_010886160.1;Name=WP_010886160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217798.1;locus_tag=AL60_RS19615;product=acyl-CoA carboxylase subunit epsilon;protein_id=WP_010886160.1;transl_table=11 NZ_KK316853.1 RefSeq gene 183394 184062 . + . ID=gene-AL60_RS19620;Name=AL60_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19620;old_locus_tag=AL60_02872 NZ_KK316853.1 Protein Homology CDS 183394 184062 . + 0 ID=cds-WP_003417146.1;Parent=gene-AL60_RS19620;Dbxref=GenBank:WP_003417146.1;Name=WP_003417146.1;Ontology_term=GO:0009117,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217799.1;locus_tag=AL60_RS19620;product=nucleoside triphosphate pyrophosphatase;protein_id=WP_003417146.1;transl_table=11 NZ_KK316853.1 RefSeq gene 184103 184996 . + . ID=gene-AL60_RS19625;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=AL60_RS19625;old_locus_tag=AL60_02873 NZ_KK316853.1 Protein Homology CDS 184103 184996 . + 0 ID=cds-WP_003417149.1;Parent=gene-AL60_RS19625;Dbxref=GenBank:WP_003417149.1;Name=WP_003417149.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;gene=sseA;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217800.1;locus_tag=AL60_RS19625;product=sulfurtransferase;protein_id=WP_003417149.1;transl_table=11 NZ_KK316853.1 RefSeq gene 184993 185424 . + . ID=gene-AL60_RS19630;Name=AL60_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19630;old_locus_tag=AL60_02874 NZ_KK316853.1 Protein Homology CDS 184993 185424 . + 0 ID=cds-WP_003417152.1;Parent=gene-AL60_RS19630;Dbxref=GenBank:WP_003417152.1;Name=WP_003417152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217801.1;locus_tag=AL60_RS19630;product=SufE family protein;protein_id=WP_003417152.1;transl_table=11 NZ_KK316853.1 RefSeq gene 185532 187334 . + . ID=gene-AL60_RS19635;Name=AL60_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19635;old_locus_tag=AL60_02875 NZ_KK316853.1 Protein Homology CDS 185532 187334 . + 0 ID=cds-WP_003417156.1;Parent=gene-AL60_RS19635;Dbxref=GenBank:WP_003417156.1;Name=WP_003417156.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217802.1;locus_tag=AL60_RS19635;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_003417156.1;transl_table=11 NZ_KK316853.1 RefSeq gene 187344 188129 . - . ID=gene-AL60_RS19640;Name=sigF;gbkey=Gene;gene=sigF;gene_biotype=protein_coding;locus_tag=AL60_RS19640;old_locus_tag=AL60_02876 NZ_KK316853.1 Protein Homology CDS 187344 188129 . - 0 ID=cds-WP_003417158.1;Parent=gene-AL60_RS19640;Dbxref=GenBank:WP_003417158.1;Name=WP_003417158.1;gbkey=CDS;gene=sigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217803.1;locus_tag=AL60_RS19640;product=RNA polymerase sigma factor SigF;protein_id=WP_003417158.1;transl_table=11 NZ_KK316853.1 RefSeq gene 188126 188563 . - . ID=gene-AL60_RS19645;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=AL60_RS19645;old_locus_tag=AL60_02877 NZ_KK316853.1 Protein Homology CDS 188126 188563 . - 0 ID=cds-WP_003417160.1;Parent=gene-AL60_RS19645;Dbxref=GenBank:WP_003417160.1;Name=WP_003417160.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217804.4;locus_tag=AL60_RS19645;product=anti-sigma B factor RsbW;protein_id=WP_003417160.1;transl_table=11 NZ_KK316853.1 RefSeq gene 188761 189072 . - . ID=gene-AL60_RS0105135;Name=usfY;gbkey=Gene;gene=usfY;gene_biotype=protein_coding;locus_tag=AL60_RS0105135;old_locus_tag=AL60_02878 NZ_KK316853.1 Protein Homology CDS 188761 189072 . - 0 ID=cds-WP_003900003.1;Parent=gene-AL60_RS0105135;Dbxref=GenBank:WP_003900003.1;Name=WP_003900003.1;gbkey=CDS;gene=usfY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900003.1;locus_tag=AL60_RS0105135;product=protein UsfY;protein_id=WP_003900003.1;transl_table=11 NZ_KK316853.1 RefSeq gene 189209 189586 . - . ID=gene-AL60_RS19650;Name=AL60_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19650;old_locus_tag=AL60_02879 NZ_KK316853.1 Protein Homology CDS 189209 189586 . - 0 ID=cds-WP_003417165.1;Parent=gene-AL60_RS19650;Dbxref=GenBank:WP_003417165.1;Name=WP_003417165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217806.1;locus_tag=AL60_RS19650;product=hypothetical protein;protein_id=WP_003417165.1;transl_table=11 NZ_KK316853.1 RefSeq gene 189620 190969 . - . ID=gene-AL60_RS19655;Name=lat;gbkey=Gene;gene=lat;gene_biotype=protein_coding;locus_tag=AL60_RS19655;old_locus_tag=AL60_02880 NZ_KK316853.1 Protein Homology CDS 189620 190969 . - 0 ID=cds-WP_003900004.1;Parent=gene-AL60_RS19655;Dbxref=GenBank:WP_003900004.1;Name=WP_003900004.1;Ontology_term=GO:0017000,GO:0030170,GO:0045484;gbkey=CDS;gene=lat;go_function=pyridoxal phosphate binding|0030170||IEA,L-lysine 6-transaminase activity|0045484||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217807.1;locus_tag=AL60_RS19655;product=L-lysine 6-transaminase;protein_id=WP_003900004.1;transl_table=11 NZ_KK316853.1 RefSeq gene 191020 191472 . - . ID=gene-AL60_RS19660;Name=lrpA;gbkey=Gene;gene=lrpA;gene_biotype=protein_coding;locus_tag=AL60_RS19660;old_locus_tag=AL60_02881 NZ_KK316853.1 Protein Homology CDS 191020 191472 . - 0 ID=cds-WP_003417179.1;Parent=gene-AL60_RS19660;Dbxref=GenBank:WP_003417179.1;Name=WP_003417179.1;gbkey=CDS;gene=lrpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217808.1;locus_tag=AL60_RS19660;product=transcriptional regulator LrpA;protein_id=WP_003417179.1;transl_table=11 NZ_KK316853.1 RefSeq gene 191503 192750 . + . ID=gene-AL60_RS19665;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;locus_tag=AL60_RS19665;old_locus_tag=AL60_02882 NZ_KK316853.1 Protein Homology CDS 191503 192750 . + 0 ID=cds-WP_003417184.1;Parent=gene-AL60_RS19665;Dbxref=GenBank:WP_003417184.1;Name=WP_003417184.1;gbkey=CDS;gene=hglS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978791.1;locus_tag=AL60_RS19665;product=2-oxoadipate dioxygenase/decarboxylase;protein_id=WP_003417184.1;transl_table=11 NZ_KK316853.1 RefSeq gene 192750 194261 . + . ID=gene-AL60_RS19670;Name=amaB;gbkey=Gene;gene=amaB;gene_biotype=protein_coding;gene_synonym=amaA;locus_tag=AL60_RS19670;old_locus_tag=AL60_02883 NZ_KK316853.1 Protein Homology CDS 192750 194261 . + 0 ID=cds-WP_031647156.1;Parent=gene-AL60_RS19670;Dbxref=GenBank:WP_031647156.1;Name=WP_031647156.1;gbkey=CDS;gene=amaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014383207.1;locus_tag=AL60_RS19670;product=L-piperidine-6-carboxylate dehydrogenase;protein_id=WP_031647156.1;transl_table=11 NZ_KK316853.1 RefSeq gene 194361 195110 . - . ID=gene-AL60_RS19675;Name=AL60_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19675;old_locus_tag=AL60_02884 NZ_KK316853.1 Protein Homology CDS 194361 195110 . - 0 ID=cds-WP_003900005.1;Parent=gene-AL60_RS19675;Dbxref=GenBank:WP_003900005.1;Name=WP_003900005.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF025019.6;locus_tag=AL60_RS19675;product=ATP-binding protein;protein_id=WP_003900005.1;transl_table=11 NZ_KK316853.1 RefSeq gene 195241 195906 . + . ID=gene-AL60_RS19680;Name=AL60_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19680;old_locus_tag=AL60_02885 NZ_KK316853.1 Protein Homology CDS 195241 195906 . + 0 ID=cds-WP_003417200.1;Parent=gene-AL60_RS19680;Dbxref=GenBank:WP_003417200.1;Name=WP_003417200.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217812.1;locus_tag=AL60_RS19680;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003417200.1;transl_table=11 NZ_KK316853.1 RefSeq gene 195950 200491 . + . ID=gene-AL60_RS19685;Name=lhr;gbkey=Gene;gene=lhr;gene_biotype=protein_coding;locus_tag=AL60_RS19685;old_locus_tag=AL60_02886 NZ_KK316853.1 Protein Homology CDS 195950 200491 . + 0 ID=cds-WP_003912132.1;Parent=gene-AL60_RS19685;Dbxref=GenBank:WP_003912132.1;Name=WP_003912132.1;Ontology_term=GO:0003676,GO:0005524,GO:0016818;gbkey=CDS;gene=lhr;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217813.1;locus_tag=AL60_RS19685;product=ATP-dependent helicase;protein_id=WP_003912132.1;transl_table=11 NZ_KK316853.1 RefSeq gene 200495 201262 . + . ID=gene-AL60_RS19690;Name=nei2;gbkey=Gene;gene=nei2;gene_biotype=protein_coding;locus_tag=AL60_RS19690;old_locus_tag=AL60_02887 NZ_KK316853.1 Protein Homology CDS 200495 201262 . + 0 ID=cds-WP_003900006.1;Parent=gene-AL60_RS19690;Dbxref=GenBank:WP_003900006.1;Name=WP_003900006.1;Ontology_term=GO:0006284,GO:0019104,GO:0140078;gbkey=CDS;gene=nei2;go_function=DNA N-glycosylase activity|0019104||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217814.1;locus_tag=AL60_RS19690;product=endonuclease VIII Nei2;protein_id=WP_003900006.1;transl_table=11 NZ_KK316853.1 RefSeq gene 201285 202199 . - . ID=gene-AL60_RS19695;Name=lpqC;gbkey=Gene;gene=lpqC;gene_biotype=protein_coding;locus_tag=AL60_RS19695;old_locus_tag=AL60_02888 NZ_KK316853.1 Protein Homology CDS 201285 202199 . - 0 ID=cds-WP_003417210.1;Parent=gene-AL60_RS19695;Dbxref=GenBank:WP_003417210.1;Name=WP_003417210.1;Ontology_term=GO:0050526;gbkey=CDS;gene=lpqC;go_function=poly(3-hydroxybutyrate) depolymerase activity|0050526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217815.1;locus_tag=AL60_RS19695;product=extracellular catalytic domain type 1 short-chain-length polyhydroxyalkanoate depolymerase;protein_id=WP_003417210.1;transl_table=11 NZ_KK316853.1 RefSeq gene 202226 205138 . - . ID=gene-AL60_RS19700;Name=atsB;gbkey=Gene;gene=atsB;gene_biotype=protein_coding;locus_tag=AL60_RS19700;old_locus_tag=AL60_02889 NZ_KK316853.1 Protein Homology CDS 202226 205138 . - 0 ID=cds-WP_003417213.1;Parent=gene-AL60_RS19700;Dbxref=GenBank:WP_003417213.1;Name=WP_003417213.1;gbkey=CDS;gene=atsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217816.1;locus_tag=AL60_RS19700;product=arylsulfatase AtsB;protein_id=WP_003417213.1;transl_table=11 NZ_KK316853.1 RefSeq gene 205158 206075 . - . ID=gene-AL60_RS19705;Name=AL60_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19705;old_locus_tag=AL60_02890 NZ_KK316853.1 Protein Homology CDS 205158 206075 . - 0 ID=cds-WP_003417215.1;Parent=gene-AL60_RS19705;Dbxref=GenBank:WP_003417215.1;Name=WP_003417215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217817.1;locus_tag=AL60_RS19705;product=RluA family pseudouridine synthase;protein_id=WP_003417215.1;transl_table=11 NZ_KK316853.1 RefSeq gene 206087 206752 . - . ID=gene-AL60_RS19710;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AL60_RS19710;old_locus_tag=AL60_02891 NZ_KK316853.1 Protein Homology CDS 206087 206752 . - 0 ID=cds-WP_003417216.1;Parent=gene-AL60_RS19710;Dbxref=GenBank:WP_003417216.1;Name=WP_003417216.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217818.1;locus_tag=AL60_RS19710;product=phosphate signaling complex protein PhoU;protein_id=WP_003417216.1;transl_table=11 NZ_KK316853.1 RefSeq gene 206860 208617 . - . ID=gene-AL60_RS19715;Name=AL60_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19715;old_locus_tag=AL60_02892 NZ_KK316853.1 Protein Homology CDS 206860 208617 . - 0 ID=cds-WP_012054349.1;Parent=gene-AL60_RS19715;Dbxref=GenBank:WP_012054349.1;Name=WP_012054349.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217819.1;locus_tag=AL60_RS19715;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_012054349.1;transl_table=11 NZ_KK316853.1 RefSeq pseudogene 208632 210113 . - . ID=gene-AL60_RS19720;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=pseudogene;locus_tag=AL60_RS19720;old_locus_tag=AL60_02893;pseudo=true NZ_KK316853.1 Protein Homology CDS 208632 210113 . - 0 ID=cds-AL60_RS19720;Parent=gene-AL60_RS19720;Note=internal stop;Ontology_term=GO:0045454,GO:0016491,GO:0050660;gbkey=CDS;gene=lpdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217820.1;locus_tag=AL60_RS19720;product=NAD(P)H-quinone dehydrogenase;pseudo=true;transl_table=11 NZ_KK316853.1 RefSeq gene 210258 210737 . + . ID=gene-AL60_RS19725;Name=AL60_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19725;old_locus_tag=AL60_02894 NZ_KK316853.1 Protein Homology CDS 210258 210737 . + 0 ID=cds-WP_003417219.1;Parent=gene-AL60_RS19725;Dbxref=GenBank:WP_003417219.1;Name=WP_003417219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217821.1;locus_tag=AL60_RS19725;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_003417219.1;transl_table=11 NZ_KK316853.1 RefSeq gene 210756 211925 . - . ID=gene-AL60_RS19730;Name=AL60_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19730;old_locus_tag=AL60_02895 NZ_KK316853.1 Protein Homology CDS 210756 211925 . - 0 ID=cds-WP_003417220.1;Parent=gene-AL60_RS19730;Dbxref=GenBank:WP_003417220.1;Name=WP_003417220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177955.1;locus_tag=AL60_RS19730;product=M20 family metallopeptidase;protein_id=WP_003417220.1;transl_table=11 NZ_KK316853.1 RefSeq gene 211922 213106 . - . ID=gene-AL60_RS19735;Name=AL60_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19735;old_locus_tag=AL60_02896 NZ_KK316853.1 Protein Homology CDS 211922 213106 . - 0 ID=cds-WP_003900009.1;Parent=gene-AL60_RS19735;Dbxref=GenBank:WP_003900009.1;Name=WP_003900009.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177956.1;locus_tag=AL60_RS19735;product=M20 family metallopeptidase;protein_id=WP_003900009.1;transl_table=11 NZ_KK316853.1 RefSeq gene 213171 213977 . + . ID=gene-AL60_RS19740;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AL60_RS19740;old_locus_tag=AL60_02897 NZ_KK316853.1 Protein Homology CDS 213171 213977 . + 0 ID=cds-WP_003417233.1;Parent=gene-AL60_RS19740;Dbxref=GenBank:WP_003417233.1;Name=WP_003417233.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217824.1;locus_tag=AL60_RS19740;product=purine-nucleoside phosphorylase;protein_id=WP_003417233.1;transl_table=11 NZ_KK316853.1 RefSeq gene 213981 215585 . + . ID=gene-AL60_RS19745;Name=pmmB;gbkey=Gene;gene=pmmB;gene_biotype=protein_coding;locus_tag=AL60_RS19745;old_locus_tag=AL60_02898 NZ_KK316853.1 Protein Homology CDS 213981 215585 . + 0 ID=cds-WP_003900011.1;Parent=gene-AL60_RS19745;Dbxref=GenBank:WP_003900011.1;Name=WP_003900011.1;Ontology_term=GO:0016868;gbkey=CDS;gene=pmmB;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217825.1;locus_tag=AL60_RS19745;product=phospho-sugar mutase;protein_id=WP_003900011.1;transl_table=11 NZ_KK316853.1 RefSeq gene 215587 216210 . - . ID=gene-AL60_RS19750;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AL60_RS19750;old_locus_tag=AL60_02899 NZ_KK316853.1 Protein Homology CDS 215587 216210 . - 0 ID=cds-WP_003417245.1;Parent=gene-AL60_RS19750;Dbxref=GenBank:WP_003417245.1;Name=WP_003417245.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217826.1;locus_tag=AL60_RS19750;product=uracil phosphoribosyltransferase;protein_id=WP_003417245.1;transl_table=11 NZ_KK316853.1 RefSeq gene 216315 217214 . + . ID=gene-AL60_RS19755;Name=sapM;gbkey=Gene;gene=sapM;gene_biotype=protein_coding;locus_tag=AL60_RS19755;old_locus_tag=AL60_02900 NZ_KK316853.1 Protein Homology CDS 216315 217214 . + 0 ID=cds-WP_003900013.1;Parent=gene-AL60_RS19755;Dbxref=GenBank:WP_003900013.1;Name=WP_003900013.1;gbkey=CDS;gene=sapM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217827.1;locus_tag=AL60_RS19755;product=phosphatidylinositol-3-phosphatase SapM;protein_id=WP_003900013.1;transl_table=11 NZ_KK316853.1 RefSeq gene 217238 218500 . + . ID=gene-AL60_RS19760;Name=satS;gbkey=Gene;gene=satS;gene_biotype=protein_coding;locus_tag=AL60_RS19760;old_locus_tag=AL60_02901 NZ_KK316853.1 Protein Homology CDS 217238 218500 . + 0 ID=cds-WP_003417251.1;Parent=gene-AL60_RS19760;Dbxref=GenBank:WP_003417251.1;Name=WP_003417251.1;gbkey=CDS;gene=satS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217828.1;locus_tag=AL60_RS19760;product=protein export chaperone SatS;protein_id=WP_003417251.1;transl_table=11 NZ_KK316853.1 RefSeq gene 218521 219447 . - . ID=gene-AL60_RS19765;Name=AL60_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19765;old_locus_tag=AL60_02902 NZ_KK316853.1 Protein Homology CDS 218521 219447 . - 0 ID=cds-WP_003417254.1;Parent=gene-AL60_RS19765;Dbxref=GenBank:WP_003417254.1;Name=WP_003417254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217829.1;locus_tag=AL60_RS19765;product=alpha/beta fold hydrolase;protein_id=WP_003417254.1;transl_table=11 NZ_KK316853.1 RefSeq gene 219473 219643 . - . ID=gene-AL60_RS26250;Name=AL60_RS26250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26250 NZ_KK316853.1 Protein Homology CDS 219473 219643 . - 0 ID=cds-WP_003900015.1;Parent=gene-AL60_RS26250;Dbxref=GenBank:WP_003900015.1;Name=WP_003900015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030045.1;locus_tag=AL60_RS26250;product=hypothetical protein;protein_id=WP_003900015.1;transl_table=11 NZ_KK316853.1 RefSeq gene 219822 220133 . - . ID=gene-AL60_RS19770;Name=mtp;gbkey=Gene;gene=mtp;gene_biotype=protein_coding;locus_tag=AL60_RS19770;old_locus_tag=AL60_02903 NZ_KK316853.1 Protein Homology CDS 219822 220133 . - 0 ID=cds-WP_003417257.1;Parent=gene-AL60_RS19770;Dbxref=GenBank:WP_003417257.1;Name=WP_003417257.1;gbkey=CDS;gene=mtp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177957.1;locus_tag=AL60_RS19770;product=pilin structural subunit Mtp;protein_id=WP_003417257.1;transl_table=11 NZ_KK316853.1 RefSeq gene 220204 221301 . - . ID=gene-AL60_RS19775;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=AL60_RS19775;old_locus_tag=AL60_02904 NZ_KK316853.1 Protein Homology CDS 220204 221301 . - 0 ID=cds-WP_003417259.1;Parent=gene-AL60_RS19775;Dbxref=GenBank:WP_003417259.1;Name=WP_003417259.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217830.1;locus_tag=AL60_RS19775;product=adenosine deaminase;protein_id=WP_003417259.1;transl_table=11 NZ_KK316853.1 RefSeq gene 221301 222584 . - . ID=gene-AL60_RS19780;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=AL60_RS19780;old_locus_tag=AL60_02905 NZ_KK316853.1 Protein Homology CDS 221301 222584 . - 0 ID=cds-WP_003900016.1;Parent=gene-AL60_RS19780;Dbxref=GenBank:WP_003900016.1;Name=WP_003900016.1;Ontology_term=GO:0006206;gbkey=CDS;gene=deoA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217831.1;locus_tag=AL60_RS19780;product=thymidine phosphorylase;protein_id=WP_003900016.1;transl_table=11 NZ_KK316853.1 RefSeq gene 222581 222982 . - . ID=gene-AL60_RS19785;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=AL60_RS19785;old_locus_tag=AL60_02906 NZ_KK316853.1 Protein Homology CDS 222581 222982 . - 0 ID=cds-WP_003417264.1;Parent=gene-AL60_RS19785;Dbxref=GenBank:WP_003417264.1;Name=WP_003417264.1;Ontology_term=GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217832.1;locus_tag=AL60_RS19785;product=cytidine deaminase;protein_id=WP_003417264.1;transl_table=11 NZ_KK316853.1 RefSeq gene 223219 223557 . + . ID=gene-AL60_RS19790;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=AL60_RS19790;old_locus_tag=AL60_02907 NZ_KK316853.1 Protein Homology CDS 223219 223557 . + 0 ID=cds-WP_003417267.1;Parent=gene-AL60_RS19790;Dbxref=GenBank:WP_003417267.1;Name=WP_003417267.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0045273;gbkey=CDS;gene=sdhC;go_component=respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217833.1;locus_tag=AL60_RS19790;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_003417267.1;transl_table=11 NZ_KK316853.1 RefSeq gene 223554 223988 . + . ID=gene-AL60_RS19795;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=AL60_RS19795;old_locus_tag=AL60_02908 NZ_KK316853.1 Protein Homology CDS 223554 223988 . + 0 ID=cds-WP_003417269.1;Parent=gene-AL60_RS19795;Dbxref=GenBank:WP_003417269.1;Name=WP_003417269.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217834.1;locus_tag=AL60_RS19795;product=succinate dehydrogenase hydrophobic membrane anchor subunit;protein_id=WP_003417269.1;transl_table=11 NZ_KK316853.1 RefSeq gene 224117 225889 . + . ID=gene-AL60_RS19800;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AL60_RS19800;old_locus_tag=AL60_02909 NZ_KK316853.1 Protein Homology CDS 224117 225889 . + 0 ID=cds-WP_003417273.1;Parent=gene-AL60_RS19800;Dbxref=GenBank:WP_003417273.1;Name=WP_003417273.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217835.1;locus_tag=AL60_RS19800;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_003417273.1;transl_table=11 NZ_KK316853.1 RefSeq gene 225889 226680 . + . ID=gene-AL60_RS19805;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=AL60_RS19805;old_locus_tag=AL60_02910 NZ_KK316853.1 Protein Homology CDS 225889 226680 . + 0 ID=cds-WP_003417279.1;Parent=gene-AL60_RS19805;Dbxref=GenBank:WP_003417279.1;Name=WP_003417279.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;gene=sdhB;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217836.1;locus_tag=AL60_RS19805;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_003417279.1;transl_table=11 NZ_KK316853.1 RefSeq gene 226759 227187 . - . ID=gene-AL60_RS19810;Name=AL60_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19810;old_locus_tag=AL60_02911 NZ_KK316853.1 Protein Homology CDS 226759 227187 . - 0 ID=cds-WP_003417282.1;Parent=gene-AL60_RS19810;Dbxref=GenBank:WP_003417282.1;Name=WP_003417282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217837.1;locus_tag=AL60_RS19810;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003417282.1;transl_table=11 NZ_KK316853.1 RefSeq gene 227191 227433 . - . ID=gene-AL60_RS19815;Name=AL60_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19815;old_locus_tag=AL60_02912 NZ_KK316853.1 Protein Homology CDS 227191 227433 . - 0 ID=cds-WP_003417286.1;Parent=gene-AL60_RS19815;Dbxref=GenBank:WP_003417286.1;Name=WP_003417286.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217838.1;locus_tag=AL60_RS19815;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003417286.1;transl_table=11 NZ_KK316853.1 RefSeq gene 227555 228169 . - . ID=gene-AL60_RS19820;Name=AL60_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19820;old_locus_tag=AL60_02913 NZ_KK316853.1 Protein Homology CDS 227555 228169 . - 0 ID=cds-WP_003417288.1;Parent=gene-AL60_RS19820;Dbxref=GenBank:WP_003417288.1;Name=WP_003417288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177958.1;locus_tag=AL60_RS19820;product=methyltransferase domain-containing protein;protein_id=WP_003417288.1;transl_table=11 NZ_KK316853.1 RefSeq gene 228166 228831 . - . ID=gene-AL60_RS19825;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AL60_RS19825;old_locus_tag=AL60_02914 NZ_KK316853.1 Protein Homology CDS 228166 228831 . - 0 ID=cds-WP_003417290.1;Parent=gene-AL60_RS19825;Dbxref=GenBank:WP_003417290.1;Name=WP_003417290.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177959.1;locus_tag=AL60_RS19825;product=molybdopterin converting factor subunit 1;protein_id=WP_003417290.1;transl_table=11 NZ_KK316853.1 RefSeq gene 228832 229365 . - . ID=gene-AL60_RS19830;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AL60_RS19830;old_locus_tag=AL60_02915 NZ_KK316853.1 Protein Homology CDS 228832 229365 . - 0 ID=cds-WP_003417293.1;Parent=gene-AL60_RS19830;Dbxref=GenBank:WP_003417293.1;Name=WP_003417293.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217841.3;locus_tag=AL60_RS19830;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_003417293.1;transl_table=11 NZ_KK316853.1 RefSeq gene 229362 229736 . - . ID=gene-AL60_RS19835;Name=AL60_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19835;old_locus_tag=AL60_02916 NZ_KK316853.1 Protein Homology CDS 229362 229736 . - 0 ID=cds-WP_003417295.1;Parent=gene-AL60_RS19835;Dbxref=GenBank:WP_003417295.1;Name=WP_003417295.1;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003417295.1;locus_tag=AL60_RS19835;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_003417295.1;transl_table=11 ##sequence-region NZ_KK316854.1 1 190845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316854.1 RefSeq region 1 190845 . + . ID=NZ_KK316854.1:1..190845;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316854.1 RefSeq gene 755 2602 . - . ID=gene-AL60_RS19840;Name=AL60_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19840;old_locus_tag=AL60_02917 NZ_KK316854.1 Protein Homology CDS 755 2602 . - 0 ID=cds-WP_003904827.1;Parent=gene-AL60_RS19840;Dbxref=GenBank:WP_003904827.1;Name=WP_003904827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939045.1;locus_tag=AL60_RS19840;product=PPE family protein;protein_id=WP_003904827.1;transl_table=11 NZ_KK316854.1 RefSeq gene 2740 4131 . - . ID=gene-AL60_RS19845;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AL60_RS19845;old_locus_tag=AL60_02918 NZ_KK316854.1 Protein Homology CDS 2740 4131 . - 0 ID=cds-WP_003412200.1;Parent=gene-AL60_RS19845;Dbxref=GenBank:WP_003412200.1;Name=WP_003412200.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;gene=glyS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216873.1;locus_tag=AL60_RS19845;product=glycine--tRNA ligase;protein_id=WP_003412200.1;transl_table=11 NZ_KK316854.1 RefSeq gene 4313 4720 . + . ID=gene-AL60_RS19850;Name=smtB;gbkey=Gene;gene=smtB;gene_biotype=protein_coding;locus_tag=AL60_RS19850;old_locus_tag=AL60_02919 NZ_KK316854.1 Protein Homology CDS 4313 4720 . + 0 ID=cds-WP_003412205.1;Parent=gene-AL60_RS19850;Dbxref=GenBank:WP_003412205.1;Name=WP_003412205.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=smtB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216874.1;locus_tag=AL60_RS19850;product=ArsR/SmtB family transcription factor;protein_id=WP_003412205.1;transl_table=11 NZ_KK316854.1 RefSeq gene 4717 5109 . + . ID=gene-AL60_RS19855;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=AL60_RS19855;old_locus_tag=AL60_02920 NZ_KK316854.1 Protein Homology CDS 4717 5109 . + 0 ID=cds-WP_003899290.1;Parent=gene-AL60_RS19855;Dbxref=GenBank:WP_003899290.1;Name=WP_003899290.1;gbkey=CDS;gene=zur;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216875.1;locus_tag=AL60_RS19855;product=Fur family transcriptional regulator;protein_id=WP_003899290.1;transl_table=11 NZ_KK316854.1 RefSeq gene 5217 5645 . - . ID=gene-AL60_RS19860;Name=AL60_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19860;old_locus_tag=AL60_02921 NZ_KK316854.1 Protein Homology CDS 5217 5645 . - 0 ID=cds-WP_003906807.1;Parent=gene-AL60_RS19860;Dbxref=GenBank:WP_003906807.1;Name=WP_003906807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216876.1;locus_tag=AL60_RS19860;product=hypothetical protein;protein_id=WP_003906807.1;transl_table=11 NZ_KK316854.1 RefSeq gene 5645 6535 . - . ID=gene-AL60_RS19865;Name=AL60_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19865;old_locus_tag=AL60_02922 NZ_KK316854.1 Protein Homology CDS 5645 6535 . - 0 ID=cds-WP_003412212.1;Parent=gene-AL60_RS19865;Dbxref=GenBank:WP_003412212.1;Name=WP_003412212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216877.1;locus_tag=AL60_RS19865;product=decaprenyl diphosphate synthase;protein_id=WP_003412212.1;transl_table=11 NZ_KK316854.1 RefSeq gene 6528 7325 . - . ID=gene-AL60_RS19870;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AL60_RS19870;old_locus_tag=AL60_02923 NZ_KK316854.1 Protein Homology CDS 6528 7325 . - 0 ID=cds-WP_003412222.1;Parent=gene-AL60_RS19870;Dbxref=GenBank:WP_003412222.1;Name=WP_003412222.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216878.1;locus_tag=AL60_RS19870;product=DNA repair protein RecO;protein_id=WP_003412222.1;transl_table=11 NZ_KK316854.1 RefSeq gene 7387 8841 . + . ID=gene-AL60_RS19875;Name=AL60_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19875;old_locus_tag=AL60_02924 NZ_KK316854.1 Protein Homology CDS 7387 8841 . + 0 ID=cds-WP_003412223.1;Parent=gene-AL60_RS19875;Dbxref=GenBank:WP_003412223.1;Name=WP_003412223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216879.1;locus_tag=AL60_RS19875;product=amidase;protein_id=WP_003412223.1;transl_table=11 NZ_KK316854.1 RefSeq gene 8838 9740 . - . ID=gene-AL60_RS19880;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AL60_RS19880;old_locus_tag=AL60_02925 NZ_KK316854.1 Protein Homology CDS 8838 9740 . - 0 ID=cds-WP_003412224.1;Parent=gene-AL60_RS19880;Dbxref=GenBank:WP_003412224.1;Name=WP_003412224.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177873.1;locus_tag=AL60_RS19880;product=GTPase Era;protein_id=WP_003412224.1;transl_table=11 NZ_KK316854.1 RefSeq gene 9814 10155 . - . ID=gene-AL60_RS19885;Name=AL60_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19885;old_locus_tag=AL60_02926 NZ_KK316854.1 Protein Homology CDS 9814 10155 . - 0 ID=cds-WP_003412226.1;Parent=gene-AL60_RS19885;Dbxref=GenBank:WP_003412226.1;Name=WP_003412226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216881.1;locus_tag=AL60_RS19885;product=hypothetical protein;protein_id=WP_003412226.1;transl_table=11 NZ_KK316854.1 RefSeq gene 10127 11434 . - . ID=gene-AL60_RS19890;Name=AL60_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19890;old_locus_tag=AL60_02927 NZ_KK316854.1 Protein Homology CDS 10127 11434 . - 0 ID=cds-WP_003412229.1;Parent=gene-AL60_RS19890;Dbxref=GenBank:WP_003412229.1;Name=WP_003412229.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216882.1;locus_tag=AL60_RS19890;product=hemolysin family protein;protein_id=WP_003412229.1;transl_table=11 NZ_KK316854.1 RefSeq gene 11431 11964 . - . ID=gene-AL60_RS19895;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=AL60_RS19895;old_locus_tag=AL60_02928 NZ_KK316854.1 Protein Homology CDS 11431 11964 . - 0 ID=cds-WP_003899292.1;Parent=gene-AL60_RS19895;Dbxref=GenBank:WP_003899292.1;Name=WP_003899292.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003412232.1;locus_tag=AL60_RS19895;product=rRNA maturation RNase YbeY;protein_id=WP_003899292.1;transl_table=11 NZ_KK316854.1 RefSeq gene 11983 13041 . - . ID=gene-AL60_RS19900;Name=AL60_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19900;old_locus_tag=AL60_02929 NZ_KK316854.1 Protein Homology CDS 11983 13041 . - 0 ID=cds-WP_003412235.1;Parent=gene-AL60_RS19900;Dbxref=GenBank:WP_003412235.1;Name=WP_003412235.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177874.1;locus_tag=AL60_RS19900;product=PhoH family protein;protein_id=WP_003412235.1;transl_table=11 NZ_KK316854.1 RefSeq gene 13013 13315 . - . ID=gene-AL60_RS26270;Name=AL60_RS26270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26270;old_locus_tag=AL60_02930 NZ_KK316854.1 Protein Homology CDS 13013 13315 . - 0 ID=cds-WP_003902257.1;Parent=gene-AL60_RS26270;Dbxref=GenBank:WP_003902257.1;Name=WP_003902257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216885.1;locus_tag=AL60_RS26270;product=hypothetical protein;protein_id=WP_003902257.1;transl_table=11 NZ_KK316854.1 RefSeq gene 13312 14625 . - . ID=gene-AL60_RS19905;Name=AL60_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19905;old_locus_tag=AL60_02931 NZ_KK316854.1 Protein Homology CDS 13312 14625 . - 0 ID=cds-WP_003899293.1;Parent=gene-AL60_RS19905;Dbxref=GenBank:WP_003899293.1;Name=WP_003899293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216886.1;locus_tag=AL60_RS19905;product=Rv1453 family transcriptional regulator;protein_id=WP_003899293.1;transl_table=11 NZ_KK316854.1 RefSeq pseudogene 14820 15002 . + . ID=gene-AL60_RS27635;Name=AL60_RS27635;end_range=15002,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27635;old_locus_tag=AL60_02932;partial=true;pseudo=true NZ_KK316854.1 Protein Homology CDS 14820 15002 . + 0 ID=cds-AL60_RS27635;Parent=gene-AL60_RS27635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;end_range=15002,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177812.1;locus_tag=AL60_RS27635;partial=true;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316854.1 RefSeq gene 15104 15892 . - . ID=gene-AL60_RS19915;Name=AL60_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19915;old_locus_tag=AL60_02933 NZ_KK316854.1 Protein Homology CDS 15104 15892 . - 0 ID=cds-WP_003900509.1;Parent=gene-AL60_RS19915;Dbxref=GenBank:WP_003900509.1;Name=WP_003900509.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216888.1;locus_tag=AL60_RS19915;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_003900509.1;transl_table=11 NZ_KK316854.1 RefSeq gene 15906 17054 . - . ID=gene-AL60_RS19920;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AL60_RS19920;old_locus_tag=AL60_02934 NZ_KK316854.1 Protein Homology CDS 15906 17054 . - 0 ID=cds-WP_003899294.1;Parent=gene-AL60_RS19920;Dbxref=GenBank:WP_003899294.1;Name=WP_003899294.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216889.1;locus_tag=AL60_RS19920;product=molecular chaperone DnaJ;protein_id=WP_003899294.1;transl_table=11 NZ_KK316854.1 RefSeq gene 17129 18160 . - . ID=gene-AL60_RS19925;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=AL60_RS19925;old_locus_tag=AL60_02935 NZ_KK316854.1 Protein Homology CDS 17129 18160 . - 0 ID=cds-WP_012054317.1;Parent=gene-AL60_RS19925;Dbxref=GenBank:WP_012054317.1;Name=WP_012054317.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216890.1;locus_tag=AL60_RS19925;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_012054317.1;transl_table=11 NZ_KK316854.1 RefSeq gene 18332 18649 . + . ID=gene-AL60_RS19930;Name=AL60_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19930;old_locus_tag=AL60_02936 NZ_KK316854.1 Protein Homology CDS 18332 18649 . + 0 ID=cds-WP_003412258.1;Parent=gene-AL60_RS19930;Dbxref=GenBank:WP_003412258.1;Name=WP_003412258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216891.1;locus_tag=AL60_RS19930;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003412258.1;transl_table=11 NZ_KK316854.1 RefSeq gene 18676 19182 . - . ID=gene-AL60_RS19935;Name=AL60_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19935;old_locus_tag=AL60_02937 NZ_KK316854.1 Protein Homology CDS 18676 19182 . - 0 ID=cds-WP_003412264.1;Parent=gene-AL60_RS19935;Dbxref=GenBank:WP_003412264.1;Name=WP_003412264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216892.1;locus_tag=AL60_RS19935;product=MTB12 family secreted protein;protein_id=WP_003412264.1;transl_table=11 NZ_KK316854.1 RefSeq gene 19282 19497 . - . ID=gene-AL60_RS19940;Name=mbtH;gbkey=Gene;gene=mbtH;gene_biotype=protein_coding;locus_tag=AL60_RS19940;old_locus_tag=AL60_02938 NZ_KK316854.1 Protein Homology CDS 19282 19497 . - 0 ID=cds-WP_003412265.1;Parent=gene-AL60_RS19940;Dbxref=GenBank:WP_003412265.1;Name=WP_003412265.1;gbkey=CDS;gene=mbtH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216893.1;locus_tag=AL60_RS19940;product=mycobactin NRPS accessory protein MbtH;protein_id=WP_003412265.1;transl_table=11 NZ_KK316854.1 RefSeq gene 19475 20770 . - . ID=gene-AL60_RS19945;Name=mbtG;gbkey=Gene;gene=mbtG;gene_biotype=protein_coding;locus_tag=AL60_RS19945;old_locus_tag=AL60_02939 NZ_KK316854.1 Protein Homology CDS 19475 20770 . - 0 ID=cds-WP_003899296.1;Parent=gene-AL60_RS19945;Dbxref=GenBank:WP_003899296.1;Name=WP_003899296.1;gbkey=CDS;gene=mbtG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216894.1;locus_tag=AL60_RS19945;product=NADPH-dependent L-lysine N(6)-monooxygenase MbtG;protein_id=WP_003899296.1;transl_table=11 NZ_KK316854.1 RefSeq gene 20767 25137 . - . ID=gene-AL60_RS19950;Name=mbtF;gbkey=Gene;gene=mbtF;gene_biotype=protein_coding;locus_tag=AL60_RS19950;old_locus_tag=AL60_02940 NZ_KK316854.1 Protein Homology CDS 20767 25137 . - 0 ID=cds-WP_023641714.1;Parent=gene-AL60_RS19950;Dbxref=GenBank:WP_023641714.1;Name=WP_023641714.1;Ontology_term=GO:1904091;gbkey=CDS;gene=mbtF;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917623.1;locus_tag=AL60_RS19950;product=mycobactin non-ribosomal peptide synthetase MbtF;protein_id=WP_023641714.1;transl_table=11 NZ_KK316854.1 RefSeq gene 25134 30329 . - . ID=gene-AL60_RS19955;Name=mbtE;gbkey=Gene;gene=mbtE;gene_biotype=protein_coding;locus_tag=AL60_RS19955;old_locus_tag=AL60_02941 NZ_KK316854.1 Protein Homology CDS 25134 30329 . - 0 ID=cds-WP_003899297.1;Parent=gene-AL60_RS19955;Dbxref=GenBank:WP_003899297.1;Name=WP_003899297.1;Ontology_term=GO:1904091;gbkey=CDS;gene=mbtE;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899297.1;locus_tag=AL60_RS19955;product=mycobactin non-ribosomal peptide synthetase MbtE;protein_id=WP_003899297.1;transl_table=11 NZ_KK316854.1 RefSeq gene 30322 33336 . - . ID=gene-AL60_RS19960;Name=mbtD;gbkey=Gene;gene=mbtD;gene_biotype=protein_coding;locus_tag=AL60_RS19960;old_locus_tag=AL60_02942 NZ_KK316854.1 Protein Homology CDS 30322 33336 . - 0 ID=cds-WP_003412277.1;Parent=gene-AL60_RS19960;Dbxref=GenBank:WP_003412277.1;Name=WP_003412277.1;gbkey=CDS;gene=mbtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216897.1;locus_tag=AL60_RS19960;product=mycobactin polyketide synthase MbtD;protein_id=WP_003412277.1;transl_table=11 NZ_KK316854.1 RefSeq gene 33336 34670 . - . ID=gene-AL60_RS19965;Name=mbtC;gbkey=Gene;gene=mbtC;gene_biotype=protein_coding;locus_tag=AL60_RS19965;old_locus_tag=AL60_02943 NZ_KK316854.1 Protein Homology CDS 33336 34670 . - 0 ID=cds-WP_003412278.1;Parent=gene-AL60_RS19965;Dbxref=GenBank:WP_003412278.1;Name=WP_003412278.1;gbkey=CDS;gene=mbtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216898.1;locus_tag=AL60_RS19965;product=polyketide synthetase MbtC;protein_id=WP_003412278.1;transl_table=11 NZ_KK316854.1 RefSeq gene 34660 38904 . - . ID=gene-AL60_RS19970;Name=mbtB;gbkey=Gene;gene=mbtB;gene_biotype=protein_coding;locus_tag=AL60_RS19970;old_locus_tag=AL60_02944 NZ_KK316854.1 Protein Homology CDS 34660 38904 . - 0 ID=cds-WP_003899299.1;Parent=gene-AL60_RS19970;Dbxref=GenBank:WP_003899299.1;Name=WP_003899299.1;gbkey=CDS;gene=mbtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216899.1;locus_tag=AL60_RS19970;product=phenyloxazoline synthase MbtB;protein_id=WP_003899299.1;transl_table=11 NZ_KK316854.1 RefSeq gene 39003 40700 . + . ID=gene-AL60_RS19975;Name=mbtA;gbkey=Gene;gene=mbtA;gene_biotype=protein_coding;locus_tag=AL60_RS19975;old_locus_tag=AL60_02945 NZ_KK316854.1 Protein Homology CDS 39003 40700 . + 0 ID=cds-WP_003412282.1;Parent=gene-AL60_RS19975;Dbxref=GenBank:WP_003412282.1;Name=WP_003412282.1;gbkey=CDS;gene=mbtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216900.1;locus_tag=AL60_RS19975;product=bifunctional salicyl-AMP ligase/salicyl-S-ArCP synthetase MbtA;protein_id=WP_003412282.1;transl_table=11 NZ_KK316854.1 RefSeq gene 40733 41716 . + . ID=gene-AL60_RS19980;Name=mbtJ;gbkey=Gene;gene=mbtJ;gene_biotype=protein_coding;gene_synonym=lipK;locus_tag=AL60_RS19980;old_locus_tag=AL60_02946 NZ_KK316854.1 Protein Homology CDS 40733 41716 . + 0 ID=cds-WP_003899300.1;Parent=gene-AL60_RS19980;Dbxref=GenBank:WP_003899300.1;Name=WP_003899300.1;gbkey=CDS;gene=mbtJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899300.1;locus_tag=AL60_RS19980;product=acetyl hydrolase/esterase MbtJ;protein_id=WP_003899300.1;transl_table=11 NZ_KK316854.1 RefSeq gene 41720 43072 . - . ID=gene-AL60_RS19985;Name=mbtI;gbkey=Gene;gene=mbtI;gene_biotype=protein_coding;locus_tag=AL60_RS19985;old_locus_tag=AL60_02947 NZ_KK316854.1 Protein Homology CDS 41720 43072 . - 0 ID=cds-WP_003412287.1;Parent=gene-AL60_RS19985;Dbxref=GenBank:WP_003412287.1;Name=WP_003412287.1;gbkey=CDS;gene=mbtI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177877.1;locus_tag=AL60_RS19985;product=mycobactin biosynthesis salicylate synthase MbtI;protein_id=WP_003412287.1;transl_table=11 NZ_KK316854.1 RefSeq gene 43525 43734 . + . ID=gene-AL60_RS19990;Name=AL60_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19990;old_locus_tag=AL60_02948 NZ_KK316854.1 Protein Homology CDS 43525 43734 . + 0 ID=cds-WP_003899302.1;Parent=gene-AL60_RS19990;Dbxref=GenBank:WP_003899302.1;Name=WP_003899302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030039.1;locus_tag=AL60_RS19990;product=hypothetical protein;protein_id=WP_003899302.1;transl_table=11 NZ_KK316854.1 RefSeq gene 43832 45085 . + . ID=gene-AL60_RS19995;Name=AL60_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS19995;old_locus_tag=AL60_02949 NZ_KK316854.1 Protein Homology CDS 43832 45085 . + 0 ID=cds-WP_003412289.1;Parent=gene-AL60_RS19995;Dbxref=GenBank:WP_003412289.1;Name=WP_003412289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216903.1;locus_tag=AL60_RS19995;product=sodium-dependent bicarbonate transport family permease;protein_id=WP_003412289.1;transl_table=11 NZ_KK316854.1 RefSeq gene 45082 46254 . - . ID=gene-AL60_RS20000;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=AL60_RS20000;old_locus_tag=AL60_02950 NZ_KK316854.1 Protein Homology CDS 45082 46254 . - 0 ID=cds-WP_003412290.1;Parent=gene-AL60_RS20000;Dbxref=GenBank:WP_003412290.1;Name=WP_003412290.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631433.1;locus_tag=AL60_RS20000;product=radical SAM family heme chaperone HemW;protein_id=WP_003412290.1;transl_table=11 NZ_KK316854.1 RefSeq gene 46315 46779 . - . ID=gene-AL60_RS20005;Name=rpfD;gbkey=Gene;gene=rpfD;gene_biotype=protein_coding;locus_tag=AL60_RS20005;old_locus_tag=AL60_02951 NZ_KK316854.1 Protein Homology CDS 46315 46779 . - 0 ID=cds-WP_003412293.1;Parent=gene-AL60_RS20005;Dbxref=GenBank:WP_003412293.1;Name=WP_003412293.1;gbkey=CDS;gene=rpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216905.1;locus_tag=AL60_RS20005;product=resuscitation-promoting factor protein RpfD;protein_id=WP_003412293.1;transl_table=11 NZ_KK316854.1 RefSeq gene 46776 47333 . - . ID=gene-AL60_RS20010;Name=AL60_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20010;old_locus_tag=AL60_02952 NZ_KK316854.1 Protein Homology CDS 46776 47333 . - 0 ID=cds-WP_003412295.1;Parent=gene-AL60_RS20010;Dbxref=GenBank:WP_003412295.1;Name=WP_003412295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216906.1;locus_tag=AL60_RS20010;product=hypothetical protein;protein_id=WP_003412295.1;transl_table=11 NZ_KK316854.1 RefSeq gene 47599 47655 . + . ID=gene-AL60_RS27985;Name=AL60_RS27985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27985 NZ_KK316854.1 Protein Homology CDS 47599 47655 . + 0 ID=cds-WP_349814673.1;Parent=gene-AL60_RS27985;Dbxref=GenBank:WP_349814673.1;Name=WP_349814673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042936.1;locus_tag=AL60_RS27985;product=Ms4527A family Cys-rich leader peptide;protein_id=WP_349814673.1;transl_table=11 NZ_KK316854.1 RefSeq gene 47770 49437 . + . ID=gene-AL60_RS20015;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=protein_coding;locus_tag=AL60_RS20015;old_locus_tag=AL60_02953 NZ_KK316854.1 Protein Homology CDS 47770 49437 . + 0 ID=cds-WP_003899303.1;Parent=gene-AL60_RS20015;Dbxref=GenBank:WP_003899303.1;Name=WP_003899303.1;gbkey=CDS;gene=sirA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899303.1;locus_tag=AL60_RS20015;product=sulfite reductase SirA;protein_id=WP_003899303.1;transl_table=11 NZ_KK316854.1 RefSeq gene 49434 50198 . + . ID=gene-AL60_RS20020;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=AL60_RS20020;old_locus_tag=AL60_02954 NZ_KK316854.1 Protein Homology CDS 49434 50198 . + 0 ID=cds-WP_003412303.1;Parent=gene-AL60_RS20020;Dbxref=GenBank:WP_003412303.1;Name=WP_003412303.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;gene=cysH;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216908.1;locus_tag=AL60_RS20020;product=phosphoadenylyl-sulfate reductase;protein_id=WP_003412303.1;transl_table=11 NZ_KK316854.1 RefSeq gene 50195 51040 . + . ID=gene-AL60_RS20025;Name=AL60_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20025;old_locus_tag=AL60_02955 NZ_KK316854.1 Protein Homology CDS 50195 51040 . + 0 ID=cds-WP_003412306.1;Parent=gene-AL60_RS20025;Dbxref=GenBank:WP_003412306.1;Name=WP_003412306.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=AL60_RS20025;product=sirohydrochlorin chelatase;protein_id=WP_003412306.1;transl_table=11 NZ_KK316854.1 RefSeq gene 51077 53008 . + . ID=gene-AL60_RS20030;Name=ggtB;gbkey=Gene;gene=ggtB;gene_biotype=protein_coding;locus_tag=AL60_RS20030;old_locus_tag=AL60_02956 NZ_KK316854.1 Protein Homology CDS 51077 53008 . + 0 ID=cds-WP_003899304.1;Parent=gene-AL60_RS20030;Dbxref=GenBank:WP_003899304.1;Name=WP_003899304.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ggtB;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216910.1;locus_tag=AL60_RS20030;product=gamma-glutamyltransferase family protein;protein_id=WP_003899304.1;transl_table=11 NZ_KK316854.1 RefSeq gene 53139 55142 . + . ID=gene-AL60_RS20035;Name=AL60_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20035;old_locus_tag=AL60_02957 NZ_KK316854.1 Protein Homology CDS 53139 55142 . + 0 ID=cds-WP_003899305.1;Parent=gene-AL60_RS20035;Dbxref=GenBank:WP_003899305.1;Name=WP_003899305.1;Ontology_term=GO:0006857,GO:0035673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=oligopeptide transport|0006857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216911.1;locus_tag=AL60_RS20035;product=OPT family oligopeptide transporter;protein_id=WP_003899305.1;transl_table=11 NZ_KK316854.1 RefSeq gene 55291 55506 . + . ID=gene-AL60_RS20040;Name=aprA;gbkey=Gene;gene=aprA;gene_biotype=protein_coding;locus_tag=AL60_RS20040;old_locus_tag=AL60_02958 NZ_KK316854.1 Protein Homology CDS 55291 55506 . + 0 ID=cds-WP_003899306.1;Parent=gene-AL60_RS20040;Dbxref=GenBank:WP_003899306.1;Name=WP_003899306.1;gbkey=CDS;gene=aprA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411091.1;locus_tag=AL60_RS20040;product=acid and phagosome regulated protein AprA;protein_id=WP_003899306.1;transl_table=11 NZ_KK316854.1 RefSeq gene 55618 55782 . + . ID=gene-AL60_RS20045;Name=aprB;gbkey=Gene;gene=aprB;gene_biotype=protein_coding;locus_tag=AL60_RS20045;old_locus_tag=AL60_02959 NZ_KK316854.1 Protein Homology CDS 55618 55782 . + 0 ID=cds-WP_003907942.1;Parent=gene-AL60_RS20045;Dbxref=GenBank:WP_003907942.1;Name=WP_003907942.1;gbkey=CDS;gene=aprB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411092.1;locus_tag=AL60_RS20045;product=acid and phagosome regulated protein AprB;protein_id=WP_003907942.1;transl_table=11 NZ_KK316854.1 RefSeq gene 55866 56951 . + . ID=gene-AL60_RS20050;Name=AL60_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20050;old_locus_tag=AL60_02960 NZ_KK316854.1 Protein Homology CDS 55866 56951 . + 0 ID=cds-WP_003908846.1;Parent=gene-AL60_RS20050;Dbxref=GenBank:WP_003908846.1;Name=WP_003908846.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177878.1;locus_tag=AL60_RS20050;product=PE family protein;protein_id=WP_003908846.1;transl_table=11 NZ_KK316854.1 RefSeq gene 56976 58031 . - . ID=gene-AL60_RS20055;Name=AL60_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20055;old_locus_tag=AL60_02961 NZ_KK316854.1 Protein Homology CDS 56976 58031 . - 0 ID=cds-WP_003412325.1;Parent=gene-AL60_RS20055;Dbxref=GenBank:WP_003412325.1;Name=WP_003412325.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177879.1;locus_tag=AL60_RS20055;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_003412325.1;transl_table=11 NZ_KK316854.1 RefSeq gene 58048 58866 . - . ID=gene-AL60_RS20060;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=AL60_RS20060;old_locus_tag=AL60_02962 NZ_KK316854.1 Protein Homology CDS 58048 58866 . - 0 ID=cds-WP_012054319.1;Parent=gene-AL60_RS20060;Dbxref=GenBank:WP_012054319.1;Name=WP_012054319.1;Ontology_term=GO:1902358,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysW;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216914.1;locus_tag=AL60_RS20060;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_012054319.1;transl_table=11 NZ_KK316854.1 RefSeq gene 58863 59714 . - . ID=gene-AL60_RS20065;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=AL60_RS20065;old_locus_tag=AL60_02963 NZ_KK316854.1 Protein Homology CDS 58863 59714 . - 0 ID=cds-WP_003412332.1;Parent=gene-AL60_RS20065;Dbxref=GenBank:WP_003412332.1;Name=WP_003412332.1;Ontology_term=GO:1902358,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysT;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216915.1;locus_tag=AL60_RS20065;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_003412332.1;transl_table=11 NZ_KK316854.1 RefSeq gene 59711 60781 . - . ID=gene-AL60_RS20070;Name=subI;gbkey=Gene;gene=subI;gene_biotype=protein_coding;locus_tag=AL60_RS20070;old_locus_tag=AL60_02964 NZ_KK316854.1 Protein Homology CDS 59711 60781 . - 0 ID=cds-WP_003412335.1;Parent=gene-AL60_RS20070;Dbxref=GenBank:WP_003412335.1;Name=WP_003412335.1;gbkey=CDS;gene=subI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216916.1;locus_tag=AL60_RS20070;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_003412335.1;transl_table=11 NZ_KK316854.1 RefSeq gene 60795 61124 . + . ID=gene-AL60_RS20075;Name=AL60_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20075;old_locus_tag=AL60_02965 NZ_KK316854.1 Protein Homology CDS 60795 61124 . + 0 ID=cds-WP_003900513.1;Parent=gene-AL60_RS20075;Dbxref=GenBank:WP_003900513.1;Name=WP_003900513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216917.2;locus_tag=AL60_RS20075;product=hypothetical protein;protein_id=WP_003900513.1;transl_table=11 NZ_KK316854.1 RefSeq gene 61109 61312 . - . ID=gene-AL60_RS20080;Name=AL60_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20080;old_locus_tag=AL60_02966 NZ_KK316854.1 Protein Homology CDS 61109 61312 . - 0 ID=cds-WP_003412337.1;Parent=gene-AL60_RS20080;Dbxref=GenBank:WP_003412337.1;Name=WP_003412337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177670.1;locus_tag=AL60_RS20080;product=hypothetical protein;protein_id=WP_003412337.1;transl_table=11 NZ_KK316854.1 RefSeq gene 61482 63524 . + . ID=gene-AL60_RS20085;Name=AL60_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20085;old_locus_tag=AL60_02967 NZ_KK316854.1 Protein Homology CDS 61482 63524 . + 0 ID=cds-WP_003913344.1;Parent=gene-AL60_RS20085;Dbxref=GenBank:WP_003913344.1;Name=WP_003913344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875915.1;locus_tag=AL60_RS20085;product=glycoside hydrolase family 15 protein;protein_id=WP_003913344.1;transl_table=11 NZ_KK316854.1 RefSeq gene 63602 64357 . - . ID=gene-AL60_RS20090;Name=lppR;gbkey=Gene;gene=lppR;gene_biotype=protein_coding;locus_tag=AL60_RS20090;old_locus_tag=AL60_02968 NZ_KK316854.1 Protein Homology CDS 63602 64357 . - 0 ID=cds-WP_003412341.1;Parent=gene-AL60_RS20090;Dbxref=GenBank:WP_003412341.1;Name=WP_003412341.1;gbkey=CDS;gene=lppR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216919.1;locus_tag=AL60_RS20090;product=sensor domain-containing protein;protein_id=WP_003412341.1;transl_table=11 NZ_KK316854.1 RefSeq gene 64354 66315 . - . ID=gene-AL60_RS20095;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AL60_RS20095;old_locus_tag=AL60_02969 NZ_KK316854.1 Protein Homology CDS 64354 66315 . - 0 ID=cds-WP_003900516.1;Parent=gene-AL60_RS20095;Dbxref=GenBank:WP_003900516.1;Name=WP_003900516.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216920.1;locus_tag=AL60_RS20095;product=translation elongation factor 4;protein_id=WP_003900516.1;transl_table=11 NZ_KK316854.1 RefSeq gene 66303 66905 . + . ID=gene-AL60_RS20100;Name=AL60_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20100;old_locus_tag=AL60_02970 NZ_KK316854.1 Protein Homology CDS 66303 66905 . + 0 ID=cds-WP_003899311.1;Parent=gene-AL60_RS20100;Dbxref=GenBank:WP_003899311.1;Name=WP_003899311.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899311.1;locus_tag=AL60_RS20100;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_003899311.1;transl_table=11 NZ_KK316854.1 RefSeq gene 67076 67504 . - . ID=gene-AL60_RS20105;Name=AL60_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20105;old_locus_tag=AL60_02971 NZ_KK316854.1 Protein Homology CDS 67076 67504 . - 0 ID=cds-WP_003412347.1;Parent=gene-AL60_RS20105;Dbxref=GenBank:WP_003412347.1;Name=WP_003412347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216922.1;locus_tag=AL60_RS20105;product=CBS domain-containing protein;protein_id=WP_003412347.1;transl_table=11 NZ_KK316854.1 RefSeq gene 67764 68606 . + . ID=gene-AL60_RS20110;Name=AL60_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20110;old_locus_tag=AL60_02972 NZ_KK316854.1 Protein Homology CDS 67764 68606 . + 0 ID=cds-WP_003412350.1;Parent=gene-AL60_RS20110;Dbxref=GenBank:WP_003412350.1;Name=WP_003412350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216923.1;locus_tag=AL60_RS20110;product=Rv2407 family type 3 sulfatase;protein_id=WP_003412350.1;transl_table=11 NZ_KK316854.1 RefSeq pseudogene 69153 69356 . + . ID=gene-AL60_RS27640;Name=AL60_RS27640;end_range=69356,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27640;partial=true;pseudo=true NZ_KK316854.1 Protein Homology CDS 69153 69356 . + 0 ID=cds-AL60_RS27640;Parent=gene-AL60_RS27640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;end_range=69356,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL60_RS27640;partial=true;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316854.1 RefSeq gene 69582 70421 . - . ID=gene-AL60_RS20115;Name=AL60_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20115;old_locus_tag=AL60_02974 NZ_KK316854.1 Protein Homology CDS 69582 70421 . - 0 ID=cds-WP_003412357.1;Parent=gene-AL60_RS20115;Dbxref=GenBank:WP_003412357.1;Name=WP_003412357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216925.1;locus_tag=AL60_RS20115;product=transglutaminase-like domain-containing protein;protein_id=WP_003412357.1;transl_table=11 NZ_KK316854.1 RefSeq gene 70421 71398 . - . ID=gene-AL60_RS20120;Name=AL60_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20120;old_locus_tag=AL60_02975 NZ_KK316854.1 Protein Homology CDS 70421 71398 . - 0 ID=cds-WP_003412359.1;Parent=gene-AL60_RS20120;Dbxref=GenBank:WP_003412359.1;Name=WP_003412359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216926.1;locus_tag=AL60_RS20120;product=alpha-E domain-containing protein;protein_id=WP_003412359.1;transl_table=11 NZ_KK316854.1 RefSeq gene 71398 73053 . - . ID=gene-AL60_RS20125;Name=AL60_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20125;old_locus_tag=AL60_02976 NZ_KK316854.1 Protein Homology CDS 71398 73053 . - 0 ID=cds-WP_003412363.1;Parent=gene-AL60_RS20125;Dbxref=GenBank:WP_003412363.1;Name=WP_003412363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216927.1;locus_tag=AL60_RS20125;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_003412363.1;transl_table=11 NZ_KK316854.1 RefSeq gene 73163 73423 . + . ID=gene-AL60_RS20130;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AL60_RS20130;old_locus_tag=AL60_02977 NZ_KK316854.1 Protein Homology CDS 73163 73423 . + 0 ID=cds-WP_003899314.1;Parent=gene-AL60_RS20130;Dbxref=GenBank:WP_003899314.1;Name=WP_003899314.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216928.1;locus_tag=AL60_RS20130;product=30S ribosomal protein S20;protein_id=WP_003899314.1;transl_table=11 NZ_KK316854.1 RefSeq gene 73439 74389 . - . ID=gene-AL60_RS20135;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AL60_RS20135;old_locus_tag=AL60_02978 NZ_KK316854.1 Protein Homology CDS 73439 74389 . - 0 ID=cds-WP_003903885.1;Parent=gene-AL60_RS20135;Dbxref=GenBank:WP_003903885.1;Name=WP_003903885.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216929.3;locus_tag=AL60_RS20135;product=DNA polymerase III subunit delta;protein_id=WP_003903885.1;transl_table=11 NZ_KK316854.1 RefSeq gene 74420 75964 . - . ID=gene-AL60_RS20140;Name=AL60_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20140;old_locus_tag=AL60_02979 NZ_KK316854.1 Protein Homology CDS 74420 75964 . - 0 ID=cds-WP_003412371.1;Parent=gene-AL60_RS20140;Dbxref=GenBank:WP_003412371.1;Name=WP_003412371.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216930.1;locus_tag=AL60_RS20140;product=ComEC/Rec2 family competence protein;protein_id=WP_003412371.1;transl_table=11 NZ_KK316854.1 RefSeq gene 75979 76872 . - . ID=gene-AL60_RS20145;Name=AL60_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20145;old_locus_tag=AL60_02980 NZ_KK316854.1 Protein Homology CDS 75979 76872 . - 0 ID=cds-WP_003899316.1;Parent=gene-AL60_RS20145;Dbxref=GenBank:WP_003899316.1;Name=WP_003899316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216931.1;locus_tag=AL60_RS20145;product=ComEA family DNA-binding protein;protein_id=WP_003899316.1;transl_table=11 NZ_KK316854.1 RefSeq gene 77212 78438 . - . ID=gene-AL60_RS20150;Name=eis;gbkey=Gene;gene=eis;gene_biotype=protein_coding;locus_tag=AL60_RS20150;old_locus_tag=AL60_02981 NZ_KK316854.1 Protein Homology CDS 77212 78438 . - 0 ID=cds-WP_003412375.1;Parent=gene-AL60_RS20150;Dbxref=GenBank:WP_003412375.1;Name=WP_003412375.1;gbkey=CDS;gene=eis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950714.1;locus_tag=AL60_RS20150;product=enhanced intracellular survival protein Eis;protein_id=WP_003412375.1;transl_table=11 NZ_KK316854.1 RefSeq gene 78560 79402 . - . ID=gene-AL60_RS20155;Name=AL60_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20155;old_locus_tag=AL60_02982 NZ_KK316854.1 Protein Homology CDS 78560 79402 . - 0 ID=cds-WP_003412381.1;Parent=gene-AL60_RS20155;Dbxref=GenBank:WP_003412381.1;Name=WP_003412381.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216933.1;locus_tag=AL60_RS20155;product=DegV family protein;protein_id=WP_003412381.1;transl_table=11 NZ_KK316854.1 RefSeq gene 79483 80226 . - . ID=gene-AL60_RS20160;Name=octT;gbkey=Gene;gene=octT;gene_biotype=protein_coding;locus_tag=AL60_RS20160;old_locus_tag=AL60_02983 NZ_KK316854.1 Protein Homology CDS 79483 80226 . - 0 ID=cds-WP_003412384.1;Parent=gene-AL60_RS20160;Dbxref=GenBank:WP_003412384.1;Name=WP_003412384.1;Ontology_term=GO:0016414;gbkey=CDS;gene=octT;go_function=diglucosylglycerate octanoyltransferase activity|0016414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216934.1;locus_tag=AL60_RS20160;product=diglucosylglycerate octanoyltransferase;protein_id=WP_003412384.1;transl_table=11 NZ_KK316854.1 RefSeq gene 80216 80887 . - . ID=gene-AL60_RS20165;Name=gpgP;gbkey=Gene;gene=gpgP;gene_biotype=protein_coding;locus_tag=AL60_RS20165;old_locus_tag=AL60_02984 NZ_KK316854.1 Protein Homology CDS 80216 80887 . - 0 ID=cds-WP_003412388.1;Parent=gene-AL60_RS20165;Dbxref=GenBank:WP_003412388.1;Name=WP_003412388.1;gbkey=CDS;gene=gpgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216935.1;locus_tag=AL60_RS20165;product=glucosyl-3-phosphoglycerate phosphatase;protein_id=WP_003412388.1;transl_table=11 NZ_KK316854.1 RefSeq gene 80884 81264 . - . ID=gene-AL60_RS20170;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=AL60_RS20170;old_locus_tag=AL60_02985 NZ_KK316854.1 Protein Homology CDS 80884 81264 . - 0 ID=cds-WP_003412394.1;Parent=gene-AL60_RS20170;Dbxref=GenBank:WP_003412394.1;Name=WP_003412394.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216936.1;locus_tag=AL60_RS20170;product=ribosome silencing factor;protein_id=WP_003412394.1;transl_table=11 NZ_KK316854.1 RefSeq gene 81261 81905 . - . ID=gene-AL60_RS20175;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=AL60_RS20175;old_locus_tag=AL60_02986 NZ_KK316854.1 Protein Homology CDS 81261 81905 . - 0 ID=cds-WP_256382343.1;Parent=gene-AL60_RS20175;Dbxref=GenBank:WP_256382343.1;Name=WP_256382343.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007169525.1;locus_tag=AL60_RS20175;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_256382343.1;transl_table=11 NZ_KK316854.1 RefSeq gene 81932 82135 . - . ID=gene-AL60_RS27990;Name=AL60_RS27990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27990 NZ_KK316854.1 Protein Homology CDS 81932 82135 . - 0 ID=cds-WP_003412401.1;Parent=gene-AL60_RS27990;Dbxref=GenBank:WP_003412401.1;Name=WP_003412401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003412401.1;locus_tag=AL60_RS27990;product=hypothetical protein;protein_id=WP_003412401.1;transl_table=11 NZ_KK316854.1 RefSeq gene 82171 82443 . + . ID=gene-AL60_RS20180;Name=AL60_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20180;old_locus_tag=AL60_02987 NZ_KK316854.1 Protein Homology CDS 82171 82443 . + 0 ID=cds-WP_003412405.1;Parent=gene-AL60_RS20180;Dbxref=GenBank:WP_003412405.1;Name=WP_003412405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216938.1;locus_tag=AL60_RS20180;product=PIN domain-containing protein;protein_id=WP_003412405.1;transl_table=11 NZ_KK316854.1 RefSeq gene 82685 83731 . + . ID=gene-AL60_RS20185;Name=AL60_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20185;old_locus_tag=AL60_02988 NZ_KK316854.1 Protein Homology CDS 82685 83731 . + 0 ID=cds-WP_003412408.1;Parent=gene-AL60_RS20185;Dbxref=GenBank:WP_003412408.1;Name=WP_003412408.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216939.1;locus_tag=AL60_RS20185;product=class I SAM-dependent methyltransferase;protein_id=WP_003412408.1;transl_table=11 NZ_KK316854.1 RefSeq gene 83864 84865 . - . ID=gene-AL60_RS0105180;Name=AL60_RS0105180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105180;old_locus_tag=AL60_02989 NZ_KK316854.1 Protein Homology CDS 83864 84865 . - 0 ID=cds-WP_003909662.1;Parent=gene-AL60_RS0105180;Dbxref=GenBank:WP_003909662.1;Name=WP_003909662.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033542.1;locus_tag=AL60_RS0105180;product=IS110 family RNA-guided transposase;protein_id=WP_003909662.1;transl_table=11 NZ_KK316854.1 RefSeq gene 84954 86396 . - . ID=gene-AL60_RS20190;Name=AL60_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20190;old_locus_tag=AL60_02990 NZ_KK316854.1 Protein Homology CDS 84954 86396 . - 0 ID=cds-WP_003412513.1;Parent=gene-AL60_RS20190;Dbxref=GenBank:WP_003412513.1;Name=WP_003412513.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216941.1;locus_tag=AL60_RS20190;product=vWA domain-containing protein;protein_id=WP_003412513.1;transl_table=11 NZ_KK316854.1 RefSeq gene 86396 87271 . - . ID=gene-AL60_RS20195;Name=AL60_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20195;old_locus_tag=AL60_02991 NZ_KK316854.1 Protein Homology CDS 86396 87271 . - 0 ID=cds-WP_003412514.1;Parent=gene-AL60_RS20195;Dbxref=GenBank:WP_003412514.1;Name=WP_003412514.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216942.1;locus_tag=AL60_RS20195;product=AAA family ATPase;protein_id=WP_003412514.1;transl_table=11 NZ_KK316854.1 RefSeq gene 87318 88565 . - . ID=gene-AL60_RS20200;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=AL60_RS20200;old_locus_tag=AL60_02992 NZ_KK316854.1 Protein Homology CDS 87318 88565 . - 0 ID=cds-WP_003412516.1;Parent=gene-AL60_RS20200;Dbxref=GenBank:WP_003412516.1;Name=WP_003412516.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216943.1;locus_tag=AL60_RS20200;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_003412516.1;transl_table=11 NZ_KK316854.1 RefSeq pseudogene 88648 89033 . - . ID=gene-AL60_RS0105190;Name=AL60_RS0105190;end_range=89033,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0105190;partial=true;pseudo=true NZ_KK316854.1 Protein Homology CDS 88648 89033 . - 0 ID=cds-AL60_RS0105190;Parent=gene-AL60_RS0105190;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=89033,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908684.1;locus_tag=AL60_RS0105190;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_KK316854.1 RefSeq gene 89281 89868 . + . ID=gene-AL60_RS20210;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=AL60_RS20210;old_locus_tag=AL60_02994 NZ_KK316854.1 Protein Homology CDS 89281 89868 . + 0 ID=cds-WP_003412529.1;Parent=gene-AL60_RS20210;Dbxref=GenBank:WP_003412529.1;Name=WP_003412529.1;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216944.1;locus_tag=AL60_RS20210;product=peroxiredoxin AhpC;protein_id=WP_003412529.1;transl_table=11 NZ_KK316854.1 RefSeq gene 89894 90427 . + . ID=gene-AL60_RS20215;Name=ahpD;gbkey=Gene;gene=ahpD;gene_biotype=protein_coding;locus_tag=AL60_RS20215;old_locus_tag=AL60_02995 NZ_KK316854.1 Protein Homology CDS 89894 90427 . + 0 ID=cds-WP_003412536.1;Parent=gene-AL60_RS20215;Dbxref=GenBank:WP_003412536.1;Name=WP_003412536.1;gbkey=CDS;gene=ahpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216945.1;locus_tag=AL60_RS20215;product=alkyl hydroperoxide reductase;protein_id=WP_003412536.1;transl_table=11 NZ_KK316854.1 RefSeq gene 90424 91008 . - . ID=gene-AL60_RS20220;Name=AL60_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20220;old_locus_tag=AL60_02996 NZ_KK316854.1 Protein Homology CDS 90424 91008 . - 0 ID=cds-WP_003412549.1;Parent=gene-AL60_RS20220;Dbxref=GenBank:WP_003412549.1;Name=WP_003412549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177881.1;locus_tag=AL60_RS20220;product=PPE family protein;protein_id=WP_003412549.1;transl_table=11 NZ_KK316854.1 RefSeq gene 91055 91354 . - . ID=gene-AL60_RS20225;Name=AL60_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20225;old_locus_tag=AL60_02997 NZ_KK316854.1 Protein Homology CDS 91055 91354 . - 0 ID=cds-WP_003412551.1;Parent=gene-AL60_RS20225;Dbxref=GenBank:WP_003412551.1;Name=WP_003412551.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177882.1;locus_tag=AL60_RS20225;product=PE family protein;protein_id=WP_003412551.1;transl_table=11 NZ_KK316854.1 RefSeq gene 91525 91935 . - . ID=gene-AL60_RS20230;Name=AL60_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20230;old_locus_tag=AL60_02998 NZ_KK316854.1 Protein Homology CDS 91525 91935 . - 0 ID=cds-WP_003900520.1;Parent=gene-AL60_RS20230;Dbxref=GenBank:WP_003900520.1;Name=WP_003900520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216948.1;locus_tag=AL60_RS20230;product=hypothetical protein;protein_id=WP_003900520.1;transl_table=11 NZ_KK316854.1 RefSeq gene 91932 92222 . - . ID=gene-AL60_RS20235;Name=nrtS;gbkey=Gene;gene=nrtS;gene_biotype=protein_coding;locus_tag=AL60_RS20235;old_locus_tag=AL60_02999 NZ_KK316854.1 Protein Homology CDS 91932 92222 . - 0 ID=cds-WP_003412553.1;Parent=gene-AL60_RS20235;Dbxref=GenBank:WP_003412553.1;Name=WP_003412553.1;gbkey=CDS;gene=nrtS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216949.1;locus_tag=AL60_RS20235;product=nitrate/nitrite transporter NrtS;protein_id=WP_003412553.1;transl_table=11 NZ_KK316854.1 RefSeq gene 92203 93648 . - . ID=gene-AL60_RS20240;Name=AL60_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20240;old_locus_tag=AL60_03000 NZ_KK316854.1 Protein Homology CDS 92203 93648 . - 0 ID=cds-WP_003900521.1;Parent=gene-AL60_RS20240;Dbxref=GenBank:WP_003900521.1;Name=WP_003900521.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216950.1;locus_tag=AL60_RS20240;product=mechanosensitive ion channel domain-containing protein;protein_id=WP_003900521.1;transl_table=11 NZ_KK316854.1 RefSeq gene 93645 95837 . - . ID=gene-AL60_RS20245;Name=AL60_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20245;old_locus_tag=AL60_03001 NZ_KK316854.1 Protein Homology CDS 93645 95837 . - 0 ID=cds-WP_003412557.1;Parent=gene-AL60_RS20245;Dbxref=GenBank:WP_003412557.1;Name=WP_003412557.1;Ontology_term=GO:0009190,GO:0035556;gbkey=CDS;go_process=cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216951.1;locus_tag=AL60_RS20245;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003412557.1;transl_table=11 NZ_KK316854.1 RefSeq gene 96318 97232 . + . ID=gene-AL60_RS20250;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=AL60_RS20250;old_locus_tag=AL60_03002 NZ_KK316854.1 Protein Homology CDS 96318 97232 . + 0 ID=cds-WP_003412561.1;Parent=gene-AL60_RS20250;Dbxref=GenBank:WP_003412561.1;Name=WP_003412561.1;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216952.1;locus_tag=AL60_RS20250;product=ribokinase RbsK;protein_id=WP_003412561.1;transl_table=11 NZ_KK316854.1 RefSeq gene 97464 97883 . + . ID=gene-AL60_RS20255;Name=AL60_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20255;old_locus_tag=AL60_03003 NZ_KK316854.1 Protein Homology CDS 97464 97883 . + 0 ID=cds-WP_003412563.1;Parent=gene-AL60_RS20255;Dbxref=GenBank:WP_003412563.1;Name=WP_003412563.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216953.1;locus_tag=AL60_RS20255;product=methyltransferase family protein;protein_id=WP_003412563.1;transl_table=11 NZ_KK316854.1 RefSeq gene 97880 99886 . - . ID=gene-AL60_RS20260;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=AL60_RS20260;old_locus_tag=AL60_03004 NZ_KK316854.1 Protein Homology CDS 97880 99886 . - 0 ID=cds-WP_234712441.1;Parent=gene-AL60_RS20260;Dbxref=GenBank:WP_234712441.1;Name=WP_234712441.1;Ontology_term=GO:0008152,GO:0009435,GO:0003952,GO:0004359,GO:0005524;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,ATP binding|0005524||IEA;go_process=metabolic process|0008152||IEA,NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216954.2;locus_tag=AL60_RS20260;product=NAD(+) synthase;protein_id=WP_234712441.1;transl_table=11 NZ_KK316854.1 RefSeq gene 99797 100075 . + . ID=gene-AL60_RS27650;Name=AL60_RS27650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27650;old_locus_tag=AL60_03005 NZ_KK316854.1 Protein Homology CDS 99797 100075 . + 0 ID=cds-WP_010886145.1;Parent=gene-AL60_RS27650;Dbxref=GenBank:WP_010886145.1;Name=WP_010886145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177671.1;locus_tag=AL60_RS27650;product=hypothetical protein;protein_id=WP_010886145.1;transl_table=11 NZ_KK316854.1 RefSeq gene 100205 101335 . - . ID=gene-AL60_RS20265;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=AL60_RS20265;old_locus_tag=AL60_03006 NZ_KK316854.1 Protein Homology CDS 100205 101335 . - 0 ID=cds-WP_003906819.1;Parent=gene-AL60_RS20265;Dbxref=GenBank:WP_003906819.1;Name=WP_003906819.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216955.1;locus_tag=AL60_RS20265;product=glutamate 5-kinase;protein_id=WP_003906819.1;transl_table=11 NZ_KK316854.1 RefSeq gene 101335 102774 . - . ID=gene-AL60_RS20270;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=AL60_RS20270;old_locus_tag=AL60_03007 NZ_KK316854.1 Protein Homology CDS 101335 102774 . - 0 ID=cds-WP_003901405.1;Parent=gene-AL60_RS20270;Dbxref=GenBank:WP_003901405.1;Name=WP_003901405.1;Ontology_term=GO:0000166,GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=nucleotide binding|0000166||IEA,magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216956.1;locus_tag=AL60_RS20270;product=GTPase ObgE;protein_id=WP_003901405.1;transl_table=11 NZ_KK316854.1 RefSeq gene 102860 103120 . - . ID=gene-AL60_RS20275;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AL60_RS20275;old_locus_tag=AL60_03008 NZ_KK316854.1 Protein Homology CDS 102860 103120 . - 0 ID=cds-WP_003412574.1;Parent=gene-AL60_RS20275;Dbxref=GenBank:WP_003412574.1;Name=WP_003412574.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216957.1;locus_tag=AL60_RS20275;product=50S ribosomal protein L27;protein_id=WP_003412574.1;transl_table=11 NZ_KK316854.1 RefSeq gene 103135 103449 . - . ID=gene-AL60_RS20280;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AL60_RS20280;old_locus_tag=AL60_03009 NZ_KK316854.1 Protein Homology CDS 103135 103449 . - 0 ID=cds-WP_003412578.1;Parent=gene-AL60_RS20280;Dbxref=GenBank:WP_003412578.1;Name=WP_003412578.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216958.1;locus_tag=AL60_RS20280;product=50S ribosomal protein L21;protein_id=WP_003412578.1;transl_table=11 NZ_KK316854.1 RefSeq gene 103797 105272 . + . ID=gene-AL60_RS20285;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=AL60_RS20285;old_locus_tag=AL60_03010 NZ_KK316854.1 Protein Homology CDS 103797 105272 . + 0 ID=cds-WP_003412582.1;Parent=gene-AL60_RS20285;Dbxref=GenBank:WP_003412582.1;Name=WP_003412582.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;gene=dctA;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216959.1;locus_tag=AL60_RS20285;product=cation:dicarboxylate symporter family transporter;protein_id=WP_003412582.1;transl_table=11 NZ_KK316854.1 RefSeq gene 105211 108072 . - . ID=gene-AL60_RS20290;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=AL60_RS20290;old_locus_tag=AL60_03011 NZ_KK316854.1 Protein Homology CDS 105211 108072 . - 0 ID=cds-WP_003899322.1;Parent=gene-AL60_RS20290;Dbxref=GenBank:WP_003899322.1;Name=WP_003899322.1;Ontology_term=GO:0006397,GO:0003723,GO:0004519,GO:0004540,GO:0046872;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,endonuclease activity|0004519||IEA,RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=mRNA processing|0006397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216960.1;locus_tag=AL60_RS20290;product=ribonuclease E;protein_id=WP_003899322.1;transl_table=11 NZ_KK316854.1 RefSeq gene 108402 108812 . - . ID=gene-AL60_RS20295;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AL60_RS20295;old_locus_tag=AL60_03012 NZ_KK316854.1 Protein Homology CDS 108402 108812 . - 0 ID=cds-WP_003412592.1;Parent=gene-AL60_RS20295;Dbxref=GenBank:WP_003412592.1;Name=WP_003412592.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216961.1;locus_tag=AL60_RS20295;product=nucleoside-diphosphate kinase;protein_id=WP_003412592.1;transl_table=11 NZ_KK316854.1 RefSeq gene 108855 109226 . - . ID=gene-AL60_RS20300;Name=AL60_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20300;old_locus_tag=AL60_03013 NZ_KK316854.1 Protein Homology CDS 108855 109226 . - 0 ID=cds-WP_003906823.1;Parent=gene-AL60_RS20300;Dbxref=GenBank:WP_003906823.1;Name=WP_003906823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216962.1;locus_tag=AL60_RS20300;product=DUF4233 domain-containing protein;protein_id=WP_003906823.1;transl_table=11 NZ_KK316854.1 RefSeq gene 109223 110686 . - . ID=gene-AL60_RS20305;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=AL60_RS20305;old_locus_tag=AL60_03014 NZ_KK316854.1 Protein Homology CDS 109223 110686 . - 0 ID=cds-WP_003899324.1;Parent=gene-AL60_RS20305;Dbxref=GenBank:WP_003899324.1;Name=WP_003899324.1;Ontology_term=GO:0009396,GO:0046654,GO:0004326,GO:0008841;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,dihydrofolate synthase activity|0008841||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216963.1;locus_tag=AL60_RS20305;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_003899324.1;transl_table=11 NZ_KK316854.1 RefSeq gene 110683 113343 . - . ID=gene-AL60_RS20310;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=AL60_RS20310;old_locus_tag=AL60_03015 NZ_KK316854.1 Protein Homology CDS 110683 113343 . - 0 ID=cds-WP_003412604.1;Parent=gene-AL60_RS20310;Dbxref=GenBank:WP_003412604.1;Name=WP_003412604.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;gene=valS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908358.1;locus_tag=AL60_RS20310;product=valine--tRNA ligase;protein_id=WP_003412604.1;transl_table=11 NZ_KK316854.1 RefSeq gene 113401 114660 . - . ID=gene-AL60_RS20315;Name=AL60_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20315;old_locus_tag=AL60_03016 NZ_KK316854.1 Protein Homology CDS 113401 114660 . - 0 ID=cds-WP_003412609.1;Parent=gene-AL60_RS20315;Dbxref=GenBank:WP_003412609.1;Name=WP_003412609.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216965.1;locus_tag=AL60_RS20315;product=saccharopine dehydrogenase family protein;protein_id=WP_003412609.1;transl_table=11 NZ_KK316854.1 RefSeq gene 114750 115268 . - . ID=gene-AL60_RS20320;Name=rpfE;gbkey=Gene;gene=rpfE;gene_biotype=protein_coding;locus_tag=AL60_RS20320;old_locus_tag=AL60_03017 NZ_KK316854.1 Protein Homology CDS 114750 115268 . - 0 ID=cds-WP_003412613.1;Parent=gene-AL60_RS20320;Dbxref=GenBank:WP_003412613.1;Name=WP_003412613.1;gbkey=CDS;gene=rpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216966.1;locus_tag=AL60_RS20320;product=resuscitation-promoting factor protein RpfE;protein_id=WP_003412613.1;transl_table=11 NZ_KK316854.1 RefSeq gene 115350 115748 . + . ID=gene-AL60_RS20325;Name=AL60_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20325;old_locus_tag=AL60_03018 NZ_KK316854.1 Protein Homology CDS 115350 115748 . + 0 ID=cds-WP_003899327.1;Parent=gene-AL60_RS20325;Dbxref=GenBank:WP_003899327.1;Name=WP_003899327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216967.1;locus_tag=AL60_RS20325;product=hypothetical protein;protein_id=WP_003899327.1;transl_table=11 NZ_KK316854.1 RefSeq gene 115936 116082 . - . ID=gene-AL60_RS20330;Name=AL60_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20330;old_locus_tag=AL60_03019 NZ_KK316854.1 Protein Homology CDS 115936 116082 . - 0 ID=cds-WP_003908854.1;Parent=gene-AL60_RS20330;Dbxref=GenBank:WP_003908854.1;Name=WP_003908854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216968.1;locus_tag=AL60_RS20330;product=hypothetical protein;protein_id=WP_003908854.1;transl_table=11 NZ_KK316854.1 RefSeq gene 116106 116711 . - . ID=gene-AL60_RS20335;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AL60_RS20335;old_locus_tag=AL60_03020 NZ_KK316854.1 Protein Homology CDS 116106 116711 . - 0 ID=cds-WP_003412618.1;Parent=gene-AL60_RS20335;Dbxref=GenBank:WP_003412618.1;Name=WP_003412618.1;Ontology_term=GO:0006777,GO:0061603;gbkey=CDS;gene=mobA;go_function=molybdenum cofactor guanylyltransferase activity|0061603||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216969.1;locus_tag=AL60_RS20335;product=molybdenum cofactor guanylyltransferase;protein_id=WP_003412618.1;transl_table=11 NZ_KK316854.1 RefSeq gene 116713 117834 . - . ID=gene-AL60_RS20340;Name=AL60_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20340;old_locus_tag=AL60_03021 NZ_KK316854.1 Protein Homology CDS 116713 117834 . - 0 ID=cds-WP_003412624.1;Parent=gene-AL60_RS20340;Dbxref=GenBank:WP_003412624.1;Name=WP_003412624.1;Ontology_term=GO:0030976,GO:0046872;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216970.1;locus_tag=AL60_RS20340;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_003412624.1;transl_table=11 NZ_KK316854.1 RefSeq gene 117831 119792 . - . ID=gene-AL60_RS20345;Name=AL60_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20345;old_locus_tag=AL60_03022 NZ_KK316854.1 Protein Homology CDS 117831 119792 . - 0 ID=cds-WP_003412627.1;Parent=gene-AL60_RS20345;Dbxref=GenBank:WP_003412627.1;Name=WP_003412627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216971.1;locus_tag=AL60_RS20345;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_003412627.1;transl_table=11 NZ_KK316854.1 RefSeq gene 120024 121280 . - . ID=gene-AL60_RS20350;Name=AL60_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20350;old_locus_tag=AL60_03023 NZ_KK316854.1 Protein Homology CDS 120024 121280 . - 0 ID=cds-WP_003412631.1;Parent=gene-AL60_RS20350;Dbxref=GenBank:WP_003412631.1;Name=WP_003412631.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216972.1;locus_tag=AL60_RS20350;product=MFS transporter;protein_id=WP_003412631.1;transl_table=11 NZ_KK316854.1 RefSeq gene 121296 122576 . - . ID=gene-AL60_RS20355;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AL60_RS20355;old_locus_tag=AL60_03024 NZ_KK316854.1 Protein Homology CDS 121296 122576 . - 0 ID=cds-WP_003412634.1;Parent=gene-AL60_RS20355;Dbxref=GenBank:WP_003412634.1;Name=WP_003412634.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216973.1;locus_tag=AL60_RS20355;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_003412634.1;transl_table=11 NZ_KK316854.1 RefSeq gene 122867 123775 . + . ID=gene-AL60_RS20360;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=AL60_RS20360;old_locus_tag=AL60_03025 NZ_KK316854.1 Protein Homology CDS 122867 123775 . + 0 ID=cds-WP_003412639.1;Parent=gene-AL60_RS20360;Dbxref=GenBank:WP_003412639.1;Name=WP_003412639.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216974.1;locus_tag=AL60_RS20360;product=homocysteine S-methyltransferase;protein_id=WP_003412639.1;transl_table=11 NZ_KK316854.1 RefSeq gene 123942 125468 . + . ID=gene-AL60_RS20365;Name=jefA;gbkey=Gene;gene=jefA;gene_biotype=protein_coding;locus_tag=AL60_RS20365;old_locus_tag=AL60_03026 NZ_KK316854.1 Protein Homology CDS 123942 125468 . + 0 ID=cds-WP_003412642.1;Parent=gene-AL60_RS20365;Dbxref=GenBank:WP_003412642.1;Name=WP_003412642.1;gbkey=CDS;gene=jefA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216975.1;locus_tag=AL60_RS20365;product=multidrug efflux pump JefA;protein_id=WP_003412642.1;transl_table=11 NZ_KK316854.1 RefSeq gene 125619 126263 . - . ID=gene-AL60_RS20370;Name=clpP2;gbkey=Gene;gene=clpP2;gene_biotype=protein_coding;locus_tag=AL60_RS20370;old_locus_tag=AL60_03027 NZ_KK316854.1 Protein Homology CDS 125619 126263 . - 0 ID=cds-WP_003412648.1;Parent=gene-AL60_RS20370;Dbxref=GenBank:WP_003412648.1;Name=WP_003412648.1;gbkey=CDS;gene=clpP2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216976.1;locus_tag=AL60_RS20370;product=ATP-dependent CLP protease proteolytic subunit ClpP2;protein_id=WP_003412648.1;transl_table=11 NZ_KK316854.1 RefSeq gene 126260 126862 . - . ID=gene-AL60_RS20375;Name=clpP1;gbkey=Gene;gene=clpP1;gene_biotype=protein_coding;locus_tag=AL60_RS20375;old_locus_tag=AL60_03028 NZ_KK316854.1 Protein Homology CDS 126260 126862 . - 0 ID=cds-WP_003412650.1;Parent=gene-AL60_RS20375;Dbxref=GenBank:WP_003412650.1;Name=WP_003412650.1;gbkey=CDS;gene=clpP1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177883.1;locus_tag=AL60_RS20375;product=ATP-dependent CLP protease proteolytic subunit ClpP1;protein_id=WP_003412650.1;transl_table=11 NZ_KK316854.1 RefSeq gene 126979 128379 . - . ID=gene-AL60_RS20380;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AL60_RS20380;old_locus_tag=AL60_03029 NZ_KK316854.1 Protein Homology CDS 126979 128379 . - 0 ID=cds-WP_003899331.1;Parent=gene-AL60_RS20380;Dbxref=GenBank:WP_003899331.1;Name=WP_003899331.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216978.1;locus_tag=AL60_RS20380;product=trigger factor;protein_id=WP_003899331.1;transl_table=11 NZ_KK316854.1 RefSeq gene 128416 128492 . - . ID=gene-AL60_RS20385;Name=AL60_RS20385;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS20385;old_locus_tag=AL60_03030 NZ_KK316854.1 tRNAscan-SE tRNA 128416 128492 . - . ID=rna-AL60_RS20385;Parent=gene-AL60_RS20385;anticodon=(pos:complement(128456..128458));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS20385;product=tRNA-Pro NZ_KK316854.1 tRNAscan-SE exon 128416 128492 . - . ID=exon-AL60_RS20385-1;Parent=rna-AL60_RS20385;anticodon=(pos:complement(128456..128458));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS20385;product=tRNA-Pro NZ_KK316854.1 RefSeq gene 128629 128699 . + . ID=gene-AL60_RS20390;Name=AL60_RS20390;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS20390;old_locus_tag=AL60_03031 NZ_KK316854.1 tRNAscan-SE tRNA 128629 128699 . + . ID=rna-AL60_RS20390;Parent=gene-AL60_RS20390;anticodon=(pos:128661..128663);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS20390;product=tRNA-Gly NZ_KK316854.1 tRNAscan-SE exon 128629 128699 . + . ID=exon-AL60_RS20390-1;Parent=rna-AL60_RS20390;anticodon=(pos:128661..128663);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS20390;product=tRNA-Gly NZ_KK316854.1 RefSeq gene 128743 129927 . + . ID=gene-AL60_RS20395;Name=lipP;gbkey=Gene;gene=lipP;gene_biotype=protein_coding;locus_tag=AL60_RS20395;old_locus_tag=AL60_03032 NZ_KK316854.1 Protein Homology CDS 128743 129927 . + 0 ID=cds-WP_003412656.1;Parent=gene-AL60_RS20395;Dbxref=GenBank:WP_003412656.1;Name=WP_003412656.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipP;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216979.1;locus_tag=AL60_RS20395;product=serine hydrolase domain-containing protein;protein_id=WP_003412656.1;transl_table=11 NZ_KK316854.1 RefSeq gene 129947 130753 . - . ID=gene-AL60_RS20400;Name=AL60_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20400;old_locus_tag=AL60_03033 NZ_KK316854.1 Protein Homology CDS 129947 130753 . - 0 ID=cds-WP_003412657.1;Parent=gene-AL60_RS20400;Dbxref=GenBank:WP_003412657.1;Name=WP_003412657.1;Ontology_term=GO:0006281,GO:0006284,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0140078;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216980.1;locus_tag=AL60_RS20400;product=Fpg/Nei family DNA glycosylase;protein_id=WP_003412657.1;transl_table=11 NZ_KK316854.1 RefSeq gene 130759 131238 . - . ID=gene-AL60_RS20405;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=AL60_RS20405;old_locus_tag=AL60_03034 NZ_KK316854.1 Protein Homology CDS 130759 131238 . - 0 ID=cds-WP_003412660.1;Parent=gene-AL60_RS20405;Dbxref=GenBank:WP_003412660.1;Name=WP_003412660.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;gene=rpiB;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019738062.1;locus_tag=AL60_RS20405;product=ribose-5-phosphate isomerase;protein_id=WP_003412660.1;transl_table=11 NZ_KK316854.1 RefSeq gene 131349 131972 . - . ID=gene-AL60_RS20410;Name=AL60_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20410;old_locus_tag=AL60_03035 NZ_KK316854.1 Protein Homology CDS 131349 131972 . - 0 ID=cds-WP_003412664.1;Parent=gene-AL60_RS20410;Dbxref=GenBank:WP_003412664.1;Name=WP_003412664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216982.1;locus_tag=AL60_RS20410;product=Rv2466c family mycothiol-dependent reductase;protein_id=WP_003412664.1;transl_table=11 NZ_KK316854.1 RefSeq gene 132074 134659 . + . ID=gene-AL60_RS20415;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AL60_RS20415;old_locus_tag=AL60_03036 NZ_KK316854.1 Protein Homology CDS 132074 134659 . + 0 ID=cds-WP_003412666.1;Parent=gene-AL60_RS20415;Dbxref=GenBank:WP_003412666.1;Name=WP_003412666.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177885.1;locus_tag=AL60_RS20415;product=aminopeptidase N;protein_id=WP_003412666.1;transl_table=11 NZ_KK316854.1 RefSeq gene 134732 135199 . - . ID=gene-AL60_RS20420;Name=AL60_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20420;old_locus_tag=AL60_03037 NZ_KK316854.1 Protein Homology CDS 134732 135199 . - 0 ID=cds-WP_003904843.1;Parent=gene-AL60_RS20420;Dbxref=GenBank:WP_003904843.1;Name=WP_003904843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003904843.1;locus_tag=AL60_RS20420;product=DUF5130 domain-containing protein;protein_id=WP_003904843.1;transl_table=11 NZ_KK316854.1 RefSeq gene 135186 135419 . - . ID=gene-AL60_RS20425;Name=ctaJ;gbkey=Gene;gene=ctaJ;gene_biotype=protein_coding;locus_tag=AL60_RS20425;old_locus_tag=AL60_03038 NZ_KK316854.1 Protein Homology CDS 135186 135419 . - 0 ID=cds-WP_003412671.1;Parent=gene-AL60_RS20425;Dbxref=GenBank:WP_003412671.1;Name=WP_003412671.1;gbkey=CDS;gene=ctaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411168.1;locus_tag=AL60_RS20425;product=aa3-type cytochrome oxidase subunit CtaJ;protein_id=WP_003412671.1;transl_table=11 NZ_KK316854.1 RefSeq gene 135455 136123 . - . ID=gene-AL60_RS20430;Name=AL60_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20430;old_locus_tag=AL60_03039 NZ_KK316854.1 Protein Homology CDS 135455 136123 . - 0 ID=cds-WP_003899334.1;Parent=gene-AL60_RS20430;Dbxref=GenBank:WP_003899334.1;Name=WP_003899334.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216985.1;locus_tag=AL60_RS20430;product=HNH endonuclease;protein_id=WP_003899334.1;transl_table=11 NZ_KK316854.1 RefSeq gene 136266 136652 . + . ID=gene-AL60_RS20435;Name=glbO;gbkey=Gene;gene=glbO;gene_biotype=protein_coding;locus_tag=AL60_RS20435;old_locus_tag=AL60_03040 NZ_KK316854.1 Protein Homology CDS 136266 136652 . + 0 ID=cds-WP_003412688.1;Parent=gene-AL60_RS20435;Dbxref=GenBank:WP_003412688.1;Name=WP_003412688.1;gbkey=CDS;gene=glbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216986.1;locus_tag=AL60_RS20435;product=group 2 truncated hemoglobin GlbO;protein_id=WP_003412688.1;transl_table=11 NZ_KK316854.1 RefSeq gene 136652 138292 . + . ID=gene-AL60_RS20440;Name=aglA;gbkey=Gene;gene=aglA;gene_biotype=protein_coding;locus_tag=AL60_RS20440;old_locus_tag=AL60_03041 NZ_KK316854.1 Protein Homology CDS 136652 138292 . + 0 ID=cds-WP_003899336.1;Parent=gene-AL60_RS20440;Dbxref=GenBank:WP_003899336.1;Name=WP_003899336.1;gbkey=CDS;gene=aglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216987.1;locus_tag=AL60_RS20440;product=glycoside hydrolase family 13 protein;protein_id=WP_003899336.1;transl_table=11 NZ_KK316854.1 RefSeq gene 138360 138653 . + . ID=gene-AL60_RS20445;Name=AL60_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20445;old_locus_tag=AL60_03042 NZ_KK316854.1 Protein Homology CDS 138360 138653 . + 0 ID=cds-WP_003899337.1;Parent=gene-AL60_RS20445;Dbxref=GenBank:WP_003899337.1;Name=WP_003899337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216988.1;locus_tag=AL60_RS20445;product=hypothetical protein;protein_id=WP_003899337.1;transl_table=11 NZ_KK316854.1 RefSeq gene 138656 139372 . + . ID=gene-AL60_RS20450;Name=AL60_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20450;old_locus_tag=AL60_03043 NZ_KK316854.1 Protein Homology CDS 138656 139372 . + 0 ID=cds-WP_003412695.1;Parent=gene-AL60_RS20450;Dbxref=GenBank:WP_003412695.1;Name=WP_003412695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216989.1;locus_tag=AL60_RS20450;product=hypothetical protein;protein_id=WP_003412695.1;transl_table=11 NZ_KK316854.1 RefSeq gene 139404 140057 . - . ID=gene-AL60_RS20455;Name=AL60_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20455;old_locus_tag=AL60_03044 NZ_KK316854.1 Protein Homology CDS 139404 140057 . - 0 ID=cds-WP_003412698.1;Parent=gene-AL60_RS20455;Dbxref=GenBank:WP_003412698.1;Name=WP_003412698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216990.1;locus_tag=AL60_RS20455;product=DUF8010 domain-containing protein;protein_id=WP_003412698.1;transl_table=11 NZ_KK316854.1 RefSeq gene 140063 140479 . - . ID=gene-AL60_RS20460;Name=AL60_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20460;old_locus_tag=AL60_03045 NZ_KK316854.1 Protein Homology CDS 140063 140479 . - 0 ID=cds-WP_003412703.1;Parent=gene-AL60_RS20460;Dbxref=GenBank:WP_003412703.1;Name=WP_003412703.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216991.1;locus_tag=AL60_RS20460;product=acyl-CoA thioesterase;protein_id=WP_003412703.1;transl_table=11 NZ_KK316854.1 RefSeq gene 140476 145350 . - . ID=gene-AL60_RS20465;Name=gdh;gbkey=Gene;gene=gdh;gene_biotype=protein_coding;locus_tag=AL60_RS20465;old_locus_tag=AL60_03046 NZ_KK316854.1 Protein Homology CDS 140476 145350 . - 0 ID=cds-WP_003899340.1;Parent=gene-AL60_RS20465;Dbxref=GenBank:WP_003899340.1;Name=WP_003899340.1;Ontology_term=GO:0004352;gbkey=CDS;gene=gdh;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216992.1;locus_tag=AL60_RS20465;product=NAD-glutamate dehydrogenase;protein_id=WP_003899340.1;transl_table=11 NZ_KK316854.1 RefSeq gene 145454 147130 . - . ID=gene-AL60_RS20470;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=AL60_RS20470;old_locus_tag=AL60_03047 NZ_KK316854.1 Protein Homology CDS 145454 147130 . - 0 ID=cds-WP_003412708.1;Parent=gene-AL60_RS20470;Dbxref=GenBank:WP_003412708.1;Name=WP_003412708.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216993.1;locus_tag=AL60_RS20470;product=energy-dependent translational throttle protein EttA;protein_id=WP_003412708.1;transl_table=11 NZ_KK316854.1 RefSeq gene 147211 147717 . - . ID=gene-AL60_RS20475;Name=AL60_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20475;old_locus_tag=AL60_03048 NZ_KK316854.1 Protein Homology CDS 147211 147717 . - 0 ID=cds-WP_009938519.1;Parent=gene-AL60_RS20475;Dbxref=GenBank:WP_009938519.1;Name=WP_009938519.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900529.1;locus_tag=AL60_RS20475;product=single-stranded DNA-binding protein;protein_id=WP_009938519.1;transl_table=11 NZ_KK316854.1 RefSeq gene 148305 148628 . - . ID=gene-AL60_RS20480;Name=AL60_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20480;old_locus_tag=AL60_03049 NZ_KK316854.1 Protein Homology CDS 148305 148628 . - 0 ID=cds-WP_003902275.1;Parent=gene-AL60_RS20480;Dbxref=GenBank:WP_003902275.1;Name=WP_003902275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216997.1;locus_tag=AL60_RS20480;product=hypothetical protein;protein_id=WP_003902275.1;transl_table=11 NZ_KK316854.1 RefSeq gene 148644 151013 . - . ID=gene-AL60_RS20485;Name=AL60_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20485;old_locus_tag=AL60_03050 NZ_KK316854.1 Protein Homology CDS 148644 151013 . - 0 ID=cds-WP_003901413.1;Parent=gene-AL60_RS20485;Dbxref=GenBank:WP_003901413.1;Name=WP_003901413.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216998.1;locus_tag=AL60_RS20485;product=glycerol-3-phosphate 1-O-acyltransferase;protein_id=WP_003901413.1;transl_table=11 NZ_KK316854.1 RefSeq gene 151010 152752 . - . ID=gene-AL60_RS20490;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;locus_tag=AL60_RS20490;old_locus_tag=AL60_03051 NZ_KK316854.1 Protein Homology CDS 151010 152752 . - 0 ID=cds-WP_003899343.1;Parent=gene-AL60_RS20490;Dbxref=GenBank:WP_003899343.1;Name=WP_003899343.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;gene=plsC;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216999.1;locus_tag=AL60_RS20490;product=HAD-IB family hydrolase/lysophospholipid acyltransferase family protein;protein_id=WP_003899343.1;transl_table=11 NZ_KK316854.1 RefSeq gene 152749 154224 . - . ID=gene-AL60_RS20495;Name=AL60_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20495;old_locus_tag=AL60_03052 NZ_KK316854.1 Protein Homology CDS 152749 154224 . - 0 ID=cds-WP_003899345.1;Parent=gene-AL60_RS20495;Dbxref=GenBank:WP_003899345.1;Name=WP_003899345.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217000.1;locus_tag=AL60_RS20495;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003899345.1;transl_table=11 NZ_KK316854.1 RefSeq gene 154453 155718 . - . ID=gene-AL60_RS20500;Name=lipQ;gbkey=Gene;gene=lipQ;gene_biotype=protein_coding;locus_tag=AL60_RS20500;old_locus_tag=AL60_03053 NZ_KK316854.1 Protein Homology CDS 154453 155718 . - 0 ID=cds-WP_012054320.1;Parent=gene-AL60_RS20500;Dbxref=GenBank:WP_012054320.1;Name=WP_012054320.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipQ;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217001.1;locus_tag=AL60_RS20500;product=esterase LipQ;protein_id=WP_012054320.1;transl_table=11 NZ_KK316854.1 RefSeq gene 155906 155979 . + . ID=gene-AL60_RS20505;Name=AL60_RS20505;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS20505;old_locus_tag=AL60_03054 NZ_KK316854.1 tRNAscan-SE tRNA 155906 155979 . + . ID=rna-AL60_RS20505;Parent=gene-AL60_RS20505;anticodon=(pos:155940..155942);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS20505;product=tRNA-Arg NZ_KK316854.1 tRNAscan-SE exon 155906 155979 . + . ID=exon-AL60_RS20505-1;Parent=rna-AL60_RS20505;anticodon=(pos:155940..155942);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS20505;product=tRNA-Arg NZ_KK316854.1 RefSeq gene 156080 156850 . + . ID=gene-AL60_RS20510;Name=AL60_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20510;old_locus_tag=AL60_03055 NZ_KK316854.1 Protein Homology CDS 156080 156850 . + 0 ID=cds-WP_003412728.1;Parent=gene-AL60_RS20510;Dbxref=GenBank:WP_003412728.1;Name=WP_003412728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217002.1;locus_tag=AL60_RS20510;product=enoyl-CoA hydratase;protein_id=WP_003412728.1;transl_table=11 NZ_KK316854.1 RefSeq pseudogene 157031 159116 . - . ID=gene-AL60_RS20515;Name=AL60_RS20515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS20515;pseudo=true NZ_KK316854.1 Protein Homology CDS 157031 159116 . - 0 ID=cds-AL60_RS20515;Parent=gene-AL60_RS20515;Note=frameshifted;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177886.1;locus_tag=AL60_RS20515;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316854.1 RefSeq gene 159198 162539 . - . ID=gene-AL60_RS20520;Name=AL60_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20520;old_locus_tag=AL60_03057 NZ_KK316854.1 Protein Homology CDS 159198 162539 . - 0 ID=cds-WP_003902279.1;Parent=gene-AL60_RS20520;Dbxref=GenBank:WP_003902279.1;Name=WP_003902279.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303515.1;locus_tag=AL60_RS20520;product=LuxR family transcriptional regulator;protein_id=WP_003902279.1;transl_table=11 NZ_KK316854.1 RefSeq gene 162577 162876 . - . ID=gene-AL60_RS20525;Name=AL60_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20525;old_locus_tag=AL60_03058 NZ_KK316854.1 Protein Homology CDS 162577 162876 . - 0 ID=cds-WP_003899346.1;Parent=gene-AL60_RS20525;Dbxref=GenBank:WP_003899346.1;Name=WP_003899346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217005.1;locus_tag=AL60_RS20525;product=hypothetical protein;protein_id=WP_003899346.1;transl_table=11 NZ_KK316854.1 RefSeq gene 162985 167967 . - . ID=gene-AL60_RS20530;Name=AL60_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20530;old_locus_tag=AL60_03059 NZ_KK316854.1 Protein Homology CDS 162985 167967 . - 0 ID=cds-WP_010886147.1;Parent=gene-AL60_RS20530;Dbxref=GenBank:WP_010886147.1;Name=WP_010886147.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177887.1;locus_tag=AL60_RS20530;product=PE family protein;protein_id=WP_010886147.1;transl_table=11 NZ_KK316854.1 RefSeq gene 168054 168260 . - . ID=gene-AL60_RS0105210;Name=AL60_RS0105210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105210 NZ_KK316854.1 Protein Homology CDS 168054 168260 . - 0 ID=cds-WP_003899347.1;Parent=gene-AL60_RS0105210;Dbxref=GenBank:WP_003899347.1;Name=WP_003899347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030040.1;locus_tag=AL60_RS0105210;product=hypothetical protein;protein_id=WP_003899347.1;transl_table=11 NZ_KK316854.1 RefSeq gene 168396 169019 . + . ID=gene-AL60_RS20535;Name=AL60_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20535;old_locus_tag=AL60_03060 NZ_KK316854.1 Protein Homology CDS 168396 169019 . + 0 ID=cds-WP_003900858.1;Parent=gene-AL60_RS20535;Dbxref=GenBank:WP_003900858.1;Name=WP_003900858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217007.1;locus_tag=AL60_RS20535;product=TIGR00725 family protein;protein_id=WP_003900858.1;transl_table=11 NZ_KK316854.1 RefSeq gene 169009 169761 . + . ID=gene-AL60_RS20540;Name=AL60_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20540;old_locus_tag=AL60_03061 NZ_KK316854.1 Protein Homology CDS 169009 169761 . + 0 ID=cds-WP_003900859.1;Parent=gene-AL60_RS20540;Dbxref=GenBank:WP_003900859.1;Name=WP_003900859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217008.1;locus_tag=AL60_RS20540;product=thymidylate synthase family protein;protein_id=WP_003900859.1;transl_table=11 NZ_KK316854.1 RefSeq gene 169814 170035 . + . ID=gene-AL60_RS20545;Name=AL60_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20545;old_locus_tag=AL60_03062 NZ_KK316854.1 Protein Homology CDS 169814 170035 . + 0 ID=cds-WP_003412749.1;Parent=gene-AL60_RS20545;Dbxref=GenBank:WP_003412749.1;Name=WP_003412749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217009.1;locus_tag=AL60_RS20545;product=antitoxin;protein_id=WP_003412749.1;transl_table=11 NZ_KK316854.1 RefSeq gene 170041 170466 . + . ID=gene-AL60_RS20550;Name=AL60_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20550;old_locus_tag=AL60_03063 NZ_KK316854.1 Protein Homology CDS 170041 170466 . + 0 ID=cds-WP_003412752.1;Parent=gene-AL60_RS20550;Dbxref=GenBank:WP_003412752.1;Name=WP_003412752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217010.1;locus_tag=AL60_RS20550;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003412752.1;transl_table=11 NZ_KK316854.1 RefSeq gene 170489 171670 . - . ID=gene-AL60_RS20555;Name=bkdC;gbkey=Gene;gene=bkdC;gene_biotype=protein_coding;locus_tag=AL60_RS20555;old_locus_tag=AL60_03064 NZ_KK316854.1 Protein Homology CDS 170489 171670 . - 0 ID=cds-WP_003899351.1;Parent=gene-AL60_RS20555;Dbxref=GenBank:WP_003899351.1;Name=WP_003899351.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;gene=bkdC;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217011.1;locus_tag=AL60_RS20555;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_003899351.1;transl_table=11 NZ_KK316854.1 RefSeq gene 171667 172713 . - . ID=gene-AL60_RS20560;Name=bkdB;gbkey=Gene;gene=bkdB;gene_biotype=protein_coding;locus_tag=AL60_RS20560;old_locus_tag=AL60_03065 NZ_KK316854.1 Protein Homology CDS 171667 172713 . - 0 ID=cds-WP_003412757.1;Parent=gene-AL60_RS20560;Dbxref=GenBank:WP_003412757.1;Name=WP_003412757.1;gbkey=CDS;gene=bkdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217012.1;locus_tag=AL60_RS20560;product=3-methyl-2-oxobutanoate dehydrogenase subunit beta;protein_id=WP_003412757.1;transl_table=11 NZ_KK316854.1 RefSeq gene 172724 173827 . - . ID=gene-AL60_RS20565;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=AL60_RS20565;old_locus_tag=AL60_03066 NZ_KK316854.1 Protein Homology CDS 172724 173827 . - 0 ID=cds-WP_003412761.1;Parent=gene-AL60_RS20565;Dbxref=GenBank:WP_003412761.1;Name=WP_003412761.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217013.1;locus_tag=AL60_RS20565;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_003412761.1;transl_table=11 NZ_KK316854.1 RefSeq gene 174086 174907 . - . ID=gene-AL60_RS20570;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=AL60_RS20570;old_locus_tag=AL60_03067 NZ_KK316854.1 Protein Homology CDS 174086 174907 . - 0 ID=cds-WP_003412766.1;Parent=gene-AL60_RS20570;Dbxref=GenBank:WP_003412766.1;Name=WP_003412766.1;gbkey=CDS;gene=citE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217014.1;locus_tag=AL60_RS20570;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_003412766.1;transl_table=11 NZ_KK316854.1 RefSeq gene 174904 175461 . - . ID=gene-AL60_RS20575;Name=AL60_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20575;old_locus_tag=AL60_03068 NZ_KK316854.1 Protein Homology CDS 174904 175461 . - 0 ID=cds-WP_003412768.1;Parent=gene-AL60_RS20575;Dbxref=GenBank:WP_003412768.1;Name=WP_003412768.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217015.1;locus_tag=AL60_RS20575;product=MaoC family dehydratase;protein_id=WP_003412768.1;transl_table=11 NZ_KK316854.1 RefSeq gene 175458 176642 . - . ID=gene-AL60_RS20580;Name=AL60_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20580;old_locus_tag=AL60_03069 NZ_KK316854.1 Protein Homology CDS 175458 176642 . - 0 ID=cds-WP_003412771.1;Parent=gene-AL60_RS20580;Dbxref=GenBank:WP_003412771.1;Name=WP_003412771.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217016.1;locus_tag=AL60_RS20580;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003412771.1;transl_table=11 NZ_KK316854.1 RefSeq gene 176647 178611 . - . ID=gene-AL60_RS20585;Name=AL60_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20585;old_locus_tag=AL60_03070 NZ_KK316854.1 Protein Homology CDS 176647 178611 . - 0 ID=cds-WP_003899356.1;Parent=gene-AL60_RS20585;Dbxref=GenBank:WP_003899356.1;Name=WP_003899356.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217017.1;locus_tag=AL60_RS20585;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_003899356.1;transl_table=11 NZ_KK316854.1 RefSeq gene 178616 180205 . - . ID=gene-AL60_RS20590;Name=AL60_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20590;old_locus_tag=AL60_03071 NZ_KK316854.1 Protein Homology CDS 178616 180205 . - 0 ID=cds-WP_003412778.1;Parent=gene-AL60_RS20590;Dbxref=GenBank:WP_003412778.1;Name=WP_003412778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217018.1;locus_tag=AL60_RS20590;product=acetyl-/propionyl-CoA carboxylase subunit beta;protein_id=WP_003412778.1;transl_table=11 NZ_KK316854.1 RefSeq gene 180202 180858 . - . ID=gene-AL60_RS20595;Name=scoB;gbkey=Gene;gene=scoB;gene_biotype=protein_coding;locus_tag=AL60_RS20595;old_locus_tag=AL60_03072 NZ_KK316854.1 Protein Homology CDS 180202 180858 . - 0 ID=cds-WP_003412782.1;Parent=gene-AL60_RS20595;Dbxref=GenBank:WP_003412782.1;Name=WP_003412782.1;gbkey=CDS;gene=scoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217019.1;locus_tag=AL60_RS20595;product=CoA transferase subunit B;protein_id=WP_003412782.1;transl_table=11 NZ_KK316854.1 RefSeq gene 180855 181601 . - . ID=gene-AL60_RS20600;Name=scoA;gbkey=Gene;gene=scoA;gene_biotype=protein_coding;locus_tag=AL60_RS20600;old_locus_tag=AL60_03073 NZ_KK316854.1 Protein Homology CDS 180855 181601 . - 0 ID=cds-WP_003412786.1;Parent=gene-AL60_RS20600;Dbxref=GenBank:WP_003412786.1;Name=WP_003412786.1;gbkey=CDS;gene=scoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217020.1;locus_tag=AL60_RS20600;product=CoA transferase subunit A;protein_id=WP_003412786.1;transl_table=11 NZ_KK316854.1 RefSeq gene 181684 183327 . - . ID=gene-AL60_RS20605;Name=AL60_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20605;old_locus_tag=AL60_03074 NZ_KK316854.1 Protein Homology CDS 181684 183327 . - 0 ID=cds-WP_003899357.1;Parent=gene-AL60_RS20605;Dbxref=GenBank:WP_003899357.1;Name=WP_003899357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217021.1;locus_tag=AL60_RS20605;product=AMP-binding protein;protein_id=WP_003899357.1;transl_table=11 NZ_KK316854.1 RefSeq gene 183443 184090 . + . ID=gene-AL60_RS20610;Name=AL60_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20610;old_locus_tag=AL60_03075 NZ_KK316854.1 Protein Homology CDS 183443 184090 . + 0 ID=cds-WP_003412790.1;Parent=gene-AL60_RS20610;Dbxref=GenBank:WP_003412790.1;Name=WP_003412790.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217022.1;locus_tag=AL60_RS20610;product=SACE_7040 family transcriptional regulator;protein_id=WP_003412790.1;transl_table=11 NZ_KK316854.1 RefSeq gene 184169 184990 . + . ID=gene-AL60_RS20615;Name=AL60_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20615;old_locus_tag=AL60_03076 NZ_KK316854.1 Protein Homology CDS 184169 184990 . + 0 ID=cds-WP_003412795.1;Parent=gene-AL60_RS20615;Dbxref=GenBank:WP_003412795.1;Name=WP_003412795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217023.1;locus_tag=AL60_RS20615;product=MmpS family transport accessory protein;protein_id=WP_003412795.1;transl_table=11 NZ_KK316854.1 RefSeq gene 184987 186324 . - . ID=gene-AL60_RS20620;Name=AL60_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20620;old_locus_tag=AL60_03077 NZ_KK316854.1 Protein Homology CDS 184987 186324 . - 0 ID=cds-WP_003412798.1;Parent=gene-AL60_RS20620;Dbxref=GenBank:WP_003412798.1;Name=WP_003412798.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217024.1;locus_tag=AL60_RS20620;product=MFS transporter;protein_id=WP_003412798.1;transl_table=11 NZ_KK316854.1 RefSeq gene 186409 187215 . + . ID=gene-AL60_RS20625;Name=cmrA;gbkey=Gene;gene=cmrA;gene_biotype=protein_coding;locus_tag=AL60_RS20625;old_locus_tag=AL60_03078 NZ_KK316854.1 Protein Homology CDS 186409 187215 . + 0 ID=cds-WP_003412799.1;Parent=gene-AL60_RS20625;Dbxref=GenBank:WP_003412799.1;Name=WP_003412799.1;Note=Catalyzes the final step in mycolic acid biosynthesis.;Ontology_term=GO:0071768;gbkey=CDS;gene=cmrA;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217025.1;locus_tag=AL60_RS20625;product=mycolate reductase;protein_id=WP_003412799.1;transl_table=11 NZ_KK316854.1 RefSeq gene 187219 188820 . - . ID=gene-AL60_RS20630;Name=AL60_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20630;old_locus_tag=AL60_03079 NZ_KK316854.1 Protein Homology CDS 187219 188820 . - 0 ID=cds-WP_003412803.1;Parent=gene-AL60_RS20630;Dbxref=GenBank:WP_003412803.1;Name=WP_003412803.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217026.1;locus_tag=AL60_RS20630;product=helicase HerA-like C-terminal domain-containing protein;protein_id=WP_003412803.1;transl_table=11 NZ_KK316854.1 RefSeq gene 188888 189535 . + . ID=gene-AL60_RS20635;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AL60_RS20635;old_locus_tag=AL60_03080 NZ_KK316854.1 Protein Homology CDS 188888 189535 . + 0 ID=cds-WP_003899361.1;Parent=gene-AL60_RS20635;Dbxref=GenBank:WP_003899361.1;Name=WP_003899361.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217027.1;locus_tag=AL60_RS20635;product=oligoribonuclease;protein_id=WP_003899361.1;transl_table=11 NZ_KK316854.1 RefSeq gene 189585 189660 . + . ID=gene-AL60_RS20640;Name=AL60_RS20640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS20640;old_locus_tag=AL60_03081 NZ_KK316854.1 tRNAscan-SE tRNA 189585 189660 . + . ID=rna-AL60_RS20640;Parent=gene-AL60_RS20640;anticodon=(pos:189618..189620);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS20640;product=tRNA-His NZ_KK316854.1 tRNAscan-SE exon 189585 189660 . + . ID=exon-AL60_RS20640-1;Parent=rna-AL60_RS20640;anticodon=(pos:189618..189620);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS20640;product=tRNA-His NZ_KK316854.1 RefSeq pseudogene 190287 190845 . - . ID=gene-AL60_RS20645;Name=AL60_RS20645;end_range=190845,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS20645;old_locus_tag=AL60_03082;partial=true;pseudo=true NZ_KK316854.1 Protein Homology CDS 190287 190845 . - 1 ID=cds-AL60_RS20645;Parent=gene-AL60_RS20645;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=190845,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL60_RS20645;partial=true;product=IS256-like element IS1081 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_KK316855.1 1 152419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316855.1 RefSeq region 1 152419 . + . ID=NZ_KK316855.1:1..152419;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316855.1 RefSeq pseudogene 1 542 . - . ID=gene-AL60_RS0105220;Name=AL60_RS0105220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0105220;partial=true;pseudo=true;start_range=.,1 NZ_KK316855.1 Protein Homology CDS 1 542 . - 0 ID=cds-AL60_RS0105220;Parent=gene-AL60_RS0105220;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL60_RS0105220;partial=true;product=IS256-like element IS1081 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_KK316855.1 RefSeq gene 900 1322 . + . ID=gene-AL60_RS20655;Name=AL60_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20655;old_locus_tag=AL60_03084 NZ_KK316855.1 Protein Homology CDS 900 1322 . + 0 ID=cds-WP_003412921.1;Parent=gene-AL60_RS20655;Dbxref=GenBank:WP_003412921.1;Name=WP_003412921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217029.1;locus_tag=AL60_RS20655;product=hypothetical protein;protein_id=WP_003412921.1;transl_table=11 NZ_KK316855.1 RefSeq gene 1616 2077 . - . ID=gene-AL60_RS20660;Name=AL60_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20660;old_locus_tag=AL60_03085 NZ_KK316855.1 Protein Homology CDS 1616 2077 . - 0 ID=cds-WP_003899362.1;Parent=gene-AL60_RS20660;Dbxref=GenBank:WP_003899362.1;Name=WP_003899362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217030.1;locus_tag=AL60_RS20660;product=DUF4411 family protein;protein_id=WP_003899362.1;transl_table=11 NZ_KK316855.1 RefSeq gene 2083 3330 . - . ID=gene-AL60_RS20665;Name=AL60_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20665;old_locus_tag=AL60_03086 NZ_KK316855.1 Protein Homology CDS 2083 3330 . - 0 ID=cds-WP_003412926.1;Parent=gene-AL60_RS20665;Dbxref=GenBank:WP_003412926.1;Name=WP_003412926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217031.1;locus_tag=AL60_RS20665;product=XRE family transcriptional regulator;protein_id=WP_003412926.1;transl_table=11 NZ_KK316855.1 RefSeq gene 3449 4252 . - . ID=gene-AL60_RS20670;Name=AL60_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20670;old_locus_tag=AL60_03087 NZ_KK316855.1 Protein Homology CDS 3449 4252 . - 0 ID=cds-WP_003412932.1;Parent=gene-AL60_RS20670;Dbxref=GenBank:WP_003412932.1;Name=WP_003412932.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217032.2;locus_tag=AL60_RS20670;product=helix-turn-helix transcriptional regulator;protein_id=WP_003412932.1;transl_table=11 NZ_KK316855.1 RefSeq gene 4249 4500 . - . ID=gene-AL60_RS20675;Name=AL60_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20675;old_locus_tag=AL60_03088 NZ_KK316855.1 Protein Homology CDS 4249 4500 . - 0 ID=cds-WP_003412936.1;Parent=gene-AL60_RS20675;Dbxref=GenBank:WP_003412936.1;Name=WP_003412936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217033.1;locus_tag=AL60_RS20675;product=hypothetical protein;protein_id=WP_003412936.1;transl_table=11 NZ_KK316855.1 RefSeq gene 4848 6074 . - . ID=gene-AL60_RS20680;Name=ldtMt2;gbkey=Gene;gene=ldtMt2;gene_biotype=protein_coding;locus_tag=AL60_RS20680;old_locus_tag=AL60_03089 NZ_KK316855.1 Protein Homology CDS 4848 6074 . - 0 ID=cds-WP_003412938.1;Parent=gene-AL60_RS20680;Dbxref=GenBank:WP_003412938.1;Name=WP_003412938.1;gbkey=CDS;gene=ldtMt2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217034.1;locus_tag=AL60_RS20680;product=L%2CD-transpeptidase LdtMt2;protein_id=WP_003412938.1;transl_table=11 NZ_KK316855.1 RefSeq gene 6233 6305 . + . ID=gene-AL60_RS20685;Name=AL60_RS20685;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS20685;old_locus_tag=AL60_03090 NZ_KK316855.1 tRNAscan-SE tRNA 6233 6305 . + . ID=rna-AL60_RS20685;Parent=gene-AL60_RS20685;anticodon=(pos:6266..6268);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS20685;product=tRNA-Lys NZ_KK316855.1 tRNAscan-SE exon 6233 6305 . + . ID=exon-AL60_RS20685-1;Parent=rna-AL60_RS20685;anticodon=(pos:6266..6268);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS20685;product=tRNA-Lys NZ_KK316855.1 RefSeq gene 6524 8002 . + . ID=gene-AL60_RS20690;Name=AL60_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20690;old_locus_tag=AL60_03091 NZ_KK316855.1 Protein Homology CDS 6524 8002 . + 0 ID=cds-WP_003900842.1;Parent=gene-AL60_RS20690;Dbxref=GenBank:WP_003900842.1;Name=WP_003900842.1;Ontology_term=GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177888.1;locus_tag=AL60_RS20690;product=PecA family PE domain-processing aspartic protease;protein_id=WP_003900842.1;transl_table=11 NZ_KK316855.1 RefSeq gene 8127 8354 . - . ID=gene-AL60_RS20695;Name=AL60_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20695;old_locus_tag=AL60_03092 NZ_KK316855.1 Protein Homology CDS 8127 8354 . - 0 ID=cds-WP_003412942.1;Parent=gene-AL60_RS20695;Dbxref=GenBank:WP_003412942.1;Name=WP_003412942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217036.1;locus_tag=AL60_RS20695;product=DUF3618 domain-containing protein;protein_id=WP_003412942.1;transl_table=11 NZ_KK316855.1 RefSeq gene 8423 8896 . + . ID=gene-AL60_RS20700;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=AL60_RS20700;old_locus_tag=AL60_03093 NZ_KK316855.1 Protein Homology CDS 8423 8896 . + 0 ID=cds-WP_003412944.1;Parent=gene-AL60_RS20700;Dbxref=GenBank:WP_003412944.1;Name=WP_003412944.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217037.1;locus_tag=AL60_RS20700;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_003412944.1;transl_table=11 NZ_KK316855.1 RefSeq gene 8868 10280 . - . ID=gene-AL60_RS20705;Name=AL60_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20705;old_locus_tag=AL60_03094 NZ_KK316855.1 Protein Homology CDS 8868 10280 . - 0 ID=cds-WP_003412946.1;Parent=gene-AL60_RS20705;Dbxref=GenBank:WP_003412946.1;Name=WP_003412946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217038.1;locus_tag=AL60_RS20705;product=dipeptidase;protein_id=WP_003412946.1;transl_table=11 NZ_KK316855.1 RefSeq gene 10277 10669 . - . ID=gene-AL60_RS20710;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=AL60_RS20710;old_locus_tag=AL60_03095 NZ_KK316855.1 Protein Homology CDS 10277 10669 . - 0 ID=cds-WP_003412952.1;Parent=gene-AL60_RS20710;Dbxref=GenBank:WP_003412952.1;Name=WP_003412952.1;gbkey=CDS;gene=acpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217039.1;locus_tag=AL60_RS20710;product=holo-ACP synthase AcpS;protein_id=WP_003412952.1;transl_table=11 NZ_KK316855.1 RefSeq gene 10862 20071 . - . ID=gene-AL60_RS20715;Name=fas;gbkey=Gene;gene=fas;gene_biotype=protein_coding;locus_tag=AL60_RS20715;old_locus_tag=AL60_03096 NZ_KK316855.1 Protein Homology CDS 10862 20071 . - 0 ID=cds-WP_003900843.1;Parent=gene-AL60_RS20715;Dbxref=GenBank:WP_003900843.1;Name=WP_003900843.1;gbkey=CDS;gene=fas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217040.1;locus_tag=AL60_RS20715;product=fatty acid synthase;protein_id=WP_003900843.1;transl_table=11 NZ_KK316855.1 RefSeq gene 20591 21313 . - . ID=gene-AL60_RS20720;Name=AL60_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20720;old_locus_tag=AL60_03097 NZ_KK316855.1 Protein Homology CDS 20591 21313 . - 0 ID=cds-WP_003412957.1;Parent=gene-AL60_RS20720;Dbxref=GenBank:WP_003412957.1;Name=WP_003412957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217041.1;locus_tag=AL60_RS20720;product=DUF1906 domain-containing protein;protein_id=WP_003412957.1;transl_table=11 NZ_KK316855.1 RefSeq gene 21830 22057 . + . ID=gene-AL60_RS20725;Name=AL60_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20725;old_locus_tag=AL60_03098 NZ_KK316855.1 Protein Homology CDS 21830 22057 . + 0 ID=cds-WP_003412960.1;Parent=gene-AL60_RS20725;Dbxref=GenBank:WP_003412960.1;Name=WP_003412960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217042.1;locus_tag=AL60_RS20725;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003412960.1;transl_table=11 NZ_KK316855.1 RefSeq gene 22054 22455 . + . ID=gene-AL60_RS20730;Name=AL60_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20730;old_locus_tag=AL60_03099 NZ_KK316855.1 Protein Homology CDS 22054 22455 . + 0 ID=cds-WP_003412963.1;Parent=gene-AL60_RS20730;Dbxref=GenBank:WP_003412963.1;Name=WP_003412963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217043.1;locus_tag=AL60_RS20730;product=PIN domain-containing protein;protein_id=WP_003412963.1;transl_table=11 NZ_KK316855.1 RefSeq gene 22490 23410 . - . ID=gene-AL60_RS20735;Name=mrr;gbkey=Gene;gene=mrr;gene_biotype=protein_coding;locus_tag=AL60_RS20735;old_locus_tag=AL60_03100 NZ_KK316855.1 Protein Homology CDS 22490 23410 . - 0 ID=cds-WP_003412965.1;Parent=gene-AL60_RS20735;Dbxref=GenBank:WP_003412965.1;Name=WP_003412965.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;gene=mrr;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217044.1;locus_tag=AL60_RS20735;product=restriction endonuclease;protein_id=WP_003412965.1;transl_table=11 NZ_KK316855.1 RefSeq gene 23751 23996 . - . ID=gene-AL60_RS27215;Name=AL60_RS27215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27215 NZ_KK316855.1 Protein Homology CDS 23751 23996 . - 0 ID=cds-WP_071854223.1;Parent=gene-AL60_RS27215;Dbxref=GenBank:WP_071854223.1;Name=WP_071854223.1;Ontology_term=GO:0001558,GO:0003677,GO:0003700,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of cell growth|0001558||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014588586.1;locus_tag=AL60_RS27215;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_071854223.1;transl_table=11 NZ_KK316855.1 RefSeq gene 24055 25005 . + . ID=gene-AL60_RS20740;Name=AL60_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20740;old_locus_tag=AL60_03101 NZ_KK316855.1 Protein Homology CDS 24055 25005 . + 0 ID=cds-WP_003911916.1;Parent=gene-AL60_RS20740;Dbxref=GenBank:WP_003911916.1;Name=WP_003911916.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019830685.1;locus_tag=AL60_RS20740;product=ERCC4 domain-containing protein;protein_id=WP_003911916.1;transl_table=11 NZ_KK316855.1 RefSeq gene 25006 25425 . - . ID=gene-AL60_RS20745;Name=AL60_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20745;old_locus_tag=AL60_03102 NZ_KK316855.1 Protein Homology CDS 25006 25425 . - 0 ID=cds-WP_003412970.1;Parent=gene-AL60_RS20745;Dbxref=GenBank:WP_003412970.1;Name=WP_003412970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217046.1;locus_tag=AL60_RS20745;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003412970.1;transl_table=11 NZ_KK316855.1 RefSeq gene 25422 25646 . - . ID=gene-AL60_RS20750;Name=AL60_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20750;old_locus_tag=AL60_03103 NZ_KK316855.1 Protein Homology CDS 25422 25646 . - 0 ID=cds-WP_003412975.1;Parent=gene-AL60_RS20750;Dbxref=GenBank:WP_003412975.1;Name=WP_003412975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177672.1;locus_tag=AL60_RS20750;product=antitoxin VapB39;protein_id=WP_003412975.1;transl_table=11 NZ_KK316855.1 RefSeq gene 25677 28520 . - . ID=gene-AL60_RS20755;Name=AL60_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20755;old_locus_tag=AL60_03104 NZ_KK316855.1 Protein Homology CDS 25677 28520 . - 0 ID=cds-WP_003899363.1;Parent=gene-AL60_RS20755;Dbxref=GenBank:WP_003899363.1;Name=WP_003899363.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177889.1;locus_tag=AL60_RS20755;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_003899363.1;transl_table=11 NZ_KK316855.1 RefSeq gene 28592 28993 . - . ID=gene-AL60_RS20760;Name=AL60_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20760;old_locus_tag=AL60_03105 NZ_KK316855.1 Protein Homology CDS 28592 28993 . - 0 ID=cds-WP_003412981.1;Parent=gene-AL60_RS20760;Dbxref=GenBank:WP_003412981.1;Name=WP_003412981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217048.1;locus_tag=AL60_RS20760;product=hypothetical protein;protein_id=WP_003412981.1;transl_table=11 NZ_KK316855.1 RefSeq gene 28993 29463 . - . ID=gene-AL60_RS20765;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AL60_RS20765;old_locus_tag=AL60_03106 NZ_KK316855.1 Protein Homology CDS 28993 29463 . - 0 ID=cds-WP_003899364.1;Parent=gene-AL60_RS20765;Dbxref=GenBank:WP_003899364.1;Name=WP_003899364.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217049.1;locus_tag=AL60_RS20765;product=transcription antitermination factor NusB;protein_id=WP_003899364.1;transl_table=11 NZ_KK316855.1 RefSeq gene 29466 30029 . - . ID=gene-AL60_RS20770;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AL60_RS20770;old_locus_tag=AL60_03107 NZ_KK316855.1 Protein Homology CDS 29466 30029 . - 0 ID=cds-WP_003412989.1;Parent=gene-AL60_RS20770;Dbxref=GenBank:WP_003412989.1;Name=WP_003412989.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011559756.1;locus_tag=AL60_RS20770;product=elongation factor P;protein_id=WP_003412989.1;transl_table=11 NZ_KK316855.1 RefSeq gene 30039 31157 . - . ID=gene-AL60_RS20775;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=AL60_RS20775;old_locus_tag=AL60_03108 NZ_KK316855.1 Protein Homology CDS 30039 31157 . - 0 ID=cds-WP_003412996.1;Parent=gene-AL60_RS20775;Dbxref=GenBank:WP_003412996.1;Name=WP_003412996.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;gene=pepQ;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217051.1;locus_tag=AL60_RS20775;product=M24 family metallopeptidase;protein_id=WP_003412996.1;transl_table=11 NZ_KK316855.1 RefSeq gene 31191 31883 . + . ID=gene-AL60_RS20780;Name=AL60_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20780;old_locus_tag=AL60_03109 NZ_KK316855.1 Protein Homology CDS 31191 31883 . + 0 ID=cds-WP_003412998.1;Parent=gene-AL60_RS20780;Dbxref=GenBank:WP_003412998.1;Name=WP_003412998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217052.1;locus_tag=AL60_RS20780;product=B-4DMT family transporter;protein_id=WP_003412998.1;transl_table=11 NZ_KK316855.1 RefSeq gene 31887 32330 . - . ID=gene-AL60_RS20785;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=AL60_RS20785;old_locus_tag=AL60_03110 NZ_KK316855.1 Protein Homology CDS 31887 32330 . - 0 ID=cds-WP_003413001.1;Parent=gene-AL60_RS20785;Dbxref=GenBank:WP_003413001.1;Name=WP_003413001.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217053.1;locus_tag=AL60_RS20785;product=type II 3-dehydroquinate dehydratase;protein_id=WP_003413001.1;transl_table=11 NZ_KK316855.1 RefSeq gene 32327 33415 . - . ID=gene-AL60_RS20790;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AL60_RS20790;old_locus_tag=AL60_03111 NZ_KK316855.1 Protein Homology CDS 32327 33415 . - 0 ID=cds-WP_003413008.1;Parent=gene-AL60_RS20790;Dbxref=GenBank:WP_003413008.1;Name=WP_003413008.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217054.1;locus_tag=AL60_RS20790;product=3-dehydroquinate synthase;protein_id=WP_003413008.1;transl_table=11 NZ_KK316855.1 RefSeq gene 33412 33942 . - . ID=gene-AL60_RS20795;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AL60_RS20795;old_locus_tag=AL60_03112 NZ_KK316855.1 Protein Homology CDS 33412 33942 . - 0 ID=cds-WP_003413021.1;Parent=gene-AL60_RS20795;Dbxref=GenBank:WP_003413021.1;Name=WP_003413021.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217055.1;locus_tag=AL60_RS20795;product=shikimate kinase AroK;protein_id=WP_003413021.1;transl_table=11 NZ_KK316855.1 RefSeq gene 33946 35151 . - . ID=gene-AL60_RS20800;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AL60_RS20800;old_locus_tag=AL60_03113 NZ_KK316855.1 Protein Homology CDS 33946 35151 . - 0 ID=cds-WP_003413027.1;Parent=gene-AL60_RS20800;Dbxref=GenBank:WP_003413027.1;Name=WP_003413027.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217056.1;locus_tag=AL60_RS20800;product=chorismate synthase;protein_id=WP_003413027.1;transl_table=11 NZ_KK316855.1 RefSeq gene 35259 35573 . + . ID=gene-AL60_RS0105230;Name=AL60_RS0105230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105230;old_locus_tag=AL60_03114 NZ_KK316855.1 Protein Homology CDS 35259 35573 . + 0 ID=cds-WP_009937839.1;Parent=gene-AL60_RS0105230;Dbxref=GenBank:WP_009937839.1;Name=WP_009937839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293767.1;locus_tag=AL60_RS0105230;product=hypothetical protein;protein_id=WP_009937839.1;transl_table=11 NZ_KK316855.1 RefSeq gene 35869 37080 . + . ID=gene-AL60_RS20805;Name=AL60_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20805;old_locus_tag=AL60_03115 NZ_KK316855.1 Protein Homology CDS 35869 37080 . + 0 ID=cds-WP_003900845.1;Parent=gene-AL60_RS20805;Dbxref=GenBank:WP_003900845.1;Name=WP_003900845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217058.1;locus_tag=AL60_RS20805;product=alpha/beta hydrolase family protein;protein_id=WP_003900845.1;transl_table=11 NZ_KK316855.1 RefSeq gene 37207 37866 . + . ID=gene-AL60_RS20810;Name=lppA;gbkey=Gene;gene=lppA;gene_biotype=protein_coding;locus_tag=AL60_RS20810;old_locus_tag=AL60_03116 NZ_KK316855.1 Protein Homology CDS 37207 37866 . + 0 ID=cds-WP_003900846.1;Parent=gene-AL60_RS20810;Dbxref=GenBank:WP_003900846.1;Name=WP_003900846.1;gbkey=CDS;gene=lppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217059.1;locus_tag=AL60_RS20810;product=LppA family lipoprotein;protein_id=WP_003900846.1;transl_table=11 NZ_KK316855.1 RefSeq gene 37863 38525 . + . ID=gene-AL60_RS20815;Name=lppB;gbkey=Gene;gene=lppB;gene_biotype=protein_coding;locus_tag=AL60_RS20815;old_locus_tag=AL60_03117 NZ_KK316855.1 Protein Homology CDS 37863 38525 . + 0 ID=cds-WP_003900848.1;Parent=gene-AL60_RS20815;Dbxref=GenBank:WP_003900848.1;Name=WP_003900848.1;gbkey=CDS;gene=lppB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217060.1;locus_tag=AL60_RS20815;product=LppA family lipoprotein;protein_id=WP_003900848.1;transl_table=11 NZ_KK316855.1 RefSeq gene 38522 38800 . + . ID=gene-AL60_RS20820;Name=AL60_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20820;old_locus_tag=AL60_03118 NZ_KK316855.1 Protein Homology CDS 38522 38800 . + 0 ID=cds-WP_003901422.1;Parent=gene-AL60_RS20820;Dbxref=GenBank:WP_003901422.1;Name=WP_003901422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217061.1;locus_tag=AL60_RS20820;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003901422.1;transl_table=11 NZ_KK316855.1 RefSeq gene 38893 39306 . + . ID=gene-AL60_RS20825;Name=AL60_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20825;old_locus_tag=AL60_03119 NZ_KK316855.1 Protein Homology CDS 38893 39306 . + 0 ID=cds-WP_003413164.1;Parent=gene-AL60_RS20825;Dbxref=GenBank:WP_003413164.1;Name=WP_003413164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217062.1;locus_tag=AL60_RS20825;product=PIN domain nuclease;protein_id=WP_003413164.1;transl_table=11 NZ_KK316855.1 RefSeq gene 39345 39602 . + . ID=gene-AL60_RS20830;Name=AL60_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20830;old_locus_tag=AL60_03120 NZ_KK316855.1 Protein Homology CDS 39345 39602 . + 0 ID=cds-WP_003413167.1;Parent=gene-AL60_RS20830;Dbxref=GenBank:WP_003413167.1;Name=WP_003413167.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217063.1;locus_tag=AL60_RS20830;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003413167.1;transl_table=11 NZ_KK316855.1 RefSeq gene 39599 39976 . + . ID=gene-AL60_RS20835;Name=AL60_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20835;old_locus_tag=AL60_03121 NZ_KK316855.1 Protein Homology CDS 39599 39976 . + 0 ID=cds-WP_003413174.1;Parent=gene-AL60_RS20835;Dbxref=GenBank:WP_003413174.1;Name=WP_003413174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217064.1;locus_tag=AL60_RS20835;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003413174.1;transl_table=11 NZ_KK316855.1 RefSeq gene 39992 40366 . - . ID=gene-AL60_RS20840;Name=AL60_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20840;old_locus_tag=AL60_03122 NZ_KK316855.1 Protein Homology CDS 39992 40366 . - 0 ID=cds-WP_003413177.1;Parent=gene-AL60_RS20840;Dbxref=GenBank:WP_003413177.1;Name=WP_003413177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837057.1;locus_tag=AL60_RS20840;product=hypothetical protein;protein_id=WP_003413177.1;transl_table=11 NZ_KK316855.1 RefSeq gene 40466 40861 . - . ID=gene-AL60_RS20845;Name=vapC20;gbkey=Gene;gene=vapC20;gene_biotype=protein_coding;locus_tag=AL60_RS20845;old_locus_tag=AL60_03123 NZ_KK316855.1 Protein Homology CDS 40466 40861 . - 0 ID=cds-WP_003413180.1;Parent=gene-AL60_RS20845;Dbxref=GenBank:WP_003413180.1;Name=WP_003413180.1;gbkey=CDS;gene=vapC20;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217065.1;locus_tag=AL60_RS20845;product=type II toxin-antitoxin system toxin 23S rRNA-specific endonuclease VapC20;protein_id=WP_003413180.1;transl_table=11 NZ_KK316855.1 RefSeq gene 40858 41103 . - . ID=gene-AL60_RS20850;Name=vapB20;gbkey=Gene;gene=vapB20;gene_biotype=protein_coding;locus_tag=AL60_RS20850;old_locus_tag=AL60_03124 NZ_KK316855.1 Protein Homology CDS 40858 41103 . - 0 ID=cds-WP_003413183.1;Parent=gene-AL60_RS20850;Dbxref=GenBank:WP_003413183.1;Name=WP_003413183.1;gbkey=CDS;gene=vapB20;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217066.1;locus_tag=AL60_RS20850;product=type II toxin-antitoxin system antitoxin VapB20;protein_id=WP_003413183.1;transl_table=11 NZ_KK316855.1 RefSeq gene 41514 41933 . - . ID=gene-AL60_RS20855;Name=AL60_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20855;old_locus_tag=AL60_03125 NZ_KK316855.1 Protein Homology CDS 41514 41933 . - 0 ID=cds-WP_003413190.1;Parent=gene-AL60_RS20855;Dbxref=GenBank:WP_003413190.1;Name=WP_003413190.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217067.1;locus_tag=AL60_RS20855;product=A24 family peptidase;protein_id=WP_003413190.1;transl_table=11 NZ_KK316855.1 RefSeq gene 41945 42754 . - . ID=gene-AL60_RS20860;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=AL60_RS20860;old_locus_tag=AL60_03126 NZ_KK316855.1 Protein Homology CDS 41945 42754 . - 0 ID=cds-WP_003413193.1;Parent=gene-AL60_RS20860;Dbxref=GenBank:WP_003413193.1;Name=WP_003413193.1;Ontology_term=GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217068.1;locus_tag=AL60_RS20860;product=shikimate dehydrogenase;protein_id=WP_003413193.1;transl_table=11 NZ_KK316855.1 RefSeq gene 42751 44004 . - . ID=gene-AL60_RS20865;Name=AL60_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20865;old_locus_tag=AL60_03127 NZ_KK316855.1 Protein Homology CDS 42751 44004 . - 0 ID=cds-WP_003413196.1;Parent=gene-AL60_RS20865;Dbxref=GenBank:WP_003413196.1;Name=WP_003413196.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932,GO:0016829;gbkey=CDS;go_function=lytic endotransglycosylase activity|0008932||IEA,lyase activity|0016829||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217069.1;locus_tag=AL60_RS20865;product=endolytic transglycosylase MltG;protein_id=WP_003413196.1;transl_table=11 NZ_KK316855.1 RefSeq gene 43997 44509 . - . ID=gene-AL60_RS20870;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=AL60_RS20870;old_locus_tag=AL60_03128 NZ_KK316855.1 Protein Homology CDS 43997 44509 . - 0 ID=cds-WP_003413197.1;Parent=gene-AL60_RS20870;Dbxref=GenBank:WP_003413197.1;Name=WP_003413197.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217070.1;locus_tag=AL60_RS20870;product=Holliday junction resolvase RuvX;protein_id=WP_003413197.1;transl_table=11 NZ_KK316855.1 RefSeq gene 44510 47224 . - . ID=gene-AL60_RS20875;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AL60_RS20875;old_locus_tag=AL60_03129 NZ_KK316855.1 Protein Homology CDS 44510 47224 . - 0 ID=cds-WP_003902305.1;Parent=gene-AL60_RS20875;Dbxref=GenBank:WP_003902305.1;Name=WP_003902305.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217071.1;locus_tag=AL60_RS20875;product=alanine--tRNA ligase;protein_id=WP_003902305.1;transl_table=11 NZ_KK316855.1 RefSeq gene 47315 47704 . - . ID=gene-AL60_RS20880;Name=AL60_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20880;old_locus_tag=AL60_03130 NZ_KK316855.1 Protein Homology CDS 47315 47704 . - 0 ID=cds-WP_003413208.1;Parent=gene-AL60_RS20880;Dbxref=GenBank:WP_003413208.1;Name=WP_003413208.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217072.1;locus_tag=AL60_RS20880;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_003413208.1;transl_table=11 NZ_KK316855.1 RefSeq gene 47865 48485 . + . ID=gene-AL60_RS20885;Name=AL60_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20885;old_locus_tag=AL60_03131 NZ_KK316855.1 Protein Homology CDS 47865 48485 . + 0 ID=cds-WP_003918465.1;Parent=gene-AL60_RS20885;Dbxref=GenBank:WP_003918465.1;Name=WP_003918465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355845.1;locus_tag=AL60_RS20885;product=antibiotic biosynthesis monooxygenase;protein_id=WP_003918465.1;transl_table=11 NZ_KK316855.1 RefSeq gene 48657 49280 . + . ID=gene-AL60_RS20890;Name=AL60_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20890;old_locus_tag=AL60_03132 NZ_KK316855.1 Protein Homology CDS 48657 49280 . + 0 ID=cds-WP_003917020.1;Parent=gene-AL60_RS20890;Dbxref=GenBank:WP_003917020.1;Name=WP_003917020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355845.1;locus_tag=AL60_RS20890;product=hypothetical protein;protein_id=WP_003917020.1;transl_table=11 NZ_KK316855.1 RefSeq gene 49310 50668 . - . ID=gene-AL60_RS20895;Name=AL60_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20895;old_locus_tag=AL60_03133 NZ_KK316855.1 Protein Homology CDS 49310 50668 . - 0 ID=cds-WP_003899376.1;Parent=gene-AL60_RS20895;Dbxref=GenBank:WP_003899376.1;Name=WP_003899376.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217075.1;locus_tag=AL60_RS20895;product=replication-associated recombination protein A;protein_id=WP_003899376.1;transl_table=11 NZ_KK316855.1 RefSeq gene 50814 51791 . + . ID=gene-AL60_RS20900;Name=AL60_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20900;old_locus_tag=AL60_03134 NZ_KK316855.1 Protein Homology CDS 50814 51791 . + 0 ID=cds-WP_003899377.1;Parent=gene-AL60_RS20900;Dbxref=GenBank:WP_003899377.1;Name=WP_003899377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217076.1;locus_tag=AL60_RS20900;product=DUF2189 domain-containing protein;protein_id=WP_003899377.1;transl_table=11 NZ_KK316855.1 RefSeq gene 52148 52885 . + . ID=gene-AL60_RS0105245;Name=AL60_RS0105245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105245 NZ_KK316855.1 Protein Homology CDS 52148 52885 . + 0 ID=cds-WP_003906854.1;Parent=gene-AL60_RS0105245;Dbxref=GenBank:WP_003906854.1;Name=WP_003906854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950737.1;locus_tag=AL60_RS0105245;product=DUF2652 domain-containing protein;protein_id=WP_003906854.1;transl_table=11 NZ_KK316855.1 RefSeq gene 53028 54077 . + . ID=gene-AL60_RS20905;Name=AL60_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20905;old_locus_tag=AL60_03137 NZ_KK316855.1 Protein Homology CDS 53028 54077 . + 0 ID=cds-WP_003413230.1;Parent=gene-AL60_RS20905;Dbxref=GenBank:WP_003413230.1;Name=WP_003413230.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217079.1;locus_tag=AL60_RS20905;product=ABC transporter permease;protein_id=WP_003413230.1;transl_table=11 NZ_KK316855.1 RefSeq gene 54080 55072 . + . ID=gene-AL60_RS20910;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=AL60_RS20910;old_locus_tag=AL60_03138 NZ_KK316855.1 Protein Homology CDS 54080 55072 . + 0 ID=cds-WP_003899378.1;Parent=gene-AL60_RS20910;Dbxref=GenBank:WP_003899378.1;Name=WP_003899378.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;gene=glnQ;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217080.1;locus_tag=AL60_RS20910;product=ABC transporter ATP-binding protein;protein_id=WP_003899378.1;transl_table=11 NZ_KK316855.1 RefSeq gene 55349 57100 . + . ID=gene-AL60_RS20915;Name=AL60_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20915;old_locus_tag=AL60_03139 NZ_KK316855.1 Protein Homology CDS 55349 57100 . + 0 ID=cds-WP_003901427.1;Parent=gene-AL60_RS20915;Dbxref=GenBank:WP_003901427.1;Name=WP_003901427.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217081.1;locus_tag=AL60_RS20915;product=patatin-like phospholipase family protein;protein_id=WP_003901427.1;transl_table=11 NZ_KK316855.1 RefSeq gene 57192 60533 . + . ID=gene-AL60_RS20920;Name=AL60_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20920;old_locus_tag=AL60_03140 NZ_KK316855.1 Protein Homology CDS 57192 60533 . + 0 ID=cds-WP_003913357.1;Parent=gene-AL60_RS20920;Dbxref=GenBank:WP_003913357.1;Name=WP_003913357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293785.1;locus_tag=AL60_RS20920;product=transglutaminase family protein;protein_id=WP_003913357.1;transl_table=11 NZ_KK316855.1 RefSeq gene 60533 63187 . + . ID=gene-AL60_RS20925;Name=AL60_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20925;old_locus_tag=AL60_03141 NZ_KK316855.1 Protein Homology CDS 60533 63187 . + 0 ID=cds-WP_003413330.1;Parent=gene-AL60_RS20925;Dbxref=GenBank:WP_003413330.1;Name=WP_003413330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217083.1;locus_tag=AL60_RS20925;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_003413330.1;transl_table=11 NZ_KK316855.1 RefSeq gene 63184 64209 . - . ID=gene-AL60_RS20930;Name=AL60_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20930;old_locus_tag=AL60_03142 NZ_KK316855.1 Protein Homology CDS 63184 64209 . - 0 ID=cds-WP_003413332.1;Parent=gene-AL60_RS20930;Dbxref=GenBank:WP_003413332.1;Name=WP_003413332.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217084.1;locus_tag=AL60_RS20930;product=zinc-binding metallopeptidase family protein;protein_id=WP_003413332.1;transl_table=11 NZ_KK316855.1 RefSeq gene 64202 65146 . - . ID=gene-AL60_RS20935;Name=AL60_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20935;old_locus_tag=AL60_03143 NZ_KK316855.1 Protein Homology CDS 64202 65146 . - 0 ID=cds-WP_003413334.1;Parent=gene-AL60_RS20935;Dbxref=GenBank:WP_003413334.1;Name=WP_003413334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217085.1;locus_tag=AL60_RS20935;product=transglutaminase family protein;protein_id=WP_003413334.1;transl_table=11 NZ_KK316855.1 RefSeq gene 65250 65639 . + . ID=gene-AL60_RS20940;Name=AL60_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20940;old_locus_tag=AL60_03144 NZ_KK316855.1 Protein Homology CDS 65250 65639 . + 0 ID=cds-WP_003413336.1;Parent=gene-AL60_RS20940;Dbxref=GenBank:WP_003413336.1;Name=WP_003413336.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217086.1;locus_tag=AL60_RS20940;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_003413336.1;transl_table=11 NZ_KK316855.1 RefSeq gene 65631 66698 . - . ID=gene-AL60_RS20945;Name=AL60_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20945;old_locus_tag=AL60_03145 NZ_KK316855.1 Protein Homology CDS 65631 66698 . - 0 ID=cds-WP_003899381.1;Parent=gene-AL60_RS20945;Dbxref=GenBank:WP_003899381.1;Name=WP_003899381.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217087.1;locus_tag=AL60_RS20945;product=FUSC family protein;protein_id=WP_003899381.1;transl_table=11 NZ_KK316855.1 RefSeq gene 66751 68541 . - . ID=gene-AL60_RS20950;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AL60_RS20950;old_locus_tag=AL60_03146 NZ_KK316855.1 Protein Homology CDS 66751 68541 . - 0 ID=cds-WP_003899382.1;Parent=gene-AL60_RS20950;Dbxref=GenBank:WP_003899382.1;Name=WP_003899382.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217088.1;locus_tag=AL60_RS20950;product=aspartate--tRNA ligase;protein_id=WP_003899382.1;transl_table=11 NZ_KK316855.1 RefSeq gene 68634 69521 . + . ID=gene-AL60_RS20955;Name=AL60_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20955;old_locus_tag=AL60_03147 NZ_KK316855.1 Protein Homology CDS 68634 69521 . + 0 ID=cds-WP_015385292.1;Parent=gene-AL60_RS20955;Dbxref=GenBank:WP_015385292.1;Name=WP_015385292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385292.1;locus_tag=AL60_RS20955;product=oxidoreductase;protein_id=WP_015385292.1;transl_table=11 NZ_KK316855.1 RefSeq gene 69544 70047 . + . ID=gene-AL60_RS20960;Name=AL60_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20960;old_locus_tag=AL60_03148 NZ_KK316855.1 Protein Homology CDS 69544 70047 . + 0 ID=cds-WP_003413345.1;Parent=gene-AL60_RS20960;Dbxref=GenBank:WP_003413345.1;Name=WP_003413345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217090.1;locus_tag=AL60_RS20960;product=SRPBCC family protein;protein_id=WP_003413345.1;transl_table=11 NZ_KK316855.1 RefSeq gene 70077 70958 . + . ID=gene-AL60_RS20965;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=AL60_RS20965;old_locus_tag=AL60_03149 NZ_KK316855.1 Protein Homology CDS 70077 70958 . + 0 ID=cds-WP_003899384.1;Parent=gene-AL60_RS20965;Dbxref=GenBank:WP_003899384.1;Name=WP_003899384.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217091.1;locus_tag=AL60_RS20965;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_003899384.1;transl_table=11 NZ_KK316855.1 RefSeq gene 70964 71428 . - . ID=gene-AL60_RS20970;Name=AL60_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20970;old_locus_tag=AL60_03150 NZ_KK316855.1 Protein Homology CDS 70964 71428 . - 0 ID=cds-WP_003413352.1;Parent=gene-AL60_RS20970;Dbxref=GenBank:WP_003413352.1;Name=WP_003413352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217092.1;locus_tag=AL60_RS20970;product=membrane protein;protein_id=WP_003413352.1;transl_table=11 NZ_KK316855.1 RefSeq gene 71656 73245 . + . ID=gene-AL60_RS20975;Name=AL60_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20975;old_locus_tag=AL60_03151 NZ_KK316855.1 Protein Homology CDS 71656 73245 . + 0 ID=cds-WP_003413355.1;Parent=gene-AL60_RS20975;Dbxref=GenBank:WP_003413355.1;Name=WP_003413355.1;Ontology_term=GO:0016311,GO:0003993,GO:0046872;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217093.1;locus_tag=AL60_RS20975;product=purple acid phosphatase family protein;protein_id=WP_003413355.1;transl_table=11 NZ_KK316855.1 RefSeq gene 73247 74269 . - . ID=gene-AL60_RS20980;Name=AL60_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20980;old_locus_tag=AL60_03152 NZ_KK316855.1 Protein Homology CDS 73247 74269 . - 0 ID=cds-WP_003413359.1;Parent=gene-AL60_RS20980;Dbxref=GenBank:WP_003413359.1;Name=WP_003413359.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217094.1;locus_tag=AL60_RS20980;product=Rv2578c family radical SAM protein;protein_id=WP_003413359.1;transl_table=11 NZ_KK316855.1 RefSeq gene 74377 75279 . + . ID=gene-AL60_RS20985;Name=dhaA;gbkey=Gene;gene=dhaA;gene_biotype=protein_coding;locus_tag=AL60_RS20985;old_locus_tag=AL60_03153 NZ_KK316855.1 Protein Homology CDS 74377 75279 . + 0 ID=cds-WP_003413363.1;Parent=gene-AL60_RS20985;Dbxref=GenBank:WP_003413363.1;Name=WP_003413363.1;Ontology_term=GO:0018786;gbkey=CDS;gene=dhaA;go_function=haloalkane dehalogenase activity|0018786||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177890.1;locus_tag=AL60_RS20985;product=haloalkane dehalogenase;protein_id=WP_003413363.1;transl_table=11 NZ_KK316855.1 RefSeq gene 75559 76830 . - . ID=gene-AL60_RS20990;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AL60_RS20990;old_locus_tag=AL60_03154 NZ_KK316855.1 Protein Homology CDS 75559 76830 . - 0 ID=cds-WP_003413365.1;Parent=gene-AL60_RS20990;Dbxref=GenBank:WP_003413365.1;Name=WP_003413365.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217096.1;locus_tag=AL60_RS20990;product=histidine--tRNA ligase;protein_id=WP_003413365.1;transl_table=11 NZ_KK316855.1 RefSeq gene 76827 77501 . - . ID=gene-AL60_RS20995;Name=AL60_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS20995;old_locus_tag=AL60_03155 NZ_KK316855.1 Protein Homology CDS 76827 77501 . - 0 ID=cds-WP_003413366.1;Parent=gene-AL60_RS20995;Dbxref=GenBank:WP_003413366.1;Name=WP_003413366.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217097.1;locus_tag=AL60_RS20995;product=MBL fold metallo-hydrolase;protein_id=WP_003413366.1;transl_table=11 NZ_KK316855.1 RefSeq gene 77600 78478 . + . ID=gene-AL60_RS21000;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=AL60_RS21000;old_locus_tag=AL60_03156 NZ_KK316855.1 Protein Homology CDS 77600 78478 . + 0 ID=cds-WP_003917032.1;Parent=gene-AL60_RS21000;Dbxref=GenBank:WP_003917032.1;Name=WP_003917032.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917032.1;locus_tag=AL60_RS21000;product=peptidylprolyl isomerase PpiB;protein_id=WP_003917032.1;transl_table=11 NZ_KK316855.1 RefSeq gene 78564 80936 . - . ID=gene-AL60_RS21005;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AL60_RS21005;old_locus_tag=AL60_03157 NZ_KK316855.1 Protein Homology CDS 78564 80936 . - 0 ID=cds-WP_003413368.1;Parent=gene-AL60_RS21005;Dbxref=GenBank:WP_003413368.1;Name=WP_003413368.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;gene=relA;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217099.1;locus_tag=AL60_RS21005;product=RelA/SpoT family protein;protein_id=WP_003413368.1;transl_table=11 NZ_KK316855.1 RefSeq gene 80967 81638 . - . ID=gene-AL60_RS0105250;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=AL60_RS0105250;old_locus_tag=AL60_03158 NZ_KK316855.1 Protein Homology CDS 80967 81638 . - 0 ID=cds-WP_003413369.1;Parent=gene-AL60_RS0105250;Dbxref=GenBank:WP_003413369.1;Name=WP_003413369.1;Ontology_term=GO:0009116,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217100.1;locus_tag=AL60_RS0105250;product=adenine phosphoribosyltransferase;protein_id=WP_003413369.1;transl_table=11 NZ_KK316855.1 RefSeq gene 81742 83415 . - . ID=gene-AL60_RS21010;Name=AL60_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21010;old_locus_tag=AL60_03159 NZ_KK316855.1 Protein Homology CDS 81742 83415 . - 0 ID=cds-WP_003413373.1;Parent=gene-AL60_RS21010;Dbxref=GenBank:WP_003413373.1;Name=WP_003413373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217101.1;locus_tag=AL60_RS21010;product=ABC transporter substrate-binding protein;protein_id=WP_003413373.1;transl_table=11 NZ_KK316855.1 RefSeq gene 83421 84749 . - . ID=gene-AL60_RS21015;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=AL60_RS21015;old_locus_tag=AL60_03160 NZ_KK316855.1 Protein Homology CDS 83421 84749 . - 0 ID=cds-WP_003899387.1;Parent=gene-AL60_RS21015;Dbxref=GenBank:WP_003899387.1;Name=WP_003899387.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217102.1;locus_tag=AL60_RS21015;product=protein translocase subunit SecF;protein_id=WP_003899387.1;transl_table=11 NZ_KK316855.1 RefSeq gene 84753 86474 . - . ID=gene-AL60_RS21020;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AL60_RS21020;old_locus_tag=AL60_03161 NZ_KK316855.1 Protein Homology CDS 84753 86474 . - 0 ID=cds-WP_003413385.1;Parent=gene-AL60_RS21020;Dbxref=GenBank:WP_003413385.1;Name=WP_003413385.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217103.1;locus_tag=AL60_RS21020;product=protein translocase subunit SecD;protein_id=WP_003413385.1;transl_table=11 NZ_KK316855.1 RefSeq gene 86584 86931 . - . ID=gene-AL60_RS21025;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AL60_RS21025;old_locus_tag=AL60_03162 NZ_KK316855.1 Protein Homology CDS 86584 86931 . - 0 ID=cds-WP_003413391.1;Parent=gene-AL60_RS21025;Dbxref=GenBank:WP_003413391.1;Name=WP_003413391.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217104.1;locus_tag=AL60_RS21025;product=preprotein translocase subunit YajC;protein_id=WP_003413391.1;transl_table=11 NZ_KK316855.1 RefSeq gene 87098 88447 . + . ID=gene-AL60_RS21030;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=AL60_RS21030;old_locus_tag=AL60_03163 NZ_KK316855.1 Protein Homology CDS 87098 88447 . + 0 ID=cds-WP_003413395.1;Parent=gene-AL60_RS21030;Dbxref=GenBank:WP_003413395.1;Name=WP_003413395.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217105.1;locus_tag=AL60_RS21030;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_003413395.1;transl_table=11 NZ_KK316855.1 RefSeq gene 88609 92115 . + . ID=gene-AL60_RS21035;Name=car;gbkey=Gene;gene=car;gene_biotype=protein_coding;locus_tag=AL60_RS21035;old_locus_tag=AL60_03164 NZ_KK316855.1 Protein Homology CDS 88609 92115 . + 0 ID=cds-WP_003413409.1;Parent=gene-AL60_RS21035;Dbxref=GenBank:WP_003413409.1;Name=WP_003413409.1;Ontology_term=GO:0006629,GO:0005524,GO:0016620,GO:0031177,GO:0050661;gbkey=CDS;gene=car;go_function=ATP binding|0005524||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,phosphopantetheine binding|0031177||IEA,NADP binding|0050661||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217106.1;locus_tag=AL60_RS21035;product=carboxylic acid reductase;protein_id=WP_003413409.1;transl_table=11 NZ_KK316855.1 RefSeq gene 92289 93920 . + . ID=gene-AL60_RS21040;Name=AL60_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21040;old_locus_tag=AL60_03165 NZ_KK316855.1 Protein Homology CDS 92289 93920 . + 0 ID=cds-WP_010886152.1;Parent=gene-AL60_RS21040;Dbxref=GenBank:WP_010886152.1;Name=WP_010886152.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177891.1;locus_tag=AL60_RS21040;product=PE family protein;protein_id=WP_010886152.1;transl_table=11 NZ_KK316855.1 RefSeq gene 93937 94971 . - . ID=gene-AL60_RS21045;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AL60_RS21045;old_locus_tag=AL60_03166 NZ_KK316855.1 Protein Homology CDS 93937 94971 . - 0 ID=cds-WP_003413416.1;Parent=gene-AL60_RS21045;Dbxref=GenBank:WP_003413416.1;Name=WP_003413416.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217108.1;locus_tag=AL60_RS21045;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_003413416.1;transl_table=11 NZ_KK316855.1 RefSeq gene 94968 95558 . - . ID=gene-AL60_RS21050;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AL60_RS21050;old_locus_tag=AL60_03167 NZ_KK316855.1 Protein Homology CDS 94968 95558 . - 0 ID=cds-WP_003413421.1;Parent=gene-AL60_RS21050;Dbxref=GenBank:WP_003413421.1;Name=WP_003413421.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217109.1;locus_tag=AL60_RS21050;product=Holliday junction branch migration protein RuvA;protein_id=WP_003413421.1;transl_table=11 NZ_KK316855.1 RefSeq gene 95555 96121 . - . ID=gene-AL60_RS21055;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AL60_RS21055;old_locus_tag=AL60_03168 NZ_KK316855.1 Protein Homology CDS 95555 96121 . - 0 ID=cds-WP_003413426.1;Parent=gene-AL60_RS21055;Dbxref=GenBank:WP_003413426.1;Name=WP_003413426.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217110.1;locus_tag=AL60_RS21055;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_003413426.1;transl_table=11 NZ_KK316855.1 RefSeq gene 96230 96475 . + . ID=gene-AL60_RS21060;Name=AL60_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21060;old_locus_tag=AL60_03169 NZ_KK316855.1 Protein Homology CDS 96230 96475 . + 0 ID=cds-WP_003413429.1;Parent=gene-AL60_RS21060;Dbxref=GenBank:WP_003413429.1;Name=WP_003413429.1;Ontology_term=GO:0001558,GO:0003677,GO:0003700,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of cell growth|0001558||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217111.1;locus_tag=AL60_RS21060;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_003413429.1;transl_table=11 NZ_KK316855.1 RefSeq gene 96472 96876 . + . ID=gene-AL60_RS21065;Name=AL60_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21065;old_locus_tag=AL60_03170 NZ_KK316855.1 Protein Homology CDS 96472 96876 . + 0 ID=cds-WP_003899389.1;Parent=gene-AL60_RS21065;Dbxref=GenBank:WP_003899389.1;Name=WP_003899389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217112.1;locus_tag=AL60_RS21065;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003899389.1;transl_table=11 NZ_KK316855.1 RefSeq gene 97093 97713 . + . ID=gene-AL60_RS21070;Name=AL60_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21070;old_locus_tag=AL60_03171 NZ_KK316855.1 Protein Homology CDS 97093 97713 . + 0 ID=cds-WP_003413441.1;Parent=gene-AL60_RS21070;Dbxref=GenBank:WP_003413441.1;Name=WP_003413441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217113.1;locus_tag=AL60_RS21070;product=DUF4178 domain-containing protein;protein_id=WP_003413441.1;transl_table=11 NZ_KK316855.1 RefSeq gene 97724 98218 . + . ID=gene-AL60_RS21075;Name=AL60_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21075;old_locus_tag=AL60_03172 NZ_KK316855.1 Protein Homology CDS 97724 98218 . + 0 ID=cds-WP_003413444.1;Parent=gene-AL60_RS21075;Dbxref=GenBank:WP_003413444.1;Name=WP_003413444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217114.1;locus_tag=AL60_RS21075;product=DUF2617 family protein;protein_id=WP_003413444.1;transl_table=11 NZ_KK316855.1 RefSeq gene 98215 98646 . + . ID=gene-AL60_RS21080;Name=AL60_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21080;old_locus_tag=AL60_03173 NZ_KK316855.1 Protein Homology CDS 98215 98646 . + 0 ID=cds-WP_003899390.1;Parent=gene-AL60_RS21080;Dbxref=GenBank:WP_003899390.1;Name=WP_003899390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217115.1;locus_tag=AL60_RS21080;product=DUF4247 domain-containing protein;protein_id=WP_003899390.1;transl_table=11 NZ_KK316855.1 RefSeq gene 98671 99129 . + . ID=gene-AL60_RS21085;Name=AL60_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21085;old_locus_tag=AL60_03174 NZ_KK316855.1 Protein Homology CDS 98671 99129 . + 0 ID=cds-WP_003413451.1;Parent=gene-AL60_RS21085;Dbxref=GenBank:WP_003413451.1;Name=WP_003413451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003413451.1;locus_tag=AL60_RS21085;product=DUF350 domain-containing protein;protein_id=WP_003413451.1;transl_table=11 NZ_KK316855.1 RefSeq gene 99126 100697 . + . ID=gene-AL60_RS21090;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=AL60_RS21090;old_locus_tag=AL60_03175 NZ_KK316855.1 Protein Homology CDS 99126 100697 . + 0 ID=cds-WP_003899392.1;Parent=gene-AL60_RS21090;Dbxref=GenBank:WP_003899392.1;Name=WP_003899392.1;Ontology_term=GO:0003824;gbkey=CDS;gene=speE;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177892.1;locus_tag=AL60_RS21090;product=polyamine aminopropyltransferase;protein_id=WP_003899392.1;transl_table=11 NZ_KK316855.1 RefSeq gene 100808 101095 . + . ID=gene-AL60_RS21095;Name=AL60_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21095;old_locus_tag=AL60_03176 NZ_KK316855.1 Protein Homology CDS 100808 101095 . + 0 ID=cds-WP_003413456.1;Parent=gene-AL60_RS21095;Dbxref=GenBank:WP_003413456.1;Name=WP_003413456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177673.1;locus_tag=AL60_RS21095;product=antitoxin VapB41;protein_id=WP_003413456.1;transl_table=11 NZ_KK316855.1 RefSeq gene 101082 101522 . + . ID=gene-AL60_RS21100;Name=AL60_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21100;old_locus_tag=AL60_03177 NZ_KK316855.1 Protein Homology CDS 101082 101522 . + 0 ID=cds-WP_003413460.1;Parent=gene-AL60_RS21100;Dbxref=GenBank:WP_003413460.1;Name=WP_003413460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217118.1;locus_tag=AL60_RS21100;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003413460.1;transl_table=11 NZ_KK316855.1 RefSeq gene 101543 102298 . - . ID=gene-AL60_RS21105;Name=AL60_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21105;old_locus_tag=AL60_03178 NZ_KK316855.1 Protein Homology CDS 101543 102298 . - 0 ID=cds-WP_003413464.1;Parent=gene-AL60_RS21105;Dbxref=GenBank:WP_003413464.1;Name=WP_003413464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217119.1;locus_tag=AL60_RS21105;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_003413464.1;transl_table=11 NZ_KK316855.1 RefSeq gene 102431 103027 . - . ID=gene-AL60_RS21110;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=AL60_RS21110;old_locus_tag=AL60_03179 NZ_KK316855.1 Protein Homology CDS 102431 103027 . - 0 ID=cds-WP_003413465.1;Parent=gene-AL60_RS21110;Dbxref=GenBank:WP_003413465.1;Name=WP_003413465.1;Ontology_term=GO:0042823,GO:0004359,GO:0016884;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217120.1;locus_tag=AL60_RS21110;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_003413465.1;transl_table=11 NZ_KK316855.1 RefSeq gene 103035 103880 . - . ID=gene-AL60_RS21115;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AL60_RS21115;old_locus_tag=AL60_03180 NZ_KK316855.1 Protein Homology CDS 103035 103880 . - 0 ID=cds-WP_003413466.1;Parent=gene-AL60_RS21115;Dbxref=GenBank:WP_003413466.1;Name=WP_003413466.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217121.1;locus_tag=AL60_RS21115;product=acyl-CoA thioesterase II;protein_id=WP_003413466.1;transl_table=11 NZ_KK316855.1 RefSeq gene 103909 104808 . - . ID=gene-AL60_RS21120;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=AL60_RS21120;old_locus_tag=AL60_03181 NZ_KK316855.1 Protein Homology CDS 103909 104808 . - 0 ID=cds-WP_003413468.1;Parent=gene-AL60_RS21120;Dbxref=GenBank:WP_003413468.1;Name=WP_003413468.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217122.1;locus_tag=AL60_RS21120;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_003413468.1;transl_table=11 NZ_KK316855.1 RefSeq gene 104936 105610 . + . ID=gene-AL60_RS21125;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=AL60_RS21125;old_locus_tag=AL60_03182 NZ_KK316855.1 Protein Homology CDS 104936 105610 . + 0 ID=cds-WP_003413471.1;Parent=gene-AL60_RS21125;Dbxref=GenBank:WP_003413471.1;Name=WP_003413471.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217123.1;locus_tag=AL60_RS21125;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_003413471.1;transl_table=11 NZ_KK316855.1 RefSeq gene 105784 107526 . + . ID=gene-AL60_RS21130;Name=AL60_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21130;old_locus_tag=AL60_03183 NZ_KK316855.1 Protein Homology CDS 105784 107526 . + 0 ID=cds-WP_003899395.1;Parent=gene-AL60_RS21130;Dbxref=GenBank:WP_003899395.1;Name=WP_003899395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177893.1;locus_tag=AL60_RS21130;product=PE-PPE domain-containing protein;protein_id=WP_003899395.1;transl_table=11 NZ_KK316855.1 RefSeq gene 107548 108603 . - . ID=gene-AL60_RS21135;Name=AL60_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21135;old_locus_tag=AL60_03184 NZ_KK316855.1 Protein Homology CDS 107548 108603 . - 0 ID=cds-WP_003413475.1;Parent=gene-AL60_RS21135;Dbxref=GenBank:WP_003413475.1;Name=WP_003413475.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217125.1;locus_tag=AL60_RS21135;product=NUDIX hydrolase;protein_id=WP_003413475.1;transl_table=11 NZ_KK316855.1 RefSeq gene 108603 109739 . - . ID=gene-AL60_RS21140;Name=pimA;gbkey=Gene;gene=pimA;gene_biotype=protein_coding;locus_tag=AL60_RS21140;old_locus_tag=AL60_03185 NZ_KK316855.1 Protein Homology CDS 108603 109739 . - 0 ID=cds-WP_003413478.1;Parent=gene-AL60_RS21140;Dbxref=GenBank:WP_003413478.1;Name=WP_003413478.1;gbkey=CDS;gene=pimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217126.1;locus_tag=AL60_RS21140;product=phosphatidyl-myo-inositol alpha-mannosyltransferase;protein_id=WP_003413478.1;transl_table=11 NZ_KK316855.1 RefSeq gene 109750 110700 . - . ID=gene-AL60_RS21145;Name=AL60_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21145;old_locus_tag=AL60_03186 NZ_KK316855.1 Protein Homology CDS 109750 110700 . - 0 ID=cds-WP_003900533.1;Parent=gene-AL60_RS21145;Dbxref=GenBank:WP_003900533.1;Name=WP_003900533.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217127.1;locus_tag=AL60_RS21145;product=phosphatidylinositol mannoside acyltransferase;protein_id=WP_003900533.1;transl_table=11 NZ_KK316855.1 RefSeq gene 110697 111350 . - . ID=gene-AL60_RS21150;Name=pgsA1;gbkey=Gene;gene=pgsA1;gene_biotype=protein_coding;locus_tag=AL60_RS21150;old_locus_tag=AL60_03187 NZ_KK316855.1 Protein Homology CDS 110697 111350 . - 0 ID=cds-WP_003413482.1;Parent=gene-AL60_RS21150;Dbxref=GenBank:WP_003413482.1;Name=WP_003413482.1;gbkey=CDS;gene=pgsA1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177894.1;locus_tag=AL60_RS21150;product=phosphatidylinositol phosphate synthase;protein_id=WP_003413482.1;transl_table=11 NZ_KK316855.1 RefSeq gene 111347 111934 . - . ID=gene-AL60_RS21155;Name=AL60_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21155;old_locus_tag=AL60_03188 NZ_KK316855.1 Protein Homology CDS 111347 111934 . - 0 ID=cds-WP_003413484.1;Parent=gene-AL60_RS21155;Dbxref=GenBank:WP_003413484.1;Name=WP_003413484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217129.1;locus_tag=AL60_RS21155;product=ATP adenylyltransferase;protein_id=WP_003413484.1;transl_table=11 NZ_KK316855.1 RefSeq gene 111927 114005 . - . ID=gene-AL60_RS21160;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AL60_RS21160;old_locus_tag=AL60_03189 NZ_KK316855.1 Protein Homology CDS 111927 114005 . - 0 ID=cds-WP_003413486.1;Parent=gene-AL60_RS21160;Dbxref=GenBank:WP_003413486.1;Name=WP_003413486.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217130.1;locus_tag=AL60_RS21160;product=threonine--tRNA ligase;protein_id=WP_003413486.1;transl_table=11 NZ_KK316855.1 RefSeq gene 114114 114341 . + . ID=gene-AL60_RS21165;Name=AL60_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21165;old_locus_tag=AL60_03190 NZ_KK316855.1 Protein Homology CDS 114114 114341 . + 0 ID=cds-WP_003413487.1;Parent=gene-AL60_RS21165;Dbxref=GenBank:WP_003413487.1;Name=WP_003413487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177674.1;locus_tag=AL60_RS21165;product=hypothetical protein;protein_id=WP_003413487.1;transl_table=11 NZ_KK316855.1 RefSeq gene 114338 115723 . - . ID=gene-AL60_RS21170;Name=AL60_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21170;old_locus_tag=AL60_03191 NZ_KK316855.1 Protein Homology CDS 114338 115723 . - 0 ID=cds-WP_009938541.1;Parent=gene-AL60_RS21170;Dbxref=GenBank:WP_009938541.1;Name=WP_009938541.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177895.1;locus_tag=AL60_RS21170;product=PE family protein;protein_id=WP_009938541.1;transl_table=11 NZ_KK316855.1 RefSeq gene 116068 116568 . + . ID=gene-AL60_RS21175;Name=AL60_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21175;old_locus_tag=AL60_03192 NZ_KK316855.1 Protein Homology CDS 116068 116568 . + 0 ID=cds-WP_003413569.1;Parent=gene-AL60_RS21175;Dbxref=GenBank:WP_003413569.1;Name=WP_003413569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217132.1;locus_tag=AL60_RS21175;product=DUF1990 domain-containing protein;protein_id=WP_003413569.1;transl_table=11 NZ_KK316855.1 RefSeq gene 116585 117025 . - . ID=gene-AL60_RS21180;Name=AL60_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21180;old_locus_tag=AL60_03193 NZ_KK316855.1 Protein Homology CDS 116585 117025 . - 0 ID=cds-WP_003413574.1;Parent=gene-AL60_RS21180;Dbxref=GenBank:WP_003413574.1;Name=WP_003413574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217133.1;locus_tag=AL60_RS21180;product=Rv2617c family stress response/phage resistance protein;protein_id=WP_003413574.1;transl_table=11 NZ_KK316855.1 RefSeq gene 117121 117849 . + . ID=gene-AL60_RS21185;Name=AL60_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21185;old_locus_tag=AL60_03194 NZ_KK316855.1 Protein Homology CDS 117121 117849 . + 0 ID=cds-WP_003902320.1;Parent=gene-AL60_RS21185;Dbxref=GenBank:WP_003902320.1;Name=WP_003902320.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902320.1;locus_tag=AL60_RS21185;product=helix-turn-helix transcriptional regulator;protein_id=WP_003902320.1;transl_table=11 NZ_KK316855.1 RefSeq gene 117834 118187 . - . ID=gene-AL60_RS21190;Name=AL60_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21190;old_locus_tag=AL60_03195 NZ_KK316855.1 Protein Homology CDS 117834 118187 . - 0 ID=cds-WP_003413583.1;Parent=gene-AL60_RS21190;Dbxref=GenBank:WP_003413583.1;Name=WP_003413583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217135.1;locus_tag=AL60_RS21190;product=cupin domain-containing protein;protein_id=WP_003413583.1;transl_table=11 NZ_KK316855.1 RefSeq gene 118200 118625 . - . ID=gene-AL60_RS21195;Name=AL60_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21195;old_locus_tag=AL60_03196 NZ_KK316855.1 Protein Homology CDS 118200 118625 . - 0 ID=cds-WP_003413586.1;Parent=gene-AL60_RS21195;Dbxref=GenBank:WP_003413586.1;Name=WP_003413586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217136.1;locus_tag=AL60_RS21195;product=hypothetical protein;protein_id=WP_003413586.1;transl_table=11 NZ_KK316855.1 RefSeq gene 118622 119296 . - . ID=gene-AL60_RS21200;Name=AL60_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21200;old_locus_tag=AL60_03197 NZ_KK316855.1 Protein Homology CDS 118622 119296 . - 0 ID=cds-WP_003413588.1;Parent=gene-AL60_RS21200;Dbxref=GenBank:WP_003413588.1;Name=WP_003413588.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217137.1;locus_tag=AL60_RS21200;product=helix-turn-helix transcriptional regulator;protein_id=WP_003413588.1;transl_table=11 NZ_KK316855.1 RefSeq gene 119374 120195 . + . ID=gene-AL60_RS21205;Name=AL60_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21205;old_locus_tag=AL60_03198 NZ_KK316855.1 Protein Homology CDS 119374 120195 . + 0 ID=cds-WP_003413589.1;Parent=gene-AL60_RS21205;Dbxref=GenBank:WP_003413589.1;Name=WP_003413589.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217138.1;locus_tag=AL60_RS21205;product=class I SAM-dependent methyltransferase;protein_id=WP_003413589.1;transl_table=11 NZ_KK316855.1 RefSeq gene 120331 121224 . + . ID=gene-AL60_RS21210;Name=AL60_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21210;old_locus_tag=AL60_03199 NZ_KK316855.1 Protein Homology CDS 120331 121224 . + 0 ID=cds-WP_003413592.1;Parent=gene-AL60_RS21210;Dbxref=GenBank:WP_003413592.1;Name=WP_003413592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217139.1;locus_tag=AL60_RS21210;product=universal stress protein TB31.7;protein_id=WP_003413592.1;transl_table=11 NZ_KK316855.1 RefSeq gene 121227 122021 . - . ID=gene-AL60_RS21215;Name=AL60_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21215;old_locus_tag=AL60_03200 NZ_KK316855.1 Protein Homology CDS 121227 122021 . - 0 ID=cds-WP_003899400.1;Parent=gene-AL60_RS21215;Dbxref=GenBank:WP_003899400.1;Name=WP_003899400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899400.1;locus_tag=AL60_RS21215;product=universal stress protein;protein_id=WP_003899400.1;transl_table=11 NZ_KK316855.1 RefSeq gene 122060 123241 . - . ID=gene-AL60_RS21220;Name=AL60_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21220;old_locus_tag=AL60_03201 NZ_KK316855.1 Protein Homology CDS 122060 123241 . - 0 ID=cds-WP_003899401.1;Parent=gene-AL60_RS21220;Dbxref=GenBank:WP_003899401.1;Name=WP_003899401.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217141.1;locus_tag=AL60_RS21220;product=site-2 protease family protein;protein_id=WP_003899401.1;transl_table=11 NZ_KK316855.1 RefSeq gene 123300 123731 . - . ID=gene-AL60_RS21225;Name=hrp1;gbkey=Gene;gene=hrp1;gene_biotype=protein_coding;locus_tag=AL60_RS21225;old_locus_tag=AL60_03202 NZ_KK316855.1 Protein Homology CDS 123300 123731 . - 0 ID=cds-WP_003413598.1;Parent=gene-AL60_RS21225;Dbxref=GenBank:WP_003413598.1;Name=WP_003413598.1;gbkey=CDS;gene=hrp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217142.1;locus_tag=AL60_RS21225;product=hypoxic response protein Hrp1;protein_id=WP_003413598.1;transl_table=11 NZ_KK316855.1 RefSeq gene 124245 125486 . - . ID=gene-AL60_RS21230;Name=AL60_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21230;old_locus_tag=AL60_03203 NZ_KK316855.1 Protein Homology CDS 124245 125486 . - 0 ID=cds-WP_003899402.1;Parent=gene-AL60_RS21230;Dbxref=GenBank:WP_003899402.1;Name=WP_003899402.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217143.1;locus_tag=AL60_RS21230;product=alpha/beta hydrolase family protein;protein_id=WP_003899402.1;transl_table=11 NZ_KK316855.1 RefSeq gene 125904 126158 . + . ID=gene-AL60_RS0105260;Name=AL60_RS0105260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105260;old_locus_tag=AL60_03204 NZ_KK316855.1 Protein Homology CDS 125904 126158 . + 0 ID=cds-WP_023637464.1;Parent=gene-AL60_RS0105260;Dbxref=GenBank:WP_023637464.1;Name=WP_023637464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303543.1;locus_tag=AL60_RS0105260;product=hypothetical protein;protein_id=WP_023637464.1;transl_table=11 NZ_KK316855.1 RefSeq gene 126505 127629 . + . ID=gene-AL60_RS21235;Name=AL60_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21235;old_locus_tag=AL60_03205 NZ_KK316855.1 Protein Homology CDS 126505 127629 . + 0 ID=cds-WP_003413610.1;Parent=gene-AL60_RS21235;Dbxref=GenBank:WP_003413610.1;Name=WP_003413610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217145.1;locus_tag=AL60_RS21235;product=Rv2629 family ribosome hibernation factor;protein_id=WP_003413610.1;transl_table=11 NZ_KK316855.1 RefSeq gene 127631 128170 . + . ID=gene-AL60_RS21240;Name=AL60_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21240;old_locus_tag=AL60_03206 NZ_KK316855.1 Protein Homology CDS 127631 128170 . + 0 ID=cds-WP_003413614.1;Parent=gene-AL60_RS21240;Dbxref=GenBank:WP_003413614.1;Name=WP_003413614.1;Ontology_term=GO:0006388,GO:0046872,GO:0072669;gbkey=CDS;go_component=tRNA-splicing ligase complex|0072669||IEA;go_function=metal ion binding|0046872||IEA;go_process=tRNA splicing%2C via endonucleolytic cleavage and ligation|0006388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217146.1;locus_tag=AL60_RS21240;product=archease;protein_id=WP_003413614.1;transl_table=11 NZ_KK316855.1 RefSeq pseudogene 128186 129608 . + . ID=gene-AL60_RS21245;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=pseudogene;locus_tag=AL60_RS21245;old_locus_tag=AL60_03207;pseudo=true NZ_KK316855.1 Protein Homology CDS 128186 129608 . + 0 ID=cds-AL60_RS21245;Parent=gene-AL60_RS21245;Note=frameshifted;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351416.1;locus_tag=AL60_RS21245;product=RNA-splicing ligase RtcB;pseudo=true;transl_table=11 NZ_KK316855.1 RefSeq gene 129647 129928 . - . ID=gene-AL60_RS21250;Name=AL60_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21250;old_locus_tag=AL60_03208 NZ_KK316855.1 Protein Homology CDS 129647 129928 . - 0 ID=cds-WP_003413619.1;Parent=gene-AL60_RS21250;Dbxref=GenBank:WP_003413619.1;Name=WP_003413619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217148.1;locus_tag=AL60_RS21250;product=DUF1876 domain-containing protein;protein_id=WP_003413619.1;transl_table=11 NZ_KK316855.1 RefSeq gene 130073 130558 . - . ID=gene-AL60_RS21255;Name=AL60_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21255;old_locus_tag=AL60_03209 NZ_KK316855.1 Protein Homology CDS 130073 130558 . - 0 ID=cds-WP_003413625.1;Parent=gene-AL60_RS21255;Dbxref=GenBank:WP_003413625.1;Name=WP_003413625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217149.1;locus_tag=AL60_RS21255;product=non-heme di-iron catalase;protein_id=WP_003413625.1;transl_table=11 NZ_KK316855.1 RefSeq gene 130585 130839 . - . ID=gene-AL60_RS26355;Name=AL60_RS26355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26355 NZ_KK316855.1 Protein Homology CDS 130585 130839 . - 0 ID=cds-WP_003908019.1;Parent=gene-AL60_RS26355;Dbxref=GenBank:WP_003908019.1;Name=WP_003908019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908019.1;locus_tag=AL60_RS26355;product=hypothetical protein;protein_id=WP_003908019.1;transl_table=11 NZ_KK316855.1 RefSeq gene 130843 133179 . - . ID=gene-AL60_RS21260;Name=AL60_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21260;old_locus_tag=AL60_03210 NZ_KK316855.1 Protein Homology CDS 130843 133179 . - 0 ID=cds-WP_009938544.1;Parent=gene-AL60_RS21260;Dbxref=GenBank:WP_009938544.1;Name=WP_009938544.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177896.1;locus_tag=AL60_RS21260;product=PE family protein;protein_id=WP_009938544.1;transl_table=11 NZ_KK316855.1 RefSeq gene 133208 133450 . + . ID=gene-AL60_RS21265;Name=AL60_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21265;old_locus_tag=AL60_03211 NZ_KK316855.1 Protein Homology CDS 133208 133450 . + 0 ID=cds-WP_003899405.1;Parent=gene-AL60_RS21265;Dbxref=GenBank:WP_003899405.1;Name=WP_003899405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217151.1;locus_tag=AL60_RS21265;product=hypothetical protein;protein_id=WP_003899405.1;transl_table=11 NZ_KK316855.1 RefSeq gene 133451 134128 . + . ID=gene-AL60_RS21270;Name=AL60_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21270;old_locus_tag=AL60_03212 NZ_KK316855.1 Protein Homology CDS 133451 134128 . + 0 ID=cds-WP_003899406.1;Parent=gene-AL60_RS21270;Dbxref=GenBank:WP_003899406.1;Name=WP_003899406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217152.1;locus_tag=AL60_RS21270;product=phosphotransferase-like protein;protein_id=WP_003899406.1;transl_table=11 NZ_KK316855.1 RefSeq gene 134324 134980 . + . ID=gene-AL60_RS21275;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=AL60_RS21275;old_locus_tag=AL60_03213 NZ_KK316855.1 Protein Homology CDS 134324 134980 . + 0 ID=cds-WP_012054325.1;Parent=gene-AL60_RS21275;Dbxref=GenBank:WP_012054325.1;Name=WP_012054325.1;Ontology_term=GO:0016020;gbkey=CDS;gene=dedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217153.1;locus_tag=AL60_RS21275;product=DedA family protein;protein_id=WP_012054325.1;transl_table=11 NZ_KK316855.1 RefSeq gene 135143 135589 . + . ID=gene-AL60_RS21280;Name=AL60_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21280;old_locus_tag=AL60_03214 NZ_KK316855.1 Protein Homology CDS 135143 135589 . + 0 ID=cds-WP_003413657.1;Parent=gene-AL60_RS21280;Dbxref=GenBank:WP_003413657.1;Name=WP_003413657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217154.1;locus_tag=AL60_RS21280;product=anti-sigma factor antagonist;protein_id=WP_003413657.1;transl_table=11 NZ_KK316855.1 RefSeq gene 135764 136096 . - . ID=gene-AL60_RS21285;Name=AL60_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21285;old_locus_tag=AL60_03215 NZ_KK316855.1 Protein Homology CDS 135764 136096 . - 0 ID=cds-WP_003413663.1;Parent=gene-AL60_RS21285;Dbxref=GenBank:WP_003413663.1;Name=WP_003413663.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217155.1;locus_tag=AL60_RS21285;product=YnfA family protein;protein_id=WP_003413663.1;transl_table=11 NZ_KK316855.1 RefSeq gene 136216 136575 . - . ID=gene-AL60_RS21290;Name=AL60_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21290;old_locus_tag=AL60_03216 NZ_KK316855.1 Protein Homology CDS 136216 136575 . - 0 ID=cds-WP_003413665.1;Parent=gene-AL60_RS21290;Dbxref=GenBank:WP_003413665.1;Name=WP_003413665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217156.1;locus_tag=AL60_RS21290;product=Rv2640c family ArsR-like transcriptional regulator;protein_id=WP_003413665.1;transl_table=11 NZ_KK316855.1 RefSeq gene 136677 137135 . + . ID=gene-AL60_RS21295;Name=cadI;gbkey=Gene;gene=cadI;gene_biotype=protein_coding;locus_tag=AL60_RS21295;old_locus_tag=AL60_03217 NZ_KK316855.1 Protein Homology CDS 136677 137135 . + 0 ID=cds-WP_003413675.1;Parent=gene-AL60_RS21295;Dbxref=GenBank:WP_003413675.1;Name=WP_003413675.1;gbkey=CDS;gene=cadI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217157.1;locus_tag=AL60_RS21295;product=cadmium-induced metalloenzyme CadI;protein_id=WP_003413675.1;transl_table=11 NZ_KK316855.1 RefSeq gene 137271 137651 . + . ID=gene-AL60_RS21300;Name=AL60_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21300;old_locus_tag=AL60_03218 NZ_KK316855.1 Protein Homology CDS 137271 137651 . + 0 ID=cds-WP_003899407.1;Parent=gene-AL60_RS21300;Dbxref=GenBank:WP_003899407.1;Name=WP_003899407.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217158.1;locus_tag=AL60_RS21300;product=ArsR/SmtB family transcription factor;protein_id=WP_003899407.1;transl_table=11 NZ_KK316855.1 RefSeq gene 137648 139144 . + . ID=gene-AL60_RS21305;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=AL60_RS21305;old_locus_tag=AL60_03219 NZ_KK316855.1 Protein Homology CDS 137648 139144 . + 0 ID=cds-WP_003413686.1;Parent=gene-AL60_RS21305;Dbxref=GenBank:WP_003413686.1;Name=WP_003413686.1;Ontology_term=GO:0015700,GO:0046685,GO:0008490,GO:0015103,GO:0015297,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite secondary active transmembrane transporter activity|0008490||IEA,inorganic anion transmembrane transporter activity|0015103||IEA,antiporter activity|0015297||IEA;go_process=arsenite transport|0015700||IEA,response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217159.1;locus_tag=AL60_RS21305;product=ACR3 family arsenite efflux transporter;protein_id=WP_003413686.1;transl_table=11 NZ_KK316855.1 RefSeq gene 139379 139570 . + . ID=gene-AL60_RS0105270;Name=AL60_RS0105270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105270 NZ_KK316855.1 Protein Homology CDS 139379 139570 . + 0 ID=cds-WP_003912823.1;Parent=gene-AL60_RS0105270;Dbxref=GenBank:WP_003912823.1;Name=WP_003912823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912823.1;locus_tag=AL60_RS0105270;product=antitoxin MazE family protein;protein_id=WP_003912823.1;transl_table=11 NZ_KK316855.1 RefSeq gene 139685 139816 . + . ID=gene-AL60_RS27995;Name=AL60_RS27995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27995 NZ_KK316855.1 Protein Homology CDS 139685 139816 . + 0 ID=cds-WP_003413709.1;Parent=gene-AL60_RS27995;Dbxref=GenBank:WP_003413709.1;Name=WP_003413709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003413709.1;locus_tag=AL60_RS27995;product=hypothetical protein;protein_id=WP_003413709.1;transl_table=11 NZ_KK316855.1 RefSeq gene 140235 140306 . - . ID=gene-AL60_RS21310;Name=AL60_RS21310;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS21310;old_locus_tag=AL60_03222 NZ_KK316855.1 tRNAscan-SE tRNA 140235 140306 . - . ID=rna-AL60_RS21310;Parent=gene-AL60_RS21310;anticodon=(pos:complement(140272..140274));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS21310;product=tRNA-Val NZ_KK316855.1 tRNAscan-SE exon 140235 140306 . - . ID=exon-AL60_RS21310-1;Parent=rna-AL60_RS21310;anticodon=(pos:complement(140272..140274));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS21310;product=tRNA-Val NZ_KK316855.1 RefSeq gene 140491 140563 . + . ID=gene-AL60_RS21315;Name=AL60_RS21315;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS21315;old_locus_tag=AL60_03223 NZ_KK316855.1 tRNAscan-SE tRNA 140491 140563 . + . ID=rna-AL60_RS21315;Parent=gene-AL60_RS21315;anticodon=(pos:140524..140526);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS21315;product=tRNA-Gly NZ_KK316855.1 tRNAscan-SE exon 140491 140563 . + . ID=exon-AL60_RS21315-1;Parent=rna-AL60_RS21315;anticodon=(pos:140524..140526);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS21315;product=tRNA-Gly NZ_KK316855.1 RefSeq gene 140593 140666 . + . ID=gene-AL60_RS21320;Name=AL60_RS21320;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS21320;old_locus_tag=AL60_03224 NZ_KK316855.1 tRNAscan-SE tRNA 140593 140666 . + . ID=rna-AL60_RS21320;Parent=gene-AL60_RS21320;anticodon=(pos:140625..140627);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS21320;product=tRNA-Cys NZ_KK316855.1 tRNAscan-SE exon 140593 140666 . + . ID=exon-AL60_RS21320-1;Parent=rna-AL60_RS21320;anticodon=(pos:140625..140627);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS21320;product=tRNA-Cys NZ_KK316855.1 RefSeq gene 140680 140754 . + . ID=gene-AL60_RS21325;Name=AL60_RS21325;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS21325;old_locus_tag=AL60_03225 NZ_KK316855.1 tRNAscan-SE tRNA 140680 140754 . + . ID=rna-AL60_RS21325;Parent=gene-AL60_RS21325;anticodon=(pos:140712..140714);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS21325;product=tRNA-Val NZ_KK316855.1 tRNAscan-SE exon 140680 140754 . + . ID=exon-AL60_RS21325-1;Parent=rna-AL60_RS21325;anticodon=(pos:140712..140714);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS21325;product=tRNA-Val NZ_KK316855.1 RefSeq gene 140861 141292 . + . ID=gene-AL60_RS21330;Name=AL60_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21330;old_locus_tag=AL60_03226 NZ_KK316855.1 Protein Homology CDS 140861 141292 . + 0 ID=cds-WP_003899409.1;Parent=gene-AL60_RS21330;Dbxref=GenBank:WP_003899409.1;Name=WP_003899409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217161.1;locus_tag=AL60_RS21330;product=hypothetical protein;protein_id=WP_003899409.1;transl_table=11 NZ_KK316855.1 RefSeq gene 141289 142287 . + . ID=gene-AL60_RS21335;Name=AL60_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21335;old_locus_tag=AL60_03227 NZ_KK316855.1 Protein Homology CDS 141289 142287 . + 0 ID=cds-WP_003900538.1;Parent=gene-AL60_RS21335;Dbxref=GenBank:WP_003900538.1;Name=WP_003900538.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217162.1;locus_tag=AL60_RS21335;product=tyrosine-type recombinase/integrase;protein_id=WP_003900538.1;transl_table=11 NZ_KK316855.1 RefSeq gene 142301 142765 . + . ID=gene-AL60_RS0105280;Name=AL60_RS0105280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105280;old_locus_tag=AL60_03228 NZ_KK316855.1 Protein Homology CDS 142301 142765 . + 0 ID=cds-WP_003900539.1;Parent=gene-AL60_RS0105280;Dbxref=GenBank:WP_003900539.1;Name=WP_003900539.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014273.6;locus_tag=AL60_RS0105280;product=ParB N-terminal domain-containing protein;protein_id=WP_003900539.1;transl_table=11 NZ_KK316855.1 RefSeq gene 142753 143004 . + . ID=gene-AL60_RS0105285;Name=AL60_RS0105285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105285 NZ_KK316855.1 Protein Homology CDS 142753 143004 . + 0 ID=cds-WP_003908028.1;Parent=gene-AL60_RS0105285;Dbxref=GenBank:WP_003908028.1;Name=WP_003908028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487744.1;locus_tag=AL60_RS0105285;product=hypothetical protein;protein_id=WP_003908028.1;transl_table=11 NZ_KK316855.1 RefSeq gene 143175 144614 . - . ID=gene-AL60_RS21340;Name=AL60_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21340;old_locus_tag=AL60_03229 NZ_KK316855.1 Protein Homology CDS 143175 144614 . - 0 ID=cds-WP_003899411.1;Parent=gene-AL60_RS21340;Dbxref=GenBank:WP_003899411.1;Name=WP_003899411.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217166.1;locus_tag=AL60_RS21340;product=phage major capsid protein;protein_id=WP_003899411.1;transl_table=11 NZ_KK316855.1 RefSeq gene 144622 145155 . - . ID=gene-AL60_RS21345;Name=AL60_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21345;old_locus_tag=AL60_03230 NZ_KK316855.1 Protein Homology CDS 144622 145155 . - 0 ID=cds-WP_003899412.1;Parent=gene-AL60_RS21345;Dbxref=GenBank:WP_003899412.1;Name=WP_003899412.1;Ontology_term=GO:0019068,GO:0019082,GO:0005198,GO:0008233;gbkey=CDS;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA,viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217167.1;locus_tag=AL60_RS21345;product=HK97 family phage prohead protease;protein_id=WP_003899412.1;transl_table=11 NZ_KK316855.1 RefSeq gene 145308 145799 . - . ID=gene-AL60_RS26365;Name=AL60_RS26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26365;old_locus_tag=AL60_03231 NZ_KK316855.1 Protein Homology CDS 145308 145799 . - 0 ID=cds-WP_003900541.1;Parent=gene-AL60_RS26365;Dbxref=GenBank:WP_003900541.1;Name=WP_003900541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900541.1;locus_tag=AL60_RS26365;product=phage terminase small subunit P27 family;protein_id=WP_003900541.1;transl_table=11 NZ_KK316855.1 RefSeq gene 145966 146289 . - . ID=gene-AL60_RS21350;Name=AL60_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21350;old_locus_tag=AL60_03232 NZ_KK316855.1 Protein Homology CDS 145966 146289 . - 0 ID=cds-WP_003899414.1;Parent=gene-AL60_RS21350;Dbxref=GenBank:WP_003899414.1;Name=WP_003899414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217169.1;locus_tag=AL60_RS21350;product=type II toxin-antitoxin system toxin;protein_id=WP_003899414.1;transl_table=11 NZ_KK316855.1 RefSeq gene 146369 146614 . - . ID=gene-AL60_RS21355;Name=AL60_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21355;old_locus_tag=AL60_03233 NZ_KK316855.1 Protein Homology CDS 146369 146614 . - 0 ID=cds-WP_003899415.1;Parent=gene-AL60_RS21355;Dbxref=GenBank:WP_003899415.1;Name=WP_003899415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217170.1;locus_tag=AL60_RS21355;product=type II toxin-antitoxin system antitoxin;protein_id=WP_003899415.1;transl_table=11 NZ_KK316855.1 RefSeq gene 146611 148038 . - . ID=gene-AL60_RS21360;Name=AL60_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21360;old_locus_tag=AL60_03234 NZ_KK316855.1 Protein Homology CDS 146611 148038 . - 0 ID=cds-WP_003899416.1;Parent=gene-AL60_RS21360;Dbxref=GenBank:WP_003899416.1;Name=WP_003899416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217171.1;locus_tag=AL60_RS21360;product=DUF3631 domain-containing protein;protein_id=WP_003899416.1;transl_table=11 NZ_KK316855.1 RefSeq gene 148040 148432 . - . ID=gene-AL60_RS21365;Name=AL60_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21365;old_locus_tag=AL60_03235 NZ_KK316855.1 Protein Homology CDS 148040 148432 . - 0 ID=cds-WP_003899417.1;Parent=gene-AL60_RS21365;Dbxref=GenBank:WP_003899417.1;Name=WP_003899417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217172.1;locus_tag=AL60_RS21365;product=DUF2742 domain-containing protein;protein_id=WP_003899417.1;transl_table=11 NZ_KK316855.1 RefSeq gene 148429 148689 . - . ID=gene-AL60_RS0105295;Name=AL60_RS0105295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105295;old_locus_tag=AL60_03236 NZ_KK316855.1 Protein Homology CDS 148429 148689 . - 0 ID=cds-WP_003899418.1;Parent=gene-AL60_RS0105295;Dbxref=GenBank:WP_003899418.1;Name=WP_003899418.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217173.1;locus_tag=AL60_RS0105295;product=helix-turn-helix domain-containing protein;protein_id=WP_003899418.1;transl_table=11 NZ_KK316855.1 RefSeq gene 148706 149068 . - . ID=gene-AL60_RS21370;Name=AL60_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21370;old_locus_tag=AL60_03237 NZ_KK316855.1 Protein Homology CDS 148706 149068 . - 0 ID=cds-WP_003900543.1;Parent=gene-AL60_RS21370;Dbxref=GenBank:WP_003900543.1;Name=WP_003900543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217174.1;locus_tag=AL60_RS21370;product=hypothetical protein;protein_id=WP_003900543.1;transl_table=11 NZ_KK316855.1 RefSeq gene 149071 150198 . - . ID=gene-AL60_RS21375;Name=AL60_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21375;old_locus_tag=AL60_03238 NZ_KK316855.1 Protein Homology CDS 149071 150198 . - 0 ID=cds-WP_003899420.1;Parent=gene-AL60_RS21375;Dbxref=GenBank:WP_003899420.1;Name=WP_003899420.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217175.1;locus_tag=AL60_RS21375;product=tyrosine-type recombinase/integrase;protein_id=WP_003899420.1;transl_table=11 NZ_KK316855.1 RefSeq gene 150343 150570 . - . ID=gene-AL60_RS21380;Name=AL60_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21380;old_locus_tag=AL60_03239 NZ_KK316855.1 Protein Homology CDS 150343 150570 . - 0 ID=cds-WP_003899421.1;Parent=gene-AL60_RS21380;Dbxref=GenBank:WP_003899421.1;Name=WP_003899421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217176.1;locus_tag=AL60_RS21380;product=hypothetical protein;protein_id=WP_003899421.1;transl_table=11 NZ_KK316855.1 RefSeq gene 150567 150956 . - . ID=gene-AL60_RS26370;Name=AL60_RS26370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26370;old_locus_tag=AL60_03240 NZ_KK316855.1 Protein Homology CDS 150567 150956 . - 0 ID=cds-WP_003899422.1;Parent=gene-AL60_RS26370;Dbxref=GenBank:WP_003899422.1;Name=WP_003899422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217177.1;locus_tag=AL60_RS26370;product=hypothetical protein;protein_id=WP_003899422.1;transl_table=11 NZ_KK316855.1 RefSeq gene 150862 151134 . + . ID=gene-AL60_RS21385;Name=AL60_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21385;old_locus_tag=AL60_03241 NZ_KK316855.1 Protein Homology CDS 150862 151134 . + 0 ID=cds-WP_003900544.1;Parent=gene-AL60_RS21385;Dbxref=GenBank:WP_003900544.1;Name=WP_003900544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217178.1;locus_tag=AL60_RS21385;product=hypothetical protein;protein_id=WP_003900544.1;transl_table=11 NZ_KK316855.1 RefSeq gene 151233 151466 . + . ID=gene-AL60_RS21390;Name=AL60_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21390;old_locus_tag=AL60_03242 NZ_KK316855.1 Protein Homology CDS 151233 151466 . + 0 ID=cds-WP_003413717.1;Parent=gene-AL60_RS21390;Dbxref=GenBank:WP_003413717.1;Name=WP_003413717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217179.1;locus_tag=AL60_RS21390;product=hypothetical protein;protein_id=WP_003413717.1;transl_table=11 NZ_KK316855.1 RefSeq gene 151477 151731 . + . ID=gene-AL60_RS21395;Name=AL60_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21395;old_locus_tag=AL60_03243 NZ_KK316855.1 Protein Homology CDS 151477 151731 . + 0 ID=cds-WP_003413719.1;Parent=gene-AL60_RS21395;Dbxref=GenBank:WP_003413719.1;Name=WP_003413719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217180.1;locus_tag=AL60_RS21395;product=hypothetical protein;protein_id=WP_003413719.1;transl_table=11 NZ_KK316855.1 RefSeq gene 152079 152360 . + . ID=gene-AL60_RS21400;Name=AL60_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21400;old_locus_tag=AL60_03244 NZ_KK316855.1 Protein Homology CDS 152079 152360 . + 0 ID=cds-WP_003899423.1;Parent=gene-AL60_RS21400;Dbxref=GenBank:WP_003899423.1;Name=WP_003899423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217181.1;locus_tag=AL60_RS21400;product=hypothetical protein;protein_id=WP_003899423.1;transl_table=11 ##sequence-region NZ_KK316856.1 1 143686 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316856.1 RefSeq region 1 143686 . + . ID=NZ_KK316856.1:1..143686;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316856.1 RefSeq pseudogene 1 187 . + . ID=gene-AL60_RS21405;Name=esxL;gbkey=Gene;gene=esxL;gene_biotype=pseudogene;locus_tag=AL60_RS21405;old_locus_tag=AL60_03245;partial=true;pseudo=true;start_range=.,1 NZ_KK316856.1 Protein Homology CDS 1 187 . + 1 ID=cds-AL60_RS21405;Parent=gene-AL60_RS21405;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=esxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215553.1;locus_tag=AL60_RS21405;partial=true;product=type VII secretion system ESX-5 protein EsxL;pseudo=true;start_range=.,1;transl_table=11 NZ_KK316856.1 RefSeq gene 255 1502 . - . ID=gene-AL60_RS21410;Name=AL60_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21410;old_locus_tag=AL60_03246 NZ_KK316856.1 Protein Homology CDS 255 1502 . - 0 ID=cds-WP_012054263.1;Parent=gene-AL60_RS21410;Dbxref=GenBank:WP_012054263.1;Name=WP_012054263.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215715.1;locus_tag=AL60_RS21410;product=IS256-like element IS1081 family transposase;protein_id=WP_012054263.1;transl_table=11 NZ_KK316856.1 RefSeq gene 1839 3116 . + . ID=gene-AL60_RS21415;Name=AL60_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21415;old_locus_tag=AL60_03247 NZ_KK316856.1 Protein Homology CDS 1839 3116 . + 0 ID=cds-WP_003406233.1;Parent=gene-AL60_RS21415;Dbxref=GenBank:WP_003406233.1;Name=WP_003406233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215716.1;locus_tag=AL60_RS21415;product=MHS family MFS transporter;protein_id=WP_003406233.1;transl_table=11 NZ_KK316856.1 RefSeq gene 3113 4066 . - . ID=gene-AL60_RS21420;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AL60_RS21420;old_locus_tag=AL60_03248 NZ_KK316856.1 Protein Homology CDS 3113 4066 . - 0 ID=cds-WP_003898768.1;Parent=gene-AL60_RS21420;Dbxref=GenBank:WP_003898768.1;Name=WP_003898768.1;Ontology_term=GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215717.1;locus_tag=AL60_RS21420;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_003898768.1;transl_table=11 NZ_KK316856.1 RefSeq gene 4157 5221 . + . ID=gene-AL60_RS21425;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=AL60_RS21425;old_locus_tag=AL60_03249 NZ_KK316856.1 Protein Homology CDS 4157 5221 . + 0 ID=cds-WP_003406235.1;Parent=gene-AL60_RS21425;Dbxref=GenBank:WP_003406235.1;Name=WP_003406235.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177796.1;locus_tag=AL60_RS21425;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_003406235.1;transl_table=11 NZ_KK316856.1 RefSeq pseudogene 5218 7521 . - . ID=gene-AL60_RS21435;Name=AL60_RS21435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS21435;old_locus_tag=AL60_03251;pseudo=true NZ_KK316856.1 Protein Homology CDS 5218 7521 . - 0 ID=cds-AL60_RS21435;Parent=gene-AL60_RS21435;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015289657.1;locus_tag=AL60_RS21435;product=AAA family ATPase;pseudo=true;transl_table=11 NZ_KK316856.1 RefSeq gene 7616 8179 . + . ID=gene-AL60_RS21440;Name=AL60_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21440;old_locus_tag=AL60_03252 NZ_KK316856.1 Protein Homology CDS 7616 8179 . + 0 ID=cds-WP_003898770.1;Parent=gene-AL60_RS21440;Dbxref=GenBank:WP_003898770.1;Name=WP_003898770.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215721.1;locus_tag=AL60_RS21440;product=LOG family protein;protein_id=WP_003898770.1;transl_table=11 NZ_KK316856.1 RefSeq gene 8229 10022 . + . ID=gene-AL60_RS21445;Name=fadD6;gbkey=Gene;gene=fadD6;gene_biotype=protein_coding;locus_tag=AL60_RS21445;old_locus_tag=AL60_03253 NZ_KK316856.1 Protein Homology CDS 8229 10022 . + 0 ID=cds-WP_003406240.1;Parent=gene-AL60_RS21445;Dbxref=GenBank:WP_003406240.1;Name=WP_003406240.1;gbkey=CDS;gene=fadD6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215722.1;locus_tag=AL60_RS21445;product=long-chain-acyl-CoA synthetase FadD6;protein_id=WP_003406240.1;transl_table=11 NZ_KK316856.1 RefSeq gene 10088 11044 . + . ID=gene-AL60_RS21455;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AL60_RS21455;old_locus_tag=AL60_03254 NZ_KK316856.1 Protein Homology CDS 10088 11044 . + 0 ID=cds-WP_003406241.1;Parent=gene-AL60_RS21455;Dbxref=GenBank:WP_003406241.1;Name=WP_003406241.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215723.1;locus_tag=AL60_RS21455;product=dihydropteroate synthase;protein_id=WP_003406241.1;transl_table=11 NZ_KK316856.1 RefSeq gene 11041 12015 . + . ID=gene-AL60_RS21460;Name=gpgS;gbkey=Gene;gene=gpgS;gene_biotype=protein_coding;locus_tag=AL60_RS21460;old_locus_tag=AL60_03255 NZ_KK316856.1 Protein Homology CDS 11041 12015 . + 0 ID=cds-WP_003406242.1;Parent=gene-AL60_RS21460;Dbxref=GenBank:WP_003406242.1;Name=WP_003406242.1;gbkey=CDS;gene=gpgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215724.1;locus_tag=AL60_RS21460;product=glucosyl-3-phosphoglycerate synthase;protein_id=WP_003406242.1;transl_table=11 NZ_KK316856.1 RefSeq gene 12054 12422 . + . ID=gene-AL60_RS21465;Name=AL60_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21465;old_locus_tag=AL60_03256 NZ_KK316856.1 Protein Homology CDS 12054 12422 . + 0 ID=cds-WP_003406243.1;Parent=gene-AL60_RS21465;Dbxref=GenBank:WP_003406243.1;Name=WP_003406243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215725.1;locus_tag=AL60_RS21465;product=DivIVA domain-containing protein;protein_id=WP_003406243.1;transl_table=11 NZ_KK316856.1 RefSeq gene 12419 13033 . + . ID=gene-AL60_RS21470;Name=tagA;gbkey=Gene;gene=tagA;gene_biotype=protein_coding;locus_tag=AL60_RS21470;old_locus_tag=AL60_03257 NZ_KK316856.1 Protein Homology CDS 12419 13033 . + 0 ID=cds-WP_003406244.1;Parent=gene-AL60_RS21470;Dbxref=GenBank:WP_003406244.1;Name=WP_003406244.1;gbkey=CDS;gene=tagA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215726.1;locus_tag=AL60_RS21470;product=DNA-3-methyladenine glycosylase I;protein_id=WP_003406244.1;transl_table=11 NZ_KK316856.1 RefSeq gene 13200 13367 . + . ID=gene-AL60_RS21475;Name=AL60_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21475;old_locus_tag=AL60_03258 NZ_KK316856.1 Protein Homology CDS 13200 13367 . + 0 ID=cds-WP_003406247.1;Parent=gene-AL60_RS21475;Dbxref=GenBank:WP_003406247.1;Name=WP_003406247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003945169.1;locus_tag=AL60_RS21475;product=DUF3117 domain-containing protein;protein_id=WP_003406247.1;transl_table=11 NZ_KK316856.1 RefSeq gene 13395 14558 . - . ID=gene-AL60_RS21480;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=AL60_RS21480;old_locus_tag=AL60_03259 NZ_KK316856.1 Protein Homology CDS 13395 14558 . - 0 ID=cds-WP_012054264.1;Parent=gene-AL60_RS21480;Dbxref=GenBank:WP_012054264.1;Name=WP_012054264.1;Ontology_term=GO:0009250,GO:0004373,GO:0016740;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA,transferase activity|0016740||IEA;go_process=glucan biosynthetic process|0009250||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215728.1;locus_tag=AL60_RS21480;product=glycogen synthase;protein_id=WP_012054264.1;transl_table=11 NZ_KK316856.1 RefSeq gene 14733 15947 . + . ID=gene-AL60_RS21485;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AL60_RS21485;old_locus_tag=AL60_03260 NZ_KK316856.1 Protein Homology CDS 14733 15947 . + 0 ID=cds-WP_003406249.1;Parent=gene-AL60_RS21485;Dbxref=GenBank:WP_003406249.1;Name=WP_003406249.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011781656.1;locus_tag=AL60_RS21485;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_003406249.1;transl_table=11 NZ_KK316856.1 RefSeq pseudogene 16046 16549 . - . ID=gene-AL60_RS27340;Name=AL60_RS27340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27340;old_locus_tag=AL60_03261;partial=true;pseudo=true;start_range=.,16046 NZ_KK316856.1 Protein Homology CDS 16046 16549 . - 0 ID=cds-AL60_RS27340;Parent=gene-AL60_RS27340;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177965.1;locus_tag=AL60_RS27340;partial=true;product=PE family protein;pseudo=true;start_range=.,16046;transl_table=11 NZ_KK316856.1 RefSeq gene 16657 18342 . - . ID=gene-AL60_RS21495;Name=AL60_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21495;old_locus_tag=AL60_03262 NZ_KK316856.1 Protein Homology CDS 16657 18342 . - 0 ID=cds-WP_003898774.1;Parent=gene-AL60_RS21495;Dbxref=GenBank:WP_003898774.1;Name=WP_003898774.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215731.1;locus_tag=AL60_RS21495;product=CocE/NonD family hydrolase;protein_id=WP_003898774.1;transl_table=11 NZ_KK316856.1 RefSeq gene 18370 19044 . - . ID=gene-AL60_RS21500;Name=AL60_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21500;old_locus_tag=AL60_03263 NZ_KK316856.1 Protein Homology CDS 18370 19044 . - 0 ID=cds-WP_003406252.1;Parent=gene-AL60_RS21500;Dbxref=GenBank:WP_003406252.1;Name=WP_003406252.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215732.1;locus_tag=AL60_RS21500;product=methyltransferase family protein;protein_id=WP_003406252.1;transl_table=11 NZ_KK316856.1 RefSeq gene 19053 20699 . - . ID=gene-AL60_RS21505;Name=AL60_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21505;old_locus_tag=AL60_03264 NZ_KK316856.1 Protein Homology CDS 19053 20699 . - 0 ID=cds-WP_003898775.1;Parent=gene-AL60_RS21505;Dbxref=GenBank:WP_003898775.1;Name=WP_003898775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215733.1;locus_tag=AL60_RS21505;product=multidrug efflux ABC transporter permease;protein_id=WP_003898775.1;transl_table=11 NZ_KK316856.1 RefSeq gene 20696 21631 . - . ID=gene-AL60_RS21510;Name=AL60_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21510;old_locus_tag=AL60_03265 NZ_KK316856.1 Protein Homology CDS 20696 21631 . - 0 ID=cds-WP_003906541.1;Parent=gene-AL60_RS21510;Dbxref=GenBank:WP_003906541.1;Name=WP_003906541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215734.1;locus_tag=AL60_RS21510;product=multidrug efflux ABC transporter ATP-binding protein;protein_id=WP_003906541.1;transl_table=11 NZ_KK316856.1 RefSeq gene 21621 22259 . - . ID=gene-AL60_RS21515;Name=raaS;gbkey=Gene;gene=raaS;gene_biotype=protein_coding;locus_tag=AL60_RS21515;old_locus_tag=AL60_03266 NZ_KK316856.1 Protein Homology CDS 21621 22259 . - 0 ID=cds-WP_003406254.1;Parent=gene-AL60_RS21515;Dbxref=GenBank:WP_003406254.1;Name=WP_003406254.1;gbkey=CDS;gene=raaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215735.1;locus_tag=AL60_RS21515;product=transcriptional regulator RaaS;protein_id=WP_003406254.1;transl_table=11 NZ_KK316856.1 RefSeq gene 22401 23048 . - . ID=gene-AL60_RS21520;Name=AL60_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21520;old_locus_tag=AL60_03267 NZ_KK316856.1 Protein Homology CDS 22401 23048 . - 0 ID=cds-WP_003406255.1;Parent=gene-AL60_RS21520;Dbxref=GenBank:WP_003406255.1;Name=WP_003406255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003406255.1;locus_tag=AL60_RS21520;product=SAM-dependent O-methyltransferase;protein_id=WP_003406255.1;transl_table=11 NZ_KK316856.1 RefSeq gene 23311 24084 . + . ID=gene-AL60_RS21525;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=AL60_RS21525;old_locus_tag=AL60_03268 NZ_KK316856.1 Protein Homology CDS 23311 24084 . + 0 ID=cds-WP_003406257.1;Parent=gene-AL60_RS21525;Dbxref=GenBank:WP_003406257.1;Name=WP_003406257.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=sigE;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215737.1;locus_tag=AL60_RS21525;product=RNA polymerase sigma factor SigE;protein_id=WP_003406257.1;transl_table=11 NZ_KK316856.1 RefSeq gene 24242 24706 . + . ID=gene-AL60_RS21530;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=AL60_RS21530;old_locus_tag=AL60_03269 NZ_KK316856.1 Protein Homology CDS 24242 24706 . + 0 ID=cds-WP_003406258.1;Parent=gene-AL60_RS21530;Dbxref=GenBank:WP_003406258.1;Name=WP_003406258.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215738.1;locus_tag=AL60_RS21530;product=anti-sigma E factor RseA;protein_id=WP_003406258.1;transl_table=11 NZ_KK316856.1 RefSeq gene 24846 26360 . + . ID=gene-AL60_RS21535;Name=htrA;gbkey=Gene;gene=htrA;gene_biotype=protein_coding;locus_tag=AL60_RS21535;old_locus_tag=AL60_03270 NZ_KK316856.1 Protein Homology CDS 24846 26360 . + 0 ID=cds-WP_003911452.1;Parent=gene-AL60_RS21535;Dbxref=GenBank:WP_003911452.1;Name=WP_003911452.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=htrA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007773721.1;locus_tag=AL60_RS21535;product=serine protease HtrA;protein_id=WP_003911452.1;transl_table=11 NZ_KK316856.1 RefSeq gene 26362 26757 . + . ID=gene-AL60_RS21540;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=AL60_RS21540;old_locus_tag=AL60_03271 NZ_KK316856.1 Protein Homology CDS 26362 26757 . + 0 ID=cds-WP_003898780.1;Parent=gene-AL60_RS21540;Dbxref=GenBank:WP_003898780.1;Name=WP_003898780.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215740.1;locus_tag=AL60_RS21540;product=Sec-independent protein translocase protein TatB;protein_id=WP_003898780.1;transl_table=11 NZ_KK316856.1 RefSeq gene 26790 27620 . - . ID=gene-AL60_RS21545;Name=AL60_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21545;old_locus_tag=AL60_03272 NZ_KK316856.1 Protein Homology CDS 26790 27620 . - 0 ID=cds-WP_003406261.1;Parent=gene-AL60_RS21545;Dbxref=GenBank:WP_003406261.1;Name=WP_003406261.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215741.1;locus_tag=AL60_RS21545;product=HAD-IIA family hydrolase;protein_id=WP_003406261.1;transl_table=11 NZ_KK316856.1 RefSeq gene 27731 29194 . - . ID=gene-AL60_RS21550;Name=AL60_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21550;old_locus_tag=AL60_03273 NZ_KK316856.1 Protein Homology CDS 27731 29194 . - 0 ID=cds-WP_003898781.1;Parent=gene-AL60_RS21550;Dbxref=GenBank:WP_003898781.1;Name=WP_003898781.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215742.1;locus_tag=AL60_RS21550;product=PH domain-containing protein;protein_id=WP_003898781.1;transl_table=11 NZ_KK316856.1 RefSeq gene 29191 29724 . - . ID=gene-AL60_RS21555;Name=AL60_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21555;old_locus_tag=AL60_03274 NZ_KK316856.1 Protein Homology CDS 29191 29724 . - 0 ID=cds-WP_003406264.1;Parent=gene-AL60_RS21555;Dbxref=GenBank:WP_003406264.1;Name=WP_003406264.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215743.1;locus_tag=AL60_RS21555;product=PH domain-containing protein;protein_id=WP_003406264.1;transl_table=11 NZ_KK316856.1 RefSeq gene 29819 30376 . + . ID=gene-AL60_RS21560;Name=AL60_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21560;old_locus_tag=AL60_03275 NZ_KK316856.1 Protein Homology CDS 29819 30376 . + 0 ID=cds-WP_003406266.1;Parent=gene-AL60_RS21560;Dbxref=GenBank:WP_003406266.1;Name=WP_003406266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215744.1;locus_tag=AL60_RS21560;product=hypothetical protein;protein_id=WP_003406266.1;transl_table=11 NZ_KK316856.1 RefSeq gene 30428 30601 . + . ID=gene-AL60_RS26390;Name=AL60_RS26390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26390 NZ_KK316856.1 Protein Homology CDS 30428 30601 . + 0 ID=cds-WP_003908664.1;Parent=gene-AL60_RS26390;Dbxref=GenBank:WP_003908664.1;Name=WP_003908664.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030032.1;locus_tag=AL60_RS26390;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003908664.1;transl_table=11 NZ_KK316856.1 RefSeq gene 30676 31848 . - . ID=gene-AL60_RS21565;Name=mrp;gbkey=Gene;gene=mrp;gene_biotype=protein_coding;locus_tag=AL60_RS21565;old_locus_tag=AL60_03276 NZ_KK316856.1 Protein Homology CDS 30676 31848 . - 0 ID=cds-WP_003406273.1;Parent=gene-AL60_RS21565;Dbxref=GenBank:WP_003406273.1;Name=WP_003406273.1;gbkey=CDS;gene=mrp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215745.1;locus_tag=AL60_RS21565;product=Mrp/NBP35 family ATP-binding protein;protein_id=WP_003406273.1;transl_table=11 NZ_KK316856.1 RefSeq gene 31861 33096 . - . ID=gene-AL60_RS21570;Name=AL60_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21570;old_locus_tag=AL60_03277 NZ_KK316856.1 Protein Homology CDS 31861 33096 . - 0 ID=cds-WP_003406276.1;Parent=gene-AL60_RS21570;Dbxref=GenBank:WP_003406276.1;Name=WP_003406276.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215746.1;locus_tag=AL60_RS21570;product=lytic transglycosylase domain-containing protein;protein_id=WP_003406276.1;transl_table=11 NZ_KK316856.1 RefSeq gene 33221 33763 . - . ID=gene-AL60_RS21575;Name=AL60_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21575;old_locus_tag=AL60_03278 NZ_KK316856.1 Protein Homology CDS 33221 33763 . - 0 ID=cds-WP_003406283.1;Parent=gene-AL60_RS21575;Dbxref=GenBank:WP_003406283.1;Name=WP_003406283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215747.1;locus_tag=AL60_RS21575;product=DUF1003 domain-containing protein;protein_id=WP_003406283.1;transl_table=11 NZ_KK316856.1 RefSeq gene 33760 35067 . - . ID=gene-AL60_RS21580;Name=AL60_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21580;old_locus_tag=AL60_03279 NZ_KK316856.1 Protein Homology CDS 33760 35067 . - 0 ID=cds-WP_003406286.1;Parent=gene-AL60_RS21580;Dbxref=GenBank:WP_003406286.1;Name=WP_003406286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215748.1;locus_tag=AL60_RS21580;product=magnesium transporter;protein_id=WP_003406286.1;transl_table=11 NZ_KK316856.1 RefSeq gene 35129 35725 . - . ID=gene-AL60_RS21585;Name=AL60_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21585;old_locus_tag=AL60_03280 NZ_KK316856.1 Protein Homology CDS 35129 35725 . - 0 ID=cds-WP_003406288.1;Parent=gene-AL60_RS21585;Dbxref=GenBank:WP_003406288.1;Name=WP_003406288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215749.1;locus_tag=AL60_RS21585;product=DUF4190 domain-containing protein;protein_id=WP_003406288.1;transl_table=11 NZ_KK316856.1 RefSeq gene 35875 36402 . + . ID=gene-AL60_RS21590;Name=AL60_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21590;old_locus_tag=AL60_03281 NZ_KK316856.1 Protein Homology CDS 35875 36402 . + 0 ID=cds-WP_003406290.1;Parent=gene-AL60_RS21590;Dbxref=GenBank:WP_003406290.1;Name=WP_003406290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215750.1;locus_tag=AL60_RS21590;product=YflT domain-containing protein;protein_id=WP_003406290.1;transl_table=11 NZ_KK316856.1 RefSeq gene 36423 37829 . + . ID=gene-AL60_RS21595;Name=lpqY;gbkey=Gene;gene=lpqY;gene_biotype=protein_coding;locus_tag=AL60_RS21595;old_locus_tag=AL60_03282 NZ_KK316856.1 Protein Homology CDS 36423 37829 . + 0 ID=cds-WP_003898783.1;Parent=gene-AL60_RS21595;Dbxref=GenBank:WP_003898783.1;Name=WP_003898783.1;gbkey=CDS;gene=lpqY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215751.1;locus_tag=AL60_RS21595;product=trehalose ABC transporter substrate-binding protein LpqY;protein_id=WP_003898783.1;transl_table=11 NZ_KK316856.1 RefSeq gene 37826 38749 . + . ID=gene-AL60_RS21600;Name=sugA;gbkey=Gene;gene=sugA;gene_biotype=protein_coding;locus_tag=AL60_RS21600;old_locus_tag=AL60_03283 NZ_KK316856.1 Protein Homology CDS 37826 38749 . + 0 ID=cds-WP_003406295.1;Parent=gene-AL60_RS21600;Dbxref=GenBank:WP_003406295.1;Name=WP_003406295.1;gbkey=CDS;gene=sugA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215752.1;locus_tag=AL60_RS21600;product=trehalose ABC transporter permease SugA;protein_id=WP_003406295.1;transl_table=11 NZ_KK316856.1 RefSeq gene 38754 39578 . + . ID=gene-AL60_RS21605;Name=sugB;gbkey=Gene;gene=sugB;gene_biotype=protein_coding;locus_tag=AL60_RS21605;old_locus_tag=AL60_03284 NZ_KK316856.1 Protein Homology CDS 38754 39578 . + 0 ID=cds-WP_003900298.1;Parent=gene-AL60_RS21605;Dbxref=GenBank:WP_003900298.1;Name=WP_003900298.1;gbkey=CDS;gene=sugB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215753.1;locus_tag=AL60_RS21605;product=trehalose ABC transporter permease SugB;protein_id=WP_003900298.1;transl_table=11 NZ_KK316856.1 RefSeq gene 39583 40764 . + . ID=gene-AL60_RS21610;Name=sugC;gbkey=Gene;gene=sugC;gene_biotype=protein_coding;locus_tag=AL60_RS21610;old_locus_tag=AL60_03285 NZ_KK316856.1 Protein Homology CDS 39583 40764 . + 0 ID=cds-WP_003406299.1;Parent=gene-AL60_RS21610;Dbxref=GenBank:WP_003406299.1;Name=WP_003406299.1;gbkey=CDS;gene=sugC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215754.1;locus_tag=AL60_RS21610;product=trehalose ABC transporter ATP-binding protein SugC;protein_id=WP_003406299.1;transl_table=11 NZ_KK316856.1 RefSeq gene 40841 41941 . - . ID=gene-AL60_RS21615;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AL60_RS21615;old_locus_tag=AL60_03286 NZ_KK316856.1 Protein Homology CDS 40841 41941 . - 0 ID=cds-WP_003406300.1;Parent=gene-AL60_RS21615;Dbxref=GenBank:WP_003406300.1;Name=WP_003406300.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215755.1;locus_tag=AL60_RS21615;product=magnesium/cobalt transporter CorA;protein_id=WP_003406300.1;transl_table=11 NZ_KK316856.1 RefSeq gene 42112 43101 . + . ID=gene-AL60_RS21620;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AL60_RS21620;old_locus_tag=AL60_03287 NZ_KK316856.1 Protein Homology CDS 42112 43101 . + 0 ID=cds-WP_003406301.1;Parent=gene-AL60_RS21620;Dbxref=GenBank:WP_003406301.1;Name=WP_003406301.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;gene=mdh;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215756.1;locus_tag=AL60_RS21620;product=malate dehydrogenase;protein_id=WP_003406301.1;transl_table=11 NZ_KK316856.1 RefSeq gene 43177 43437 . + . ID=gene-AL60_RS21625;Name=vapB33;gbkey=Gene;gene=vapB33;gene_biotype=protein_coding;locus_tag=AL60_RS21625;old_locus_tag=AL60_03288 NZ_KK316856.1 Protein Homology CDS 43177 43437 . + 0 ID=cds-WP_003406302.1;Parent=gene-AL60_RS21625;Dbxref=GenBank:WP_003406302.1;Name=WP_003406302.1;gbkey=CDS;gene=vapB33;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215757.1;locus_tag=AL60_RS21625;product=type II toxin-antitoxin system antitoxin VapB33;protein_id=WP_003406302.1;transl_table=11 NZ_KK316856.1 RefSeq gene 43434 43865 . + . ID=gene-AL60_RS21630;Name=AL60_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21630;old_locus_tag=AL60_03289 NZ_KK316856.1 Protein Homology CDS 43434 43865 . + 0 ID=cds-WP_003406304.1;Parent=gene-AL60_RS21630;Dbxref=GenBank:WP_003406304.1;Name=WP_003406304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215758.1;locus_tag=AL60_RS21630;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003406304.1;transl_table=11 NZ_KK316856.1 RefSeq gene 43888 45576 . - . ID=gene-AL60_RS21635;Name=AL60_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21635;old_locus_tag=AL60_03290 NZ_KK316856.1 Protein Homology CDS 43888 45576 . - 0 ID=cds-WP_003910308.1;Parent=gene-AL60_RS21635;Dbxref=GenBank:WP_003910308.1;Name=WP_003910308.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177798.1;locus_tag=AL60_RS21635;product=PE family protein;protein_id=WP_003910308.1;transl_table=11 NZ_KK316856.1 RefSeq gene 45756 46616 . + . ID=gene-AL60_RS21640;Name=lpqZ;gbkey=Gene;gene=lpqZ;gene_biotype=protein_coding;locus_tag=AL60_RS21640;old_locus_tag=AL60_03291 NZ_KK316856.1 Protein Homology CDS 45756 46616 . + 0 ID=cds-WP_003900301.1;Parent=gene-AL60_RS21640;Dbxref=GenBank:WP_003900301.1;Name=WP_003900301.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=lpqZ;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215760.1;locus_tag=AL60_RS21640;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_003900301.1;transl_table=11 NZ_KK316856.1 RefSeq gene 46697 47527 . - . ID=gene-AL60_RS21645;Name=AL60_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21645;old_locus_tag=AL60_03292 NZ_KK316856.1 Protein Homology CDS 46697 47527 . - 0 ID=cds-WP_003898788.1;Parent=gene-AL60_RS21645;Dbxref=GenBank:WP_003898788.1;Name=WP_003898788.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215761.1;locus_tag=AL60_RS21645;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003898788.1;transl_table=11 NZ_KK316856.1 RefSeq gene 47584 47877 . - . ID=gene-AL60_RS21650;Name=relE;gbkey=Gene;gene=relE;gene_biotype=protein_coding;locus_tag=AL60_RS21650;old_locus_tag=AL60_03293 NZ_KK316856.1 Protein Homology CDS 47584 47877 . - 0 ID=cds-WP_003898789.1;Parent=gene-AL60_RS21650;Dbxref=GenBank:WP_003898789.1;Name=WP_003898789.1;gbkey=CDS;gene=relE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215762.1;locus_tag=AL60_RS21650;product=type II toxin-antitoxin system mRNA interferase RelE;protein_id=WP_003898789.1;transl_table=11 NZ_KK316856.1 RefSeq gene 47874 48143 . - . ID=gene-AL60_RS21655;Name=relB;gbkey=Gene;gene=relB;gene_biotype=protein_coding;locus_tag=AL60_RS21655;old_locus_tag=AL60_03294 NZ_KK316856.1 Protein Homology CDS 47874 48143 . - 0 ID=cds-WP_003406322.1;Parent=gene-AL60_RS21655;Dbxref=GenBank:WP_003406322.1;Name=WP_003406322.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;gene=relB;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215763.1;locus_tag=AL60_RS21655;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003406322.1;transl_table=11 NZ_KK316856.1 RefSeq gene 48256 51951 . - . ID=gene-AL60_RS21660;Name=AL60_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21660;old_locus_tag=AL60_03295 NZ_KK316856.1 Protein Homology CDS 48256 51951 . - 0 ID=cds-WP_003898790.1;Parent=gene-AL60_RS21660;Dbxref=GenBank:WP_003898790.1;Name=WP_003898790.1;Ontology_term=GO:0006099,GO:0004591,GO:0016746,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,acyltransferase activity|0016746||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215764.2;locus_tag=AL60_RS21660;product=multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;protein_id=WP_003898790.1;transl_table=11 NZ_KK316856.1 RefSeq gene 52093 52881 . - . ID=gene-AL60_RS21665;Name=AL60_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21665;old_locus_tag=AL60_03296 NZ_KK316856.1 Protein Homology CDS 52093 52881 . - 0 ID=cds-WP_003406325.1;Parent=gene-AL60_RS21665;Dbxref=GenBank:WP_003406325.1;Name=WP_003406325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215765.1;locus_tag=AL60_RS21665;product=hypothetical protein;protein_id=WP_003406325.1;transl_table=11 NZ_KK316856.1 RefSeq gene 53078 54817 . + . ID=gene-AL60_RS21670;Name=AL60_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21670;old_locus_tag=AL60_03297 NZ_KK316856.1 Protein Homology CDS 53078 54817 . + 0 ID=cds-WP_003898791.1;Parent=gene-AL60_RS21670;Dbxref=GenBank:WP_003898791.1;Name=WP_003898791.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215766.1;locus_tag=AL60_RS21670;product=MFS transporter;protein_id=WP_003898791.1;transl_table=11 NZ_KK316856.1 RefSeq gene 54720 58139 . - . ID=gene-AL60_RS21675;Name=AL60_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21675;old_locus_tag=AL60_03298 NZ_KK316856.1 Protein Homology CDS 54720 58139 . - 0 ID=cds-WP_003406332.1;Parent=gene-AL60_RS21675;Dbxref=GenBank:WP_003406332.1;Name=WP_003406332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215767.1;locus_tag=AL60_RS21675;product=TM0106 family RecB-like putative nuclease;protein_id=WP_003406332.1;transl_table=11 NZ_KK316856.1 RefSeq gene 58195 58803 . - . ID=gene-AL60_RS21680;Name=lprE;gbkey=Gene;gene=lprE;gene_biotype=protein_coding;locus_tag=AL60_RS21680;old_locus_tag=AL60_03299 NZ_KK316856.1 Protein Homology CDS 58195 58803 . - 0 ID=cds-WP_003406334.1;Parent=gene-AL60_RS21680;Dbxref=GenBank:WP_003406334.1;Name=WP_003406334.1;gbkey=CDS;gene=lprE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215768.1;locus_tag=AL60_RS21680;product=LppP/LprE family lipoprotein;protein_id=WP_003406334.1;transl_table=11 NZ_KK316856.1 RefSeq gene 58869 60560 . + . ID=gene-AL60_RS21685;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=AL60_RS21685;old_locus_tag=AL60_03300 NZ_KK316856.1 Protein Homology CDS 58869 60560 . + 0 ID=cds-WP_003898793.1;Parent=gene-AL60_RS21685;Dbxref=GenBank:WP_003898793.1;Name=WP_003898793.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215769.1;locus_tag=AL60_RS21685;product=DEAD/DEAH box helicase;protein_id=WP_003898793.1;transl_table=11 NZ_KK316856.1 RefSeq gene 60557 61708 . + . ID=gene-AL60_RS21690;Name=AL60_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21690;old_locus_tag=AL60_03301 NZ_KK316856.1 Protein Homology CDS 60557 61708 . + 0 ID=cds-WP_003406347.1;Parent=gene-AL60_RS21690;Dbxref=GenBank:WP_003406347.1;Name=WP_003406347.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215770.1;locus_tag=AL60_RS21690;product=acyltransferase family protein;protein_id=WP_003406347.1;transl_table=11 NZ_KK316856.1 RefSeq gene 61677 62285 . - . ID=gene-AL60_RS21695;Name=AL60_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21695;old_locus_tag=AL60_03302 NZ_KK316856.1 Protein Homology CDS 61677 62285 . - 0 ID=cds-WP_003406350.1;Parent=gene-AL60_RS21695;Dbxref=GenBank:WP_003406350.1;Name=WP_003406350.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215771.1;locus_tag=AL60_RS21695;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003406350.1;transl_table=11 NZ_KK316856.1 RefSeq gene 62285 63502 . - . ID=gene-AL60_RS21700;Name=cyp130;gbkey=Gene;gene=cyp130;gene_biotype=protein_coding;locus_tag=AL60_RS21700;old_locus_tag=AL60_03303 NZ_KK316856.1 Protein Homology CDS 62285 63502 . - 0 ID=cds-WP_003906560.1;Parent=gene-AL60_RS21700;Dbxref=GenBank:WP_003906560.1;Name=WP_003906560.1;gbkey=CDS;gene=cyp130;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215772.1;locus_tag=AL60_RS21700;product=cytochrome P450 Cyp130;protein_id=WP_003906560.1;transl_table=11 NZ_KK316856.1 RefSeq gene 63616 64983 . - . ID=gene-AL60_RS21705;Name=AL60_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21705;old_locus_tag=AL60_03304 NZ_KK316856.1 Protein Homology CDS 63616 64983 . - 0 ID=cds-WP_003406358.1;Parent=gene-AL60_RS21705;Dbxref=GenBank:WP_003406358.1;Name=WP_003406358.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215773.1;locus_tag=AL60_RS21705;product=FAD-binding oxidoreductase;protein_id=WP_003406358.1;transl_table=11 NZ_KK316856.1 RefSeq gene 64980 66239 . - . ID=gene-AL60_RS21710;Name=AL60_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21710;old_locus_tag=AL60_03305 NZ_KK316856.1 Protein Homology CDS 64980 66239 . - 0 ID=cds-WP_003406359.1;Parent=gene-AL60_RS21710;Dbxref=GenBank:WP_003406359.1;Name=WP_003406359.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215774.1;locus_tag=AL60_RS21710;product=multidrug efflux MFS transporter Tap;protein_id=WP_003406359.1;transl_table=11 NZ_KK316856.1 RefSeq gene 66310 67137 . + . ID=gene-AL60_RS21715;Name=udgB;gbkey=Gene;gene=udgB;gene_biotype=protein_coding;locus_tag=AL60_RS21715;old_locus_tag=AL60_03306 NZ_KK316856.1 Protein Homology CDS 66310 67137 . + 0 ID=cds-WP_003911466.1;Parent=gene-AL60_RS21715;Dbxref=GenBank:WP_003911466.1;Name=WP_003911466.1;gbkey=CDS;gene=udgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011724119.1;locus_tag=AL60_RS21715;product=uracil-DNA glycosylase;protein_id=WP_003911466.1;transl_table=11 NZ_KK316856.1 RefSeq gene 67139 68257 . + . ID=gene-AL60_RS21720;Name=AL60_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21720;old_locus_tag=AL60_03307 NZ_KK316856.1 Protein Homology CDS 67139 68257 . + 0 ID=cds-WP_003406361.1;Parent=gene-AL60_RS21720;Dbxref=GenBank:WP_003406361.1;Name=WP_003406361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215776.1;locus_tag=AL60_RS21720;product=FAD-binding protein;protein_id=WP_003406361.1;transl_table=11 NZ_KK316856.1 RefSeq gene 68383 68832 . - . ID=gene-AL60_RS21725;Name=AL60_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21725;old_locus_tag=AL60_03308 NZ_KK316856.1 Protein Homology CDS 68383 68832 . - 0 ID=cds-WP_003406364.1;Parent=gene-AL60_RS21725;Dbxref=GenBank:WP_003406364.1;Name=WP_003406364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215777.1;locus_tag=AL60_RS21725;product=F420H(2)-dependent quinone reductase;protein_id=WP_003406364.1;transl_table=11 NZ_KK316856.1 RefSeq gene 68837 69271 . - . ID=gene-AL60_RS21730;Name=AL60_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21730;old_locus_tag=AL60_03309 NZ_KK316856.1 Protein Homology CDS 68837 69271 . - 0 ID=cds-WP_003898798.1;Parent=gene-AL60_RS21730;Dbxref=GenBank:WP_003898798.1;Name=WP_003898798.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215778.1;locus_tag=AL60_RS21730;product=HIT family protein;protein_id=WP_003898798.1;transl_table=11 NZ_KK316856.1 RefSeq gene 69330 70718 . + . ID=gene-AL60_RS21735;Name=AL60_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21735;old_locus_tag=AL60_03310 NZ_KK316856.1 Protein Homology CDS 69330 70718 . + 0 ID=cds-WP_003406369.1;Parent=gene-AL60_RS21735;Dbxref=GenBank:WP_003406369.1;Name=WP_003406369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215779.1;locus_tag=AL60_RS21735;product=amidase;protein_id=WP_003406369.1;transl_table=11 NZ_KK316856.1 RefSeq gene 70793 71986 . + . ID=gene-AL60_RS21740;Name=AL60_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21740;old_locus_tag=AL60_03311 NZ_KK316856.1 Protein Homology CDS 70793 71986 . + 0 ID=cds-WP_003406372.1;Parent=gene-AL60_RS21740;Dbxref=GenBank:WP_003406372.1;Name=WP_003406372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215780.1;locus_tag=AL60_RS21740;product=adenylate cyclase;protein_id=WP_003406372.1;transl_table=11 NZ_KK316856.1 RefSeq gene 72159 72839 . + . ID=gene-AL60_RS21745;Name=abmR;gbkey=Gene;gene=abmR;gene_biotype=protein_coding;locus_tag=AL60_RS21745;old_locus_tag=AL60_03312 NZ_KK316856.1 Protein Homology CDS 72159 72839 . + 0 ID=cds-WP_003406375.1;Parent=gene-AL60_RS21745;Dbxref=GenBank:WP_003406375.1;Name=WP_003406375.1;gbkey=CDS;gene=abmR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003406375.1;locus_tag=AL60_RS21745;product=transcriptional regulator AbmR;protein_id=WP_003406375.1;transl_table=11 NZ_KK316856.1 RefSeq gene 72859 74739 . - . ID=gene-AL60_RS21750;Name=pknH;gbkey=Gene;gene=pknH;gene_biotype=protein_coding;locus_tag=AL60_RS21750;old_locus_tag=AL60_03313 NZ_KK316856.1 Protein Homology CDS 72859 74739 . - 0 ID=cds-WP_003898799.1;Parent=gene-AL60_RS21750;Dbxref=GenBank:WP_003898799.1;Name=WP_003898799.1;gbkey=CDS;gene=pknH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215782.1;locus_tag=AL60_RS21750;product=serine/threonine protein kinase PknH;protein_id=WP_003898799.1;transl_table=11 NZ_KK316856.1 RefSeq gene 75080 76246 . - . ID=gene-AL60_RS21755;Name=embR;gbkey=Gene;gene=embR;gene_biotype=protein_coding;locus_tag=AL60_RS21755;old_locus_tag=AL60_03314 NZ_KK316856.1 Protein Homology CDS 75080 76246 . - 0 ID=cds-WP_003406553.1;Parent=gene-AL60_RS21755;Dbxref=GenBank:WP_003406553.1;Name=WP_003406553.1;Note=Phosphorylation of EmbR by cognate serine/threonine kinase PknH leads to increased DNA-binding activity%2C increased expression of embCAB genes%2C and reduced senstivity to ethambutol.;gbkey=CDS;gene=embR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215783.1;locus_tag=AL60_RS21755;product=ATPase/transcriptional regulator EmbR;protein_id=WP_003406553.1;transl_table=11 NZ_KK316856.1 RefSeq gene 76557 77255 . - . ID=gene-AL60_RS21760;Name=AL60_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21760;old_locus_tag=AL60_03315 NZ_KK316856.1 Protein Homology CDS 76557 77255 . - 0 ID=cds-WP_003898800.1;Parent=gene-AL60_RS21760;Dbxref=GenBank:WP_003898800.1;Name=WP_003898800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215784.1;locus_tag=AL60_RS21760;product=C39 family peptidase;protein_id=WP_003898800.1;transl_table=11 NZ_KK316856.1 RefSeq gene 77478 77852 . - . ID=gene-AL60_RS21765;Name=AL60_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21765;old_locus_tag=AL60_03316 NZ_KK316856.1 Protein Homology CDS 77478 77852 . - 0 ID=cds-WP_003406558.1;Parent=gene-AL60_RS21765;Dbxref=GenBank:WP_003406558.1;Name=WP_003406558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215785.1;locus_tag=AL60_RS21765;product=DUF4189 domain-containing protein;protein_id=WP_003406558.1;transl_table=11 NZ_KK316856.1 RefSeq gene 77913 78647 . - . ID=gene-AL60_RS21770;Name=lprA;gbkey=Gene;gene=lprA;gene_biotype=protein_coding;locus_tag=AL60_RS21770;old_locus_tag=AL60_03317 NZ_KK316856.1 Protein Homology CDS 77913 78647 . - 0 ID=cds-WP_003406562.1;Parent=gene-AL60_RS21770;Dbxref=GenBank:WP_003406562.1;Name=WP_003406562.1;gbkey=CDS;gene=lprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215786.1;locus_tag=AL60_RS21770;product=TLR2 agonist LprA;protein_id=WP_003406562.1;transl_table=11 NZ_KK316856.1 RefSeq gene 78860 79201 . - . ID=gene-AL60_RS21775;Name=AL60_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21775;old_locus_tag=AL60_03318 NZ_KK316856.1 Protein Homology CDS 78860 79201 . - 0 ID=cds-WP_003406566.1;Parent=gene-AL60_RS21775;Dbxref=GenBank:WP_003406566.1;Name=WP_003406566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215787.1;locus_tag=AL60_RS21775;product=DUF732 domain-containing protein;protein_id=WP_003406566.1;transl_table=11 NZ_KK316856.1 RefSeq gene 79309 81204 . - . ID=gene-AL60_RS21780;Name=AL60_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21780;old_locus_tag=AL60_03319 NZ_KK316856.1 Protein Homology CDS 79309 81204 . - 0 ID=cds-WP_003406569.1;Parent=gene-AL60_RS21780;Dbxref=GenBank:WP_003406569.1;Name=WP_003406569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215788.1;locus_tag=AL60_RS21780;product=fatty acid ABC transporter ATP-binding protein/permease;protein_id=WP_003406569.1;transl_table=11 NZ_KK316856.1 RefSeq gene 81201 82949 . - . ID=gene-AL60_RS21785;Name=AL60_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21785;old_locus_tag=AL60_03320 NZ_KK316856.1 Protein Homology CDS 81201 82949 . - 0 ID=cds-WP_003406574.1;Parent=gene-AL60_RS21785;Dbxref=GenBank:WP_003406574.1;Name=WP_003406574.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215789.1;locus_tag=AL60_RS21785;product=ABC transporter ATP-binding protein;protein_id=WP_003406574.1;transl_table=11 NZ_KK316856.1 RefSeq gene 83096 83653 . + . ID=gene-AL60_RS21790;Name=lprB;gbkey=Gene;gene=lprB;gene_biotype=protein_coding;locus_tag=AL60_RS21790;old_locus_tag=AL60_03321 NZ_KK316856.1 Protein Homology CDS 83096 83653 . + 0 ID=cds-WP_003901123.1;Parent=gene-AL60_RS21790;Dbxref=GenBank:WP_003901123.1;Name=WP_003901123.1;gbkey=CDS;gene=lprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215790.1;locus_tag=AL60_RS21790;product=DUF3558 domain-containing protein;protein_id=WP_003901123.1;transl_table=11 NZ_KK316856.1 RefSeq gene 83650 84192 . + . ID=gene-AL60_RS21795;Name=lprC;gbkey=Gene;gene=lprC;gene_biotype=protein_coding;locus_tag=AL60_RS21795;old_locus_tag=AL60_03322 NZ_KK316856.1 Protein Homology CDS 83650 84192 . + 0 ID=cds-WP_003900308.1;Parent=gene-AL60_RS21795;Dbxref=GenBank:WP_003900308.1;Name=WP_003900308.1;gbkey=CDS;gene=lprC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215791.1;locus_tag=AL60_RS21795;product=DUF3558 domain-containing protein;protein_id=WP_003900308.1;transl_table=11 NZ_KK316856.1 RefSeq gene 84337 84843 . - . ID=gene-AL60_RS21800;Name=AL60_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21800;old_locus_tag=AL60_03323 NZ_KK316856.1 Protein Homology CDS 84337 84843 . - 0 ID=cds-WP_003898805.1;Parent=gene-AL60_RS21800;Dbxref=GenBank:WP_003898805.1;Name=WP_003898805.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385265.1;locus_tag=AL60_RS21800;product=SixA phosphatase family protein;protein_id=WP_003898805.1;transl_table=11 NZ_KK316856.1 RefSeq gene 85165 86316 . + . ID=gene-AL60_RS21805;Name=AL60_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21805;old_locus_tag=AL60_03324 NZ_KK316856.1 Protein Homology CDS 85165 86316 . + 0 ID=cds-WP_003911418.1;Parent=gene-AL60_RS21805;Dbxref=GenBank:WP_003911418.1;Name=WP_003911418.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011741672.1;locus_tag=AL60_RS21805;product=metallophosphoesterase family protein;protein_id=WP_003911418.1;transl_table=11 NZ_KK316856.1 RefSeq gene 86313 88940 . + . ID=gene-AL60_RS21810;Name=AL60_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21810;old_locus_tag=AL60_03325 NZ_KK316856.1 Protein Homology CDS 86313 88940 . + 0 ID=cds-WP_009937517.1;Parent=gene-AL60_RS21810;Dbxref=GenBank:WP_009937517.1;Name=WP_009937517.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215794.1;locus_tag=AL60_RS21810;product=AAA family ATPase;protein_id=WP_009937517.1;transl_table=11 NZ_KK316856.1 RefSeq gene 88961 90547 . + . ID=gene-AL60_RS21815;Name=AL60_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21815;old_locus_tag=AL60_03326 NZ_KK316856.1 Protein Homology CDS 88961 90547 . + 0 ID=cds-WP_003406598.1;Parent=gene-AL60_RS21815;Dbxref=GenBank:WP_003406598.1;Name=WP_003406598.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215795.1;locus_tag=AL60_RS21815;product=GMC family oxidoreductase;protein_id=WP_003406598.1;transl_table=11 NZ_KK316856.1 RefSeq gene 90564 92339 . - . ID=gene-AL60_RS21820;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=AL60_RS21820;old_locus_tag=AL60_03327 NZ_KK316856.1 Protein Homology CDS 90564 92339 . - 0 ID=cds-WP_003900310.1;Parent=gene-AL60_RS21820;Dbxref=GenBank:WP_003900310.1;Name=WP_003900310.1;gbkey=CDS;gene=oppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215796.1;locus_tag=AL60_RS21820;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_003900310.1;transl_table=11 NZ_KK316856.1 RefSeq gene 92332 94170 . - . ID=gene-AL60_RS21825;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AL60_RS21825;old_locus_tag=AL60_03328 NZ_KK316856.1 Protein Homology CDS 92332 94170 . - 0 ID=cds-WP_003406602.1;Parent=gene-AL60_RS21825;Dbxref=GenBank:WP_003406602.1;Name=WP_003406602.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=oppD;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215797.1;locus_tag=AL60_RS21825;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_003406602.1;transl_table=11 NZ_KK316856.1 RefSeq gene 94167 95042 . - . ID=gene-AL60_RS21830;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=AL60_RS21830;old_locus_tag=AL60_03329 NZ_KK316856.1 Protein Homology CDS 94167 95042 . - 0 ID=cds-WP_003406607.1;Parent=gene-AL60_RS21830;Dbxref=GenBank:WP_003406607.1;Name=WP_003406607.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=oppC;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215798.1;locus_tag=AL60_RS21830;product=ABC transporter permease;protein_id=WP_003406607.1;transl_table=11 NZ_KK316856.1 RefSeq gene 95039 96016 . - . ID=gene-AL60_RS21835;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AL60_RS21835;old_locus_tag=AL60_03330 NZ_KK316856.1 Protein Homology CDS 95039 96016 . - 0 ID=cds-WP_003406613.1;Parent=gene-AL60_RS21835;Dbxref=GenBank:WP_003406613.1;Name=WP_003406613.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215799.1;locus_tag=AL60_RS21835;product=ABC transporter permease;protein_id=WP_003406613.1;transl_table=11 NZ_KK316856.1 RefSeq gene 96223 96714 . + . ID=gene-AL60_RS21840;Name=canA;gbkey=Gene;gene=canA;gene_biotype=protein_coding;locus_tag=AL60_RS21840;old_locus_tag=AL60_03331 NZ_KK316856.1 Protein Homology CDS 96223 96714 . + 0 ID=cds-WP_003406616.1;Parent=gene-AL60_RS21840;Dbxref=GenBank:WP_003406616.1;Name=WP_003406616.1;gbkey=CDS;gene=canA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215800.1;locus_tag=AL60_RS21840;product=beta-carbonic anhydrase CanA;protein_id=WP_003406616.1;transl_table=11 NZ_KK316856.1 RefSeq gene 96808 97806 . + . ID=gene-AL60_RS21845;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=AL60_RS21845;old_locus_tag=AL60_03332 NZ_KK316856.1 Protein Homology CDS 96808 97806 . + 0 ID=cds-WP_003406618.1;Parent=gene-AL60_RS21845;Dbxref=GenBank:WP_003406618.1;Name=WP_003406618.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215801.1;locus_tag=AL60_RS21845;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_003406618.1;transl_table=11 NZ_KK316856.1 RefSeq gene 97806 99650 . + . ID=gene-AL60_RS21850;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=AL60_RS21850;old_locus_tag=AL60_03333 NZ_KK316856.1 Protein Homology CDS 97806 99650 . + 0 ID=cds-WP_012054269.1;Parent=gene-AL60_RS21850;Dbxref=GenBank:WP_012054269.1;Name=WP_012054269.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215802.1;locus_tag=AL60_RS21850;product=adenylyl-sulfate kinase;protein_id=WP_012054269.1;transl_table=11 NZ_KK316856.1 RefSeq gene 99704 100189 . + . ID=gene-AL60_RS21855;Name=AL60_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21855;old_locus_tag=AL60_03334 NZ_KK316856.1 Protein Homology CDS 99704 100189 . + 0 ID=cds-WP_003406624.1;Parent=gene-AL60_RS21855;Dbxref=GenBank:WP_003406624.1;Name=WP_003406624.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215803.1;locus_tag=AL60_RS21855;product=Rrf2 family transcriptional regulator;protein_id=WP_003406624.1;transl_table=11 NZ_KK316856.1 RefSeq gene 100247 101617 . + . ID=gene-AL60_RS21860;Name=AL60_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21860;old_locus_tag=AL60_03335 NZ_KK316856.1 Protein Homology CDS 100247 101617 . + 0 ID=cds-WP_003406625.1;Parent=gene-AL60_RS21860;Dbxref=GenBank:WP_003406625.1;Name=WP_003406625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215804.1;locus_tag=AL60_RS21860;product=esterase;protein_id=WP_003406625.1;transl_table=11 NZ_KK316856.1 RefSeq gene 101666 102298 . + . ID=gene-AL60_RS21865;Name=AL60_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21865;old_locus_tag=AL60_03336 NZ_KK316856.1 Protein Homology CDS 101666 102298 . + 0 ID=cds-WP_003406626.1;Parent=gene-AL60_RS21865;Dbxref=GenBank:WP_003406626.1;Name=WP_003406626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215805.1;locus_tag=AL60_RS21865;product=hypothetical protein;protein_id=WP_003406626.1;transl_table=11 NZ_KK316856.1 RefSeq gene 102381 103946 . - . ID=gene-AL60_RS21870;Name=AL60_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21870;old_locus_tag=AL60_03337 NZ_KK316856.1 Protein Homology CDS 102381 103946 . - 0 ID=cds-WP_003406627.1;Parent=gene-AL60_RS21870;Dbxref=GenBank:WP_003406627.1;Name=WP_003406627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215806.1;locus_tag=AL60_RS21870;product=DUF2254 domain-containing protein;protein_id=WP_003406627.1;transl_table=11 NZ_KK316856.1 RefSeq gene 103957 104271 . + . ID=gene-AL60_RS21875;Name=AL60_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21875;old_locus_tag=AL60_03338 NZ_KK316856.1 Protein Homology CDS 103957 104271 . + 0 ID=cds-WP_003406628.1;Parent=gene-AL60_RS21875;Dbxref=GenBank:WP_003406628.1;Name=WP_003406628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177642.1;locus_tag=AL60_RS21875;product=hypothetical protein;protein_id=WP_003406628.1;transl_table=11 NZ_KK316856.1 RefSeq gene 104398 104733 . - . ID=gene-AL60_RS21880;Name=AL60_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21880;old_locus_tag=AL60_03339 NZ_KK316856.1 Protein Homology CDS 104398 104733 . - 0 ID=cds-WP_003406629.1;Parent=gene-AL60_RS21880;Dbxref=GenBank:WP_003406629.1;Name=WP_003406629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215807.1;locus_tag=AL60_RS21880;product=DUF732 domain-containing protein;protein_id=WP_003406629.1;transl_table=11 NZ_KK316856.1 RefSeq gene 105092 105164 . - . ID=gene-AL60_RS21885;Name=AL60_RS21885;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS21885;old_locus_tag=AL60_03340 NZ_KK316856.1 tRNAscan-SE tRNA 105092 105164 . - . ID=rna-AL60_RS21885;Parent=gene-AL60_RS21885;anticodon=(pos:complement(105129..105131));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS21885;product=tRNA-Arg NZ_KK316856.1 tRNAscan-SE exon 105092 105164 . - . ID=exon-AL60_RS21885-1;Parent=rna-AL60_RS21885;anticodon=(pos:complement(105129..105131));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS21885;product=tRNA-Arg NZ_KK316856.1 RefSeq gene 105278 106930 . + . ID=gene-AL60_RS21890;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AL60_RS21890;old_locus_tag=AL60_03341 NZ_KK316856.1 Protein Homology CDS 105278 106930 . + 0 ID=cds-WP_009937521.1;Parent=gene-AL60_RS21890;Dbxref=GenBank:WP_009937521.1;Name=WP_009937521.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215808.1;locus_tag=AL60_RS21890;product=arginine--tRNA ligase;protein_id=WP_009937521.1;transl_table=11 NZ_KK316856.1 RefSeq gene 106927 108270 . + . ID=gene-AL60_RS21895;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=AL60_RS21895;old_locus_tag=AL60_03342 NZ_KK316856.1 Protein Homology CDS 106927 108270 . + 0 ID=cds-WP_003406632.1;Parent=gene-AL60_RS21895;Dbxref=GenBank:WP_003406632.1;Name=WP_003406632.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215809.1;locus_tag=AL60_RS21895;product=diaminopimelate decarboxylase;protein_id=WP_003406632.1;transl_table=11 NZ_KK316856.1 RefSeq gene 108274 109599 . + . ID=gene-AL60_RS21900;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AL60_RS21900;old_locus_tag=AL60_03343 NZ_KK316856.1 Protein Homology CDS 108274 109599 . + 0 ID=cds-WP_003406648.1;Parent=gene-AL60_RS21900;Dbxref=GenBank:WP_003406648.1;Name=WP_003406648.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;gene=thrA;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215810.1;locus_tag=AL60_RS21900;product=homoserine dehydrogenase;protein_id=WP_003406648.1;transl_table=11 NZ_KK316856.1 RefSeq gene 109596 110678 . + . ID=gene-AL60_RS21905;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=AL60_RS21905;old_locus_tag=AL60_03344 NZ_KK316856.1 Protein Homology CDS 109596 110678 . + 0 ID=cds-WP_003406652.1;Parent=gene-AL60_RS21905;Dbxref=GenBank:WP_003406652.1;Name=WP_003406652.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215811.1;locus_tag=AL60_RS21905;product=threonine synthase;protein_id=WP_003406652.1;transl_table=11 NZ_KK316856.1 RefSeq gene 110896 111846 . + . ID=gene-AL60_RS21910;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=AL60_RS21910;old_locus_tag=AL60_03345 NZ_KK316856.1 Protein Homology CDS 110896 111846 . + 0 ID=cds-WP_003406654.1;Parent=gene-AL60_RS21910;Dbxref=GenBank:WP_003406654.1;Name=WP_003406654.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215812.1;locus_tag=AL60_RS21910;product=homoserine kinase;protein_id=WP_003406654.1;transl_table=11 NZ_KK316856.1 RefSeq gene 112103 113911 . + . ID=gene-AL60_RS21915;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AL60_RS21915;old_locus_tag=AL60_03346 NZ_KK316856.1 Protein Homology CDS 112103 113911 . + 0 ID=cds-WP_003898814.1;Parent=gene-AL60_RS21915;Dbxref=GenBank:WP_003898814.1;Name=WP_003898814.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215813.1;locus_tag=AL60_RS21915;product=transcription termination factor Rho;protein_id=WP_003898814.1;transl_table=11 NZ_KK316856.1 RefSeq gene 114062 114304 . + . ID=gene-AL60_RS21920;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AL60_RS21920;old_locus_tag=AL60_03347 NZ_KK316856.1 Protein Homology CDS 114062 114304 . + 0 ID=cds-WP_003406668.1;Parent=gene-AL60_RS21920;Dbxref=GenBank:WP_003406668.1;Name=WP_003406668.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215814.1;locus_tag=AL60_RS21920;product=50S ribosomal protein L31;protein_id=WP_003406668.1;transl_table=11 NZ_KK316856.1 RefSeq gene 114394 115467 . + . ID=gene-AL60_RS21925;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AL60_RS21925;old_locus_tag=AL60_03348 NZ_KK316856.1 Protein Homology CDS 114394 115467 . + 0 ID=cds-WP_003406670.1;Parent=gene-AL60_RS21925;Dbxref=GenBank:WP_003406670.1;Name=WP_003406670.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215815.1;locus_tag=AL60_RS21925;product=peptide chain release factor 1;protein_id=WP_003406670.1;transl_table=11 NZ_KK316856.1 RefSeq gene 115527 116441 . + . ID=gene-AL60_RS21930;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=AL60_RS21930;old_locus_tag=AL60_03349 NZ_KK316856.1 Protein Homology CDS 115527 116441 . + 0 ID=cds-WP_003917449.1;Parent=gene-AL60_RS21930;Dbxref=GenBank:WP_003917449.1;Name=WP_003917449.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003922247.1;locus_tag=AL60_RS21930;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_003917449.1;transl_table=11 NZ_KK316856.1 RefSeq gene 116457 117110 . + . ID=gene-AL60_RS21935;Name=AL60_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21935;old_locus_tag=AL60_03350 NZ_KK316856.1 Protein Homology CDS 116457 117110 . + 0 ID=cds-WP_003898815.1;Parent=gene-AL60_RS21935;Dbxref=GenBank:WP_003898815.1;Name=WP_003898815.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215817.1;locus_tag=AL60_RS21935;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_003898815.1;transl_table=11 NZ_KK316856.1 RefSeq gene 117194 118408 . + . ID=gene-AL60_RS21940;Name=rfe;gbkey=Gene;gene=rfe;gene_biotype=protein_coding;locus_tag=AL60_RS21940;old_locus_tag=AL60_03351 NZ_KK316856.1 Protein Homology CDS 117194 118408 . + 0 ID=cds-WP_003898816.1;Parent=gene-AL60_RS21940;Dbxref=GenBank:WP_003898816.1;Name=WP_003898816.1;gbkey=CDS;gene=rfe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215818.1;locus_tag=AL60_RS21940;product=UDP-N-acetylglucosamine--decaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_003898816.1;transl_table=11 NZ_KK316856.1 RefSeq gene 118665 119150 . + . ID=gene-AL60_RS21945;Name=AL60_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21945;old_locus_tag=AL60_03352 NZ_KK316856.1 Protein Homology CDS 118665 119150 . + 0 ID=cds-WP_003406680.1;Parent=gene-AL60_RS21945;Dbxref=GenBank:WP_003406680.1;Name=WP_003406680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215819.1;locus_tag=AL60_RS21945;product=ATP synthase subunit I;protein_id=WP_003406680.1;transl_table=11 NZ_KK316856.1 RefSeq gene 119143 119895 . + . ID=gene-AL60_RS21950;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AL60_RS21950;old_locus_tag=AL60_03353 NZ_KK316856.1 Protein Homology CDS 119143 119895 . + 0 ID=cds-WP_003406681.1;Parent=gene-AL60_RS21950;Dbxref=GenBank:WP_003406681.1;Name=WP_003406681.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215820.1;locus_tag=AL60_RS21950;product=F0F1 ATP synthase subunit A;protein_id=WP_003406681.1;transl_table=11 NZ_KK316856.1 RefSeq gene 119944 120189 . + . ID=gene-AL60_RS21955;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=AL60_RS21955;old_locus_tag=AL60_03354 NZ_KK316856.1 Protein Homology CDS 119944 120189 . + 0 ID=cds-WP_003406686.1;Parent=gene-AL60_RS21955;Dbxref=GenBank:WP_003406686.1;Name=WP_003406686.1;gbkey=CDS;gene=atpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215821.1;locus_tag=AL60_RS21955;product=F0F1 ATP synthase subunit C;protein_id=WP_003406686.1;transl_table=11 NZ_KK316856.1 RefSeq gene 120220 120735 . + . ID=gene-AL60_RS21960;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=AL60_RS21960;old_locus_tag=AL60_03355 NZ_KK316856.1 Protein Homology CDS 120220 120735 . + 0 ID=cds-WP_003898818.1;Parent=gene-AL60_RS21960;Dbxref=GenBank:WP_003898818.1;Name=WP_003898818.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpF;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215822.1;locus_tag=AL60_RS21960;product=F0F1 ATP synthase subunit B;protein_id=WP_003898818.1;transl_table=11 NZ_KK316856.1 RefSeq gene 120742 122082 . + . ID=gene-AL60_RS21965;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=AL60_RS21965;old_locus_tag=AL60_03356 NZ_KK316856.1 Protein Homology CDS 120742 122082 . + 0 ID=cds-WP_003406697.1;Parent=gene-AL60_RS21965;Dbxref=GenBank:WP_003406697.1;Name=WP_003406697.1;gbkey=CDS;gene=atpH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215823.1;locus_tag=AL60_RS21965;product=F0F1 ATP synthase subunit B/delta;protein_id=WP_003406697.1;transl_table=11 NZ_KK316856.1 RefSeq gene 122127 123776 . + . ID=gene-AL60_RS21970;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AL60_RS21970;old_locus_tag=AL60_03357 NZ_KK316856.1 Protein Homology CDS 122127 123776 . + 0 ID=cds-WP_003406699.1;Parent=gene-AL60_RS21970;Dbxref=GenBank:WP_003406699.1;Name=WP_003406699.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215824.1;locus_tag=AL60_RS21970;product=F0F1 ATP synthase subunit alpha;protein_id=WP_003406699.1;transl_table=11 NZ_KK316856.1 RefSeq gene 123783 124700 . + . ID=gene-AL60_RS21975;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=AL60_RS21975;old_locus_tag=AL60_03358 NZ_KK316856.1 Protein Homology CDS 123783 124700 . + 0 ID=cds-WP_003898819.1;Parent=gene-AL60_RS21975;Dbxref=GenBank:WP_003898819.1;Name=WP_003898819.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215825.1;locus_tag=AL60_RS21975;product=F0F1 ATP synthase subunit gamma;protein_id=WP_003898819.1;transl_table=11 NZ_KK316856.1 RefSeq gene 124740 126200 . + . ID=gene-AL60_RS21980;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AL60_RS21980;old_locus_tag=AL60_03359 NZ_KK316856.1 Protein Homology CDS 124740 126200 . + 0 ID=cds-WP_003406701.1;Parent=gene-AL60_RS21980;Dbxref=GenBank:WP_003406701.1;Name=WP_003406701.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215826.1;locus_tag=AL60_RS21980;product=F0F1 ATP synthase subunit beta;protein_id=WP_003406701.1;transl_table=11 NZ_KK316856.1 RefSeq gene 126214 126579 . + . ID=gene-AL60_RS21985;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AL60_RS21985;old_locus_tag=AL60_03360 NZ_KK316856.1 Protein Homology CDS 126214 126579 . + 0 ID=cds-WP_003406708.1;Parent=gene-AL60_RS21985;Dbxref=GenBank:WP_003406708.1;Name=WP_003406708.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpC;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215827.1;locus_tag=AL60_RS21985;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_003406708.1;transl_table=11 NZ_KK316856.1 RefSeq gene 126587 127030 . + . ID=gene-AL60_RS21990;Name=AL60_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21990;old_locus_tag=AL60_03361 NZ_KK316856.1 Protein Homology CDS 126587 127030 . + 0 ID=cds-WP_003406722.1;Parent=gene-AL60_RS21990;Dbxref=GenBank:WP_003406722.1;Name=WP_003406722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215828.1;locus_tag=AL60_RS21990;product=DUF2550 domain-containing protein;protein_id=WP_003406722.1;transl_table=11 NZ_KK316856.1 RefSeq gene 127070 128404 . - . ID=gene-AL60_RS21995;Name=AL60_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS21995;old_locus_tag=AL60_03362 NZ_KK316856.1 Protein Homology CDS 127070 128404 . - 0 ID=cds-WP_003900311.1;Parent=gene-AL60_RS21995;Dbxref=GenBank:WP_003900311.1;Name=WP_003900311.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215829.1;locus_tag=AL60_RS21995;product=ISL3-like element IS1557 family transposase;protein_id=WP_003900311.1;transl_table=11 NZ_KK316856.1 RefSeq gene 128570 129151 . - . ID=gene-AL60_RS22000;Name=AL60_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22000;old_locus_tag=AL60_03363 NZ_KK316856.1 Protein Homology CDS 128570 129151 . - 0 ID=cds-WP_003406839.1;Parent=gene-AL60_RS22000;Dbxref=GenBank:WP_003406839.1;Name=WP_003406839.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215830.1;locus_tag=AL60_RS22000;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_003406839.1;transl_table=11 NZ_KK316856.1 RefSeq gene 129220 130476 . + . ID=gene-AL60_RS22005;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=AL60_RS22005;old_locus_tag=AL60_03364 NZ_KK316856.1 Protein Homology CDS 129220 130476 . + 0 ID=cds-WP_003406845.1;Parent=gene-AL60_RS22005;Dbxref=GenBank:WP_003406845.1;Name=WP_003406845.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215831.1;locus_tag=AL60_RS22005;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_003406845.1;transl_table=11 NZ_KK316856.1 RefSeq gene 130748 132279 . + . ID=gene-AL60_RS22010;Name=AL60_RS22010;gbkey=Gene;gene_biotype=rRNA;locus_tag=AL60_RS22010;old_locus_tag=AL60_03365 NZ_KK316856.1 cmsearch rRNA 130748 132279 . + . ID=rna-AL60_RS22010;Parent=gene-AL60_RS22010;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL60_RS22010;product=16S ribosomal RNA NZ_KK316856.1 cmsearch exon 130748 132279 . + . ID=exon-AL60_RS22010-1;Parent=rna-AL60_RS22010;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL60_RS22010;product=16S ribosomal RNA NZ_KK316856.1 RefSeq gene 132557 135694 . + . ID=gene-AL60_RS22015;Name=AL60_RS22015;gbkey=Gene;gene_biotype=rRNA;locus_tag=AL60_RS22015;old_locus_tag=AL60_03366 NZ_KK316856.1 cmsearch rRNA 132557 135694 . + . ID=rna-AL60_RS22015;Parent=gene-AL60_RS22015;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL60_RS22015;product=23S ribosomal RNA NZ_KK316856.1 cmsearch exon 132557 135694 . + . ID=exon-AL60_RS22015-1;Parent=rna-AL60_RS22015;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL60_RS22015;product=23S ribosomal RNA NZ_KK316856.1 RefSeq gene 135799 135911 . + . ID=gene-AL60_RS22020;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AL60_RS22020;old_locus_tag=AL60_03367 NZ_KK316856.1 cmsearch rRNA 135799 135911 . + . ID=rna-AL60_RS22020;Parent=gene-AL60_RS22020;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL60_RS22020;product=5S ribosomal RNA NZ_KK316856.1 cmsearch exon 135799 135911 . + . ID=exon-AL60_RS22020-1;Parent=rna-AL60_RS22020;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL60_RS22020;product=5S ribosomal RNA NZ_KK316856.1 RefSeq gene 136033 136530 . - . ID=gene-AL60_RS22025;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=AL60_RS22025;old_locus_tag=AL60_03368 NZ_KK316856.1 Protein Homology CDS 136033 136530 . - 0 ID=cds-WP_003406857.1;Parent=gene-AL60_RS22025;Dbxref=GenBank:WP_003406857.1;Name=WP_003406857.1;gbkey=CDS;gene=ogt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215832.1;locus_tag=AL60_RS22025;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=WP_003406857.1;transl_table=11 NZ_KK316856.1 RefSeq gene 136527 138017 . - . ID=gene-AL60_RS22030;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=AL60_RS22030;old_locus_tag=AL60_03369 NZ_KK316856.1 Protein Homology CDS 136527 138017 . - 0 ID=cds-WP_003900313.1;Parent=gene-AL60_RS22030;Dbxref=GenBank:WP_003900313.1;Name=WP_003900313.1;gbkey=CDS;gene=alkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215833.1;locus_tag=AL60_RS22030;product=bifunctional regulatory protein/DNA repair enzyme AlkA;protein_id=WP_003900313.1;transl_table=11 NZ_KK316856.1 RefSeq gene 138098 139723 . - . ID=gene-AL60_RS22035;Name=AL60_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22035;old_locus_tag=AL60_03370 NZ_KK316856.1 Protein Homology CDS 138098 139723 . - 0 ID=cds-WP_003906575.1;Parent=gene-AL60_RS22035;Dbxref=GenBank:WP_003906575.1;Name=WP_003906575.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215834.1;locus_tag=AL60_RS22035;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003906575.1;transl_table=11 NZ_KK316856.1 RefSeq pseudogene 139793 140428 . - . ID=gene-AL60_RS0105325;Name=AL60_RS0105325;end_range=140428,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0105325;partial=true;pseudo=true NZ_KK316856.1 Protein Homology CDS 139793 140428 . - 0 ID=cds-AL60_RS0105325;Parent=gene-AL60_RS0105325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;end_range=140428,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215835.1;locus_tag=AL60_RS0105325;partial=true;product=adenylate/guanylate cyclase domain-containing protein;pseudo=true;transl_table=11 NZ_KK316856.1 RefSeq pseudogene 140482 140628 . + . ID=gene-AL60_RS22040;Name=AL60_RS22040;end_range=140628,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS22040;old_locus_tag=AL60_03371;partial=true;pseudo=true NZ_KK316856.1 Protein Homology CDS 140482 140628 . + 0 ID=cds-AL60_RS22040;Parent=gene-AL60_RS22040;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=140628,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS22040;partial=true;product=IS3-like element IS987 family transposase;pseudo=true;transl_table=11 NZ_KK316856.1 RefSeq pseudogene 142472 143437 . - . ID=gene-AL60_RS22045;Name=AL60_RS22045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS22045;old_locus_tag=AL60_03372;partial=true;pseudo=true;start_range=.,142472 NZ_KK316856.1 Protein Homology CDS 142472 143437 . - 0 ID=cds-AL60_RS22045;Parent=gene-AL60_RS22045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009975725.1;locus_tag=AL60_RS22045;partial=true;product=HAMP domain-containing protein;pseudo=true;start_range=.,142472;transl_table=11 NZ_KK316856.1 RefSeq pseudogene 143444 143686 . - . ID=gene-AL60_RS26410;Name=AL60_RS26410;end_range=143686,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26410;old_locus_tag=AL60_03373;partial=true;pseudo=true NZ_KK316856.1 Protein Homology CDS 143444 143686 . - 0 ID=cds-AL60_RS26410;Parent=gene-AL60_RS26410;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=143686,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900315.1;locus_tag=AL60_RS26410;partial=true;product=adenylate/guanylate cyclase domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_KK316857.1 1 137189 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316857.1 RefSeq region 1 137189 . + . ID=NZ_KK316857.1:1..137189;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316857.1 RefSeq pseudogene 1 94 . + . ID=gene-AL60_RS22050;Name=AL60_RS22050;end_range=94,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS22050;old_locus_tag=AL60_03374;partial=true;pseudo=true;start_range=.,1 NZ_KK316857.1 Protein Homology CDS 1 94 . + 1 ID=cds-AL60_RS22050;Parent=gene-AL60_RS22050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=94,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010078638.1;locus_tag=AL60_RS22050;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_KK316857.1 RefSeq gene 137 880 . + . ID=gene-AL60_RS22055;Name=AL60_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22055;old_locus_tag=AL60_03375 NZ_KK316857.1 Protein Homology CDS 137 880 . + 0 ID=cds-WP_031721515.1;Parent=gene-AL60_RS22055;Dbxref=GenBank:WP_031721515.1;Name=WP_031721515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875275.1;locus_tag=AL60_RS22055;product=Clp protease N-terminal domain-containing protein;protein_id=WP_031721515.1;transl_table=11 NZ_KK316857.1 RefSeq gene 959 1480 . + . ID=gene-AL60_RS22060;Name=AL60_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22060;old_locus_tag=AL60_03376 NZ_KK316857.1 Protein Homology CDS 959 1480 . + 0 ID=cds-WP_003899425.1;Parent=gene-AL60_RS22060;Dbxref=GenBank:WP_003899425.1;Name=WP_003899425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217184.1;locus_tag=AL60_RS22060;product=hypothetical protein;protein_id=WP_003899425.1;transl_table=11 NZ_KK316857.1 RefSeq gene 1509 1979 . + . ID=gene-AL60_RS22065;Name=AL60_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22065;old_locus_tag=AL60_03377 NZ_KK316857.1 Protein Homology CDS 1509 1979 . + 0 ID=cds-WP_003413852.1;Parent=gene-AL60_RS22065;Dbxref=GenBank:WP_003413852.1;Name=WP_003413852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217185.1;locus_tag=AL60_RS22065;product=GNAT family N-acetyltransferase;protein_id=WP_003413852.1;transl_table=11 NZ_KK316857.1 RefSeq gene 1957 3066 . - . ID=gene-AL60_RS22070;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=AL60_RS22070;old_locus_tag=AL60_03378 NZ_KK316857.1 Protein Homology CDS 1957 3066 . - 0 ID=cds-WP_003899426.1;Parent=gene-AL60_RS22070;Dbxref=GenBank:WP_003899426.1;Name=WP_003899426.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217186.1;locus_tag=AL60_RS22070;product=cell division protein ZapE;protein_id=WP_003899426.1;transl_table=11 NZ_KK316857.1 RefSeq gene 3065 3841 . + . ID=gene-AL60_RS22075;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AL60_RS22075;old_locus_tag=AL60_03379 NZ_KK316857.1 Protein Homology CDS 3065 3841 . + 0 ID=cds-WP_003413854.1;Parent=gene-AL60_RS22075;Dbxref=GenBank:WP_003413854.1;Name=WP_003413854.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217187.1;locus_tag=AL60_RS22075;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=WP_003413854.1;transl_table=11 NZ_KK316857.1 RefSeq gene 3908 5494 . + . ID=gene-AL60_RS22080;Name=AL60_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22080;old_locus_tag=AL60_03380 NZ_KK316857.1 Protein Homology CDS 3908 5494 . + 0 ID=cds-WP_003899427.1;Parent=gene-AL60_RS22080;Dbxref=GenBank:WP_003899427.1;Name=WP_003899427.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217188.1;locus_tag=AL60_RS22080;product=alpha/beta hydrolase;protein_id=WP_003899427.1;transl_table=11 NZ_KK316857.1 RefSeq gene 5517 6818 . + . ID=gene-AL60_RS22085;Name=aftC;gbkey=Gene;gene=aftC;gene_biotype=protein_coding;locus_tag=AL60_RS22085;old_locus_tag=AL60_03381 NZ_KK316857.1 Protein Homology CDS 5517 6818 . + 0 ID=cds-WP_003413860.1;Parent=gene-AL60_RS22085;Dbxref=GenBank:WP_003413860.1;Name=WP_003413860.1;gbkey=CDS;gene=aftC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217189.1;locus_tag=AL60_RS22085;product=arabinofuranan 3-O-arabinosyltransferase;protein_id=WP_003413860.1;transl_table=11 NZ_KK316857.1 RefSeq gene 6932 7342 . + . ID=gene-AL60_RS22090;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=AL60_RS22090;old_locus_tag=AL60_03382 NZ_KK316857.1 Protein Homology CDS 6932 7342 . + 0 ID=cds-WP_003413865.1;Parent=gene-AL60_RS22090;Dbxref=GenBank:WP_003413865.1;Name=WP_003413865.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217190.1;locus_tag=AL60_RS22090;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_003413865.1;transl_table=11 NZ_KK316857.1 RefSeq gene 7410 8162 . - . ID=gene-AL60_RS22095;Name=AL60_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22095;old_locus_tag=AL60_03383 NZ_KK316857.1 Protein Homology CDS 7410 8162 . - 0 ID=cds-WP_003413866.1;Parent=gene-AL60_RS22095;Dbxref=GenBank:WP_003413866.1;Name=WP_003413866.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217191.1;locus_tag=AL60_RS22095;product=class I SAM-dependent methyltransferase;protein_id=WP_003413866.1;transl_table=11 NZ_KK316857.1 RefSeq gene 8159 8854 . - . ID=gene-AL60_RS22100;Name=hemQ;gbkey=Gene;gene=hemQ;gene_biotype=protein_coding;locus_tag=AL60_RS22100;old_locus_tag=AL60_03384 NZ_KK316857.1 Protein Homology CDS 8159 8854 . - 0 ID=cds-WP_003413869.1;Parent=gene-AL60_RS22100;Dbxref=GenBank:WP_003413869.1;Name=WP_003413869.1;gbkey=CDS;gene=hemQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217192.1;locus_tag=AL60_RS22100;product=hydrogen peroxide-dependent heme synthase;protein_id=WP_003413869.1;transl_table=11 NZ_KK316857.1 RefSeq gene 8860 10218 . - . ID=gene-AL60_RS22105;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=AL60_RS22105;old_locus_tag=AL60_03385 NZ_KK316857.1 Protein Homology CDS 8860 10218 . - 0 ID=cds-WP_003413871.1;Parent=gene-AL60_RS22105;Dbxref=GenBank:WP_003413871.1;Name=WP_003413871.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=oxygen-dependent protoporphyrinogen oxidase activity|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177675.1;locus_tag=AL60_RS22105;product=protoporphyrinogen oxidase;protein_id=WP_003413871.1;transl_table=11 NZ_KK316857.1 RefSeq gene 10215 11288 . - . ID=gene-AL60_RS22110;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AL60_RS22110;old_locus_tag=AL60_03386 NZ_KK316857.1 Protein Homology CDS 10215 11288 . - 0 ID=cds-WP_003413873.1;Parent=gene-AL60_RS22110;Dbxref=GenBank:WP_003413873.1;Name=WP_003413873.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217194.1;locus_tag=AL60_RS22110;product=uroporphyrinogen decarboxylase;protein_id=WP_003413873.1;transl_table=11 NZ_KK316857.1 RefSeq gene 11341 12171 . + . ID=gene-AL60_RS22115;Name=AL60_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22115;old_locus_tag=AL60_03387 NZ_KK316857.1 Protein Homology CDS 11341 12171 . + 0 ID=cds-WP_003413876.1;Parent=gene-AL60_RS22115;Dbxref=GenBank:WP_003413876.1;Name=WP_003413876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217195.1;locus_tag=AL60_RS22115;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_003413876.1;transl_table=11 NZ_KK316857.1 RefSeq gene 12331 12963 . + . ID=gene-AL60_RS22120;Name=AL60_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22120;old_locus_tag=AL60_03388 NZ_KK316857.1 Protein Homology CDS 12331 12963 . + 0 ID=cds-WP_003413879.1;Parent=gene-AL60_RS22120;Dbxref=GenBank:WP_003413879.1;Name=WP_003413879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217196.1;locus_tag=AL60_RS22120;product=DUF3000 domain-containing protein;protein_id=WP_003413879.1;transl_table=11 NZ_KK316857.1 RefSeq gene 12965 14281 . + . ID=gene-AL60_RS22125;Name=AL60_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22125;old_locus_tag=AL60_03389 NZ_KK316857.1 Protein Homology CDS 12965 14281 . + 0 ID=cds-WP_003413889.1;Parent=gene-AL60_RS22125;Dbxref=GenBank:WP_003413889.1;Name=WP_003413889.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217197.1;locus_tag=AL60_RS22125;product=ribonuclease D;protein_id=WP_003413889.1;transl_table=11 NZ_KK316857.1 RefSeq gene 14278 16194 . - . ID=gene-AL60_RS22130;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AL60_RS22130;old_locus_tag=AL60_03390 NZ_KK316857.1 Protein Homology CDS 14278 16194 . - 0 ID=cds-WP_003413891.1;Parent=gene-AL60_RS22130;Dbxref=GenBank:WP_003413891.1;Name=WP_003413891.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177898.1;locus_tag=AL60_RS22130;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_003413891.1;transl_table=11 NZ_KK316857.1 RefSeq gene 16392 16835 . + . ID=gene-AL60_RS22135;Name=AL60_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22135;old_locus_tag=AL60_03391 NZ_KK316857.1 Protein Homology CDS 16392 16835 . + 0 ID=cds-WP_003912830.1;Parent=gene-AL60_RS22135;Dbxref=GenBank:WP_003912830.1;Name=WP_003912830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008258518.1;locus_tag=AL60_RS22135;product=CBS domain-containing protein;protein_id=WP_003912830.1;transl_table=11 NZ_KK316857.1 RefSeq gene 16840 18129 . + . ID=gene-AL60_RS22140;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=AL60_RS22140;old_locus_tag=AL60_03392 NZ_KK316857.1 Protein Homology CDS 16840 18129 . + 0 ID=cds-WP_003413894.1;Parent=gene-AL60_RS22140;Dbxref=GenBank:WP_003413894.1;Name=WP_003413894.1;gbkey=CDS;gene=arsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217200.1;locus_tag=AL60_RS22140;product=ArsB/NhaD family transporter;protein_id=WP_003413894.1;transl_table=11 NZ_KK316857.1 RefSeq gene 18209 19495 . + . ID=gene-AL60_RS22145;Name=AL60_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22145;old_locus_tag=AL60_03393 NZ_KK316857.1 Protein Homology CDS 18209 19495 . + 0 ID=cds-WP_003899431.1;Parent=gene-AL60_RS22145;Dbxref=GenBank:WP_003899431.1;Name=WP_003899431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177899.1;locus_tag=AL60_RS22145;product=ArsB/NhaD family transporter;protein_id=WP_003899431.1;transl_table=11 NZ_KK316857.1 RefSeq gene 19506 20264 . - . ID=gene-AL60_RS22150;Name=AL60_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22150;old_locus_tag=AL60_03394 NZ_KK316857.1 Protein Homology CDS 19506 20264 . - 0 ID=cds-WP_003413897.1;Parent=gene-AL60_RS22150;Dbxref=GenBank:WP_003413897.1;Name=WP_003413897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217202.1;locus_tag=AL60_RS22150;product=fluoroquinolones efflux ABC transporter permease;protein_id=WP_003413897.1;transl_table=11 NZ_KK316857.1 RefSeq gene 20261 20974 . - . ID=gene-AL60_RS22155;Name=AL60_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22155;old_locus_tag=AL60_03395 NZ_KK316857.1 Protein Homology CDS 20261 20974 . - 0 ID=cds-WP_003413912.1;Parent=gene-AL60_RS22155;Dbxref=GenBank:WP_003413912.1;Name=WP_003413912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217203.1;locus_tag=AL60_RS22155;product=fluoroquinolone export ABC transporter permease subunit;protein_id=WP_003413912.1;transl_table=11 NZ_KK316857.1 RefSeq gene 20971 21876 . - . ID=gene-AL60_RS22160;Name=AL60_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22160;old_locus_tag=AL60_03396 NZ_KK316857.1 Protein Homology CDS 20971 21876 . - 0 ID=cds-WP_003413913.1;Parent=gene-AL60_RS22160;Dbxref=GenBank:WP_003413913.1;Name=WP_003413913.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217204.1;locus_tag=AL60_RS22160;product=ABC transporter ATP-binding protein;protein_id=WP_003413913.1;transl_table=11 NZ_KK316857.1 RefSeq gene 22071 23288 . - . ID=gene-AL60_RS22165;Name=AL60_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22165;old_locus_tag=AL60_03397 NZ_KK316857.1 Protein Homology CDS 22071 23288 . - 0 ID=cds-WP_003900550.1;Parent=gene-AL60_RS22165;Dbxref=GenBank:WP_003900550.1;Name=WP_003900550.1;Ontology_term=GO:0001510,GO:0008757,GO:0046872,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,metal ion binding|0046872||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217205.1;locus_tag=AL60_RS22165;product=class I SAM-dependent RNA methyltransferase;protein_id=WP_003900550.1;transl_table=11 NZ_KK316857.1 RefSeq gene 23462 25435 . - . ID=gene-AL60_RS22170;Name=AL60_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22170;old_locus_tag=AL60_03398 NZ_KK316857.1 Protein Homology CDS 23462 25435 . - 0 ID=cds-WP_012054326.1;Parent=gene-AL60_RS22170;Dbxref=GenBank:WP_012054326.1;Name=WP_012054326.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217206.1;locus_tag=AL60_RS22170;product=APC family permease;protein_id=WP_012054326.1;transl_table=11 NZ_KK316857.1 RefSeq gene 25570 26253 . + . ID=gene-AL60_RS22175;Name=ceoB;gbkey=Gene;gene=ceoB;gene_biotype=protein_coding;locus_tag=AL60_RS22175;old_locus_tag=AL60_03399 NZ_KK316857.1 Protein Homology CDS 25570 26253 . + 0 ID=cds-WP_003413919.1;Parent=gene-AL60_RS22175;Dbxref=GenBank:WP_003413919.1;Name=WP_003413919.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;gene=ceoB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177900.1;locus_tag=AL60_RS22175;product=potassium channel family protein;protein_id=WP_003413919.1;transl_table=11 NZ_KK316857.1 RefSeq gene 26250 26912 . + . ID=gene-AL60_RS22180;Name=ceoC;gbkey=Gene;gene=ceoC;gene_biotype=protein_coding;locus_tag=AL60_RS22180;old_locus_tag=AL60_03400 NZ_KK316857.1 Protein Homology CDS 26250 26912 . + 0 ID=cds-WP_003899435.1;Parent=gene-AL60_RS22180;Dbxref=GenBank:WP_003899435.1;Name=WP_003899435.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;gene=ceoC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177901.1;locus_tag=AL60_RS22180;product=potassium channel family protein;protein_id=WP_003899435.1;transl_table=11 NZ_KK316857.1 RefSeq gene 26923 27594 . - . ID=gene-AL60_RS22185;Name=AL60_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22185;old_locus_tag=AL60_03401 NZ_KK316857.1 Protein Homology CDS 26923 27594 . - 0 ID=cds-WP_003413925.1;Parent=gene-AL60_RS22185;Dbxref=GenBank:WP_003413925.1;Name=WP_003413925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217209.1;locus_tag=AL60_RS22185;product=DUF3159 domain-containing protein;protein_id=WP_003413925.1;transl_table=11 NZ_KK316857.1 RefSeq gene 27625 27993 . - . ID=gene-AL60_RS22190;Name=AL60_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22190;old_locus_tag=AL60_03402 NZ_KK316857.1 Protein Homology CDS 27625 27993 . - 0 ID=cds-WP_003901453.1;Parent=gene-AL60_RS22190;Dbxref=GenBank:WP_003901453.1;Name=WP_003901453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217210.1;locus_tag=AL60_RS22190;product=OB-fold nucleic acid binding domain-containing protein;protein_id=WP_003901453.1;transl_table=11 NZ_KK316857.1 RefSeq gene 28142 28849 . + . ID=gene-AL60_RS22195;Name=AL60_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22195;old_locus_tag=AL60_03403 NZ_KK316857.1 Protein Homology CDS 28142 28849 . + 0 ID=cds-WP_003413927.1;Parent=gene-AL60_RS22195;Dbxref=GenBank:WP_003413927.1;Name=WP_003413927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217211.1;locus_tag=AL60_RS22195;product=alpha/beta fold hydrolase;protein_id=WP_003413927.1;transl_table=11 NZ_KK316857.1 RefSeq gene 29055 29834 . - . ID=gene-AL60_RS22200;Name=AL60_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22200;old_locus_tag=AL60_03404 NZ_KK316857.1 Protein Homology CDS 29055 29834 . - 0 ID=cds-WP_003413928.1;Parent=gene-AL60_RS22200;Dbxref=GenBank:WP_003413928.1;Name=WP_003413928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217212.1;locus_tag=AL60_RS22200;product=DUF3710 domain-containing protein;protein_id=WP_003413928.1;transl_table=11 NZ_KK316857.1 RefSeq gene 29909 30373 . - . ID=gene-AL60_RS22205;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AL60_RS22205;old_locus_tag=AL60_03405 NZ_KK316857.1 Protein Homology CDS 29909 30373 . - 0 ID=cds-WP_003413930.1;Parent=gene-AL60_RS22205;Dbxref=GenBank:WP_003413930.1;Name=WP_003413930.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908085.1;locus_tag=AL60_RS22205;product=dUTP diphosphatase;protein_id=WP_003413930.1;transl_table=11 NZ_KK316857.1 RefSeq gene 30399 30884 . + . ID=gene-AL60_RS22210;Name=AL60_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22210;old_locus_tag=AL60_03406 NZ_KK316857.1 Protein Homology CDS 30399 30884 . + 0 ID=cds-WP_003413931.1;Parent=gene-AL60_RS22210;Dbxref=GenBank:WP_003413931.1;Name=WP_003413931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217214.1;locus_tag=AL60_RS22210;product=DUF3093 domain-containing protein;protein_id=WP_003413931.1;transl_table=11 NZ_KK316857.1 RefSeq gene 30889 31191 . - . ID=gene-AL60_RS22215;Name=AL60_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22215;old_locus_tag=AL60_03407 NZ_KK316857.1 Protein Homology CDS 30889 31191 . - 0 ID=cds-WP_003899437.1;Parent=gene-AL60_RS22215;Dbxref=GenBank:WP_003899437.1;Name=WP_003899437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217215.1;locus_tag=AL60_RS22215;product=DUF4193 domain-containing protein;protein_id=WP_003899437.1;transl_table=11 NZ_KK316857.1 RefSeq gene 31429 32079 . + . ID=gene-AL60_RS22220;Name=cei;gbkey=Gene;gene=cei;gene_biotype=protein_coding;locus_tag=AL60_RS22220;old_locus_tag=AL60_03408 NZ_KK316857.1 Protein Homology CDS 31429 32079 . + 0 ID=cds-WP_003413937.1;Parent=gene-AL60_RS22220;Dbxref=GenBank:WP_003413937.1;Name=WP_003413937.1;gbkey=CDS;gene=cei;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217216.1;locus_tag=AL60_RS22220;product=envelope integrity protein Cei;protein_id=WP_003413937.1;transl_table=11 NZ_KK316857.1 RefSeq gene 32089 32961 . - . ID=gene-AL60_RS22225;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=AL60_RS22225;old_locus_tag=AL60_03409 NZ_KK316857.1 Protein Homology CDS 32089 32961 . - 0 ID=cds-WP_003413939.1;Parent=gene-AL60_RS22225;Dbxref=GenBank:WP_003413939.1;Name=WP_003413939.1;gbkey=CDS;gene=suhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217217.1;locus_tag=AL60_RS22225;product=inositol-1-monophosphatase SuhB;protein_id=WP_003413939.1;transl_table=11 NZ_KK316857.1 RefSeq gene 33084 33881 . + . ID=gene-AL60_RS22230;Name=ppgK;gbkey=Gene;gene=ppgK;gene_biotype=protein_coding;locus_tag=AL60_RS22230;old_locus_tag=AL60_03410 NZ_KK316857.1 Protein Homology CDS 33084 33881 . + 0 ID=cds-WP_003413941.1;Parent=gene-AL60_RS22230;Dbxref=GenBank:WP_003413941.1;Name=WP_003413941.1;Ontology_term=GO:0004340,GO:0047330;gbkey=CDS;gene=ppgK;go_function=glucokinase activity|0004340||IEA,polyphosphate-glucose phosphotransferase activity|0047330||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217218.1;locus_tag=AL60_RS22230;product=polyphosphate--glucose phosphotransferase;protein_id=WP_003413941.1;transl_table=11 NZ_KK316857.1 RefSeq gene 34061 35647 . + . ID=gene-AL60_RS22235;Name=sigA;gbkey=Gene;gene=sigA;gene_biotype=protein_coding;locus_tag=AL60_RS22235;old_locus_tag=AL60_03411 NZ_KK316857.1 Protein Homology CDS 34061 35647 . + 0 ID=cds-WP_003413944.1;Parent=gene-AL60_RS22235;Dbxref=GenBank:WP_003413944.1;Name=WP_003413944.1;Ontology_term=GO:0006352,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=sigA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217219.1;locus_tag=AL60_RS22235;product=RNA polymerase sigma factor;protein_id=WP_003413944.1;transl_table=11 NZ_KK316857.1 RefSeq gene 35684 36112 . + . ID=gene-AL60_RS22240;Name=AL60_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22240;old_locus_tag=AL60_03412 NZ_KK316857.1 Protein Homology CDS 35684 36112 . + 0 ID=cds-WP_003899440.1;Parent=gene-AL60_RS22240;Dbxref=GenBank:WP_003899440.1;Name=WP_003899440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217220.1;locus_tag=AL60_RS22240;product=RidA family protein;protein_id=WP_003899440.1;transl_table=11 NZ_KK316857.1 RefSeq gene 36040 36429 . - . ID=gene-AL60_RS22245;Name=AL60_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22245;old_locus_tag=AL60_03413 NZ_KK316857.1 Protein Homology CDS 36040 36429 . - 0 ID=cds-WP_003413947.1;Parent=gene-AL60_RS22245;Dbxref=GenBank:WP_003413947.1;Name=WP_003413947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217221.1;locus_tag=AL60_RS22245;product=DUF952 domain-containing protein;protein_id=WP_003413947.1;transl_table=11 NZ_KK316857.1 RefSeq gene 36426 36668 . - . ID=gene-AL60_RS26430;Name=AL60_RS26430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26430;old_locus_tag=AL60_03414 NZ_KK316857.1 Protein Homology CDS 36426 36668 . - 0 ID=cds-WP_049955294.1;Parent=gene-AL60_RS26430;Dbxref=GenBank:WP_049955294.1;Name=WP_049955294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217222.1;locus_tag=AL60_RS26430;product=hypothetical protein;protein_id=WP_049955294.1;transl_table=11 NZ_KK316857.1 RefSeq gene 36621 36737 . + . ID=gene-AL60_RS28190;Name=AL60_RS28190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28190 NZ_KK316857.1 Protein Homology CDS 36621 36737 . + 0 ID=cds-WP_015456423.1;Parent=gene-AL60_RS28190;Dbxref=GenBank:WP_015456423.1;Name=WP_015456423.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048765.1;locus_tag=AL60_RS28190;product=DUF7455 domain-containing protein;protein_id=WP_015456423.1;transl_table=11 NZ_KK316857.1 RefSeq gene 36799 37773 . + . ID=gene-AL60_RS22250;Name=AL60_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22250;old_locus_tag=AL60_03415 NZ_KK316857.1 Protein Homology CDS 36799 37773 . + 0 ID=cds-WP_003413953.1;Parent=gene-AL60_RS22250;Dbxref=GenBank:WP_003413953.1;Name=WP_003413953.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217223.1;locus_tag=AL60_RS22250;product=YihY/virulence factor BrkB family protein;protein_id=WP_003413953.1;transl_table=11 NZ_KK316857.1 RefSeq gene 37774 38013 . - . ID=gene-AL60_RS22255;Name=AL60_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22255;old_locus_tag=AL60_03416 NZ_KK316857.1 Protein Homology CDS 37774 38013 . - 0 ID=cds-WP_003413954.1;Parent=gene-AL60_RS22255;Dbxref=GenBank:WP_003413954.1;Name=WP_003413954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008258553.1;locus_tag=AL60_RS22255;product=DUF3039 domain-containing protein;protein_id=WP_003413954.1;transl_table=11 NZ_KK316857.1 RefSeq gene 38065 38511 . + . ID=gene-AL60_RS22260;Name=AL60_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22260;old_locus_tag=AL60_03417 NZ_KK316857.1 Protein Homology CDS 38065 38511 . + 0 ID=cds-WP_003899442.1;Parent=gene-AL60_RS22260;Dbxref=GenBank:WP_003899442.1;Name=WP_003899442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217225.1;locus_tag=AL60_RS22260;product=DUF3099 domain-containing protein;protein_id=WP_003899442.1;transl_table=11 NZ_KK316857.1 RefSeq gene 38687 39658 . + . ID=gene-AL60_RS22265;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=AL60_RS22265;old_locus_tag=AL60_03418 NZ_KK316857.1 Protein Homology CDS 38687 39658 . + 0 ID=cds-WP_003413958.1;Parent=gene-AL60_RS22265;Dbxref=GenBank:WP_003413958.1;Name=WP_003413958.1;gbkey=CDS;gene=sigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217226.1;locus_tag=AL60_RS22265;product=sigma-70 family RNA polymerase sigma factor SigB;protein_id=WP_003413958.1;transl_table=11 NZ_KK316857.1 RefSeq gene 39791 40483 . + . ID=gene-AL60_RS22270;Name=ideR;gbkey=Gene;gene=ideR;gene_biotype=protein_coding;locus_tag=AL60_RS22270;old_locus_tag=AL60_03419 NZ_KK316857.1 Protein Homology CDS 39791 40483 . + 0 ID=cds-WP_003413962.1;Parent=gene-AL60_RS22270;Dbxref=GenBank:WP_003413962.1;Name=WP_003413962.1;gbkey=CDS;gene=ideR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217227.1;locus_tag=AL60_RS22270;product=iron-dependent transcriptional regulator IdeR;protein_id=WP_003413962.1;transl_table=11 NZ_KK316857.1 RefSeq gene 40496 41554 . - . ID=gene-AL60_RS22275;Name=AL60_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22275;old_locus_tag=AL60_03420 NZ_KK316857.1 Protein Homology CDS 40496 41554 . - 0 ID=cds-WP_003413965.1;Parent=gene-AL60_RS22275;Dbxref=GenBank:WP_003413965.1;Name=WP_003413965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217228.1;locus_tag=AL60_RS22275;product=DUF4192 domain-containing protein;protein_id=WP_003413965.1;transl_table=11 NZ_KK316857.1 RefSeq gene 41667 43073 . + . ID=gene-AL60_RS22280;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=AL60_RS22280;old_locus_tag=AL60_03421 NZ_KK316857.1 Protein Homology CDS 41667 43073 . + 0 ID=cds-WP_003900556.1;Parent=gene-AL60_RS22280;Dbxref=GenBank:WP_003900556.1;Name=WP_003900556.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217229.1;locus_tag=AL60_RS22280;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_003900556.1;transl_table=11 NZ_KK316857.1 RefSeq gene 43291 44265 . + . ID=gene-AL60_RS22285;Name=AL60_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22285;old_locus_tag=AL60_03422 NZ_KK316857.1 Protein Homology CDS 43291 44265 . + 0 ID=cds-WP_003900557.1;Parent=gene-AL60_RS22285;Dbxref=GenBank:WP_003900557.1;Name=WP_003900557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217230.1;locus_tag=AL60_RS22285;product=proteasome assembly chaperone family protein;protein_id=WP_003900557.1;transl_table=11 NZ_KK316857.1 RefSeq gene 44324 45349 . + . ID=gene-AL60_RS22290;Name=AL60_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22290;old_locus_tag=AL60_03423 NZ_KK316857.1 Protein Homology CDS 44324 45349 . + 0 ID=cds-WP_003900558.1;Parent=gene-AL60_RS22290;Dbxref=GenBank:WP_003900558.1;Name=WP_003900558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217231.1;locus_tag=AL60_RS22290;product=alpha/beta fold hydrolase;protein_id=WP_003900558.1;transl_table=11 NZ_KK316857.1 RefSeq gene 45398 46084 . + . ID=gene-AL60_RS22295;Name=AL60_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22295;old_locus_tag=AL60_03424 NZ_KK316857.1 Protein Homology CDS 45398 46084 . + 0 ID=cds-WP_003413971.1;Parent=gene-AL60_RS22295;Dbxref=GenBank:WP_003413971.1;Name=WP_003413971.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217232.1;locus_tag=AL60_RS22295;product=PhzF family phenazine biosynthesis protein;protein_id=WP_003413971.1;transl_table=11 NZ_KK316857.1 RefSeq gene 46093 46587 . - . ID=gene-AL60_RS22300;Name=AL60_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22300;old_locus_tag=AL60_03425 NZ_KK316857.1 Protein Homology CDS 46093 46587 . - 0 ID=cds-WP_003900559.1;Parent=gene-AL60_RS22300;Dbxref=GenBank:WP_003900559.1;Name=WP_003900559.1;Ontology_term=GO:0020037,GO:0046872,GO:0062213;gbkey=CDS;go_function=heme binding|0020037||IEA,metal ion binding|0046872||IEA,peroxynitrite isomerase activity|0062213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217233.1;locus_tag=AL60_RS22300;product=peroxynitrite isomerase;protein_id=WP_003900559.1;transl_table=11 NZ_KK316857.1 RefSeq gene 46639 47103 . - . ID=gene-AL60_RS22305;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=AL60_RS22305;old_locus_tag=AL60_03426 NZ_KK316857.1 Protein Homology CDS 46639 47103 . - 0 ID=cds-WP_003413973.1;Parent=gene-AL60_RS22305;Dbxref=GenBank:WP_003413973.1;Name=WP_003413973.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217234.1;locus_tag=AL60_RS22305;product=transcriptional regulator NrdR;protein_id=WP_003413973.1;transl_table=11 NZ_KK316857.1 RefSeq gene 47266 47763 . - . ID=gene-AL60_RS22310;Name=chiZ;gbkey=Gene;gene=chiZ;gene_biotype=protein_coding;locus_tag=AL60_RS22310;old_locus_tag=AL60_03427 NZ_KK316857.1 Protein Homology CDS 47266 47763 . - 0 ID=cds-WP_003899446.1;Parent=gene-AL60_RS22310;Dbxref=GenBank:WP_003899446.1;Name=WP_003899446.1;gbkey=CDS;gene=chiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217235.1;locus_tag=AL60_RS22310;product=cell wall hydrolase ChiZ;protein_id=WP_003899446.1;transl_table=11 NZ_KK316857.1 RefSeq gene 48014 48724 . + . ID=gene-AL60_RS22315;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=AL60_RS22315;old_locus_tag=AL60_03428 NZ_KK316857.1 Protein Homology CDS 48014 48724 . + 0 ID=cds-WP_003899448.1;Parent=gene-AL60_RS22315;Dbxref=GenBank:WP_003899448.1;Name=WP_003899448.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217236.2;locus_tag=AL60_RS22315;product=transcriptional repressor LexA;protein_id=WP_003899448.1;transl_table=11 NZ_KK316857.1 RefSeq gene 48746 50845 . - . ID=gene-AL60_RS22320;Name=AL60_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22320;old_locus_tag=AL60_03429 NZ_KK316857.1 Protein Homology CDS 48746 50845 . - 0 ID=cds-WP_003900560.1;Parent=gene-AL60_RS22320;Dbxref=GenBank:WP_003900560.1;Name=WP_003900560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217237.1;locus_tag=AL60_RS22320;product=LGFP repeat-containing protein;protein_id=WP_003900560.1;transl_table=11 NZ_KK316857.1 RefSeq gene 50861 51109 . + . ID=gene-AL60_RS22325;Name=AL60_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22325;old_locus_tag=AL60_03430 NZ_KK316857.1 Protein Homology CDS 50861 51109 . + 0 ID=cds-WP_003902343.1;Parent=gene-AL60_RS22325;Dbxref=GenBank:WP_003902343.1;Name=WP_003902343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217238.1;locus_tag=AL60_RS22325;product=hypothetical protein;protein_id=WP_003902343.1;transl_table=11 NZ_KK316857.1 RefSeq gene 51135 52328 . + . ID=gene-AL60_RS22330;Name=AL60_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22330;old_locus_tag=AL60_03431 NZ_KK316857.1 Protein Homology CDS 51135 52328 . + 0 ID=cds-WP_003413979.1;Parent=gene-AL60_RS22330;Dbxref=GenBank:WP_003413979.1;Name=WP_003413979.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217239.1;locus_tag=AL60_RS22330;product=TerC/Alx family metal homeostasis membrane protein;protein_id=WP_003413979.1;transl_table=11 NZ_KK316857.1 RefSeq gene 52357 53517 . - . ID=gene-AL60_RS22335;Name=AL60_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22335;old_locus_tag=AL60_03432 NZ_KK316857.1 Protein Homology CDS 52357 53517 . - 0 ID=cds-WP_003413981.1;Parent=gene-AL60_RS22335;Dbxref=GenBank:WP_003413981.1;Name=WP_003413981.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217240.1;locus_tag=AL60_RS22335;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003413981.1;transl_table=11 NZ_KK316857.1 RefSeq gene 53653 55083 . - . ID=gene-AL60_RS22340;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=AL60_RS22340;old_locus_tag=AL60_03433 NZ_KK316857.1 Protein Homology CDS 53653 55083 . - 0 ID=cds-WP_003911950.1;Parent=gene-AL60_RS22340;Dbxref=GenBank:WP_003911950.1;Name=WP_003911950.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911950.1;locus_tag=AL60_RS22340;product=GTPase HflX;protein_id=WP_003911950.1;transl_table=11 NZ_KK316857.1 RefSeq gene 55157 56026 . - . ID=gene-AL60_RS22345;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AL60_RS22345;old_locus_tag=AL60_03434 NZ_KK316857.1 Protein Homology CDS 55157 56026 . - 0 ID=cds-WP_003413987.1;Parent=gene-AL60_RS22345;Dbxref=GenBank:WP_003413987.1;Name=WP_003413987.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217242.1;locus_tag=AL60_RS22345;product=diaminopimelate epimerase;protein_id=WP_003413987.1;transl_table=11 NZ_KK316857.1 RefSeq gene 56051 56995 . - . ID=gene-AL60_RS22350;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AL60_RS22350;old_locus_tag=AL60_03435 NZ_KK316857.1 Protein Homology CDS 56051 56995 . - 0 ID=cds-WP_003413989.1;Parent=gene-AL60_RS22350;Dbxref=GenBank:WP_003413989.1;Name=WP_003413989.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217243.1;locus_tag=AL60_RS22350;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_003413989.1;transl_table=11 NZ_KK316857.1 RefSeq gene 56992 57687 . - . ID=gene-AL60_RS22355;Name=AL60_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22355;old_locus_tag=AL60_03436 NZ_KK316857.1 Protein Homology CDS 56992 57687 . - 0 ID=cds-WP_003899452.1;Parent=gene-AL60_RS22355;Dbxref=GenBank:WP_003899452.1;Name=WP_003899452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217244.1;locus_tag=AL60_RS22355;product=class III extradiol ring-cleavage dioxygenase family protein;protein_id=WP_003899452.1;transl_table=11 NZ_KK316857.1 RefSeq gene 57796 58701 . - . ID=gene-AL60_RS22360;Name=AL60_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22360;old_locus_tag=AL60_03437 NZ_KK316857.1 Protein Homology CDS 57796 58701 . - 0 ID=cds-WP_003413995.1;Parent=gene-AL60_RS22360;Dbxref=GenBank:WP_003413995.1;Name=WP_003413995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217245.1;locus_tag=AL60_RS22360;product=DMT family transporter;protein_id=WP_003413995.1;transl_table=11 NZ_KK316857.1 RefSeq gene 58768 59244 . + . ID=gene-AL60_RS22365;Name=AL60_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22365;old_locus_tag=AL60_03438 NZ_KK316857.1 Protein Homology CDS 58768 59244 . + 0 ID=cds-WP_003901458.1;Parent=gene-AL60_RS22365;Dbxref=GenBank:WP_003901458.1;Name=WP_003901458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217246.1;locus_tag=AL60_RS22365;product=hypothetical protein;protein_id=WP_003901458.1;transl_table=11 NZ_KK316857.1 RefSeq gene 59252 60604 . + . ID=gene-AL60_RS22370;Name=AL60_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22370;old_locus_tag=AL60_03439 NZ_KK316857.1 Protein Homology CDS 59252 60604 . + 0 ID=cds-WP_003413997.1;Parent=gene-AL60_RS22370;Dbxref=GenBank:WP_003413997.1;Name=WP_003413997.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217247.1;locus_tag=AL60_RS22370;product=DUF349 domain-containing protein;protein_id=WP_003413997.1;transl_table=11 NZ_KK316857.1 RefSeq gene 60601 61215 . - . ID=gene-AL60_RS22375;Name=AL60_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22375;old_locus_tag=AL60_03440 NZ_KK316857.1 Protein Homology CDS 60601 61215 . - 0 ID=cds-WP_003413999.1;Parent=gene-AL60_RS22375;Dbxref=GenBank:WP_003413999.1;Name=WP_003413999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217248.1;locus_tag=AL60_RS22375;product=Rv2732c family membrane protein;protein_id=WP_003413999.1;transl_table=11 NZ_KK316857.1 RefSeq gene 61212 62750 . - . ID=gene-AL60_RS22380;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AL60_RS22380;old_locus_tag=AL60_03441 NZ_KK316857.1 Protein Homology CDS 61212 62750 . - 0 ID=cds-WP_003414001.1;Parent=gene-AL60_RS22380;Dbxref=GenBank:WP_003414001.1;Name=WP_003414001.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217249.1;locus_tag=AL60_RS22380;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_003414001.1;transl_table=11 NZ_KK316857.1 RefSeq gene 63047 63901 . + . ID=gene-AL60_RS26440;Name=AL60_RS26440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26440;old_locus_tag=AL60_03442 NZ_KK316857.1 Protein Homology CDS 63047 63901 . + 0 ID=cds-WP_003899455.1;Parent=gene-AL60_RS26440;Dbxref=GenBank:WP_003899455.1;Name=WP_003899455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217250.1;locus_tag=AL60_RS26440;product=DUF5131 family protein;protein_id=WP_003899455.1;transl_table=11 NZ_KK316857.1 RefSeq gene 63786 64778 . - . ID=gene-AL60_RS22385;Name=AL60_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22385;old_locus_tag=AL60_03443 NZ_KK316857.1 Protein Homology CDS 63786 64778 . - 0 ID=cds-WP_003899456.1;Parent=gene-AL60_RS22385;Dbxref=GenBank:WP_003899456.1;Name=WP_003899456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217251.1;locus_tag=AL60_RS22385;product=three-Cys-motif partner protein TcmP;protein_id=WP_003899456.1;transl_table=11 NZ_KK316857.1 RefSeq gene 64788 65312 . - . ID=gene-AL60_RS22390;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AL60_RS22390;old_locus_tag=AL60_03444 NZ_KK316857.1 Protein Homology CDS 64788 65312 . - 0 ID=cds-WP_003900562.1;Parent=gene-AL60_RS22390;Dbxref=GenBank:WP_003900562.1;Name=WP_003900562.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217252.1;locus_tag=AL60_RS22390;product=recombination regulator RecX;protein_id=WP_003900562.1;transl_table=11 NZ_KK316857.1 RefSeq gene 65278 67650 . - . ID=gene-AL60_RS22395;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AL60_RS22395;old_locus_tag=AL60_03445 NZ_KK316857.1 Protein Homology CDS 65278 67650 . - 0 ID=cds-WP_003414006.1;Parent=gene-AL60_RS22395;Dbxref=GenBank:WP_003414006.1;Name=WP_003414006.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217253.1;locus_tag=AL60_RS22395;product=intein-containing recombinase RecA;protein_id=WP_003414006.1;transl_table=11 NZ_KK316857.1 RefSeq gene 67845 68018 . + . ID=gene-AL60_RS22400;Name=AL60_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22400;old_locus_tag=AL60_03446 NZ_KK316857.1 Protein Homology CDS 67845 68018 . + 0 ID=cds-WP_003414008.1;Parent=gene-AL60_RS22400;Dbxref=GenBank:WP_003414008.1;Name=WP_003414008.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414008.1;locus_tag=AL60_RS22400;product=(2Fe-2S)-binding protein;protein_id=WP_003414008.1;transl_table=11 NZ_KK316857.1 RefSeq gene 68032 68226 . - . ID=gene-AL60_RS22405;Name=AL60_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22405;old_locus_tag=AL60_03447 NZ_KK316857.1 Protein Homology CDS 68032 68226 . - 0 ID=cds-WP_031680673.1;Parent=gene-AL60_RS22405;Dbxref=GenBank:WP_031680673.1;Name=WP_031680673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019513025.1;locus_tag=AL60_RS22405;product=DUF3046 domain-containing protein;protein_id=WP_031680673.1;transl_table=11 NZ_KK316857.1 RefSeq gene 68249 69415 . - . ID=gene-AL60_RS22410;Name=AL60_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22410;old_locus_tag=AL60_03448 NZ_KK316857.1 Protein Homology CDS 68249 69415 . - 0 ID=cds-WP_003901461.1;Parent=gene-AL60_RS22410;Dbxref=GenBank:WP_003901461.1;Name=WP_003901461.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217255.1;locus_tag=AL60_RS22410;product=glycosyltransferase;protein_id=WP_003901461.1;transl_table=11 NZ_KK316857.1 RefSeq gene 69459 69908 . + . ID=gene-AL60_RS22415;Name=ephG;gbkey=Gene;gene=ephG;gene_biotype=protein_coding;locus_tag=AL60_RS22415;old_locus_tag=AL60_03449 NZ_KK316857.1 Protein Homology CDS 69459 69908 . + 0 ID=cds-WP_003414015.1;Parent=gene-AL60_RS22415;Dbxref=GenBank:WP_003414015.1;Name=WP_003414015.1;gbkey=CDS;gene=ephG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217256.1;locus_tag=AL60_RS22415;product=epoxide hydrolase;protein_id=WP_003414015.1;transl_table=11 NZ_KK316857.1 RefSeq gene 70140 71717 . + . ID=gene-AL60_RS22420;Name=AL60_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22420;old_locus_tag=AL60_03450 NZ_KK316857.1 Protein Homology CDS 70140 71717 . + 0 ID=cds-WP_014848111.1;Parent=gene-AL60_RS22420;Dbxref=GenBank:WP_014848111.1;Name=WP_014848111.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177902.1;locus_tag=AL60_RS22420;product=PE family protein;protein_id=WP_014848111.1;transl_table=11 NZ_KK316857.1 RefSeq pseudogene 71741 71955 . - . ID=gene-AL60_RS27225;Name=AL60_RS27225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27225;pseudo=true NZ_KK316857.1 Protein Homology CDS 71741 71955 . - 0 ID=cds-AL60_RS27225;Parent=gene-AL60_RS27225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007172553.1;locus_tag=AL60_RS27225;product=DUF3046 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316857.1 RefSeq gene 72032 72241 . + . ID=gene-AL60_RS27230;Name=AL60_RS27230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27230 NZ_KK316857.1 Protein Homology CDS 72032 72241 . + 0 ID=cds-WP_003918495.1;Parent=gene-AL60_RS27230;Dbxref=GenBank:WP_003918495.1;Name=WP_003918495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918495.1;locus_tag=AL60_RS27230;product=limonene-1%2C2-epoxide hydrolase family protein;protein_id=WP_003918495.1;transl_table=11 NZ_KK316857.1 RefSeq gene 72245 72649 . + . ID=gene-AL60_RS27235;Name=AL60_RS27235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27235 NZ_KK316857.1 Protein Homology CDS 72245 72649 . + 0 ID=cds-WP_003912838.1;Parent=gene-AL60_RS27235;Dbxref=GenBank:WP_003912838.1;Name=WP_003912838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631471.1;locus_tag=AL60_RS27235;product=DUF5313 domain-containing protein;protein_id=WP_003912838.1;transl_table=11 NZ_KK316857.1 RefSeq gene 72646 73458 . - . ID=gene-AL60_RS22430;Name=pspM;gbkey=Gene;gene=pspM;gene_biotype=protein_coding;locus_tag=AL60_RS22430;old_locus_tag=AL60_03452 NZ_KK316857.1 Protein Homology CDS 72646 73458 . - 0 ID=cds-WP_003414026.1;Parent=gene-AL60_RS22430;Dbxref=GenBank:WP_003414026.1;Name=WP_003414026.1;gbkey=CDS;gene=pspM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217259.1;locus_tag=AL60_RS22430;product=phage shock envelope stress response protein PspM;protein_id=WP_003414026.1;transl_table=11 NZ_KK316857.1 RefSeq gene 73477 74289 . - . ID=gene-AL60_RS22435;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=AL60_RS22435;old_locus_tag=AL60_03453 NZ_KK316857.1 Protein Homology CDS 73477 74289 . - 0 ID=cds-WP_003414030.1;Parent=gene-AL60_RS22435;Dbxref=GenBank:WP_003414030.1;Name=WP_003414030.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177903.1;locus_tag=AL60_RS22435;product=phage shock protein PspA;protein_id=WP_003414030.1;transl_table=11 NZ_KK316857.1 RefSeq gene 74419 74757 . - . ID=gene-AL60_RS22440;Name=clgR;gbkey=Gene;gene=clgR;gene_biotype=protein_coding;locus_tag=AL60_RS22440;old_locus_tag=AL60_03454 NZ_KK316857.1 Protein Homology CDS 74419 74757 . - 0 ID=cds-WP_003414032.1;Parent=gene-AL60_RS22440;Dbxref=GenBank:WP_003414032.1;Name=WP_003414032.1;gbkey=CDS;gene=clgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217261.1;locus_tag=AL60_RS22440;product=transcriptional regulator ClgR;protein_id=WP_003414032.1;transl_table=11 NZ_KK316857.1 RefSeq gene 74828 75427 . - . ID=gene-AL60_RS22445;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AL60_RS22445;old_locus_tag=AL60_03455 NZ_KK316857.1 Protein Homology CDS 74828 75427 . - 0 ID=cds-WP_003911983.1;Parent=gene-AL60_RS22445;Dbxref=GenBank:WP_003911983.1;Name=WP_003911983.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911983.1;locus_tag=AL60_RS22445;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_003911983.1;transl_table=11 NZ_KK316857.1 RefSeq gene 75488 76012 . + . ID=gene-AL60_RS22450;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=AL60_RS22450;old_locus_tag=AL60_03456 NZ_KK316857.1 Protein Homology CDS 75488 76012 . + 0 ID=cds-WP_003414037.1;Parent=gene-AL60_RS22450;Dbxref=GenBank:WP_003414037.1;Name=WP_003414037.1;Ontology_term=GO:0006526,GO:0008080;gbkey=CDS;gene=argA;go_function=N-acetyltransferase activity|0008080||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217263.1;locus_tag=AL60_RS22450;product=amino-acid N-acetyltransferase;protein_id=WP_003414037.1;transl_table=11 NZ_KK316857.1 RefSeq gene 76081 78732 . - . ID=gene-AL60_RS22455;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=AL60_RS22455;old_locus_tag=AL60_03457 NZ_KK316857.1 Protein Homology CDS 76081 78732 . - 0 ID=cds-WP_003414040.1;Parent=gene-AL60_RS22455;Dbxref=GenBank:WP_003414040.1;Name=WP_003414040.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217264.1;locus_tag=AL60_RS22455;product=DNA translocase FtsK;protein_id=WP_003414040.1;transl_table=11 NZ_KK316857.1 RefSeq gene 78731 79045 . + . ID=gene-AL60_RS22460;Name=AL60_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22460;old_locus_tag=AL60_03458 NZ_KK316857.1 Protein Homology CDS 78731 79045 . + 0 ID=cds-WP_003414042.1;Parent=gene-AL60_RS22460;Dbxref=GenBank:WP_003414042.1;Name=WP_003414042.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217265.1;locus_tag=AL60_RS22460;product=putative quinol monooxygenase;protein_id=WP_003414042.1;transl_table=11 NZ_KK316857.1 RefSeq gene 79042 79860 . + . ID=gene-AL60_RS22465;Name=AL60_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22465;old_locus_tag=AL60_03459 NZ_KK316857.1 Protein Homology CDS 79042 79860 . + 0 ID=cds-WP_003414045.1;Parent=gene-AL60_RS22465;Dbxref=GenBank:WP_003414045.1;Name=WP_003414045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217266.1;locus_tag=AL60_RS22465;product=Rv2750 family mycofactocin-dependent SDR oxidoreductase;protein_id=WP_003414045.1;transl_table=11 NZ_KK316857.1 RefSeq gene 79864 80754 . + . ID=gene-AL60_RS22470;Name=AL60_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22470;old_locus_tag=AL60_03460 NZ_KK316857.1 Protein Homology CDS 79864 80754 . + 0 ID=cds-WP_003899463.1;Parent=gene-AL60_RS22470;Dbxref=GenBank:WP_003899463.1;Name=WP_003899463.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217267.1;locus_tag=AL60_RS22470;product=class I SAM-dependent methyltransferase;protein_id=WP_003899463.1;transl_table=11 NZ_KK316857.1 RefSeq gene 80741 82417 . - . ID=gene-AL60_RS22475;Name=rnj;gbkey=Gene;gene=rnj;gene_biotype=protein_coding;locus_tag=AL60_RS22475;old_locus_tag=AL60_03461 NZ_KK316857.1 Protein Homology CDS 80741 82417 . - 0 ID=cds-WP_003414049.1;Parent=gene-AL60_RS22475;Dbxref=GenBank:WP_003414049.1;Name=WP_003414049.1;gbkey=CDS;gene=rnj;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217268.1;locus_tag=AL60_RS22475;product=ribonuclease J;protein_id=WP_003414049.1;transl_table=11 NZ_KK316857.1 RefSeq gene 82448 83350 . - . ID=gene-AL60_RS22480;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=AL60_RS22480;old_locus_tag=AL60_03462 NZ_KK316857.1 Protein Homology CDS 82448 83350 . - 0 ID=cds-WP_003900564.1;Parent=gene-AL60_RS22480;Dbxref=GenBank:WP_003900564.1;Name=WP_003900564.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217269.1;locus_tag=AL60_RS22480;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_003900564.1;transl_table=11 NZ_KK316857.1 RefSeq gene 83419 84171 . - . ID=gene-AL60_RS22485;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;locus_tag=AL60_RS22485;old_locus_tag=AL60_03463 NZ_KK316857.1 Protein Homology CDS 83419 84171 . - 0 ID=cds-WP_003899465.1;Parent=gene-AL60_RS22485;Dbxref=GenBank:WP_003899465.1;Name=WP_003899465.1;Ontology_term=GO:0006231,GO:0050660,GO:0050797;gbkey=CDS;gene=thyX;go_function=flavin adenine dinucleotide binding|0050660||IEA,thymidylate synthase (FAD) activity|0050797||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217270.1;locus_tag=AL60_RS22485;product=FAD-dependent thymidylate synthase;protein_id=WP_003899465.1;transl_table=11 NZ_KK316857.1 RefSeq gene 84415 84690 . - . ID=gene-AL60_RS22490;Name=AL60_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22490;old_locus_tag=AL60_03464 NZ_KK316857.1 Protein Homology CDS 84415 84690 . - 0 ID=cds-WP_003414055.1;Parent=gene-AL60_RS22490;Dbxref=GenBank:WP_003414055.1;Name=WP_003414055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293900.1;locus_tag=AL60_RS22490;product=restriction endonuclease subunit S domain-containing protein;protein_id=WP_003414055.1;transl_table=11 NZ_KK316857.1 RefSeq gene 84687 86309 . - . ID=gene-AL60_RS22495;Name=hsdM;gbkey=Gene;gene=hsdM;gene_biotype=protein_coding;locus_tag=AL60_RS22495;old_locus_tag=AL60_03465 NZ_KK316857.1 Protein Homology CDS 84687 86309 . - 0 ID=cds-WP_003906897.1;Parent=gene-AL60_RS22495;Dbxref=GenBank:WP_003906897.1;Name=WP_003906897.1;gbkey=CDS;gene=hsdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217272.1;locus_tag=AL60_RS22495;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_003906897.1;transl_table=11 NZ_KK316857.1 RefSeq gene 86396 86812 . - . ID=gene-AL60_RS22500;Name=vapC21;gbkey=Gene;gene=vapC21;gene_biotype=protein_coding;locus_tag=AL60_RS22500;old_locus_tag=AL60_03466 NZ_KK316857.1 Protein Homology CDS 86396 86812 . - 0 ID=cds-WP_003414059.1;Parent=gene-AL60_RS22500;Dbxref=GenBank:WP_003414059.1;Name=WP_003414059.1;gbkey=CDS;gene=vapC21;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217273.1;locus_tag=AL60_RS22500;product=type II toxin-antitoxin system toxin ribonuclease C21;protein_id=WP_003414059.1;transl_table=11 NZ_KK316857.1 RefSeq gene 86809 87075 . - . ID=gene-AL60_RS22505;Name=AL60_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22505;old_locus_tag=AL60_03467 NZ_KK316857.1 Protein Homology CDS 86809 87075 . - 0 ID=cds-WP_003414061.1;Parent=gene-AL60_RS22505;Dbxref=GenBank:WP_003414061.1;Name=WP_003414061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217274.1;locus_tag=AL60_RS22505;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003414061.1;transl_table=11 NZ_KK316857.1 RefSeq gene 87101 87496 . - . ID=gene-AL60_RS22510;Name=AL60_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22510;old_locus_tag=AL60_03468 NZ_KK316857.1 Protein Homology CDS 87101 87496 . - 0 ID=cds-WP_003414064.1;Parent=gene-AL60_RS22510;Dbxref=GenBank:WP_003414064.1;Name=WP_003414064.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217275.1;locus_tag=AL60_RS22510;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414064.1;transl_table=11 NZ_KK316857.1 RefSeq gene 87493 87762 . - . ID=gene-AL60_RS22515;Name=AL60_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22515;old_locus_tag=AL60_03469 NZ_KK316857.1 Protein Homology CDS 87493 87762 . - 0 ID=cds-WP_003414066.1;Parent=gene-AL60_RS22515;Dbxref=GenBank:WP_003414066.1;Name=WP_003414066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217276.1;locus_tag=AL60_RS22515;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003414066.1;transl_table=11 NZ_KK316857.1 RefSeq gene 87772 88866 . - . ID=gene-AL60_RS22520;Name=hsdS;gbkey=Gene;gene=hsdS;gene_biotype=protein_coding;locus_tag=AL60_RS22520;old_locus_tag=AL60_03470 NZ_KK316857.1 Protein Homology CDS 87772 88866 . - 0 ID=cds-WP_003414068.1;Parent=gene-AL60_RS22520;Dbxref=GenBank:WP_003414068.1;Name=WP_003414068.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;gene=hsdS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217277.1;locus_tag=AL60_RS22520;product=restriction endonuclease subunit S;protein_id=WP_003414068.1;transl_table=11 NZ_KK316857.1 RefSeq gene 88863 89282 . - . ID=gene-AL60_RS22525;Name=AL60_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22525;old_locus_tag=AL60_03471 NZ_KK316857.1 Protein Homology CDS 88863 89282 . - 0 ID=cds-WP_003414070.1;Parent=gene-AL60_RS22525;Dbxref=GenBank:WP_003414070.1;Name=WP_003414070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217278.1;locus_tag=AL60_RS22525;product=winged helix DNA-binding domain-containing protein;protein_id=WP_003414070.1;transl_table=11 NZ_KK316857.1 RefSeq gene 89356 89835 . - . ID=gene-AL60_RS22530;Name=dfrA;gbkey=Gene;gene=dfrA;gene_biotype=protein_coding;locus_tag=AL60_RS22530;old_locus_tag=AL60_03472 NZ_KK316857.1 Protein Homology CDS 89356 89835 . - 0 ID=cds-WP_003414073.1;Parent=gene-AL60_RS22530;Dbxref=GenBank:WP_003414073.1;Name=WP_003414073.1;Ontology_term=GO:0004146;gbkey=CDS;gene=dfrA;go_function=dihydrofolate reductase activity|0004146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217279.1;locus_tag=AL60_RS22530;product=dihydrofolate reductase;protein_id=WP_003414073.1;transl_table=11 NZ_KK316857.1 RefSeq gene 89906 90706 . - . ID=gene-AL60_RS22535;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=AL60_RS22535;old_locus_tag=AL60_03473 NZ_KK316857.1 Protein Homology CDS 89906 90706 . - 0 ID=cds-WP_009939104.1;Parent=gene-AL60_RS22535;Dbxref=GenBank:WP_009939104.1;Name=WP_009939104.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875188.1;locus_tag=AL60_RS22535;product=thymidylate synthase;protein_id=WP_009939104.1;transl_table=11 NZ_KK316857.1 RefSeq gene 90862 91599 . + . ID=gene-AL60_RS22540;Name=AL60_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22540;old_locus_tag=AL60_03474 NZ_KK316857.1 Protein Homology CDS 90862 91599 . + 0 ID=cds-WP_003414079.1;Parent=gene-AL60_RS22540;Dbxref=GenBank:WP_003414079.1;Name=WP_003414079.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217281.1;locus_tag=AL60_RS22540;product=dienelactone hydrolase family protein;protein_id=WP_003414079.1;transl_table=11 NZ_KK316857.1 RefSeq gene 91814 92596 . - . ID=gene-AL60_RS22545;Name=AL60_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22545;old_locus_tag=AL60_03475 NZ_KK316857.1 Protein Homology CDS 91814 92596 . - 0 ID=cds-WP_003414081.1;Parent=gene-AL60_RS22545;Dbxref=GenBank:WP_003414081.1;Name=WP_003414081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177905.1;locus_tag=AL60_RS22545;product=SDR family oxidoreductase;protein_id=WP_003414081.1;transl_table=11 NZ_KK316857.1 RefSeq gene 92593 92946 . - . ID=gene-AL60_RS26450;Name=AL60_RS26450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26450;old_locus_tag=AL60_03476 NZ_KK316857.1 Protein Homology CDS 92593 92946 . - 0 ID=cds-WP_003900567.1;Parent=gene-AL60_RS26450;Dbxref=GenBank:WP_003900567.1;Name=WP_003900567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217283.1;locus_tag=AL60_RS26450;product=hypothetical protein;protein_id=WP_003900567.1;transl_table=11 NZ_KK316857.1 RefSeq gene 92829 93119 . - . ID=gene-AL60_RS27675;Name=AL60_RS27675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27675 NZ_KK316857.1 Protein Homology CDS 92829 93119 . - 0 ID=cds-WP_003899467.1;Parent=gene-AL60_RS27675;Dbxref=GenBank:WP_003899467.1;Name=WP_003899467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414083.1;locus_tag=AL60_RS27675;product=hypothetical protein;protein_id=WP_003899467.1;transl_table=11 NZ_KK316857.1 RefSeq gene 93120 94304 . - . ID=gene-AL60_RS22550;Name=AL60_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22550;old_locus_tag=AL60_03477 NZ_KK316857.1 Protein Homology CDS 93120 94304 . - 0 ID=cds-WP_003906901.1;Parent=gene-AL60_RS22550;Dbxref=GenBank:WP_003906901.1;Name=WP_003906901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177906.1;locus_tag=AL60_RS22550;product=PPE family protein;protein_id=WP_003906901.1;transl_table=11 NZ_KK316857.1 RefSeq gene 94384 95211 . - . ID=gene-AL60_RS22555;Name=AL60_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22555;old_locus_tag=AL60_03478 NZ_KK316857.1 Protein Homology CDS 94384 95211 . - 0 ID=cds-WP_003906902.1;Parent=gene-AL60_RS22555;Dbxref=GenBank:WP_003906902.1;Name=WP_003906902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177907.1;locus_tag=AL60_RS22555;product=PPE family protein%2C SVP subgroup;protein_id=WP_003906902.1;transl_table=11 NZ_KK316857.1 RefSeq gene 95535 96683 . - . ID=gene-AL60_RS22560;Name=AL60_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22560;old_locus_tag=AL60_03479 NZ_KK316857.1 Protein Homology CDS 95535 96683 . - 0 ID=cds-WP_003906903.1;Parent=gene-AL60_RS22560;Dbxref=GenBank:WP_003906903.1;Name=WP_003906903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177677.1;locus_tag=AL60_RS22560;product=PPE family protein;protein_id=WP_003906903.1;transl_table=11 NZ_KK316857.1 RefSeq gene 96807 97259 . - . ID=gene-AL60_RS22565;Name=AL60_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22565;old_locus_tag=AL60_03480 NZ_KK316857.1 Protein Homology CDS 96807 97259 . - 0 ID=cds-WP_003414091.1;Parent=gene-AL60_RS22565;Dbxref=GenBank:WP_003414091.1;Name=WP_003414091.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217287.1;locus_tag=AL60_RS22565;product=flavodoxin family protein;protein_id=WP_003414091.1;transl_table=11 NZ_KK316857.1 RefSeq gene 97345 97818 . - . ID=gene-AL60_RS22570;Name=AL60_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22570;old_locus_tag=AL60_03481 NZ_KK316857.1 Protein Homology CDS 97345 97818 . - 0 ID=cds-WP_003414097.1;Parent=gene-AL60_RS22570;Dbxref=GenBank:WP_003414097.1;Name=WP_003414097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217288.1;locus_tag=AL60_RS22570;product=hypothetical protein;protein_id=WP_003414097.1;transl_table=11 NZ_KK316857.1 RefSeq gene 97830 98567 . - . ID=gene-AL60_RS22575;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=AL60_RS22575;old_locus_tag=AL60_03482 NZ_KK316857.1 Protein Homology CDS 97830 98567 . - 0 ID=cds-WP_003414099.1;Parent=gene-AL60_RS22575;Dbxref=GenBank:WP_003414099.1;Name=WP_003414099.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217289.1;locus_tag=AL60_RS22575;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_003414099.1;transl_table=11 NZ_KK316857.1 RefSeq gene 98578 98982 . - . ID=gene-AL60_RS22580;Name=AL60_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22580;old_locus_tag=AL60_03483 NZ_KK316857.1 Protein Homology CDS 98578 98982 . - 0 ID=cds-WP_003900570.1;Parent=gene-AL60_RS22580;Dbxref=GenBank:WP_003900570.1;Name=WP_003900570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217290.1;locus_tag=AL60_RS22580;product=hypothetical protein;protein_id=WP_003900570.1;transl_table=11 NZ_KK316857.1 RefSeq gene 99039 99596 . + . ID=gene-AL60_RS22585;Name=AL60_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22585;old_locus_tag=AL60_03484 NZ_KK316857.1 Protein Homology CDS 99039 99596 . + 0 ID=cds-WP_003899472.1;Parent=gene-AL60_RS22585;Dbxref=GenBank:WP_003899472.1;Name=WP_003899472.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899472.1;locus_tag=AL60_RS22585;product=GNAT family N-acetyltransferase;protein_id=WP_003899472.1;transl_table=11 NZ_KK316857.1 RefSeq gene 99600 100691 . - . ID=gene-AL60_RS22590;Name=AL60_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22590;old_locus_tag=AL60_03485 NZ_KK316857.1 Protein Homology CDS 99600 100691 . - 0 ID=cds-WP_003900572.1;Parent=gene-AL60_RS22590;Dbxref=GenBank:WP_003900572.1;Name=WP_003900572.1;Ontology_term=GO:0010181,GO:0016491,GO:0046872,GO:0051537;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900572.1;locus_tag=AL60_RS22590;product=PDR/VanB family oxidoreductase;protein_id=WP_003900572.1;transl_table=11 NZ_KK316857.1 RefSeq gene 100711 101781 . - . ID=gene-AL60_RS22595;Name=AL60_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22595;old_locus_tag=AL60_03486 NZ_KK316857.1 Protein Homology CDS 100711 101781 . - 0 ID=cds-WP_003414107.1;Parent=gene-AL60_RS22595;Dbxref=GenBank:WP_003414107.1;Name=WP_003414107.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217293.1;locus_tag=AL60_RS22595;product=metal-dependent hydrolase;protein_id=WP_003414107.1;transl_table=11 NZ_KK316857.1 RefSeq gene 101939 102409 . - . ID=gene-AL60_RS22600;Name=AL60_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22600;old_locus_tag=AL60_03487 NZ_KK316857.1 Protein Homology CDS 101939 102409 . - 0 ID=cds-WP_003899475.1;Parent=gene-AL60_RS22600;Dbxref=GenBank:WP_003899475.1;Name=WP_003899475.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217294.1;locus_tag=AL60_RS22600;product=SRPBCC family protein;protein_id=WP_003899475.1;transl_table=11 NZ_KK316857.1 RefSeq gene 102441 102956 . - . ID=gene-AL60_RS22605;Name=AL60_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22605;old_locus_tag=AL60_03488 NZ_KK316857.1 Protein Homology CDS 102441 102956 . - 0 ID=cds-WP_009939105.1;Parent=gene-AL60_RS22605;Dbxref=GenBank:WP_009939105.1;Name=WP_009939105.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939105.1;locus_tag=AL60_RS22605;product=HTH-type transcriptional regulator AldR;protein_id=WP_009939105.1;transl_table=11 NZ_KK316857.1 RefSeq gene 103046 104161 . + . ID=gene-AL60_RS22610;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=AL60_RS22610;old_locus_tag=AL60_03489 NZ_KK316857.1 Protein Homology CDS 103046 104161 . + 0 ID=cds-WP_003899477.1;Parent=gene-AL60_RS22610;Dbxref=GenBank:WP_003899477.1;Name=WP_003899477.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217296.1;locus_tag=AL60_RS22610;product=alanine dehydrogenase;protein_id=WP_003899477.1;transl_table=11 NZ_KK316857.1 RefSeq gene 104176 105210 . - . ID=gene-AL60_RS22615;Name=AL60_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22615;old_locus_tag=AL60_03490 NZ_KK316857.1 Protein Homology CDS 104176 105210 . - 0 ID=cds-WP_003899478.1;Parent=gene-AL60_RS22615;Dbxref=GenBank:WP_003899478.1;Name=WP_003899478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217297.1;locus_tag=AL60_RS22615;product=nitronate monooxygenase;protein_id=WP_003899478.1;transl_table=11 NZ_KK316857.1 RefSeq gene 105271 106587 . - . ID=gene-AL60_RS22620;Name=pepR;gbkey=Gene;gene=pepR;gene_biotype=protein_coding;locus_tag=AL60_RS22620;old_locus_tag=AL60_03491 NZ_KK316857.1 Protein Homology CDS 105271 106587 . - 0 ID=cds-WP_003414119.1;Parent=gene-AL60_RS22620;Dbxref=GenBank:WP_003414119.1;Name=WP_003414119.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=pepR;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217298.1;locus_tag=AL60_RS22620;product=M16 family metallopeptidase;protein_id=WP_003414119.1;transl_table=11 NZ_KK316857.1 RefSeq gene 106565 108823 . - . ID=gene-AL60_RS22625;Name=gpsI;gbkey=Gene;gene=gpsI;gene_biotype=protein_coding;locus_tag=AL60_RS22625;old_locus_tag=AL60_03492 NZ_KK316857.1 Protein Homology CDS 106565 108823 . - 0 ID=cds-WP_003414124.1;Parent=gene-AL60_RS22625;Dbxref=GenBank:WP_003414124.1;Name=WP_003414124.1;Ontology_term=GO:0006396,GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=gpsI;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=RNA processing|0006396||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217299.1;locus_tag=AL60_RS22625;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_003414124.1;transl_table=11 NZ_KK316857.1 RefSeq gene 109177 109692 . - . ID=gene-AL60_RS22630;Name=lppU;gbkey=Gene;gene=lppU;gene_biotype=protein_coding;locus_tag=AL60_RS22630;old_locus_tag=AL60_03493 NZ_KK316857.1 Protein Homology CDS 109177 109692 . - 0 ID=cds-WP_003899480.1;Parent=gene-AL60_RS22630;Dbxref=GenBank:WP_003899480.1;Name=WP_003899480.1;gbkey=CDS;gene=lppU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217300.1;locus_tag=AL60_RS22630;product=LppU family putative lipoprotein;protein_id=WP_003899480.1;transl_table=11 NZ_KK316857.1 RefSeq gene 109705 109974 . - . ID=gene-AL60_RS22635;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AL60_RS22635;old_locus_tag=AL60_03494 NZ_KK316857.1 Protein Homology CDS 109705 109974 . - 0 ID=cds-WP_003414128.1;Parent=gene-AL60_RS22635;Dbxref=GenBank:WP_003414128.1;Name=WP_003414128.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011559497.1;locus_tag=AL60_RS22635;product=30S ribosomal protein S15;protein_id=WP_003414128.1;transl_table=11 NZ_KK316857.1 RefSeq gene 110131 111105 . - . ID=gene-AL60_RS22640;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AL60_RS22640;old_locus_tag=AL60_03495 NZ_KK316857.1 Protein Homology CDS 110131 111105 . - 0 ID=cds-WP_003911989.1;Parent=gene-AL60_RS22640;Dbxref=GenBank:WP_003911989.1;Name=WP_003911989.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911989.1;locus_tag=AL60_RS22640;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_003911989.1;transl_table=11 NZ_KK316857.1 RefSeq gene 111337 113100 . + . ID=gene-AL60_RS22645;Name=AL60_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22645;old_locus_tag=AL60_03496 NZ_KK316857.1 Protein Homology CDS 111337 113100 . + 0 ID=cds-WP_012054328.1;Parent=gene-AL60_RS22645;Dbxref=GenBank:WP_012054328.1;Name=WP_012054328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217303.1;locus_tag=AL60_RS22645;product=nucleotide-binding protein;protein_id=WP_012054328.1;transl_table=11 NZ_KK316857.1 RefSeq gene 113185 113871 . + . ID=gene-AL60_RS22650;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=AL60_RS22650;old_locus_tag=AL60_03497 NZ_KK316857.1 Protein Homology CDS 113185 113871 . + 0 ID=cds-WP_003414136.1;Parent=gene-AL60_RS22650;Dbxref=GenBank:WP_003414136.1;Name=WP_003414136.1;gbkey=CDS;gene=mntR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217304.1;locus_tag=AL60_RS22650;product=manganese-binding transcriptional regulator MntR;protein_id=WP_003414136.1;transl_table=11 NZ_KK316857.1 RefSeq gene 113932 115164 . - . ID=gene-AL60_RS22655;Name=AL60_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22655;old_locus_tag=AL60_03498 NZ_KK316857.1 Protein Homology CDS 113932 115164 . - 0 ID=cds-WP_003414139.1;Parent=gene-AL60_RS22655;Dbxref=GenBank:WP_003414139.1;Name=WP_003414139.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217305.1;locus_tag=AL60_RS22655;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003414139.1;transl_table=11 NZ_KK316857.1 RefSeq gene 115190 116395 . - . ID=gene-AL60_RS22660;Name=AL60_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22660;old_locus_tag=AL60_03499 NZ_KK316857.1 Protein Homology CDS 115190 116395 . - 0 ID=cds-WP_003414142.1;Parent=gene-AL60_RS22660;Dbxref=GenBank:WP_003414142.1;Name=WP_003414142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217306.3;locus_tag=AL60_RS22660;product=lipid-transfer protein;protein_id=WP_003414142.1;transl_table=11 NZ_KK316857.1 RefSeq gene 116428 117807 . - . ID=gene-AL60_RS22665;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AL60_RS22665;old_locus_tag=AL60_03500 NZ_KK316857.1 Protein Homology CDS 116428 117807 . - 0 ID=cds-WP_003906908.1;Parent=gene-AL60_RS22665;Dbxref=GenBank:WP_003906908.1;Name=WP_003906908.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217307.1;locus_tag=AL60_RS22665;product=IS607 family element RNA-guided endonuclease TnpB;protein_id=WP_003906908.1;transl_table=11 NZ_KK316857.1 RefSeq gene 117807 118388 . - . ID=gene-AL60_RS22670;Name=AL60_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22670;old_locus_tag=AL60_03501 NZ_KK316857.1 Protein Homology CDS 117807 118388 . - 0 ID=cds-WP_003414146.1;Parent=gene-AL60_RS22670;Dbxref=GenBank:WP_003414146.1;Name=WP_003414146.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217308.1;locus_tag=AL60_RS22670;product=IS607-like element IS1602 family transposase;protein_id=WP_003414146.1;transl_table=11 NZ_KK316857.1 RefSeq gene 118590 119486 . - . ID=gene-AL60_RS22675;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AL60_RS22675;old_locus_tag=AL60_03502 NZ_KK316857.1 Protein Homology CDS 118590 119486 . - 0 ID=cds-WP_003414147.1;Parent=gene-AL60_RS22675;Dbxref=GenBank:WP_003414147.1;Name=WP_003414147.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217309.1;locus_tag=AL60_RS22675;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_003414147.1;transl_table=11 NZ_KK316857.1 RefSeq gene 119483 120166 . - . ID=gene-AL60_RS22680;Name=pptT;gbkey=Gene;gene=pptT;gene_biotype=protein_coding;locus_tag=AL60_RS22680;old_locus_tag=AL60_03503 NZ_KK316857.1 Protein Homology CDS 119483 120166 . - 0 ID=cds-WP_003414149.1;Parent=gene-AL60_RS22680;Dbxref=GenBank:WP_003414149.1;Name=WP_003414149.1;gbkey=CDS;gene=pptT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217310.1;locus_tag=AL60_RS22680;product=4'-phosphopantetheinyl transferase;protein_id=WP_003414149.1;transl_table=11 NZ_KK316857.1 RefSeq gene 120163 121137 . - . ID=gene-AL60_RS22685;Name=AL60_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22685;old_locus_tag=AL60_03504 NZ_KK316857.1 Protein Homology CDS 120163 121137 . - 0 ID=cds-WP_003414151.1;Parent=gene-AL60_RS22685;Dbxref=GenBank:WP_003414151.1;Name=WP_003414151.1;Ontology_term=GO:0016787,GO:0042578,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217311.1;locus_tag=AL60_RS22685;product=metallophosphoesterase family protein;protein_id=WP_003414151.1;transl_table=11 NZ_KK316857.1 RefSeq gene 121282 121845 . - . ID=gene-AL60_RS22690;Name=lppV;gbkey=Gene;gene=lppV;gene_biotype=protein_coding;locus_tag=AL60_RS22690;old_locus_tag=AL60_03505 NZ_KK316857.1 Protein Homology CDS 121282 121845 . - 0 ID=cds-WP_003900574.1;Parent=gene-AL60_RS22690;Dbxref=GenBank:WP_003900574.1;Name=WP_003900574.1;gbkey=CDS;gene=lppV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217312.1;locus_tag=AL60_RS22690;product=LppA family lipoprotein;protein_id=WP_003900574.1;transl_table=11 NZ_KK316857.1 RefSeq gene 121845 123533 . - . ID=gene-AL60_RS22695;Name=AL60_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22695;old_locus_tag=AL60_03506 NZ_KK316857.1 Protein Homology CDS 121845 123533 . - 0 ID=cds-WP_003414155.1;Parent=gene-AL60_RS22695;Dbxref=GenBank:WP_003414155.1;Name=WP_003414155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217313.1;locus_tag=AL60_RS22695;product=alpha/beta hydrolase family protein;protein_id=WP_003414155.1;transl_table=11 NZ_KK316857.1 RefSeq gene 123537 123863 . - . ID=gene-AL60_RS22700;Name=AL60_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22700;old_locus_tag=AL60_03507 NZ_KK316857.1 Protein Homology CDS 123537 123863 . - 0 ID=cds-WP_003414157.1;Parent=gene-AL60_RS22700;Dbxref=GenBank:WP_003414157.1;Name=WP_003414157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217314.1;locus_tag=AL60_RS22700;product=hypothetical protein;protein_id=WP_003414157.1;transl_table=11 NZ_KK316857.1 RefSeq gene 124036 124623 . + . ID=gene-AL60_RS22705;Name=AL60_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22705;old_locus_tag=AL60_03508 NZ_KK316857.1 Protein Homology CDS 124036 124623 . + 0 ID=cds-WP_023641719.1;Parent=gene-AL60_RS22705;Dbxref=GenBank:WP_023641719.1;Name=WP_023641719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978043.1;locus_tag=AL60_RS22705;product=DUF3558 domain-containing protein;protein_id=WP_023641719.1;transl_table=11 NZ_KK316857.1 RefSeq gene 124642 126291 . + . ID=gene-AL60_RS22710;Name=AL60_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22710;old_locus_tag=AL60_03509 NZ_KK316857.1 Protein Homology CDS 124642 126291 . + 0 ID=cds-WP_003899485.1;Parent=gene-AL60_RS22710;Dbxref=GenBank:WP_003899485.1;Name=WP_003899485.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217316.1;locus_tag=AL60_RS22710;product=CocE/NonD family hydrolase;protein_id=WP_003899485.1;transl_table=11 NZ_KK316857.1 RefSeq gene 126393 126749 . - . ID=gene-AL60_RS22715;Name=mazF9;gbkey=Gene;gene=mazF9;gene_biotype=protein_coding;gene_synonym=mazF-mt1;locus_tag=AL60_RS22715;old_locus_tag=AL60_03510 NZ_KK316857.1 Protein Homology CDS 126393 126749 . - 0 ID=cds-WP_003414166.1;Parent=gene-AL60_RS22715;Dbxref=GenBank:WP_003414166.1;Name=WP_003414166.1;gbkey=CDS;gene=mazF9;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217317.1;locus_tag=AL60_RS22715;product=type II toxin-antitoxin system toxin endoribonuclease MazF9;protein_id=WP_003414166.1;transl_table=11 NZ_KK316857.1 RefSeq gene 126733 126963 . - . ID=gene-AL60_RS22720;Name=mazE9;gbkey=Gene;gene=mazE9;gene_biotype=protein_coding;locus_tag=AL60_RS22720;old_locus_tag=AL60_03511 NZ_KK316857.1 Protein Homology CDS 126733 126963 . - 0 ID=cds-WP_003901465.1;Parent=gene-AL60_RS22720;Dbxref=GenBank:WP_003901465.1;Name=WP_003901465.1;gbkey=CDS;gene=mazE9;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411507.1;locus_tag=AL60_RS22720;product=type II toxin-antitoxin system antitoxin MazE9;protein_id=WP_003901465.1;transl_table=11 NZ_KK316857.1 RefSeq gene 127006 128049 . - . ID=gene-AL60_RS22725;Name=AL60_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22725;old_locus_tag=AL60_03512 NZ_KK316857.1 Protein Homology CDS 127006 128049 . - 0 ID=cds-WP_003414172.1;Parent=gene-AL60_RS22725;Dbxref=GenBank:WP_003414172.1;Name=WP_003414172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217318.1;locus_tag=AL60_RS22725;product=DUF2293 domain-containing protein;protein_id=WP_003414172.1;transl_table=11 NZ_KK316857.1 RefSeq gene 128048 128515 . + . ID=gene-AL60_RS27680;Name=AL60_RS27680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27680;old_locus_tag=AL60_03513 NZ_KK316857.1 Protein Homology CDS 128048 128515 . + 0 ID=cds-WP_003414177.1;Parent=gene-AL60_RS27680;Dbxref=GenBank:WP_003414177.1;Name=WP_003414177.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020265.6;locus_tag=AL60_RS27680;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_003414177.1;transl_table=11 NZ_KK316857.1 RefSeq gene 128691 128945 . - . ID=gene-AL60_RS27240;Name=AL60_RS27240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27240 NZ_KK316857.1 GeneMarkS-2+ CDS 128691 128945 . - 0 ID=cds-WP_003917684.1;Parent=gene-AL60_RS27240;Dbxref=GenBank:WP_003917684.1;Name=WP_003917684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS27240;product=hypothetical protein;protein_id=WP_003917684.1;transl_table=11 NZ_KK316857.1 RefSeq gene 129093 129497 . + . ID=gene-AL60_RS22735;Name=AL60_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22735;old_locus_tag=AL60_03515 NZ_KK316857.1 Protein Homology CDS 129093 129497 . + 0 ID=cds-WP_009938577.1;Parent=gene-AL60_RS22735;Dbxref=GenBank:WP_009938577.1;Name=WP_009938577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217321.1;locus_tag=AL60_RS22735;product=hypothetical protein;protein_id=WP_009938577.1;transl_table=11 NZ_KK316857.1 RefSeq gene 129494 129685 . + . ID=gene-AL60_RS22740;Name=AL60_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22740;old_locus_tag=AL60_03516 NZ_KK316857.1 Protein Homology CDS 129494 129685 . + 0 ID=cds-WP_003414184.1;Parent=gene-AL60_RS22740;Dbxref=GenBank:WP_003414184.1;Name=WP_003414184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217322.1;locus_tag=AL60_RS22740;product=hypothetical protein;protein_id=WP_003414184.1;transl_table=11 NZ_KK316857.1 RefSeq pseudogene 129902 130186 . + . ID=gene-AL60_RS27685;Name=AL60_RS27685;end_range=130186,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27685;partial=true;pseudo=true NZ_KK316857.1 Protein Homology CDS 129902 130186 . + 0 ID=cds-AL60_RS27685;Parent=gene-AL60_RS27685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=130186,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217321.1;locus_tag=AL60_RS27685;partial=true;product=integrase catalytic domain-containing protein;pseudo=true;transl_table=11 NZ_KK316857.1 RefSeq gene 130211 131038 . + . ID=gene-AL60_RS28005;Name=AL60_RS28005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28005;old_locus_tag=AL60_03517 NZ_KK316857.1 Protein Homology CDS 130211 131038 . + 0 ID=cds-WP_323755006.1;Parent=gene-AL60_RS28005;Dbxref=GenBank:WP_323755006.1;Name=WP_323755006.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0005524,GO:0016893,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,obsolete endonuclease activity%2C active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters|0016893||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: protein motif:HMM:NF012870.6;locus_tag=AL60_RS28005;product=integrase catalytic domain-containing protein;protein_id=WP_323755006.1;transl_table=11 NZ_KK316857.1 RefSeq gene 131272 131529 . + . ID=gene-AL60_RS22750;Name=AL60_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22750;old_locus_tag=AL60_03518 NZ_KK316857.1 Protein Homology CDS 131272 131529 . + 0 ID=cds-WP_003899489.1;Parent=gene-AL60_RS22750;Dbxref=GenBank:WP_003899489.1;Name=WP_003899489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217324.1;locus_tag=AL60_RS22750;product=hypothetical protein;protein_id=WP_003899489.1;transl_table=11 NZ_KK316857.1 RefSeq gene 131634 131945 . + . ID=gene-AL60_RS22755;Name=AL60_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22755;old_locus_tag=AL60_03519 NZ_KK316857.1 Protein Homology CDS 131634 131945 . + 0 ID=cds-WP_003414190.1;Parent=gene-AL60_RS22755;Dbxref=GenBank:WP_003414190.1;Name=WP_003414190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217325.1;locus_tag=AL60_RS22755;product=hypothetical protein;protein_id=WP_003414190.1;transl_table=11 NZ_KK316857.1 RefSeq pseudogene 131967 132206 . - . ID=gene-AL60_RS26455;Name=AL60_RS26455;end_range=132206,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26455;old_locus_tag=AL60_03520;partial=true;pseudo=true NZ_KK316857.1 Protein Homology CDS 131967 132206 . - 0 ID=cds-AL60_RS26455;Parent=gene-AL60_RS26455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=132206,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017835819.1;locus_tag=AL60_RS26455;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_KK316857.1 RefSeq gene 132365 132973 . + . ID=gene-AL60_RS22760;Name=AL60_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22760;old_locus_tag=AL60_03521 NZ_KK316857.1 Protein Homology CDS 132365 132973 . + 0 ID=cds-WP_003414195.1;Parent=gene-AL60_RS22760;Dbxref=GenBank:WP_003414195.1;Name=WP_003414195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217327.1;locus_tag=AL60_RS22760;product=hypothetical protein;protein_id=WP_003414195.1;transl_table=11 NZ_KK316857.1 RefSeq gene 133044 134453 . + . ID=gene-AL60_RS22765;Name=AL60_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22765;old_locus_tag=AL60_03522 NZ_KK316857.1 Protein Homology CDS 133044 134453 . + 0 ID=cds-WP_003414198.1;Parent=gene-AL60_RS22765;Dbxref=GenBank:WP_003414198.1;Name=WP_003414198.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217328.1;locus_tag=AL60_RS22765;product=DDE-type integrase/transposase/recombinase;protein_id=WP_003414198.1;transl_table=11 NZ_KK316857.1 RefSeq gene 134450 135262 . + . ID=gene-AL60_RS22770;Name=AL60_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22770;old_locus_tag=AL60_03523 NZ_KK316857.1 Protein Homology CDS 134450 135262 . + 0 ID=cds-WP_003899491.1;Parent=gene-AL60_RS22770;Dbxref=GenBank:WP_003899491.1;Name=WP_003899491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217329.1;locus_tag=AL60_RS22770;product=ExeA family protein;protein_id=WP_003899491.1;transl_table=11 NZ_KK316857.1 RefSeq direct_repeat 135411 136694 . + . ID=id-NZ_KK316857.1:135411..136694;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=135411..135446;rpt_unit_seq=gtttccgtcccctctcggggttttgggtctgacgac NZ_KK316857.1 RefSeq gene 136792 137189 . - . ID=gene-AL60_RS22775;Name=AL60_RS22775;end_range=137189,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22775;old_locus_tag=AL60_03524;partial=true NZ_KK316857.1 Protein Homology CDS 136792 137189 . - 2 ID=cds-WP_031650382.1-2;Parent=gene-AL60_RS22775;Dbxref=GenBank:WP_031650382.1;Name=WP_031650382.1;end_range=137189,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS22775;partial=true;product=IS3 family transposase;protein_id=WP_031650382.1;transl_table=11 ##sequence-region NZ_KK316858.1 1 135309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316858.1 RefSeq region 1 135309 . + . ID=NZ_KK316858.1:1..135309;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316858.1 RefSeq gene 1 1529 . - . ID=gene-AL60_RS22780;Name=AL60_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22780;old_locus_tag=AL60_03525;partial=true;start_range=.,1 NZ_KK316858.1 Protein Homology CDS 1 1529 . - 0 ID=cds-WP_031659347.1;Parent=gene-AL60_RS22780;Dbxref=GenBank:WP_031659347.1;Name=WP_031659347.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215835.1;locus_tag=AL60_RS22780;partial=true;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_031659347.1;start_range=.,1;transl_table=11 NZ_KK316858.1 RefSeq gene 1542 3245 . - . ID=gene-AL60_RS22785;Name=AL60_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22785;old_locus_tag=AL60_03526 NZ_KK316858.1 Protein Homology CDS 1542 3245 . - 0 ID=cds-WP_003898821.1;Parent=gene-AL60_RS22785;Dbxref=GenBank:WP_003898821.1;Name=WP_003898821.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215836.1;locus_tag=AL60_RS22785;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003898821.1;transl_table=11 NZ_KK316858.1 RefSeq gene 3316 3987 . + . ID=gene-AL60_RS22790;Name=nucS;gbkey=Gene;gene=nucS;gene_biotype=protein_coding;locus_tag=AL60_RS22790;old_locus_tag=AL60_03527 NZ_KK316858.1 Protein Homology CDS 3316 3987 . + 0 ID=cds-WP_003406872.1;Parent=gene-AL60_RS22790;Dbxref=GenBank:WP_003406872.1;Name=WP_003406872.1;Ontology_term=GO:0004519;gbkey=CDS;gene=nucS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011893218.1;locus_tag=AL60_RS22790;product=endonuclease NucS;protein_id=WP_003406872.1;transl_table=11 NZ_KK316858.1 RefSeq gene 4010 4306 . + . ID=gene-AL60_RS22795;Name=AL60_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22795;old_locus_tag=AL60_03528 NZ_KK316858.1 Protein Homology CDS 4010 4306 . + 0 ID=cds-WP_003898823.1;Parent=gene-AL60_RS22795;Dbxref=GenBank:WP_003898823.1;Name=WP_003898823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215838.1;locus_tag=AL60_RS22795;product=hypothetical protein;protein_id=WP_003898823.1;transl_table=11 NZ_KK316858.1 RefSeq gene 4341 4799 . - . ID=gene-AL60_RS22800;Name=mce;gbkey=Gene;gene=mce;gene_biotype=protein_coding;locus_tag=AL60_RS22800;old_locus_tag=AL60_03529 NZ_KK316858.1 Protein Homology CDS 4341 4799 . - 0 ID=cds-WP_003406879.1;Parent=gene-AL60_RS22800;Dbxref=GenBank:WP_003406879.1;Name=WP_003406879.1;gbkey=CDS;gene=mce;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177643.1;locus_tag=AL60_RS22800;product=methylmalonyl-CoA epimerase;protein_id=WP_003406879.1;transl_table=11 NZ_KK316858.1 RefSeq gene 4878 6059 . + . ID=gene-AL60_RS22805;Name=AL60_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22805;old_locus_tag=AL60_03530 NZ_KK316858.1 Protein Homology CDS 4878 6059 . + 0 ID=cds-WP_023637385.1;Parent=gene-AL60_RS22805;Dbxref=GenBank:WP_023637385.1;Name=WP_023637385.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020726153.1;locus_tag=AL60_RS22805;product=acetyl-CoA C-acetyltransferase;protein_id=WP_023637385.1;transl_table=11 NZ_KK316858.1 RefSeq gene 6189 7103 . + . ID=gene-AL60_RS22810;Name=AL60_RS22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22810;old_locus_tag=AL60_03531 NZ_KK316858.1 Protein Homology CDS 6189 7103 . + 0 ID=cds-WP_003406887.1;Parent=gene-AL60_RS22810;Dbxref=GenBank:WP_003406887.1;Name=WP_003406887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215840.1;locus_tag=AL60_RS22810;product=thioredoxin family protein;protein_id=WP_003406887.1;transl_table=11 NZ_KK316858.1 RefSeq gene 7182 8993 . - . ID=gene-AL60_RS22815;Name=AL60_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22815;old_locus_tag=AL60_03532 NZ_KK316858.1 Protein Homology CDS 7182 8993 . - 0 ID=cds-WP_010886112.1;Parent=gene-AL60_RS22815;Dbxref=GenBank:WP_010886112.1;Name=WP_010886112.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177799.1;locus_tag=AL60_RS22815;product=PE family protein;protein_id=WP_010886112.1;transl_table=11 NZ_KK316858.1 RefSeq gene 9145 11340 . - . ID=gene-AL60_RS22820;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=AL60_RS22820;old_locus_tag=AL60_03533 NZ_KK316858.1 Protein Homology CDS 9145 11340 . - 0 ID=cds-WP_003900318.1;Parent=gene-AL60_RS22820;Dbxref=GenBank:WP_003900318.1;Name=WP_003900318.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215842.1;locus_tag=AL60_RS22820;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_003900318.1;transl_table=11 NZ_KK316858.1 RefSeq gene 11348 13414 . - . ID=gene-AL60_RS22825;Name=glgE;gbkey=Gene;gene=glgE;gene_biotype=protein_coding;locus_tag=AL60_RS22825;old_locus_tag=AL60_03534 NZ_KK316858.1 Protein Homology CDS 11348 13414 . - 0 ID=cds-WP_003915171.1;Parent=gene-AL60_RS22825;Dbxref=GenBank:WP_003915171.1;Name=WP_003915171.1;gbkey=CDS;gene=glgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915171.1;locus_tag=AL60_RS22825;product=alpha-1%2C4-glucan:maltose-1-phosphate maltosyltransferase;protein_id=WP_003915171.1;transl_table=11 NZ_KK316858.1 RefSeq gene 13592 16183 . + . ID=gene-AL60_RS22830;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=AL60_RS22830;old_locus_tag=AL60_03535 NZ_KK316858.1 Protein Homology CDS 13592 16183 . + 0 ID=cds-WP_003901135.1;Parent=gene-AL60_RS22830;Dbxref=GenBank:WP_003901135.1;Name=WP_003901135.1;gbkey=CDS;gene=glgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215844.1;locus_tag=AL60_RS22830;product=glycosyltransferase family 1 protein;protein_id=WP_003901135.1;transl_table=11 NZ_KK316858.1 RefSeq gene 16223 18217 . - . ID=gene-AL60_RS22835;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=AL60_RS22835;old_locus_tag=AL60_03536 NZ_KK316858.1 Protein Homology CDS 16223 18217 . - 0 ID=cds-WP_003898827.1;Parent=gene-AL60_RS22835;Dbxref=GenBank:WP_003898827.1;Name=WP_003898827.1;gbkey=CDS;gene=dinG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215845.1;locus_tag=AL60_RS22835;product=ATP-dependent helicase DinG;protein_id=WP_003898827.1;transl_table=11 NZ_KK316858.1 RefSeq gene 18241 19587 . - . ID=gene-AL60_RS22840;Name=AL60_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22840;old_locus_tag=AL60_03537 NZ_KK316858.1 Protein Homology CDS 18241 19587 . - 0 ID=cds-WP_003900321.1;Parent=gene-AL60_RS22840;Dbxref=GenBank:WP_003900321.1;Name=WP_003900321.1;Ontology_term=GO:0009435,GO:0004514,GO:0004516;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA,nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215846.2;locus_tag=AL60_RS22840;product=nicotinate phosphoribosyltransferase;protein_id=WP_003900321.1;transl_table=11 NZ_KK316858.1 RefSeq gene 19689 19994 . + . ID=gene-AL60_RS22845;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=AL60_RS22845;old_locus_tag=AL60_03538 NZ_KK316858.1 Protein Homology CDS 19689 19994 . + 0 ID=cds-WP_003406906.1;Parent=gene-AL60_RS22845;Dbxref=GenBank:WP_003406906.1;Name=WP_003406906.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215847.1;locus_tag=AL60_RS22845;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_003406906.1;transl_table=11 NZ_KK316858.1 RefSeq gene 20020 20610 . + . ID=gene-AL60_RS22850;Name=AL60_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22850;old_locus_tag=AL60_03539 NZ_KK316858.1 Protein Homology CDS 20020 20610 . + 0 ID=cds-WP_003406907.1;Parent=gene-AL60_RS22850;Dbxref=GenBank:WP_003406907.1;Name=WP_003406907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008254882.1;locus_tag=AL60_RS22850;product=oxidative stress transcriptional regulator AosR;protein_id=WP_003406907.1;transl_table=11 NZ_KK316858.1 RefSeq gene 20627 21661 . + . ID=gene-AL60_RS22855;Name=AL60_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22855;old_locus_tag=AL60_03540 NZ_KK316858.1 Protein Homology CDS 20627 21661 . + 0 ID=cds-WP_003406908.1;Parent=gene-AL60_RS22855;Dbxref=GenBank:WP_003406908.1;Name=WP_003406908.1;Ontology_term=GO:0006508,GO:0004177;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215849.1;locus_tag=AL60_RS22855;product=P1 family peptidase;protein_id=WP_003406908.1;transl_table=11 NZ_KK316858.1 RefSeq pseudogene 21669 21821 . + . ID=gene-AL60_RS0105350;Name=mec;end_range=21821,.;gbkey=Gene;gene=mec;gene_biotype=pseudogene;locus_tag=AL60_RS0105350;partial=true;pseudo=true NZ_KK316858.1 Protein Homology CDS 21669 21821 . + 0 ID=cds-AL60_RS0105350;Parent=gene-AL60_RS0105350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=21821,.;gbkey=CDS;gene=mec;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215850.1;locus_tag=AL60_RS0105350;partial=true;product=CysO-cysteine peptidase;pseudo=true;transl_table=11 NZ_KK316858.1 RefSeq pseudogene 21811 22293 . + . ID=gene-AL60_RS22860;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=pseudogene;locus_tag=AL60_RS22860;old_locus_tag=AL60_03541;partial=true;pseudo=true;start_range=.,21811 NZ_KK316858.1 Protein Homology CDS 21811 22293 . + 0 ID=cds-AL60_RS22860;Parent=gene-AL60_RS22860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=cysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215852.1;locus_tag=AL60_RS22860;partial=true;product=O-phosphoserine sulfhydrylase;pseudo=true;start_range=.,21811;transl_table=11 NZ_KK316858.1 RefSeq gene 22284 23006 . + . ID=gene-AL60_RS22865;Name=AL60_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22865;old_locus_tag=AL60_03542 NZ_KK316858.1 Protein Homology CDS 22284 23006 . + 0 ID=cds-WP_003898831.1;Parent=gene-AL60_RS22865;Dbxref=GenBank:WP_003898831.1;Name=WP_003898831.1;Ontology_term=GO:0006508,GO:0004252,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215853.1;locus_tag=AL60_RS22865;product=rhomboid family intramembrane serine protease;protein_id=WP_003898831.1;transl_table=11 NZ_KK316858.1 RefSeq gene 23003 23818 . + . ID=gene-AL60_RS22870;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AL60_RS22870;old_locus_tag=AL60_03543 NZ_KK316858.1 Protein Homology CDS 23003 23818 . + 0 ID=cds-WP_003406919.1;Parent=gene-AL60_RS22870;Dbxref=GenBank:WP_003406919.1;Name=WP_003406919.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215854.1;locus_tag=AL60_RS22870;product=glutamate racemase;protein_id=WP_003406919.1;transl_table=11 NZ_KK316858.1 RefSeq gene 23890 24666 . + . ID=gene-AL60_RS22875;Name=AL60_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22875;old_locus_tag=AL60_03544 NZ_KK316858.1 Protein Homology CDS 23890 24666 . + 0 ID=cds-WP_009936344.1;Parent=gene-AL60_RS22875;Dbxref=GenBank:WP_009936344.1;Name=WP_009936344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936344.1;locus_tag=AL60_RS22875;product=cyclic nucleotide-degrading phosphodiesterase;protein_id=WP_009936344.1;transl_table=11 NZ_KK316858.1 RefSeq gene 24683 25462 . + . ID=gene-AL60_RS22880;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AL60_RS22880;old_locus_tag=AL60_03545 NZ_KK316858.1 Protein Homology CDS 24683 25462 . + 0 ID=cds-WP_003406926.1;Parent=gene-AL60_RS22880;Dbxref=GenBank:WP_003406926.1;Name=WP_003406926.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215856.1;locus_tag=AL60_RS22880;product=ribonuclease PH;protein_id=WP_003406926.1;transl_table=11 NZ_KK316858.1 RefSeq gene 25501 26115 . + . ID=gene-AL60_RS22885;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=AL60_RS22885;old_locus_tag=AL60_03546 NZ_KK316858.1 Protein Homology CDS 25501 26115 . + 0 ID=cds-WP_003406931.1;Parent=gene-AL60_RS22885;Dbxref=GenBank:WP_003406931.1;Name=WP_003406931.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215857.1;locus_tag=AL60_RS22885;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_003406931.1;transl_table=11 NZ_KK316858.1 RefSeq gene 26112 26474 . - . ID=gene-AL60_RS22890;Name=AL60_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22890;old_locus_tag=AL60_03547 NZ_KK316858.1 Protein Homology CDS 26112 26474 . - 0 ID=cds-WP_003406937.1;Parent=gene-AL60_RS22890;Dbxref=GenBank:WP_003406937.1;Name=WP_003406937.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177800.1;locus_tag=AL60_RS22890;product=DUF3817 domain-containing protein;protein_id=WP_003406937.1;transl_table=11 NZ_KK316858.1 RefSeq gene 26471 26851 . - . ID=gene-AL60_RS22895;Name=AL60_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22895;old_locus_tag=AL60_03548 NZ_KK316858.1 Protein Homology CDS 26471 26851 . - 0 ID=cds-WP_003898833.1;Parent=gene-AL60_RS22895;Dbxref=GenBank:WP_003898833.1;Name=WP_003898833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215859.1;locus_tag=AL60_RS22895;product=hypothetical protein;protein_id=WP_003898833.1;transl_table=11 NZ_KK316858.1 RefSeq gene 26962 27216 . + . ID=gene-AL60_RS0105355;Name=AL60_RS0105355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105355;old_locus_tag=AL60_03549 NZ_KK316858.1 Protein Homology CDS 26962 27216 . + 0 ID=cds-WP_003911484.1;Parent=gene-AL60_RS0105355;Dbxref=GenBank:WP_003911484.1;Name=WP_003911484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911484.1;locus_tag=AL60_RS0105355;product=acyl carrier protein;protein_id=WP_003911484.1;transl_table=11 NZ_KK316858.1 RefSeq gene 27209 28774 . + . ID=gene-AL60_RS22900;Name=mbtM;gbkey=Gene;gene=mbtM;gene_biotype=protein_coding;locus_tag=AL60_RS22900;old_locus_tag=AL60_03550 NZ_KK316858.1 Protein Homology CDS 27209 28774 . + 0 ID=cds-WP_003406950.1;Parent=gene-AL60_RS22900;Dbxref=GenBank:WP_003406950.1;Name=WP_003406950.1;gbkey=CDS;gene=mbtM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215861.1;locus_tag=AL60_RS22900;product=long-chain-fatty acid--ACP ligase MbtM;protein_id=WP_003406950.1;transl_table=11 NZ_KK316858.1 RefSeq gene 28774 29934 . + . ID=gene-AL60_RS22905;Name=mbtN;gbkey=Gene;gene=mbtN;gene_biotype=protein_coding;locus_tag=AL60_RS22905;old_locus_tag=AL60_03551 NZ_KK316858.1 Protein Homology CDS 28774 29934 . + 0 ID=cds-WP_003406953.1;Parent=gene-AL60_RS22905;Dbxref=GenBank:WP_003406953.1;Name=WP_003406953.1;gbkey=CDS;gene=mbtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215862.1;locus_tag=AL60_RS22905;product=acyl-ACP dehydrogenase MbtN;protein_id=WP_003406953.1;transl_table=11 NZ_KK316858.1 RefSeq gene 29901 30533 . - . ID=gene-AL60_RS22910;Name=mbtK;gbkey=Gene;gene=mbtK;gene_biotype=protein_coding;locus_tag=AL60_RS22910;old_locus_tag=AL60_03552 NZ_KK316858.1 Protein Homology CDS 29901 30533 . - 0 ID=cds-WP_003906584.1;Parent=gene-AL60_RS22910;Dbxref=GenBank:WP_003906584.1;Name=WP_003906584.1;gbkey=CDS;gene=mbtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215863.1;locus_tag=AL60_RS22910;product=lysine N-acyltransferase MbtK;protein_id=WP_003906584.1;transl_table=11 NZ_KK316858.1 RefSeq gene 30656 30739 . + . ID=gene-AL60_RS22915;Name=AL60_RS22915;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS22915;old_locus_tag=AL60_03553 NZ_KK316858.1 tRNAscan-SE tRNA 30656 30739 . + . ID=rna-AL60_RS22915;Parent=gene-AL60_RS22915;anticodon=(pos:30690..30692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS22915;product=tRNA-Leu NZ_KK316858.1 tRNAscan-SE exon 30656 30739 . + . ID=exon-AL60_RS22915-1;Parent=rna-AL60_RS22915;anticodon=(pos:30690..30692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS22915;product=tRNA-Leu NZ_KK316858.1 RefSeq gene 30975 33554 . + . ID=gene-AL60_RS22920;Name=irtA;gbkey=Gene;gene=irtA;gene_biotype=protein_coding;locus_tag=AL60_RS22920;old_locus_tag=AL60_03554 NZ_KK316858.1 Protein Homology CDS 30975 33554 . + 0 ID=cds-WP_003406958.1;Parent=gene-AL60_RS22920;Dbxref=GenBank:WP_003406958.1;Name=WP_003406958.1;gbkey=CDS;gene=irtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215864.1;locus_tag=AL60_RS22920;product=iron ABC transporter ATP-binding protein/permease IrtA;protein_id=WP_003406958.1;transl_table=11 NZ_KK316858.1 RefSeq gene 33551 35290 . + . ID=gene-AL60_RS22925;Name=irtB;gbkey=Gene;gene=irtB;gene_biotype=protein_coding;locus_tag=AL60_RS22925;old_locus_tag=AL60_03555 NZ_KK316858.1 Protein Homology CDS 33551 35290 . + 0 ID=cds-WP_003900322.1;Parent=gene-AL60_RS22925;Dbxref=GenBank:WP_003900322.1;Name=WP_003900322.1;gbkey=CDS;gene=irtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215865.1;locus_tag=AL60_RS22925;product=iron ABC transporter ATP-binding protein/permease IrtB;protein_id=WP_003900322.1;transl_table=11 NZ_KK316858.1 RefSeq pseudogene 35283 35453 . - . ID=gene-AL60_RS26465;Name=AL60_RS26465;end_range=35453,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26465;partial=true;pseudo=true;start_range=.,35283 NZ_KK316858.1 Protein Homology CDS 35283 35453 . - 0 ID=cds-AL60_RS26465;Parent=gene-AL60_RS26465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016627;end_range=35453,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009952867.1;locus_tag=AL60_RS26465;partial=true;product=acyl-CoA dehydrogenase family protein;pseudo=true;start_range=.,35283;transl_table=11 NZ_KK316858.1 RefSeq gene 35419 36162 . + . ID=gene-AL60_RS22930;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AL60_RS22930;old_locus_tag=AL60_03556 NZ_KK316858.1 Protein Homology CDS 35419 36162 . + 0 ID=cds-WP_003406963.1;Parent=gene-AL60_RS22930;Dbxref=GenBank:WP_003406963.1;Name=WP_003406963.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215866.1;locus_tag=AL60_RS22930;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_003406963.1;transl_table=11 NZ_KK316858.1 RefSeq pseudogene 36173 36235 . + . ID=gene-AL60_RS28010;Name=AL60_RS28010;end_range=36235,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28010;partial=true;pseudo=true NZ_KK316858.1 Protein Homology CDS 36173 36235 . + 0 ID=cds-AL60_RS28010;Parent=gene-AL60_RS28010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=36235,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014790.6;locus_tag=AL60_RS28010;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316858.1 RefSeq gene 36216 36488 . + . ID=gene-AL60_RS22935;Name=AL60_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22935;old_locus_tag=AL60_03557 NZ_KK316858.1 Protein Homology CDS 36216 36488 . + 0 ID=cds-WP_003918231.1;Parent=gene-AL60_RS22935;Dbxref=GenBank:WP_003918231.1;Name=WP_003918231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918231.1;locus_tag=AL60_RS22935;product=hypothetical protein;protein_id=WP_003918231.1;transl_table=11 NZ_KK316858.1 RefSeq gene 36691 37062 . + . ID=gene-AL60_RS22940;Name=AL60_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22940;old_locus_tag=AL60_03558 NZ_KK316858.1 Protein Homology CDS 36691 37062 . + 0 ID=cds-WP_003406967.1;Parent=gene-AL60_RS22940;Dbxref=GenBank:WP_003406967.1;Name=WP_003406967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215868.1;locus_tag=AL60_RS22940;product=hypothetical protein;protein_id=WP_003406967.1;transl_table=11 NZ_KK316858.1 RefSeq gene 37128 37913 . - . ID=gene-AL60_RS22945;Name=AL60_RS22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22945;old_locus_tag=AL60_03559 NZ_KK316858.1 Protein Homology CDS 37128 37913 . - 0 ID=cds-WP_003898836.1;Parent=gene-AL60_RS22945;Dbxref=GenBank:WP_003898836.1;Name=WP_003898836.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215869.1;locus_tag=AL60_RS22945;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003898836.1;transl_table=11 NZ_KK316858.1 RefSeq gene 37933 39804 . - . ID=gene-AL60_RS22950;Name=AL60_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22950;old_locus_tag=AL60_03560 NZ_KK316858.1 Protein Homology CDS 37933 39804 . - 0 ID=cds-WP_003898837.1;Parent=gene-AL60_RS22950;Dbxref=GenBank:WP_003898837.1;Name=WP_003898837.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215870.1;locus_tag=AL60_RS22950;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_003898837.1;transl_table=11 NZ_KK316858.1 RefSeq gene 39813 41960 . - . ID=gene-AL60_RS22955;Name=moeY;gbkey=Gene;gene=moeY;gene_biotype=protein_coding;locus_tag=AL60_RS22955;old_locus_tag=AL60_03561 NZ_KK316858.1 Protein Homology CDS 39813 41960 . - 0 ID=cds-WP_003898838.1;Parent=gene-AL60_RS22955;Dbxref=GenBank:WP_003898838.1;Name=WP_003898838.1;Ontology_term=GO:0016491;gbkey=CDS;gene=moeY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215871.1;locus_tag=AL60_RS22955;product=Rv1355c family protein;protein_id=WP_003898838.1;transl_table=11 NZ_KK316858.1 RefSeq gene 41957 42712 . - . ID=gene-AL60_RS22960;Name=AL60_RS22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22960;old_locus_tag=AL60_03562 NZ_KK316858.1 Protein Homology CDS 41957 42712 . - 0 ID=cds-WP_003911502.1;Parent=gene-AL60_RS22960;Dbxref=GenBank:WP_003911502.1;Name=WP_003911502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911502.1;locus_tag=AL60_RS22960;product=hypothetical protein;protein_id=WP_003911502.1;transl_table=11 NZ_KK316858.1 RefSeq gene 43221 44144 . - . ID=gene-AL60_RS22965;Name=AL60_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22965;old_locus_tag=AL60_03563 NZ_KK316858.1 Protein Homology CDS 43221 44144 . - 0 ID=cds-WP_003406987.1;Parent=gene-AL60_RS22965;Dbxref=GenBank:WP_003406987.1;Name=WP_003406987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215873.1;locus_tag=AL60_RS22965;product=cyclic diguanylate phosphodiesterase;protein_id=WP_003406987.1;transl_table=11 NZ_KK316858.1 RefSeq gene 44164 44304 . - . ID=gene-AL60_RS27245;Name=AL60_RS27245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27245 NZ_KK316858.1 Protein Homology CDS 44164 44304 . - 0 ID=cds-WP_003406990.1;Parent=gene-AL60_RS27245;Dbxref=GenBank:WP_003406990.1;Name=WP_003406990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940161.1;locus_tag=AL60_RS27245;product=hypothetical protein;protein_id=WP_003406990.1;transl_table=11 NZ_KK316858.1 RefSeq pseudogene 44540 48020 . + . ID=gene-AL60_RS0105365;Name=AL60_RS0105365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0105365;old_locus_tag=AL60_03564;pseudo=true NZ_KK316858.1 Protein Homology CDS 44540 48020 . + 0 ID=cds-AL60_RS0105365;Parent=gene-AL60_RS0105365;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215874.1;locus_tag=AL60_RS0105365;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 NZ_KK316858.1 RefSeq gene 48216 48854 . + . ID=gene-AL60_RS22970;Name=AL60_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22970;old_locus_tag=AL60_03565 NZ_KK316858.1 GeneMarkS-2+ CDS 48216 48854 . + 0 ID=cds-WP_194164305.1;Parent=gene-AL60_RS22970;Dbxref=GenBank:WP_194164305.1;Name=WP_194164305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS22970;product=nucleotidyl cyclase domain-containing protein;protein_id=WP_194164305.1;transl_table=11 NZ_KK316858.1 RefSeq gene 48902 49138 . - . ID=gene-AL60_RS22975;Name=AL60_RS22975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22975 NZ_KK316858.1 Protein Homology CDS 48902 49138 . - 0 ID=cds-WP_003407054.1;Parent=gene-AL60_RS22975;Dbxref=GenBank:WP_003407054.1;Name=WP_003407054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627344.1;locus_tag=AL60_RS22975;product=hypothetical protein;protein_id=WP_003407054.1;transl_table=11 NZ_KK316858.1 RefSeq gene 49277 50299 . + . ID=gene-AL60_RS22980;Name=AL60_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22980;old_locus_tag=AL60_03566 NZ_KK316858.1 Protein Homology CDS 49277 50299 . + 0 ID=cds-WP_003898842.1;Parent=gene-AL60_RS22980;Dbxref=GenBank:WP_003898842.1;Name=WP_003898842.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215876.1;locus_tag=AL60_RS22980;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003898842.1;transl_table=11 NZ_KK316858.1 RefSeq gene 50372 51562 . - . ID=gene-AL60_RS22985;Name=AL60_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22985;old_locus_tag=AL60_03567 NZ_KK316858.1 Protein Homology CDS 50372 51562 . - 0 ID=cds-WP_023637388.1;Parent=gene-AL60_RS22985;Dbxref=GenBank:WP_023637388.1;Name=WP_023637388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177801.1;locus_tag=AL60_RS22985;product=PPE family protein PPE19;protein_id=WP_023637388.1;transl_table=11 NZ_KK316858.1 RefSeq gene 51877 52539 . - . ID=gene-AL60_RS22990;Name=AL60_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22990;old_locus_tag=AL60_03568 NZ_KK316858.1 Protein Homology CDS 51877 52539 . - 0 ID=cds-WP_003407152.1;Parent=gene-AL60_RS22990;Dbxref=GenBank:WP_003407152.1;Name=WP_003407152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215878.1;locus_tag=AL60_RS22990;product=membrane protein;protein_id=WP_003407152.1;transl_table=11 NZ_KK316858.1 RefSeq gene 52536 53321 . - . ID=gene-AL60_RS22995;Name=AL60_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS22995;old_locus_tag=AL60_03569 NZ_KK316858.1 Protein Homology CDS 52536 53321 . - 0 ID=cds-WP_003407157.1;Parent=gene-AL60_RS22995;Dbxref=GenBank:WP_003407157.1;Name=WP_003407157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215879.1;locus_tag=AL60_RS22995;product=membrane protein;protein_id=WP_003407157.1;transl_table=11 NZ_KK316858.1 RefSeq gene 53612 55573 . - . ID=gene-AL60_RS23000;Name=AL60_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23000;old_locus_tag=AL60_03570 NZ_KK316858.1 Protein Homology CDS 53612 55573 . - 0 ID=cds-WP_003407159.1;Parent=gene-AL60_RS23000;Dbxref=GenBank:WP_003407159.1;Name=WP_003407159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177802.1;locus_tag=AL60_RS23000;product=sigma-F factor regulator;protein_id=WP_003407159.1;transl_table=11 NZ_KK316858.1 RefSeq gene 55712 56098 . - . ID=gene-AL60_RS23005;Name=rsfA;gbkey=Gene;gene=rsfA;gene_biotype=protein_coding;locus_tag=AL60_RS23005;old_locus_tag=AL60_03571 NZ_KK316858.1 Protein Homology CDS 55712 56098 . - 0 ID=cds-WP_003898845.1;Parent=gene-AL60_RS23005;Dbxref=GenBank:WP_003898845.1;Name=WP_003898845.1;gbkey=CDS;gene=rsfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215881.1;locus_tag=AL60_RS23005;product=anti-sigma-F factor antagonist RsfA;protein_id=WP_003898845.1;transl_table=11 NZ_KK316858.1 RefSeq gene 56319 57140 . + . ID=gene-AL60_RS23010;Name=AL60_RS23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23010;old_locus_tag=AL60_03572 NZ_KK316858.1 Protein Homology CDS 56319 57140 . + 0 ID=cds-WP_003407164.1;Parent=gene-AL60_RS23010;Dbxref=GenBank:WP_003407164.1;Name=WP_003407164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215882.1;locus_tag=AL60_RS23010;product=GTP pyrophosphokinase;protein_id=WP_003407164.1;transl_table=11 NZ_KK316858.1 RefSeq gene 57133 57369 . + . ID=gene-AL60_RS23015;Name=AL60_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23015;old_locus_tag=AL60_03573 NZ_KK316858.1 Protein Homology CDS 57133 57369 . + 0 ID=cds-WP_003407167.1;Parent=gene-AL60_RS23015;Dbxref=GenBank:WP_003407167.1;Name=WP_003407167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003407167.1;locus_tag=AL60_RS23015;product=hypothetical protein;protein_id=WP_003407167.1;transl_table=11 NZ_KK316858.1 RefSeq gene 57441 58646 . - . ID=gene-AL60_RS23020;Name=AL60_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23020;old_locus_tag=AL60_03574 NZ_KK316858.1 Protein Homology CDS 57441 58646 . - 0 ID=cds-WP_003898846.1;Parent=gene-AL60_RS23020;Dbxref=GenBank:WP_003898846.1;Name=WP_003898846.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355830.1;locus_tag=AL60_RS23020;product=serine hydrolase domain-containing protein;protein_id=WP_003898846.1;transl_table=11 NZ_KK316858.1 RefSeq gene 58949 59734 . + . ID=gene-AL60_RS23025;Name=lprF;gbkey=Gene;gene=lprF;gene_biotype=protein_coding;locus_tag=AL60_RS23025;old_locus_tag=AL60_03575 NZ_KK316858.1 Protein Homology CDS 58949 59734 . + 0 ID=cds-WP_003407180.1;Parent=gene-AL60_RS23025;Dbxref=GenBank:WP_003407180.1;Name=WP_003407180.1;gbkey=CDS;gene=lprF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215884.1;locus_tag=AL60_RS23025;product=lipoprotein LprF;protein_id=WP_003407180.1;transl_table=11 NZ_KK316858.1 RefSeq gene 59930 61399 . + . ID=gene-AL60_RS23030;Name=AL60_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23030;old_locus_tag=AL60_03576 NZ_KK316858.1 Protein Homology CDS 59930 61399 . + 0 ID=cds-WP_003900326.1;Parent=gene-AL60_RS23030;Dbxref=GenBank:WP_003900326.1;Name=WP_003900326.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215887.1;locus_tag=AL60_RS23030;product=fatty acid desaturase;protein_id=WP_003900326.1;transl_table=11 NZ_KK316858.1 RefSeq gene 61396 62577 . + . ID=gene-AL60_RS23035;Name=AL60_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23035;old_locus_tag=AL60_03577 NZ_KK316858.1 Protein Homology CDS 61396 62577 . + 0 ID=cds-WP_003407185.1;Parent=gene-AL60_RS23035;Dbxref=GenBank:WP_003407185.1;Name=WP_003407185.1;Ontology_term=GO:0030639,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177803.1;locus_tag=AL60_RS23035;product=type III polyketide synthase;protein_id=WP_003407185.1;transl_table=11 NZ_KK316858.1 RefSeq gene 62583 63563 . + . ID=gene-AL60_RS23040;Name=AL60_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23040;old_locus_tag=AL60_03578 NZ_KK316858.1 Protein Homology CDS 62583 63563 . + 0 ID=cds-WP_003898849.1;Parent=gene-AL60_RS23040;Dbxref=GenBank:WP_003898849.1;Name=WP_003898849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215889.1;locus_tag=AL60_RS23040;product=glycolipid sulfotransferase;protein_id=WP_003898849.1;transl_table=11 NZ_KK316858.1 RefSeq gene 63643 64101 . - . ID=gene-AL60_RS23045;Name=AL60_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23045;old_locus_tag=AL60_03579 NZ_KK316858.1 Protein Homology CDS 63643 64101 . - 0 ID=cds-WP_003901145.1;Parent=gene-AL60_RS23045;Dbxref=GenBank:WP_003901145.1;Name=WP_003901145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215890.2;locus_tag=AL60_RS23045;product=hypothetical protein;protein_id=WP_003901145.1;transl_table=11 NZ_KK316858.1 RefSeq gene 64403 65722 . + . ID=gene-AL60_RS23050;Name=AL60_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23050;old_locus_tag=AL60_03580 NZ_KK316858.1 Protein Homology CDS 64403 65722 . + 0 ID=cds-WP_003898850.1;Parent=gene-AL60_RS23050;Dbxref=GenBank:WP_003898850.1;Name=WP_003898850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215891.1;locus_tag=AL60_RS23050;product=YcaO-like family protein;protein_id=WP_003898850.1;transl_table=11 NZ_KK316858.1 RefSeq gene 65719 67212 . + . ID=gene-AL60_RS23055;Name=AL60_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23055;old_locus_tag=AL60_03581 NZ_KK316858.1 Protein Homology CDS 65719 67212 . + 0 ID=cds-WP_003900327.1;Parent=gene-AL60_RS23055;Dbxref=GenBank:WP_003900327.1;Name=WP_003900327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215892.1;locus_tag=AL60_RS23055;product=TfuA-like protein;protein_id=WP_003900327.1;transl_table=11 NZ_KK316858.1 RefSeq gene 67150 67788 . - . ID=gene-AL60_RS23060;Name=AL60_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23060;old_locus_tag=AL60_03582 NZ_KK316858.1 Protein Homology CDS 67150 67788 . - 0 ID=cds-WP_003898852.1;Parent=gene-AL60_RS23060;Dbxref=GenBank:WP_003898852.1;Name=WP_003898852.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215893.1;locus_tag=AL60_RS23060;product=class I SAM-dependent methyltransferase;protein_id=WP_003898852.1;transl_table=11 NZ_KK316858.1 RefSeq gene 67799 69088 . - . ID=gene-AL60_RS23065;Name=AL60_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23065;old_locus_tag=AL60_03583 NZ_KK316858.1 Protein Homology CDS 67799 69088 . - 0 ID=cds-WP_003911527.1;Parent=gene-AL60_RS23065;Dbxref=GenBank:WP_003911527.1;Name=WP_003911527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911527.1;locus_tag=AL60_RS23065;product=HNH endonuclease;protein_id=WP_003911527.1;transl_table=11 NZ_KK316858.1 RefSeq gene 69225 69806 . + . ID=gene-AL60_RS23070;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=AL60_RS23070;old_locus_tag=AL60_03584 NZ_KK316858.1 Protein Homology CDS 69225 69806 . + 0 ID=cds-WP_003407196.1;Parent=gene-AL60_RS23070;Dbxref=GenBank:WP_003407196.1;Name=WP_003407196.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215895.1;locus_tag=AL60_RS23070;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_003407196.1;transl_table=11 NZ_KK316858.1 RefSeq gene 69803 70762 . + . ID=gene-AL60_RS23075;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AL60_RS23075;old_locus_tag=AL60_03585 NZ_KK316858.1 Protein Homology CDS 69803 70762 . + 0 ID=cds-WP_003407200.1;Parent=gene-AL60_RS23075;Dbxref=GenBank:WP_003407200.1;Name=WP_003407200.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215896.1;locus_tag=AL60_RS23075;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_003407200.1;transl_table=11 NZ_KK316858.1 RefSeq gene 70759 72051 . + . ID=gene-AL60_RS23080;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=AL60_RS23080;old_locus_tag=AL60_03586 NZ_KK316858.1 Protein Homology CDS 70759 72051 . + 0 ID=cds-WP_003407204.1;Parent=gene-AL60_RS23080;Dbxref=GenBank:WP_003407204.1;Name=WP_003407204.1;gbkey=CDS;gene=pyrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215897.1;locus_tag=AL60_RS23080;product=dihydroorotase;protein_id=WP_003407204.1;transl_table=11 NZ_KK316858.1 RefSeq gene 72048 72545 . + . ID=gene-AL60_RS23085;Name=AL60_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23085;old_locus_tag=AL60_03587 NZ_KK316858.1 Protein Homology CDS 72048 72545 . + 0 ID=cds-WP_003898853.1;Parent=gene-AL60_RS23085;Dbxref=GenBank:WP_003898853.1;Name=WP_003898853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215898.1;locus_tag=AL60_RS23085;product=PH-like domain-containing protein;protein_id=WP_003898853.1;transl_table=11 NZ_KK316858.1 RefSeq gene 72542 73672 . + . ID=gene-AL60_RS23090;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=AL60_RS23090;old_locus_tag=AL60_03588 NZ_KK316858.1 Protein Homology CDS 72542 73672 . + 0 ID=cds-WP_003407208.1;Parent=gene-AL60_RS23090;Dbxref=GenBank:WP_003407208.1;Name=WP_003407208.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215899.1;locus_tag=AL60_RS23090;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_003407208.1;transl_table=11 NZ_KK316858.1 RefSeq gene 73672 77019 . + . ID=gene-AL60_RS23095;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AL60_RS23095;old_locus_tag=AL60_03589 NZ_KK316858.1 Protein Homology CDS 73672 77019 . + 0 ID=cds-WP_003898855.1;Parent=gene-AL60_RS23095;Dbxref=GenBank:WP_003898855.1;Name=WP_003898855.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177804.1;locus_tag=AL60_RS23095;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_003898855.1;transl_table=11 NZ_KK316858.1 RefSeq gene 77016 77840 . + . ID=gene-AL60_RS23100;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AL60_RS23100;old_locus_tag=AL60_03590 NZ_KK316858.1 Protein Homology CDS 77016 77840 . + 0 ID=cds-WP_003407220.1;Parent=gene-AL60_RS23100;Dbxref=GenBank:WP_003407220.1;Name=WP_003407220.1;Ontology_term=GO:0006221,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215901.1;locus_tag=AL60_RS23100;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_003407220.1;transl_table=11 NZ_KK316858.1 RefSeq gene 78035 78343 . + . ID=gene-AL60_RS23105;Name=AL60_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23105;old_locus_tag=AL60_03591 NZ_KK316858.1 Protein Homology CDS 78035 78343 . + 0 ID=cds-WP_003407225.1;Parent=gene-AL60_RS23105;Dbxref=GenBank:WP_003407225.1;Name=WP_003407225.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177805.1;locus_tag=AL60_RS23105;product=PE family protein;protein_id=WP_003407225.1;transl_table=11 NZ_KK316858.1 RefSeq gene 78340 79959 . + . ID=gene-AL60_RS23110;Name=AL60_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23110;old_locus_tag=AL60_03592 NZ_KK316858.1 Protein Homology CDS 78340 79959 . + 0 ID=cds-WP_003407230.1;Parent=gene-AL60_RS23110;Dbxref=GenBank:WP_003407230.1;Name=WP_003407230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177806.1;locus_tag=AL60_RS23110;product=PPE family protein;protein_id=WP_003407230.1;transl_table=11 NZ_KK316858.1 RefSeq gene 80520 80837 . + . ID=gene-AL60_RS26955;Name=mihF;gbkey=Gene;gene=mihF;gene_biotype=protein_coding;locus_tag=AL60_RS26955 NZ_KK316858.1 Protein Homology CDS 80520 80837 . + 0 ID=cds-WP_003407240.1;Parent=gene-AL60_RS26955;Dbxref=GenBank:WP_003407240.1;Name=WP_003407240.1;gbkey=CDS;gene=mihF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010907783.1;locus_tag=AL60_RS26955;product=integration host factor%2C actinobacterial type;protein_id=WP_003407240.1;transl_table=11 NZ_KK316858.1 RefSeq gene 80972 81598 . + . ID=gene-AL60_RS23115;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=AL60_RS23115;old_locus_tag=AL60_03594 NZ_KK316858.1 Protein Homology CDS 80972 81598 . + 0 ID=cds-WP_003900331.1;Parent=gene-AL60_RS23115;Dbxref=GenBank:WP_003900331.1;Name=WP_003900331.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215905.1;locus_tag=AL60_RS23115;product=guanylate kinase;protein_id=WP_003900331.1;transl_table=11 NZ_KK316858.1 RefSeq gene 81664 81996 . + . ID=gene-AL60_RS23120;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AL60_RS23120;old_locus_tag=AL60_03595 NZ_KK316858.1 Protein Homology CDS 81664 81996 . + 0 ID=cds-WP_003407248.1;Parent=gene-AL60_RS23120;Dbxref=GenBank:WP_003407248.1;Name=WP_003407248.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215906.1;locus_tag=AL60_RS23120;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_003407248.1;transl_table=11 NZ_KK316858.1 RefSeq gene 82012 83268 . + . ID=gene-AL60_RS23125;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AL60_RS23125;old_locus_tag=AL60_03596 NZ_KK316858.1 Protein Homology CDS 82012 83268 . + 0 ID=cds-WP_003898859.1;Parent=gene-AL60_RS23125;Dbxref=GenBank:WP_003898859.1;Name=WP_003898859.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215907.1;locus_tag=AL60_RS23125;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_003898859.1;transl_table=11 NZ_KK316858.1 RefSeq gene 83396 84607 . + . ID=gene-AL60_RS23130;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AL60_RS23130;old_locus_tag=AL60_03597 NZ_KK316858.1 Protein Homology CDS 83396 84607 . + 0 ID=cds-WP_003900333.1;Parent=gene-AL60_RS23130;Dbxref=GenBank:WP_003900333.1;Name=WP_003900333.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012393969.1;locus_tag=AL60_RS23130;product=methionine adenosyltransferase;protein_id=WP_003900333.1;transl_table=11 NZ_KK316858.1 RefSeq gene 84680 86158 . - . ID=gene-AL60_RS23135;Name=AL60_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23135;old_locus_tag=AL60_03598 NZ_KK316858.1 Protein Homology CDS 84680 86158 . - 0 ID=cds-WP_003407257.1;Parent=gene-AL60_RS23135;Dbxref=GenBank:WP_003407257.1;Name=WP_003407257.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215909.1;locus_tag=AL60_RS23135;product=flavin-containing monooxygenase;protein_id=WP_003407257.1;transl_table=11 NZ_KK316858.1 RefSeq gene 86155 87540 . - . ID=gene-AL60_RS23140;Name=AL60_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23140;old_locus_tag=AL60_03599 NZ_KK316858.1 Protein Homology CDS 86155 87540 . - 0 ID=cds-WP_003407260.1;Parent=gene-AL60_RS23140;Dbxref=GenBank:WP_003407260.1;Name=WP_003407260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177807.1;locus_tag=AL60_RS23140;product=cytochrome P450;protein_id=WP_003407260.1;transl_table=11 NZ_KK316858.1 RefSeq gene 87618 88652 . + . ID=gene-AL60_RS23145;Name=AL60_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23145;old_locus_tag=AL60_03600 NZ_KK316858.1 Protein Homology CDS 87618 88652 . + 0 ID=cds-WP_003407264.1;Parent=gene-AL60_RS23145;Dbxref=GenBank:WP_003407264.1;Name=WP_003407264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177808.1;locus_tag=AL60_RS23145;product=AraC family transcriptional regulator;protein_id=WP_003407264.1;transl_table=11 NZ_KK316858.1 RefSeq gene 88698 90428 . - . ID=gene-AL60_RS23150;Name=AL60_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23150;old_locus_tag=AL60_03601 NZ_KK316858.1 Protein Homology CDS 88698 90428 . - 0 ID=cds-WP_009940170.1;Parent=gene-AL60_RS23150;Dbxref=GenBank:WP_009940170.1;Name=WP_009940170.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177809.1;locus_tag=AL60_RS23150;product=PE family protein;protein_id=WP_009940170.1;transl_table=11 NZ_KK316858.1 RefSeq gene 90683 91084 . - . ID=gene-AL60_RS23155;Name=AL60_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23155;old_locus_tag=AL60_03602 NZ_KK316858.1 Protein Homology CDS 90683 91084 . - 0 ID=cds-WP_003898861.1;Parent=gene-AL60_RS23155;Dbxref=GenBank:WP_003898861.1;Name=WP_003898861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215913.1;locus_tag=AL60_RS23155;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003898861.1;transl_table=11 NZ_KK316858.1 RefSeq gene 91081 91338 . - . ID=gene-AL60_RS23160;Name=AL60_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23160;old_locus_tag=AL60_03603 NZ_KK316858.1 Protein Homology CDS 91081 91338 . - 0 ID=cds-WP_003407272.1;Parent=gene-AL60_RS23160;Dbxref=GenBank:WP_003407272.1;Name=WP_003407272.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215914.1;locus_tag=AL60_RS23160;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003407272.1;transl_table=11 NZ_KK316858.1 RefSeq gene 91421 92380 . - . ID=gene-AL60_RS23165;Name=nlhH;gbkey=Gene;gene=nlhH;gene_biotype=protein_coding;locus_tag=AL60_RS23165;old_locus_tag=AL60_03604 NZ_KK316858.1 Protein Homology CDS 91421 92380 . - 0 ID=cds-WP_003407276.1;Parent=gene-AL60_RS23165;Dbxref=GenBank:WP_003407276.1;Name=WP_003407276.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nlhH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215915.1;locus_tag=AL60_RS23165;product=alpha/beta hydrolase;protein_id=WP_003407276.1;transl_table=11 NZ_KK316858.1 RefSeq gene 92405 93367 . - . ID=gene-AL60_RS23170;Name=lipI;gbkey=Gene;gene=lipI;gene_biotype=protein_coding;locus_tag=AL60_RS23170;old_locus_tag=AL60_03605 NZ_KK316858.1 Protein Homology CDS 92405 93367 . - 0 ID=cds-WP_003407279.1;Parent=gene-AL60_RS23170;Dbxref=GenBank:WP_003407279.1;Name=WP_003407279.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipI;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215916.1;locus_tag=AL60_RS23170;product=alpha/beta hydrolase;protein_id=WP_003407279.1;transl_table=11 NZ_KK316858.1 RefSeq gene 93318 94103 . + . ID=gene-AL60_RS23175;Name=AL60_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23175;old_locus_tag=AL60_03606 NZ_KK316858.1 Protein Homology CDS 93318 94103 . + 0 ID=cds-WP_003898862.1;Parent=gene-AL60_RS23175;Dbxref=GenBank:WP_003898862.1;Name=WP_003898862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898862.1;locus_tag=AL60_RS23175;product=lysoplasmalogenase;protein_id=WP_003898862.1;transl_table=11 NZ_KK316858.1 RefSeq gene 94184 96151 . + . ID=gene-AL60_RS23180;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AL60_RS23180;old_locus_tag=AL60_03607 NZ_KK316858.1 Protein Homology CDS 94184 96151 . + 0 ID=cds-WP_003407285.1;Parent=gene-AL60_RS23180;Dbxref=GenBank:WP_003407285.1;Name=WP_003407285.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013829229.1;locus_tag=AL60_RS23180;product=primosomal protein N';protein_id=WP_003407285.1;transl_table=11 NZ_KK316858.1 RefSeq gene 96169 96993 . - . ID=gene-AL60_RS23185;Name=AL60_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23185;old_locus_tag=AL60_03608 NZ_KK316858.1 Protein Homology CDS 96169 96993 . - 0 ID=cds-WP_003407292.1;Parent=gene-AL60_RS23185;Dbxref=GenBank:WP_003407292.1;Name=WP_003407292.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215919.1;locus_tag=AL60_RS23185;product=class I SAM-dependent methyltransferase;protein_id=WP_003407292.1;transl_table=11 NZ_KK316858.1 RefSeq gene 97162 97644 . + . ID=gene-AL60_RS23190;Name=AL60_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23190;old_locus_tag=AL60_03609 NZ_KK316858.1 Protein Homology CDS 97162 97644 . + 0 ID=cds-WP_003407295.1;Parent=gene-AL60_RS23190;Dbxref=GenBank:WP_003407295.1;Name=WP_003407295.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215920.1;locus_tag=AL60_RS23190;product=MarR family transcriptional regulator;protein_id=WP_003407295.1;transl_table=11 NZ_KK316858.1 RefSeq gene 97716 98540 . - . ID=gene-AL60_RS23195;Name=AL60_RS23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23195;old_locus_tag=AL60_03610 NZ_KK316858.1 Protein Homology CDS 97716 98540 . - 0 ID=cds-WP_003407297.1;Parent=gene-AL60_RS23195;Dbxref=GenBank:WP_003407297.1;Name=WP_003407297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215921.1;locus_tag=AL60_RS23195;product=virulence-associated methyltransferase;protein_id=WP_003407297.1;transl_table=11 NZ_KK316858.1 RefSeq gene 98737 99675 . + . ID=gene-AL60_RS23200;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AL60_RS23200;old_locus_tag=AL60_03611 NZ_KK316858.1 Protein Homology CDS 98737 99675 . + 0 ID=cds-WP_003900336.1;Parent=gene-AL60_RS23200;Dbxref=GenBank:WP_003900336.1;Name=WP_003900336.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215922.1;locus_tag=AL60_RS23200;product=methionyl-tRNA formyltransferase;protein_id=WP_003900336.1;transl_table=11 NZ_KK316858.1 RefSeq gene 99672 101045 . + . ID=gene-AL60_RS23205;Name=fmu;gbkey=Gene;gene=fmu;gene_biotype=protein_coding;locus_tag=AL60_RS23205;old_locus_tag=AL60_03612 NZ_KK316858.1 Protein Homology CDS 99672 101045 . + 0 ID=cds-WP_003898865.1;Parent=gene-AL60_RS23205;Dbxref=GenBank:WP_003898865.1;Name=WP_003898865.1;gbkey=CDS;gene=fmu;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215923.1;locus_tag=AL60_RS23205;product=RsmB/NOP family class I SAM-dependent RNA methyltransferase;protein_id=WP_003898865.1;transl_table=11 NZ_KK316858.1 RefSeq gene 101070 101768 . + . ID=gene-AL60_RS23210;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AL60_RS23210;old_locus_tag=AL60_03613 NZ_KK316858.1 Protein Homology CDS 101070 101768 . + 0 ID=cds-WP_003901153.1;Parent=gene-AL60_RS23210;Dbxref=GenBank:WP_003901153.1;Name=WP_003901153.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215924.1;locus_tag=AL60_RS23210;product=ribulose-phosphate 3-epimerase;protein_id=WP_003901153.1;transl_table=11 NZ_KK316858.1 RefSeq gene 101765 102784 . + . ID=gene-AL60_RS23215;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AL60_RS23215;old_locus_tag=AL60_03614 NZ_KK316858.1 Protein Homology CDS 101765 102784 . + 0 ID=cds-WP_003898867.1;Parent=gene-AL60_RS23215;Dbxref=GenBank:WP_003898867.1;Name=WP_003898867.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215925.1;locus_tag=AL60_RS23215;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_003898867.1;transl_table=11 NZ_KK316858.1 RefSeq gene 102781 104337 . - . ID=gene-AL60_RS23220;Name=AL60_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23220;old_locus_tag=AL60_03615 NZ_KK316858.1 Protein Homology CDS 102781 104337 . - 0 ID=cds-WP_003407310.1;Parent=gene-AL60_RS23220;Dbxref=GenBank:WP_003407310.1;Name=WP_003407310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215926.1;locus_tag=AL60_RS23220;product=aminoglycoside/tetracycline transporter;protein_id=WP_003407310.1;transl_table=11 NZ_KK316858.1 RefSeq gene 104343 105053 . - . ID=gene-AL60_RS23225;Name=lprG;gbkey=Gene;gene=lprG;gene_biotype=protein_coding;locus_tag=AL60_RS23225;old_locus_tag=AL60_03616 NZ_KK316858.1 Protein Homology CDS 104343 105053 . - 0 ID=cds-WP_003407315.1;Parent=gene-AL60_RS23225;Dbxref=GenBank:WP_003407315.1;Name=WP_003407315.1;gbkey=CDS;gene=lprG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215927.1;locus_tag=AL60_RS23225;product=lipoarabinomannan carrier protein LprG;protein_id=WP_003407315.1;transl_table=11 NZ_KK316858.1 RefSeq gene 105138 105743 . + . ID=gene-AL60_RS23230;Name=ribC;gbkey=Gene;gene=ribC;gene_biotype=protein_coding;locus_tag=AL60_RS23230;old_locus_tag=AL60_03617 NZ_KK316858.1 Protein Homology CDS 105138 105743 . + 0 ID=cds-WP_003407318.1;Parent=gene-AL60_RS23230;Dbxref=GenBank:WP_003407318.1;Name=WP_003407318.1;gbkey=CDS;gene=ribC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215928.1;locus_tag=AL60_RS23230;product=riboflavin synthase;protein_id=WP_003407318.1;transl_table=11 NZ_KK316858.1 RefSeq pseudogene 105770 106863 . + . ID=gene-AL60_RS27250;Name=AL60_RS27250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27250;pseudo=true NZ_KK316858.1 Protein Homology CDS 105770 106863 . + 0 ID=cds-AL60_RS27250;Parent=gene-AL60_RS27250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292928.1;locus_tag=AL60_RS27250;product=alanine racemase;pseudo=true;transl_table=11 NZ_KK316858.1 RefSeq gene 106968 108245 . + . ID=gene-AL60_RS23245;Name=AL60_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23245;old_locus_tag=AL60_03620 NZ_KK316858.1 Protein Homology CDS 106968 108245 . + 0 ID=cds-WP_003407334.1;Parent=gene-AL60_RS23245;Dbxref=GenBank:WP_003407334.1;Name=WP_003407334.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215931.1;locus_tag=AL60_RS23245;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_003407334.1;transl_table=11 NZ_KK316858.1 RefSeq gene 108242 108724 . + . ID=gene-AL60_RS23250;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AL60_RS23250;old_locus_tag=AL60_03621 NZ_KK316858.1 Protein Homology CDS 108242 108724 . + 0 ID=cds-WP_003898872.1;Parent=gene-AL60_RS23250;Dbxref=GenBank:WP_003898872.1;Name=WP_003898872.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215932.2;locus_tag=AL60_RS23250;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_003898872.1;transl_table=11 NZ_KK316858.1 RefSeq gene 108721 109185 . + . ID=gene-AL60_RS23255;Name=AL60_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23255;old_locus_tag=AL60_03622 NZ_KK316858.1 Protein Homology CDS 108721 109185 . + 0 ID=cds-WP_012054272.1;Parent=gene-AL60_RS23255;Dbxref=GenBank:WP_012054272.1;Name=WP_012054272.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215933.1;locus_tag=AL60_RS23255;product=PH domain-containing protein;protein_id=WP_012054272.1;transl_table=11 NZ_KK316858.1 RefSeq gene 109210 109896 . + . ID=gene-AL60_RS23260;Name=AL60_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23260;old_locus_tag=AL60_03623 NZ_KK316858.1 Protein Homology CDS 109210 109896 . + 0 ID=cds-WP_003407343.1;Parent=gene-AL60_RS23260;Dbxref=GenBank:WP_003407343.1;Name=WP_003407343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215934.1;locus_tag=AL60_RS23260;product=hypothetical protein;protein_id=WP_003407343.1;transl_table=11 NZ_KK316858.1 RefSeq gene 110076 110549 . + . ID=gene-AL60_RS23265;Name=AL60_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23265;old_locus_tag=AL60_03624 NZ_KK316858.1 Protein Homology CDS 110076 110549 . + 0 ID=cds-WP_003407345.1;Parent=gene-AL60_RS23265;Dbxref=GenBank:WP_003407345.1;Name=WP_003407345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215935.1;locus_tag=AL60_RS23265;product=lectin;protein_id=WP_003407345.1;transl_table=11 NZ_KK316858.1 RefSeq gene 110613 112553 . + . ID=gene-AL60_RS23270;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AL60_RS23270;old_locus_tag=AL60_03625 NZ_KK316858.1 Protein Homology CDS 110613 112553 . + 0 ID=cds-WP_003407347.1;Parent=gene-AL60_RS23270;Dbxref=GenBank:WP_003407347.1;Name=WP_003407347.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215936.1;locus_tag=AL60_RS23270;product=excinuclease ABC subunit UvrC;protein_id=WP_003407347.1;transl_table=11 NZ_KK316858.1 RefSeq gene 112550 113455 . + . ID=gene-AL60_RS23275;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=AL60_RS23275;old_locus_tag=AL60_03626 NZ_KK316858.1 Protein Homology CDS 112550 113455 . + 0 ID=cds-WP_003898873.1;Parent=gene-AL60_RS23275;Dbxref=GenBank:WP_003898873.1;Name=WP_003898873.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215937.1;locus_tag=AL60_RS23275;product=RNase adapter RapZ;protein_id=WP_003898873.1;transl_table=11 NZ_KK316858.1 RefSeq gene 113452 114480 . + . ID=gene-AL60_RS23280;Name=cuvA;gbkey=Gene;gene=cuvA;gene_biotype=protein_coding;locus_tag=AL60_RS23280;old_locus_tag=AL60_03627 NZ_KK316858.1 Protein Homology CDS 113452 114480 . + 0 ID=cds-WP_003407352.1;Parent=gene-AL60_RS23280;Dbxref=GenBank:WP_003407352.1;Name=WP_003407352.1;gbkey=CDS;gene=cuvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215938.1;locus_tag=AL60_RS23280;product=carbon utilization/virulence protein CuvA;protein_id=WP_003407352.1;transl_table=11 NZ_KK316858.1 RefSeq gene 114477 115454 . + . ID=gene-AL60_RS23285;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=AL60_RS23285;old_locus_tag=AL60_03628 NZ_KK316858.1 Protein Homology CDS 114477 115454 . + 0 ID=cds-WP_003901156.1;Parent=gene-AL60_RS23285;Dbxref=GenBank:WP_003901156.1;Name=WP_003901156.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215939.1;locus_tag=AL60_RS23285;product=DNA-binding protein WhiA;protein_id=WP_003901156.1;transl_table=11 NZ_KK316858.1 RefSeq gene 115464 116225 . - . ID=gene-AL60_RS23290;Name=AL60_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23290;old_locus_tag=AL60_03629 NZ_KK316858.1 Protein Homology CDS 115464 116225 . - 0 ID=cds-WP_003407359.1;Parent=gene-AL60_RS23290;Dbxref=GenBank:WP_003407359.1;Name=WP_003407359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215940.1;locus_tag=AL60_RS23290;product=membrane protein;protein_id=WP_003407359.1;transl_table=11 NZ_KK316858.1 RefSeq gene 116229 117608 . + . ID=gene-AL60_RS23295;Name=AL60_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23295;old_locus_tag=AL60_03630 NZ_KK316858.1 Protein Homology CDS 116229 117608 . + 0 ID=cds-WP_003898875.1;Parent=gene-AL60_RS23295;Dbxref=GenBank:WP_003898875.1;Name=WP_003898875.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215941.1;locus_tag=AL60_RS23295;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003898875.1;transl_table=11 NZ_KK316858.1 RefSeq gene 117630 118892 . - . ID=gene-AL60_RS23300;Name=lipO;gbkey=Gene;gene=lipO;gene_biotype=protein_coding;locus_tag=AL60_RS23300;old_locus_tag=AL60_03631 NZ_KK316858.1 Protein Homology CDS 117630 118892 . - 0 ID=cds-WP_003407371.1;Parent=gene-AL60_RS23300;Dbxref=GenBank:WP_003407371.1;Name=WP_003407371.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipO;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215942.1;locus_tag=AL60_RS23300;product=alpha/beta hydrolase;protein_id=WP_003407371.1;transl_table=11 NZ_KK316858.1 RefSeq gene 118892 120499 . - . ID=gene-AL60_RS23305;Name=fadD12;gbkey=Gene;gene=fadD12;gene_biotype=protein_coding;locus_tag=AL60_RS23305;old_locus_tag=AL60_03632 NZ_KK316858.1 Protein Homology CDS 118892 120499 . - 0 ID=cds-WP_003898876.1;Parent=gene-AL60_RS23305;Dbxref=GenBank:WP_003898876.1;Name=WP_003898876.1;gbkey=CDS;gene=fadD12;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215943.1;locus_tag=AL60_RS23305;product=acyl-CoA ligase FadD12;protein_id=WP_003898876.1;transl_table=11 NZ_KK316858.1 RefSeq gene 120503 121330 . - . ID=gene-AL60_RS23310;Name=AL60_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23310;old_locus_tag=AL60_03633 NZ_KK316858.1 Protein Homology CDS 120503 121330 . - 0 ID=cds-WP_003407374.1;Parent=gene-AL60_RS23310;Dbxref=GenBank:WP_003407374.1;Name=WP_003407374.1;Ontology_term=GO:0006644,GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid metabolic process|0006644||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215944.1;locus_tag=AL60_RS23310;product=lysophospholipid acyltransferase family protein;protein_id=WP_003407374.1;transl_table=11 NZ_KK316858.1 RefSeq gene 121449 122717 . + . ID=gene-AL60_RS23315;Name=AL60_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23315;old_locus_tag=AL60_03634 NZ_KK316858.1 Protein Homology CDS 121449 122717 . + 0 ID=cds-WP_003407376.1;Parent=gene-AL60_RS23315;Dbxref=GenBank:WP_003407376.1;Name=WP_003407376.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215945.1;locus_tag=AL60_RS23315;product=PucR family transcriptional regulator;protein_id=WP_003407376.1;transl_table=11 NZ_KK316858.1 RefSeq gene 122957 124543 . + . ID=gene-AL60_RS23320;Name=AL60_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23320;old_locus_tag=AL60_03635 NZ_KK316858.1 Protein Homology CDS 122957 124543 . + 0 ID=cds-WP_031721516.1;Parent=gene-AL60_RS23320;Dbxref=GenBank:WP_031721516.1;Name=WP_031721516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177810.1;locus_tag=AL60_RS23320;product=esterase PE16;protein_id=WP_031721516.1;transl_table=11 NZ_KK316858.1 RefSeq gene 124654 126423 . + . ID=gene-AL60_RS23325;Name=AL60_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23325;old_locus_tag=AL60_03636 NZ_KK316858.1 Protein Homology CDS 124654 126423 . + 0 ID=cds-WP_003898877.1;Parent=gene-AL60_RS23325;Dbxref=GenBank:WP_003898877.1;Name=WP_003898877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215947.1;locus_tag=AL60_RS23325;product=DUF3556 domain-containing protein;protein_id=WP_003898877.1;transl_table=11 NZ_KK316858.1 RefSeq gene 126420 127841 . + . ID=gene-AL60_RS23330;Name=AL60_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23330;old_locus_tag=AL60_03637 NZ_KK316858.1 Protein Homology CDS 126420 127841 . + 0 ID=cds-WP_003407382.1;Parent=gene-AL60_RS23330;Dbxref=GenBank:WP_003407382.1;Name=WP_003407382.1;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215948.1;locus_tag=AL60_RS23330;product=phytoene desaturase family protein;protein_id=WP_003407382.1;transl_table=11 NZ_KK316858.1 RefSeq gene 128005 128820 . + . ID=gene-AL60_RS23335;Name=ldtMt3;gbkey=Gene;gene=ldtMt3;gene_biotype=protein_coding;locus_tag=AL60_RS23335;old_locus_tag=AL60_03638 NZ_KK316858.1 Protein Homology CDS 128005 128820 . + 0 ID=cds-WP_003407384.1;Parent=gene-AL60_RS23335;Dbxref=GenBank:WP_003407384.1;Name=WP_003407384.1;gbkey=CDS;gene=ldtMt3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215949.1;locus_tag=AL60_RS23335;product=L%2CD-transpeptidase LdtMt3;protein_id=WP_003407384.1;transl_table=11 NZ_KK316858.1 RefSeq gene 128827 128964 . + . ID=gene-AL60_RS23340;Name=AL60_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23340;old_locus_tag=AL60_03639 NZ_KK316858.1 Protein Homology CDS 128827 128964 . + 0 ID=cds-WP_003908693.1;Parent=gene-AL60_RS23340;Dbxref=GenBank:WP_003908693.1;Name=WP_003908693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215950.1;locus_tag=AL60_RS23340;product=hypothetical protein;protein_id=WP_003908693.1;transl_table=11 NZ_KK316858.1 RefSeq gene 128913 129542 . - . ID=gene-AL60_RS23345;Name=AL60_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23345;old_locus_tag=AL60_03640 NZ_KK316858.1 Protein Homology CDS 128913 129542 . - 0 ID=cds-WP_003898878.1;Parent=gene-AL60_RS23345;Dbxref=GenBank:WP_003898878.1;Name=WP_003898878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215951.1;locus_tag=AL60_RS23345;product=hypothetical protein;protein_id=WP_003898878.1;transl_table=11 NZ_KK316858.1 RefSeq gene 129899 130918 . + . ID=gene-AL60_RS23350;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=AL60_RS23350;old_locus_tag=AL60_03641 NZ_KK316858.1 Protein Homology CDS 129899 130918 . + 0 ID=cds-WP_003407390.1;Parent=gene-AL60_RS23350;Dbxref=GenBank:WP_003407390.1;Name=WP_003407390.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215952.1;locus_tag=AL60_RS23350;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_003407390.1;transl_table=11 NZ_KK316858.1 RefSeq gene 130921 132159 . + . ID=gene-AL60_RS23355;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=AL60_RS23355;old_locus_tag=AL60_03642 NZ_KK316858.1 Protein Homology CDS 130921 132159 . + 0 ID=cds-WP_003900339.1;Parent=gene-AL60_RS23355;Dbxref=GenBank:WP_003900339.1;Name=WP_003900339.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;gene=pgk;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215953.1;locus_tag=AL60_RS23355;product=phosphoglycerate kinase;protein_id=WP_003900339.1;transl_table=11 NZ_KK316858.1 RefSeq gene 132156 132941 . + . ID=gene-AL60_RS23360;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AL60_RS23360;old_locus_tag=AL60_03643 NZ_KK316858.1 Protein Homology CDS 132156 132941 . + 0 ID=cds-WP_003407398.1;Parent=gene-AL60_RS23360;Dbxref=GenBank:WP_003407398.1;Name=WP_003407398.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215954.1;locus_tag=AL60_RS23360;product=triose-phosphate isomerase;protein_id=WP_003407398.1;transl_table=11 NZ_KK316858.1 RefSeq gene 132957 133184 . - . ID=gene-AL60_RS0105395;Name=AL60_RS0105395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105395 NZ_KK316858.1 Protein Homology CDS 132957 133184 . - 0 ID=cds-WP_003407402.1;Parent=gene-AL60_RS0105395;Dbxref=GenBank:WP_003407402.1;Name=WP_003407402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003407402.1;locus_tag=AL60_RS0105395;product=hypothetical protein;protein_id=WP_003407402.1;transl_table=11 NZ_KK316858.1 RefSeq gene 133160 133291 . - . ID=gene-AL60_RS28020;Name=AL60_RS28020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28020 NZ_KK316858.1 Protein Homology CDS 133160 133291 . - 0 ID=cds-WP_349875721.1;Parent=gene-AL60_RS28020;Dbxref=GenBank:WP_349875721.1;Name=WP_349875721.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044451.3;locus_tag=AL60_RS28020;product=hypothetical protein;protein_id=WP_349875721.1;transl_table=11 NZ_KK316858.1 RefSeq pseudogene 133375 133545 . - . ID=gene-AL60_RS28025;Name=AL60_RS28025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28025;partial=true;pseudo=true;start_range=.,133375 NZ_KK316858.1 Protein Homology CDS 133375 133545 . - 0 ID=cds-AL60_RS28025;Parent=gene-AL60_RS28025;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF012655.6;locus_tag=AL60_RS28025;partial=true;product=TetR family transcriptional regulator;pseudo=true;start_range=.,133375;transl_table=11 NZ_KK316858.1 RefSeq gene 133553 133978 . - . ID=gene-AL60_RS23365;Name=AL60_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23365;old_locus_tag=AL60_03644 NZ_KK316858.1 Protein Homology CDS 133553 133978 . - 0 ID=cds-WP_003407404.1;Parent=gene-AL60_RS23365;Dbxref=GenBank:WP_003407404.1;Name=WP_003407404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215955.1;locus_tag=AL60_RS23365;product=nuclear transport factor 2 family protein;protein_id=WP_003407404.1;transl_table=11 NZ_KK316858.1 RefSeq gene 134429 134662 . + . ID=gene-AL60_RS23370;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AL60_RS23370;old_locus_tag=AL60_03645 NZ_KK316858.1 Protein Homology CDS 134429 134662 . + 0 ID=cds-WP_003407407.1;Parent=gene-AL60_RS23370;Dbxref=GenBank:WP_003407407.1;Name=WP_003407407.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215956.2;locus_tag=AL60_RS23370;product=preprotein translocase subunit SecG;protein_id=WP_003407407.1;transl_table=11 NZ_KK316858.1 RefSeq gene 134801 135309 . - . ID=gene-AL60_RS0105405;Name=AL60_RS0105405;end_range=135309,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105405;partial=true NZ_KK316858.1 Protein Homology CDS 134801 135309 . - 2 ID=cds-WP_031721517.1;Parent=gene-AL60_RS0105405;Dbxref=GenBank:WP_031721517.1;Name=WP_031721517.1;end_range=135309,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177811.1;locus_tag=AL60_RS0105405;partial=true;product=hypothetical protein;protein_id=WP_031721517.1;transl_table=11 ##sequence-region NZ_KK316859.1 1 101284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316859.1 RefSeq region 1 101284 . + . ID=NZ_KK316859.1:1..101284;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316859.1 RefSeq gene 1 3687 . - . ID=gene-AL60_RS23375;Name=AL60_RS23375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23375;old_locus_tag=AL60_03646;partial=true;start_range=.,1 NZ_KK316859.1 Protein Homology CDS 1 3687 . - 0 ID=cds-WP_044490999.1;Parent=gene-AL60_RS23375;Dbxref=GenBank:WP_044490999.1;Name=WP_044490999.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177962.1;locus_tag=AL60_RS23375;partial=true;product=PE family protein;protein_id=WP_044490999.1;start_range=.,1;transl_table=11 NZ_KK316859.1 RefSeq gene 4111 4368 . - . ID=gene-AL60_RS23380;Name=AL60_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23380;old_locus_tag=AL60_03647 NZ_KK316859.1 Protein Homology CDS 4111 4368 . - 0 ID=cds-WP_003417619.1;Parent=gene-AL60_RS23380;Dbxref=GenBank:WP_003417619.1;Name=WP_003417619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217863.1;locus_tag=AL60_RS23380;product=DUF3017 domain-containing protein;protein_id=WP_003417619.1;transl_table=11 NZ_KK316859.1 RefSeq gene 4624 14097 . - . ID=gene-AL60_RS23385;Name=AL60_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23385;old_locus_tag=AL60_03648 NZ_KK316859.1 Protein Homology CDS 4624 14097 . - 0 ID=cds-WP_009938649.1;Parent=gene-AL60_RS23385;Dbxref=GenBank:WP_009938649.1;Name=WP_009938649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177963.1;locus_tag=AL60_RS23385;product=PPE family protein;protein_id=WP_009938649.1;transl_table=11 NZ_KK316859.1 RefSeq gene 14678 15169 . + . ID=gene-AL60_RS23390;Name=AL60_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23390;old_locus_tag=AL60_03649 NZ_KK316859.1 Protein Homology CDS 14678 15169 . + 0 ID=cds-WP_003422266.1-2;Parent=gene-AL60_RS23390;Dbxref=GenBank:WP_003422266.1;Name=WP_003422266.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013698.7;locus_tag=AL60_RS23390;product=IS110 family transposase;protein_id=WP_003422266.1;transl_table=11 NZ_KK316859.1 RefSeq pseudogene 15184 15273 . + . ID=gene-AL60_RS27690;Name=AL60_RS27690;end_range=15273,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27690;partial=true;pseudo=true NZ_KK316859.1 Protein Homology CDS 15184 15273 . + 0 ID=cds-AL60_RS27690;Parent=gene-AL60_RS27690;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=15273,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218362.1;locus_tag=AL60_RS27690;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_KK316859.1 RefSeq pseudogene 15671 16024 . - . ID=gene-AL60_RS27695;Name=AL60_RS27695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27695;partial=true;pseudo=true;start_range=.,15671 NZ_KK316859.1 Protein Homology CDS 15671 16024 . - 0 ID=cds-AL60_RS27695;Parent=gene-AL60_RS27695;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013753.6;locus_tag=AL60_RS27695;partial=true;product=transposase;pseudo=true;start_range=.,15671;transl_table=11 NZ_KK316859.1 RefSeq gene 16241 16528 . - . ID=gene-AL60_RS0105410;Name=AL60_RS0105410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105410 NZ_KK316859.1 Protein Homology CDS 16241 16528 . - 0 ID=cds-WP_009938650.1;Parent=gene-AL60_RS0105410;Dbxref=GenBank:WP_009938650.1;Name=WP_009938650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938650.1;locus_tag=AL60_RS0105410;product=hypothetical protein;protein_id=WP_009938650.1;transl_table=11 NZ_KK316859.1 RefSeq gene 16865 28015 . - . ID=gene-AL60_RS23400;Name=AL60_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23400;old_locus_tag=AL60_03651 NZ_KK316859.1 Protein Homology CDS 16865 28015 . - 0 ID=cds-WP_009939158.1;Parent=gene-AL60_RS23400;Dbxref=GenBank:WP_009939158.1;Name=WP_009939158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177964.1;locus_tag=AL60_RS23400;product=PPE family protein;protein_id=WP_009939158.1;transl_table=11 NZ_KK316859.1 RefSeq gene 28259 28948 . - . ID=gene-AL60_RS27700;Name=AL60_RS27700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27700;old_locus_tag=AL60_03652 NZ_KK316859.1 Protein Homology CDS 28259 28948 . - 0 ID=cds-WP_003917774.1;Parent=gene-AL60_RS27700;Dbxref=GenBank:WP_003917774.1;Name=WP_003917774.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF019643.6;locus_tag=AL60_RS27700;product=BBE domain-containing protein;protein_id=WP_003917774.1;transl_table=11 NZ_KK316859.1 RefSeq pseudogene 29135 29622 . - . ID=gene-AL60_RS27705;Name=AL60_RS27705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27705;old_locus_tag=AL60_03653;pseudo=true NZ_KK316859.1 Protein Homology CDS 29135 29622 . - 0 ID=cds-AL60_RS27705;Parent=gene-AL60_RS27705;Note=frameshifted;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF013714.6;locus_tag=AL60_RS27705;product=FAD-binding protein;pseudo=true;transl_table=11 NZ_KK316859.1 RefSeq gene 29649 29909 . - . ID=gene-AL60_RS27715;Name=AL60_RS27715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27715;old_locus_tag=AL60_03654 NZ_KK316859.1 Protein Homology CDS 29649 29909 . - 0 ID=cds-WP_003417741.1;Parent=gene-AL60_RS27715;Dbxref=GenBank:WP_003417741.1;Name=WP_003417741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217870.2;locus_tag=AL60_RS27715;product=hypothetical protein;protein_id=WP_003417741.1;transl_table=11 NZ_KK316859.1 RefSeq gene 30024 30413 . + . ID=gene-AL60_RS23420;Name=AL60_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23420;old_locus_tag=AL60_03655 NZ_KK316859.1 Protein Homology CDS 30024 30413 . + 0 ID=cds-WP_003417745.1;Parent=gene-AL60_RS23420;Dbxref=GenBank:WP_003417745.1;Name=WP_003417745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217871.1;locus_tag=AL60_RS23420;product=DUF732 domain-containing protein;protein_id=WP_003417745.1;transl_table=11 NZ_KK316859.1 RefSeq gene 30427 30720 . - . ID=gene-AL60_RS23425;Name=AL60_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23425;old_locus_tag=AL60_03656 NZ_KK316859.1 Protein Homology CDS 30427 30720 . - 0 ID=cds-WP_003417749.1;Parent=gene-AL60_RS23425;Dbxref=GenBank:WP_003417749.1;Name=WP_003417749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217872.1;locus_tag=AL60_RS23425;product=DUF3017 domain-containing protein;protein_id=WP_003417749.1;transl_table=11 NZ_KK316859.1 RefSeq gene 30717 31562 . - . ID=gene-AL60_RS23430;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=AL60_RS23430;old_locus_tag=AL60_03657 NZ_KK316859.1 Protein Homology CDS 30717 31562 . - 0 ID=cds-WP_003417751.1;Parent=gene-AL60_RS23430;Dbxref=GenBank:WP_003417751.1;Name=WP_003417751.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015354771.1;locus_tag=AL60_RS23430;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=WP_003417751.1;transl_table=11 NZ_KK316859.1 RefSeq gene 31686 31961 . + . ID=gene-AL60_RS23435;Name=relJ;gbkey=Gene;gene=relJ;gene_biotype=protein_coding;locus_tag=AL60_RS23435;old_locus_tag=AL60_03658 NZ_KK316859.1 Protein Homology CDS 31686 31961 . + 0 ID=cds-WP_003417757.1;Parent=gene-AL60_RS23435;Dbxref=GenBank:WP_003417757.1;Name=WP_003417757.1;gbkey=CDS;gene=relJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217874.1;locus_tag=AL60_RS23435;product=type II toxin-antitoxin system antitoxin RelJ;protein_id=WP_003417757.1;transl_table=11 NZ_KK316859.1 RefSeq gene 31958 32215 . + . ID=gene-AL60_RS23440;Name=relK;gbkey=Gene;gene=relK;gene_biotype=protein_coding;locus_tag=AL60_RS23440;old_locus_tag=AL60_03659 NZ_KK316859.1 Protein Homology CDS 31958 32215 . + 0 ID=cds-WP_003417760.1;Parent=gene-AL60_RS23440;Dbxref=GenBank:WP_003417760.1;Name=WP_003417760.1;Ontology_term=GO:0008219;gbkey=CDS;gene=relK;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217875.1;locus_tag=AL60_RS23440;product=Txe/YoeB family addiction module toxin;protein_id=WP_003417760.1;transl_table=11 NZ_KK316859.1 RefSeq gene 32257 33447 . + . ID=gene-AL60_RS23445;Name=AL60_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23445;old_locus_tag=AL60_03660 NZ_KK316859.1 Protein Homology CDS 32257 33447 . + 0 ID=cds-WP_012054356.1;Parent=gene-AL60_RS23445;Dbxref=GenBank:WP_012054356.1;Name=WP_012054356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217876.1;locus_tag=AL60_RS23445;product=NADH:flavin oxidoreductase;protein_id=WP_012054356.1;transl_table=11 NZ_KK316859.1 RefSeq gene 33564 33932 . + . ID=gene-AL60_RS23450;Name=AL60_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23450;old_locus_tag=AL60_03661 NZ_KK316859.1 Protein Homology CDS 33564 33932 . + 0 ID=cds-WP_003417765.1;Parent=gene-AL60_RS23450;Dbxref=GenBank:WP_003417765.1;Name=WP_003417765.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217877.1;locus_tag=AL60_RS23450;product=FHA domain-containing protein;protein_id=WP_003417765.1;transl_table=11 NZ_KK316859.1 RefSeq gene 33929 34480 . - . ID=gene-AL60_RS23455;Name=mfpA;gbkey=Gene;gene=mfpA;gene_biotype=protein_coding;locus_tag=AL60_RS23455;old_locus_tag=AL60_03662 NZ_KK316859.1 Protein Homology CDS 33929 34480 . - 0 ID=cds-WP_003417767.1;Parent=gene-AL60_RS23455;Dbxref=GenBank:WP_003417767.1;Name=WP_003417767.1;gbkey=CDS;gene=mfpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217878.1;locus_tag=AL60_RS23455;product=pentapeptide repeat protein MfpA;protein_id=WP_003417767.1;transl_table=11 NZ_KK316859.1 RefSeq gene 34487 35068 . - . ID=gene-AL60_RS23460;Name=AL60_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23460;old_locus_tag=AL60_03663 NZ_KK316859.1 Protein Homology CDS 34487 35068 . - 0 ID=cds-WP_003417769.1;Parent=gene-AL60_RS23460;Dbxref=GenBank:WP_003417769.1;Name=WP_003417769.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217879.1;locus_tag=AL60_RS23460;product=GTP-binding protein;protein_id=WP_003417769.1;transl_table=11 NZ_KK316859.1 RefSeq gene 35049 35417 . - . ID=gene-AL60_RS23465;Name=AL60_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23465;old_locus_tag=AL60_03664 NZ_KK316859.1 Protein Homology CDS 35049 35417 . - 0 ID=cds-WP_003417772.1;Parent=gene-AL60_RS23465;Dbxref=GenBank:WP_003417772.1;Name=WP_003417772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217880.1;locus_tag=AL60_RS23465;product=DUF742 domain-containing protein;protein_id=WP_003417772.1;transl_table=11 NZ_KK316859.1 RefSeq gene 35395 35787 . - . ID=gene-AL60_RS23470;Name=AL60_RS23470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23470;old_locus_tag=AL60_03665 NZ_KK316859.1 Protein Homology CDS 35395 35787 . - 0 ID=cds-WP_003417776.1;Parent=gene-AL60_RS23470;Dbxref=GenBank:WP_003417776.1;Name=WP_003417776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217881.1;locus_tag=AL60_RS23470;product=serine protease inhibitor;protein_id=WP_003417776.1;transl_table=11 NZ_KK316859.1 RefSeq gene 35784 38414 . - . ID=gene-AL60_RS23475;Name=AL60_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23475;old_locus_tag=AL60_03666 NZ_KK316859.1 Protein Homology CDS 35784 38414 . - 0 ID=cds-WP_003907034.1;Parent=gene-AL60_RS23475;Dbxref=GenBank:WP_003907034.1;Name=WP_003907034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217882.1;locus_tag=AL60_RS23475;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_003907034.1;transl_table=11 NZ_KK316859.1 RefSeq gene 38650 39114 . + . ID=gene-AL60_RS23480;Name=spoU;gbkey=Gene;gene=spoU;gene_biotype=protein_coding;locus_tag=AL60_RS23480;old_locus_tag=AL60_03667 NZ_KK316859.1 Protein Homology CDS 38650 39114 . + 0 ID=cds-WP_003417878.1;Parent=gene-AL60_RS23480;Dbxref=GenBank:WP_003417878.1;Name=WP_003417878.1;Ontology_term=GO:0001510,GO:0003723,GO:0008173,GO:0141098,GO:1904047;gbkey=CDS;gene=spoU;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,tRNA (cytidine(34)-2'-O)-methyltransferase activity|0141098||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217883.1;locus_tag=AL60_RS23480;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_003417878.1;transl_table=11 NZ_KK316859.1 RefSeq gene 39481 41256 . + . ID=gene-AL60_RS23485;Name=AL60_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23485;old_locus_tag=AL60_03668 NZ_KK316859.1 Protein Homology CDS 39481 41256 . + 0 ID=cds-WP_009938654.1;Parent=gene-AL60_RS23485;Dbxref=GenBank:WP_009938654.1;Name=WP_009938654.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177965.1;locus_tag=AL60_RS23485;product=PE family protein;protein_id=WP_009938654.1;transl_table=11 NZ_KK316859.1 RefSeq gene 41257 41901 . - . ID=gene-AL60_RS23490;Name=AL60_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23490;old_locus_tag=AL60_03669 NZ_KK316859.1 Protein Homology CDS 41257 41901 . - 0 ID=cds-WP_003417881.1;Parent=gene-AL60_RS23490;Dbxref=GenBank:WP_003417881.1;Name=WP_003417881.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217885.1;locus_tag=AL60_RS23490;product=nitroreductase family protein;protein_id=WP_003417881.1;transl_table=11 NZ_KK316859.1 RefSeq gene 41924 42334 . + . ID=gene-AL60_RS23495;Name=AL60_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23495;old_locus_tag=AL60_03670 NZ_KK316859.1 Protein Homology CDS 41924 42334 . + 0 ID=cds-WP_003912209.1;Parent=gene-AL60_RS23495;Dbxref=GenBank:WP_003912209.1;Name=WP_003912209.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912209.1;locus_tag=AL60_RS23495;product=TIGR03667 family PPOX class F420-dependent oxidoreductase;protein_id=WP_003912209.1;transl_table=11 NZ_KK316859.1 RefSeq gene 42423 45698 . - . ID=gene-AL60_RS23500;Name=dnaE2;gbkey=Gene;gene=dnaE2;gene_biotype=protein_coding;locus_tag=AL60_RS23500;old_locus_tag=AL60_03671 NZ_KK316859.1 Protein Homology CDS 42423 45698 . - 0 ID=cds-WP_003417885.1;Parent=gene-AL60_RS23500;Dbxref=GenBank:WP_003417885.1;Name=WP_003417885.1;gbkey=CDS;gene=dnaE2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003417885.1;locus_tag=AL60_RS23500;product=error-prone DNA polymerase DnaE2;protein_id=WP_003417885.1;transl_table=11 NZ_KK316859.1 RefSeq gene 45854 47194 . + . ID=gene-AL60_RS23505;Name=AL60_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23505;old_locus_tag=AL60_03672 NZ_KK316859.1 Protein Homology CDS 45854 47194 . + 0 ID=cds-WP_003900036.1;Parent=gene-AL60_RS23505;Dbxref=GenBank:WP_003900036.1;Name=WP_003900036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217888.1;locus_tag=AL60_RS23505;product=diacylglycerol O-acyltransferase;protein_id=WP_003900036.1;transl_table=11 NZ_KK316859.1 RefSeq gene 47236 48411 . + . ID=gene-AL60_RS23510;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AL60_RS23510;old_locus_tag=AL60_03673 NZ_KK316859.1 Protein Homology CDS 47236 48411 . + 0 ID=cds-WP_003417892.1;Parent=gene-AL60_RS23510;Dbxref=GenBank:WP_003417892.1;Name=WP_003417892.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217889.1;locus_tag=AL60_RS23510;product=trehalose-phosphatase;protein_id=WP_003417892.1;transl_table=11 NZ_KK316859.1 RefSeq pseudogene 48465 48554 . + . ID=gene-AL60_RS26505;Name=AL60_RS26505;end_range=48554,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26505;old_locus_tag=AL60_03674;partial=true;pseudo=true NZ_KK316859.1 Protein Homology CDS 48465 48554 . + 0 ID=cds-AL60_RS26505;Parent=gene-AL60_RS26505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=48554,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177968.1;locus_tag=AL60_RS26505;partial=true;product=PE domain-containing protein;pseudo=true;transl_table=11 NZ_KK316859.1 RefSeq gene 48663 49289 . + . ID=gene-AL60_RS23515;Name=AL60_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23515;old_locus_tag=AL60_03675 NZ_KK316859.1 Protein Homology CDS 48663 49289 . + 0 ID=cds-WP_009938655.1;Parent=gene-AL60_RS23515;Dbxref=GenBank:WP_009938655.1;Name=WP_009938655.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF012596.6;locus_tag=AL60_RS23515;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_009938655.1;transl_table=11 NZ_KK316859.1 RefSeq gene 49290 49538 . + . ID=gene-AL60_RS27720;Name=AL60_RS27720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27720;old_locus_tag=AL60_03676 NZ_KK316859.1 Protein Homology CDS 49290 49538 . + 0 ID=cds-WP_003417897.1;Parent=gene-AL60_RS27720;Dbxref=GenBank:WP_003417897.1;Name=WP_003417897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001712.1;locus_tag=AL60_RS27720;product=Clp protease/crotonase-like domain-containing protein;protein_id=WP_003417897.1;transl_table=11 NZ_KK316859.1 RefSeq gene 49543 50970 . + . ID=gene-AL60_RS23525;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;locus_tag=AL60_RS23525;old_locus_tag=AL60_03677 NZ_KK316859.1 Protein Homology CDS 49543 50970 . + 0 ID=cds-WP_012054357.1;Parent=gene-AL60_RS23525;Dbxref=GenBank:WP_012054357.1;Name=WP_012054357.1;Ontology_term=GO:0003824;gbkey=CDS;gene=amiD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217892.1;locus_tag=AL60_RS23525;product=amidase;protein_id=WP_012054357.1;transl_table=11 NZ_KK316859.1 RefSeq gene 51078 51731 . + . ID=gene-AL60_RS23530;Name=AL60_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23530;old_locus_tag=AL60_03678 NZ_KK316859.1 Protein Homology CDS 51078 51731 . + 0 ID=cds-WP_003417903.1;Parent=gene-AL60_RS23530;Dbxref=GenBank:WP_003417903.1;Name=WP_003417903.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217893.1;locus_tag=AL60_RS23530;product=HAD family hydrolase;protein_id=WP_003417903.1;transl_table=11 NZ_KK316859.1 RefSeq gene 51770 53275 . - . ID=gene-AL60_RS23535;Name=AL60_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23535;old_locus_tag=AL60_03679 NZ_KK316859.1 Protein Homology CDS 51770 53275 . - 0 ID=cds-WP_003417905.1;Parent=gene-AL60_RS23535;Dbxref=GenBank:WP_003417905.1;Name=WP_003417905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217894.1;locus_tag=AL60_RS23535;product=type B diterpene cyclase;protein_id=WP_003417905.1;transl_table=11 NZ_KK316859.1 RefSeq gene 53280 54170 . - . ID=gene-AL60_RS23540;Name=AL60_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23540;old_locus_tag=AL60_03680 NZ_KK316859.1 Protein Homology CDS 53280 54170 . - 0 ID=cds-WP_003417908.1;Parent=gene-AL60_RS23540;Dbxref=GenBank:WP_003417908.1;Name=WP_003417908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217895.1;locus_tag=AL60_RS23540;product=diterpene synthase;protein_id=WP_003417908.1;transl_table=11 NZ_KK316859.1 RefSeq pseudogene 54179 55982 . - . ID=gene-AL60_RS23545;Name=AL60_RS23545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS23545;old_locus_tag=AL60_03681;pseudo=true NZ_KK316859.1 Protein Homology CDS 54179 55982 . - 0 ID=cds-AL60_RS23545;Parent=gene-AL60_RS23545;Note=frameshifted;Ontology_term=GO:0016114,GO:0008661;gbkey=CDS;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950880.1;locus_tag=AL60_RS23545;product=1-deoxy-D-xylulose-5-phosphate synthase;pseudo=true;transl_table=11 NZ_KK316859.1 RefSeq gene 56012 57001 . - . ID=gene-AL60_RS23550;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=AL60_RS23550;old_locus_tag=AL60_03682 NZ_KK316859.1 Protein Homology CDS 56012 57001 . - 0 ID=cds-WP_003417912.1;Parent=gene-AL60_RS23550;Dbxref=GenBank:WP_003417912.1;Name=WP_003417912.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177967.1;locus_tag=AL60_RS23550;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_003417912.1;transl_table=11 NZ_KK316859.1 RefSeq gene 57001 58053 . - . ID=gene-AL60_RS23555;Name=idsB;gbkey=Gene;gene=idsB;gene_biotype=protein_coding;locus_tag=AL60_RS23555;old_locus_tag=AL60_03683 NZ_KK316859.1 Protein Homology CDS 57001 58053 . - 0 ID=cds-WP_003900678.1;Parent=gene-AL60_RS23555;Dbxref=GenBank:WP_003900678.1;Name=WP_003900678.1;Ontology_term=GO:0008299,GO:0033386,GO:0004311,GO:0004659;gbkey=CDS;gene=idsB;go_function=geranylgeranyl diphosphate synthase activity|0004311||IEA,prenyltransferase activity|0004659||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,geranylgeranyl diphosphate biosynthetic process|0033386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217900.1;locus_tag=AL60_RS23555;product=geranylgeranyl diphosphate synthase IdsB;protein_id=WP_003900678.1;transl_table=11 NZ_KK316859.1 RefSeq gene 58807 59199 . - . ID=gene-AL60_RS23560;Name=AL60_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23560;old_locus_tag=AL60_03684 NZ_KK316859.1 Protein Homology CDS 58807 59199 . - 0 ID=cds-WP_003417916.1;Parent=gene-AL60_RS23560;Dbxref=GenBank:WP_003417916.1;Name=WP_003417916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217901.1;locus_tag=AL60_RS23560;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003417916.1;transl_table=11 NZ_KK316859.1 RefSeq gene 59199 59474 . - . ID=gene-AL60_RS23565;Name=AL60_RS23565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23565;old_locus_tag=AL60_03685 NZ_KK316859.1 Protein Homology CDS 59199 59474 . - 0 ID=cds-WP_003912214.1;Parent=gene-AL60_RS23565;Dbxref=GenBank:WP_003912214.1;Name=WP_003912214.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912214.1;locus_tag=AL60_RS23565;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003912214.1;transl_table=11 NZ_KK316859.1 RefSeq pseudogene 59656 61027 . + . ID=gene-AL60_RS26510;Name=AL60_RS26510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26510;pseudo=true NZ_KK316859.1 Protein Homology CDS 59656 61027 . + 0 ID=cds-AL60_RS26510;Parent=gene-AL60_RS26510;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612244.1;locus_tag=AL60_RS26510;product=ISNCY family transposase;pseudo=true;transl_table=11 NZ_KK316859.1 RefSeq gene 61217 63412 . + . ID=gene-AL60_RS23580;Name=AL60_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23580;old_locus_tag=AL60_03688 NZ_KK316859.1 Protein Homology CDS 61217 63412 . + 0 ID=cds-WP_012054358.1;Parent=gene-AL60_RS23580;Dbxref=GenBank:WP_012054358.1;Name=WP_012054358.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177968.1;locus_tag=AL60_RS23580;product=PE family protein;protein_id=WP_012054358.1;transl_table=11 NZ_KK316859.1 RefSeq gene 63483 64355 . - . ID=gene-AL60_RS23585;Name=htdY;gbkey=Gene;gene=htdY;gene_biotype=protein_coding;locus_tag=AL60_RS23585;old_locus_tag=AL60_03689 NZ_KK316859.1 Protein Homology CDS 63483 64355 . - 0 ID=cds-WP_003417929.1;Parent=gene-AL60_RS23585;Dbxref=GenBank:WP_003417929.1;Name=WP_003417929.1;gbkey=CDS;gene=htdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217906.1;locus_tag=AL60_RS23585;product=3-hydroxyacyl-thioester dehydratase HtdY;protein_id=WP_003417929.1;transl_table=11 NZ_KK316859.1 RefSeq gene 64429 65139 . + . ID=gene-AL60_RS23590;Name=lpqD;gbkey=Gene;gene=lpqD;gene_biotype=protein_coding;locus_tag=AL60_RS23590;old_locus_tag=AL60_03690 NZ_KK316859.1 Protein Homology CDS 64429 65139 . + 0 ID=cds-WP_003417932.1;Parent=gene-AL60_RS23590;Dbxref=GenBank:WP_003417932.1;Name=WP_003417932.1;Ontology_term=GO:0016791;gbkey=CDS;gene=lpqD;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217907.1;locus_tag=AL60_RS23590;product=histidine phosphatase family protein;protein_id=WP_003417932.1;transl_table=11 NZ_KK316859.1 RefSeq gene 65185 67137 . + . ID=gene-AL60_RS23595;Name=AL60_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23595;old_locus_tag=AL60_03691 NZ_KK316859.1 Protein Homology CDS 65185 67137 . + 0 ID=cds-WP_003417940.1;Parent=gene-AL60_RS23595;Dbxref=GenBank:WP_003417940.1;Name=WP_003417940.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217908.1;locus_tag=AL60_RS23595;product=SDR family oxidoreductase;protein_id=WP_003417940.1;transl_table=11 NZ_KK316859.1 RefSeq gene 67138 68001 . - . ID=gene-AL60_RS23600;Name=cmaA1;gbkey=Gene;gene=cmaA1;gene_biotype=protein_coding;locus_tag=AL60_RS23600;old_locus_tag=AL60_03692 NZ_KK316859.1 Protein Homology CDS 67138 68001 . - 0 ID=cds-WP_003900041.1;Parent=gene-AL60_RS23600;Dbxref=GenBank:WP_003900041.1;Name=WP_003900041.1;gbkey=CDS;gene=cmaA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217909.1;locus_tag=AL60_RS23600;product=cyclopropane mycolic acid synthase CmaA1;protein_id=WP_003900041.1;transl_table=11 NZ_KK316859.1 RefSeq gene 68025 68951 . + . ID=gene-AL60_RS23605;Name=iunH;gbkey=Gene;gene=iunH;gene_biotype=protein_coding;locus_tag=AL60_RS23605;old_locus_tag=AL60_03693 NZ_KK316859.1 Protein Homology CDS 68025 68951 . + 0 ID=cds-WP_003417946.1;Parent=gene-AL60_RS23605;Dbxref=GenBank:WP_003417946.1;Name=WP_003417946.1;gbkey=CDS;gene=iunH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217910.1;locus_tag=AL60_RS23605;product=nucleoside hydrolase IunH;protein_id=WP_003417946.1;transl_table=11 NZ_KK316859.1 RefSeq gene 69006 70589 . - . ID=gene-AL60_RS23610;Name=AL60_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23610;old_locus_tag=AL60_03694 NZ_KK316859.1 Protein Homology CDS 69006 70589 . - 0 ID=cds-WP_003900042.1;Parent=gene-AL60_RS23610;Dbxref=GenBank:WP_003900042.1;Name=WP_003900042.1;Ontology_term=GO:0006261,GO:0000287,GO:0003684,GO:0003887;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217911.1;locus_tag=AL60_RS23610;product=DNA polymerase Y family protein;protein_id=WP_003900042.1;transl_table=11 NZ_KK316859.1 RefSeq gene 70586 71200 . - . ID=gene-AL60_RS23615;Name=AL60_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23615;old_locus_tag=AL60_03695 NZ_KK316859.1 Protein Homology CDS 70586 71200 . - 0 ID=cds-WP_003900043.1;Parent=gene-AL60_RS23615;Dbxref=GenBank:WP_003900043.1;Name=WP_003900043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217912.2;locus_tag=AL60_RS23615;product=hypothetical protein;protein_id=WP_003900043.1;transl_table=11 NZ_KK316859.1 RefSeq gene 71199 71909 . + . ID=gene-AL60_RS23620;Name=AL60_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23620;old_locus_tag=AL60_03696 NZ_KK316859.1 Protein Homology CDS 71199 71909 . + 0 ID=cds-WP_003900680.1;Parent=gene-AL60_RS23620;Dbxref=GenBank:WP_003900680.1;Name=WP_003900680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487565.1;locus_tag=AL60_RS23620;product=hypothetical protein;protein_id=WP_003900680.1;transl_table=11 NZ_KK316859.1 RefSeq gene 72065 73642 . - . ID=gene-AL60_RS23625;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AL60_RS23625;old_locus_tag=AL60_03697 NZ_KK316859.1 Protein Homology CDS 72065 73642 . - 0 ID=cds-WP_003417952.1;Parent=gene-AL60_RS23625;Dbxref=GenBank:WP_003417952.1;Name=WP_003417952.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217913.1;locus_tag=AL60_RS23625;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_003417952.1;transl_table=11 NZ_KK316859.1 RefSeq gene 73654 74562 . - . ID=gene-AL60_RS23630;Name=hpnD;gbkey=Gene;gene=hpnD;gene_biotype=protein_coding;locus_tag=AL60_RS23630;old_locus_tag=AL60_03698 NZ_KK316859.1 Protein Homology CDS 73654 74562 . - 0 ID=cds-WP_003417954.1;Parent=gene-AL60_RS23630;Dbxref=GenBank:WP_003417954.1;Name=WP_003417954.1;Ontology_term=GO:0016117,GO:0046905;gbkey=CDS;gene=hpnD;go_function=15-cis-phytoene synthase activity|0046905||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217914.1;locus_tag=AL60_RS23630;product=presqualene diphosphate synthase HpnD;protein_id=WP_003417954.1;transl_table=11 NZ_KK316859.1 RefSeq gene 74591 75670 . - . ID=gene-AL60_RS23635;Name=idsA1;gbkey=Gene;gene=idsA1;gene_biotype=protein_coding;locus_tag=AL60_RS23635;old_locus_tag=AL60_03699 NZ_KK316859.1 Protein Homology CDS 74591 75670 . - 0 ID=cds-WP_003417957.1;Parent=gene-AL60_RS23635;Dbxref=GenBank:WP_003417957.1;Name=WP_003417957.1;gbkey=CDS;gene=idsA1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177970.1;locus_tag=AL60_RS23635;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_003417957.1;transl_table=11 NZ_KK316859.1 RefSeq gene 75819 76739 . + . ID=gene-AL60_RS23640;Name=AL60_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23640;old_locus_tag=AL60_03700 NZ_KK316859.1 Protein Homology CDS 75819 76739 . + 0 ID=cds-WP_003912218.1;Parent=gene-AL60_RS23640;Dbxref=GenBank:WP_003912218.1;Name=WP_003912218.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936179.1;locus_tag=AL60_RS23640;product=class I SAM-dependent methyltransferase;protein_id=WP_003912218.1;transl_table=11 NZ_KK316859.1 RefSeq gene 76803 77591 . + . ID=gene-AL60_RS23645;Name=AL60_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23645;old_locus_tag=AL60_03701 NZ_KK316859.1 Protein Homology CDS 76803 77591 . + 0 ID=cds-WP_003417961.1;Parent=gene-AL60_RS23645;Dbxref=GenBank:WP_003417961.1;Name=WP_003417961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217917.1;locus_tag=AL60_RS23645;product=beta-phosphoglucomutase family hydrolase;protein_id=WP_003417961.1;transl_table=11 NZ_KK316859.1 RefSeq gene 77606 79966 . + . ID=gene-AL60_RS23650;Name=AL60_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23650;old_locus_tag=AL60_03702 NZ_KK316859.1 Protein Homology CDS 77606 79966 . + 0 ID=cds-WP_003900047.1;Parent=gene-AL60_RS23650;Dbxref=GenBank:WP_003900047.1;Name=WP_003900047.1;Ontology_term=GO:0005975,GO:0016787,GO:0030246;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217918.1;locus_tag=AL60_RS23650;product=glycoside hydrolase family 65 protein;protein_id=WP_003900047.1;transl_table=11 NZ_KK316859.1 RefSeq gene 80012 80224 . - . ID=gene-AL60_RS26515;Name=AL60_RS26515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26515 NZ_KK316859.1 Protein Homology CDS 80012 80224 . - 0 ID=cds-WP_003915386.1;Parent=gene-AL60_RS26515;Dbxref=GenBank:WP_003915386.1;Name=WP_003915386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915386.1;locus_tag=AL60_RS26515;product=hypothetical protein;protein_id=WP_003915386.1;transl_table=11 NZ_KK316859.1 RefSeq gene 80217 81455 . - . ID=gene-AL60_RS23655;Name=AL60_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23655;old_locus_tag=AL60_03703 NZ_KK316859.1 Protein Homology CDS 80217 81455 . - 0 ID=cds-WP_003900048.1;Parent=gene-AL60_RS23655;Dbxref=GenBank:WP_003900048.1;Name=WP_003900048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217919.1;locus_tag=AL60_RS23655;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_003900048.1;transl_table=11 NZ_KK316859.1 RefSeq gene 81826 83427 . - . ID=gene-AL60_RS23660;Name=AL60_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23660;old_locus_tag=AL60_03704 NZ_KK316859.1 Protein Homology CDS 81826 83427 . - 0 ID=cds-WP_003417969.1;Parent=gene-AL60_RS23660;Dbxref=GenBank:WP_003417969.1;Name=WP_003417969.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217920.1;locus_tag=AL60_RS23660;product=FAD/NAD(P)-binding protein;protein_id=WP_003417969.1;transl_table=11 NZ_KK316859.1 RefSeq gene 83444 84148 . - . ID=gene-AL60_RS23665;Name=AL60_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23665;old_locus_tag=AL60_03705 NZ_KK316859.1 Protein Homology CDS 83444 84148 . - 0 ID=cds-WP_003417980.1;Parent=gene-AL60_RS23665;Dbxref=GenBank:WP_003417980.1;Name=WP_003417980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217921.1;locus_tag=AL60_RS23665;product=dTDP-4-amino-4%2C6-dideoxyglucose formyltransferase;protein_id=WP_003417980.1;transl_table=11 NZ_KK316859.1 RefSeq gene 84266 84832 . - . ID=gene-AL60_RS23670;Name=AL60_RS23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23670;old_locus_tag=AL60_03706 NZ_KK316859.1 Protein Homology CDS 84266 84832 . - 0 ID=cds-WP_003417984.1;Parent=gene-AL60_RS23670;Dbxref=GenBank:WP_003417984.1;Name=WP_003417984.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217922.1;locus_tag=AL60_RS23670;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003417984.1;transl_table=11 NZ_KK316859.1 RefSeq gene 84894 85781 . + . ID=gene-AL60_RS23675;Name=AL60_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23675;old_locus_tag=AL60_03707 NZ_KK316859.1 Protein Homology CDS 84894 85781 . + 0 ID=cds-WP_003900050.1;Parent=gene-AL60_RS23675;Dbxref=GenBank:WP_003900050.1;Name=WP_003900050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217923.1;locus_tag=AL60_RS23675;product=alpha-ketoglutarate-dependent sulfate ester dioxygenase;protein_id=WP_003900050.1;transl_table=11 NZ_KK316859.1 RefSeq gene 85837 86115 . + . ID=gene-AL60_RS23680;Name=AL60_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23680;old_locus_tag=AL60_03708 NZ_KK316859.1 Protein Homology CDS 85837 86115 . + 0 ID=cds-WP_003912220.1;Parent=gene-AL60_RS23680;Dbxref=GenBank:WP_003912220.1;Name=WP_003912220.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912220.1;locus_tag=AL60_RS23680;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003912220.1;transl_table=11 NZ_KK316859.1 RefSeq gene 86112 86522 . + . ID=gene-AL60_RS23685;Name=AL60_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23685;old_locus_tag=AL60_03709 NZ_KK316859.1 Protein Homology CDS 86112 86522 . + 0 ID=cds-WP_003417998.1;Parent=gene-AL60_RS23685;Dbxref=GenBank:WP_003417998.1;Name=WP_003417998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217925.1;locus_tag=AL60_RS23685;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003417998.1;transl_table=11 NZ_KK316859.1 RefSeq gene 86555 88291 . - . ID=gene-AL60_RS23690;Name=choD;gbkey=Gene;gene=choD;gene_biotype=protein_coding;locus_tag=AL60_RS23690;old_locus_tag=AL60_03710 NZ_KK316859.1 Protein Homology CDS 86555 88291 . - 0 ID=cds-WP_003418002.1;Parent=gene-AL60_RS23690;Dbxref=GenBank:WP_003418002.1;Name=WP_003418002.1;gbkey=CDS;gene=choD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217926.1;locus_tag=AL60_RS23690;product=cholesterol oxidase;protein_id=WP_003418002.1;transl_table=11 NZ_KK316859.1 RefSeq gene 88347 89474 . - . ID=gene-AL60_RS23695;Name=AL60_RS23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23695;old_locus_tag=AL60_03711 NZ_KK316859.1 Protein Homology CDS 88347 89474 . - 0 ID=cds-WP_003418005.1;Parent=gene-AL60_RS23695;Dbxref=GenBank:WP_003418005.1;Name=WP_003418005.1;Ontology_term=GO:0003938;gbkey=CDS;go_function=IMP dehydrogenase activity|0003938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217927.1;locus_tag=AL60_RS23695;product=GuaB3 family IMP dehydrogenase-related protein;protein_id=WP_003418005.1;transl_table=11 NZ_KK316859.1 RefSeq gene 89494 91083 . - . ID=gene-AL60_RS23700;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AL60_RS23700;old_locus_tag=AL60_03712 NZ_KK316859.1 Protein Homology CDS 89494 91083 . - 0 ID=cds-WP_003900682.1;Parent=gene-AL60_RS23700;Dbxref=GenBank:WP_003900682.1;Name=WP_003900682.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217928.1;locus_tag=AL60_RS23700;product=IMP dehydrogenase;protein_id=WP_003900682.1;transl_table=11 NZ_KK316859.1 RefSeq gene 91290 91700 . + . ID=gene-AL60_RS23705;Name=AL60_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23705;old_locus_tag=AL60_03713 NZ_KK316859.1 Protein Homology CDS 91290 91700 . + 0 ID=cds-WP_003418008.1;Parent=gene-AL60_RS23705;Dbxref=GenBank:WP_003418008.1;Name=WP_003418008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217929.1;locus_tag=AL60_RS23705;product=DUF5319 domain-containing protein;protein_id=WP_003418008.1;transl_table=11 NZ_KK316859.1 RefSeq gene 91710 92609 . - . ID=gene-AL60_RS23710;Name=rsdA;gbkey=Gene;gene=rsdA;gene_biotype=protein_coding;locus_tag=AL60_RS23710;old_locus_tag=AL60_03714 NZ_KK316859.1 Protein Homology CDS 91710 92609 . - 0 ID=cds-WP_003418011.1;Parent=gene-AL60_RS23710;Dbxref=GenBank:WP_003418011.1;Name=WP_003418011.1;gbkey=CDS;gene=rsdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217930.1;locus_tag=AL60_RS23710;product=anti-sigma D factor RsdA;protein_id=WP_003418011.1;transl_table=11 NZ_KK316859.1 RefSeq gene 92602 93177 . - . ID=gene-AL60_RS23715;Name=sigD;gbkey=Gene;gene=sigD;gene_biotype=protein_coding;locus_tag=AL60_RS23715;old_locus_tag=AL60_03715 NZ_KK316859.1 Protein Homology CDS 92602 93177 . - 0 ID=cds-WP_003917787.1;Parent=gene-AL60_RS23715;Dbxref=GenBank:WP_003917787.1;Name=WP_003917787.1;gbkey=CDS;gene=sigD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917787.1;locus_tag=AL60_RS23715;product=ECF RNA polymerase sigma factor SigD;protein_id=WP_003917787.1;transl_table=11 NZ_KK316859.1 RefSeq gene 93258 94085 . - . ID=gene-AL60_RS23720;Name=AL60_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23720;old_locus_tag=AL60_03716 NZ_KK316859.1 Protein Homology CDS 93258 94085 . - 0 ID=cds-WP_003900051.1;Parent=gene-AL60_RS23720;Dbxref=GenBank:WP_003900051.1;Name=WP_003900051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217932.1;locus_tag=AL60_RS23720;product=hypothetical protein;protein_id=WP_003900051.1;transl_table=11 NZ_KK316859.1 RefSeq gene 94456 94764 . + . ID=gene-AL60_RS23725;Name=whiB3;gbkey=Gene;gene=whiB3;gene_biotype=protein_coding;locus_tag=AL60_RS23725;old_locus_tag=AL60_03717 NZ_KK316859.1 Protein Homology CDS 94456 94764 . + 0 ID=cds-WP_003418017.1;Parent=gene-AL60_RS23725;Dbxref=GenBank:WP_003418017.1;Name=WP_003418017.1;gbkey=CDS;gene=whiB3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217933.1;locus_tag=AL60_RS23725;product=redox-responsive transcriptional regulator WhiB3;protein_id=WP_003418017.1;transl_table=11 NZ_KK316859.1 RefSeq gene 94836 96455 . - . ID=gene-AL60_RS23730;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AL60_RS23730;old_locus_tag=AL60_03718 NZ_KK316859.1 Protein Homology CDS 94836 96455 . - 0 ID=cds-WP_003418021.1;Parent=gene-AL60_RS23730;Dbxref=GenBank:WP_003418021.1;Name=WP_003418021.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217934.1;locus_tag=AL60_RS23730;product=chaperonin GroEL;protein_id=WP_003418021.1;transl_table=11 NZ_KK316859.1 RefSeq gene 96550 96852 . - . ID=gene-AL60_RS23735;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=AL60_RS23735;old_locus_tag=AL60_03719 NZ_KK316859.1 Protein Homology CDS 96550 96852 . - 0 ID=cds-WP_003418028.1;Parent=gene-AL60_RS23735;Dbxref=GenBank:WP_003418028.1;Name=WP_003418028.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003929249.1;locus_tag=AL60_RS23735;product=co-chaperone GroES;protein_id=WP_003418028.1;transl_table=11 NZ_KK316859.1 RefSeq gene 97119 98153 . - . ID=gene-AL60_RS23740;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=AL60_RS23740;old_locus_tag=AL60_03720 NZ_KK316859.1 Protein Homology CDS 97119 98153 . - 0 ID=cds-WP_003900052.1;Parent=gene-AL60_RS23740;Dbxref=GenBank:WP_003900052.1;Name=WP_003900052.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217936.1;locus_tag=AL60_RS23740;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_003900052.1;transl_table=11 NZ_KK316859.1 RefSeq gene 98150 98626 . - . ID=gene-AL60_RS23745;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=AL60_RS23745;old_locus_tag=AL60_03721 NZ_KK316859.1 Protein Homology CDS 98150 98626 . - 0 ID=cds-WP_003418034.1;Parent=gene-AL60_RS23745;Dbxref=GenBank:WP_003418034.1;Name=WP_003418034.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217937.1;locus_tag=AL60_RS23745;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_003418034.1;transl_table=11 NZ_KK316859.1 RefSeq gene 98623 99258 . - . ID=gene-AL60_RS23750;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=AL60_RS23750;old_locus_tag=AL60_03722 NZ_KK316859.1 Protein Homology CDS 98623 99258 . - 0 ID=cds-WP_003418038.1;Parent=gene-AL60_RS23750;Dbxref=GenBank:WP_003418038.1;Name=WP_003418038.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217938.1;locus_tag=AL60_RS23750;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_003418038.1;transl_table=11 NZ_KK316859.1 RefSeq gene 99255 99761 . - . ID=gene-AL60_RS23755;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=AL60_RS23755;old_locus_tag=AL60_03723 NZ_KK316859.1 Protein Homology CDS 99255 99761 . - 0 ID=cds-WP_003418042.1;Parent=gene-AL60_RS23755;Dbxref=GenBank:WP_003418042.1;Name=WP_003418042.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217939.1;locus_tag=AL60_RS23755;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_003418042.1;transl_table=11 NZ_KK316859.1 RefSeq gene 99758 100918 . - . ID=gene-AL60_RS23760;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AL60_RS23760;old_locus_tag=AL60_03724 NZ_KK316859.1 Protein Homology CDS 99758 100918 . - 0 ID=cds-WP_023637501.1;Parent=gene-AL60_RS23760;Dbxref=GenBank:WP_023637501.1;Name=WP_023637501.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303874.1;locus_tag=AL60_RS23760;product=alanine racemase;protein_id=WP_023637501.1;transl_table=11 NZ_KK316859.1 RefSeq gene 100944 101174 . + . ID=gene-AL60_RS26520;Name=AL60_RS26520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26520 NZ_KK316859.1 Protein Homology CDS 100944 101174 . + 0 ID=cds-WP_003900685.1;Parent=gene-AL60_RS26520;Dbxref=GenBank:WP_003900685.1;Name=WP_003900685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900685.1;locus_tag=AL60_RS26520;product=histone acetyltransferase;protein_id=WP_003900685.1;transl_table=11 ##sequence-region NZ_KK316860.1 1 99840 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316860.1 RefSeq region 1 99840 . + . ID=NZ_KK316860.1:1..99840;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316860.1 RefSeq gene 1 427 . + . ID=gene-AL60_RS23765;Name=AL60_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23765;old_locus_tag=AL60_03725;partial=true;start_range=.,1 NZ_KK316860.1 Protein Homology CDS 1 427 . + 1 ID=cds-WP_031716993.1;Parent=gene-AL60_RS23765;Dbxref=GenBank:WP_031716993.1;Name=WP_031716993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177971.1;locus_tag=AL60_RS23765;partial=true;product=PPE family protein;protein_id=WP_031716993.1;start_range=.,1;transl_table=11 NZ_KK316860.1 RefSeq gene 694 1224 . + . ID=gene-AL60_RS23770;Name=AL60_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23770;old_locus_tag=AL60_03726 NZ_KK316860.1 Protein Homology CDS 694 1224 . + 0 ID=cds-WP_003418122.1;Parent=gene-AL60_RS23770;Dbxref=GenBank:WP_003418122.1;Name=WP_003418122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012054359.1;locus_tag=AL60_RS23770;product=PPE family protein;protein_id=WP_003418122.1;transl_table=11 NZ_KK316860.1 RefSeq gene 1542 2297 . - . ID=gene-AL60_RS27260;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AL60_RS27260;old_locus_tag=AL60_03727 NZ_KK316860.1 Protein Homology CDS 1542 2297 . - 0 ID=cds-WP_003418125.1;Parent=gene-AL60_RS27260;Dbxref=GenBank:WP_003418125.1;Name=WP_003418125.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217944.1;locus_tag=AL60_RS27260;product=IS21-like element ISMt2 family helper ATPase IstB;protein_id=WP_003418125.1;transl_table=11 NZ_KK316860.1 RefSeq pseudogene 2367 3906 . - . ID=gene-AL60_RS27265;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=AL60_RS27265;old_locus_tag=AL60_03728;partial=true;pseudo=true;start_range=.,2367 NZ_KK316860.1 Protein Homology CDS 2367 3906 . - 0 ID=cds-AL60_RS27265;Parent=gene-AL60_RS27265;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_176223647.1;locus_tag=AL60_RS27265;partial=true;product=IS21-like element ISMt2 family transposase;pseudo=true;start_range=.,2367;transl_table=11 NZ_KK316860.1 RefSeq pseudogene 4298 4659 . - . ID=gene-AL60_RS26535;Name=AL60_RS26535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26535;pseudo=true NZ_KK316860.1 Protein Homology CDS 4298 4659 . - 0 ID=cds-AL60_RS26535;Parent=gene-AL60_RS26535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217941.1;locus_tag=AL60_RS26535;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316860.1 RefSeq gene 4822 5190 . + . ID=gene-AL60_RS0105435;Name=AL60_RS0105435;end_range=5190,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105435;partial=true NZ_KK316860.1 Protein Homology CDS 4822 5190 . + 0 ID=cds-WP_031721520.1;Parent=gene-AL60_RS0105435;Dbxref=GenBank:WP_031721520.1;Name=WP_031721520.1;end_range=5190,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177971.1;locus_tag=AL60_RS0105435;partial=true;product=PPE family protein;protein_id=WP_031721520.1;transl_table=11 NZ_KK316860.1 RefSeq gene 6326 6625 . + . ID=gene-AL60_RS23780;Name=AL60_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23780;old_locus_tag=AL60_03729 NZ_KK316860.1 Protein Homology CDS 6326 6625 . + 0 ID=cds-WP_003901635.1;Parent=gene-AL60_RS23780;Dbxref=GenBank:WP_003901635.1;Name=WP_003901635.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901635.1;locus_tag=AL60_RS23780;product=PE family protein;protein_id=WP_003901635.1;transl_table=11 NZ_KK316860.1 RefSeq gene 6711 7253 . + . ID=gene-AL60_RS23785;Name=AL60_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23785;old_locus_tag=AL60_03730 NZ_KK316860.1 Protein Homology CDS 6711 7253 . + 0 ID=cds-WP_003418141.1;Parent=gene-AL60_RS23785;Dbxref=GenBank:WP_003418141.1;Name=WP_003418141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294407.1;locus_tag=AL60_RS23785;product=PPE family protein;protein_id=WP_003418141.1;transl_table=11 NZ_KK316860.1 RefSeq gene 7344 7739 . + . ID=gene-AL60_RS23790;Name=AL60_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23790;old_locus_tag=AL60_03731 NZ_KK316860.1 Protein Homology CDS 7344 7739 . + 0 ID=cds-WP_003418146.1;Parent=gene-AL60_RS23790;Dbxref=GenBank:WP_003418146.1;Name=WP_003418146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001737.1;locus_tag=AL60_RS23790;product=PE/PPE C-terminal domain-containing protein;protein_id=WP_003418146.1;transl_table=11 NZ_KK316860.1 RefSeq gene 7766 7891 . - . ID=gene-AL60_RS28195;Name=AL60_RS28195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28195 NZ_KK316860.1 Protein Homology CDS 7766 7891 . - 0 ID=cds-WP_009940399.1;Parent=gene-AL60_RS28195;Dbxref=GenBank:WP_009940399.1;Name=WP_009940399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940399.1;locus_tag=AL60_RS28195;product=hypothetical protein;protein_id=WP_009940399.1;transl_table=11 NZ_KK316860.1 RefSeq gene 8622 8984 . - . ID=gene-AL60_RS0105445;Name=AL60_RS0105445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105445 NZ_KK316860.1 Protein Homology CDS 8622 8984 . - 0 ID=cds-WP_003904310.1;Parent=gene-AL60_RS0105445;Dbxref=GenBank:WP_003904310.1;Name=WP_003904310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217941.1;locus_tag=AL60_RS0105445;product=hypothetical protein;protein_id=WP_003904310.1;transl_table=11 NZ_KK316860.1 RefSeq gene 9147 9683 . + . ID=gene-AL60_RS23795;Name=AL60_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23795;old_locus_tag=AL60_03732 NZ_KK316860.1 Protein Homology CDS 9147 9683 . + 0 ID=cds-WP_003900053.1;Parent=gene-AL60_RS23795;Dbxref=GenBank:WP_003900053.1;Name=WP_003900053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177973.1;locus_tag=AL60_RS23795;product=PPE family protein;protein_id=WP_003900053.1;transl_table=11 NZ_KK316860.1 RefSeq pseudogene 9740 10787 . - . ID=gene-AL60_RS23800;Name=AL60_RS23800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS23800;old_locus_tag=AL60_03733;pseudo=true NZ_KK316860.1 Protein Homology CDS 9740 10787 . - 0 ID=cds-AL60_RS23800;Parent=gene-AL60_RS23800;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558364.1;locus_tag=AL60_RS23800;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_KK316860.1 RefSeq gene 10826 10981 . - . ID=gene-AL60_RS26970;Name=AL60_RS26970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26970 NZ_KK316860.1 Protein Homology CDS 10826 10981 . - 0 ID=cds-WP_003418266.1;Parent=gene-AL60_RS26970;Dbxref=GenBank:WP_003418266.1;Name=WP_003418266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030046.1;locus_tag=AL60_RS26970;product=hypothetical protein;protein_id=WP_003418266.1;transl_table=11 NZ_KK316860.1 RefSeq gene 11006 11161 . - . ID=gene-AL60_RS27270;Name=AL60_RS27270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27270 NZ_KK316860.1 GeneMarkS-2+ CDS 11006 11161 . - 0 ID=cds-WP_003917789.1;Parent=gene-AL60_RS27270;Dbxref=GenBank:WP_003917789.1;Name=WP_003917789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS27270;product=hypothetical protein;protein_id=WP_003917789.1;transl_table=11 NZ_KK316860.1 RefSeq pseudogene 11288 12136 . - . ID=gene-AL60_RS23805;Name=AL60_RS23805;end_range=12136,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS23805;old_locus_tag=AL60_03734;partial=true;pseudo=true;start_range=.,11288 NZ_KK316860.1 Protein Homology CDS 11288 12136 . - 0 ID=cds-AL60_RS23805;Parent=gene-AL60_RS23805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=12136,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032488867.1;locus_tag=AL60_RS23805;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,11288;transl_table=11 NZ_KK316860.1 RefSeq gene 12354 13736 . - . ID=gene-AL60_RS23810;Name=gadB;gbkey=Gene;gene=gadB;gene_biotype=protein_coding;locus_tag=AL60_RS23810;old_locus_tag=AL60_03735 NZ_KK316860.1 Protein Homology CDS 12354 13736 . - 0 ID=cds-WP_003418277.1;Parent=gene-AL60_RS23810;Dbxref=GenBank:WP_003418277.1;Name=WP_003418277.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;gene=gadB;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217949.1;locus_tag=AL60_RS23810;product=glutamate decarboxylase;protein_id=WP_003418277.1;transl_table=11 NZ_KK316860.1 RefSeq gene 13774 15195 . - . ID=gene-AL60_RS23815;Name=AL60_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23815;old_locus_tag=AL60_03736 NZ_KK316860.1 Protein Homology CDS 13774 15195 . - 0 ID=cds-WP_003912231.1;Parent=gene-AL60_RS23815;Dbxref=GenBank:WP_003912231.1;Name=WP_003912231.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217950.1;locus_tag=AL60_RS23815;product=NAD(P)H-hydrate dehydratase;protein_id=WP_003912231.1;transl_table=11 NZ_KK316860.1 RefSeq pseudogene 15197 15911 . - . ID=gene-AL60_RS0105460;Name=AL60_RS0105460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0105460;old_locus_tag=AL60_03737;pseudo=true NZ_KK316860.1 Protein Homology CDS 15197 15911 . - 0 ID=cds-AL60_RS0105460;Parent=gene-AL60_RS0105460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217951.1;locus_tag=AL60_RS0105460;product=rhomboid-like protein;pseudo=true;transl_table=11 NZ_KK316860.1 RefSeq gene 15922 16776 . - . ID=gene-AL60_RS23820;Name=AL60_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23820;old_locus_tag=AL60_03738 NZ_KK316860.1 Protein Homology CDS 15922 16776 . - 0 ID=cds-WP_003901640.1;Parent=gene-AL60_RS23820;Dbxref=GenBank:WP_003901640.1;Name=WP_003901640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217952.1;locus_tag=AL60_RS23820;product=DUF4436 domain-containing protein;protein_id=WP_003901640.1;transl_table=11 NZ_KK316860.1 RefSeq gene 16998 18872 . - . ID=gene-AL60_RS23825;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AL60_RS23825;old_locus_tag=AL60_03739 NZ_KK316860.1 Protein Homology CDS 16998 18872 . - 0 ID=cds-WP_003418289.1;Parent=gene-AL60_RS23825;Dbxref=GenBank:WP_003418289.1;Name=WP_003418289.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217953.1;locus_tag=AL60_RS23825;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_003418289.1;transl_table=11 NZ_KK316860.1 RefSeq gene 18894 19370 . + . ID=gene-AL60_RS23830;Name=AL60_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23830;old_locus_tag=AL60_03740 NZ_KK316860.1 Protein Homology CDS 18894 19370 . + 0 ID=cds-WP_003900057.1;Parent=gene-AL60_RS23830;Dbxref=GenBank:WP_003900057.1;Name=WP_003900057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217954.1;locus_tag=AL60_RS23830;product=DUF2510 domain-containing protein;protein_id=WP_003900057.1;transl_table=11 NZ_KK316860.1 RefSeq gene 19380 20222 . + . ID=gene-AL60_RS23835;Name=AL60_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23835;old_locus_tag=AL60_03741 NZ_KK316860.1 Protein Homology CDS 19380 20222 . + 0 ID=cds-WP_003418298.1;Parent=gene-AL60_RS23835;Dbxref=GenBank:WP_003418298.1;Name=WP_003418298.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217955.1;locus_tag=AL60_RS23835;product=dienelactone hydrolase family protein;protein_id=WP_003418298.1;transl_table=11 NZ_KK316860.1 RefSeq gene 20242 21645 . - . ID=gene-AL60_RS23840;Name=AL60_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23840;old_locus_tag=AL60_03742 NZ_KK316860.1 Protein Homology CDS 20242 21645 . - 0 ID=cds-WP_012054361.1;Parent=gene-AL60_RS23840;Dbxref=GenBank:WP_012054361.1;Name=WP_012054361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217956.1;locus_tag=AL60_RS23840;product=hypothetical protein;protein_id=WP_012054361.1;transl_table=11 NZ_KK316860.1 RefSeq gene 21648 21959 . - . ID=gene-AL60_RS23845;Name=AL60_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23845;old_locus_tag=AL60_03743 NZ_KK316860.1 Protein Homology CDS 21648 21959 . - 0 ID=cds-WP_003418301.1;Parent=gene-AL60_RS23845;Dbxref=GenBank:WP_003418301.1;Name=WP_003418301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217957.1;locus_tag=AL60_RS23845;product=hypothetical protein;protein_id=WP_003418301.1;transl_table=11 NZ_KK316860.1 RefSeq gene 22007 23353 . - . ID=gene-AL60_RS23850;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AL60_RS23850;old_locus_tag=AL60_03744 NZ_KK316860.1 Protein Homology CDS 22007 23353 . - 0 ID=cds-WP_003418304.1;Parent=gene-AL60_RS23850;Dbxref=GenBank:WP_003418304.1;Name=WP_003418304.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217958.1;locus_tag=AL60_RS23850;product=phosphoglucosamine mutase;protein_id=WP_003418304.1;transl_table=11 NZ_KK316860.1 RefSeq gene 23478 23933 . - . ID=gene-AL60_RS23855;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AL60_RS23855;old_locus_tag=AL60_03745 NZ_KK316860.1 Protein Homology CDS 23478 23933 . - 0 ID=cds-WP_003418308.1;Parent=gene-AL60_RS23855;Dbxref=GenBank:WP_003418308.1;Name=WP_003418308.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217959.1;locus_tag=AL60_RS23855;product=30S ribosomal protein S9;protein_id=WP_003418308.1;transl_table=11 NZ_KK316860.1 RefSeq gene 23930 24373 . - . ID=gene-AL60_RS23860;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AL60_RS23860;old_locus_tag=AL60_03746 NZ_KK316860.1 Protein Homology CDS 23930 24373 . - 0 ID=cds-WP_003418312.1;Parent=gene-AL60_RS23860;Dbxref=GenBank:WP_003418312.1;Name=WP_003418312.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217960.1;locus_tag=AL60_RS23860;product=50S ribosomal protein L13;protein_id=WP_003418312.1;transl_table=11 NZ_KK316860.1 RefSeq gene 24606 24908 . - . ID=gene-AL60_RS23865;Name=esxT;gbkey=Gene;gene=esxT;gene_biotype=protein_coding;locus_tag=AL60_RS23865;old_locus_tag=AL60_03747 NZ_KK316860.1 Protein Homology CDS 24606 24908 . - 0 ID=cds-WP_003900059.1;Parent=gene-AL60_RS23865;Dbxref=GenBank:WP_003900059.1;Name=WP_003900059.1;Ontology_term=GO:0005576;gbkey=CDS;gene=esxT;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217961.1;locus_tag=AL60_RS23865;product=WXG100 family type VII secretion target;protein_id=WP_003900059.1;transl_table=11 NZ_KK316860.1 RefSeq gene 24929 25246 . - . ID=gene-AL60_RS23870;Name=esxU;gbkey=Gene;gene=esxU;gene_biotype=protein_coding;locus_tag=AL60_RS23870;old_locus_tag=AL60_03748 NZ_KK316860.1 Protein Homology CDS 24929 25246 . - 0 ID=cds-WP_003900060.1;Parent=gene-AL60_RS23870;Dbxref=GenBank:WP_003900060.1;Name=WP_003900060.1;gbkey=CDS;gene=esxU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217962.2;locus_tag=AL60_RS23870;product=type VII secretion system ESX-4 protein EsxU;protein_id=WP_003900060.1;transl_table=11 NZ_KK316860.1 RefSeq gene 25299 26513 . - . ID=gene-AL60_RS23875;Name=AL60_RS23875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23875;old_locus_tag=AL60_03749 NZ_KK316860.1 Protein Homology CDS 25299 26513 . - 0 ID=cds-WP_003418324.1;Parent=gene-AL60_RS23875;Dbxref=GenBank:WP_003418324.1;Name=WP_003418324.1;Ontology_term=GO:0009306;gbkey=CDS;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217963.1;locus_tag=AL60_RS23875;product=type VII secretion-associated protein;protein_id=WP_003418324.1;transl_table=11 NZ_KK316860.1 RefSeq gene 26510 30220 . - . ID=gene-AL60_RS23880;Name=eccC4;gbkey=Gene;gene=eccC4;gene_biotype=protein_coding;locus_tag=AL60_RS23880;old_locus_tag=AL60_03750 NZ_KK316860.1 Protein Homology CDS 26510 30220 . - 0 ID=cds-WP_003418326.1;Parent=gene-AL60_RS23880;Dbxref=GenBank:WP_003418326.1;Name=WP_003418326.1;gbkey=CDS;gene=eccC4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217964.1;locus_tag=AL60_RS23880;product=type VII secretion system ESX-4 FtsK/SpoIIIE family ATPase EccC4;protein_id=WP_003418326.1;transl_table=11 NZ_KK316860.1 RefSeq gene 30334 31737 . + . ID=gene-AL60_RS23885;Name=eccD4;gbkey=Gene;gene=eccD4;gene_biotype=protein_coding;locus_tag=AL60_RS23885;old_locus_tag=AL60_03751 NZ_KK316860.1 Protein Homology CDS 30334 31737 . + 0 ID=cds-WP_003900062.1;Parent=gene-AL60_RS23885;Dbxref=GenBank:WP_003900062.1;Name=WP_003900062.1;gbkey=CDS;gene=eccD4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217965.1;locus_tag=AL60_RS23885;product=type VII secretion system ESX-4 subunit EccD4;protein_id=WP_003900062.1;transl_table=11 NZ_KK316860.1 RefSeq gene 31734 33101 . + . ID=gene-AL60_RS23890;Name=mycP4;gbkey=Gene;gene=mycP4;gene_biotype=protein_coding;locus_tag=AL60_RS23890;old_locus_tag=AL60_03752 NZ_KK316860.1 Protein Homology CDS 31734 33101 . + 0 ID=cds-WP_003418331.1;Parent=gene-AL60_RS23890;Dbxref=GenBank:WP_003418331.1;Name=WP_003418331.1;gbkey=CDS;gene=mycP4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217966.1;locus_tag=AL60_RS23890;product=type VII secretion system ESX-4 serine protease mycosin MycP4;protein_id=WP_003418331.1;transl_table=11 NZ_KK316860.1 RefSeq gene 33066 34478 . - . ID=gene-AL60_RS23895;Name=eccB4;gbkey=Gene;gene=eccB4;gene_biotype=protein_coding;locus_tag=AL60_RS23895;old_locus_tag=AL60_03753 NZ_KK316860.1 Protein Homology CDS 33066 34478 . - 0 ID=cds-WP_003418333.1;Parent=gene-AL60_RS23895;Dbxref=GenBank:WP_003418333.1;Name=WP_003418333.1;gbkey=CDS;gene=eccB4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217967.1;locus_tag=AL60_RS23895;product=type VII secretion system ESX-4 subunit EccB4;protein_id=WP_003418333.1;transl_table=11 NZ_KK316860.1 RefSeq gene 34599 35387 . + . ID=gene-AL60_RS23900;Name=AL60_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23900;old_locus_tag=AL60_03754 NZ_KK316860.1 Protein Homology CDS 34599 35387 . + 0 ID=cds-WP_003907059.1;Parent=gene-AL60_RS23900;Dbxref=GenBank:WP_003907059.1;Name=WP_003907059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217968.2;locus_tag=AL60_RS23900;product=cutinase family protein;protein_id=WP_003907059.1;transl_table=11 NZ_KK316860.1 RefSeq gene 35434 36114 . + . ID=gene-AL60_RS23905;Name=cut4;gbkey=Gene;gene=cut4;gene_biotype=protein_coding;locus_tag=AL60_RS23905;old_locus_tag=AL60_03755 NZ_KK316860.1 Protein Homology CDS 35434 36114 . + 0 ID=cds-WP_031721521.1;Parent=gene-AL60_RS23905;Dbxref=GenBank:WP_031721521.1;Name=WP_031721521.1;gbkey=CDS;gene=cut4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217969.1;locus_tag=AL60_RS23905;product=cutinase Cut4;protein_id=WP_031721521.1;transl_table=11 NZ_KK316860.1 RefSeq pseudogene 36386 38072 . + . ID=gene-AL60_RS23915;Name=AL60_RS23915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS23915;old_locus_tag=AL60_03757;pseudo=true NZ_KK316860.1 Protein Homology CDS 36386 38072 . + 0 ID=cds-AL60_RS23915;Parent=gene-AL60_RS23915;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719627.1;locus_tag=AL60_RS23915;product=purine-cytosine permease family protein;pseudo=true;transl_table=11 NZ_KK316860.1 RefSeq gene 38034 38927 . - . ID=gene-AL60_RS23920;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AL60_RS23920;old_locus_tag=AL60_03758 NZ_KK316860.1 Protein Homology CDS 38034 38927 . - 0 ID=cds-WP_003418344.1;Parent=gene-AL60_RS23920;Dbxref=GenBank:WP_003418344.1;Name=WP_003418344.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003418344.1;locus_tag=AL60_RS23920;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_003418344.1;transl_table=11 NZ_KK316860.1 RefSeq gene 38872 39414 . - . ID=gene-AL60_RS23925;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AL60_RS23925;old_locus_tag=AL60_03759 NZ_KK316860.1 Protein Homology CDS 38872 39414 . - 0 ID=cds-WP_003418346.1;Parent=gene-AL60_RS23925;Dbxref=GenBank:WP_003418346.1;Name=WP_003418346.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217973.1;locus_tag=AL60_RS23925;product=50S ribosomal protein L17;protein_id=WP_003418346.1;transl_table=11 NZ_KK316860.1 RefSeq gene 39446 40489 . - . ID=gene-AL60_RS23930;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=AL60_RS23930;old_locus_tag=AL60_03760 NZ_KK316860.1 Protein Homology CDS 39446 40489 . - 0 ID=cds-WP_003418351.1;Parent=gene-AL60_RS23930;Dbxref=GenBank:WP_003418351.1;Name=WP_003418351.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217974.1;locus_tag=AL60_RS23930;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_003418351.1;transl_table=11 NZ_KK316860.1 RefSeq gene 40641 41246 . - . ID=gene-AL60_RS23935;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AL60_RS23935;old_locus_tag=AL60_03761 NZ_KK316860.1 Protein Homology CDS 40641 41246 . - 0 ID=cds-WP_003418354.1;Parent=gene-AL60_RS23935;Dbxref=GenBank:WP_003418354.1;Name=WP_003418354.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217975.1;locus_tag=AL60_RS23935;product=30S ribosomal protein S4;protein_id=WP_003418354.1;transl_table=11 NZ_KK316860.1 RefSeq gene 41255 41674 . - . ID=gene-AL60_RS23940;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AL60_RS23940;old_locus_tag=AL60_03762 NZ_KK316860.1 Protein Homology CDS 41255 41674 . - 0 ID=cds-WP_003900064.1;Parent=gene-AL60_RS23940;Dbxref=GenBank:WP_003900064.1;Name=WP_003900064.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217976.1;locus_tag=AL60_RS23940;product=30S ribosomal protein S11;protein_id=WP_003900064.1;transl_table=11 NZ_KK316860.1 RefSeq gene 41678 42052 . - . ID=gene-AL60_RS23945;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AL60_RS23945;old_locus_tag=AL60_03763 NZ_KK316860.1 Protein Homology CDS 41678 42052 . - 0 ID=cds-WP_003418360.1;Parent=gene-AL60_RS23945;Dbxref=GenBank:WP_003418360.1;Name=WP_003418360.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217977.1;locus_tag=AL60_RS23945;product=30S ribosomal protein S13;protein_id=WP_003418360.1;transl_table=11 NZ_KK316860.1 RefSeq gene 42268 42381 . - . ID=gene-AL60_RS23950;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AL60_RS23950;old_locus_tag=AL60_03764 NZ_KK316860.1 Protein Homology CDS 42268 42381 . - 0 ID=cds-WP_003418367.1;Parent=gene-AL60_RS23950;Dbxref=GenBank:WP_003418367.1;Name=WP_003418367.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217978.1;locus_tag=AL60_RS23950;product=50S ribosomal protein L36;protein_id=WP_003418367.1;transl_table=11 NZ_KK316860.1 RefSeq gene 42414 42635 . - . ID=gene-AL60_RS23955;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AL60_RS23955;old_locus_tag=AL60_03765 NZ_KK316860.1 Protein Homology CDS 42414 42635 . - 0 ID=cds-WP_003418601.1;Parent=gene-AL60_RS23955;Dbxref=GenBank:WP_003418601.1;Name=WP_003418601.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012039277.1;locus_tag=AL60_RS23955;product=translation initiation factor IF-1;protein_id=WP_003418601.1;transl_table=11 NZ_KK316860.1 RefSeq gene 42889 43746 . + . ID=gene-AL60_RS23960;Name=AL60_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23960;old_locus_tag=AL60_03766 NZ_KK316860.1 Protein Homology CDS 42889 43746 . + 0 ID=cds-WP_003418604.1;Parent=gene-AL60_RS23960;Dbxref=GenBank:WP_003418604.1;Name=WP_003418604.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217980.1;locus_tag=AL60_RS23960;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003418604.1;transl_table=11 NZ_KK316860.1 RefSeq gene 43819 44814 . + . ID=gene-AL60_RS23965;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=AL60_RS23965;old_locus_tag=AL60_03767 NZ_KK316860.1 Protein Homology CDS 43819 44814 . + 0 ID=cds-WP_003418607.1;Parent=gene-AL60_RS23965;Dbxref=GenBank:WP_003418607.1;Name=WP_003418607.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217981.1;locus_tag=AL60_RS23965;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_003418607.1;transl_table=11 NZ_KK316860.1 RefSeq gene 44816 45424 . + . ID=gene-AL60_RS23970;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=AL60_RS23970;old_locus_tag=AL60_03768 NZ_KK316860.1 Protein Homology CDS 44816 45424 . + 0 ID=cds-WP_012054362.1;Parent=gene-AL60_RS23970;Dbxref=GenBank:WP_012054362.1;Name=WP_012054362.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217982.1;locus_tag=AL60_RS23970;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_012054362.1;transl_table=11 NZ_KK316860.1 RefSeq pseudogene 45507 46899 . + . ID=gene-AL60_RS23975;Name=AL60_RS23975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS23975;old_locus_tag=AL60_03770;pseudo=true NZ_KK316860.1 Protein Homology CDS 45507 46899 . + 0 ID=cds-AL60_RS23975;Parent=gene-AL60_RS23975;Note=frameshifted;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001758.1;locus_tag=AL60_RS23975;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_KK316860.1 RefSeq gene 46957 48051 . - . ID=gene-AL60_RS23980;Name=AL60_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23980;old_locus_tag=AL60_03771 NZ_KK316860.1 Protein Homology CDS 46957 48051 . - 0 ID=cds-WP_003900066.1;Parent=gene-AL60_RS23980;Dbxref=GenBank:WP_003900066.1;Name=WP_003900066.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914158.1;locus_tag=AL60_RS23980;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003900066.1;transl_table=11 NZ_KK316860.1 RefSeq gene 48055 49065 . - . ID=gene-AL60_RS23985;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=AL60_RS23985;old_locus_tag=AL60_03772 NZ_KK316860.1 Protein Homology CDS 48055 49065 . - 0 ID=cds-WP_003900067.1;Parent=gene-AL60_RS23985;Dbxref=GenBank:WP_003900067.1;Name=WP_003900067.1;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217986.1;locus_tag=AL60_RS23985;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_003900067.1;transl_table=11 NZ_KK316860.1 RefSeq gene 49126 50784 . - . ID=gene-AL60_RS23990;Name=AL60_RS23990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23990;old_locus_tag=AL60_03773 NZ_KK316860.1 Protein Homology CDS 49126 50784 . - 0 ID=cds-WP_003900704.1;Parent=gene-AL60_RS23990;Dbxref=GenBank:WP_003900704.1;Name=WP_003900704.1;Ontology_term=GO:0009097,GO:0009099,GO:0000287,GO:0030976,GO:0050660,GO:0005948;gbkey=CDS;go_component=acetolactate synthase complex|0005948||IEA;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,L-valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217987.1;locus_tag=AL60_RS23990;product=thiamine pyrophosphate-binding protein;protein_id=WP_003900704.1;transl_table=11 NZ_KK316860.1 RefSeq gene 50790 51179 . - . ID=gene-AL60_RS23995;Name=AL60_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS23995;old_locus_tag=AL60_03774 NZ_KK316860.1 Protein Homology CDS 50790 51179 . - 0 ID=cds-WP_003900069.1;Parent=gene-AL60_RS23995;Dbxref=GenBank:WP_003900069.1;Name=WP_003900069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900069.1;locus_tag=AL60_RS23995;product=cupin domain-containing protein;protein_id=WP_003900069.1;transl_table=11 NZ_KK316860.1 RefSeq gene 51344 51850 . + . ID=gene-AL60_RS24000;Name=AL60_RS24000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24000;old_locus_tag=AL60_03775 NZ_KK316860.1 Protein Homology CDS 51344 51850 . + 0 ID=cds-WP_003418774.1;Parent=gene-AL60_RS24000;Dbxref=GenBank:WP_003418774.1;Name=WP_003418774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217989.1;locus_tag=AL60_RS24000;product=nuclear transport factor 2 family protein;protein_id=WP_003418774.1;transl_table=11 NZ_KK316860.1 RefSeq gene 51930 52832 . - . ID=gene-AL60_RS24005;Name=AL60_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24005;old_locus_tag=AL60_03776 NZ_KK316860.1 Protein Homology CDS 51930 52832 . - 0 ID=cds-WP_003913481.1;Parent=gene-AL60_RS24005;Dbxref=GenBank:WP_003913481.1;Name=WP_003913481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913481.1;locus_tag=AL60_RS24005;product=alpha/beta fold hydrolase;protein_id=WP_003913481.1;transl_table=11 NZ_KK316860.1 RefSeq gene 52995 54344 . - . ID=gene-AL60_RS24010;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AL60_RS24010;old_locus_tag=AL60_03777 NZ_KK316860.1 Protein Homology CDS 52995 54344 . - 0 ID=cds-WP_003900863.1;Parent=gene-AL60_RS24010;Dbxref=GenBank:WP_003900863.1;Name=WP_003900863.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=kgtP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901651.1;locus_tag=AL60_RS24010;product=MFS transporter;protein_id=WP_003900863.1;transl_table=11 NZ_KK316860.1 RefSeq gene 54717 55013 . + . ID=gene-AL60_RS24015;Name=AL60_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24015;old_locus_tag=AL60_03778 NZ_KK316860.1 Protein Homology CDS 54717 55013 . + 0 ID=cds-WP_003418781.1;Parent=gene-AL60_RS24015;Dbxref=GenBank:WP_003418781.1;Name=WP_003418781.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177975.1;locus_tag=AL60_RS24015;product=PE family protein;protein_id=WP_003418781.1;transl_table=11 NZ_KK316860.1 RefSeq gene 55050 56231 . + . ID=gene-AL60_RS24020;Name=AL60_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24020;old_locus_tag=AL60_03779 NZ_KK316860.1 Protein Homology CDS 55050 56231 . + 0 ID=cds-WP_009938668.1;Parent=gene-AL60_RS24020;Dbxref=GenBank:WP_009938668.1;Name=WP_009938668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177976.1;locus_tag=AL60_RS24020;product=PPE family protein PPE60;protein_id=WP_009938668.1;transl_table=11 NZ_KK316860.1 RefSeq gene 56261 59509 . + . ID=gene-AL60_RS24025;Name=AL60_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24025;old_locus_tag=AL60_03780 NZ_KK316860.1 Protein Homology CDS 56261 59509 . + 0 ID=cds-WP_003913466.1;Parent=gene-AL60_RS24025;Dbxref=GenBank:WP_003913466.1;Name=WP_003913466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915396.1;locus_tag=AL60_RS24025;product=patatin-like protein;protein_id=WP_003913466.1;transl_table=11 NZ_KK316860.1 RefSeq gene 59533 61026 . - . ID=gene-AL60_RS24030;Name=AL60_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24030;old_locus_tag=AL60_03781 NZ_KK316860.1 Protein Homology CDS 59533 61026 . - 0 ID=cds-WP_003418921.1;Parent=gene-AL60_RS24030;Dbxref=GenBank:WP_003418921.1;Name=WP_003418921.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217997.1;locus_tag=AL60_RS24030;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003418921.1;transl_table=11 NZ_KK316860.1 RefSeq gene 61117 61806 . - . ID=gene-AL60_RS24035;Name=AL60_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24035;old_locus_tag=AL60_03782 NZ_KK316860.1 Protein Homology CDS 61117 61806 . - 0 ID=cds-WP_003418922.1;Parent=gene-AL60_RS24035;Dbxref=GenBank:WP_003418922.1;Name=WP_003418922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217998.1;locus_tag=AL60_RS24035;product=GAP family protein;protein_id=WP_003418922.1;transl_table=11 NZ_KK316860.1 RefSeq gene 61948 62730 . - . ID=gene-AL60_RS24040;Name=AL60_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24040;old_locus_tag=AL60_03783 NZ_KK316860.1 Protein Homology CDS 61948 62730 . - 0 ID=cds-WP_003418925.1;Parent=gene-AL60_RS24040;Dbxref=GenBank:WP_003418925.1;Name=WP_003418925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217999.1;locus_tag=AL60_RS24040;product=DUF2510 domain-containing protein;protein_id=WP_003418925.1;transl_table=11 NZ_KK316860.1 RefSeq gene 62774 63436 . - . ID=gene-AL60_RS24045;Name=AL60_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24045;old_locus_tag=AL60_03784 NZ_KK316860.1 Protein Homology CDS 62774 63436 . - 0 ID=cds-WP_003418931.1;Parent=gene-AL60_RS24045;Dbxref=GenBank:WP_003418931.1;Name=WP_003418931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218000.1;locus_tag=AL60_RS24045;product=LppP/LprE family lipoprotein;protein_id=WP_003418931.1;transl_table=11 NZ_KK316860.1 RefSeq gene 63702 65240 . + . ID=gene-AL60_RS24050;Name=cpsA;gbkey=Gene;gene=cpsA;gene_biotype=protein_coding;locus_tag=AL60_RS24050;old_locus_tag=AL60_03785 NZ_KK316860.1 Protein Homology CDS 63702 65240 . + 0 ID=cds-WP_003900866.1;Parent=gene-AL60_RS24050;Dbxref=GenBank:WP_003900866.1;Name=WP_003900866.1;Ontology_term=GO:0070726,GO:0071555,GO:0005886;gbkey=CDS;gene=cpsA;go_component=plasma membrane|0005886||IEA;go_process=cell wall assembly|0070726||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218001.1;locus_tag=AL60_RS24050;product=LCP family protein;protein_id=WP_003900866.1;transl_table=11 NZ_KK316860.1 RefSeq gene 65246 66076 . - . ID=gene-AL60_RS24055;Name=AL60_RS24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24055;old_locus_tag=AL60_03786 NZ_KK316860.1 Protein Homology CDS 65246 66076 . - 0 ID=cds-WP_003912250.1;Parent=gene-AL60_RS24055;Dbxref=GenBank:WP_003912250.1;Name=WP_003912250.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912250.1;locus_tag=AL60_RS24055;product=SDR family oxidoreductase;protein_id=WP_003912250.1;transl_table=11 NZ_KK316860.1 RefSeq gene 66396 66845 . + . ID=gene-AL60_RS24060;Name=AL60_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24060;old_locus_tag=AL60_03787 NZ_KK316860.1 Protein Homology CDS 66396 66845 . + 0 ID=cds-WP_003418942.1;Parent=gene-AL60_RS24060;Dbxref=GenBank:WP_003418942.1;Name=WP_003418942.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218003.1;locus_tag=AL60_RS24060;product=DoxX family protein;protein_id=WP_003418942.1;transl_table=11 NZ_KK316860.1 RefSeq gene 66798 67928 . - . ID=gene-AL60_RS24065;Name=lipF;gbkey=Gene;gene=lipF;gene_biotype=protein_coding;locus_tag=AL60_RS24065;old_locus_tag=AL60_03788 NZ_KK316860.1 Protein Homology CDS 66798 67928 . - 0 ID=cds-WP_003912251.1;Parent=gene-AL60_RS24065;Dbxref=GenBank:WP_003912251.1;Name=WP_003912251.1;gbkey=CDS;gene=lipF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912251.1;locus_tag=AL60_RS24065;product=carboxylesterase LipF;protein_id=WP_003912251.1;transl_table=11 NZ_KK316860.1 RefSeq gene 68291 68614 . + . ID=gene-AL60_RS24070;Name=AL60_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24070;old_locus_tag=AL60_03789 NZ_KK316860.1 Protein Homology CDS 68291 68614 . + 0 ID=cds-WP_003418948.1;Parent=gene-AL60_RS24070;Dbxref=GenBank:WP_003418948.1;Name=WP_003418948.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218005.1;locus_tag=AL60_RS24070;product=Rv3488 family transcriptional regulator;protein_id=WP_003418948.1;transl_table=11 NZ_KK316860.1 RefSeq gene 68696 68860 . + . ID=gene-AL60_RS24075;Name=AL60_RS24075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24075;old_locus_tag=AL60_03790 NZ_KK316860.1 Protein Homology CDS 68696 68860 . + 0 ID=cds-WP_003418950.1;Parent=gene-AL60_RS24075;Dbxref=GenBank:WP_003418950.1;Name=WP_003418950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218006.1;locus_tag=AL60_RS24075;product=hypothetical protein;protein_id=WP_003418950.1;transl_table=11 NZ_KK316860.1 RefSeq gene 68860 70362 . + . ID=gene-AL60_RS24080;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=AL60_RS24080;old_locus_tag=AL60_03791 NZ_KK316860.1 Protein Homology CDS 68860 70362 . + 0 ID=cds-WP_003900868.1;Parent=gene-AL60_RS24080;Dbxref=GenBank:WP_003900868.1;Name=WP_003900868.1;gbkey=CDS;gene=otsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218007.1;locus_tag=AL60_RS24080;product=trehalose-6-phosphate synthase;protein_id=WP_003900868.1;transl_table=11 NZ_KK316860.1 RefSeq gene 70514 71092 . + . ID=gene-AL60_RS24085;Name=AL60_RS24085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24085;old_locus_tag=AL60_03792 NZ_KK316860.1 Protein Homology CDS 70514 71092 . + 0 ID=cds-WP_003418954.1;Parent=gene-AL60_RS24085;Dbxref=GenBank:WP_003418954.1;Name=WP_003418954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218008.1;locus_tag=AL60_RS24085;product=hypothetical protein;protein_id=WP_003418954.1;transl_table=11 NZ_KK316860.1 RefSeq gene 71089 71571 . - . ID=gene-AL60_RS24090;Name=AL60_RS24090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24090;old_locus_tag=AL60_03793 NZ_KK316860.1 Protein Homology CDS 71089 71571 . - 0 ID=cds-WP_003418958.1;Parent=gene-AL60_RS24090;Dbxref=GenBank:WP_003418958.1;Name=WP_003418958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218009.1;locus_tag=AL60_RS24090;product=Mce associated protein;protein_id=WP_003418958.1;transl_table=11 NZ_KK316860.1 RefSeq gene 71571 72299 . - . ID=gene-AL60_RS24095;Name=AL60_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24095;old_locus_tag=AL60_03794 NZ_KK316860.1 Protein Homology CDS 71571 72299 . - 0 ID=cds-WP_003418960.1;Parent=gene-AL60_RS24095;Dbxref=GenBank:WP_003418960.1;Name=WP_003418960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218010.1;locus_tag=AL60_RS24095;product=mammalian cell entry protein;protein_id=WP_003418960.1;transl_table=11 NZ_KK316860.1 RefSeq gene 72299 73993 . - . ID=gene-AL60_RS24100;Name=AL60_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24100;old_locus_tag=AL60_03795 NZ_KK316860.1 Protein Homology CDS 72299 73993 . - 0 ID=cds-WP_003418963.1;Parent=gene-AL60_RS24100;Dbxref=GenBank:WP_003418963.1;Name=WP_003418963.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218011.1;locus_tag=AL60_RS24100;product=virulence factor Mce family protein;protein_id=WP_003418963.1;transl_table=11 NZ_KK316860.1 RefSeq gene 74004 75158 . - . ID=gene-AL60_RS24105;Name=lprN;gbkey=Gene;gene=lprN;gene_biotype=protein_coding;locus_tag=AL60_RS24105;old_locus_tag=AL60_03796 NZ_KK316860.1 Protein Homology CDS 74004 75158 . - 0 ID=cds-WP_003418964.1;Parent=gene-AL60_RS24105;Dbxref=GenBank:WP_003418964.1;Name=WP_003418964.1;gbkey=CDS;gene=lprN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218012.1;locus_tag=AL60_RS24105;product=Mce family lipoprotein LprN;protein_id=WP_003418964.1;transl_table=11 NZ_KK316860.1 RefSeq gene 75155 76510 . - . ID=gene-AL60_RS24110;Name=AL60_RS24110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24110;old_locus_tag=AL60_03797 NZ_KK316860.1 Protein Homology CDS 75155 76510 . - 0 ID=cds-WP_003418966.1;Parent=gene-AL60_RS24110;Dbxref=GenBank:WP_003418966.1;Name=WP_003418966.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218013.1;locus_tag=AL60_RS24110;product=virulence factor Mce family protein;protein_id=WP_003418966.1;transl_table=11 NZ_KK316860.1 RefSeq gene 76507 77580 . - . ID=gene-AL60_RS24115;Name=AL60_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24115;old_locus_tag=AL60_03798 NZ_KK316860.1 Protein Homology CDS 76507 77580 . - 0 ID=cds-WP_003418967.1;Parent=gene-AL60_RS24115;Dbxref=GenBank:WP_003418967.1;Name=WP_003418967.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218014.1;locus_tag=AL60_RS24115;product=virulence factor Mce family protein;protein_id=WP_003418967.1;transl_table=11 NZ_KK316860.1 RefSeq gene 77570 78622 . - . ID=gene-AL60_RS24120;Name=AL60_RS24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24120;old_locus_tag=AL60_03799 NZ_KK316860.1 Protein Homology CDS 77570 78622 . - 0 ID=cds-WP_003418972.1;Parent=gene-AL60_RS24120;Dbxref=GenBank:WP_003418972.1;Name=WP_003418972.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218015.1;locus_tag=AL60_RS24120;product=virulence factor Mce family protein;protein_id=WP_003418972.1;transl_table=11 NZ_KK316860.1 RefSeq gene 78622 79824 . - . ID=gene-AL60_RS24125;Name=mce4A;gbkey=Gene;gene=mce4A;gene_biotype=protein_coding;locus_tag=AL60_RS24125;old_locus_tag=AL60_03800 NZ_KK316860.1 Protein Homology CDS 78622 79824 . - 0 ID=cds-WP_003418979.1;Parent=gene-AL60_RS24125;Dbxref=GenBank:WP_003418979.1;Name=WP_003418979.1;gbkey=CDS;gene=mce4A;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177977.1;locus_tag=AL60_RS24125;product=virulence factor Mce4A;protein_id=WP_003418979.1;transl_table=11 NZ_KK316860.1 RefSeq gene 79844 80686 . - . ID=gene-AL60_RS24130;Name=AL60_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24130;old_locus_tag=AL60_03801 NZ_KK316860.1 Protein Homology CDS 79844 80686 . - 0 ID=cds-WP_003418983.1;Parent=gene-AL60_RS24130;Dbxref=GenBank:WP_003418983.1;Name=WP_003418983.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218017.1;locus_tag=AL60_RS24130;product=ABC transporter permease;protein_id=WP_003418983.1;transl_table=11 NZ_KK316860.1 RefSeq gene 80721 81485 . - . ID=gene-AL60_RS24135;Name=AL60_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24135;old_locus_tag=AL60_03802 NZ_KK316860.1 Protein Homology CDS 80721 81485 . - 0 ID=cds-WP_003418986.1;Parent=gene-AL60_RS24135;Dbxref=GenBank:WP_003418986.1;Name=WP_003418986.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218018.1;locus_tag=AL60_RS24135;product=MlaE family ABC transporter permease;protein_id=WP_003418986.1;transl_table=11 NZ_KK316860.1 RefSeq gene 81711 82664 . - . ID=gene-AL60_RS24140;Name=AL60_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24140;old_locus_tag=AL60_03803 NZ_KK316860.1 Protein Homology CDS 81711 82664 . - 0 ID=cds-WP_003418990.1;Parent=gene-AL60_RS24140;Dbxref=GenBank:WP_003418990.1;Name=WP_003418990.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218019.1;locus_tag=AL60_RS24140;product=3-oxoacyl-ACP reductase;protein_id=WP_003418990.1;transl_table=11 NZ_KK316860.1 RefSeq gene 82689 82880 . - . ID=gene-AL60_RS24145;Name=fdxD;gbkey=Gene;gene=fdxD;gene_biotype=protein_coding;locus_tag=AL60_RS24145;old_locus_tag=AL60_03804 NZ_KK316860.1 Protein Homology CDS 82689 82880 . - 0 ID=cds-WP_003418993.1;Parent=gene-AL60_RS24145;Dbxref=GenBank:WP_003418993.1;Name=WP_003418993.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;gene=fdxD;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218020.1;locus_tag=AL60_RS24145;product=ferredoxin;protein_id=WP_003418993.1;transl_table=11 NZ_KK316860.1 RefSeq gene 83095 84297 . + . ID=gene-AL60_RS24150;Name=AL60_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24150;old_locus_tag=AL60_03805 NZ_KK316860.1 Protein Homology CDS 83095 84297 . + 0 ID=cds-WP_003418997.1;Parent=gene-AL60_RS24150;Dbxref=GenBank:WP_003418997.1;Name=WP_003418997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218021.1;locus_tag=AL60_RS24150;product=acyl-CoA dehydrogenase;protein_id=WP_003418997.1;transl_table=11 NZ_KK316860.1 RefSeq gene 84322 85443 . + . ID=gene-AL60_RS24155;Name=AL60_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24155;old_locus_tag=AL60_03806 NZ_KK316860.1 Protein Homology CDS 84322 85443 . + 0 ID=cds-WP_003419000.1;Parent=gene-AL60_RS24155;Dbxref=GenBank:WP_003419000.1;Name=WP_003419000.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218022.1;locus_tag=AL60_RS24155;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003419000.1;transl_table=11 NZ_KK316860.1 RefSeq gene 85514 87022 . + . ID=gene-AL60_RS24160;Name=fadD17;gbkey=Gene;gene=fadD17;gene_biotype=protein_coding;locus_tag=AL60_RS24160;old_locus_tag=AL60_03807 NZ_KK316860.1 Protein Homology CDS 85514 87022 . + 0 ID=cds-WP_003901655.1;Parent=gene-AL60_RS24160;Dbxref=GenBank:WP_003901655.1;Name=WP_003901655.1;gbkey=CDS;gene=fadD17;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218023.1;locus_tag=AL60_RS24160;product=long-chain-fatty-acid--CoA ligase FadD17;protein_id=WP_003901655.1;transl_table=11 NZ_KK316860.1 RefSeq gene 87193 91404 . + . ID=gene-AL60_RS24165;Name=AL60_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24165;old_locus_tag=AL60_03808 NZ_KK316860.1 Protein Homology CDS 87193 91404 . + 0 ID=cds-WP_012054365.1;Parent=gene-AL60_RS24165;Dbxref=GenBank:WP_012054365.1;Name=WP_012054365.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177978.1;locus_tag=AL60_RS24165;product=PE family protein;protein_id=WP_012054365.1;transl_table=11 NZ_KK316860.1 RefSeq gene 91695 94883 . + . ID=gene-AL60_RS24170;Name=AL60_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24170;old_locus_tag=AL60_03809 NZ_KK316860.1 Protein Homology CDS 91695 94883 . + 0 ID=cds-WP_031721523.1;Parent=gene-AL60_RS24170;Dbxref=GenBank:WP_031721523.1;Name=WP_031721523.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177982.1;locus_tag=AL60_RS24170;product=PE family protein;protein_id=WP_031721523.1;transl_table=11 NZ_KK316860.1 RefSeq gene 95050 96597 . - . ID=gene-AL60_RS24175;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=AL60_RS24175;old_locus_tag=AL60_03810 NZ_KK316860.1 Protein Homology CDS 95050 96597 . - 0 ID=cds-WP_003900872.1;Parent=gene-AL60_RS24175;Dbxref=GenBank:WP_003900872.1;Name=WP_003900872.1;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;gene=ilvX;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218026.1;locus_tag=AL60_RS24175;product=acetolactate synthase large subunit;protein_id=WP_003900872.1;transl_table=11 NZ_KK316860.1 RefSeq gene 96594 97430 . - . ID=gene-AL60_RS24180;Name=AL60_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24180;old_locus_tag=AL60_03811 NZ_KK316860.1 Protein Homology CDS 96594 97430 . - 0 ID=cds-WP_003421145.1;Parent=gene-AL60_RS24180;Dbxref=GenBank:WP_003421145.1;Name=WP_003421145.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218027.1;locus_tag=AL60_RS24180;product=amidohydrolase family protein;protein_id=WP_003421145.1;transl_table=11 NZ_KK316860.1 RefSeq gene 97790 99840 . + . ID=gene-AL60_RS24185;Name=AL60_RS24185;end_range=99840,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24185;old_locus_tag=AL60_03812;partial=true NZ_KK316860.1 Protein Homology CDS 97790 99840 . + 0 ID=cds-WP_031673707.1;Parent=gene-AL60_RS24185;Dbxref=GenBank:WP_031673707.1;Name=WP_031673707.1;Ontology_term=GO:0005576,GO:0009986;end_range=99840,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177980.1;locus_tag=AL60_RS24185;partial=true;product=PE family protein;protein_id=WP_031673707.1;transl_table=11 ##sequence-region NZ_KK316861.1 1 87138 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316861.1 RefSeq region 1 87138 . + . ID=NZ_KK316861.1:1..87138;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316861.1 RefSeq gene 1 679 . - . ID=gene-AL60_RS0105465;Name=AL60_RS0105465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105465;partial=true;start_range=.,1 NZ_KK316861.1 Protein Homology CDS 1 679 . - 0 ID=cds-WP_141772051.1;Parent=gene-AL60_RS0105465;Dbxref=GenBank:WP_141772051.1;Name=WP_141772051.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177780.1;locus_tag=AL60_RS0105465;partial=true;product=PE family protein;protein_id=WP_141772051.1;start_range=.,1;transl_table=11 NZ_KK316861.1 RefSeq gene 1012 2403 . - . ID=gene-AL60_RS24190;Name=AL60_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24190;old_locus_tag=AL60_03813 NZ_KK316861.1 Protein Homology CDS 1012 2403 . - 0 ID=cds-WP_010886106.1;Parent=gene-AL60_RS24190;Dbxref=GenBank:WP_010886106.1;Name=WP_010886106.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177781.1;locus_tag=AL60_RS24190;product=PE family protein;protein_id=WP_010886106.1;transl_table=11 NZ_KK316861.1 RefSeq gene 2765 4528 . - . ID=gene-AL60_RS24195;Name=AL60_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24195;old_locus_tag=AL60_03814 NZ_KK316861.1 Protein Homology CDS 2765 4528 . - 0 ID=cds-WP_003405708.1;Parent=gene-AL60_RS24195;Dbxref=GenBank:WP_003405708.1;Name=WP_003405708.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215585.1;locus_tag=AL60_RS24195;product=alpha/beta hydrolase;protein_id=WP_003405708.1;transl_table=11 NZ_KK316861.1 RefSeq gene 4525 5298 . - . ID=gene-AL60_RS24200;Name=AL60_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24200;old_locus_tag=AL60_03815 NZ_KK316861.1 Protein Homology CDS 4525 5298 . - 0 ID=cds-WP_003405712.1;Parent=gene-AL60_RS24200;Dbxref=GenBank:WP_003405712.1;Name=WP_003405712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215586.1;locus_tag=AL60_RS24200;product=enoyl-CoA hydratase;protein_id=WP_003405712.1;transl_table=11 NZ_KK316861.1 RefSeq gene 5310 6347 . - . ID=gene-AL60_RS24205;Name=AL60_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24205;old_locus_tag=AL60_03816 NZ_KK316861.1 Protein Homology CDS 5310 6347 . - 0 ID=cds-WP_003405716.1;Parent=gene-AL60_RS24205;Dbxref=GenBank:WP_003405716.1;Name=WP_003405716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215587.1;locus_tag=AL60_RS24205;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_003405716.1;transl_table=11 NZ_KK316861.1 RefSeq gene 6534 7370 . + . ID=gene-AL60_RS24210;Name=AL60_RS24210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24210;old_locus_tag=AL60_03817 NZ_KK316861.1 Protein Homology CDS 6534 7370 . + 0 ID=cds-WP_003405719.1;Parent=gene-AL60_RS24210;Dbxref=GenBank:WP_003405719.1;Name=WP_003405719.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215588.1;locus_tag=AL60_RS24210;product=Bax inhibitor-1/YccA family protein;protein_id=WP_003405719.1;transl_table=11 NZ_KK316861.1 RefSeq gene 7486 8337 . + . ID=gene-AL60_RS24215;Name=AL60_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24215;old_locus_tag=AL60_03818 NZ_KK316861.1 Protein Homology CDS 7486 8337 . + 0 ID=cds-WP_003405722.1;Parent=gene-AL60_RS24215;Dbxref=GenBank:WP_003405722.1;Name=WP_003405722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215589.1;locus_tag=AL60_RS24215;product=hypothetical protein;protein_id=WP_003405722.1;transl_table=11 NZ_KK316861.1 RefSeq gene 8411 9628 . - . ID=gene-AL60_RS24220;Name=AL60_RS24220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24220;old_locus_tag=AL60_03819 NZ_KK316861.1 Protein Homology CDS 8411 9628 . - 0 ID=cds-WP_003405724.1;Parent=gene-AL60_RS24220;Dbxref=GenBank:WP_003405724.1;Name=WP_003405724.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215590.1;locus_tag=AL60_RS24220;product=acetyl-CoA C-acetyltransferase;protein_id=WP_003405724.1;transl_table=11 NZ_KK316861.1 RefSeq gene 9681 10625 . - . ID=gene-AL60_RS24225;Name=AL60_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24225;old_locus_tag=AL60_03820 NZ_KK316861.1 Protein Homology CDS 9681 10625 . - 0 ID=cds-WP_003906506.1;Parent=gene-AL60_RS24225;Dbxref=GenBank:WP_003906506.1;Name=WP_003906506.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215591.1;locus_tag=AL60_RS24225;product=SGNH/GDSL hydrolase family protein;protein_id=WP_003906506.1;transl_table=11 NZ_KK316861.1 RefSeq gene 10848 11915 . + . ID=gene-AL60_RS24230;Name=lipU;gbkey=Gene;gene=lipU;gene_biotype=protein_coding;locus_tag=AL60_RS24230;old_locus_tag=AL60_03821 NZ_KK316861.1 Protein Homology CDS 10848 11915 . + 0 ID=cds-WP_003405728.1;Parent=gene-AL60_RS24230;Dbxref=GenBank:WP_003405728.1;Name=WP_003405728.1;gbkey=CDS;gene=lipU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918181.1;locus_tag=AL60_RS24230;product=lipase LipU;protein_id=WP_003405728.1;transl_table=11 NZ_KK316861.1 RefSeq gene 11972 13366 . + . ID=gene-AL60_RS24235;Name=cbs;gbkey=Gene;gene=cbs;gene_biotype=protein_coding;locus_tag=AL60_RS24235;old_locus_tag=AL60_03822 NZ_KK316861.1 Protein Homology CDS 11972 13366 . + 0 ID=cds-WP_003405730.1;Parent=gene-AL60_RS24235;Dbxref=GenBank:WP_003405730.1;Name=WP_003405730.1;Ontology_term=GO:0019343,GO:0004122,GO:0005737;gbkey=CDS;gene=cbs;go_component=cytoplasm|0005737||IEA;go_function=cystathionine beta-synthase activity|0004122||IEA;go_process=cysteine biosynthetic process via cystathionine|0019343||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177782.1;locus_tag=AL60_RS24235;product=cystathionine beta-synthase;protein_id=WP_003405730.1;transl_table=11 NZ_KK316861.1 RefSeq gene 13568 14290 . + . ID=gene-AL60_RS24240;Name=pra;gbkey=Gene;gene=pra;gene_biotype=protein_coding;locus_tag=AL60_RS24240;old_locus_tag=AL60_03823 NZ_KK316861.1 Protein Homology CDS 13568 14290 . + 0 ID=cds-WP_003901991.1;Parent=gene-AL60_RS24240;Dbxref=GenBank:WP_003901991.1;Name=WP_003901991.1;Ontology_term=GO:0005886;gbkey=CDS;gene=pra;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215594.1;locus_tag=AL60_RS24240;product=RDD family protein;protein_id=WP_003901991.1;transl_table=11 NZ_KK316861.1 RefSeq gene 14322 15488 . + . ID=gene-AL60_RS24245;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=AL60_RS24245;old_locus_tag=AL60_03824 NZ_KK316861.1 Protein Homology CDS 14322 15488 . + 0 ID=cds-WP_003405736.1;Parent=gene-AL60_RS24245;Dbxref=GenBank:WP_003405736.1;Name=WP_003405736.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;gene=metB;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215595.1;locus_tag=AL60_RS24245;product=cystathionine gamma-synthase;protein_id=WP_003405736.1;transl_table=11 NZ_KK316861.1 RefSeq gene 15559 16053 . - . ID=gene-AL60_RS24250;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AL60_RS24250;old_locus_tag=AL60_03825 NZ_KK316861.1 Protein Homology CDS 15559 16053 . - 0 ID=cds-WP_003405742.1;Parent=gene-AL60_RS24250;Dbxref=GenBank:WP_003405742.1;Name=WP_003405742.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908869.1;locus_tag=AL60_RS24250;product=transcription elongation factor GreA;protein_id=WP_003405742.1;transl_table=11 NZ_KK316861.1 RefSeq gene 16239 16673 . - . ID=gene-AL60_RS24255;Name=AL60_RS24255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24255;old_locus_tag=AL60_03826 NZ_KK316861.1 Protein Homology CDS 16239 16673 . - 0 ID=cds-WP_003405744.1;Parent=gene-AL60_RS24255;Dbxref=GenBank:WP_003405744.1;Name=WP_003405744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215597.1;locus_tag=AL60_RS24255;product=DUF4307 domain-containing protein;protein_id=WP_003405744.1;transl_table=11 NZ_KK316861.1 RefSeq gene 16775 17641 . + . ID=gene-AL60_RS24260;Name=mca;gbkey=Gene;gene=mca;gene_biotype=protein_coding;locus_tag=AL60_RS24260;old_locus_tag=AL60_03827 NZ_KK316861.1 Protein Homology CDS 16775 17641 . + 0 ID=cds-WP_003405746.1;Parent=gene-AL60_RS24260;Dbxref=GenBank:WP_003405746.1;Name=WP_003405746.1;Ontology_term=GO:0010126;gbkey=CDS;gene=mca;go_process=mycothiol metabolic process|0010126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215598.1;locus_tag=AL60_RS24260;product=mycothiol conjugate amidase Mca;protein_id=WP_003405746.1;transl_table=11 NZ_KK316861.1 RefSeq gene 17638 17904 . + . ID=gene-AL60_RS24265;Name=AL60_RS24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24265;old_locus_tag=AL60_03828 NZ_KK316861.1 Protein Homology CDS 17638 17904 . + 0 ID=cds-WP_003405749.1;Parent=gene-AL60_RS24265;Dbxref=GenBank:WP_003405749.1;Name=WP_003405749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215599.1;locus_tag=AL60_RS24265;product=hypothetical protein;protein_id=WP_003405749.1;transl_table=11 NZ_KK316861.1 RefSeq gene 17891 19912 . + . ID=gene-AL60_RS24270;Name=AL60_RS24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24270;old_locus_tag=AL60_03829 NZ_KK316861.1 Protein Homology CDS 17891 19912 . + 0 ID=cds-WP_003405750.1;Parent=gene-AL60_RS24270;Dbxref=GenBank:WP_003405750.1;Name=WP_003405750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215600.1;locus_tag=AL60_RS24270;product=thioredoxin domain-containing protein;protein_id=WP_003405750.1;transl_table=11 NZ_KK316861.1 RefSeq gene 20011 20739 . - . ID=gene-AL60_RS24275;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=AL60_RS24275;old_locus_tag=AL60_03830 NZ_KK316861.1 Protein Homology CDS 20011 20739 . - 0 ID=cds-WP_003901993.1;Parent=gene-AL60_RS24275;Dbxref=GenBank:WP_003901993.1;Name=WP_003901993.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215601.1;locus_tag=AL60_RS24275;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_003901993.1;transl_table=11 NZ_KK316861.1 RefSeq gene 20850 21638 . + . ID=gene-AL60_RS24280;Name=AL60_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24280;old_locus_tag=AL60_03831 NZ_KK316861.1 Protein Homology CDS 20850 21638 . + 0 ID=cds-WP_003906511.1;Parent=gene-AL60_RS24280;Dbxref=GenBank:WP_003906511.1;Name=WP_003906511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215602.1;locus_tag=AL60_RS24280;product=(2Z%2C6E)-farnesyl diphosphate synthase;protein_id=WP_003906511.1;transl_table=11 NZ_KK316861.1 RefSeq gene 21815 24163 . + . ID=gene-AL60_RS24285;Name=AL60_RS24285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24285;old_locus_tag=AL60_03832 NZ_KK316861.1 Protein Homology CDS 21815 24163 . + 0 ID=cds-WP_031648044.1;Parent=gene-AL60_RS24285;Dbxref=GenBank:WP_031648044.1;Name=WP_031648044.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177783.1;locus_tag=AL60_RS24285;product=PE family protein;protein_id=WP_031648044.1;transl_table=11 NZ_KK316861.1 RefSeq pseudogene 24370 24660 . + . ID=gene-AL60_RS28200;Name=AL60_RS28200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28200;old_locus_tag=AL60_03833;partial=true;pseudo=true;start_range=.,24370 NZ_KK316861.1 Protein Homology CDS 24370 24660 . + 0 ID=cds-AL60_RS28200;Parent=gene-AL60_RS28200;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878551.1;locus_tag=AL60_RS28200;partial=true;product=undecaprenyl diphosphate synthase family protein;pseudo=true;start_range=.,24370;transl_table=11 NZ_KK316861.1 RefSeq gene 24813 25247 . + . ID=gene-AL60_RS28205;Name=AL60_RS28205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28205;old_locus_tag=AL60_03834 NZ_KK316861.1 Protein Homology CDS 24813 25247 . + 0 ID=cds-WP_003900271.1;Parent=gene-AL60_RS28205;Dbxref=GenBank:WP_003900271.1;Name=WP_003900271.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585063.1;locus_tag=AL60_RS28205;product=PE family protein;protein_id=WP_003900271.1;transl_table=11 NZ_KK316861.1 RefSeq gene 25264 25431 . + . ID=gene-AL60_RS27740;Name=AL60_RS27740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27740 NZ_KK316861.1 Protein Homology CDS 25264 25431 . + 0 ID=cds-WP_003917409.1;Parent=gene-AL60_RS27740;Dbxref=GenBank:WP_003917409.1;Name=WP_003917409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351503.1;locus_tag=AL60_RS27740;product=PE family protein;protein_id=WP_003917409.1;transl_table=11 NZ_KK316861.1 RefSeq gene 25397 25513 . + . ID=gene-AL60_RS28030;Name=AL60_RS28030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28030 NZ_KK316861.1 Protein Homology CDS 25397 25513 . + 0 ID=cds-WP_349839371.1;Parent=gene-AL60_RS28030;Dbxref=GenBank:WP_349839371.1;Name=WP_349839371.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012762.6;locus_tag=AL60_RS28030;product=hypothetical protein;protein_id=WP_349839371.1;transl_table=11 NZ_KK316861.1 RefSeq gene 25525 25707 . + . ID=gene-AL60_RS0105480;Name=AL60_RS0105480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105480 NZ_KK316861.1 Protein Homology CDS 25525 25707 . + 0 ID=cds-WP_003898724.1;Parent=gene-AL60_RS0105480;Dbxref=GenBank:WP_003898724.1;Name=WP_003898724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030029.1;locus_tag=AL60_RS0105480;product=hypothetical protein;protein_id=WP_003898724.1;transl_table=11 NZ_KK316861.1 RefSeq gene 25817 25921 . + . ID=gene-AL60_RS27745;Name=AL60_RS27745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27745;old_locus_tag=AL60_03836 NZ_KK316861.1 Protein Homology CDS 25817 25921 . + 0 ID=cds-WP_003405770.1;Parent=gene-AL60_RS27745;Dbxref=GenBank:WP_003405770.1;Name=WP_003405770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405770.1;locus_tag=AL60_RS27745;product=endo-1%2C4-beta-glucanase;protein_id=WP_003405770.1;transl_table=11 NZ_KK316861.1 RefSeq gene 25899 26354 . + . ID=gene-AL60_RS24305;Name=AL60_RS24305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24305;old_locus_tag=AL60_03837 NZ_KK316861.1 Protein Homology CDS 25899 26354 . + 0 ID=cds-WP_003900273.1;Parent=gene-AL60_RS24305;Dbxref=GenBank:WP_003900273.1;Name=WP_003900273.1;Ontology_term=GO:0000272,GO:0008810;gbkey=CDS;go_function=cellulase activity|0008810||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627137.1;locus_tag=AL60_RS24305;product=GH12 family glycosyl hydrolase domain-containing protein;protein_id=WP_003900273.1;transl_table=11 NZ_KK316861.1 RefSeq gene 26769 29330 . + . ID=gene-AL60_RS24310;Name=AL60_RS24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24310;old_locus_tag=AL60_03838 NZ_KK316861.1 Protein Homology CDS 26769 29330 . + 0 ID=cds-WP_012054258.1;Parent=gene-AL60_RS24310;Dbxref=GenBank:WP_012054258.1;Name=WP_012054258.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177786.1;locus_tag=AL60_RS24310;product=PE family protein;protein_id=WP_012054258.1;transl_table=11 NZ_KK316861.1 RefSeq gene 29548 30486 . - . ID=gene-AL60_RS24315;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AL60_RS24315;old_locus_tag=AL60_03839 NZ_KK316861.1 Protein Homology CDS 29548 30486 . - 0 ID=cds-WP_003405790.1;Parent=gene-AL60_RS24315;Dbxref=GenBank:WP_003405790.1;Name=WP_003405790.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875370.1;locus_tag=AL60_RS24315;product=type I pantothenate kinase;protein_id=WP_003405790.1;transl_table=11 NZ_KK316861.1 RefSeq gene 30874 32154 . + . ID=gene-AL60_RS24320;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AL60_RS24320;old_locus_tag=AL60_03840 NZ_KK316861.1 Protein Homology CDS 30874 32154 . + 0 ID=cds-WP_003405797.1;Parent=gene-AL60_RS24320;Dbxref=GenBank:WP_003405797.1;Name=WP_003405797.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177787.3;locus_tag=AL60_RS24320;product=serine hydroxymethyltransferase;protein_id=WP_003405797.1;transl_table=11 NZ_KK316861.1 RefSeq gene 32259 33086 . + . ID=gene-AL60_RS24325;Name=AL60_RS24325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24325;old_locus_tag=AL60_03841 NZ_KK316861.1 Protein Homology CDS 32259 33086 . + 0 ID=cds-WP_003405801.1;Parent=gene-AL60_RS24325;Dbxref=GenBank:WP_003405801.1;Name=WP_003405801.1;Ontology_term=GO:0006631,GO:0045300;gbkey=CDS;go_function=stearoyl-[ACP] desaturase activity|0045300||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215610.1;locus_tag=AL60_RS24325;product=acyl-ACP desaturase;protein_id=WP_003405801.1;transl_table=11 NZ_KK316861.1 RefSeq gene 33297 34598 . + . ID=gene-AL60_RS24330;Name=AL60_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24330;old_locus_tag=AL60_03842 NZ_KK316861.1 Protein Homology CDS 33297 34598 . + 0 ID=cds-WP_003405802.1;Parent=gene-AL60_RS24330;Dbxref=GenBank:WP_003405802.1;Name=WP_003405802.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215611.1;locus_tag=AL60_RS24330;product=PhoH family protein;protein_id=WP_003405802.1;transl_table=11 NZ_KK316861.1 RefSeq gene 34685 35560 . + . ID=gene-AL60_RS24335;Name=AL60_RS24335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24335;old_locus_tag=AL60_03843 NZ_KK316861.1 Protein Homology CDS 34685 35560 . + 0 ID=cds-WP_003898725.1;Parent=gene-AL60_RS24335;Dbxref=GenBank:WP_003898725.1;Name=WP_003898725.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215612.1;locus_tag=AL60_RS24335;product=polysaccharide deacetylase family protein;protein_id=WP_003898725.1;transl_table=11 NZ_KK316861.1 RefSeq gene 35563 36444 . - . ID=gene-AL60_RS24340;Name=AL60_RS24340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24340;old_locus_tag=AL60_03844 NZ_KK316861.1 Protein Homology CDS 35563 36444 . - 0 ID=cds-WP_003405804.1;Parent=gene-AL60_RS24340;Dbxref=GenBank:WP_003405804.1;Name=WP_003405804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215613.1;locus_tag=AL60_RS24340;product=hypothetical protein;protein_id=WP_003405804.1;transl_table=11 NZ_KK316861.1 RefSeq gene 36441 37865 . - . ID=gene-AL60_RS24345;Name=fum;gbkey=Gene;gene=fum;gene_biotype=protein_coding;locus_tag=AL60_RS24345;old_locus_tag=AL60_03845 NZ_KK316861.1 Protein Homology CDS 36441 37865 . - 0 ID=cds-WP_003405805.1;Parent=gene-AL60_RS24345;Dbxref=GenBank:WP_003405805.1;Name=WP_003405805.1;Ontology_term=GO:0006099,GO:0006106,GO:0006108,GO:0004333;gbkey=CDS;gene=fum;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,fumarate metabolic process|0006106||IEA,malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215614.1;locus_tag=AL60_RS24345;product=class II fumarate hydratase;protein_id=WP_003405805.1;transl_table=11 NZ_KK316861.1 RefSeq gene 37896 38984 . - . ID=gene-AL60_RS24350;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AL60_RS24350;old_locus_tag=AL60_03846 NZ_KK316861.1 Protein Homology CDS 37896 38984 . - 0 ID=cds-WP_003898726.1;Parent=gene-AL60_RS24350;Dbxref=GenBank:WP_003898726.1;Name=WP_003898726.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215615.3;locus_tag=AL60_RS24350;product=class II fructose-bisphosphatase;protein_id=WP_003898726.1;transl_table=11 NZ_KK316861.1 RefSeq gene 39040 39684 . + . ID=gene-AL60_RS24355;Name=AL60_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24355;old_locus_tag=AL60_03847 NZ_KK316861.1 Protein Homology CDS 39040 39684 . + 0 ID=cds-WP_003915494.1;Parent=gene-AL60_RS24355;Dbxref=GenBank:WP_003915494.1;Name=WP_003915494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915494.1;locus_tag=AL60_RS24355;product=DUF4245 domain-containing protein;protein_id=WP_003915494.1;transl_table=11 NZ_KK316861.1 RefSeq gene 39691 40848 . - . ID=gene-AL60_RS24360;Name=AL60_RS24360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24360;old_locus_tag=AL60_03848 NZ_KK316861.1 Protein Homology CDS 39691 40848 . - 0 ID=cds-WP_003898727.1;Parent=gene-AL60_RS24360;Dbxref=GenBank:WP_003898727.1;Name=WP_003898727.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215617.1;locus_tag=AL60_RS24360;product=AI-2E family transporter;protein_id=WP_003898727.1;transl_table=11 NZ_KK316861.1 RefSeq gene 40960 41271 . - . ID=gene-AL60_RS24365;Name=mazF3;gbkey=Gene;gene=mazF3;gene_biotype=protein_coding;gene_synonym=mazF-mt6;locus_tag=AL60_RS24365;old_locus_tag=AL60_03849 NZ_KK316861.1 Protein Homology CDS 40960 41271 . - 0 ID=cds-WP_003898728.1;Parent=gene-AL60_RS24365;Dbxref=GenBank:WP_003898728.1;Name=WP_003898728.1;gbkey=CDS;gene=mazF3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215618.1;locus_tag=AL60_RS24365;product=type II toxin-antitoxin system toxin endoribonuclease MazF3;protein_id=WP_003898728.1;transl_table=11 NZ_KK316861.1 RefSeq gene 41271 41591 . - . ID=gene-AL60_RS24370;Name=mazE3;gbkey=Gene;gene=mazE3;gene_biotype=protein_coding;locus_tag=AL60_RS24370;old_locus_tag=AL60_03850 NZ_KK316861.1 Protein Homology CDS 41271 41591 . - 0 ID=cds-WP_003405836.1;Parent=gene-AL60_RS24370;Dbxref=GenBank:WP_003405836.1;Name=WP_003405836.1;gbkey=CDS;gene=mazE3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405836.1;locus_tag=AL60_RS24370;product=type II toxin-antitoxin system antitoxin MazE3;protein_id=WP_003405836.1;transl_table=11 NZ_KK316861.1 RefSeq pseudogene 41601 43137 . + . ID=gene-AL60_RS26575;Name=AL60_RS26575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26575;pseudo=true NZ_KK316861.1 Protein Homology CDS 41601 43137 . + 0 ID=cds-AL60_RS26575;Parent=gene-AL60_RS26575;Note=frameshifted;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011724013.1;locus_tag=AL60_RS26575;product=carboxylesterase/lipase family protein;pseudo=true;transl_table=11 NZ_KK316861.1 RefSeq gene 43144 44256 . - . ID=gene-AL60_RS24385;Name=AL60_RS24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24385;old_locus_tag=AL60_03853 NZ_KK316861.1 Protein Homology CDS 43144 44256 . - 0 ID=cds-WP_003405840.1;Parent=gene-AL60_RS24385;Dbxref=GenBank:WP_003405840.1;Name=WP_003405840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215622.1;locus_tag=AL60_RS24385;product=3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase;protein_id=WP_003405840.1;transl_table=11 NZ_KK316861.1 RefSeq gene 44266 44523 . - . ID=gene-AL60_RS24390;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=AL60_RS24390;old_locus_tag=AL60_03854 NZ_KK316861.1 Protein Homology CDS 44266 44523 . - 0 ID=cds-WP_003405844.1;Parent=gene-AL60_RS24390;Dbxref=GenBank:WP_003405844.1;Name=WP_003405844.1;Ontology_term=GO:0006308,GO:0008855;gbkey=CDS;gene=xseB;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215623.1;locus_tag=AL60_RS24390;product=exodeoxyribonuclease VII small subunit;protein_id=WP_003405844.1;transl_table=11 NZ_KK316861.1 RefSeq gene 44513 45760 . - . ID=gene-AL60_RS24395;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AL60_RS24395;old_locus_tag=AL60_03855 NZ_KK316861.1 Protein Homology CDS 44513 45760 . - 0 ID=cds-WP_003405846.1;Parent=gene-AL60_RS24395;Dbxref=GenBank:WP_003405846.1;Name=WP_003405846.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215624.1;locus_tag=AL60_RS24395;product=exodeoxyribonuclease VII large subunit;protein_id=WP_003405846.1;transl_table=11 NZ_KK316861.1 RefSeq gene 45757 46395 . - . ID=gene-AL60_RS24400;Name=AL60_RS24400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24400;old_locus_tag=AL60_03856 NZ_KK316861.1 Protein Homology CDS 45757 46395 . - 0 ID=cds-WP_003898730.1;Parent=gene-AL60_RS24400;Dbxref=GenBank:WP_003898730.1;Name=WP_003898730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215625.1;locus_tag=AL60_RS24400;product=lipid droplet-associated protein;protein_id=WP_003898730.1;transl_table=11 NZ_KK316861.1 RefSeq gene 46485 47492 . + . ID=gene-AL60_RS24405;Name=AL60_RS24405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24405;old_locus_tag=AL60_03857 NZ_KK316861.1 Protein Homology CDS 46485 47492 . + 0 ID=cds-WP_003405853.1;Parent=gene-AL60_RS24405;Dbxref=GenBank:WP_003405853.1;Name=WP_003405853.1;Ontology_term=GO:0019288,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177788.1;locus_tag=AL60_RS24405;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_003405853.1;transl_table=11 NZ_KK316861.1 RefSeq gene 47509 48492 . - . ID=gene-AL60_RS24410;Name=AL60_RS24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24410;old_locus_tag=AL60_03858 NZ_KK316861.1 Protein Homology CDS 47509 48492 . - 0 ID=cds-WP_003898731.1;Parent=gene-AL60_RS24410;Dbxref=GenBank:WP_003898731.1;Name=WP_003898731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215627.2;locus_tag=AL60_RS24410;product=DUF6542 domain-containing protein;protein_id=WP_003898731.1;transl_table=11 NZ_KK316861.1 RefSeq gene 48555 49628 . + . ID=gene-AL60_RS24415;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AL60_RS24415;old_locus_tag=AL60_03859 NZ_KK316861.1 Protein Homology CDS 48555 49628 . + 0 ID=cds-WP_003898732.1;Parent=gene-AL60_RS24415;Dbxref=GenBank:WP_003898732.1;Name=WP_003898732.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215628.1;locus_tag=AL60_RS24415;product=redox-regulated ATPase YchF;protein_id=WP_003898732.1;transl_table=11 NZ_KK316861.1 RefSeq gene 49716 49913 . + . ID=gene-AL60_RS24420;Name=AL60_RS24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24420;old_locus_tag=AL60_03860 NZ_KK316861.1 Protein Homology CDS 49716 49913 . + 0 ID=cds-WP_003405863.1;Parent=gene-AL60_RS24420;Dbxref=GenBank:WP_003405863.1;Name=WP_003405863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215629.1;locus_tag=AL60_RS24420;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003405863.1;transl_table=11 NZ_KK316861.1 RefSeq gene 49910 50284 . + . ID=gene-AL60_RS24425;Name=AL60_RS24425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24425;old_locus_tag=AL60_03861 NZ_KK316861.1 Protein Homology CDS 49910 50284 . + 0 ID=cds-WP_003405865.1;Parent=gene-AL60_RS24425;Dbxref=GenBank:WP_003405865.1;Name=WP_003405865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215630.1;locus_tag=AL60_RS24425;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003405865.1;transl_table=11 NZ_KK316861.1 RefSeq gene 50487 51185 . + . ID=gene-AL60_RS24430;Name=AL60_RS24430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24430;old_locus_tag=AL60_03862 NZ_KK316861.1 Protein Homology CDS 50487 51185 . + 0 ID=cds-WP_003898733.1;Parent=gene-AL60_RS24430;Dbxref=GenBank:WP_003898733.1;Name=WP_003898733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215631.1;locus_tag=AL60_RS24430;product=hypothetical protein;protein_id=WP_003898733.1;transl_table=11 NZ_KK316861.1 RefSeq gene 51303 51488 . + . ID=gene-AL60_RS24435;Name=AL60_RS24435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24435;old_locus_tag=AL60_03863 NZ_KK316861.1 Protein Homology CDS 51303 51488 . + 0 ID=cds-WP_003901093.1;Parent=gene-AL60_RS24435;Dbxref=GenBank:WP_003901093.1;Name=WP_003901093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215632.1;locus_tag=AL60_RS24435;product=hypothetical protein;protein_id=WP_003901093.1;transl_table=11 NZ_KK316861.1 RefSeq gene 51415 51690 . - . ID=gene-AL60_RS24440;Name=AL60_RS24440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24440;old_locus_tag=AL60_03864 NZ_KK316861.1 Protein Homology CDS 51415 51690 . - 0 ID=cds-WP_003405867.1;Parent=gene-AL60_RS24440;Dbxref=GenBank:WP_003405867.1;Name=WP_003405867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627157.1;locus_tag=AL60_RS24440;product=hypothetical protein;protein_id=WP_003405867.1;transl_table=11 NZ_KK316861.1 RefSeq gene 51933 52256 . + . ID=gene-AL60_RS24445;Name=AL60_RS24445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24445;old_locus_tag=AL60_03865 NZ_KK316861.1 Protein Homology CDS 51933 52256 . + 0 ID=cds-WP_003405871.1;Parent=gene-AL60_RS24445;Dbxref=GenBank:WP_003405871.1;Name=WP_003405871.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215633.1;locus_tag=AL60_RS24445;product=putative quinol monooxygenase;protein_id=WP_003405871.1;transl_table=11 NZ_KK316861.1 RefSeq gene 52271 52981 . - . ID=gene-AL60_RS24450;Name=AL60_RS24450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24450;old_locus_tag=AL60_03866 NZ_KK316861.1 Protein Homology CDS 52271 52981 . - 0 ID=cds-WP_003911399.1;Parent=gene-AL60_RS24450;Dbxref=GenBank:WP_003911399.1;Name=WP_003911399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013828012.1;locus_tag=AL60_RS24450;product=hypothetical protein;protein_id=WP_003911399.1;transl_table=11 NZ_KK316861.1 RefSeq gene 53003 53212 . + . ID=gene-AL60_RS27280;Name=AL60_RS27280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27280 NZ_KK316861.1 Protein Homology CDS 53003 53212 . + 0 ID=cds-WP_003911400.1;Parent=gene-AL60_RS27280;Dbxref=GenBank:WP_003911400.1;Name=WP_003911400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016706054.1;locus_tag=AL60_RS27280;product=hypothetical protein;protein_id=WP_003911400.1;transl_table=11 NZ_KK316861.1 RefSeq pseudogene 53164 53934 . - . ID=gene-AL60_RS24460;Name=AL60_RS24460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS24460;old_locus_tag=AL60_03868;pseudo=true NZ_KK316861.1 Protein Homology CDS 53164 53934 . - 0 ID=cds-AL60_RS24460;Parent=gene-AL60_RS24460;Note=frameshifted;Ontology_term=GO:0009190,GO:0035556,GO:0009975,GO:0016849,GO:0032555,GO:0046872;gbkey=CDS;go_function=cyclase activity|0009975||IEA,phosphorus-oxygen lyase activity|0016849||IEA,purine ribonucleotide binding|0032555||IEA,metal ion binding|0046872||IEA;go_process=cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020729832.1;locus_tag=AL60_RS24460;product=adenylate/guanylate cyclase domain-containing protein;pseudo=true;transl_table=11 NZ_KK316861.1 RefSeq gene 54007 55407 . + . ID=gene-AL60_RS24465;Name=AL60_RS24465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24465;old_locus_tag=AL60_03869 NZ_KK316861.1 Protein Homology CDS 54007 55407 . + 0 ID=cds-WP_003898735.1;Parent=gene-AL60_RS24465;Dbxref=GenBank:WP_003898735.1;Name=WP_003898735.1;Ontology_term=GO:0006006,GO:0004345;gbkey=CDS;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177789.1;locus_tag=AL60_RS24465;product=glucose-6-phosphate dehydrogenase;protein_id=WP_003898735.1;transl_table=11 NZ_KK316861.1 RefSeq gene 55429 56451 . + . ID=gene-AL60_RS24470;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=AL60_RS24470;old_locus_tag=AL60_03870 NZ_KK316861.1 Protein Homology CDS 55429 56451 . + 0 ID=cds-WP_003405880.1;Parent=gene-AL60_RS24470;Dbxref=GenBank:WP_003405880.1;Name=WP_003405880.1;Ontology_term=GO:0006098,GO:0016616;gbkey=CDS;gene=gnd;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215638.1;locus_tag=AL60_RS24470;product=phosphogluconate dehydrogenase (NAD(+)-dependent%2C decarboxylating);protein_id=WP_003405880.1;transl_table=11 NZ_KK316861.1 RefSeq gene 56444 57310 . - . ID=gene-AL60_RS24475;Name=bpoB;gbkey=Gene;gene=bpoB;gene_biotype=protein_coding;locus_tag=AL60_RS24475;old_locus_tag=AL60_03871 NZ_KK316861.1 Protein Homology CDS 56444 57310 . - 0 ID=cds-WP_003898736.1;Parent=gene-AL60_RS24475;Dbxref=GenBank:WP_003898736.1;Name=WP_003898736.1;gbkey=CDS;gene=bpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898736.1;locus_tag=AL60_RS24475;product=alpha/beta fold hydrolase;protein_id=WP_003898736.1;transl_table=11 NZ_KK316861.1 RefSeq gene 57472 58377 . + . ID=gene-AL60_RS24480;Name=ephC;gbkey=Gene;gene=ephC;gene_biotype=protein_coding;locus_tag=AL60_RS24480;old_locus_tag=AL60_03872 NZ_KK316861.1 Protein Homology CDS 57472 58377 . + 0 ID=cds-WP_003911402.1;Parent=gene-AL60_RS24480;Dbxref=GenBank:WP_003911402.1;Name=WP_003911402.1;gbkey=CDS;gene=ephC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911402.1;locus_tag=AL60_RS24480;product=alpha/beta fold hydrolase;protein_id=WP_003911402.1;transl_table=11 NZ_KK316861.1 RefSeq gene 58382 59626 . + . ID=gene-AL60_RS24485;Name=AL60_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24485;old_locus_tag=AL60_03873 NZ_KK316861.1 Protein Homology CDS 58382 59626 . + 0 ID=cds-WP_003900276.1;Parent=gene-AL60_RS24485;Dbxref=GenBank:WP_003900276.1;Name=WP_003900276.1;Ontology_term=GO:0004144;gbkey=CDS;go_function=diacylglycerol O-acyltransferase activity|0004144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215641.1;locus_tag=AL60_RS24485;product=WS/DGAT domain-containing protein;protein_id=WP_003900276.1;transl_table=11 NZ_KK316861.1 RefSeq gene 59630 60235 . - . ID=gene-AL60_RS24490;Name=AL60_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24490;old_locus_tag=AL60_03874 NZ_KK316861.1 Protein Homology CDS 59630 60235 . - 0 ID=cds-WP_003405892.1;Parent=gene-AL60_RS24490;Dbxref=GenBank:WP_003405892.1;Name=WP_003405892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215642.1;locus_tag=AL60_RS24490;product=hypothetical protein;protein_id=WP_003405892.1;transl_table=11 NZ_KK316861.1 RefSeq gene 60232 61704 . - . ID=gene-AL60_RS24495;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=AL60_RS24495;old_locus_tag=AL60_03875 NZ_KK316861.1 Protein Homology CDS 60232 61704 . - 0 ID=cds-WP_003906520.1;Parent=gene-AL60_RS24495;Dbxref=GenBank:WP_003906520.1;Name=WP_003906520.1;gbkey=CDS;gene=ppdK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215643.1;locus_tag=AL60_RS24495;product=pyruvate%2C phosphate dikinase;protein_id=WP_003906520.1;transl_table=11 NZ_KK316861.1 RefSeq gene 61917 63272 . - . ID=gene-AL60_RS24500;Name=AL60_RS24500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24500;old_locus_tag=AL60_03876 NZ_KK316861.1 Protein Homology CDS 61917 63272 . - 0 ID=cds-WP_003906521.1;Parent=gene-AL60_RS24500;Dbxref=GenBank:WP_003906521.1;Name=WP_003906521.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292706.1;locus_tag=AL60_RS24500;product=HNH endonuclease signature motif containing protein;protein_id=WP_003906521.1;transl_table=11 NZ_KK316861.1 RefSeq gene 63374 64834 . - . ID=gene-AL60_RS24505;Name=AL60_RS24505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24505;old_locus_tag=AL60_03877 NZ_KK316861.1 Protein Homology CDS 63374 64834 . - 0 ID=cds-WP_003405904.1;Parent=gene-AL60_RS24505;Dbxref=GenBank:WP_003405904.1;Name=WP_003405904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215645.1;locus_tag=AL60_RS24505;product=short-chain fatty acyl-CoA regulator family protein;protein_id=WP_003405904.1;transl_table=11 NZ_KK316861.1 RefSeq gene 64930 66435 . + . ID=gene-AL60_RS24510;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=AL60_RS24510;old_locus_tag=AL60_03878 NZ_KK316861.1 Protein Homology CDS 64930 66435 . + 0 ID=cds-WP_003405907.1;Parent=gene-AL60_RS24510;Dbxref=GenBank:WP_003405907.1;Name=WP_003405907.1;Ontology_term=GO:0047547;gbkey=CDS;gene=prpD;go_function=2-methylcitrate dehydratase activity|0047547||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288002.1;locus_tag=AL60_RS24510;product=2-methylcitrate dehydratase PrpD;protein_id=WP_003405907.1;transl_table=11 NZ_KK316861.1 RefSeq gene 66432 67613 . + . ID=gene-AL60_RS24515;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=AL60_RS24515;old_locus_tag=AL60_03879 NZ_KK316861.1 Protein Homology CDS 66432 67613 . + 0 ID=cds-WP_003405909.1;Parent=gene-AL60_RS24515;Dbxref=GenBank:WP_003405909.1;Name=WP_003405909.1;Ontology_term=GO:0006099,GO:0036440,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate synthase activity|0036440||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215647.1;locus_tag=AL60_RS24515;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_003405909.1;transl_table=11 NZ_KK316861.1 RefSeq gene 67625 69355 . + . ID=gene-AL60_RS24520;Name=AL60_RS24520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24520;old_locus_tag=AL60_03880 NZ_KK316861.1 Protein Homology CDS 67625 69355 . + 0 ID=cds-WP_003405912.1;Parent=gene-AL60_RS24520;Dbxref=GenBank:WP_003405912.1;Name=WP_003405912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215648.1;locus_tag=AL60_RS24520;product=DUF3556 domain-containing protein;protein_id=WP_003405912.1;transl_table=11 NZ_KK316861.1 RefSeq gene 69367 71646 . - . ID=gene-AL60_RS24525;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=AL60_RS24525;old_locus_tag=AL60_03881 NZ_KK316861.1 Protein Homology CDS 69367 71646 . - 0 ID=cds-WP_003405914.1;Parent=gene-AL60_RS24525;Dbxref=GenBank:WP_003405914.1;Name=WP_003405914.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215649.1;locus_tag=AL60_RS24525;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_003405914.1;transl_table=11 NZ_KK316861.1 cmsearch riboswitch 71780 72015 . - . ID=id-NZ_KK316861.1:71780..72015;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316861.1 RefSeq gene 72222 72458 . + . ID=gene-AL60_RS24530;Name=AL60_RS24530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24530;old_locus_tag=AL60_03882 NZ_KK316861.1 Protein Homology CDS 72222 72458 . + 0 ID=cds-WP_003405917.1;Parent=gene-AL60_RS24530;Dbxref=GenBank:WP_003405917.1;Name=WP_003405917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215650.1;locus_tag=AL60_RS24530;product=hypothetical protein;protein_id=WP_003405917.1;transl_table=11 NZ_KK316861.1 RefSeq gene 72572 74428 . - . ID=gene-AL60_RS28035;Name=AL60_RS28035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28035;old_locus_tag=AL60_03883 NZ_KK316861.1 Protein Homology CDS 72572 74428 . - 0 ID=cds-WP_003405919.1;Parent=gene-AL60_RS28035;Dbxref=GenBank:WP_003405919.1;Name=WP_003405919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177790.1;locus_tag=AL60_RS28035;product=PPE family protein;protein_id=WP_003405919.1;transl_table=11 NZ_KK316861.1 RefSeq pseudogene 74692 74856 . + . ID=gene-AL60_RS24540;Name=AL60_RS24540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS24540;old_locus_tag=AL60_03884;partial=true;pseudo=true;start_range=.,74692 NZ_KK316861.1 Protein Homology CDS 74692 74856 . + 0 ID=cds-AL60_RS24540;Parent=gene-AL60_RS24540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003920476.1;locus_tag=AL60_RS24540;partial=true;product=acetyl-CoA acetyltransferase;pseudo=true;start_range=.,74692;transl_table=11 NZ_KK316861.1 RefSeq pseudogene 74906 75573 . + . ID=gene-AL60_RS27285;Name=AL60_RS27285;end_range=75573,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27285;partial=true;pseudo=true NZ_KK316861.1 Protein Homology CDS 74906 75573 . + 0 ID=cds-AL60_RS27285;Parent=gene-AL60_RS27285;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003824;end_range=75573,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005147140.1;locus_tag=AL60_RS27285;partial=true;product=enoyl-CoA hydratase-related protein;pseudo=true;transl_table=11 NZ_KK316861.1 RefSeq gene 75769 76785 . - . ID=gene-AL60_RS24550;Name=AL60_RS24550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24550;old_locus_tag=AL60_03887 NZ_KK316861.1 Protein Homology CDS 75769 76785 . - 0 ID=cds-WP_003405932.1;Parent=gene-AL60_RS24550;Dbxref=GenBank:WP_003405932.1;Name=WP_003405932.1;Ontology_term=GO:0000166,GO:0016491,GO:0071949;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215654.1;locus_tag=AL60_RS24550;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003405932.1;transl_table=11 NZ_KK316861.1 RefSeq gene 76782 77282 . - . ID=gene-AL60_RS24555;Name=AL60_RS24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24555;old_locus_tag=AL60_03888 NZ_KK316861.1 Protein Homology CDS 76782 77282 . - 0 ID=cds-WP_003405935.1;Parent=gene-AL60_RS24555;Dbxref=GenBank:WP_003405935.1;Name=WP_003405935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215655.1;locus_tag=AL60_RS24555;product=isoprenylcysteine carboxyl methyltransferase family protein;protein_id=WP_003405935.1;transl_table=11 NZ_KK316861.1 RefSeq gene 77770 78492 . + . ID=gene-AL60_RS24560;Name=AL60_RS24560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24560;old_locus_tag=AL60_03889 NZ_KK316861.1 Protein Homology CDS 77770 78492 . + 0 ID=cds-WP_003911379.1;Parent=gene-AL60_RS24560;Dbxref=GenBank:WP_003911379.1;Name=WP_003911379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011724051.1;locus_tag=AL60_RS24560;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_003911379.1;transl_table=11 NZ_KK316861.1 RefSeq gene 78500 79306 . - . ID=gene-AL60_RS24565;Name=AL60_RS24565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24565;old_locus_tag=AL60_03890 NZ_KK316861.1 Protein Homology CDS 78500 79306 . - 0 ID=cds-WP_003405951.1;Parent=gene-AL60_RS24565;Dbxref=GenBank:WP_003405951.1;Name=WP_003405951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215657.1;locus_tag=AL60_RS24565;product=enoyl-CoA hydratase;protein_id=WP_003405951.1;transl_table=11 NZ_KK316861.1 RefSeq gene 79449 80255 . - . ID=gene-AL60_RS24570;Name=AL60_RS24570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24570;old_locus_tag=AL60_03891 NZ_KK316861.1 Protein Homology CDS 79449 80255 . - 0 ID=cds-WP_003405957.1;Parent=gene-AL60_RS24570;Dbxref=GenBank:WP_003405957.1;Name=WP_003405957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215658.1;locus_tag=AL60_RS24570;product=enoyl-CoA hydratase;protein_id=WP_003405957.1;transl_table=11 NZ_KK316861.1 RefSeq gene 80359 81441 . + . ID=gene-AL60_RS24575;Name=mcr;gbkey=Gene;gene=mcr;gene_biotype=protein_coding;locus_tag=AL60_RS24575;old_locus_tag=AL60_03892 NZ_KK316861.1 Protein Homology CDS 80359 81441 . + 0 ID=cds-WP_003898740.1;Parent=gene-AL60_RS24575;Dbxref=GenBank:WP_003898740.1;Name=WP_003898740.1;gbkey=CDS;gene=mcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215659.1;locus_tag=AL60_RS24575;product=alpha-methylacyl-CoA racemase;protein_id=WP_003898740.1;transl_table=11 NZ_KK316861.1 RefSeq gene 81453 82205 . + . ID=gene-AL60_RS24580;Name=AL60_RS24580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24580;old_locus_tag=AL60_03893 NZ_KK316861.1 Protein Homology CDS 81453 82205 . + 0 ID=cds-WP_003405961.1;Parent=gene-AL60_RS24580;Dbxref=GenBank:WP_003405961.1;Name=WP_003405961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215660.1;locus_tag=AL60_RS24580;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_003405961.1;transl_table=11 NZ_KK316861.1 RefSeq gene 82333 82464 . - . ID=gene-AL60_RS27845;Name=AL60_RS27845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27845;old_locus_tag=AL60_03894 NZ_KK316861.1 Protein Homology CDS 82333 82464 . - 0 ID=cds-WP_003405966.1;Parent=gene-AL60_RS27845;Dbxref=GenBank:WP_003405966.1;Name=WP_003405966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405966.1;locus_tag=AL60_RS27845;product=hypothetical protein;protein_id=WP_003405966.1;transl_table=11 NZ_KK316861.1 RefSeq pseudogene 82720 85064 . + . ID=gene-AL60_RS27290;Name=AL60_RS27290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27290;pseudo=true NZ_KK316861.1 Protein Homology CDS 82720 85064 . + 0 ID=cds-AL60_RS27290;Parent=gene-AL60_RS27290;Note=frameshifted;Ontology_term=GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015629850.1;locus_tag=AL60_RS27290;product=MMPL family transporter;pseudo=true;transl_table=11 NZ_KK316861.1 RefSeq gene 85197 85847 . + . ID=gene-AL60_RS24585;Name=AL60_RS24585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24585;old_locus_tag=AL60_03897 NZ_KK316861.1 Protein Homology CDS 85197 85847 . + 0 ID=cds-WP_003405982.1;Parent=gene-AL60_RS24585;Dbxref=GenBank:WP_003405982.1;Name=WP_003405982.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215663.1;locus_tag=AL60_RS24585;product=class I SAM-dependent methyltransferase;protein_id=WP_003405982.1;transl_table=11 NZ_KK316861.1 RefSeq pseudogene 86222 86323 . + . ID=gene-AL60_RS27765;Name=AL60_RS27765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27765;partial=true;pseudo=true;start_range=.,86222 NZ_KK316861.1 Protein Homology CDS 86222 86323 . + 0 ID=cds-AL60_RS27765;Parent=gene-AL60_RS27765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216464.1;locus_tag=AL60_RS27765;partial=true;product=hypothetical protein;pseudo=true;start_range=.,86222;transl_table=11 NZ_KK316861.1 RefSeq gene 86325 86600 . - . ID=gene-AL60_RS27770;Name=AL60_RS27770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27770 NZ_KK316861.1 Protein Homology CDS 86325 86600 . - 0 ID=cds-WP_003405990.1;Parent=gene-AL60_RS27770;Dbxref=GenBank:WP_003405990.1;Name=WP_003405990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405990.1;locus_tag=AL60_RS27770;product=hypothetical protein;protein_id=WP_003405990.1;transl_table=11 NZ_KK316861.1 RefSeq gene 86597 87138 . - . ID=gene-AL60_RS0105515;Name=AL60_RS0105515;end_range=87138,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105515;partial=true NZ_KK316861.1 Protein Homology CDS 86597 87138 . - 2 ID=cds-WP_031721526.1;Parent=gene-AL60_RS0105515;Dbxref=GenBank:WP_031721526.1;Name=WP_031721526.1;end_range=87138,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216461.1;locus_tag=AL60_RS0105515;partial=true;product=HNH endonuclease signature motif containing protein;protein_id=WP_031721526.1;transl_table=11 ##sequence-region NZ_KK316862.1 1 62805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316862.1 RefSeq region 1 62805 . + . ID=NZ_KK316862.1:1..62805;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316862.1 RefSeq pseudogene 24 951 . + . ID=gene-AL60_RS26605;Name=AL60_RS26605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26605;old_locus_tag=AL60_03898;pseudo=true NZ_KK316862.1 Protein Homology CDS 24 951 . + 0 ID=cds-AL60_RS26605;Parent=gene-AL60_RS26605;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612358.1;locus_tag=AL60_RS26605;product=IS5-like element ISMt1 family transposase;pseudo=true;transl_table=11 NZ_KK316862.1 RefSeq gene 1035 1748 . - . ID=gene-AL60_RS24590;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=AL60_RS24590;old_locus_tag=AL60_03899 NZ_KK316862.1 Protein Homology CDS 1035 1748 . - 0 ID=cds-WP_003406044.1;Parent=gene-AL60_RS24590;Dbxref=GenBank:WP_003406044.1;Name=WP_003406044.1;gbkey=CDS;gene=cobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215667.1;locus_tag=AL60_RS24590;product=NAD-dependent protein deacylase;protein_id=WP_003406044.1;transl_table=11 NZ_KK316862.1 RefSeq gene 1786 2151 . + . ID=gene-AL60_RS24595;Name=AL60_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24595;old_locus_tag=AL60_03900 NZ_KK316862.1 Protein Homology CDS 1786 2151 . + 0 ID=cds-WP_003406047.1;Parent=gene-AL60_RS24595;Dbxref=GenBank:WP_003406047.1;Name=WP_003406047.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215668.1;locus_tag=AL60_RS24595;product=Rv1152 family transcriptional regulator;protein_id=WP_003406047.1;transl_table=11 NZ_KK316862.1 RefSeq gene 2129 2977 . - . ID=gene-AL60_RS24600;Name=omt;gbkey=Gene;gene=omt;gene_biotype=protein_coding;locus_tag=AL60_RS24600;old_locus_tag=AL60_03901 NZ_KK316862.1 Protein Homology CDS 2129 2977 . - 0 ID=cds-WP_003898744.1;Parent=gene-AL60_RS24600;Dbxref=GenBank:WP_003898744.1;Name=WP_003898744.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;gene=omt;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215669.1;locus_tag=AL60_RS24600;product=class I SAM-dependent methyltransferase;protein_id=WP_003898744.1;transl_table=11 NZ_KK316862.1 RefSeq gene 2974 3504 . - . ID=gene-AL60_RS24605;Name=AL60_RS24605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24605;old_locus_tag=AL60_03902 NZ_KK316862.1 Protein Homology CDS 2974 3504 . - 0 ID=cds-WP_023637376.1;Parent=gene-AL60_RS24605;Dbxref=GenBank:WP_023637376.1;Name=WP_023637376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012395864.1;locus_tag=AL60_RS24605;product=DUF1697 domain-containing protein;protein_id=WP_023637376.1;transl_table=11 NZ_KK316862.1 RefSeq gene 3560 4003 . + . ID=gene-AL60_RS24610;Name=AL60_RS24610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24610;old_locus_tag=AL60_03903 NZ_KK316862.1 Protein Homology CDS 3560 4003 . + 0 ID=cds-WP_003898745.1;Parent=gene-AL60_RS24610;Dbxref=GenBank:WP_003898745.1;Name=WP_003898745.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215671.1;locus_tag=AL60_RS24610;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003898745.1;transl_table=11 NZ_KK316862.1 RefSeq gene 4161 4349 . + . ID=gene-AL60_RS0105530;Name=AL60_RS0105530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105530 NZ_KK316862.1 Protein Homology CDS 4161 4349 . + 0 ID=cds-WP_003406063.1;Parent=gene-AL60_RS0105530;Dbxref=GenBank:WP_003406063.1;Name=WP_003406063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030031.1;locus_tag=AL60_RS0105530;product=DUF5302 domain-containing protein;protein_id=WP_003406063.1;transl_table=11 NZ_KK316862.1 RefSeq gene 4437 5024 . + . ID=gene-AL60_RS24615;Name=AL60_RS24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24615;old_locus_tag=AL60_03904 NZ_KK316862.1 Protein Homology CDS 4437 5024 . + 0 ID=cds-WP_003406064.1;Parent=gene-AL60_RS24615;Dbxref=GenBank:WP_003406064.1;Name=WP_003406064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215672.1;locus_tag=AL60_RS24615;product=HhH-GPD-type base excision DNA repair protein;protein_id=WP_003406064.1;transl_table=11 NZ_KK316862.1 RefSeq gene 5021 5167 . + . ID=gene-AL60_RS26610;Name=AL60_RS26610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26610 NZ_KK316862.1 Protein Homology CDS 5021 5167 . + 0 ID=cds-WP_003406065.1;Parent=gene-AL60_RS26610;Dbxref=GenBank:WP_003406065.1;Name=WP_003406065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007169078.1;locus_tag=AL60_RS26610;product=hypothetical protein;protein_id=WP_003406065.1;transl_table=11 NZ_KK316862.1 RefSeq gene 5187 6302 . - . ID=gene-AL60_RS24620;Name=AL60_RS24620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24620;old_locus_tag=AL60_03905 NZ_KK316862.1 Protein Homology CDS 5187 6302 . - 0 ID=cds-WP_003406066.1;Parent=gene-AL60_RS24620;Dbxref=GenBank:WP_003406066.1;Name=WP_003406066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215673.1;locus_tag=AL60_RS24620;product=Rv1157c family protein;protein_id=WP_003406066.1;transl_table=11 NZ_KK316862.1 RefSeq gene 6310 6993 . - . ID=gene-AL60_RS24625;Name=AL60_RS24625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24625;old_locus_tag=AL60_03906 NZ_KK316862.1 Protein Homology CDS 6310 6993 . - 0 ID=cds-WP_003406075.1;Parent=gene-AL60_RS24625;Dbxref=GenBank:WP_003406075.1;Name=WP_003406075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215674.1;locus_tag=AL60_RS24625;product=hypothetical protein;protein_id=WP_003406075.1;transl_table=11 NZ_KK316862.1 RefSeq gene 7123 8418 . + . ID=gene-AL60_RS24630;Name=pimE;gbkey=Gene;gene=pimE;gene_biotype=protein_coding;locus_tag=AL60_RS24630;old_locus_tag=AL60_03907 NZ_KK316862.1 Protein Homology CDS 7123 8418 . + 0 ID=cds-WP_003900282.1;Parent=gene-AL60_RS24630;Dbxref=GenBank:WP_003900282.1;Name=WP_003900282.1;gbkey=CDS;gene=pimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215675.1;locus_tag=AL60_RS24630;product=mannosyltransferase;protein_id=WP_003900282.1;transl_table=11 NZ_KK316862.1 RefSeq gene 8415 8699 . - . ID=gene-AL60_RS24635;Name=AL60_RS24635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24635;old_locus_tag=AL60_03908 NZ_KK316862.1 Protein Homology CDS 8415 8699 . - 0 ID=cds-WP_003406082.1;Parent=gene-AL60_RS24635;Dbxref=GenBank:WP_003406082.1;Name=WP_003406082.1;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177641.1;locus_tag=AL60_RS24635;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_003406082.1;transl_table=11 NZ_KK316862.1 RefSeq gene 8726 9151 . + . ID=gene-AL60_RS24640;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=AL60_RS24640;old_locus_tag=AL60_03909 NZ_KK316862.1 Protein Homology CDS 8726 9151 . + 0 ID=cds-WP_003406084.1;Parent=gene-AL60_RS24640;Dbxref=GenBank:WP_003406084.1;Name=WP_003406084.1;gbkey=CDS;gene=mutT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215676.1;locus_tag=AL60_RS24640;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_003406084.1;transl_table=11 NZ_KK316862.1 RefSeq gene 9459 13157 . + . ID=gene-AL60_RS24645;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;locus_tag=AL60_RS24645;old_locus_tag=AL60_03910 NZ_KK316862.1 Protein Homology CDS 9459 13157 . + 0 ID=cds-WP_012054262.1;Parent=gene-AL60_RS24645;Dbxref=GenBank:WP_012054262.1;Name=WP_012054262.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narG;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215677.1;locus_tag=AL60_RS24645;product=nitrate reductase subunit alpha;protein_id=WP_012054262.1;transl_table=11 NZ_KK316862.1 RefSeq gene 13196 14872 . + . ID=gene-AL60_RS24650;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AL60_RS24650;old_locus_tag=AL60_03911 NZ_KK316862.1 Protein Homology CDS 13196 14872 . + 0 ID=cds-WP_003406090.1;Parent=gene-AL60_RS24650;Dbxref=GenBank:WP_003406090.1;Name=WP_003406090.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898749.1;locus_tag=AL60_RS24650;product=nitrate reductase subunit beta;protein_id=WP_003406090.1;transl_table=11 NZ_KK316862.1 RefSeq gene 14869 15534 . + . ID=gene-AL60_RS24655;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=AL60_RS24655;old_locus_tag=AL60_03912 NZ_KK316862.1 Protein Homology CDS 14869 15534 . + 0 ID=cds-WP_003911426.1;Parent=gene-AL60_RS24655;Dbxref=GenBank:WP_003911426.1;Name=WP_003911426.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911426.1;locus_tag=AL60_RS24655;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_003911426.1;transl_table=11 NZ_KK316862.1 RefSeq gene 15537 16277 . + . ID=gene-AL60_RS24660;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AL60_RS24660;old_locus_tag=AL60_03913 NZ_KK316862.1 Protein Homology CDS 15537 16277 . + 0 ID=cds-WP_003406095.1;Parent=gene-AL60_RS24660;Dbxref=GenBank:WP_003406095.1;Name=WP_003406095.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215680.1;locus_tag=AL60_RS24660;product=respiratory nitrate reductase subunit gamma;protein_id=WP_003406095.1;transl_table=11 NZ_KK316862.1 RefSeq gene 16299 18185 . + . ID=gene-AL60_RS24665;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=AL60_RS24665;old_locus_tag=AL60_03914 NZ_KK316862.1 Protein Homology CDS 16299 18185 . + 0 ID=cds-WP_003406099.1;Parent=gene-AL60_RS24665;Dbxref=GenBank:WP_003406099.1;Name=WP_003406099.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215681.1;locus_tag=AL60_RS24665;product=translational GTPase TypA;protein_id=WP_003406099.1;transl_table=11 NZ_KK316862.1 RefSeq gene 18283 20190 . + . ID=gene-AL60_RS24670;Name=lpqW;gbkey=Gene;gene=lpqW;gene_biotype=protein_coding;locus_tag=AL60_RS24670;old_locus_tag=AL60_03915 NZ_KK316862.1 Protein Homology CDS 18283 20190 . + 0 ID=cds-WP_003406102.1;Parent=gene-AL60_RS24670;Dbxref=GenBank:WP_003406102.1;Name=WP_003406102.1;gbkey=CDS;gene=lpqW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215682.1;locus_tag=AL60_RS24670;product=lipoarabinomannan biosynthesis protein LpqW;protein_id=WP_003406102.1;transl_table=11 NZ_KK316862.1 RefSeq gene 20218 20823 . - . ID=gene-AL60_RS24675;Name=AL60_RS24675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24675;old_locus_tag=AL60_03916 NZ_KK316862.1 Protein Homology CDS 20218 20823 . - 0 ID=cds-WP_003406104.1;Parent=gene-AL60_RS24675;Dbxref=GenBank:WP_003406104.1;Name=WP_003406104.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215683.1;locus_tag=AL60_RS24675;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003406104.1;transl_table=11 NZ_KK316862.1 RefSeq gene 20895 21935 . - . ID=gene-AL60_RS24680;Name=AL60_RS24680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24680;old_locus_tag=AL60_03917 NZ_KK316862.1 Protein Homology CDS 20895 21935 . - 0 ID=cds-WP_003898751.1;Parent=gene-AL60_RS24680;Dbxref=GenBank:WP_003898751.1;Name=WP_003898751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177791.1;locus_tag=AL60_RS24680;product=PPE family protein;protein_id=WP_003898751.1;transl_table=11 NZ_KK316862.1 RefSeq gene 21953 22255 . - . ID=gene-AL60_RS24685;Name=lipX;gbkey=Gene;gene=lipX;gene_biotype=protein_coding;gene_synonym=PE11;locus_tag=AL60_RS24685;old_locus_tag=AL60_03918 NZ_KK316862.1 Protein Homology CDS 21953 22255 . - 0 ID=cds-WP_003898752.1;Parent=gene-AL60_RS24685;Dbxref=GenBank:WP_003898752.1;Name=WP_003898752.1;gbkey=CDS;gene=lipX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177792.1;locus_tag=AL60_RS24685;product=lipase/esterase LipX;protein_id=WP_003898752.1;transl_table=11 NZ_KK316862.1 RefSeq gene 22435 23346 . + . ID=gene-AL60_RS24690;Name=mshB;gbkey=Gene;gene=mshB;gene_biotype=protein_coding;locus_tag=AL60_RS24690;old_locus_tag=AL60_03919 NZ_KK316862.1 Protein Homology CDS 22435 23346 . + 0 ID=cds-WP_003406154.1;Parent=gene-AL60_RS24690;Dbxref=GenBank:WP_003406154.1;Name=WP_003406154.1;Ontology_term=GO:0010125,GO:0035595;gbkey=CDS;gene=mshB;go_function=N-acetylglucosaminylinositol deacetylase activity|0035595||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215686.1;locus_tag=AL60_RS24690;product=N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase;protein_id=WP_003406154.1;transl_table=11 NZ_KK316862.1 RefSeq gene 23438 23878 . + . ID=gene-AL60_RS24695;Name=AL60_RS24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24695;old_locus_tag=AL60_03920 NZ_KK316862.1 Protein Homology CDS 23438 23878 . + 0 ID=cds-WP_003406163.1;Parent=gene-AL60_RS24695;Dbxref=GenBank:WP_003406163.1;Name=WP_003406163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215687.2;locus_tag=AL60_RS24695;product=hypothetical protein;protein_id=WP_003406163.1;transl_table=11 NZ_KK316862.1 RefSeq gene 23886 24812 . - . ID=gene-AL60_RS24700;Name=AL60_RS24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24700;old_locus_tag=AL60_03921 NZ_KK316862.1 Protein Homology CDS 23886 24812 . - 0 ID=cds-WP_003898753.1;Parent=gene-AL60_RS24700;Dbxref=GenBank:WP_003898753.1;Name=WP_003898753.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177793.1;locus_tag=AL60_RS24700;product=PE family protein;protein_id=WP_003898753.1;transl_table=11 NZ_KK316862.1 RefSeq gene 25062 27632 . + . ID=gene-AL60_RS24705;Name=fbiC;gbkey=Gene;gene=fbiC;gene_biotype=protein_coding;locus_tag=AL60_RS24705;old_locus_tag=AL60_03922 NZ_KK316862.1 Protein Homology CDS 25062 27632 . + 0 ID=cds-WP_003406167.1;Parent=gene-AL60_RS24705;Dbxref=GenBank:WP_003406167.1;Name=WP_003406167.1;Ontology_term=GO:0016765,GO:0051539;gbkey=CDS;gene=fbiC;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215689.1;locus_tag=AL60_RS24705;product=bifunctional FO biosynthesis protein CofGH;protein_id=WP_003406167.1;transl_table=11 NZ_KK316862.1 RefSeq gene 27800 28132 . - . ID=gene-AL60_RS24710;Name=AL60_RS24710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24710;old_locus_tag=AL60_03923 NZ_KK316862.1 Protein Homology CDS 27800 28132 . - 0 ID=cds-WP_003406169.1;Parent=gene-AL60_RS24710;Dbxref=GenBank:WP_003406169.1;Name=WP_003406169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215690.1;locus_tag=AL60_RS24710;product=hemophore-related protein;protein_id=WP_003406169.1;transl_table=11 NZ_KK316862.1 RefSeq gene 28333 30357 . - . ID=gene-AL60_RS24715;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=AL60_RS24715;old_locus_tag=AL60_03924 NZ_KK316862.1 Protein Homology CDS 28333 30357 . - 0 ID=cds-WP_003898755.1;Parent=gene-AL60_RS24715;Dbxref=GenBank:WP_003898755.1;Name=WP_003898755.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fadH;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215691.1;locus_tag=AL60_RS24715;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_003898755.1;transl_table=11 NZ_KK316862.1 RefSeq gene 30354 30923 . - . ID=gene-AL60_RS24720;Name=AL60_RS24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24720;old_locus_tag=AL60_03925 NZ_KK316862.1 Protein Homology CDS 30354 30923 . - 0 ID=cds-WP_003406182.1;Parent=gene-AL60_RS24720;Dbxref=GenBank:WP_003406182.1;Name=WP_003406182.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215692.1;locus_tag=AL60_RS24720;product=PadR family transcriptional regulator;protein_id=WP_003406182.1;transl_table=11 NZ_KK316862.1 RefSeq gene 31136 31462 . + . ID=gene-AL60_RS24725;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=AL60_RS24725;old_locus_tag=AL60_03926 NZ_KK316862.1 Protein Homology CDS 31136 31462 . + 0 ID=cds-WP_003406185.1;Parent=gene-AL60_RS24725;Dbxref=GenBank:WP_003406185.1;Name=WP_003406185.1;Ontology_term=GO:0009055,GO:0046872;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215693.1;locus_tag=AL60_RS24725;product=ferredoxin;protein_id=WP_003406185.1;transl_table=11 NZ_KK316862.1 RefSeq gene 31495 32583 . + . ID=gene-AL60_RS24730;Name=dapC;gbkey=Gene;gene=dapC;gene_biotype=protein_coding;locus_tag=AL60_RS24730;old_locus_tag=AL60_03927 NZ_KK316862.1 Protein Homology CDS 31495 32583 . + 0 ID=cds-WP_003898756.1;Parent=gene-AL60_RS24730;Dbxref=GenBank:WP_003898756.1;Name=WP_003898756.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=dapC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215694.1;locus_tag=AL60_RS24730;product=succinyldiaminopimelate transaminase;protein_id=WP_003898756.1;transl_table=11 NZ_KK316862.1 RefSeq gene 32611 35430 . - . ID=gene-AL60_RS24735;Name=AL60_RS24735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24735;old_locus_tag=AL60_03928 NZ_KK316862.1 Protein Homology CDS 32611 35430 . - 0 ID=cds-WP_003406189.1;Parent=gene-AL60_RS24735;Dbxref=GenBank:WP_003406189.1;Name=WP_003406189.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215695.1;locus_tag=AL60_RS24735;product=DEAD/DEAH box helicase family protein;protein_id=WP_003406189.1;transl_table=11 NZ_KK316862.1 RefSeq gene 35857 42114 . + . ID=gene-AL60_RS24740;Name=pks2;gbkey=Gene;gene=pks2;gene_biotype=protein_coding;locus_tag=AL60_RS24740;old_locus_tag=AL60_03929 NZ_KK316862.1 Protein Homology CDS 35857 42114 . + 0 ID=cds-WP_003406192.1;Parent=gene-AL60_RS24740;Dbxref=GenBank:WP_003406192.1;Name=WP_003406192.1;gbkey=CDS;gene=pks2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799162.1;locus_tag=AL60_RS24740;product=sulfolipid-1 biosynthesis phthioceranic/hydroxyphthioceranic acid synthase;protein_id=WP_003406192.1;transl_table=11 NZ_KK316862.1 RefSeq gene 42167 43585 . + . ID=gene-AL60_RS24745;Name=papA3;gbkey=Gene;gene=papA3;gene_biotype=protein_coding;locus_tag=AL60_RS24745;old_locus_tag=AL60_03930 NZ_KK316862.1 Protein Homology CDS 42167 43585 . + 0 ID=cds-WP_003898759.1;Parent=gene-AL60_RS24745;Dbxref=GenBank:WP_003898759.1;Name=WP_003898759.1;gbkey=CDS;gene=papA3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215698.1;locus_tag=AL60_RS24745;product=acyltransferase PapA3;protein_id=WP_003898759.1;transl_table=11 NZ_KK316862.1 RefSeq gene 43607 46660 . + . ID=gene-AL60_RS24750;Name=mmpL10;gbkey=Gene;gene=mmpL10;gene_biotype=protein_coding;locus_tag=AL60_RS24750;old_locus_tag=AL60_03931 NZ_KK316862.1 Protein Homology CDS 43607 46660 . + 0 ID=cds-WP_256381313.1;Parent=gene-AL60_RS24750;Dbxref=GenBank:WP_256381313.1;Name=WP_256381313.1;gbkey=CDS;gene=mmpL10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003889070.1;locus_tag=AL60_RS24750;product=RND transporter MmpL10;protein_id=WP_256381313.1;transl_table=11 NZ_KK316862.1 RefSeq gene 46664 47743 . - . ID=gene-AL60_RS24755;Name=chp2;gbkey=Gene;gene=chp2;gene_biotype=protein_coding;locus_tag=AL60_RS24755;old_locus_tag=AL60_03932 NZ_KK316862.1 Protein Homology CDS 46664 47743 . - 0 ID=cds-WP_003406195.1;Parent=gene-AL60_RS24755;Dbxref=GenBank:WP_003406195.1;Name=WP_003406195.1;gbkey=CDS;gene=chp2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215700.1;locus_tag=AL60_RS24755;product=diacyltrehalose acyltransferase Chp2;protein_id=WP_003406195.1;transl_table=11 NZ_KK316862.1 RefSeq gene 47908 49644 . - . ID=gene-AL60_RS24760;Name=fadD21;gbkey=Gene;gene=fadD21;gene_biotype=protein_coding;locus_tag=AL60_RS24760;old_locus_tag=AL60_03933 NZ_KK316862.1 Protein Homology CDS 47908 49644 . - 0 ID=cds-WP_003406196.1;Parent=gene-AL60_RS24760;Dbxref=GenBank:WP_003406196.1;Name=WP_003406196.1;gbkey=CDS;gene=fadD21;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215701.1;locus_tag=AL60_RS24760;product=fatty-acid--AMP ligase FAAL21/FadD21;protein_id=WP_003406196.1;transl_table=11 NZ_KK316862.1 RefSeq gene 49821 51437 . - . ID=gene-AL60_RS24765;Name=AL60_RS24765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24765;old_locus_tag=AL60_03934 NZ_KK316862.1 Protein Homology CDS 49821 51437 . - 0 ID=cds-WP_003406197.1;Parent=gene-AL60_RS24765;Dbxref=GenBank:WP_003406197.1;Name=WP_003406197.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215702.1;locus_tag=AL60_RS24765;product=PucR family transcriptional regulator;protein_id=WP_003406197.1;transl_table=11 NZ_KK316862.1 RefSeq gene 51522 53153 . + . ID=gene-AL60_RS24770;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=AL60_RS24770;old_locus_tag=AL60_03935 NZ_KK316862.1 Protein Homology CDS 51522 53153 . + 0 ID=cds-WP_003900286.1;Parent=gene-AL60_RS24770;Dbxref=GenBank:WP_003900286.1;Name=WP_003900286.1;Ontology_term=GO:0010133,GO:0003842;gbkey=CDS;gene=pruA;go_function=L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA;go_process=L-proline catabolic process to L-glutamate|0010133||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215703.1;locus_tag=AL60_RS24770;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_003900286.1;transl_table=11 NZ_KK316862.1 RefSeq gene 53153 54142 . + . ID=gene-AL60_RS24775;Name=AL60_RS24775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24775;old_locus_tag=AL60_03936 NZ_KK316862.1 Protein Homology CDS 53153 54142 . + 0 ID=cds-WP_003900287.1;Parent=gene-AL60_RS24775;Dbxref=GenBank:WP_003900287.1;Name=WP_003900287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215704.1;locus_tag=AL60_RS24775;product=proline dehydrogenase family protein;protein_id=WP_003900287.1;transl_table=11 NZ_KK316862.1 RefSeq gene 54224 55096 . + . ID=gene-AL60_RS24780;Name=sigI;gbkey=Gene;gene=sigI;gene_biotype=protein_coding;locus_tag=AL60_RS24780;old_locus_tag=AL60_03937 NZ_KK316862.1 Protein Homology CDS 54224 55096 . + 0 ID=cds-WP_003406207.1;Parent=gene-AL60_RS24780;Dbxref=GenBank:WP_003406207.1;Name=WP_003406207.1;gbkey=CDS;gene=sigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215705.1;locus_tag=AL60_RS24780;product=RNA polymerase sigma factor SigI;protein_id=WP_003406207.1;transl_table=11 NZ_KK316862.1 RefSeq gene 55112 55990 . + . ID=gene-AL60_RS24785;Name=AL60_RS24785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24785;old_locus_tag=AL60_03938 NZ_KK316862.1 Protein Homology CDS 55112 55990 . + 0 ID=cds-WP_003406212.1;Parent=gene-AL60_RS24785;Dbxref=GenBank:WP_003406212.1;Name=WP_003406212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215706.1;locus_tag=AL60_RS24785;product=alpha/beta fold hydrolase;protein_id=WP_003406212.1;transl_table=11 NZ_KK316862.1 RefSeq gene 56063 56977 . + . ID=gene-AL60_RS24790;Name=AL60_RS24790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24790;old_locus_tag=AL60_03939 NZ_KK316862.1 Protein Homology CDS 56063 56977 . + 0 ID=cds-WP_003406215.1;Parent=gene-AL60_RS24790;Dbxref=GenBank:WP_003406215.1;Name=WP_003406215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215707.1;locus_tag=AL60_RS24790;product=alpha/beta fold hydrolase;protein_id=WP_003406215.1;transl_table=11 NZ_KK316862.1 RefSeq gene 57059 57886 . + . ID=gene-AL60_RS24795;Name=AL60_RS24795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24795;old_locus_tag=AL60_03940 NZ_KK316862.1 Protein Homology CDS 57059 57886 . + 0 ID=cds-WP_003898763.1;Parent=gene-AL60_RS24795;Dbxref=GenBank:WP_003898763.1;Name=WP_003898763.1;Ontology_term=GO:0016042,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215708.1;locus_tag=AL60_RS24795;product=esterase/lipase family protein;protein_id=WP_003898763.1;transl_table=11 NZ_KK316862.1 RefSeq gene 57926 59347 . + . ID=gene-AL60_RS24800;Name=AL60_RS24800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24800;old_locus_tag=AL60_03941 NZ_KK316862.1 Protein Homology CDS 57926 59347 . + 0 ID=cds-WP_003406218.1;Parent=gene-AL60_RS24800;Dbxref=GenBank:WP_003406218.1;Name=WP_003406218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215709.1;locus_tag=AL60_RS24800;product=acyl-CoA synthetase;protein_id=WP_003406218.1;transl_table=11 NZ_KK316862.1 RefSeq gene 59380 60645 . - . ID=gene-AL60_RS24805;Name=AL60_RS24805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24805;old_locus_tag=AL60_03942 NZ_KK316862.1 Protein Homology CDS 59380 60645 . - 0 ID=cds-WP_003406219.1;Parent=gene-AL60_RS24805;Dbxref=GenBank:WP_003406219.1;Name=WP_003406219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215710.1;locus_tag=AL60_RS24805;product=Rv1453 family transcriptional regulator;protein_id=WP_003406219.1;transl_table=11 NZ_KK316862.1 RefSeq gene 61135 61434 . + . ID=gene-AL60_RS24810;Name=AL60_RS24810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24810;old_locus_tag=AL60_03943 NZ_KK316862.1 Protein Homology CDS 61135 61434 . + 0 ID=cds-WP_003406222.1;Parent=gene-AL60_RS24810;Dbxref=GenBank:WP_003406222.1;Name=WP_003406222.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177794.1;locus_tag=AL60_RS24810;product=PE family protein;protein_id=WP_003406222.1;transl_table=11 NZ_KK316862.1 RefSeq gene 61481 62656 . + . ID=gene-AL60_RS24815;Name=AL60_RS24815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24815;old_locus_tag=AL60_03944 NZ_KK316862.1 Protein Homology CDS 61481 62656 . + 0 ID=cds-WP_009938333.1;Parent=gene-AL60_RS24815;Dbxref=GenBank:WP_009938333.1;Name=WP_009938333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177795.1;locus_tag=AL60_RS24815;product=PPE family protein PPE18;protein_id=WP_009938333.1;transl_table=11 ##sequence-region NZ_KK316863.1 1 52383 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316863.1 RefSeq region 1 52383 . + . ID=NZ_KK316863.1:1..52383;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316863.1 RefSeq pseudogene 1 629 . - . ID=gene-AL60_RS0105540;Name=espK;gbkey=Gene;gene=espK;gene_biotype=pseudogene;locus_tag=AL60_RS0105540;partial=true;pseudo=true;start_range=.,1 NZ_KK316863.1 Protein Homology CDS 1 629 . - 0 ID=cds-AL60_RS0105540;Parent=gene-AL60_RS0105540;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=espK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218396.1;locus_tag=AL60_RS0105540;partial=true;product=type VII secretion system ESX-1 associated protein EspK;pseudo=true;start_range=.,1;transl_table=11 NZ_KK316863.1 RefSeq gene 1046 1393 . - . ID=gene-AL60_RS24820;Name=espL;gbkey=Gene;gene=espL;gene_biotype=protein_coding;locus_tag=AL60_RS24820;old_locus_tag=AL60_03945 NZ_KK316863.1 Protein Homology CDS 1046 1393 . - 0 ID=cds-WP_003399988.1;Parent=gene-AL60_RS24820;Dbxref=GenBank:WP_003399988.1;Name=WP_003399988.1;gbkey=CDS;gene=espL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218397.1;locus_tag=AL60_RS24820;product=type VII secretion system ESX-1 associated protein EspL;protein_id=WP_003399988.1;transl_table=11 NZ_KK316863.1 RefSeq gene 1390 2772 . - . ID=gene-AL60_RS24825;Name=espB;gbkey=Gene;gene=espB;gene_biotype=protein_coding;locus_tag=AL60_RS24825;old_locus_tag=AL60_03946 NZ_KK316863.1 Protein Homology CDS 1390 2772 . - 0 ID=cds-WP_012054386.1;Parent=gene-AL60_RS24825;Dbxref=GenBank:WP_012054386.1;Name=WP_012054386.1;gbkey=CDS;gene=espB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218398.1;locus_tag=AL60_RS24825;product=EspB family ESX-1 secretion system-associated protein;protein_id=WP_012054386.1;transl_table=11 NZ_KK316863.1 RefSeq gene 2879 4267 . - . ID=gene-AL60_RS24830;Name=eccE1;gbkey=Gene;gene=eccE1;gene_biotype=protein_coding;locus_tag=AL60_RS24830;old_locus_tag=AL60_03947 NZ_KK316863.1 Protein Homology CDS 2879 4267 . - 0 ID=cds-WP_003400000.1;Parent=gene-AL60_RS24830;Dbxref=GenBank:WP_003400000.1;Name=WP_003400000.1;gbkey=CDS;gene=eccE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218399.1;locus_tag=AL60_RS24830;product=type VII secretion system ESX-1 subunit EccE1;protein_id=WP_003400000.1;transl_table=11 NZ_KK316863.1 RefSeq gene 4264 5604 . - . ID=gene-AL60_RS24835;Name=mycP1;gbkey=Gene;gene=mycP1;gene_biotype=protein_coding;locus_tag=AL60_RS24835;old_locus_tag=AL60_03948 NZ_KK316863.1 Protein Homology CDS 4264 5604 . - 0 ID=cds-WP_003400004.1;Parent=gene-AL60_RS24835;Dbxref=GenBank:WP_003400004.1;Name=WP_003400004.1;gbkey=CDS;gene=mycP1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218400.1;locus_tag=AL60_RS24835;product=type VII secretion system ESX-1 serine protease mycosin MycP1;protein_id=WP_003400004.1;transl_table=11 NZ_KK316863.1 RefSeq gene 5826 7685 . - . ID=gene-AL60_RS24840;Name=eccA2;gbkey=Gene;gene=eccA2;gene_biotype=protein_coding;locus_tag=AL60_RS24840;old_locus_tag=AL60_03949 NZ_KK316863.1 Protein Homology CDS 5826 7685 . - 0 ID=cds-WP_003907154.1;Parent=gene-AL60_RS24840;Dbxref=GenBank:WP_003907154.1;Name=WP_003907154.1;gbkey=CDS;gene=eccA2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218401.1;locus_tag=AL60_RS24840;product=type VII secretion system ESX-2 AAA family ATPase EccA2;protein_id=WP_003907154.1;transl_table=11 NZ_KK316863.1 RefSeq gene 7755 9368 . - . ID=gene-AL60_RS24845;Name=eccE2;gbkey=Gene;gene=eccE2;gene_biotype=protein_coding;locus_tag=AL60_RS24845;old_locus_tag=AL60_03950 NZ_KK316863.1 Protein Homology CDS 7755 9368 . - 0 ID=cds-WP_003902572.1;Parent=gene-AL60_RS24845;Dbxref=GenBank:WP_003902572.1;Name=WP_003902572.1;gbkey=CDS;gene=eccE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218402.1;locus_tag=AL60_RS24845;product=type VII secretion system ESX-2 subunit EccE2;protein_id=WP_003902572.1;transl_table=11 NZ_KK316863.1 RefSeq gene 9365 11017 . - . ID=gene-AL60_RS24850;Name=mycP2;gbkey=Gene;gene=mycP2;gene_biotype=protein_coding;locus_tag=AL60_RS24850;old_locus_tag=AL60_03951 NZ_KK316863.1 Protein Homology CDS 9365 11017 . - 0 ID=cds-WP_003400012.1;Parent=gene-AL60_RS24850;Dbxref=GenBank:WP_003400012.1;Name=WP_003400012.1;gbkey=CDS;gene=mycP2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218403.1;locus_tag=AL60_RS24850;product=type VII secretion system ESX-2 serine protease mycosin MycP2;protein_id=WP_003400012.1;transl_table=11 NZ_KK316863.1 RefSeq gene 11002 12531 . - . ID=gene-AL60_RS24855;Name=eccD2;gbkey=Gene;gene=eccD2;gene_biotype=protein_coding;locus_tag=AL60_RS24855;old_locus_tag=AL60_03952 NZ_KK316863.1 Protein Homology CDS 11002 12531 . - 0 ID=cds-WP_003900775.1;Parent=gene-AL60_RS24855;Dbxref=GenBank:WP_003900775.1;Name=WP_003900775.1;gbkey=CDS;gene=eccD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218404.1;locus_tag=AL60_RS24855;product=type VII secretion system ESX-2 subunit EccD2;protein_id=WP_003900775.1;transl_table=11 NZ_KK316863.1 RefSeq gene 12528 13553 . - . ID=gene-AL60_RS24860;Name=AL60_RS24860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24860;old_locus_tag=AL60_03953 NZ_KK316863.1 Protein Homology CDS 12528 13553 . - 0 ID=cds-WP_003899748.1;Parent=gene-AL60_RS24860;Dbxref=GenBank:WP_003899748.1;Name=WP_003899748.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218405.1;locus_tag=AL60_RS24860;product=MinD/ParA family ATP-binding protein;protein_id=WP_003899748.1;transl_table=11 NZ_KK316863.1 RefSeq gene 13647 14477 . - . ID=gene-AL60_RS24865;Name=espG2;gbkey=Gene;gene=espG2;gene_biotype=protein_coding;locus_tag=AL60_RS24865;old_locus_tag=AL60_03954 NZ_KK316863.1 Protein Homology CDS 13647 14477 . - 0 ID=cds-WP_003400028.1;Parent=gene-AL60_RS24865;Dbxref=GenBank:WP_003400028.1;Name=WP_003400028.1;gbkey=CDS;gene=espG2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218406.1;locus_tag=AL60_RS24865;product=type VII secretion system ESX-2 associated protein EspG2;protein_id=WP_003400028.1;transl_table=11 NZ_KK316863.1 RefSeq gene 14573 14860 . - . ID=gene-AL60_RS24870;Name=esxC;gbkey=Gene;gene=esxC;gene_biotype=protein_coding;locus_tag=AL60_RS24870;old_locus_tag=AL60_03955 NZ_KK316863.1 Protein Homology CDS 14573 14860 . - 0 ID=cds-WP_003899750.1;Parent=gene-AL60_RS24870;Dbxref=GenBank:WP_003899750.1;Name=WP_003899750.1;Ontology_term=GO:0005576;gbkey=CDS;gene=esxC;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218407.1;locus_tag=AL60_RS24870;product=WXG100 family type VII secretion target;protein_id=WP_003899750.1;transl_table=11 NZ_KK316863.1 RefSeq gene 14896 15219 . - . ID=gene-AL60_RS24875;Name=esxD;gbkey=Gene;gene=esxD;gene_biotype=protein_coding;locus_tag=AL60_RS24875;old_locus_tag=AL60_03956 NZ_KK316863.1 Protein Homology CDS 14896 15219 . - 0 ID=cds-WP_003899751.1;Parent=gene-AL60_RS24875;Dbxref=GenBank:WP_003899751.1;Name=WP_003899751.1;Ontology_term=GO:0005576;gbkey=CDS;gene=esxD;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218408.1;locus_tag=AL60_RS24875;product=WXG100 family type VII secretion target;protein_id=WP_003899751.1;transl_table=11 NZ_KK316863.1 RefSeq gene 15331 16530 . - . ID=gene-AL60_RS24880;Name=AL60_RS24880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24880;old_locus_tag=AL60_03957 NZ_KK316863.1 Protein Homology CDS 15331 16530 . - 0 ID=cds-WP_003899752.1;Parent=gene-AL60_RS24880;Dbxref=GenBank:WP_003899752.1;Name=WP_003899752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178024.1;locus_tag=AL60_RS24880;product=PPE family protein;protein_id=WP_003899752.1;transl_table=11 NZ_KK316863.1 RefSeq gene 16609 16842 . - . ID=gene-AL60_RS24885;Name=AL60_RS24885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24885;old_locus_tag=AL60_03958 NZ_KK316863.1 Protein Homology CDS 16609 16842 . - 0 ID=cds-WP_003400047.1;Parent=gene-AL60_RS24885;Dbxref=GenBank:WP_003400047.1;Name=WP_003400047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178025.1;locus_tag=AL60_RS24885;product=PE domain-containing protein;protein_id=WP_003400047.1;transl_table=11 NZ_KK316863.1 RefSeq gene 17109 21299 . - . ID=gene-AL60_RS24890;Name=eccC2;gbkey=Gene;gene=eccC2;gene_biotype=protein_coding;locus_tag=AL60_RS24890;old_locus_tag=AL60_03959 NZ_KK316863.1 Protein Homology CDS 17109 21299 . - 0 ID=cds-WP_003400060.1;Parent=gene-AL60_RS24890;Dbxref=GenBank:WP_003400060.1;Name=WP_003400060.1;gbkey=CDS;gene=eccC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218411.1;locus_tag=AL60_RS24890;product=type VII secretion system ESX-2 FtsK/SpoIIIE family ATPase EccC2;protein_id=WP_003400060.1;transl_table=11 NZ_KK316863.1 RefSeq gene 21300 22787 . - . ID=gene-AL60_RS24895;Name=eccB2;gbkey=Gene;gene=eccB2;gene_biotype=protein_coding;locus_tag=AL60_RS24895;old_locus_tag=AL60_03960 NZ_KK316863.1 Protein Homology CDS 21300 22787 . - 0 ID=cds-WP_003400065.1;Parent=gene-AL60_RS24895;Dbxref=GenBank:WP_003400065.1;Name=WP_003400065.1;gbkey=CDS;gene=eccB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218412.1;locus_tag=AL60_RS24895;product=type VII secretion system ESX-2 subunit EccB2;protein_id=WP_003400065.1;transl_table=11 NZ_KK316863.1 RefSeq gene 22790 23698 . - . ID=gene-AL60_RS24900;Name=AL60_RS24900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24900;old_locus_tag=AL60_03961 NZ_KK316863.1 Protein Homology CDS 22790 23698 . - 0 ID=cds-WP_003899753.1;Parent=gene-AL60_RS24900;Dbxref=GenBank:WP_003899753.1;Name=WP_003899753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218413.1;locus_tag=AL60_RS24900;product=transglycosylase SLT domain-containing protein;protein_id=WP_003899753.1;transl_table=11 NZ_KK316863.1 RefSeq gene 23848 24492 . - . ID=gene-AL60_RS0105545;Name=AL60_RS0105545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105545;old_locus_tag=AL60_03962 NZ_KK316863.1 GeneMarkS-2+ CDS 23848 24492 . - 0 ID=cds-WP_003899754.1;Parent=gene-AL60_RS0105545;Dbxref=GenBank:WP_003899754.1;Name=WP_003899754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS0105545;product=hypothetical protein;protein_id=WP_003899754.1;transl_table=11 NZ_KK316863.1 RefSeq gene 24505 24837 . - . ID=gene-AL60_RS24905;Name=AL60_RS24905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24905;old_locus_tag=AL60_03963 NZ_KK316863.1 Protein Homology CDS 24505 24837 . - 0 ID=cds-WP_003900777.1;Parent=gene-AL60_RS24905;Dbxref=GenBank:WP_003900777.1;Name=WP_003900777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218415.1;locus_tag=AL60_RS24905;product=hypothetical protein;protein_id=WP_003900777.1;transl_table=11 NZ_KK316863.1 RefSeq gene 24999 26177 . - . ID=gene-AL60_RS27775;Name=AL60_RS27775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27775;old_locus_tag=AL60_03964 NZ_KK316863.1 Protein Homology CDS 24999 26177 . - 0 ID=cds-WP_003917986.1;Parent=gene-AL60_RS27775;Dbxref=GenBank:WP_003917986.1;Name=WP_003917986.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037368.6;locus_tag=AL60_RS27775;product=DUF5631 domain-containing protein;protein_id=WP_003917986.1;transl_table=11 NZ_KK316863.1 RefSeq gene 26225 27160 . - . ID=gene-AL60_RS27780;Name=AL60_RS27780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27780;old_locus_tag=AL60_03965 NZ_KK316863.1 Protein Homology CDS 26225 27160 . - 0 ID=cds-WP_003899756.1;Parent=gene-AL60_RS27780;Dbxref=GenBank:WP_003899756.1;Name=WP_003899756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218417.1;locus_tag=AL60_RS27780;product=hypothetical protein;protein_id=WP_003899756.1;transl_table=11 NZ_KK316863.1 RefSeq gene 27217 27666 . - . ID=gene-AL60_RS24920;Name=AL60_RS24920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24920;old_locus_tag=AL60_03966 NZ_KK316863.1 Protein Homology CDS 27217 27666 . - 0 ID=cds-WP_003400081.1;Parent=gene-AL60_RS24920;Dbxref=GenBank:WP_003400081.1;Name=WP_003400081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218418.1;locus_tag=AL60_RS24920;product=hypothetical protein;protein_id=WP_003400081.1;transl_table=11 NZ_KK316863.1 RefSeq gene 27654 27839 . + . ID=gene-AL60_RS27300;Name=AL60_RS27300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27300 NZ_KK316863.1 Protein Homology CDS 27654 27839 . + 0 ID=cds-WP_003899758.1;Parent=gene-AL60_RS27300;Dbxref=GenBank:WP_003899758.1;Name=WP_003899758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899758.1;locus_tag=AL60_RS27300;product=hypothetical protein;protein_id=WP_003899758.1;transl_table=11 NZ_KK316863.1 RefSeq gene 28217 28747 . - . ID=gene-AL60_RS24925;Name=ift;gbkey=Gene;gene=ift;gene_biotype=protein_coding;locus_tag=AL60_RS24925;old_locus_tag=AL60_03967 NZ_KK316863.1 Protein Homology CDS 28217 28747 . - 0 ID=cds-WP_003400086.1;Parent=gene-AL60_RS24925;Dbxref=GenBank:WP_003400086.1;Name=WP_003400086.1;gbkey=CDS;gene=ift;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218419.1;locus_tag=AL60_RS24925;product=necrotizing toxin immunity factor IFT;protein_id=WP_003400086.1;transl_table=11 NZ_KK316863.1 RefSeq gene 28744 31284 . - . ID=gene-AL60_RS24930;Name=cpnT;gbkey=Gene;gene=cpnT;gene_biotype=protein_coding;locus_tag=AL60_RS24930;old_locus_tag=AL60_03968 NZ_KK316863.1 Protein Homology CDS 28744 31284 . - 0 ID=cds-WP_012054389.1;Parent=gene-AL60_RS24930;Dbxref=GenBank:WP_012054389.1;Name=WP_012054389.1;gbkey=CDS;gene=cpnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218420.1;locus_tag=AL60_RS24930;product=outer membrane channel protein/necrotizing toxin glycohydrolase CpnT;protein_id=WP_012054389.1;transl_table=11 NZ_KK316863.1 RefSeq gene 31289 31561 . - . ID=gene-AL60_RS24935;Name=esxE;gbkey=Gene;gene=esxE;gene_biotype=protein_coding;locus_tag=AL60_RS24935;old_locus_tag=AL60_03969 NZ_KK316863.1 Protein Homology CDS 31289 31561 . - 0 ID=cds-WP_003400094.1;Parent=gene-AL60_RS24935;Dbxref=GenBank:WP_003400094.1;Name=WP_003400094.1;gbkey=CDS;gene=esxE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400094.1;locus_tag=AL60_RS24935;product=pore-forming CpnT exporter EsxE;protein_id=WP_003400094.1;transl_table=11 NZ_KK316863.1 RefSeq gene 31572 31883 . - . ID=gene-AL60_RS24940;Name=esxF;gbkey=Gene;gene=esxF;gene_biotype=protein_coding;locus_tag=AL60_RS24940;old_locus_tag=AL60_03970 NZ_KK316863.1 Protein Homology CDS 31572 31883 . - 0 ID=cds-WP_003400100.1;Parent=gene-AL60_RS24940;Dbxref=GenBank:WP_003400100.1;Name=WP_003400100.1;gbkey=CDS;gene=esxF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218422.1;locus_tag=AL60_RS24940;product=pore-forming CpnT exporter EsxF;protein_id=WP_003400100.1;transl_table=11 NZ_KK316863.1 RefSeq gene 31949 32458 . - . ID=gene-AL60_RS24945;Name=AL60_RS24945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24945;old_locus_tag=AL60_03971 NZ_KK316863.1 Protein Homology CDS 31949 32458 . - 0 ID=cds-WP_003400109.1;Parent=gene-AL60_RS24945;Dbxref=GenBank:WP_003400109.1;Name=WP_003400109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218423.1;locus_tag=AL60_RS24945;product=hypothetical protein;protein_id=WP_003400109.1;transl_table=11 NZ_KK316863.1 RefSeq gene 32483 33925 . - . ID=gene-AL60_RS24950;Name=pcnA;gbkey=Gene;gene=pcnA;gene_biotype=protein_coding;locus_tag=AL60_RS24950;old_locus_tag=AL60_03972 NZ_KK316863.1 Protein Homology CDS 32483 33925 . - 0 ID=cds-WP_003400120.1;Parent=gene-AL60_RS24950;Dbxref=GenBank:WP_003400120.1;Name=WP_003400120.1;Ontology_term=GO:0006396,GO:0003723,GO:0016779;gbkey=CDS;gene=pcnA;go_function=RNA binding|0003723||IEA,nucleotidyltransferase activity|0016779||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178026.1;locus_tag=AL60_RS24950;product=CCA tRNA nucleotidyltransferase;protein_id=WP_003400120.1;transl_table=11 NZ_KK316863.1 RefSeq gene 34301 35047 . + . ID=gene-AL60_RS24955;Name=AL60_RS24955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24955;old_locus_tag=AL60_03973 NZ_KK316863.1 Protein Homology CDS 34301 35047 . + 0 ID=cds-WP_003400124.1;Parent=gene-AL60_RS24955;Dbxref=GenBank:WP_003400124.1;Name=WP_003400124.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218425.1;locus_tag=AL60_RS24955;product=NUDIX hydrolase;protein_id=WP_003400124.1;transl_table=11 NZ_KK316863.1 RefSeq gene 35044 37452 . + . ID=gene-AL60_RS24960;Name=AL60_RS24960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24960;old_locus_tag=AL60_03974 NZ_KK316863.1 Protein Homology CDS 35044 37452 . + 0 ID=cds-WP_003900781.1;Parent=gene-AL60_RS24960;Dbxref=GenBank:WP_003900781.1;Name=WP_003900781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218426.1;locus_tag=AL60_RS24960;product=DUF6049 family protein;protein_id=WP_003900781.1;transl_table=11 NZ_KK316863.1 RefSeq gene 37449 41003 . + . ID=gene-AL60_RS24965;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=AL60_RS24965;old_locus_tag=AL60_03975 NZ_KK316863.1 Protein Homology CDS 37449 41003 . + 0 ID=cds-WP_003902580.1;Parent=gene-AL60_RS24965;Dbxref=GenBank:WP_003902580.1;Name=WP_003902580.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218427.1;locus_tag=AL60_RS24965;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_003902580.1;transl_table=11 NZ_KK316863.1 RefSeq gene 41038 41628 . + . ID=gene-AL60_RS24970;Name=sigM;gbkey=Gene;gene=sigM;gene_biotype=protein_coding;locus_tag=AL60_RS24970;old_locus_tag=AL60_03976 NZ_KK316863.1 Protein Homology CDS 41038 41628 . + 0 ID=cds-WP_003400144.1;Parent=gene-AL60_RS24970;Dbxref=GenBank:WP_003400144.1;Name=WP_003400144.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=sigM;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917992.1;locus_tag=AL60_RS24970;product=RNA polymerase sigma factor SigM;protein_id=WP_003400144.1;transl_table=11 NZ_KK316863.1 RefSeq gene 41721 42485 . + . ID=gene-AL60_RS24975;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AL60_RS24975;old_locus_tag=AL60_03977 NZ_KK316863.1 Protein Homology CDS 41721 42485 . + 0 ID=cds-WP_003400148.1;Parent=gene-AL60_RS24975;Dbxref=GenBank:WP_003400148.1;Name=WP_003400148.1;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218429.1;locus_tag=AL60_RS24975;product=anti-sigma-M factor RsmA;protein_id=WP_003400148.1;transl_table=11 NZ_KK316863.1 RefSeq gene 42579 43586 . + . ID=gene-AL60_RS24980;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=AL60_RS24980;old_locus_tag=AL60_03978 NZ_KK316863.1 Protein Homology CDS 42579 43586 . + 0 ID=cds-WP_003900782.1;Parent=gene-AL60_RS24980;Dbxref=GenBank:WP_003900782.1;Name=WP_003900782.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218430.1;locus_tag=AL60_RS24980;product=thioredoxin-disulfide reductase;protein_id=WP_003900782.1;transl_table=11 NZ_KK316863.1 RefSeq gene 43583 43933 . + . ID=gene-AL60_RS24985;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AL60_RS24985;old_locus_tag=AL60_03979 NZ_KK316863.1 Protein Homology CDS 43583 43933 . + 0 ID=cds-WP_003400164.1;Parent=gene-AL60_RS24985;Dbxref=GenBank:WP_003400164.1;Name=WP_003400164.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218431.1;locus_tag=AL60_RS24985;product=thioredoxin;protein_id=WP_003400164.1;transl_table=11 NZ_KK316863.1 RefSeq gene 44043 45263 . + . ID=gene-AL60_RS24990;Name=cwlM;gbkey=Gene;gene=cwlM;gene_biotype=protein_coding;locus_tag=AL60_RS24990;old_locus_tag=AL60_03980 NZ_KK316863.1 Protein Homology CDS 44043 45263 . + 0 ID=cds-WP_003400168.1;Parent=gene-AL60_RS24990;Dbxref=GenBank:WP_003400168.1;Name=WP_003400168.1;gbkey=CDS;gene=cwlM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178027.1;locus_tag=AL60_RS24990;product=N-acetylmuramoyl-L-alanine amidase CwlM;protein_id=WP_003400168.1;transl_table=11 NZ_KK316863.1 RefSeq gene 45284 46018 . - . ID=gene-AL60_RS24995;Name=AL60_RS24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS24995;old_locus_tag=AL60_03981 NZ_KK316863.1 Protein Homology CDS 45284 46018 . - 0 ID=cds-WP_003400171.1;Parent=gene-AL60_RS24995;Dbxref=GenBank:WP_003400171.1;Name=WP_003400171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218433.1;locus_tag=AL60_RS24995;product=hypothetical protein;protein_id=WP_003400171.1;transl_table=11 NZ_KK316863.1 RefSeq gene 46308 47342 . - . ID=gene-AL60_RS25000;Name=parB;gbkey=Gene;gene=parB;gene_biotype=protein_coding;locus_tag=AL60_RS25000;old_locus_tag=AL60_03982 NZ_KK316863.1 Protein Homology CDS 46308 47342 . - 0 ID=cds-WP_003400175.1;Parent=gene-AL60_RS25000;Dbxref=GenBank:WP_003400175.1;Name=WP_003400175.1;Ontology_term=GO:0003677;gbkey=CDS;gene=parB;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218435.2;locus_tag=AL60_RS25000;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_003400175.1;transl_table=11 NZ_KK316863.1 RefSeq gene 47339 48382 . - . ID=gene-AL60_RS25005;Name=parA;gbkey=Gene;gene=parA;gene_biotype=protein_coding;locus_tag=AL60_RS25005;old_locus_tag=AL60_03983 NZ_KK316863.1 Protein Homology CDS 47339 48382 . - 0 ID=cds-WP_003400180.1;Parent=gene-AL60_RS25005;Dbxref=GenBank:WP_003400180.1;Name=WP_003400180.1;gbkey=CDS;gene=parA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218434.2;locus_tag=AL60_RS25005;product=chromosome partitioning protein ParA;protein_id=WP_003400180.1;transl_table=11 NZ_KK316863.1 RefSeq gene 48379 49053 . - . ID=gene-AL60_RS25010;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=AL60_RS25010;old_locus_tag=AL60_03984 NZ_KK316863.1 Protein Homology CDS 48379 49053 . - 0 ID=cds-WP_003907165.1;Parent=gene-AL60_RS25010;Dbxref=GenBank:WP_003907165.1;Name=WP_003907165.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218436.2;locus_tag=AL60_RS25010;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_003907165.1;transl_table=11 NZ_KK316863.1 RefSeq gene 49185 49748 . - . ID=gene-AL60_RS25015;Name=AL60_RS25015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25015;old_locus_tag=AL60_03985 NZ_KK316863.1 Protein Homology CDS 49185 49748 . - 0 ID=cds-WP_003899764.1;Parent=gene-AL60_RS25015;Dbxref=GenBank:WP_003899764.1;Name=WP_003899764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218437.1;locus_tag=AL60_RS25015;product=Jag family protein;protein_id=WP_003899764.1;transl_table=11 NZ_KK316863.1 RefSeq gene 49820 50920 . - . ID=gene-AL60_RS25020;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=AL60_RS25020;old_locus_tag=AL60_03986 NZ_KK316863.1 Protein Homology CDS 49820 50920 . - 0 ID=cds-WP_003899765.1;Parent=gene-AL60_RS25020;Dbxref=GenBank:WP_003899765.1;Name=WP_003899765.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218438.1;locus_tag=AL60_RS25020;product=membrane protein insertase YidC;protein_id=WP_003899765.1;transl_table=11 NZ_KK316863.1 RefSeq gene 50904 51266 . - . ID=gene-AL60_RS25025;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=AL60_RS25025;old_locus_tag=AL60_03987 NZ_KK316863.1 Protein Homology CDS 50904 51266 . - 0 ID=cds-WP_003899766.1;Parent=gene-AL60_RS25025;Dbxref=GenBank:WP_003899766.1;Name=WP_003899766.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218439.1;locus_tag=AL60_RS25025;product=membrane protein insertion efficiency factor YidD;protein_id=WP_003899766.1;transl_table=11 NZ_KK316863.1 RefSeq gene 51263 51613 . - . ID=gene-AL60_RS25030;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AL60_RS25030;old_locus_tag=AL60_03988 NZ_KK316863.1 Protein Homology CDS 51263 51613 . - 0 ID=cds-WP_003899767.1;Parent=gene-AL60_RS25030;Dbxref=GenBank:WP_003899767.1;Name=WP_003899767.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950319.1;locus_tag=AL60_RS25030;product=ribonuclease P protein component;protein_id=WP_003899767.1;transl_table=11 NZ_KK316863.1 RefSeq gene 51637 51780 . - . ID=gene-AL60_RS25035;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AL60_RS25035;old_locus_tag=AL60_03989 NZ_KK316863.1 Protein Homology CDS 51637 51780 . - 0 ID=cds-WP_003400206.1;Parent=gene-AL60_RS25035;Dbxref=GenBank:WP_003400206.1;Name=WP_003400206.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005263481.1;locus_tag=AL60_RS25035;product=50S ribosomal protein L34;protein_id=WP_003400206.1;transl_table=11 ##sequence-region NZ_KK316864.1 1 29434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316864.1 RefSeq region 1 29434 . + . ID=NZ_KK316864.1:1..29434;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316864.1 RefSeq pseudogene 1 168 . - . ID=gene-AL60_RS26635;Name=esxV;gbkey=Gene;gene=esxV;gene_biotype=pseudogene;locus_tag=AL60_RS26635;partial=true;pseudo=true;start_range=.,1 NZ_KK316864.1 Protein Homology CDS 1 168 . - 0 ID=cds-AL60_RS26635;Parent=gene-AL60_RS26635;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=esxV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215553.1;locus_tag=AL60_RS26635;partial=true;product=type VII secretion system protein EsxV;pseudo=true;start_range=.,1;transl_table=11 NZ_KK316864.1 RefSeq gene 195 491 . - . ID=gene-AL60_RS25040;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=protein_coding;locus_tag=AL60_RS25040;old_locus_tag=AL60_03990 NZ_KK316864.1 Protein Homology CDS 195 491 . - 0 ID=cds-WP_003405345.1;Parent=gene-AL60_RS25040;Dbxref=GenBank:WP_003405345.1;Name=WP_003405345.1;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215554.1;locus_tag=AL60_RS25040;product=type VII secretion system ESX-5 protein EsxJ;protein_id=WP_003405345.1;transl_table=11 NZ_KK316864.1 RefSeq gene 637 1812 . - . ID=gene-AL60_RS25045;Name=AL60_RS25045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25045;old_locus_tag=AL60_03991 NZ_KK316864.1 Protein Homology CDS 637 1812 . - 0 ID=cds-WP_003405368.1;Parent=gene-AL60_RS25045;Dbxref=GenBank:WP_003405368.1;Name=WP_003405368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177778.1;locus_tag=AL60_RS25045;product=PPE family protein;protein_id=WP_003405368.1;transl_table=11 NZ_KK316864.1 RefSeq gene 1889 2716 . - . ID=gene-AL60_RS25050;Name=AL60_RS25050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25050;old_locus_tag=AL60_03992 NZ_KK316864.1 Protein Homology CDS 1889 2716 . - 0 ID=cds-WP_003405370.1;Parent=gene-AL60_RS25050;Dbxref=GenBank:WP_003405370.1;Name=WP_003405370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177779.1;locus_tag=AL60_RS25050;product=PE family protein PE8;protein_id=WP_003405370.1;transl_table=11 NZ_KK316864.1 RefSeq gene 3504 3743 . - . ID=gene-AL60_RS0105560;Name=AL60_RS0105560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105560 NZ_KK316864.1 Protein Homology CDS 3504 3743 . - 0 ID=cds-WP_009936438.1;Parent=gene-AL60_RS0105560;Dbxref=GenBank:WP_009936438.1;Name=WP_009936438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936438.1;locus_tag=AL60_RS0105560;product=hypothetical protein;protein_id=WP_009936438.1;transl_table=11 NZ_KK316864.1 RefSeq pseudogene 3912 4839 . - . ID=gene-AL60_RS26650;Name=AL60_RS26650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26650;old_locus_tag=AL60_03993;pseudo=true NZ_KK316864.1 Protein Homology CDS 3912 4839 . - 0 ID=cds-AL60_RS26650;Parent=gene-AL60_RS26650;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612358.1;locus_tag=AL60_RS26650;product=IS5-like element ISMt1 family transposase;pseudo=true;transl_table=11 NZ_KK316864.1 RefSeq gene 5122 6147 . - . ID=gene-AL60_RS25060;Name=AL60_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25060;old_locus_tag=AL60_03995 NZ_KK316864.1 Protein Homology CDS 5122 6147 . - 0 ID=cds-WP_003405514.1;Parent=gene-AL60_RS25060;Dbxref=GenBank:WP_003405514.1;Name=WP_003405514.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215559.1;locus_tag=AL60_RS25060;product=S1 family peptidase;protein_id=WP_003405514.1;transl_table=11 NZ_KK316864.1 RefSeq gene 6394 7017 . + . ID=gene-AL60_RS25065;Name=AL60_RS25065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25065;old_locus_tag=AL60_03996 NZ_KK316864.1 Protein Homology CDS 6394 7017 . + 0 ID=cds-WP_003405517.1;Parent=gene-AL60_RS25065;Dbxref=GenBank:WP_003405517.1;Name=WP_003405517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215560.1;locus_tag=AL60_RS25065;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_003405517.1;transl_table=11 NZ_KK316864.1 RefSeq gene 7014 7895 . + . ID=gene-AL60_RS25070;Name=AL60_RS25070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25070;old_locus_tag=AL60_03997 NZ_KK316864.1 Protein Homology CDS 7014 7895 . + 0 ID=cds-WP_003898703.1;Parent=gene-AL60_RS25070;Dbxref=GenBank:WP_003898703.1;Name=WP_003898703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215561.1;locus_tag=AL60_RS25070;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_003898703.1;transl_table=11 NZ_KK316864.1 RefSeq gene 8765 10012 . + . ID=gene-AL60_RS25075;Name=AL60_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25075;old_locus_tag=AL60_03999 NZ_KK316864.1 Protein Homology CDS 8765 10012 . + 0 ID=cds-WP_003900260.1-3;Parent=gene-AL60_RS25075;Dbxref=GenBank:WP_003900260.1;Name=WP_003900260.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL60_RS25075;product=IS256-like element IS1081 family transposase;protein_id=WP_003900260.1;transl_table=11 NZ_KK316864.1 RefSeq gene 10380 11495 . - . ID=gene-AL60_RS25080;Name=AL60_RS25080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25080;old_locus_tag=AL60_04000 NZ_KK316864.1 Protein Homology CDS 10380 11495 . - 0 ID=cds-WP_003405582.1;Parent=gene-AL60_RS25080;Dbxref=GenBank:WP_003405582.1;Name=WP_003405582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215564.1;locus_tag=AL60_RS25080;product=hypothetical protein;protein_id=WP_003405582.1;transl_table=11 NZ_KK316864.1 RefSeq gene 11452 11655 . - . ID=gene-AL60_RS0105585;Name=AL60_RS0105585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105585 NZ_KK316864.1 Protein Homology CDS 11452 11655 . - 0 ID=cds-WP_003405585.1;Parent=gene-AL60_RS0105585;Dbxref=GenBank:WP_003405585.1;Name=WP_003405585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405585.1;locus_tag=AL60_RS0105585;product=hypothetical protein;protein_id=WP_003405585.1;transl_table=11 NZ_KK316864.1 RefSeq gene 11728 12174 . + . ID=gene-AL60_RS25085;Name=AL60_RS25085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25085;old_locus_tag=AL60_04001 NZ_KK316864.1 Protein Homology CDS 11728 12174 . + 0 ID=cds-WP_003405595.1;Parent=gene-AL60_RS25085;Dbxref=GenBank:WP_003405595.1;Name=WP_003405595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215565.1;locus_tag=AL60_RS25085;product=oxidation-sensing regulator MosR;protein_id=WP_003405595.1;transl_table=11 NZ_KK316864.1 RefSeq gene 12223 13128 . + . ID=gene-AL60_RS25090;Name=AL60_RS25090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25090;old_locus_tag=AL60_04002 NZ_KK316864.1 Protein Homology CDS 12223 13128 . + 0 ID=cds-WP_003405600.1;Parent=gene-AL60_RS25090;Dbxref=GenBank:WP_003405600.1;Name=WP_003405600.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215566.1;locus_tag=AL60_RS25090;product=SDR family oxidoreductase;protein_id=WP_003405600.1;transl_table=11 NZ_KK316864.1 RefSeq pseudogene 13166 13282 . - . ID=gene-AL60_RS28210;Name=AL60_RS28210;end_range=13282,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS28210;partial=true;pseudo=true;start_range=.,13166 NZ_KK316864.1 Protein Homology CDS 13166 13282 . - 0 ID=cds-AL60_RS28210;Parent=gene-AL60_RS28210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=13282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487708.1;locus_tag=AL60_RS28210;partial=true;product=EthD domain-containing protein;pseudo=true;start_range=.,13166;transl_table=11 NZ_KK316864.1 RefSeq gene 13287 14237 . - . ID=gene-AL60_RS28215;Name=AL60_RS28215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28215;old_locus_tag=AL60_04003 NZ_KK316864.1 Protein Homology CDS 13287 14237 . - 0 ID=cds-WP_369810505.1;Parent=gene-AL60_RS28215;Dbxref=GenBank:WP_369810505.1;Name=WP_369810505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020419.6;locus_tag=AL60_RS28215;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_369810505.1;transl_table=11 NZ_KK316864.1 RefSeq gene 15203 15454 . + . ID=gene-AL60_RS27345;Name=AL60_RS27345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27345 NZ_KK316864.1 GeneMarkS-2+ CDS 15203 15454 . + 0 ID=cds-WP_003898708.1;Parent=gene-AL60_RS27345;Dbxref=GenBank:WP_003898708.1;Name=WP_003898708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL60_RS27345;product=hypothetical protein;protein_id=WP_003898708.1;transl_table=11 NZ_KK316864.1 RefSeq gene 15617 15844 . + . ID=gene-AL60_RS27350;Name=AL60_RS27350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27350 NZ_KK316864.1 Protein Homology CDS 15617 15844 . + 0 ID=cds-WP_234827446.1;Parent=gene-AL60_RS27350;Dbxref=GenBank:WP_234827446.1;Name=WP_234827446.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.6;locus_tag=AL60_RS27350;product=Fic family protein;protein_id=WP_234827446.1;transl_table=11 NZ_KK316864.1 RefSeq gene 16270 16584 . + . ID=gene-AL60_RS25110;Name=AL60_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25110;old_locus_tag=AL60_04006 NZ_KK316864.1 Protein Homology CDS 16270 16584 . + 0 ID=cds-WP_003907556.1;Parent=gene-AL60_RS25110;Dbxref=GenBank:WP_003907556.1;Name=WP_003907556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003905442.1;locus_tag=AL60_RS25110;product=integrase;protein_id=WP_003907556.1;transl_table=11 NZ_KK316864.1 RefSeq gene 16515 16715 . + . ID=gene-AL60_RS27790;Name=AL60_RS27790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27790;old_locus_tag=AL60_04007 NZ_KK316864.1 Protein Homology CDS 16515 16715 . + 0 ID=cds-WP_223695525.1;Parent=gene-AL60_RS27790;Dbxref=GenBank:WP_223695525.1;Name=WP_223695525.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=AL60_RS27790;product=site-specific integrase;protein_id=WP_223695525.1;transl_table=11 NZ_KK316864.1 RefSeq gene 16738 16811 . + . ID=gene-AL60_RS25120;Name=AL60_RS25120;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL60_RS25120;old_locus_tag=AL60_04008 NZ_KK316864.1 tRNAscan-SE tRNA 16738 16811 . + . ID=rna-AL60_RS25120;Parent=gene-AL60_RS25120;anticodon=(pos:16772..16774);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS25120;product=tRNA-Leu NZ_KK316864.1 tRNAscan-SE exon 16738 16811 . + . ID=exon-AL60_RS25120-1;Parent=rna-AL60_RS25120;anticodon=(pos:16772..16774);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL60_RS25120;product=tRNA-Leu NZ_KK316864.1 RefSeq gene 16970 17734 . + . ID=gene-AL60_RS25125;Name=AL60_RS25125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25125;old_locus_tag=AL60_04009 NZ_KK316864.1 Protein Homology CDS 16970 17734 . + 0 ID=cds-WP_003900263.1;Parent=gene-AL60_RS25125;Dbxref=GenBank:WP_003900263.1;Name=WP_003900263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215572.1;locus_tag=AL60_RS25125;product=DUF427 domain-containing protein;protein_id=WP_003900263.1;transl_table=11 NZ_KK316864.1 RefSeq gene 17946 18110 . - . ID=gene-AL60_RS28040;Name=AL60_RS28040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28040 NZ_KK316864.1 Protein Homology CDS 17946 18110 . - 0 ID=cds-WP_003898712.1;Parent=gene-AL60_RS28040;Dbxref=GenBank:WP_003898712.1;Name=WP_003898712.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014741.6;locus_tag=AL60_RS28040;product=DUF222 domain-containing protein;protein_id=WP_003898712.1;transl_table=11 NZ_KK316864.1 RefSeq gene 18738 19919 . + . ID=gene-AL60_RS25130;Name=AL60_RS25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25130;old_locus_tag=AL60_04010 NZ_KK316864.1 Protein Homology CDS 18738 19919 . + 0 ID=cds-WP_003405622.1;Parent=gene-AL60_RS25130;Dbxref=GenBank:WP_003405622.1;Name=WP_003405622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215573.1;locus_tag=AL60_RS25130;product=YncE family protein;protein_id=WP_003405622.1;transl_table=11 NZ_KK316864.1 RefSeq gene 20026 21657 . + . ID=gene-AL60_RS25135;Name=AL60_RS25135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25135;old_locus_tag=AL60_04011 NZ_KK316864.1 Protein Homology CDS 20026 21657 . + 0 ID=cds-WP_003405625.1;Parent=gene-AL60_RS25135;Dbxref=GenBank:WP_003405625.1;Name=WP_003405625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215574.1;locus_tag=AL60_RS25135;product=long-chain fatty acid--CoA ligase;protein_id=WP_003405625.1;transl_table=11 NZ_KK316864.1 RefSeq gene 21733 22797 . + . ID=gene-AL60_RS25140;Name=AL60_RS25140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25140;old_locus_tag=AL60_04012 NZ_KK316864.1 Protein Homology CDS 21733 22797 . + 0 ID=cds-WP_003405629.1;Parent=gene-AL60_RS25140;Dbxref=GenBank:WP_003405629.1;Name=WP_003405629.1;Ontology_term=GO:0016638;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215575.1;locus_tag=AL60_RS25140;product=NAD(P)H-dependent amine dehydrogenase family protein;protein_id=WP_003405629.1;transl_table=11 NZ_KK316864.1 RefSeq gene 22850 23323 . + . ID=gene-AL60_RS25145;Name=AL60_RS25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25145;old_locus_tag=AL60_04013 NZ_KK316864.1 Protein Homology CDS 22850 23323 . + 0 ID=cds-WP_003405633.1;Parent=gene-AL60_RS25145;Dbxref=GenBank:WP_003405633.1;Name=WP_003405633.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215576.1;locus_tag=AL60_RS25145;product=SRPBCC family protein;protein_id=WP_003405633.1;transl_table=11 NZ_KK316864.1 RefSeq gene 23357 24220 . + . ID=gene-AL60_RS25150;Name=AL60_RS25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25150;old_locus_tag=AL60_04014 NZ_KK316864.1 Protein Homology CDS 23357 24220 . + 0 ID=cds-WP_003405636.1;Parent=gene-AL60_RS25150;Dbxref=GenBank:WP_003405636.1;Name=WP_003405636.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215577.1;locus_tag=AL60_RS25150;product=class II glutamine amidotransferase;protein_id=WP_003405636.1;transl_table=11 NZ_KK316864.1 RefSeq gene 24225 25082 . + . ID=gene-AL60_RS25155;Name=AL60_RS25155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25155;old_locus_tag=AL60_04015 NZ_KK316864.1 Protein Homology CDS 24225 25082 . + 0 ID=cds-WP_003405640.1;Parent=gene-AL60_RS25155;Dbxref=GenBank:WP_003405640.1;Name=WP_003405640.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215578.1;locus_tag=AL60_RS25155;product=patatin-like phospholipase family protein;protein_id=WP_003405640.1;transl_table=11 NZ_KK316864.1 RefSeq gene 25083 26165 . - . ID=gene-AL60_RS25160;Name=AL60_RS25160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25160;old_locus_tag=AL60_04016 NZ_KK316864.1 Protein Homology CDS 25083 26165 . - 0 ID=cds-WP_003405642.1;Parent=gene-AL60_RS25160;Dbxref=GenBank:WP_003405642.1;Name=WP_003405642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215579.1;locus_tag=AL60_RS25160;product=patatin family protein;protein_id=WP_003405642.1;transl_table=11 NZ_KK316864.1 RefSeq gene 26246 26665 . - . ID=gene-AL60_RS25165;Name=lpqV;gbkey=Gene;gene=lpqV;gene_biotype=protein_coding;locus_tag=AL60_RS25165;old_locus_tag=AL60_04017 NZ_KK316864.1 Protein Homology CDS 26246 26665 . - 0 ID=cds-WP_003405645.1;Parent=gene-AL60_RS25165;Dbxref=GenBank:WP_003405645.1;Name=WP_003405645.1;gbkey=CDS;gene=lpqV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215580.1;locus_tag=AL60_RS25165;product=lipoprotein LpqV;protein_id=WP_003405645.1;transl_table=11 NZ_KK316864.1 RefSeq gene 26777 27343 . + . ID=gene-AL60_RS25170;Name=AL60_RS25170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25170;old_locus_tag=AL60_04018 NZ_KK316864.1 Protein Homology CDS 26777 27343 . + 0 ID=cds-WP_003405649.1;Parent=gene-AL60_RS25170;Dbxref=GenBank:WP_003405649.1;Name=WP_003405649.1;Ontology_term=GO:0008198,GO:0017172;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,cysteine dioxygenase activity|0017172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215581.1;locus_tag=AL60_RS25170;product=cysteine dioxygenase;protein_id=WP_003405649.1;transl_table=11 NZ_KK316864.1 RefSeq gene 27340 27735 . + . ID=gene-AL60_RS25175;Name=AL60_RS25175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25175;old_locus_tag=AL60_04019 NZ_KK316864.1 Protein Homology CDS 27340 27735 . + 0 ID=cds-WP_003405651.1;Parent=gene-AL60_RS25175;Dbxref=GenBank:WP_003405651.1;Name=WP_003405651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215582.1;locus_tag=AL60_RS25175;product=rhodanese-like domain-containing protein;protein_id=WP_003405651.1;transl_table=11 NZ_KK316864.1 RefSeq gene 27763 29434 . - . ID=gene-AL60_RS25180;Name=AL60_RS25180;end_range=29434,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25180;old_locus_tag=AL60_04020;partial=true NZ_KK316864.1 Protein Homology CDS 27763 29434 . - 1 ID=cds-WP_031674004.1;Parent=gene-AL60_RS25180;Dbxref=GenBank:WP_031674004.1;Name=WP_031674004.1;end_range=29434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177780.1;locus_tag=AL60_RS25180;partial=true;product=PGRS repeat-containing protein;protein_id=WP_031674004.1;transl_table=11 ##sequence-region NZ_KK316865.1 1 24726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316865.1 RefSeq region 1 24726 . + . ID=NZ_KK316865.1:1..24726;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316865.1 RefSeq pseudogene 255 1967 . + . ID=gene-AL60_RS25185;Name=AL60_RS25185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS25185;old_locus_tag=AL60_04021;pseudo=true NZ_KK316865.1 Protein Homology CDS 255 1967 . + 0 ID=cds-AL60_RS25185;Parent=gene-AL60_RS25185;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217844.1;locus_tag=AL60_RS25185;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_KK316865.1 RefSeq gene 1900 2838 . - . ID=gene-AL60_RS25190;Name=sigJ;gbkey=Gene;gene=sigJ;gene_biotype=protein_coding;locus_tag=AL60_RS25190;old_locus_tag=AL60_04022 NZ_KK316865.1 Protein Homology CDS 1900 2838 . - 0 ID=cds-WP_003417413.1;Parent=gene-AL60_RS25190;Dbxref=GenBank:WP_003417413.1;Name=WP_003417413.1;gbkey=CDS;gene=sigJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217845.1;locus_tag=AL60_RS25190;product=sigma-70 family RNA polymerase sigma factor SigJ;protein_id=WP_003417413.1;transl_table=11 NZ_KK316865.1 RefSeq gene 2847 4214 . + . ID=gene-AL60_RS25195;Name=AL60_RS25195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25195;old_locus_tag=AL60_04023 NZ_KK316865.1 Protein Homology CDS 2847 4214 . + 0 ID=cds-WP_003902446.1;Parent=gene-AL60_RS25195;Dbxref=GenBank:WP_003902446.1;Name=WP_003902446.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006329602.1;locus_tag=AL60_RS25195;product=aspartate aminotransferase family protein;protein_id=WP_003902446.1;transl_table=11 NZ_KK316865.1 RefSeq gene 4283 5500 . + . ID=gene-AL60_RS25200;Name=dacB1;gbkey=Gene;gene=dacB1;gene_biotype=protein_coding;locus_tag=AL60_RS25200;old_locus_tag=AL60_04024 NZ_KK316865.1 Protein Homology CDS 4283 5500 . + 0 ID=cds-WP_003417415.1;Parent=gene-AL60_RS25200;Dbxref=GenBank:WP_003417415.1;Name=WP_003417415.1;gbkey=CDS;gene=dacB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217847.1;locus_tag=AL60_RS25200;product=D-alanyl-D-alanine carboxypeptidase DacB1;protein_id=WP_003417415.1;transl_table=11 NZ_KK316865.1 RefSeq gene 5725 7104 . + . ID=gene-AL60_RS25205;Name=sugI;gbkey=Gene;gene=sugI;gene_biotype=protein_coding;locus_tag=AL60_RS25205;old_locus_tag=AL60_04025 NZ_KK316865.1 Protein Homology CDS 5725 7104 . + 0 ID=cds-WP_003912183.1;Parent=gene-AL60_RS25205;Dbxref=GenBank:WP_003912183.1;Name=WP_003912183.1;Ontology_term=GO:0008643,GO:0051119,GO:0016020;gbkey=CDS;gene=sugI;go_component=membrane|0016020||IEA;go_function=sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912183.1;locus_tag=AL60_RS25205;product=sugar porter family MFS transporter;protein_id=WP_003912183.1;transl_table=11 NZ_KK316865.1 RefSeq gene 7101 8252 . + . ID=gene-AL60_RS25210;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AL60_RS25210;old_locus_tag=AL60_04026 NZ_KK316865.1 Protein Homology CDS 7101 8252 . + 0 ID=cds-WP_003417418.1;Parent=gene-AL60_RS25210;Dbxref=GenBank:WP_003417418.1;Name=WP_003417418.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217849.1;locus_tag=AL60_RS25210;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_003417418.1;transl_table=11 NZ_KK316865.1 RefSeq gene 8443 9288 . - . ID=gene-AL60_RS25215;Name=prp1;gbkey=Gene;gene=prp1;gene_biotype=protein_coding;locus_tag=AL60_RS25215;old_locus_tag=AL60_04027 NZ_KK316865.1 Protein Homology CDS 8443 9288 . - 0 ID=cds-WP_003417421.1;Parent=gene-AL60_RS25215;Dbxref=GenBank:WP_003417421.1;Name=WP_003417421.1;gbkey=CDS;gene=prp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217850.1;locus_tag=AL60_RS25215;product=PDZ-interacting protease regulator Ppr1;protein_id=WP_003417421.1;transl_table=11 NZ_KK316865.1 RefSeq gene 9763 10203 . + . ID=gene-AL60_RS25220;Name=AL60_RS25220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25220;old_locus_tag=AL60_04028 NZ_KK316865.1 Protein Homology CDS 9763 10203 . + 0 ID=cds-WP_003900026.1;Parent=gene-AL60_RS25220;Dbxref=GenBank:WP_003900026.1;Name=WP_003900026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217851.1;locus_tag=AL60_RS25220;product=hypoxia response transcriptional regulator;protein_id=WP_003900026.1;transl_table=11 NZ_KK316865.1 RefSeq gene 10237 11106 . - . ID=gene-AL60_RS25225;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=AL60_RS25225;old_locus_tag=AL60_04029 NZ_KK316865.1 Protein Homology CDS 10237 11106 . - 0 ID=cds-WP_012054351.1;Parent=gene-AL60_RS25225;Dbxref=GenBank:WP_012054351.1;Name=WP_012054351.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217852.1;locus_tag=AL60_RS25225;product=inner membrane protein YhjD;protein_id=WP_012054351.1;transl_table=11 NZ_KK316865.1 RefSeq gene 11127 12137 . - . ID=gene-AL60_RS25230;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AL60_RS25230;old_locus_tag=AL60_04030 NZ_KK316865.1 Protein Homology CDS 11127 12137 . - 0 ID=cds-WP_003417440.1;Parent=gene-AL60_RS25230;Dbxref=GenBank:WP_003417440.1;Name=WP_003417440.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217853.1;locus_tag=AL60_RS25230;product=tryptophan--tRNA ligase;protein_id=WP_003417440.1;transl_table=11 NZ_KK316865.1 RefSeq pseudogene 12305 13054 . + . ID=gene-AL60_RS25235;Name=AL60_RS25235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS25235;old_locus_tag=AL60_04032;partial=true;pseudo=true;start_range=.,12305 NZ_KK316865.1 Protein Homology CDS 12305 13054 . + 0 ID=cds-AL60_RS25235;Parent=gene-AL60_RS25235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900674.1;locus_tag=AL60_RS25235;partial=true;product=alpha/beta fold hydrolase;pseudo=true;start_range=.,12305;transl_table=11 NZ_KK316865.1 RefSeq gene 13121 14350 . - . ID=gene-AL60_RS25240;Name=AL60_RS25240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25240;old_locus_tag=AL60_04033 NZ_KK316865.1 Protein Homology CDS 13121 14350 . - 0 ID=cds-WP_003417452.1;Parent=gene-AL60_RS25240;Dbxref=GenBank:WP_003417452.1;Name=WP_003417452.1;Ontology_term=GO:0006102,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=isocitrate metabolic process|0006102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217856.1;locus_tag=AL60_RS25240;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_003417452.1;transl_table=11 NZ_KK316865.1 cmsearch riboswitch 14477 14596 . + . ID=id-NZ_KK316865.1:14477..14596;Dbxref=RFAM:RF00634;Note=SAM riboswitch class IV;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316865.1 RefSeq gene 14633 15982 . + . ID=gene-AL60_RS25245;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AL60_RS25245;old_locus_tag=AL60_04034 NZ_KK316865.1 Protein Homology CDS 14633 15982 . + 0 ID=cds-WP_003900028.1;Parent=gene-AL60_RS25245;Dbxref=GenBank:WP_003900028.1;Name=WP_003900028.1;Ontology_term=GO:0019346,GO:0016765;gbkey=CDS;gene=metC;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217857.1;locus_tag=AL60_RS25245;product=bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase;protein_id=WP_003900028.1;transl_table=11 NZ_KK316865.1 RefSeq gene 15994 17133 . + . ID=gene-AL60_RS25250;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=AL60_RS25250;old_locus_tag=AL60_04035 NZ_KK316865.1 Protein Homology CDS 15994 17133 . + 0 ID=cds-WP_003417458.1;Parent=gene-AL60_RS25250;Dbxref=GenBank:WP_003417458.1;Name=WP_003417458.1;Ontology_term=GO:0009086,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217858.1;locus_tag=AL60_RS25250;product=homoserine O-acetyltransferase MetX;protein_id=WP_003417458.1;transl_table=11 NZ_KK316865.1 RefSeq gene 17130 17861 . + . ID=gene-AL60_RS25255;Name=AL60_RS25255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25255;old_locus_tag=AL60_04036 NZ_KK316865.1 Protein Homology CDS 17130 17861 . + 0 ID=cds-WP_003417461.1;Parent=gene-AL60_RS25255;Dbxref=GenBank:WP_003417461.1;Name=WP_003417461.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217859.1;locus_tag=AL60_RS25255;product=class I SAM-dependent methyltransferase;protein_id=WP_003417461.1;transl_table=11 NZ_KK316865.1 RefSeq gene 17870 24726 . - . ID=gene-AL60_RS25260;Name=AL60_RS25260;end_range=24726,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25260;old_locus_tag=AL60_04037;partial=true NZ_KK316865.1 Protein Homology CDS 17870 24726 . - 2 ID=cds-WP_031721533.1;Parent=gene-AL60_RS25260;Dbxref=GenBank:WP_031721533.1;Name=WP_031721533.1;end_range=24726,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585563.1;locus_tag=AL60_RS25260;partial=true;product=PPE family protein;protein_id=WP_031721533.1;transl_table=11 ##sequence-region NZ_KK316866.1 1 15065 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316866.1 RefSeq region 1 15065 . + . ID=NZ_KK316866.1:1..15065;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316866.1 RefSeq gene 1 1200 . - . ID=gene-AL60_RS25265;Name=AL60_RS25265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25265;old_locus_tag=AL60_04038;partial=true;start_range=.,1 NZ_KK316866.1 Protein Homology CDS 1 1200 . - 0 ID=cds-WP_049955266.1;Parent=gene-AL60_RS25265;Dbxref=GenBank:WP_049955266.1;Name=WP_049955266.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177811.1;locus_tag=AL60_RS25265;partial=true;product=PE family protein;protein_id=WP_049955266.1;start_range=.,1;transl_table=11 NZ_KK316866.1 RefSeq gene 1307 3607 . + . ID=gene-AL60_RS25270;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=AL60_RS25270;old_locus_tag=AL60_04039 NZ_KK316866.1 Protein Homology CDS 1307 3607 . + 0 ID=cds-WP_003407419.1;Parent=gene-AL60_RS25270;Dbxref=GenBank:WP_003407419.1;Name=WP_003407419.1;gbkey=CDS;gene=bisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215958.1;locus_tag=AL60_RS25270;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_003407419.1;transl_table=11 NZ_KK316866.1 RefSeq gene 3723 4187 . - . ID=gene-AL60_RS25275;Name=AL60_RS25275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25275;old_locus_tag=AL60_04040 NZ_KK316866.1 Protein Homology CDS 3723 4187 . - 0 ID=cds-WP_014584749.1;Parent=gene-AL60_RS25275;Dbxref=GenBank:WP_014584749.1;Name=WP_014584749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584749.1;locus_tag=AL60_RS25275;product=SRPBCC family protein;protein_id=WP_014584749.1;transl_table=11 NZ_KK316866.1 RefSeq gene 4284 4523 . + . ID=gene-AL60_RS28045;Name=AL60_RS28045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS28045 NZ_KK316866.1 Protein Homology CDS 4284 4523 . + 0 ID=cds-WP_003407426.1;Parent=gene-AL60_RS28045;Dbxref=GenBank:WP_003407426.1;Name=WP_003407426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015456255.1;locus_tag=AL60_RS28045;product=hypothetical protein;protein_id=WP_003407426.1;transl_table=11 NZ_KK316866.1 RefSeq gene 4803 5213 . - . ID=gene-AL60_RS25280;Name=AL60_RS25280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25280;old_locus_tag=AL60_04041 NZ_KK316866.1 Protein Homology CDS 4803 5213 . - 0 ID=cds-WP_003898881.1;Parent=gene-AL60_RS25280;Dbxref=GenBank:WP_003898881.1;Name=WP_003898881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011739930.1;locus_tag=AL60_RS25280;product=hypothetical protein;protein_id=WP_003898881.1;transl_table=11 NZ_KK316866.1 RefSeq gene 5230 5973 . - . ID=gene-AL60_RS25285;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=AL60_RS25285;old_locus_tag=AL60_04042 NZ_KK316866.1 Protein Homology CDS 5230 5973 . - 0 ID=cds-WP_003407433.1;Parent=gene-AL60_RS25285;Dbxref=GenBank:WP_003407433.1;Name=WP_003407433.1;Ontology_term=GO:0005975,GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=carbohydrate metabolic process|0005975||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215961.1;locus_tag=AL60_RS25285;product=6-phosphogluconolactonase;protein_id=WP_003407433.1;transl_table=11 NZ_KK316866.1 RefSeq gene 5970 6881 . - . ID=gene-AL60_RS25290;Name=opcA;gbkey=Gene;gene=opcA;gene_biotype=protein_coding;locus_tag=AL60_RS25290;old_locus_tag=AL60_04043 NZ_KK316866.1 Protein Homology CDS 5970 6881 . - 0 ID=cds-WP_012054273.1;Parent=gene-AL60_RS25290;Dbxref=GenBank:WP_012054273.1;Name=WP_012054273.1;Ontology_term=GO:0006098,GO:0065003;gbkey=CDS;gene=opcA;go_process=pentose-phosphate shunt|0006098||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215962.1;locus_tag=AL60_RS25290;product=glucose-6-phosphate dehydrogenase assembly protein OpcA;protein_id=WP_012054273.1;transl_table=11 NZ_KK316866.1 RefSeq gene 6934 8478 . - . ID=gene-AL60_RS25295;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=AL60_RS25295;old_locus_tag=AL60_04044 NZ_KK316866.1 Protein Homology CDS 6934 8478 . - 0 ID=cds-WP_003407443.1;Parent=gene-AL60_RS25295;Dbxref=GenBank:WP_003407443.1;Name=WP_003407443.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215963.1;locus_tag=AL60_RS25295;product=glucose-6-phosphate dehydrogenase;protein_id=WP_003407443.1;transl_table=11 NZ_KK316866.1 RefSeq gene 8475 9596 . - . ID=gene-AL60_RS25300;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AL60_RS25300;old_locus_tag=AL60_04045 NZ_KK316866.1 Protein Homology CDS 8475 9596 . - 0 ID=cds-WP_003912809.1;Parent=gene-AL60_RS25300;Dbxref=GenBank:WP_003912809.1;Name=WP_003912809.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215964.1;locus_tag=AL60_RS25300;product=transaldolase;protein_id=WP_003912809.1;transl_table=11 NZ_KK316866.1 RefSeq gene 9613 11715 . - . ID=gene-AL60_RS25305;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AL60_RS25305;old_locus_tag=AL60_04046 NZ_KK316866.1 Protein Homology CDS 9613 11715 . - 0 ID=cds-WP_003407451.1;Parent=gene-AL60_RS25305;Dbxref=GenBank:WP_003407451.1;Name=WP_003407451.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215965.1;locus_tag=AL60_RS25305;product=transketolase;protein_id=WP_003407451.1;transl_table=11 NZ_KK316866.1 RefSeq gene 12154 15065 . - . ID=gene-AL60_RS25310;Name=AL60_RS25310;end_range=15065,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25310;old_locus_tag=AL60_04047;partial=true NZ_KK316866.1 Protein Homology CDS 12154 15065 . - 2 ID=cds-WP_031685271.1;Parent=gene-AL60_RS25310;Dbxref=GenBank:WP_031685271.1;Name=WP_031685271.1;end_range=15065,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177812.1;locus_tag=AL60_RS25310;partial=true;product=hypothetical protein;protein_id=WP_031685271.1;transl_table=11 ##sequence-region NZ_KK316867.1 1 14449 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316867.1 RefSeq region 1 14449 . + . ID=NZ_KK316867.1:1..14449;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316867.1 RefSeq gene 323 1900 . - . ID=gene-AL60_RS0105630;Name=AL60_RS0105630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105630 NZ_KK316867.1 Protein Homology CDS 323 1900 . - 0 ID=cds-WP_003916382.1;Parent=gene-AL60_RS0105630;Dbxref=GenBank:WP_003916382.1;Name=WP_003916382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916028.1;locus_tag=AL60_RS0105630;product=phospholipase C;protein_id=WP_003916382.1;transl_table=11 NZ_KK316867.1 RefSeq gene 1996 3141 . - . ID=gene-AL60_RS25315;Name=AL60_RS25315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25315;old_locus_tag=AL60_04049 NZ_KK316867.1 Protein Homology CDS 1996 3141 . - 0 ID=cds-WP_003899004.1;Parent=gene-AL60_RS25315;Dbxref=GenBank:WP_003899004.1;Name=WP_003899004.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007171006.1;locus_tag=AL60_RS25315;product=glycosyltransferase;protein_id=WP_003899004.1;transl_table=11 NZ_KK316867.1 RefSeq gene 3367 4470 . + . ID=gene-AL60_RS25320;Name=AL60_RS25320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25320;old_locus_tag=AL60_04050 NZ_KK316867.1 Protein Homology CDS 3367 4470 . + 0 ID=cds-WP_003911638.1;Parent=gene-AL60_RS25320;Dbxref=GenBank:WP_003911638.1;Name=WP_003911638.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293176.1;locus_tag=AL60_RS25320;product=sulfite oxidase;protein_id=WP_003911638.1;transl_table=11 NZ_KK316867.1 RefSeq gene 4671 7508 . + . ID=gene-AL60_RS25325;Name=AL60_RS25325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25325;old_locus_tag=AL60_04051 NZ_KK316867.1 Protein Homology CDS 4671 7508 . + 0 ID=cds-WP_003900401.1;Parent=gene-AL60_RS25325;Dbxref=GenBank:WP_003900401.1;Name=WP_003900401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288153.1;locus_tag=AL60_RS25325;product=MMPL/RND family transporter;protein_id=WP_003900401.1;transl_table=11 NZ_KK316867.1 RefSeq pseudogene 7829 8002 . + . ID=gene-AL60_RS26690;Name=cut1;end_range=8002,.;gbkey=Gene;gene=cut1;gene_biotype=pseudogene;locus_tag=AL60_RS26690;old_locus_tag=AL60_04052;partial=true;pseudo=true NZ_KK316867.1 Protein Homology CDS 7829 8002 . + 0 ID=cds-AL60_RS26690;Parent=gene-AL60_RS26690;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=8002,.;gbkey=CDS;gene=cut1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288154.1;locus_tag=AL60_RS26690;partial=true;product=cutinase Cut1;pseudo=true;transl_table=11 NZ_KK316867.1 RefSeq gene 8044 8290 . - . ID=gene-AL60_RS26995;Name=AL60_RS26995;end_range=8290,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS26995;old_locus_tag=AL60_04053;partial=true NZ_KK316867.1 Protein Homology CDS 8044 8290 . - 1 ID=cds-WP_003916150.1;Parent=gene-AL60_RS26995;Dbxref=GenBank:WP_003916150.1;Name=WP_003916150.1;Ontology_term=GO:0015074;end_range=8290,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS26995;partial=true;product=integrase core domain-containing protein;protein_id=WP_003916150.1;transl_table=11 NZ_KK316867.1 RefSeq gene 10066 10287 . - . ID=gene-AL60_RS27000;Name=AL60_RS27000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS27000;old_locus_tag=AL60_04054;partial=true;start_range=.,10066 NZ_KK316867.1 Protein Homology CDS 10066 10287 . - 0 ID=cds-WP_031710016.1;Parent=gene-AL60_RS27000;Dbxref=GenBank:WP_031710016.1;Name=WP_031710016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS27000;partial=true;product=IS3 family transposase;protein_id=WP_031710016.1;start_range=.,10066;transl_table=11 NZ_KK316867.1 RefSeq gene 10857 12263 . + . ID=gene-AL60_RS25335;Name=AL60_RS25335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25335;old_locus_tag=AL60_04055 NZ_KK316867.1 Protein Homology CDS 10857 12263 . + 0 ID=cds-WP_020621419.1;Parent=gene-AL60_RS25335;Dbxref=GenBank:WP_020621419.1;Name=WP_020621419.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911649.1;locus_tag=AL60_RS25335;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_020621419.1;transl_table=11 NZ_KK316867.1 RefSeq gene 12273 12656 . - . ID=gene-AL60_RS25340;Name=AL60_RS25340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25340;old_locus_tag=AL60_04056 NZ_KK316867.1 Protein Homology CDS 12273 12656 . - 0 ID=cds-WP_003899008.1;Parent=gene-AL60_RS25340;Dbxref=GenBank:WP_003899008.1;Name=WP_003899008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216277.1;locus_tag=AL60_RS25340;product=DUF5073 family protein;protein_id=WP_003899008.1;transl_table=11 NZ_KK316867.1 RefSeq gene 12656 13444 . - . ID=gene-AL60_RS25345;Name=AL60_RS25345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25345;old_locus_tag=AL60_04057 NZ_KK316867.1 Protein Homology CDS 12656 13444 . - 0 ID=cds-WP_003899009.1;Parent=gene-AL60_RS25345;Dbxref=GenBank:WP_003899009.1;Name=WP_003899009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216278.1;locus_tag=AL60_RS25345;product=heavy metal-binding domain-containing protein;protein_id=WP_003899009.1;transl_table=11 NZ_KK316867.1 RefSeq gene 13584 14051 . - . ID=gene-AL60_RS25350;Name=AL60_RS25350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25350;old_locus_tag=AL60_04058 NZ_KK316867.1 Protein Homology CDS 13584 14051 . - 0 ID=cds-WP_003899010.1;Parent=gene-AL60_RS25350;Dbxref=GenBank:WP_003899010.1;Name=WP_003899010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899010.1;locus_tag=AL60_RS25350;product=hypothetical protein;protein_id=WP_003899010.1;transl_table=11 ##sequence-region NZ_KK316868.1 1 2831 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316868.1 RefSeq region 1 2831 . + . ID=NZ_KK316868.1:1..2831;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316868.1 RefSeq gene 1 1390 . + . ID=gene-AL60_RS0105645;Name=AL60_RS0105645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105645;partial=true;start_range=.,1 NZ_KK316868.1 Protein Homology CDS 1 1390 . + 1 ID=cds-WP_031710087.1;Parent=gene-AL60_RS0105645;Dbxref=GenBank:WP_031710087.1;Name=WP_031710087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177739.1;locus_tag=AL60_RS0105645;partial=true;product=hypothetical protein;protein_id=WP_031710087.1;start_range=.,1;transl_table=11 NZ_KK316868.1 RefSeq pseudogene 1519 2025 . - . ID=gene-AL60_RS25355;Name=AL60_RS25355;end_range=2025,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS25355;old_locus_tag=AL60_04059;partial=true;pseudo=true NZ_KK316868.1 Protein Homology CDS 1519 2025 . - 0 ID=cds-AL60_RS25355;Parent=gene-AL60_RS25355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2025,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294467.1;locus_tag=AL60_RS25355;partial=true;product=AMP-binding enzyme;pseudo=true;transl_table=11 NZ_KK316868.1 RefSeq gene 2221 2831 . + . ID=gene-AL60_RS0105650;Name=AL60_RS0105650;end_range=2831,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105650;partial=true NZ_KK316868.1 Protein Homology CDS 2221 2831 . + 0 ID=cds-WP_031647921.1;Parent=gene-AL60_RS0105650;Dbxref=GenBank:WP_031647921.1;Name=WP_031647921.1;Ontology_term=GO:0005576,GO:0009986;end_range=2831,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177982.1;locus_tag=AL60_RS0105650;partial=true;product=PE family protein;protein_id=WP_031647921.1;transl_table=11 ##sequence-region NZ_KK316869.1 1 2398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316869.1 RefSeq region 1 2398 . + . ID=NZ_KK316869.1:1..2398;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316869.1 RefSeq gene 1 897 . - . ID=gene-AL60_RS25360;Name=AL60_RS25360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25360;old_locus_tag=AL60_04060;partial=true;start_range=.,1 NZ_KK316869.1 Protein Homology CDS 1 897 . - 0 ID=cds-WP_031721538.1;Parent=gene-AL60_RS25360;Dbxref=GenBank:WP_031721538.1;Name=WP_031721538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177891.1;locus_tag=AL60_RS25360;partial=true;product=hypothetical protein;protein_id=WP_031721538.1;start_range=.,1;transl_table=11 NZ_KK316869.1 RefSeq gene 1055 2398 . - . ID=gene-AL60_RS25365;Name=AL60_RS25365;end_range=2398,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25365;partial=true NZ_KK316869.1 Protein Homology CDS 1055 2398 . - 0 ID=cds-WP_192928790.1;Parent=gene-AL60_RS25365;Dbxref=GenBank:WP_192928790.1;Name=WP_192928790.1;end_range=2398,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177962.1;locus_tag=AL60_RS25365;partial=true;product=hypothetical protein;protein_id=WP_192928790.1;transl_table=11 ##sequence-region NZ_KK316870.1 1 1935 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316870.1 RefSeq region 1 1935 . + . ID=NZ_KK316870.1:1..1935;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316870.1 RefSeq gene 1 779 . - . ID=gene-AL60_RS25370;Name=AL60_RS25370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25370;old_locus_tag=AL60_04061;partial=true;start_range=.,1 NZ_KK316870.1 Protein Homology CDS 1 779 . - 0 ID=cds-WP_016719642.1;Parent=gene-AL60_RS25370;Dbxref=GenBank:WP_016719642.1;Name=WP_016719642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216461.1;locus_tag=AL60_RS25370;partial=true;product=DUF222 domain-containing protein;protein_id=WP_016719642.1;start_range=.,1;transl_table=11 NZ_KK316870.1 RefSeq pseudogene 1008 1935 . + . ID=gene-AL60_RS26700;Name=AL60_RS26700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS26700;old_locus_tag=AL60_04062;pseudo=true NZ_KK316870.1 Protein Homology CDS 1008 1935 . + 0 ID=cds-AL60_RS26700;Parent=gene-AL60_RS26700;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612358.1;locus_tag=AL60_RS26700;product=IS5-like element ISMt1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_KK316871.1 1 1638 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316871.1 RefSeq region 1 1638 . + . ID=NZ_KK316871.1:1..1638;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316871.1 RefSeq pseudogene 1 1638 . - . ID=gene-AL60_RS0105685;Name=AL60_RS0105685;end_range=1638,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0105685;partial=true;pseudo=true;start_range=.,1 NZ_KK316871.1 Protein Homology CDS 1 1638 . - 1 ID=cds-AL60_RS0105685;Parent=gene-AL60_RS0105685;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1638,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177707.1;locus_tag=AL60_RS0105685;partial=true;product=PE family protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_KK316872.1 1 1510 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316872.1 RefSeq region 1 1510 . + . ID=NZ_KK316872.1:1..1510;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316872.1 RefSeq gene 112 1373 . + . ID=gene-AL60_RS25380;Name=AL60_RS25380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25380;old_locus_tag=AL60_04064 NZ_KK316872.1 Protein Homology CDS 112 400 . + 0 ID=cds-WP_087902221.1;Parent=gene-AL60_RS25380;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS25380;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316872.1 Protein Homology CDS 400 1373 . + 2 ID=cds-WP_087902221.1;Parent=gene-AL60_RS25380;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS25380;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316872.1 RefSeq pseudogene 1395 1510 . + . ID=gene-AL60_RS27795;Name=AL60_RS27795;end_range=1510,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27795;partial=true;pseudo=true;start_range=.,1395 NZ_KK316872.1 Protein Homology CDS 1395 1510 . + 0 ID=cds-AL60_RS27795;Parent=gene-AL60_RS27795;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1510,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216531.1;locus_tag=AL60_RS27795;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1395;transl_table=11 ##sequence-region NZ_KK316873.1 1 1506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316873.1 RefSeq region 1 1506 . + . ID=NZ_KK316873.1:1..1506;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316873.1 RefSeq gene 1 1506 . + . ID=gene-AL60_RS25385;Name=AL60_RS25385;end_range=1506,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25385;old_locus_tag=AL60_04065;partial=true;start_range=.,1 NZ_KK316873.1 Protein Homology CDS 1 1506 . + 2 ID=cds-WP_031721540.1;Parent=gene-AL60_RS25385;Dbxref=GenBank:WP_031721540.1;Name=WP_031721540.1;end_range=1506,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177786.1;locus_tag=AL60_RS25385;partial=true;product=hypothetical protein;protein_id=WP_031721540.1;start_range=.,1;transl_table=11 ##sequence-region NZ_KK316874.1 1 1481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316874.1 RefSeq region 1 1481 . + . ID=NZ_KK316874.1:1..1481;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316874.1 RefSeq gene 1 1010 . - . ID=gene-AL60_RS0105690;Name=AL60_RS0105690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS0105690;partial=true;start_range=.,1 NZ_KK316874.1 Protein Homology CDS 1 1010 . - 0 ID=cds-WP_141769765.1;Parent=gene-AL60_RS0105690;Dbxref=GenBank:WP_141769765.1;Name=WP_141769765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177960.1;locus_tag=AL60_RS0105690;partial=true;product=PPE family protein;protein_id=WP_141769765.1;start_range=.,1;transl_table=11 NZ_KK316874.1 RefSeq pseudogene 1059 1481 . - . ID=gene-AL60_RS0105695;Name=AL60_RS0105695;end_range=1481,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS0105695;partial=true;pseudo=true NZ_KK316874.1 Protein Homology CDS 1059 1481 . - 0 ID=cds-AL60_RS0105695;Parent=gene-AL60_RS0105695;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1481,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177909.1;locus_tag=AL60_RS0105695;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_KK316875.1 1 1452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316875.1 RefSeq region 1 1452 . + . ID=NZ_KK316875.1:1..1452;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316875.1 RefSeq gene 56 1317 . + . ID=gene-AL60_RS25395;Name=AL60_RS25395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL60_RS25395;old_locus_tag=AL60_04067 NZ_KK316875.1 Protein Homology CDS 56 344 . + 0 ID=cds-WP_087902221.1-2;Parent=gene-AL60_RS25395;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS25395;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316875.1 Protein Homology CDS 344 1317 . + 2 ID=cds-WP_087902221.1-2;Parent=gene-AL60_RS25395;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS25395;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316875.1 RefSeq pseudogene 1358 1452 . - . ID=gene-AL60_RS27800;Name=AL60_RS27800;end_range=1452,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27800;old_locus_tag=AL60_04068;partial=true;pseudo=true;start_range=.,1358 NZ_KK316875.1 Protein Homology CDS 1358 1452 . - 2 ID=cds-AL60_RS27800;Parent=gene-AL60_RS27800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215835.1;locus_tag=AL60_RS27800;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1358;transl_table=11 ##sequence-region NZ_KK316876.1 1 1105 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448439 NZ_KK316876.1 RefSeq region 1 1105 . + . ID=NZ_KK316876.1:1..1105;Dbxref=taxon:1448439;collection-date=2013-04-17;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0105 NZ_KK316876.1 RefSeq pseudogene 1 93 . - . ID=gene-AL60_RS27805;Name=AL60_RS27805;end_range=93,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27805;old_locus_tag=AL60_04069;partial=true;pseudo=true;start_range=.,1 NZ_KK316876.1 Protein Homology CDS 1 93 . - 0 ID=cds-AL60_RS27805;Parent=gene-AL60_RS27805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=93,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215835.1;locus_tag=AL60_RS27805;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_KK316876.1 RefSeq pseudogene 147 1105 . + . ID=gene-AL60_RS27010;Name=AL60_RS27010;end_range=1105,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL60_RS27010;partial=true;pseudo=true NZ_KK316876.1 Protein Homology CDS 147 1105 . + 0 ID=cds-AL60_RS27010;Parent=gene-AL60_RS27010;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1105,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL60_RS27010;partial=true;product=IS3-like element IS6110/IS987 family transposase;pseudo=true;transl_table=11 ###