##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM206655v1 #!genome-build-accession NCBI_Assembly:GCF_002066555.1 #!annotation-date 08/11/2025 09:43:46 #!annotation-source NCBI RefSeq GCF_002066555.1-RS_2025_08_11 ##sequence-region NZ_MYDG01000010.1 1 174145 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000010.1 RefSeq region 1 174145 . + . ID=NZ_MYDG01000010.1:1..174145;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000010.1 RefSeq gene 1 825 . - . ID=gene-SO06_RS14320;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=SO06_RS14320;partial=true;start_range=.,1 NZ_MYDG01000010.1 Protein Homology CDS 1 825 . - 0 ID=cds-WP_080204261.1;Parent=gene-SO06_RS14320;Dbxref=GenBank:WP_080204261.1;Name=WP_080204261.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=SO06_RS14320;partial=true;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_080204261.1;start_range=.,1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 844 2205 . - . ID=gene-SO06_RS14325;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=SO06_RS14325 NZ_MYDG01000010.1 Protein Homology CDS 844 2205 . - 0 ID=cds-WP_000769990.1;Parent=gene-SO06_RS14325;Dbxref=GenBank:WP_000769990.1;Name=WP_000769990.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=SO06_RS14325;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769990.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 2217 3620 . - . ID=gene-SO06_RS14330;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=SO06_RS14330 NZ_MYDG01000010.1 Protein Homology CDS 2217 3620 . - 0 ID=cds-WP_001097526.1;Parent=gene-SO06_RS14330;Dbxref=GenBank:WP_001097526.1;Name=WP_001097526.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=SO06_RS14330;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097526.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 3617 4843 . - . ID=gene-SO06_RS14335;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=SO06_RS14335 NZ_MYDG01000010.1 Protein Homology CDS 3617 4843 . - 0 ID=cds-WP_000512359.1;Parent=gene-SO06_RS14335;Dbxref=GenBank:WP_000512359.1;Name=WP_000512359.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=SO06_RS14335;product=ethanolamine utilization protein EutH;protein_id=WP_000512359.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 4963 6150 . - . ID=gene-SO06_RS14340;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=SO06_RS14340 NZ_MYDG01000010.1 Protein Homology CDS 4963 6150 . - 0 ID=cds-WP_001147500.1;Parent=gene-SO06_RS14340;Dbxref=GenBank:WP_001147500.1;Name=WP_001147500.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=SO06_RS14340;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147500.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 6140 6979 . - . ID=gene-SO06_RS14345;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=SO06_RS14345 NZ_MYDG01000010.1 Protein Homology CDS 6140 6979 . - 0 ID=cds-WP_000929675.1;Parent=gene-SO06_RS14345;Dbxref=GenBank:WP_000929675.1;Name=WP_000929675.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=SO06_RS14345;product=ethanolamine utilization protein EutJ;protein_id=WP_000929675.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 6990 8393 . - . ID=gene-SO06_RS14350;Name=SO06_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14350 NZ_MYDG01000010.1 Protein Homology CDS 6990 8393 . - 0 ID=cds-WP_001075638.1;Parent=gene-SO06_RS14350;Dbxref=GenBank:WP_001075638.1;Name=WP_001075638.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=SO06_RS14350;product=aldehyde dehydrogenase family protein;protein_id=WP_001075638.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 8405 8692 . - . ID=gene-SO06_RS14355;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=SO06_RS14355 NZ_MYDG01000010.1 Protein Homology CDS 8405 8692 . - 0 ID=cds-WP_001522340.1;Parent=gene-SO06_RS14355;Dbxref=GenBank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=SO06_RS14355;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 8805 9095 . - . ID=gene-SO06_RS14360;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=SO06_RS14360 NZ_MYDG01000010.1 Protein Homology CDS 8805 9095 . - 0 ID=cds-WP_000387716.1;Parent=gene-SO06_RS14360;Dbxref=GenBank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=SO06_RS14360;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 9136 10152 . - . ID=gene-SO06_RS14365;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=SO06_RS14365 NZ_MYDG01000010.1 Protein Homology CDS 9136 10152 . - 0 ID=cds-WP_000582925.1;Parent=gene-SO06_RS14365;Dbxref=GenBank:WP_000582925.1;Name=WP_000582925.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=SO06_RS14365;product=phosphate acetyltransferase;protein_id=WP_000582925.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 10149 10952 . - . ID=gene-SO06_RS14370;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=SO06_RS14370 NZ_MYDG01000010.1 Protein Homology CDS 10149 10952 . - 0 ID=cds-WP_023138802.1;Parent=gene-SO06_RS14370;Dbxref=GenBank:WP_023138802.1;Name=WP_023138802.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=SO06_RS14370;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_023138802.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 10949 11638 . - . ID=gene-SO06_RS14375;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=SO06_RS14375 NZ_MYDG01000010.1 Protein Homology CDS 10949 11638 . - 0 ID=cds-WP_000733864.1;Parent=gene-SO06_RS14375;Dbxref=GenBank:WP_000733864.1;Name=WP_000733864.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=SO06_RS14375;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733864.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 11616 12095 . - . ID=gene-SO06_RS14380;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=SO06_RS14380 NZ_MYDG01000010.1 Protein Homology CDS 11616 12095 . - 0 ID=cds-WP_000820751.1;Parent=gene-SO06_RS14380;Dbxref=GenBank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=SO06_RS14380;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 12108 12443 . - . ID=gene-SO06_RS14385;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=SO06_RS14385 NZ_MYDG01000010.1 Protein Homology CDS 12108 12443 . - 0 ID=cds-WP_001031445.1;Parent=gene-SO06_RS14385;Dbxref=GenBank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=SO06_RS14385;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 12860 15139 . - . ID=gene-SO06_RS14390;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=SO06_RS14390 NZ_MYDG01000010.1 Protein Homology CDS 12860 15139 . - 0 ID=cds-WP_000344299.1;Parent=gene-SO06_RS14390;Dbxref=GenBank:WP_000344299.1;Name=WP_000344299.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=SO06_RS14390;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000344299.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 15411 16361 . + . ID=gene-SO06_RS14400;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=SO06_RS14400 NZ_MYDG01000010.1 Protein Homology CDS 15411 16361 . + 0 ID=cds-WP_023181777.1;Parent=gene-SO06_RS14400;Dbxref=GenBank:WP_023181777.1;Name=WP_023181777.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=SO06_RS14400;product=transaldolase;protein_id=WP_023181777.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 16381 18381 . + . ID=gene-SO06_RS14405;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=SO06_RS14405 NZ_MYDG01000010.1 Protein Homology CDS 16381 18381 . + 0 ID=cds-WP_000087326.1;Parent=gene-SO06_RS14405;Dbxref=GenBank:WP_000087326.1;Name=WP_000087326.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=SO06_RS14405;product=transketolase;protein_id=WP_000087326.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 18444 18674 . - . ID=gene-SO06_RS14410;Name=SO06_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14410 NZ_MYDG01000010.1 Protein Homology CDS 18444 18674 . - 0 ID=cds-WP_000700635.1;Parent=gene-SO06_RS14410;Dbxref=GenBank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=SO06_RS14410;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 18802 19845 . - . ID=gene-SO06_RS14415;Name=SO06_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14415 NZ_MYDG01000010.1 Protein Homology CDS 18802 19845 . - 0 ID=cds-WP_001270668.1;Parent=gene-SO06_RS14415;Dbxref=GenBank:WP_001270668.1;Name=WP_001270668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=SO06_RS14415;product=DUF1176 domain-containing protein;protein_id=WP_001270668.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 19970 20545 . - . ID=gene-SO06_RS14420;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=SO06_RS14420 NZ_MYDG01000010.1 Protein Homology CDS 19970 20545 . - 0 ID=cds-WP_000084033.1;Parent=gene-SO06_RS14420;Dbxref=GenBank:WP_000084033.1;Name=WP_000084033.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=SO06_RS14420;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000084033.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 20749 22047 . + . ID=gene-SO06_RS14425;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=SO06_RS14425 NZ_MYDG01000010.1 Protein Homology CDS 20749 22047 . + 0 ID=cds-WP_001728185.1;Parent=gene-SO06_RS14425;Dbxref=GenBank:WP_001728185.1;Name=WP_001728185.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=SO06_RS14425;product=penicillin binding protein PBP4B;protein_id=WP_001728185.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 22496 24457 . - . ID=gene-SO06_RS14430;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=SO06_RS14430 NZ_MYDG01000010.1 Protein Homology CDS 22496 24457 . - 0 ID=cds-WP_080204251.1;Parent=gene-SO06_RS14430;Dbxref=GenBank:WP_080204251.1;Name=WP_080204251.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=SO06_RS14430;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_080204251.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 24643 26343 . + . ID=gene-SO06_RS14435;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=SO06_RS14435 NZ_MYDG01000010.1 Protein Homology CDS 24643 26343 . + 0 ID=cds-WP_000216814.1;Parent=gene-SO06_RS14435;Dbxref=GenBank:WP_000216814.1;Name=WP_000216814.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=SO06_RS14435;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_000216814.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 26528 29641 . + . ID=gene-SO06_RS14440;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=SO06_RS14440 NZ_MYDG01000010.1 Protein Homology CDS 26528 29641 . + 0 ID=cds-WP_048348771.1;Parent=gene-SO06_RS14440;Dbxref=GenBank:WP_048348771.1;Name=WP_048348771.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=SO06_RS14440;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_048348771.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 29743 29802 . - . ID=gene-SO06_RS25065;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=SO06_RS25065 NZ_MYDG01000010.1 Protein Homology CDS 29743 29802 . - 0 ID=cds-WP_001386977.1;Parent=gene-SO06_RS25065;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=SO06_RS25065;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 30215 30571 . + . ID=gene-SO06_RS14445;Name=SO06_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14445 NZ_MYDG01000010.1 Protein Homology CDS 30215 30571 . + 0 ID=cds-WP_000631923.1;Parent=gene-SO06_RS14445;Dbxref=GenBank:WP_000631923.1;Name=WP_000631923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=SO06_RS14445;product=ArsC family reductase;protein_id=WP_000631923.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 30575 31702 . + . ID=gene-SO06_RS14450;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=SO06_RS14450 NZ_MYDG01000010.1 Protein Homology CDS 30575 31702 . + 0 ID=cds-WP_001277822.1;Parent=gene-SO06_RS14450;Dbxref=GenBank:WP_001277822.1;Name=WP_001277822.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=SO06_RS14450;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277822.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 31730 31930 . + . ID=gene-SO06_RS14455;Name=SO06_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14455 NZ_MYDG01000010.1 Protein Homology CDS 31730 31930 . + 0 ID=cds-WP_000383839.1;Parent=gene-SO06_RS14455;Dbxref=GenBank:WP_000383839.1;Name=WP_000383839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=SO06_RS14455;product=YpfN family protein;protein_id=WP_000383839.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 31957 33975 . - . ID=gene-SO06_RS14460;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=SO06_RS14460 NZ_MYDG01000010.1 Protein Homology CDS 31957 33975 . - 0 ID=cds-WP_080204252.1;Parent=gene-SO06_RS14460;Dbxref=GenBank:WP_080204252.1;Name=WP_080204252.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=SO06_RS14460;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_080204252.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 33991 34854 . - . ID=gene-SO06_RS14465;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=SO06_RS14465 NZ_MYDG01000010.1 Protein Homology CDS 33991 34854 . - 0 ID=cds-WP_001267523.1;Parent=gene-SO06_RS14465;Dbxref=GenBank:WP_001267523.1;Name=WP_001267523.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=SO06_RS14465;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267523.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 34985 35698 . - . ID=gene-SO06_RS14470;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=SO06_RS14470 NZ_MYDG01000010.1 Protein Homology CDS 34985 35698 . - 0 ID=cds-WP_001171630.1;Parent=gene-SO06_RS14470;Dbxref=GenBank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=SO06_RS14470;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 35873 36907 . - . ID=gene-SO06_RS14475;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=SO06_RS14475 NZ_MYDG01000010.1 Protein Homology CDS 35873 36907 . - 0 ID=cds-WP_000331877.1;Parent=gene-SO06_RS14475;Dbxref=GenBank:WP_000331877.1;Name=WP_000331877.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=SO06_RS14475;product=outer membrane protein assembly factor BamC;protein_id=WP_000331877.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 36924 37802 . - . ID=gene-SO06_RS14480;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=SO06_RS14480 NZ_MYDG01000010.1 Protein Homology CDS 36924 37802 . - 0 ID=cds-WP_000494019.1;Parent=gene-SO06_RS14480;Dbxref=GenBank:WP_000494019.1;Name=WP_000494019.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=SO06_RS14480;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_000494019.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 37948 38520 . + . ID=gene-SO06_RS14485;Name=SO06_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14485 NZ_MYDG01000010.1 Protein Homology CDS 37948 38520 . + 0 ID=cds-WP_000189061.1;Parent=gene-SO06_RS14485;Dbxref=GenBank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=SO06_RS14485;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 38520 38990 . + . ID=gene-SO06_RS14490;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=SO06_RS14490 NZ_MYDG01000010.1 Protein Homology CDS 38520 38990 . + 0 ID=cds-WP_001068686.1;Parent=gene-SO06_RS14490;Dbxref=GenBank:WP_001068686.1;Name=WP_001068686.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=SO06_RS14490;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11 NZ_MYDG01000010.1 RefSeq pseudogene 39040 39360 . - . ID=gene-SO06_RS14495;Name=SO06_RS14495;end_range=39360,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS14495;partial=true;pseudo=true;start_range=.,39040 NZ_MYDG01000010.1 Protein Homology CDS 39040 39360 . - 0 ID=cds-SO06_RS14495;Parent=gene-SO06_RS14495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0031388,GO:0008887;end_range=39360,.;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=SO06_RS14495;partial=true;product=glycerate kinase;pseudo=true;start_range=.,39040;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 39576 40643 . - . ID=gene-SO06_RS14500;Name=SO06_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14500 NZ_MYDG01000010.1 Protein Homology CDS 39576 40643 . - 0 ID=cds-WP_000892056.1;Parent=gene-SO06_RS14500;Dbxref=GenBank:WP_000892056.1;Name=WP_000892056.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=SO06_RS14500;product=AI-2E family transporter;protein_id=WP_000892056.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 40851 42314 . + . ID=gene-SO06_RS14505;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=SO06_RS14505 NZ_MYDG01000010.1 Protein Homology CDS 40851 42314 . + 0 ID=cds-WP_000489631.1;Parent=gene-SO06_RS14505;Dbxref=GenBank:WP_000489631.1;Name=WP_000489631.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=SO06_RS14505;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489631.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 42354 42713 . + . ID=gene-SO06_RS14510;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=SO06_RS14510 NZ_MYDG01000010.1 Protein Homology CDS 42354 42713 . + 0 ID=cds-WP_000132650.1;Parent=gene-SO06_RS14510;Dbxref=GenBank:WP_000132650.1;Name=WP_000132650.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=SO06_RS14510;product=arsenate reductase (glutaredoxin);protein_id=WP_000132650.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 42740 43441 . - . ID=gene-SO06_RS14515;Name=SO06_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14515 NZ_MYDG01000010.1 Protein Homology CDS 42740 43441 . - 0 ID=cds-WP_061835882.1;Parent=gene-SO06_RS14515;Dbxref=GenBank:WP_061835882.1;Name=WP_061835882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=SO06_RS14515;product=DnaA inactivator Hda;protein_id=WP_061835882.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 43536 44825 . - . ID=gene-SO06_RS14520;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=SO06_RS14520 NZ_MYDG01000010.1 Protein Homology CDS 43536 44825 . - 0 ID=cds-WP_000198346.1;Parent=gene-SO06_RS14520;Dbxref=GenBank:WP_000198346.1;Name=WP_000198346.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=SO06_RS14520;product=uracil permease;protein_id=WP_000198346.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 44913 45539 . - . ID=gene-SO06_RS14525;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=SO06_RS14525 NZ_MYDG01000010.1 Protein Homology CDS 44913 45539 . - 0 ID=cds-WP_000706208.1;Parent=gene-SO06_RS14525;Dbxref=GenBank:WP_000706208.1;Name=WP_000706208.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=SO06_RS14525;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 45953 46990 . + . ID=gene-SO06_RS14530;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=SO06_RS14530 NZ_MYDG01000010.1 Protein Homology CDS 45953 46990 . + 0 ID=cds-WP_080204262.1;Parent=gene-SO06_RS14530;Dbxref=GenBank:WP_080204262.1;Name=WP_080204262.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=SO06_RS14530;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_080204262.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 46990 47628 . + . ID=gene-SO06_RS14535;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=SO06_RS14535 NZ_MYDG01000010.1 Protein Homology CDS 46990 47628 . + 0 ID=cds-WP_080204254.1;Parent=gene-SO06_RS14535;Dbxref=GenBank:WP_080204254.1;Name=WP_080204254.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=SO06_RS14535;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_080204254.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 47817 49883 . + . ID=gene-SO06_RS14540;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=SO06_RS14540 NZ_MYDG01000010.1 Protein Homology CDS 47817 49883 . + 0 ID=cds-WP_000529555.1;Parent=gene-SO06_RS14540;Dbxref=GenBank:WP_000529555.1;Name=WP_000529555.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=SO06_RS14540;product=polyphosphate kinase 1;protein_id=WP_000529555.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 49888 51429 . + . ID=gene-SO06_RS14545;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=SO06_RS14545 NZ_MYDG01000010.1 Protein Homology CDS 49888 51429 . + 0 ID=cds-WP_001123330.1;Parent=gene-SO06_RS14545;Dbxref=GenBank:WP_001123330.1;Name=WP_001123330.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=SO06_RS14545;product=exopolyphosphatase;protein_id=WP_001123330.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 51465 53678 . - . ID=gene-SO06_RS14550;Name=SO06_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14550 NZ_MYDG01000010.1 Protein Homology CDS 51465 53678 . - 0 ID=cds-WP_000773648.1;Parent=gene-SO06_RS14550;Dbxref=GenBank:WP_000773648.1;Name=WP_000773648.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=SO06_RS14550;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000773648.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 53775 53912 . - . ID=gene-SO06_RS14555;Name=SO06_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14555 NZ_MYDG01000010.1 Protein Homology CDS 53775 53912 . - 0 ID=cds-WP_001540598.1;Parent=gene-SO06_RS14555;Dbxref=GenBank:WP_001540598.1;Name=WP_001540598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=SO06_RS14555;product=hypothetical protein;protein_id=WP_001540598.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 54091 54282 . + . ID=gene-SO06_RS14560;Name=SO06_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14560 NZ_MYDG01000010.1 Protein Homology CDS 54091 54282 . + 0 ID=cds-WP_000075924.1;Parent=gene-SO06_RS14560;Dbxref=GenBank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=SO06_RS14560;product=YfgG family protein;protein_id=WP_000075924.1;transl_table=11 NZ_MYDG01000010.1 RefSeq pseudogene 54361 54504 . - . ID=gene-SO06_RS25580;Name=SO06_RS25580;end_range=54504,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25580;partial=true;pseudo=true NZ_MYDG01000010.1 Protein Homology CDS 54361 54504 . - 0 ID=cds-SO06_RS25580;Parent=gene-SO06_RS25580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=54504,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=SO06_RS25580;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000010.1 RefSeq pseudogene 54763 54984 . + . ID=gene-SO06_RS14570;Name=SO06_RS14570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS14570;partial=true;pseudo=true;start_range=.,54763 NZ_MYDG01000010.1 Protein Homology CDS 54763 54984 . + 0 ID=cds-SO06_RS14570;Parent=gene-SO06_RS14570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_125368327.1;locus_tag=SO06_RS14570;partial=true;product=STM2901 family protein;pseudo=true;start_range=.,54763;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 54969 55298 . + . ID=gene-SO06_RS14575;Name=SO06_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14575 NZ_MYDG01000010.1 Protein Homology CDS 54969 55298 . + 0 ID=cds-WP_023994424.1;Parent=gene-SO06_RS14575;Dbxref=GenBank:WP_023994424.1;Name=WP_023994424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=SO06_RS14575;product=DUF1493 family protein;protein_id=WP_023994424.1;transl_table=11 NZ_MYDG01000010.1 RefSeq pseudogene 55375 55694 . - . ID=gene-SO06_RS14580;Name=SO06_RS14580;end_range=55694,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS14580;partial=true;pseudo=true;start_range=.,55375 NZ_MYDG01000010.1 Protein Homology CDS 55375 55694 . - 0 ID=cds-SO06_RS14580;Parent=gene-SO06_RS14580;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=55694,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611342.1;locus_tag=SO06_RS14580;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,55375;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 55830 57407 . - . ID=gene-SO06_RS14585;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=SO06_RS14585 NZ_MYDG01000010.1 Protein Homology CDS 55830 57407 . - 0 ID=cds-WP_000138296.1;Parent=gene-SO06_RS14585;Dbxref=GenBank:WP_000138296.1;Name=WP_000138296.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=SO06_RS14585;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138296.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 57477 58943 . - . ID=gene-SO06_RS14590;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=SO06_RS14590 NZ_MYDG01000010.1 Protein Homology CDS 57477 58943 . - 0 ID=cds-WP_000944174.1;Parent=gene-SO06_RS14590;Dbxref=GenBank:WP_000944174.1;Name=WP_000944174.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=SO06_RS14590;product=IMP dehydrogenase;protein_id=WP_000944174.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 59104 60453 . + . ID=gene-SO06_RS14595;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=SO06_RS14595 NZ_MYDG01000010.1 Protein Homology CDS 59104 60453 . + 0 ID=cds-WP_000953168.1;Parent=gene-SO06_RS14595;Dbxref=GenBank:WP_000953168.1;Name=WP_000953168.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=SO06_RS14595;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000953168.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 60615 66596 . - . ID=gene-SO06_RS14600;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=SO06_RS14600 NZ_MYDG01000010.1 Protein Homology CDS 60615 66596 . - 0 ID=cds-WP_080204256.1;Parent=gene-SO06_RS14600;Dbxref=GenBank:WP_080204256.1;Name=WP_080204256.1;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=SO06_RS14600;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=WP_080204256.1;transl_table=11 NZ_MYDG01000010.1 RefSeq pseudogene 67255 67473 . - . ID=gene-SO06_RS14605;Name=SO06_RS14605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS14605;partial=true;pseudo=true;start_range=.,67255 NZ_MYDG01000010.1 Protein Homology CDS 67255 67473 . - 0 ID=cds-SO06_RS14605;Parent=gene-SO06_RS14605;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=SO06_RS14605;partial=true;product=hypothetical protein;pseudo=true;start_range=.,67255;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 67632 73232 . - . ID=gene-SO06_RS14610;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=SO06_RS14610 NZ_MYDG01000010.1 Protein Homology CDS 67632 73232 . - 0 ID=cds-WP_072065490.1;Parent=gene-SO06_RS14610;Dbxref=GenBank:WP_072065490.1;Name=WP_072065490.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=SO06_RS14610;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WP_072065490.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 73352 74320 . - . ID=gene-SO06_RS14615;Name=SO06_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14615 NZ_MYDG01000010.1 Protein Homology CDS 73352 74320 . - 0 ID=cds-WP_023231847.1;Parent=gene-SO06_RS14615;Dbxref=GenBank:WP_023231847.1;Name=WP_023231847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=SO06_RS14615;product=SinI family autotransporter-associated protein;protein_id=WP_023231847.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 74378 76570 . - . ID=gene-SO06_RS14620;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=SO06_RS14620 NZ_MYDG01000010.1 Protein Homology CDS 74378 76570 . - 0 ID=cds-WP_023231848.1;Parent=gene-SO06_RS14620;Dbxref=GenBank:WP_023231848.1;Name=WP_023231848.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=SO06_RS14620;product=intimin-like inverse autotransporter SinH;protein_id=WP_023231848.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 76916 77137 . - . ID=gene-SO06_RS14625;Name=SO06_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14625 NZ_MYDG01000010.1 Protein Homology CDS 76916 77137 . - 0 ID=cds-WP_000406466.1;Parent=gene-SO06_RS14625;Dbxref=GenBank:WP_000406466.1;Name=WP_000406466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=SO06_RS14625;product=zinc ribbon domain-containing protein;protein_id=WP_000406466.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 77226 78698 . - . ID=gene-SO06_RS14630;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=SO06_RS14630 NZ_MYDG01000010.1 Protein Homology CDS 77226 78698 . - 0 ID=cds-WP_000249411.1;Parent=gene-SO06_RS14630;Dbxref=GenBank:WP_000249411.1;Name=WP_000249411.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=SO06_RS14630;product=ribosome biogenesis GTPase Der;protein_id=WP_000249411.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 78815 79993 . - . ID=gene-SO06_RS14635;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=SO06_RS14635 NZ_MYDG01000010.1 Protein Homology CDS 78815 79993 . - 0 ID=cds-WP_001177072.1;Parent=gene-SO06_RS14635;Dbxref=GenBank:WP_001177072.1;Name=WP_001177072.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=SO06_RS14635;product=outer membrane protein assembly factor BamB;protein_id=WP_001177072.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 80004 80624 . - . ID=gene-SO06_RS14640;Name=SO06_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14640 NZ_MYDG01000010.1 Protein Homology CDS 80004 80624 . - 0 ID=cds-WP_000409190.1;Parent=gene-SO06_RS14640;Dbxref=GenBank:WP_000409190.1;Name=WP_000409190.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=SO06_RS14640;product=YfgM family protein;protein_id=WP_000409190.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 80638 81912 . - . ID=gene-SO06_RS14645;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=SO06_RS14645 NZ_MYDG01000010.1 Protein Homology CDS 80638 81912 . - 0 ID=cds-WP_001107139.1;Parent=gene-SO06_RS14645;Dbxref=GenBank:WP_001107139.1;Name=WP_001107139.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=SO06_RS14645;product=histidine--tRNA ligase;protein_id=WP_001107139.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 82023 83141 . - . ID=gene-SO06_RS14650;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=SO06_RS14650 NZ_MYDG01000010.1 Protein Homology CDS 82023 83141 . - 0 ID=cds-WP_000551804.1;Parent=gene-SO06_RS14650;Dbxref=GenBank:WP_000551804.1;Name=WP_000551804.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=SO06_RS14650;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551804.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 83168 84172 . - . ID=gene-SO06_RS14655;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=SO06_RS14655 NZ_MYDG01000010.1 Protein Homology CDS 83168 84172 . - 0 ID=cds-WP_023231849.1;Parent=gene-SO06_RS14655;Dbxref=GenBank:WP_023231849.1;Name=WP_023231849.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=SO06_RS14655;product=cytoskeleton protein RodZ;protein_id=WP_023231849.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 84464 85630 . - . ID=gene-SO06_RS14665;Name=SO06_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14665 NZ_MYDG01000010.1 Protein Homology CDS 84464 85630 . - 0 ID=cds-WP_000003206.1;Parent=gene-SO06_RS14665;Dbxref=GenBank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=SO06_RS14665;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 85837 86268 . - . ID=gene-SO06_RS14670;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=SO06_RS14670 NZ_MYDG01000010.1 Protein Homology CDS 85837 86268 . - 0 ID=cds-WP_023231850.1;Parent=gene-SO06_RS14670;Dbxref=GenBank:WP_023231850.1;Name=WP_023231850.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=SO06_RS14670;product=nucleoside-diphosphate kinase;protein_id=WP_023231850.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 86389 87252 . - . ID=gene-SO06_RS14675;Name=SO06_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14675 NZ_MYDG01000010.1 Protein Homology CDS 86389 87252 . - 0 ID=cds-WP_048348787.1;Parent=gene-SO06_RS14675;Dbxref=GenBank:WP_048348787.1;Name=WP_048348787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=SO06_RS14675;product=4Fe-4S binding protein;protein_id=WP_048348787.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 87252 88061 . - . ID=gene-SO06_RS14680;Name=SO06_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14680 NZ_MYDG01000010.1 Protein Homology CDS 87252 88061 . - 0 ID=cds-WP_020899084.1;Parent=gene-SO06_RS14680;Dbxref=GenBank:WP_020899084.1;Name=WP_020899084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=SO06_RS14680;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_020899084.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 88054 88683 . - . ID=gene-SO06_RS14685;Name=SO06_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14685 NZ_MYDG01000010.1 Protein Homology CDS 88054 88683 . - 0 ID=cds-WP_000077436.1;Parent=gene-SO06_RS14685;Dbxref=GenBank:WP_000077436.1;Name=WP_000077436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=SO06_RS14685;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000077436.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 88680 91058 . - . ID=gene-SO06_RS14690;Name=SO06_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14690 NZ_MYDG01000010.1 Protein Homology CDS 88680 91058 . - 0 ID=cds-WP_023231852.1;Parent=gene-SO06_RS14690;Dbxref=GenBank:WP_023231852.1;Name=WP_023231852.1;Ontology_term=GO:0009061,GO:0009055,GO:0009389,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=SO06_RS14690;product=DmsA/YnfE/YnfF family dimethyl sulfoxide reductase;protein_id=WP_023231852.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 91214 93529 . - . ID=gene-SO06_RS14695;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=SO06_RS14695 NZ_MYDG01000010.1 Protein Homology CDS 91214 93529 . - 0 ID=cds-WP_048348788.1;Parent=gene-SO06_RS14695;Dbxref=GenBank:WP_048348788.1;Name=WP_048348788.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=SO06_RS14695;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_048348788.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 93530 98464 . - . ID=gene-SO06_RS14700;Name=SO06_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14700 NZ_MYDG01000010.1 Protein Homology CDS 93530 98464 . - 0 ID=cds-WP_023232553.1;Parent=gene-SO06_RS14700;Dbxref=GenBank:WP_023232553.1;Name=WP_023232553.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=SO06_RS14700;product=alpha-2-macroglobulin family protein;protein_id=WP_023232553.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 98673 99515 . + . ID=gene-SO06_RS14705;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=SO06_RS14705 NZ_MYDG01000010.1 Protein Homology CDS 98673 99515 . + 0 ID=cds-WP_000205241.1;Parent=gene-SO06_RS14705;Dbxref=GenBank:WP_000205241.1;Name=WP_000205241.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=SO06_RS14705;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000205241.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 99495 99719 . - . ID=gene-SO06_RS25280;Name=SO06_RS25280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25280 NZ_MYDG01000010.1 Protein Homology CDS 99495 99719 . - 0 ID=cds-WP_001533267.1;Parent=gene-SO06_RS25280;Dbxref=GenBank:WP_001533267.1;Name=WP_001533267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=SO06_RS25280;product=hypothetical protein;protein_id=WP_001533267.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 99761 100429 . + . ID=gene-SO06_RS14715;Name=SO06_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14715 NZ_MYDG01000010.1 Protein Homology CDS 99761 100429 . + 0 ID=cds-WP_023232554.1;Parent=gene-SO06_RS14715;Dbxref=GenBank:WP_023232554.1;Name=WP_023232554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=SO06_RS14715;product=DUF5066 family protein;protein_id=WP_023232554.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 100845 100961 . + . ID=gene-SO06_RS25710;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=SO06_RS25710 NZ_MYDG01000010.1 Protein Homology CDS 100845 100961 . + 0 ID=cds-WP_353647394.1;Parent=gene-SO06_RS25710;Dbxref=GenBank:WP_353647394.1;Name=WP_353647394.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=SO06_RS25710;product=small toxic inner membrane protein TimP;protein_id=WP_353647394.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 100998 101774 . - . ID=gene-SO06_RS14725;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=SO06_RS14725 NZ_MYDG01000010.1 Protein Homology CDS 100998 101774 . - 0 ID=cds-WP_001533245.1;Parent=gene-SO06_RS14725;Dbxref=GenBank:WP_001533245.1;Name=WP_001533245.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=SO06_RS14725;product=enhanced serine sensitivity protein SseB;protein_id=WP_001533245.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 101881 103164 . - . ID=gene-SO06_RS14730;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=SO06_RS14730 NZ_MYDG01000010.1 Protein Homology CDS 101881 103164 . - 0 ID=cds-WP_080204257.1;Parent=gene-SO06_RS14730;Dbxref=GenBank:WP_080204257.1;Name=WP_080204257.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=SO06_RS14730;product=aminopeptidase PepB;protein_id=WP_080204257.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 103411 103611 . - . ID=gene-SO06_RS14740;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=SO06_RS14740 NZ_MYDG01000010.1 Protein Homology CDS 103411 103611 . - 0 ID=cds-WP_000523621.1;Parent=gene-SO06_RS14740;Dbxref=GenBank:WP_000523621.1;Name=WP_000523621.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=SO06_RS14740;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523621.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 103623 103958 . - . ID=gene-SO06_RS14745;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=SO06_RS14745 NZ_MYDG01000010.1 Protein Homology CDS 103623 103958 . - 0 ID=cds-WP_001124466.1;Parent=gene-SO06_RS14745;Dbxref=GenBank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=SO06_RS14745;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 103960 105810 . - . ID=gene-SO06_RS14750;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=SO06_RS14750 NZ_MYDG01000010.1 Protein Homology CDS 103960 105810 . - 0 ID=cds-WP_001196653.1;Parent=gene-SO06_RS14750;Dbxref=GenBank:WP_001196653.1;Name=WP_001196653.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=SO06_RS14750;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196653.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 105823 106338 . - . ID=gene-SO06_RS14755;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=SO06_RS14755 NZ_MYDG01000010.1 Protein Homology CDS 105823 106338 . - 0 ID=cds-WP_000384396.1;Parent=gene-SO06_RS14755;Dbxref=GenBank:WP_000384396.1;Name=WP_000384396.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=SO06_RS14755;product=co-chaperone HscB;protein_id=WP_000384396.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 106534 106857 . - . ID=gene-SO06_RS14760;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=SO06_RS14760 NZ_MYDG01000010.1 Protein Homology CDS 106534 106857 . - 0 ID=cds-WP_000028952.1;Parent=gene-SO06_RS14760;Dbxref=GenBank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=SO06_RS14760;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 106886 107272 . - . ID=gene-SO06_RS14765;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=SO06_RS14765 NZ_MYDG01000010.1 Protein Homology CDS 106886 107272 . - 0 ID=cds-WP_000331704.1;Parent=gene-SO06_RS14765;Dbxref=GenBank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=SO06_RS14765;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 107300 108514 . - . ID=gene-SO06_RS14770;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=SO06_RS14770 NZ_MYDG01000010.1 Protein Homology CDS 107300 108514 . - 0 ID=cds-WP_000775263.1;Parent=gene-SO06_RS14770;Dbxref=GenBank:WP_000775263.1;Name=WP_000775263.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=SO06_RS14770;product=cysteine desulfurase;protein_id=WP_000775263.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 108695 109189 . - . ID=gene-SO06_RS14775;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=SO06_RS14775 NZ_MYDG01000010.1 Protein Homology CDS 108695 109189 . - 0 ID=cds-WP_001241346.1;Parent=gene-SO06_RS14775;Dbxref=GenBank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=SO06_RS14775;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 109349 110080 . - . ID=gene-SO06_RS14780;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=SO06_RS14780 NZ_MYDG01000010.1 Protein Homology CDS 109349 110080 . - 0 ID=cds-WP_080204258.1;Parent=gene-SO06_RS14780;Dbxref=GenBank:WP_080204258.1;Name=WP_080204258.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=SO06_RS14780;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_080204258.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 110199 111002 . + . ID=gene-SO06_RS14785;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=SO06_RS14785 NZ_MYDG01000010.1 Protein Homology CDS 110199 111002 . + 0 ID=cds-WP_000553467.1;Parent=gene-SO06_RS14785;Dbxref=GenBank:WP_000553467.1;Name=WP_000553467.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=SO06_RS14785;product=inositol-1-monophosphatase;protein_id=WP_000553467.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 111147 112025 . + . ID=gene-SO06_RS14790;Name=SO06_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14790 NZ_MYDG01000010.1 Protein Homology CDS 111147 112025 . + 0 ID=cds-WP_000174944.1;Parent=gene-SO06_RS14790;Dbxref=GenBank:WP_000174944.1;Name=WP_000174944.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=SO06_RS14790;product=alpha/beta hydrolase;protein_id=WP_000174944.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 112207 113250 . + . ID=gene-SO06_RS14795;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=SO06_RS14795 NZ_MYDG01000010.1 Protein Homology CDS 112207 113250 . + 0 ID=cds-WP_080204259.1;Parent=gene-SO06_RS14795;Dbxref=GenBank:WP_080204259.1;Name=WP_080204259.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=SO06_RS14795;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_080204259.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 113254 114072 . + . ID=gene-SO06_RS14800;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=SO06_RS14800 NZ_MYDG01000010.1 Protein Homology CDS 113254 114072 . + 0 ID=cds-WP_000017585.1;Parent=gene-SO06_RS14800;Dbxref=GenBank:WP_000017585.1;Name=WP_000017585.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=SO06_RS14800;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_000017585.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 114083 115096 . + . ID=gene-SO06_RS14805;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=SO06_RS14805 NZ_MYDG01000010.1 Protein Homology CDS 114083 115096 . + 0 ID=cds-WP_000020685.1;Parent=gene-SO06_RS14805;Dbxref=GenBank:WP_000020685.1;Name=WP_000020685.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=SO06_RS14805;product=sulfite reductase subunit C;protein_id=WP_000020685.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 115097 116083 . - . ID=gene-SO06_RS14810;Name=SO06_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14810 NZ_MYDG01000010.1 Protein Homology CDS 115097 116083 . - 0 ID=cds-WP_080204260.1;Parent=gene-SO06_RS14810;Dbxref=GenBank:WP_080204260.1;Name=WP_080204260.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=SO06_RS14810;product=nickel/cobalt transporter;protein_id=WP_080204260.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 116074 116712 . - . ID=gene-SO06_RS14815;Name=SO06_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14815 NZ_MYDG01000010.1 Protein Homology CDS 116074 116712 . - 0 ID=cds-WP_039519006.1;Parent=gene-SO06_RS14815;Dbxref=GenBank:WP_039519006.1;Name=WP_039519006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=SO06_RS14815;product=DUF1007 family protein;protein_id=WP_039519006.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 116838 118115 . + . ID=gene-SO06_RS14820;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=SO06_RS14820 NZ_MYDG01000010.1 Protein Homology CDS 116838 118115 . + 0 ID=cds-WP_045342199.1;Parent=gene-SO06_RS14820;Dbxref=GenBank:WP_045342199.1;Name=WP_045342199.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=SO06_RS14820;product=stationary phase inducible protein CsiE;protein_id=WP_045342199.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 118110 119249 . - . ID=gene-SO06_RS14825;Name=SO06_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14825 NZ_MYDG01000010.1 Protein Homology CDS 118110 119249 . - 0 ID=cds-WP_001173729.1;Parent=gene-SO06_RS14825;Dbxref=GenBank:WP_001173729.1;Name=WP_001173729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=SO06_RS14825;product=3-phenylpropionate MFS transporter;protein_id=WP_001173729.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 119445 120698 . - . ID=gene-SO06_RS14830;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=SO06_RS14830 NZ_MYDG01000010.1 Protein Homology CDS 119445 120698 . - 0 ID=cds-WP_000919178.1;Parent=gene-SO06_RS14830;Dbxref=GenBank:WP_000919178.1;Name=WP_000919178.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=SO06_RS14830;product=serine hydroxymethyltransferase;protein_id=WP_000919178.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 121023 122213 . + . ID=gene-SO06_RS14835;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=SO06_RS14835 NZ_MYDG01000010.1 Protein Homology CDS 121023 122213 . + 0 ID=cds-WP_023232557.1;Parent=gene-SO06_RS14835;Dbxref=GenBank:WP_023232557.1;Name=WP_023232557.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=SO06_RS14835;product=NO-inducible flavohemoprotein;protein_id=WP_023232557.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 122395 123939 . + . ID=gene-SO06_RS14840;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=SO06_RS14840 NZ_MYDG01000010.1 Protein Homology CDS 122395 123939 . + 0 ID=cds-WP_001187146.1;Parent=gene-SO06_RS14840;Dbxref=GenBank:WP_001187146.1;Name=WP_001187146.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=SO06_RS14840;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187146.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 124300 125631 . + . ID=gene-SO06_RS14845;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=SO06_RS14845 NZ_MYDG01000010.1 Protein Homology CDS 124300 125631 . + 0 ID=cds-WP_000100008.1;Parent=gene-SO06_RS14845;Dbxref=GenBank:WP_000100008.1;Name=WP_000100008.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=SO06_RS14845;product=cadaverine/lysine antiporter;protein_id=WP_000100008.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 125714 127858 . + . ID=gene-SO06_RS14850;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=SO06_RS14850 NZ_MYDG01000010.1 Protein Homology CDS 125714 127858 . + 0 ID=cds-WP_001100652.1;Parent=gene-SO06_RS14850;Dbxref=GenBank:WP_001100652.1;Name=WP_001100652.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=SO06_RS14850;product=lysine decarboxylase CadA;protein_id=WP_001100652.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 127914 129374 . + . ID=gene-SO06_RS14855;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=SO06_RS14855 NZ_MYDG01000010.1 Protein Homology CDS 127914 129374 . + 0 ID=cds-WP_000856793.1;Parent=gene-SO06_RS14855;Dbxref=GenBank:WP_000856793.1;Name=WP_000856793.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=SO06_RS14855;product=dipeptide permease DtpD;protein_id=WP_000856793.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 129423 129761 . - . ID=gene-SO06_RS14860;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=SO06_RS14860 NZ_MYDG01000010.1 Protein Homology CDS 129423 129761 . - 0 ID=cds-WP_000717694.1;Parent=gene-SO06_RS14860;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=SO06_RS14860;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 129838 131172 . - . ID=gene-SO06_RS14865;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=SO06_RS14865 NZ_MYDG01000010.1 Protein Homology CDS 129838 131172 . - 0 ID=cds-WP_024148517.1;Parent=gene-SO06_RS14865;Dbxref=GenBank:WP_024148517.1;Name=WP_024148517.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=SO06_RS14865;product=two-component system response regulator GlrR;protein_id=WP_024148517.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 131172 131936 . - . ID=gene-SO06_RS14870;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=SO06_RS14870 NZ_MYDG01000010.1 Protein Homology CDS 131172 131936 . - 0 ID=cds-WP_001054239.1;Parent=gene-SO06_RS14870;Dbxref=GenBank:WP_001054239.1;Name=WP_001054239.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=SO06_RS14870;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001054239.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 131938 133368 . - . ID=gene-SO06_RS14875;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=SO06_RS14875 NZ_MYDG01000010.1 Protein Homology CDS 131938 133368 . - 0 ID=cds-WP_001670672.1;Parent=gene-SO06_RS14875;Dbxref=GenBank:WP_001670672.1;Name=WP_001670672.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=SO06_RS14875;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001670672.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 134017 137904 . - . ID=gene-SO06_RS14880;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=SO06_RS14880 NZ_MYDG01000010.1 Protein Homology CDS 134017 137904 . - 0 ID=cds-WP_023227947.1;Parent=gene-SO06_RS14880;Dbxref=GenBank:WP_023227947.1;Name=WP_023227947.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=SO06_RS14880;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_023227947.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 137929 138159 . + . ID=gene-SO06_RS14885;Name=SO06_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14885 NZ_MYDG01000010.1 Protein Homology CDS 137929 138159 . + 0 ID=cds-WP_001667158.1;Parent=gene-SO06_RS14885;Dbxref=GenBank:WP_001667158.1;Name=WP_001667158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669324.1;locus_tag=SO06_RS14885;product=hypothetical protein;protein_id=WP_001667158.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 138160 139704 . + . ID=gene-SO06_RS14890;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=SO06_RS14890 NZ_MYDG01000010.1 Protein Homology CDS 138160 139704 . + 0 ID=cds-WP_000734248.1;Parent=gene-SO06_RS14890;Dbxref=GenBank:WP_000734248.1;Name=WP_000734248.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=SO06_RS14890;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734248.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 139755 140306 . - . ID=gene-SO06_RS14895;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=SO06_RS14895 NZ_MYDG01000010.1 Protein Homology CDS 139755 140306 . - 0 ID=cds-WP_001134564.1;Parent=gene-SO06_RS14895;Dbxref=GenBank:WP_001134564.1;Name=WP_001134564.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=SO06_RS14895;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001134564.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 140331 140966 . - . ID=gene-SO06_RS14900;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=SO06_RS14900 NZ_MYDG01000010.1 Protein Homology CDS 140331 140966 . - 0 ID=cds-WP_000253558.1;Parent=gene-SO06_RS14900;Dbxref=GenBank:WP_000253558.1;Name=WP_000253558.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=SO06_RS14900;product=phosphatidylglycerophosphatase C;protein_id=WP_000253558.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 140970 142331 . - . ID=gene-SO06_RS14905;Name=SO06_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14905 NZ_MYDG01000010.1 Protein Homology CDS 140970 142331 . - 0 ID=cds-WP_000361660.1;Parent=gene-SO06_RS14905;Dbxref=GenBank:WP_000361660.1;Name=WP_000361660.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=SO06_RS14905;product=PTS transporter subunit EIIC;protein_id=WP_000361660.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 142342 143235 . - . ID=gene-SO06_RS14910;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=SO06_RS14910 NZ_MYDG01000010.1 Protein Homology CDS 142342 143235 . - 0 ID=cds-WP_023231995.1;Parent=gene-SO06_RS14910;Dbxref=GenBank:WP_023231995.1;Name=WP_023231995.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=SO06_RS14910;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_023231995.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 143351 144199 . + . ID=gene-SO06_RS14915;Name=SO06_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14915 NZ_MYDG01000010.1 Protein Homology CDS 143351 144199 . + 0 ID=cds-WP_000995703.1;Parent=gene-SO06_RS14915;Dbxref=GenBank:WP_000995703.1;Name=WP_000995703.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=SO06_RS14915;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000995703.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 144238 145155 . - . ID=gene-SO06_RS14920;Name=SO06_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14920 NZ_MYDG01000010.1 Protein Homology CDS 144238 145155 . - 0 ID=cds-WP_000684036.1;Parent=gene-SO06_RS14920;Dbxref=GenBank:WP_000684036.1;Name=WP_000684036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=SO06_RS14920;product=oxidoreductase;protein_id=WP_000684036.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 145177 146373 . - . ID=gene-SO06_RS14925;Name=SO06_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14925 NZ_MYDG01000010.1 Protein Homology CDS 145177 146373 . - 0 ID=cds-WP_001276364.1;Parent=gene-SO06_RS14925;Dbxref=GenBank:WP_001276364.1;Name=WP_001276364.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=SO06_RS14925;product=L-lactate MFS transporter;protein_id=WP_001276364.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 146489 147415 . + . ID=gene-SO06_RS14930;Name=SO06_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14930 NZ_MYDG01000010.1 Protein Homology CDS 146489 147415 . + 0 ID=cds-WP_001022463.1;Parent=gene-SO06_RS14930;Dbxref=GenBank:WP_001022463.1;Name=WP_001022463.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=SO06_RS14930;product=LysR family transcriptional regulator;protein_id=WP_001022463.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 147453 147713 . + . ID=gene-SO06_RS14935;Name=SO06_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14935 NZ_MYDG01000010.1 Protein Homology CDS 147453 147713 . + 0 ID=cds-WP_001196291.1;Parent=gene-SO06_RS14935;Dbxref=GenBank:WP_001196291.1;Name=WP_001196291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=SO06_RS14935;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196291.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 147825 148205 . - . ID=gene-SO06_RS14940;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=SO06_RS14940 NZ_MYDG01000010.1 Protein Homology CDS 147825 148205 . - 0 ID=cds-WP_000986042.1;Parent=gene-SO06_RS14940;Dbxref=GenBank:WP_000986042.1;Name=WP_000986042.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=SO06_RS14940;product=holo-ACP synthase;protein_id=WP_000986042.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 148205 148936 . - . ID=gene-SO06_RS14945;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=SO06_RS14945 NZ_MYDG01000010.1 Protein Homology CDS 148205 148936 . - 0 ID=cds-WP_000818969.1;Parent=gene-SO06_RS14945;Dbxref=GenBank:WP_000818969.1;Name=WP_000818969.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=SO06_RS14945;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818969.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 148948 149676 . - . ID=gene-SO06_RS14950;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=SO06_RS14950 NZ_MYDG01000010.1 Protein Homology CDS 148948 149676 . - 0 ID=cds-WP_000399380.1;Parent=gene-SO06_RS14950;Dbxref=GenBank:WP_000399380.1;Name=WP_000399380.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=SO06_RS14950;product=DNA repair protein RecO;protein_id=WP_000399380.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 149688 150593 . - . ID=gene-SO06_RS14955;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=SO06_RS14955 NZ_MYDG01000010.1 Protein Homology CDS 149688 150593 . - 0 ID=cds-WP_000102230.1;Parent=gene-SO06_RS14955;Dbxref=GenBank:WP_000102230.1;Name=WP_000102230.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=SO06_RS14955;product=GTPase Era;protein_id=WP_000102230.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 150590 151270 . - . ID=gene-SO06_RS14960;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=SO06_RS14960 NZ_MYDG01000010.1 Protein Homology CDS 150590 151270 . - 0 ID=cds-WP_001068341.1;Parent=gene-SO06_RS14960;Dbxref=GenBank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=SO06_RS14960;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 151544 152518 . - . ID=gene-SO06_RS14970;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=SO06_RS14970 NZ_MYDG01000010.1 Protein Homology CDS 151544 152518 . - 0 ID=cds-WP_023231994.1;Parent=gene-SO06_RS14970;Dbxref=GenBank:WP_023231994.1;Name=WP_023231994.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=SO06_RS14970;product=signal peptidase I;protein_id=WP_023231994.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 152535 154334 . - . ID=gene-SO06_RS14975;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=SO06_RS14975 NZ_MYDG01000010.1 Protein Homology CDS 152535 154334 . - 0 ID=cds-WP_000790154.1;Parent=gene-SO06_RS14975;Dbxref=GenBank:WP_000790154.1;Name=WP_000790154.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=SO06_RS14975;product=translation elongation factor 4;protein_id=WP_000790154.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 154586 155065 . - . ID=gene-SO06_RS14985;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=SO06_RS14985 NZ_MYDG01000010.1 Protein Homology CDS 154586 155065 . - 0 ID=cds-WP_000589049.1;Parent=gene-SO06_RS14985;Dbxref=GenBank:WP_000589049.1;Name=WP_000589049.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=SO06_RS14985;product=SoxR-reducing system protein RseC;protein_id=WP_000589049.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 155062 156018 . - . ID=gene-SO06_RS14990;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=SO06_RS14990 NZ_MYDG01000010.1 Protein Homology CDS 155062 156018 . - 0 ID=cds-WP_000812021.1;Parent=gene-SO06_RS14990;Dbxref=GenBank:WP_000812021.1;Name=WP_000812021.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=SO06_RS14990;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812021.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 156018 156668 . - . ID=gene-SO06_RS14995;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=SO06_RS14995 NZ_MYDG01000010.1 Protein Homology CDS 156018 156668 . - 0 ID=cds-WP_001168374.1;Parent=gene-SO06_RS14995;Dbxref=GenBank:WP_001168374.1;Name=WP_001168374.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=SO06_RS14995;product=anti-sigma-E factor RseA;protein_id=WP_001168374.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 156700 157275 . - . ID=gene-SO06_RS15000;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=SO06_RS15000 NZ_MYDG01000010.1 Protein Homology CDS 156700 157275 . - 0 ID=cds-WP_000003307.1;Parent=gene-SO06_RS15000;Dbxref=GenBank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=SO06_RS15000;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 157272 157436 . - . ID=gene-SO06_RS25070;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=SO06_RS25070 NZ_MYDG01000010.1 Protein Homology CDS 157272 157436 . - 0 ID=cds-WP_014344135.1;Parent=gene-SO06_RS25070;Dbxref=GenBank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=SO06_RS25070;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 157700 159322 . + . ID=gene-SO06_RS15010;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=SO06_RS15010 NZ_MYDG01000010.1 Protein Homology CDS 157700 159322 . + 0 ID=cds-WP_000989184.1;Parent=gene-SO06_RS15010;Dbxref=GenBank:WP_000989184.1;Name=WP_000989184.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=SO06_RS15010;product=L-aspartate oxidase;protein_id=WP_000989184.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 159307 160044 . - . ID=gene-SO06_RS15015;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=SO06_RS15015 NZ_MYDG01000010.1 Protein Homology CDS 159307 160044 . - 0 ID=cds-WP_023231993.1;Parent=gene-SO06_RS15015;Dbxref=GenBank:WP_023231993.1;Name=WP_023231993.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=SO06_RS15015;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_023231993.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 160174 161508 . + . ID=gene-SO06_RS15020;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=SO06_RS15020 NZ_MYDG01000010.1 Protein Homology CDS 160174 161508 . + 0 ID=cds-WP_000219174.1;Parent=gene-SO06_RS15020;Dbxref=GenBank:WP_000219174.1;Name=WP_000219174.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=SO06_RS15020;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219174.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 161526 162425 . - . ID=gene-SO06_RS15025;Name=SO06_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15025 NZ_MYDG01000010.1 Protein Homology CDS 161526 162425 . - 0 ID=cds-WP_001526875.1;Parent=gene-SO06_RS15025;Dbxref=GenBank:WP_001526875.1;Name=WP_001526875.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=SO06_RS15025;product=LysR family transcriptional regulator;protein_id=WP_001526875.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 162528 163115 . + . ID=gene-SO06_RS15030;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=SO06_RS15030 NZ_MYDG01000010.1 Protein Homology CDS 162528 163115 . + 0 ID=cds-WP_000188414.1;Parent=gene-SO06_RS15030;Dbxref=GenBank:WP_000188414.1;Name=WP_000188414.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=SO06_RS15030;product=cysteine/O-acetylserine transporter;protein_id=WP_000188414.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 163177 163560 . - . ID=gene-SO06_RS15035;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=SO06_RS15035 NZ_MYDG01000010.1 Protein Homology CDS 163177 163560 . - 0 ID=cds-WP_000627811.1;Parent=gene-SO06_RS15035;Dbxref=GenBank:WP_000627811.1;Name=WP_000627811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=SO06_RS15035;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 163879 164568 . + . ID=gene-SO06_RS15040;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=SO06_RS15040 NZ_MYDG01000010.1 Protein Homology CDS 163879 164568 . + 0 ID=cds-WP_000179978.1;Parent=gene-SO06_RS15040;Dbxref=GenBank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=SO06_RS15040;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 164684 165721 . - . ID=gene-SO06_RS15045;Name=SO06_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15045 NZ_MYDG01000010.1 Protein Homology CDS 164684 165721 . - 0 ID=cds-WP_023231992.1;Parent=gene-SO06_RS15045;Dbxref=GenBank:WP_023231992.1;Name=WP_023231992.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=SO06_RS15045;product=tRNA/rRNA methyltransferase;protein_id=WP_023231992.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 165925 166344 . + . ID=gene-SO06_RS15050;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=SO06_RS15050 NZ_MYDG01000010.1 Protein Homology CDS 165925 166344 . + 0 ID=cds-WP_001098732.1;Parent=gene-SO06_RS15050;Dbxref=GenBank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=SO06_RS15050;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 166417 167097 . + . ID=gene-SO06_RS15055;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=SO06_RS15055 NZ_MYDG01000010.1 Protein Homology CDS 166417 167097 . + 0 ID=cds-WP_000183644.1;Parent=gene-SO06_RS15055;Dbxref=GenBank:WP_000183644.1;Name=WP_000183644.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=SO06_RS15055;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_000183644.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 167151 169811 . + . ID=gene-SO06_RS15060;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=SO06_RS15060 NZ_MYDG01000010.1 Protein Homology CDS 167151 169811 . + 0 ID=cds-WP_023231991.1;Parent=gene-SO06_RS15060;Dbxref=GenBank:WP_023231991.1;Name=WP_023231991.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=SO06_RS15060;product=protein lysine acetyltransferase;protein_id=WP_023231991.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 169926 171281 . + . ID=gene-SO06_RS15065;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=SO06_RS15065 NZ_MYDG01000010.1 Protein Homology CDS 169926 171281 . + 0 ID=cds-WP_000949286.1;Parent=gene-SO06_RS15065;Dbxref=GenBank:WP_000949286.1;Name=WP_000949286.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=SO06_RS15065;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 171326 171649 . + . ID=gene-SO06_RS15070;Name=SO06_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15070 NZ_MYDG01000010.1 Protein Homology CDS 171326 171649 . + 0 ID=cds-WP_001264473.1;Parent=gene-SO06_RS15070;Dbxref=GenBank:WP_001264473.1;Name=WP_001264473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=SO06_RS15070;product=YfiM family lipoprotein;protein_id=WP_001264473.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 171646 172947 . - . ID=gene-SO06_RS15075;Name=SO06_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15075 NZ_MYDG01000010.1 Protein Homology CDS 171646 172947 . - 0 ID=cds-WP_000807818.1;Parent=gene-SO06_RS15075;Dbxref=GenBank:WP_000807818.1;Name=WP_000807818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=SO06_RS15075;product=MFS transporter;protein_id=WP_000807818.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 173051 173506 . - . ID=gene-SO06_RS15080;Name=SO06_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15080 NZ_MYDG01000010.1 Protein Homology CDS 173051 173506 . - 0 ID=cds-WP_000985653.1;Parent=gene-SO06_RS15080;Dbxref=GenBank:WP_000985653.1;Name=WP_000985653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=SO06_RS15080;product=DUF4385 domain-containing protein;protein_id=WP_000985653.1;transl_table=11 NZ_MYDG01000010.1 RefSeq gene 173763 173878 . - . ID=gene-SO06_RS15085;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=SO06_RS15085 NZ_MYDG01000010.1 cmsearch rRNA 173763 173878 . - . ID=rna-SO06_RS15085;Parent=gene-SO06_RS15085;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS15085;product=5S ribosomal RNA NZ_MYDG01000010.1 cmsearch exon 173763 173878 . - . ID=exon-SO06_RS15085-1;Parent=rna-SO06_RS15085;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS15085;product=5S ribosomal RNA NZ_MYDG01000010.1 RefSeq gene 173972 174145 . - . ID=gene-SO06_RS15090;Name=SO06_RS15090;end_range=174145,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=SO06_RS15090;partial=true NZ_MYDG01000010.1 cmsearch rRNA 173972 174145 . - . ID=rna-SO06_RS15090;Parent=gene-SO06_RS15090;Dbxref=RFAM:RF02541;end_range=174145,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS15090;partial=true;product=23S ribosomal RNA NZ_MYDG01000010.1 cmsearch exon 173972 174145 . - . ID=exon-SO06_RS15090-1;Parent=rna-SO06_RS15090;Dbxref=RFAM:RF02541;end_range=174145,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS15090;partial=true;product=23S ribosomal RNA ##sequence-region NZ_MYDG01000011.1 1 133685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000011.1 RefSeq region 1 133685 . + . ID=NZ_MYDG01000011.1:1..133685;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000011.1 RefSeq gene 361 876 . - . ID=gene-SO06_RS15095;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=SO06_RS15095 NZ_MYDG01000011.1 Protein Homology CDS 361 876 . - 0 ID=cds-WP_010989085.1;Parent=gene-SO06_RS15095;Dbxref=GenBank:WP_010989085.1;Name=WP_010989085.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=SO06_RS15095;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_010989085.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 873 1457 . - . ID=gene-SO06_RS15100;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=SO06_RS15100 NZ_MYDG01000011.1 Protein Homology CDS 873 1457 . - 0 ID=cds-WP_001046883.1;Parent=gene-SO06_RS15100;Dbxref=GenBank:WP_001046883.1;Name=WP_001046883.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=SO06_RS15100;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001046883.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 1527 1796 . + . ID=gene-SO06_RS15105;Name=SO06_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15105 NZ_MYDG01000011.1 Protein Homology CDS 1527 1796 . + 0 ID=cds-WP_000649858.1;Parent=gene-SO06_RS15105;Dbxref=GenBank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=SO06_RS15105;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 1873 2859 . + . ID=gene-SO06_RS15110;Name=SO06_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15110 NZ_MYDG01000011.1 Protein Homology CDS 1873 2859 . + 0 ID=cds-WP_000999264.1;Parent=gene-SO06_RS15110;Dbxref=GenBank:WP_000999264.1;Name=WP_000999264.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=SO06_RS15110;product=serine/threonine protein kinase;protein_id=WP_000999264.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 2876 3499 . + . ID=gene-SO06_RS15115;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=SO06_RS15115 NZ_MYDG01000011.1 Protein Homology CDS 2876 3499 . + 0 ID=cds-WP_000725364.1;Parent=gene-SO06_RS15115;Dbxref=GenBank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=SO06_RS15115;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 3512 4420 . - . ID=gene-SO06_RS15120;Name=SO06_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15120 NZ_MYDG01000011.1 Protein Homology CDS 3512 4420 . - 0 ID=cds-WP_000196902.1;Parent=gene-SO06_RS15120;Dbxref=GenBank:WP_000196902.1;Name=WP_000196902.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=SO06_RS15120;product=acyltransferase;protein_id=WP_000196902.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 4808 7594 . + . ID=gene-SO06_RS15130;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=SO06_RS15130 NZ_MYDG01000011.1 Protein Homology CDS 4808 7594 . + 0 ID=cds-WP_000249960.1;Parent=gene-SO06_RS15130;Dbxref=GenBank:WP_000249960.1;Name=WP_000249960.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=SO06_RS15130;product=DNA polymerase I;protein_id=WP_000249960.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 7761 7808 . + . ID=gene-SO06_RS25800;Name=SO06_RS25800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25800 NZ_MYDG01000011.1 Protein Homology CDS 7761 7808 . + 0 ID=cds-WP_071892919.1;Parent=gene-SO06_RS25800;Dbxref=GenBank:WP_071892919.1;Name=WP_071892919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_013606034.1;locus_tag=SO06_RS25800;product=spot 42 RNA%2C inhibition of DNA synthesis;protein_id=WP_071892919.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 7929 8561 . - . ID=gene-SO06_RS15135;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=SO06_RS15135 NZ_MYDG01000011.1 Protein Homology CDS 7929 8561 . - 0 ID=cds-WP_000183327.1;Parent=gene-SO06_RS15135;Dbxref=GenBank:WP_000183327.1;Name=WP_000183327.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=SO06_RS15135;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183327.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 8801 9025 . + . ID=gene-SO06_RS15140;Name=SO06_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15140 NZ_MYDG01000011.1 Protein Homology CDS 8801 9025 . + 0 ID=cds-WP_001541209.1;Parent=gene-SO06_RS15140;Dbxref=GenBank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=SO06_RS15140;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 9144 9659 . + . ID=gene-SO06_RS15145;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=SO06_RS15145 NZ_MYDG01000011.1 Protein Homology CDS 9144 9659 . + 0 ID=cds-WP_000743292.1;Parent=gene-SO06_RS15145;Dbxref=GenBank:WP_000743292.1;Name=WP_000743292.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=SO06_RS15145;product=Der GTPase-activating protein YihI;protein_id=WP_000743292.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 9848 11221 . + . ID=gene-SO06_RS15150;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=SO06_RS15150 NZ_MYDG01000011.1 Protein Homology CDS 9848 11221 . + 0 ID=cds-WP_000003528.1;Parent=gene-SO06_RS15150;Dbxref=GenBank:WP_000003528.1;Name=WP_000003528.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=SO06_RS15150;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000003528.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 11311 11421 . - . ID=gene-SO06_RS25075;Name=SO06_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25075 NZ_MYDG01000011.1 Protein Homology CDS 11311 11421 . - 0 ID=cds-WP_001578131.1;Parent=gene-SO06_RS25075;Dbxref=GenBank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=SO06_RS25075;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 11534 12943 . - . ID=gene-SO06_RS15155;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=SO06_RS15155 NZ_MYDG01000011.1 Protein Homology CDS 11534 12943 . - 0 ID=cds-WP_001188782.1;Parent=gene-SO06_RS15155;Dbxref=GenBank:WP_001188782.1;Name=WP_001188782.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=SO06_RS15155;product=nitrogen regulation protein NR(I);protein_id=WP_001188782.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 12952 14001 . - . ID=gene-SO06_RS15160;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=SO06_RS15160 NZ_MYDG01000011.1 Protein Homology CDS 12952 14001 . - 0 ID=cds-WP_000146194.1;Parent=gene-SO06_RS15160;Dbxref=GenBank:WP_000146194.1;Name=WP_000146194.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=SO06_RS15160;product=nitrogen regulation protein NR(II);protein_id=WP_000146194.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 14276 15685 . - . ID=gene-SO06_RS15175;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=SO06_RS15175 NZ_MYDG01000011.1 Protein Homology CDS 14276 15685 . - 0 ID=cds-WP_001271699.1;Parent=gene-SO06_RS15175;Dbxref=GenBank:WP_001271699.1;Name=WP_001271699.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=SO06_RS15175;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 16061 17884 . + . ID=gene-SO06_RS15185;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=SO06_RS15185 NZ_MYDG01000011.1 Protein Homology CDS 16061 17884 . + 0 ID=cds-WP_000572060.1;Parent=gene-SO06_RS15185;Dbxref=GenBank:WP_000572060.1;Name=WP_000572060.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=SO06_RS15185;product=ribosome-dependent GTPase TypA;protein_id=WP_000572060.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 17939 18673 . - . ID=gene-SO06_RS15190;Name=SO06_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15190 NZ_MYDG01000011.1 Protein Homology CDS 17939 18673 . - 0 ID=cds-WP_023232725.1;Parent=gene-SO06_RS15190;Dbxref=GenBank:WP_023232725.1;Name=WP_023232725.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=SO06_RS15190;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_023232725.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 18658 19536 . - . ID=gene-SO06_RS15195;Name=SO06_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15195 NZ_MYDG01000011.1 Protein Homology CDS 18658 19536 . - 0 ID=cds-WP_048348792.1;Parent=gene-SO06_RS15195;Dbxref=GenBank:WP_048348792.1;Name=WP_048348792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=SO06_RS15195;product=STM4011 family radical SAM protein;protein_id=WP_048348792.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 19533 20774 . - . ID=gene-SO06_RS15200;Name=SO06_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15200 NZ_MYDG01000011.1 Protein Homology CDS 19533 20774 . - 0 ID=cds-WP_023232505.1;Parent=gene-SO06_RS15200;Dbxref=GenBank:WP_023232505.1;Name=WP_023232505.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=SO06_RS15200;product=STM4012 family radical SAM protein;protein_id=WP_023232505.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 20776 21651 . - . ID=gene-SO06_RS15205;Name=SO06_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15205 NZ_MYDG01000011.1 Protein Homology CDS 20776 21651 . - 0 ID=cds-WP_001627355.1;Parent=gene-SO06_RS15205;Dbxref=GenBank:WP_001627355.1;Name=WP_001627355.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=SO06_RS15205;product=STM4013/SEN3800 family hydrolase;protein_id=WP_001627355.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 21644 22669 . - . ID=gene-SO06_RS15210;Name=SO06_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15210 NZ_MYDG01000011.1 Protein Homology CDS 21644 22669 . - 0 ID=cds-WP_077248423.1;Parent=gene-SO06_RS15210;Dbxref=GenBank:WP_077248423.1;Name=WP_077248423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=SO06_RS15210;product=STM4014 family protein;protein_id=WP_077248423.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 22682 23530 . - . ID=gene-SO06_RS15215;Name=SO06_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15215 NZ_MYDG01000011.1 Protein Homology CDS 22682 23530 . - 0 ID=cds-WP_023232504.1;Parent=gene-SO06_RS15215;Dbxref=GenBank:WP_023232504.1;Name=WP_023232504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=SO06_RS15215;product=STM4015 family protein;protein_id=WP_023232504.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 23687 24379 . - . ID=gene-SO06_RS15220;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=SO06_RS15220 NZ_MYDG01000011.1 Protein Homology CDS 23687 24379 . - 0 ID=cds-WP_000838828.1;Parent=gene-SO06_RS15220;Dbxref=GenBank:WP_000838828.1;Name=WP_000838828.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=SO06_RS15220;product=porin OmpL;protein_id=WP_000838828.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 24447 25868 . - . ID=gene-SO06_RS15225;Name=SO06_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15225 NZ_MYDG01000011.1 Protein Homology CDS 24447 25868 . - 0 ID=cds-WP_000064888.1;Parent=gene-SO06_RS15225;Dbxref=GenBank:WP_000064888.1;Name=WP_000064888.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=SO06_RS15225;product=MFS transporter;protein_id=WP_000064888.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 25914 27296 . - . ID=gene-SO06_RS15230;Name=SO06_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15230 NZ_MYDG01000011.1 Protein Homology CDS 25914 27296 . - 0 ID=cds-WP_000084245.1;Parent=gene-SO06_RS15230;Dbxref=GenBank:WP_000084245.1;Name=WP_000084245.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=SO06_RS15230;product=MFS transporter;protein_id=WP_000084245.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 27342 29378 . - . ID=gene-SO06_RS15235;Name=SO06_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15235 NZ_MYDG01000011.1 Protein Homology CDS 27342 29378 . - 0 ID=cds-WP_023232503.1;Parent=gene-SO06_RS15235;Dbxref=GenBank:WP_023232503.1;Name=WP_023232503.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=SO06_RS15235;product=alpha-glucosidase;protein_id=WP_023232503.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 29422 30279 . - . ID=gene-SO06_RS15240;Name=SO06_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15240 NZ_MYDG01000011.1 Protein Homology CDS 29422 30279 . - 0 ID=cds-WP_023206316.1;Parent=gene-SO06_RS15240;Dbxref=GenBank:WP_023206316.1;Name=WP_023206316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=SO06_RS15240;product=aldose-1-epimerase;protein_id=WP_023206316.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 30283 31524 . - . ID=gene-SO06_RS15245;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=SO06_RS15245 NZ_MYDG01000011.1 Protein Homology CDS 30283 31524 . - 0 ID=cds-WP_023232502.1;Parent=gene-SO06_RS15245;Dbxref=GenBank:WP_023232502.1;Name=WP_023232502.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=SO06_RS15245;product=sulfoquinovose isomerase;protein_id=WP_023232502.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 31540 32418 . - . ID=gene-SO06_RS15250;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=SO06_RS15250 NZ_MYDG01000011.1 Protein Homology CDS 31540 32418 . - 0 ID=cds-WP_023232501.1;Parent=gene-SO06_RS15250;Dbxref=GenBank:WP_023232501.1;Name=WP_023232501.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=SO06_RS15250;product=sulfofructosephosphate aldolase;protein_id=WP_023232501.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 32441 33337 . - . ID=gene-SO06_RS15255;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=SO06_RS15255 NZ_MYDG01000011.1 Protein Homology CDS 32441 33337 . - 0 ID=cds-WP_023242402.1;Parent=gene-SO06_RS15255;Dbxref=GenBank:WP_023242402.1;Name=WP_023242402.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=SO06_RS15255;product=sulfolactaldehyde 3-reductase;protein_id=WP_023242402.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 33502 34398 . + . ID=gene-SO06_RS15260;Name=SO06_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15260 NZ_MYDG01000011.1 Protein Homology CDS 33502 34398 . + 0 ID=cds-WP_001520529.1;Parent=gene-SO06_RS15260;Dbxref=GenBank:WP_001520529.1;Name=WP_001520529.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=SO06_RS15260;product=sugar kinase;protein_id=WP_001520529.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 34432 35235 . + . ID=gene-SO06_RS15265;Name=SO06_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15265 NZ_MYDG01000011.1 Protein Homology CDS 34432 35235 . + 0 ID=cds-WP_000059693.1;Parent=gene-SO06_RS15265;Dbxref=GenBank:WP_000059693.1;Name=WP_000059693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=SO06_RS15265;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059693.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 35426 36025 . + . ID=gene-SO06_RS15270;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=SO06_RS15270 NZ_MYDG01000011.1 Protein Homology CDS 35426 36025 . + 0 ID=cds-WP_000965695.1;Parent=gene-SO06_RS15270;Dbxref=GenBank:WP_000965695.1;Name=WP_000965695.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=SO06_RS15270;product=glucose-1-phosphatase;protein_id=WP_000965695.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 36019 36888 . + . ID=gene-SO06_RS15275;Name=SO06_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15275 NZ_MYDG01000011.1 Protein Homology CDS 36019 36888 . + 0 ID=cds-WP_023203606.1;Parent=gene-SO06_RS15275;Dbxref=GenBank:WP_023203606.1;Name=WP_023203606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=SO06_RS15275;product=virulence factor BrkB family protein;protein_id=WP_023203606.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 36885 37322 . + . ID=gene-SO06_RS15280;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=SO06_RS15280 NZ_MYDG01000011.1 Protein Homology CDS 36885 37322 . + 0 ID=cds-WP_000560969.1;Parent=gene-SO06_RS15280;Dbxref=GenBank:WP_000560969.1;Name=WP_000560969.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=SO06_RS15280;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560969.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 37367 38308 . + . ID=gene-SO06_RS15285;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=SO06_RS15285 NZ_MYDG01000011.1 Protein Homology CDS 37367 38308 . + 0 ID=cds-WP_001518251.1;Parent=gene-SO06_RS15285;Dbxref=GenBank:WP_001518251.1;Name=WP_001518251.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=SO06_RS15285;product=fatty acid biosynthesis protein FabY;protein_id=WP_001518251.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 38323 38769 . - . ID=gene-SO06_RS15290;Name=SO06_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15290 NZ_MYDG01000011.1 Protein Homology CDS 38323 38769 . - 0 ID=cds-WP_001259011.1;Parent=gene-SO06_RS15290;Dbxref=GenBank:WP_001259011.1;Name=WP_001259011.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=SO06_RS15290;product=helix-turn-helix domain-containing protein;protein_id=WP_001259011.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 38766 39077 . - . ID=gene-SO06_RS15295;Name=SO06_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15295 NZ_MYDG01000011.1 Protein Homology CDS 38766 39077 . - 0 ID=cds-WP_000558164.1;Parent=gene-SO06_RS15295;Dbxref=GenBank:WP_000558164.1;Name=WP_000558164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=SO06_RS15295;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000558164.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 39163 40092 . - . ID=gene-SO06_RS15300;Name=SO06_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15300 NZ_MYDG01000011.1 Protein Homology CDS 39163 40092 . - 0 ID=cds-WP_023232500.1;Parent=gene-SO06_RS15300;Dbxref=GenBank:WP_023232500.1;Name=WP_023232500.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=SO06_RS15300;product=alpha/beta hydrolase;protein_id=WP_023232500.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 40310 40621 . + . ID=gene-SO06_RS15305;Name=SO06_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15305 NZ_MYDG01000011.1 Protein Homology CDS 40310 40621 . + 0 ID=cds-WP_023232499.1;Parent=gene-SO06_RS15305;Dbxref=GenBank:WP_023232499.1;Name=WP_023232499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=SO06_RS15305;product=hypothetical protein;protein_id=WP_023232499.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 40622 40912 . + . ID=gene-SO06_RS15310;Name=SO06_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15310 NZ_MYDG01000011.1 Protein Homology CDS 40622 40912 . + 0 ID=cds-WP_000362050.1;Parent=gene-SO06_RS15310;Dbxref=GenBank:WP_000362050.1;Name=WP_000362050.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=SO06_RS15310;product=helix-turn-helix domain-containing protein;protein_id=WP_000362050.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 40959 41888 . - . ID=gene-SO06_RS15315;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=SO06_RS15315 NZ_MYDG01000011.1 Protein Homology CDS 40959 41888 . - 0 ID=cds-WP_000027730.1;Parent=gene-SO06_RS15315;Dbxref=GenBank:WP_000027730.1;Name=WP_000027730.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=SO06_RS15315;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027730.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 41885 42520 . - . ID=gene-SO06_RS15320;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=SO06_RS15320 NZ_MYDG01000011.1 Protein Homology CDS 41885 42520 . - 0 ID=cds-WP_000829025.1;Parent=gene-SO06_RS15320;Dbxref=GenBank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=SO06_RS15320;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 42517 43419 . - . ID=gene-SO06_RS15325;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=SO06_RS15325 NZ_MYDG01000011.1 Protein Homology CDS 42517 43419 . - 0 ID=cds-WP_000331361.1;Parent=gene-SO06_RS15325;Dbxref=GenBank:WP_000331361.1;Name=WP_000331361.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=SO06_RS15325;product=formate dehydrogenase subunit beta;protein_id=WP_000331361.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 43432 46482 . - . ID=gene-SO06_RS15330;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=SO06_RS15330 NZ_MYDG01000011.1 Protein Homology CDS 43432 46482 . - 0 ID=cds-WP_077248424.1;Parent=gene-SO06_RS15330;Dbxref=GenBank:WP_077248424.1;Name=WP_077248424.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=SO06_RS15330;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077248424.1;transl_except=(pos:complement(45895..45897)%2Caa:Sec);transl_table=11 NZ_MYDG01000011.1 RefSeq gene 46677 47513 . + . ID=gene-SO06_RS15335;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=SO06_RS15335 NZ_MYDG01000011.1 Protein Homology CDS 46677 47513 . + 0 ID=cds-WP_001059739.1;Parent=gene-SO06_RS15335;Dbxref=GenBank:WP_001059739.1;Name=WP_001059739.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=SO06_RS15335;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059739.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 47781 48812 . - . ID=gene-SO06_RS15340;Name=SO06_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15340 NZ_MYDG01000011.1 Protein Homology CDS 47781 48812 . - 0 ID=cds-WP_023232498.1;Parent=gene-SO06_RS15340;Dbxref=GenBank:WP_023232498.1;Name=WP_023232498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=SO06_RS15340;product=YiiG family protein;protein_id=WP_023232498.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 48995 50095 . + . ID=gene-SO06_RS15345;Name=SO06_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15345 NZ_MYDG01000011.1 Protein Homology CDS 48995 50095 . + 0 ID=cds-WP_000828048.1;Parent=gene-SO06_RS15345;Dbxref=GenBank:WP_000828048.1;Name=WP_000828048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=SO06_RS15345;product=YiiG family protein;protein_id=WP_000828048.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 50451 50774 . - . ID=gene-SO06_RS15350;Name=SO06_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15350 NZ_MYDG01000011.1 Protein Homology CDS 50451 50774 . - 0 ID=cds-WP_000527677.1;Parent=gene-SO06_RS15350;Dbxref=GenBank:WP_000527677.1;Name=WP_000527677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=SO06_RS15350;product=AzlD domain-containing protein;protein_id=WP_000527677.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 50774 51433 . - . ID=gene-SO06_RS15355;Name=SO06_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15355 NZ_MYDG01000011.1 Protein Homology CDS 50774 51433 . - 0 ID=cds-WP_000683586.1;Parent=gene-SO06_RS15355;Dbxref=GenBank:WP_000683586.1;Name=WP_000683586.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=SO06_RS15355;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 51534 52082 . + . ID=gene-SO06_RS15360;Name=SO06_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15360 NZ_MYDG01000011.1 Protein Homology CDS 51534 52082 . + 0 ID=cds-WP_001517951.1;Parent=gene-SO06_RS15360;Dbxref=GenBank:WP_001517951.1;Name=WP_001517951.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=SO06_RS15360;product=helix-turn-helix domain-containing protein;protein_id=WP_001517951.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 52171 52485 . - . ID=gene-SO06_RS15365;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=SO06_RS15365 NZ_MYDG01000011.1 Protein Homology CDS 52171 52485 . - 0 ID=cds-WP_000619478.1;Parent=gene-SO06_RS15365;Dbxref=GenBank:WP_000619478.1;Name=WP_000619478.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=SO06_RS15365;product=L-rhamnose mutarotase;protein_id=WP_000619478.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 52482 53630 . - . ID=gene-SO06_RS15370;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=SO06_RS15370 NZ_MYDG01000011.1 Protein Homology CDS 52482 53630 . - 0 ID=cds-WP_000009254.1;Parent=gene-SO06_RS15370;Dbxref=GenBank:WP_000009254.1;Name=WP_000009254.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=SO06_RS15370;product=lactaldehyde reductase;protein_id=WP_000009254.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 53757 54584 . - . ID=gene-SO06_RS15375;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=SO06_RS15375 NZ_MYDG01000011.1 Protein Homology CDS 53757 54584 . - 0 ID=cds-WP_023232497.1;Parent=gene-SO06_RS15375;Dbxref=GenBank:WP_023232497.1;Name=WP_023232497.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=SO06_RS15375;product=rhamnulose-1-phosphate aldolase;protein_id=WP_023232497.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 54727 55986 . - . ID=gene-SO06_RS15380;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=SO06_RS15380 NZ_MYDG01000011.1 Protein Homology CDS 54727 55986 . - 0 ID=cds-WP_000211470.1;Parent=gene-SO06_RS15380;Dbxref=GenBank:WP_000211470.1;Name=WP_000211470.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=SO06_RS15380;product=L-rhamnose isomerase;protein_id=WP_000211470.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 55983 57452 . - . ID=gene-SO06_RS15385;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=SO06_RS15385 NZ_MYDG01000011.1 Protein Homology CDS 55983 57452 . - 0 ID=cds-WP_000143959.1;Parent=gene-SO06_RS15385;Dbxref=GenBank:WP_000143959.1;Name=WP_000143959.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=SO06_RS15385;product=rhamnulokinase;protein_id=WP_000143959.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 57740 58576 . + . ID=gene-SO06_RS15390;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=SO06_RS15390 NZ_MYDG01000011.1 Protein Homology CDS 57740 58576 . + 0 ID=cds-WP_000217112.1;Parent=gene-SO06_RS15390;Dbxref=GenBank:WP_000217112.1;Name=WP_000217112.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=SO06_RS15390;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217112.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 58729 59577 . + . ID=gene-SO06_RS15395;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=SO06_RS15395 NZ_MYDG01000011.1 Protein Homology CDS 58729 59577 . + 0 ID=cds-WP_023232496.1;Parent=gene-SO06_RS15395;Dbxref=GenBank:WP_023232496.1;Name=WP_023232496.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=SO06_RS15395;product=HTH-type transcriptional activator RhaR;protein_id=WP_023232496.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 59574 60608 . - . ID=gene-SO06_RS15400;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=SO06_RS15400 NZ_MYDG01000011.1 Protein Homology CDS 59574 60608 . - 0 ID=cds-WP_000063541.1;Parent=gene-SO06_RS15400;Dbxref=GenBank:WP_000063541.1;Name=WP_000063541.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=SO06_RS15400;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063541.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 61227 61910 . + . ID=gene-SO06_RS15405;Name=SO06_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15405 NZ_MYDG01000011.1 Protein Homology CDS 61227 61910 . + 0 ID=cds-WP_000378721.1;Parent=gene-SO06_RS15405;Dbxref=GenBank:WP_000378721.1;Name=WP_000378721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=SO06_RS15405;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000378721.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 62068 63375 . - . ID=gene-SO06_RS15410;Name=SO06_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15410 NZ_MYDG01000011.1 Protein Homology CDS 62068 63375 . - 0 ID=cds-WP_000566800.1;Parent=gene-SO06_RS15410;Dbxref=GenBank:WP_000566800.1;Name=WP_000566800.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=SO06_RS15410;product=TRAP transporter large permease;protein_id=WP_000566800.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 63368 63883 . - . ID=gene-SO06_RS15415;Name=SO06_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15415 NZ_MYDG01000011.1 Protein Homology CDS 63368 63883 . - 0 ID=cds-WP_001091413.1;Parent=gene-SO06_RS15415;Dbxref=GenBank:WP_001091413.1;Name=WP_001091413.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=SO06_RS15415;product=TRAP transporter small permease;protein_id=WP_001091413.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 63902 64885 . - . ID=gene-SO06_RS15420;Name=SO06_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15420 NZ_MYDG01000011.1 Protein Homology CDS 63902 64885 . - 0 ID=cds-WP_000812816.1;Parent=gene-SO06_RS15420;Dbxref=GenBank:WP_000812816.1;Name=WP_000812816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=SO06_RS15420;product=TRAP transporter substrate-binding protein;protein_id=WP_000812816.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 65214 65834 . + . ID=gene-SO06_RS15425;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=SO06_RS15425 NZ_MYDG01000011.1 Protein Homology CDS 65214 65834 . + 0 ID=cds-WP_000122632.1;Parent=gene-SO06_RS15425;Dbxref=GenBank:WP_000122632.1;Name=WP_000122632.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=SO06_RS15425;product=superoxide dismutase [Mn];protein_id=WP_000122632.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 65904 66593 . + . ID=gene-SO06_RS15430;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=SO06_RS15430 NZ_MYDG01000011.1 Protein Homology CDS 65904 66593 . + 0 ID=cds-WP_023232495.1;Parent=gene-SO06_RS15430;Dbxref=GenBank:WP_023232495.1;Name=WP_023232495.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=SO06_RS15430;product=6-hydroxyaminopurine reductase;protein_id=WP_023232495.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 66605 67000 . + . ID=gene-SO06_RS15435;Name=SO06_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15435 NZ_MYDG01000011.1 Protein Homology CDS 66605 67000 . + 0 ID=cds-WP_023232494.1;Parent=gene-SO06_RS15435;Dbxref=GenBank:WP_023232494.1;Name=WP_023232494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=SO06_RS15435;product=nuclear transport factor 2 family protein;protein_id=WP_023232494.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 67121 67324 . + . ID=gene-SO06_RS15440;Name=SO06_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15440 NZ_MYDG01000011.1 Protein Homology CDS 67121 67324 . + 0 ID=cds-WP_023232493.1;Parent=gene-SO06_RS15440;Dbxref=GenBank:WP_023232493.1;Name=WP_023232493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338671.1;locus_tag=SO06_RS15440;product=hypothetical protein;protein_id=WP_023232493.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 67372 68745 . - . ID=gene-SO06_RS15445;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=SO06_RS15445 NZ_MYDG01000011.1 Protein Homology CDS 67372 68745 . - 0 ID=cds-WP_000580402.1;Parent=gene-SO06_RS15445;Dbxref=GenBank:WP_000580402.1;Name=WP_000580402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=SO06_RS15445;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580402.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 68742 69440 . - . ID=gene-SO06_RS15450;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=SO06_RS15450 NZ_MYDG01000011.1 Protein Homology CDS 68742 69440 . - 0 ID=cds-WP_001033731.1;Parent=gene-SO06_RS15450;Dbxref=GenBank:WP_001033731.1;Name=WP_001033731.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=SO06_RS15450;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033731.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 69591 70091 . + . ID=gene-SO06_RS15455;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=SO06_RS15455 NZ_MYDG01000011.1 Protein Homology CDS 69591 70091 . + 0 ID=cds-WP_001233463.1;Parent=gene-SO06_RS15455;Dbxref=GenBank:WP_001233463.1;Name=WP_001233463.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=SO06_RS15455;product=cell-envelope stress modulator CpxP;protein_id=WP_001233463.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 70239 71141 . + . ID=gene-SO06_RS15460;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=SO06_RS15460 NZ_MYDG01000011.1 Protein Homology CDS 70239 71141 . + 0 ID=cds-WP_001077321.1;Parent=gene-SO06_RS15460;Dbxref=GenBank:WP_001077321.1;Name=WP_001077321.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=SO06_RS15460;product=CDF family cation-efflux transporter FieF;protein_id=WP_001077321.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 71326 72288 . + . ID=gene-SO06_RS15465;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=SO06_RS15465 NZ_MYDG01000011.1 Protein Homology CDS 71326 72288 . + 0 ID=cds-WP_000591793.1;Parent=gene-SO06_RS15465;Dbxref=GenBank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=SO06_RS15465;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 72492 73481 . + . ID=gene-SO06_RS15470;Name=SO06_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15470 NZ_MYDG01000011.1 Protein Homology CDS 72492 73481 . + 0 ID=cds-WP_023232492.1;Parent=gene-SO06_RS15470;Dbxref=GenBank:WP_023232492.1;Name=WP_023232492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=SO06_RS15470;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_023232492.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 73582 74337 . + . ID=gene-SO06_RS15475;Name=SO06_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15475 NZ_MYDG01000011.1 Protein Homology CDS 73582 74337 . + 0 ID=cds-WP_023232491.1;Parent=gene-SO06_RS15475;Dbxref=GenBank:WP_023232491.1;Name=WP_023232491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=SO06_RS15475;product=CDP-diacylglycerol diphosphatase;protein_id=WP_023232491.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 74602 75936 . + . ID=gene-SO06_RS15480;Name=SO06_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15480 NZ_MYDG01000011.1 Protein Homology CDS 74602 75936 . + 0 ID=cds-WP_000777316.1;Parent=gene-SO06_RS15480;Dbxref=GenBank:WP_000777316.1;Name=WP_000777316.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=SO06_RS15480;product=MFS transporter;protein_id=WP_000777316.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 75947 76906 . + . ID=gene-SO06_RS15485;Name=SO06_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15485 NZ_MYDG01000011.1 Protein Homology CDS 75947 76906 . + 0 ID=cds-WP_080204263.1;Parent=gene-SO06_RS15485;Dbxref=GenBank:WP_080204263.1;Name=WP_080204263.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=SO06_RS15485;product=aminoimidazole riboside kinase;protein_id=WP_080204263.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 76916 77956 . + . ID=gene-SO06_RS15490;Name=SO06_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15490 NZ_MYDG01000011.1 Protein Homology CDS 76916 77956 . + 0 ID=cds-WP_023232489.1;Parent=gene-SO06_RS15490;Dbxref=GenBank:WP_023232489.1;Name=WP_023232489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=SO06_RS15490;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_023232489.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 78019 78741 . + . ID=gene-SO06_RS15495;Name=SO06_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15495 NZ_MYDG01000011.1 Protein Homology CDS 78019 78741 . + 0 ID=cds-WP_001533426.1;Parent=gene-SO06_RS15495;Dbxref=GenBank:WP_001533426.1;Name=WP_001533426.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=SO06_RS15495;product=GntR family transcriptional regulator;protein_id=WP_001533426.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 78839 80143 . + . ID=gene-SO06_RS15500;Name=SO06_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15500 NZ_MYDG01000011.1 Protein Homology CDS 78839 80143 . + 0 ID=cds-WP_023232488.1;Parent=gene-SO06_RS15500;Dbxref=GenBank:WP_023232488.1;Name=WP_023232488.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=SO06_RS15500;product=SLC13 family permease;protein_id=WP_023232488.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 80253 81020 . - . ID=gene-SO06_RS15505;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=SO06_RS15505 NZ_MYDG01000011.1 Protein Homology CDS 80253 81020 . - 0 ID=cds-WP_017441865.1;Parent=gene-SO06_RS15505;Dbxref=GenBank:WP_017441865.1;Name=WP_017441865.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=SO06_RS15505;product=triose-phosphate isomerase;protein_id=WP_017441865.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 81133 81729 . - . ID=gene-SO06_RS15510;Name=SO06_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15510 NZ_MYDG01000011.1 Protein Homology CDS 81133 81729 . - 0 ID=cds-WP_020437542.1;Parent=gene-SO06_RS15510;Dbxref=GenBank:WP_020437542.1;Name=WP_020437542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=SO06_RS15510;product=YiiQ family protein;protein_id=WP_020437542.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 81830 82258 . + . ID=gene-SO06_RS15515;Name=SO06_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15515 NZ_MYDG01000011.1 Protein Homology CDS 81830 82258 . + 0 ID=cds-WP_000155239.1;Parent=gene-SO06_RS15515;Dbxref=GenBank:WP_000155239.1;Name=WP_000155239.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462964.1;locus_tag=SO06_RS15515;product=DUF805 domain-containing protein;protein_id=WP_000155239.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 82365 83111 . - . ID=gene-SO06_RS15520;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=SO06_RS15520 NZ_MYDG01000011.1 Protein Homology CDS 82365 83111 . - 0 ID=cds-WP_023232487.1;Parent=gene-SO06_RS15520;Dbxref=GenBank:WP_023232487.1;Name=WP_023232487.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=SO06_RS15520;product=ferredoxin--NADP(+) reductase;protein_id=WP_023232487.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 83208 84218 . - . ID=gene-SO06_RS15525;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=SO06_RS15525 NZ_MYDG01000011.1 Protein Homology CDS 83208 84218 . - 0 ID=cds-WP_023232486.1;Parent=gene-SO06_RS15525;Dbxref=GenBank:WP_023232486.1;Name=WP_023232486.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=SO06_RS15525;product=class II fructose-bisphosphatase;protein_id=WP_023232486.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 84330 85838 . - . ID=gene-SO06_RS15530;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=SO06_RS15530 NZ_MYDG01000011.1 Protein Homology CDS 84330 85838 . - 0 ID=cds-WP_000136811.1;Parent=gene-SO06_RS15530;Dbxref=GenBank:WP_000136811.1;Name=WP_000136811.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=SO06_RS15530;product=glycerol kinase GlpK;protein_id=WP_000136811.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 85859 86704 . - . ID=gene-SO06_RS15535;Name=SO06_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15535 NZ_MYDG01000011.1 Protein Homology CDS 85859 86704 . - 0 ID=cds-WP_000084285.1;Parent=gene-SO06_RS15535;Dbxref=GenBank:WP_000084285.1;Name=WP_000084285.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=SO06_RS15535;product=MIP/aquaporin family protein;protein_id=WP_000084285.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 87103 87342 . + . ID=gene-SO06_RS15540;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=SO06_RS15540 NZ_MYDG01000011.1 Protein Homology CDS 87103 87342 . + 0 ID=cds-WP_000051370.1;Parent=gene-SO06_RS15540;Dbxref=GenBank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=SO06_RS15540;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 87564 88049 . - . ID=gene-SO06_RS15545;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=SO06_RS15545 NZ_MYDG01000011.1 Protein Homology CDS 87564 88049 . - 0 ID=cds-WP_000872918.1;Parent=gene-SO06_RS15545;Dbxref=GenBank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=SO06_RS15545;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 88142 89071 . - . ID=gene-SO06_RS15550;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=SO06_RS15550 NZ_MYDG01000011.1 Protein Homology CDS 88142 89071 . - 0 ID=cds-WP_000139639.1;Parent=gene-SO06_RS15550;Dbxref=GenBank:WP_000139639.1;Name=WP_000139639.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=SO06_RS15550;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139639.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 89138 90469 . - . ID=gene-SO06_RS15555;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=SO06_RS15555 NZ_MYDG01000011.1 Protein Homology CDS 89138 90469 . - 0 ID=cds-WP_001293360.1;Parent=gene-SO06_RS15555;Dbxref=GenBank:WP_001293360.1;Name=WP_001293360.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=SO06_RS15555;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293360.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 90479 91009 . - . ID=gene-SO06_RS15560;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=SO06_RS15560 NZ_MYDG01000011.1 Protein Homology CDS 90479 91009 . - 0 ID=cds-WP_000208240.1;Parent=gene-SO06_RS15560;Dbxref=GenBank:WP_000208240.1;Name=WP_000208240.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=SO06_RS15560;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 91101 92111 . - . ID=gene-SO06_RS15565;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=SO06_RS15565 NZ_MYDG01000011.1 Protein Homology CDS 91101 92111 . - 0 ID=cds-WP_079785642.1;Parent=gene-SO06_RS15565;Dbxref=GenBank:WP_079785642.1;Name=WP_079785642.1;Ontology_term=GO:0000910,GO:0005515;gbkey=CDS;gene=ftsN;go_function=protein binding|0005515||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=SO06_RS15565;product=cell division protein FtsN;protein_id=WP_079785642.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 92205 93230 . - . ID=gene-SO06_RS15570;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=SO06_RS15570 NZ_MYDG01000011.1 Protein Homology CDS 92205 93230 . - 0 ID=cds-WP_000841337.1;Parent=gene-SO06_RS15570;Dbxref=GenBank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=SO06_RS15570;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 93385 95583 . - . ID=gene-SO06_RS15575;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=SO06_RS15575 NZ_MYDG01000011.1 Protein Homology CDS 93385 95583 . - 0 ID=cds-WP_000109392.1;Parent=gene-SO06_RS15575;Dbxref=GenBank:WP_000109392.1;Name=WP_000109392.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=SO06_RS15575;product=primosomal protein N';protein_id=WP_000109392.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 95787 95999 . + . ID=gene-SO06_RS15580;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=SO06_RS15580 NZ_MYDG01000011.1 Protein Homology CDS 95787 95999 . + 0 ID=cds-WP_000715284.1;Parent=gene-SO06_RS15580;Dbxref=GenBank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=SO06_RS15580;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11 NZ_MYDG01000011.1 RefSeq pseudogene 96279 96392 . + . ID=gene-SO06_RS25805;Name=SO06_RS25805;end_range=96392,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25805;partial=true;pseudo=true NZ_MYDG01000011.1 Protein Homology CDS 96279 96392 . + 0 ID=cds-SO06_RS25805;Parent=gene-SO06_RS25805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=96392,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=SO06_RS25805;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 96995 98785 . - . ID=gene-SO06_RS15595;Name=SO06_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15595 NZ_MYDG01000011.1 Protein Homology CDS 96995 98785 . - 0 ID=cds-WP_000899644.1;Parent=gene-SO06_RS15595;Dbxref=GenBank:WP_000899644.1;Name=WP_000899644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=SO06_RS15595;product=aryl-sulfate sulfotransferase;protein_id=WP_000899644.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 99242 99559 . - . ID=gene-SO06_RS15600;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=SO06_RS15600 NZ_MYDG01000011.1 Protein Homology CDS 99242 99559 . - 0 ID=cds-WP_000852811.1;Parent=gene-SO06_RS15600;Dbxref=GenBank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=SO06_RS15600;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 99824 100984 . + . ID=gene-SO06_RS15605;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=SO06_RS15605 NZ_MYDG01000011.1 Protein Homology CDS 99824 100984 . + 0 ID=cds-WP_000197213.1;Parent=gene-SO06_RS15605;Dbxref=GenBank:WP_000197213.1;Name=WP_000197213.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=SO06_RS15605;product=cystathionine gamma-synthase;protein_id=WP_000197213.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 100987 103419 . + . ID=gene-SO06_RS15610;Name=SO06_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15610 NZ_MYDG01000011.1 Protein Homology CDS 100987 103419 . + 0 ID=cds-WP_000110805.1;Parent=gene-SO06_RS15610;Dbxref=GenBank:WP_000110805.1;Name=WP_000110805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=SO06_RS15610;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110805.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 103535 104392 . - . ID=gene-SO06_RS15615;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=SO06_RS15615 NZ_MYDG01000011.1 Protein Homology CDS 103535 104392 . - 0 ID=cds-WP_000398251.1;Parent=gene-SO06_RS15615;Dbxref=GenBank:WP_000398251.1;Name=WP_000398251.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=SO06_RS15615;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000398251.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 104395 105393 . - . ID=gene-SO06_RS15620;Name=SO06_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15620 NZ_MYDG01000011.1 Protein Homology CDS 104395 105393 . - 0 ID=cds-WP_023232484.1;Parent=gene-SO06_RS15620;Dbxref=GenBank:WP_023232484.1;Name=WP_023232484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=SO06_RS15620;product=hypothetical protein;protein_id=WP_023232484.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 105628 106752 . - . ID=gene-SO06_RS15625;Name=SO06_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15625 NZ_MYDG01000011.1 Protein Homology CDS 105628 106752 . - 0 ID=cds-WP_023232483.1;Parent=gene-SO06_RS15625;Dbxref=GenBank:WP_023232483.1;Name=WP_023232483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=SO06_RS15625;product=hypothetical protein;protein_id=WP_023232483.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 106888 108444 . + . ID=gene-SO06_RS15630;Name=SO06_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15630 NZ_MYDG01000011.1 Protein Homology CDS 106888 108444 . + 0 ID=cds-WP_023232482.1;Parent=gene-SO06_RS15630;Dbxref=GenBank:WP_023232482.1;Name=WP_023232482.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=SO06_RS15630;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_023232482.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 108639 109529 . + . ID=gene-SO06_RS15635;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=SO06_RS15635 NZ_MYDG01000011.1 Protein Homology CDS 108639 109529 . + 0 ID=cds-WP_000007508.1;Parent=gene-SO06_RS15635;Dbxref=GenBank:WP_000007508.1;Name=WP_000007508.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=SO06_RS15635;product=methylenetetrahydrofolate reductase;protein_id=WP_000007508.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 109694 111874 . + . ID=gene-SO06_RS15640;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=SO06_RS15640 NZ_MYDG01000011.1 Protein Homology CDS 109694 111874 . + 0 ID=cds-WP_000108105.1;Parent=gene-SO06_RS15640;Dbxref=GenBank:WP_000108105.1;Name=WP_000108105.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=SO06_RS15640;product=catalase/peroxidase HPI;protein_id=WP_000108105.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 111932 112555 . - . ID=gene-SO06_RS15645;Name=SO06_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15645 NZ_MYDG01000011.1 Protein Homology CDS 111932 112555 . - 0 ID=cds-WP_000666688.1;Parent=gene-SO06_RS15645;Dbxref=GenBank:WP_000666688.1;Name=WP_000666688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=SO06_RS15645;product=DUF1287 domain-containing protein;protein_id=WP_000666688.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 112814 113917 . - . ID=gene-SO06_RS15650;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=SO06_RS15650 NZ_MYDG01000011.1 Protein Homology CDS 112814 113917 . - 0 ID=cds-WP_000374041.1;Parent=gene-SO06_RS15650;Dbxref=GenBank:WP_000374041.1;Name=WP_000374041.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=SO06_RS15650;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374041.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 113929 114591 . - . ID=gene-SO06_RS15655;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=SO06_RS15655 NZ_MYDG01000011.1 Protein Homology CDS 113929 114591 . - 0 ID=cds-WP_000424866.1;Parent=gene-SO06_RS15655;Dbxref=GenBank:WP_000424866.1;Name=WP_000424866.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=SO06_RS15655;product=fructose-6-phosphate aldolase;protein_id=WP_000424866.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 114846 115682 . - . ID=gene-SO06_RS15660;Name=SO06_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15660 NZ_MYDG01000011.1 Protein Homology CDS 114846 115682 . - 0 ID=cds-WP_048348794.1;Parent=gene-SO06_RS15660;Dbxref=GenBank:WP_048348794.1;Name=WP_048348794.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506508.1;locus_tag=SO06_RS15660;product=helix-turn-helix transcriptional regulator;protein_id=WP_048348794.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 115843 117576 . - . ID=gene-SO06_RS15665;Name=SO06_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15665 NZ_MYDG01000011.1 Protein Homology CDS 115843 117576 . - 0 ID=cds-WP_023232572.1;Parent=gene-SO06_RS15665;Dbxref=GenBank:WP_023232572.1;Name=WP_023232572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=SO06_RS15665;product=phosphoethanolamine transferase CptA;protein_id=WP_023232572.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 117787 120438 . - . ID=gene-SO06_RS15670;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=SO06_RS15670 NZ_MYDG01000011.1 Protein Homology CDS 117787 120438 . - 0 ID=cds-WP_001005548.1;Parent=gene-SO06_RS15670;Dbxref=GenBank:WP_001005548.1;Name=WP_001005548.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=SO06_RS15670;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005548.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 120830 121981 . - . ID=gene-SO06_RS15675;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=SO06_RS15675 NZ_MYDG01000011.1 Protein Homology CDS 120830 121981 . - 0 ID=cds-WP_000800208.1;Parent=gene-SO06_RS15675;Dbxref=GenBank:WP_000800208.1;Name=WP_000800208.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=SO06_RS15675;product=acetylornithine deacetylase;protein_id=WP_000800208.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 122070 123074 . + . ID=gene-SO06_RS15680;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=SO06_RS15680 NZ_MYDG01000011.1 Protein Homology CDS 122070 123074 . + 0 ID=cds-WP_000935332.1;Parent=gene-SO06_RS15680;Dbxref=GenBank:WP_000935332.1;Name=WP_000935332.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=SO06_RS15680;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935332.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 123082 123858 . + . ID=gene-SO06_RS15685;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=SO06_RS15685 NZ_MYDG01000011.1 Protein Homology CDS 123082 123858 . + 0 ID=cds-WP_001575262.1;Parent=gene-SO06_RS15685;Dbxref=GenBank:WP_001575262.1;Name=WP_001575262.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=SO06_RS15685;product=acetylglutamate kinase;protein_id=WP_001575262.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 123976 125352 . + . ID=gene-SO06_RS15690;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=SO06_RS15690 NZ_MYDG01000011.1 Protein Homology CDS 123976 125352 . + 0 ID=cds-WP_023232573.1;Parent=gene-SO06_RS15690;Dbxref=GenBank:WP_023232573.1;Name=WP_023232573.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=SO06_RS15690;product=argininosuccinate lyase;protein_id=WP_023232573.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 125635 126552 . + . ID=gene-SO06_RS15700;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=SO06_RS15700 NZ_MYDG01000011.1 Protein Homology CDS 125635 126552 . + 0 ID=cds-WP_001025919.1;Parent=gene-SO06_RS15700;Dbxref=GenBank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=SO06_RS15700;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 126535 127935 . - . ID=gene-SO06_RS15705;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=SO06_RS15705 NZ_MYDG01000011.1 Protein Homology CDS 126535 127935 . - 0 ID=cds-WP_001120789.1;Parent=gene-SO06_RS15705;Dbxref=GenBank:WP_001120789.1;Name=WP_001120789.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=SO06_RS15705;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120789.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 128134 128769 . + . ID=gene-SO06_RS15715;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=SO06_RS15715 NZ_MYDG01000011.1 Protein Homology CDS 128134 128769 . + 0 ID=cds-WP_000971958.1;Parent=gene-SO06_RS15715;Dbxref=GenBank:WP_000971958.1;Name=WP_000971958.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=SO06_RS15715;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 128785 129144 . + . ID=gene-SO06_RS15720;Name=SO06_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15720 NZ_MYDG01000011.1 Protein Homology CDS 128785 129144 . + 0 ID=cds-WP_000813838.1;Parent=gene-SO06_RS15720;Dbxref=GenBank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=SO06_RS15720;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 129191 130291 . - . ID=gene-SO06_RS15725;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=SO06_RS15725 NZ_MYDG01000011.1 Protein Homology CDS 129191 130291 . - 0 ID=cds-WP_023232574.1;Parent=gene-SO06_RS15725;Dbxref=GenBank:WP_023232574.1;Name=WP_023232574.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=SO06_RS15725;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_023232574.1;transl_table=11 NZ_MYDG01000011.1 cmsearch riboswitch 130406 130598 . + . ID=id-NZ_MYDG01000011.1:130406..130598;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_MYDG01000011.1 RefSeq gene 130665 132521 . + . ID=gene-SO06_RS15730;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=SO06_RS15730 NZ_MYDG01000011.1 Protein Homology CDS 130665 132521 . + 0 ID=cds-WP_023232575.1;Parent=gene-SO06_RS15730;Dbxref=GenBank:WP_023232575.1;Name=WP_023232575.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224408.1;locus_tag=SO06_RS15730;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_023232575.1;transl_table=11 NZ_MYDG01000011.1 RefSeq gene 132466 133317 . + . ID=gene-SO06_RS15735;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=SO06_RS15735 NZ_MYDG01000011.1 Protein Homology CDS 132466 133317 . + 0 ID=cds-WP_023232576.1;Parent=gene-SO06_RS15735;Dbxref=GenBank:WP_023232576.1;Name=WP_023232576.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=SO06_RS15735;product=glutamate racemase;protein_id=WP_023232576.1;transl_table=11 ##sequence-region NZ_MYDG01000012.1 1 132666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000012.1 RefSeq region 1 132666 . + . ID=NZ_MYDG01000012.1:1..132666;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000012.1 RefSeq gene 1 5273 . + . ID=gene-SO06_RS15740;Name=SO06_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15740;partial=true;start_range=.,1 NZ_MYDG01000012.1 Protein Homology CDS 1 5273 . + 2 ID=cds-WP_080204264.1;Parent=gene-SO06_RS15740;Dbxref=GenBank:WP_080204264.1;Name=WP_080204264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747946.1;locus_tag=SO06_RS15740;partial=true;product=autotransporter domain-containing protein;protein_id=WP_080204264.1;start_range=.,1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 5466 5636 . + . ID=gene-SO06_RS15745;Name=SO06_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15745 NZ_MYDG01000012.1 Protein Homology CDS 5466 5636 . + 0 ID=cds-WP_000472323.1;Parent=gene-SO06_RS15745;Dbxref=GenBank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=SO06_RS15745;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 5781 6785 . - . ID=gene-SO06_RS15750;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=SO06_RS15750 NZ_MYDG01000012.1 Protein Homology CDS 5781 6785 . - 0 ID=cds-WP_000165562.1;Parent=gene-SO06_RS15750;Dbxref=GenBank:WP_000165562.1;Name=WP_000165562.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=SO06_RS15750;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 6778 7536 . - . ID=gene-SO06_RS15755;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=SO06_RS15755 NZ_MYDG01000012.1 Protein Homology CDS 6778 7536 . - 0 ID=cds-WP_080204265.1;Parent=gene-SO06_RS15755;Dbxref=GenBank:WP_080204265.1;Name=WP_080204265.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=SO06_RS15755;product=phosphoglycolate phosphatase;protein_id=WP_080204265.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 7529 8206 . - . ID=gene-SO06_RS15760;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=SO06_RS15760 NZ_MYDG01000012.1 Protein Homology CDS 7529 8206 . - 0 ID=cds-WP_000816283.1;Parent=gene-SO06_RS15760;Dbxref=GenBank:WP_000816283.1;Name=WP_000816283.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=SO06_RS15760;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816283.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 8224 9060 . - . ID=gene-SO06_RS15765;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=SO06_RS15765 NZ_MYDG01000012.1 Protein Homology CDS 8224 9060 . - 0 ID=cds-WP_039590898.1;Parent=gene-SO06_RS15765;Dbxref=GenBank:WP_039590898.1;Name=WP_039590898.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=SO06_RS15765;product=adenine-specific DNA-methyltransferase;protein_id=WP_039590898.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 9241 10518 . - . ID=gene-SO06_RS15770;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=SO06_RS15770 NZ_MYDG01000012.1 Protein Homology CDS 9241 10518 . - 0 ID=cds-WP_080204266.1;Parent=gene-SO06_RS15770;Dbxref=GenBank:WP_080204266.1;Name=WP_080204266.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=SO06_RS15770;product=cell division protein DamX;protein_id=WP_080204266.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 10616 11704 . - . ID=gene-SO06_RS15775;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=SO06_RS15775 NZ_MYDG01000012.1 Protein Homology CDS 10616 11704 . - 0 ID=cds-WP_000439824.1;Parent=gene-SO06_RS15775;Dbxref=GenBank:WP_000439824.1;Name=WP_000439824.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=SO06_RS15775;product=3-dehydroquinate synthase;protein_id=WP_000439824.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 11761 12282 . - . ID=gene-SO06_RS15780;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=SO06_RS15780 NZ_MYDG01000012.1 Protein Homology CDS 11761 12282 . - 0 ID=cds-WP_000818621.1;Parent=gene-SO06_RS15780;Dbxref=GenBank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=SO06_RS15780;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 12747 13985 . - . ID=gene-SO06_RS15790;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=SO06_RS15790 NZ_MYDG01000012.1 Protein Homology CDS 12747 13985 . - 0 ID=cds-WP_023232579.1;Parent=gene-SO06_RS15790;Dbxref=GenBank:WP_023232579.1;Name=WP_023232579.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=SO06_RS15790;product=DNA uptake porin HofQ;protein_id=WP_023232579.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 13900 14301 . - . ID=gene-SO06_RS15795;Name=SO06_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15795 NZ_MYDG01000012.1 Protein Homology CDS 13900 14301 . - 0 ID=cds-WP_000868832.1;Parent=gene-SO06_RS15795;Dbxref=GenBank:WP_000868832.1;Name=WP_000868832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=SO06_RS15795;product=HofP DNA utilization family protein;protein_id=WP_000868832.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 14291 14764 . - . ID=gene-SO06_RS15800;Name=SO06_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15800 NZ_MYDG01000012.1 Protein Homology CDS 14291 14764 . - 0 ID=cds-WP_023232580.1;Parent=gene-SO06_RS15800;Dbxref=GenBank:WP_023232580.1;Name=WP_023232580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=SO06_RS15800;product=HofO family protein;protein_id=WP_023232580.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 14748 15287 . - . ID=gene-SO06_RS15805;Name=SO06_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15805 NZ_MYDG01000012.1 Protein Homology CDS 14748 15287 . - 0 ID=cds-WP_023232581.1;Parent=gene-SO06_RS15805;Dbxref=GenBank:WP_023232581.1;Name=WP_023232581.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=SO06_RS15805;product=PilN domain-containing protein;protein_id=WP_023232581.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 15287 16066 . - . ID=gene-SO06_RS15810;Name=SO06_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15810 NZ_MYDG01000012.1 Protein Homology CDS 15287 16066 . - 0 ID=cds-WP_023202839.1;Parent=gene-SO06_RS15810;Dbxref=GenBank:WP_023202839.1;Name=WP_023202839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=SO06_RS15810;product=hypothetical protein;protein_id=WP_023202839.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 16187 18739 . + . ID=gene-SO06_RS15815;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=SO06_RS15815 NZ_MYDG01000012.1 Protein Homology CDS 16187 18739 . + 0 ID=cds-WP_058647579.1;Parent=gene-SO06_RS15815;Dbxref=GenBank:WP_058647579.1;Name=WP_058647579.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=SO06_RS15815;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_058647579.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 18835 19398 . - . ID=gene-SO06_RS15820;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=SO06_RS15820 NZ_MYDG01000012.1 Protein Homology CDS 18835 19398 . - 0 ID=cds-WP_023176215.1;Parent=gene-SO06_RS15820;Dbxref=GenBank:WP_023176215.1;Name=WP_023176215.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=SO06_RS15820;product=ADP compounds hydrolase NudE;protein_id=WP_023176215.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 19721 21853 . + . ID=gene-SO06_RS15825;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=SO06_RS15825 NZ_MYDG01000012.1 Protein Homology CDS 19721 21853 . + 0 ID=cds-WP_000104092.1;Parent=gene-SO06_RS15825;Dbxref=GenBank:WP_000104092.1;Name=WP_000104092.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=SO06_RS15825;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104092.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 21918 22586 . + . ID=gene-SO06_RS15830;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=SO06_RS15830 NZ_MYDG01000012.1 Protein Homology CDS 21918 22586 . + 0 ID=cds-WP_023193854.1;Parent=gene-SO06_RS15830;Dbxref=GenBank:WP_023193854.1;Name=WP_023193854.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006893127.1;locus_tag=SO06_RS15830;product=GMP/IMP nucleotidase;protein_id=WP_023193854.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 22597 22998 . + . ID=gene-SO06_RS15835;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=SO06_RS15835 NZ_MYDG01000012.1 Protein Homology CDS 22597 22998 . + 0 ID=cds-WP_000660719.1;Parent=gene-SO06_RS15835;Dbxref=GenBank:WP_000660719.1;Name=WP_000660719.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=SO06_RS15835;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660719.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 23023 23901 . + . ID=gene-SO06_RS15840;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=SO06_RS15840 NZ_MYDG01000012.1 Protein Homology CDS 23023 23901 . + 0 ID=cds-WP_001673738.1;Parent=gene-SO06_RS15840;Dbxref=GenBank:WP_001673738.1;Name=WP_001673738.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=SO06_RS15840;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001673738.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 24012 25721 . - . ID=gene-SO06_RS15845;Name=SO06_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15845 NZ_MYDG01000012.1 Protein Homology CDS 24012 25721 . - 0 ID=cds-WP_021294262.1;Parent=gene-SO06_RS15845;Dbxref=GenBank:WP_021294262.1;Name=WP_021294262.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=SO06_RS15845;product=DUF4153 domain-containing protein;protein_id=WP_021294262.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 26101 27720 . + . ID=gene-SO06_RS15850;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=SO06_RS15850 NZ_MYDG01000012.1 Protein Homology CDS 26101 27720 . + 0 ID=cds-WP_001265689.1;Parent=gene-SO06_RS15850;Dbxref=GenBank:WP_001265689.1;Name=WP_001265689.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=SO06_RS15850;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265689.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 27795 29147 . - . ID=gene-SO06_RS15855;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=SO06_RS15855 NZ_MYDG01000012.1 Protein Homology CDS 27795 29147 . - 0 ID=cds-WP_001253818.1;Parent=gene-SO06_RS15855;Dbxref=GenBank:WP_001253818.1;Name=WP_001253818.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=SO06_RS15855;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253818.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 29144 29863 . - . ID=gene-SO06_RS15860;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=SO06_RS15860 NZ_MYDG01000012.1 Protein Homology CDS 29144 29863 . - 0 ID=cds-WP_001157751.1;Parent=gene-SO06_RS15860;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=SO06_RS15860;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 30089 30562 . + . ID=gene-SO06_RS15865;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=SO06_RS15865 NZ_MYDG01000012.1 Protein Homology CDS 30089 30562 . + 0 ID=cds-WP_000856695.1;Parent=gene-SO06_RS15865;Dbxref=GenBank:WP_000856695.1;Name=WP_000856695.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=SO06_RS15865;product=transcription elongation factor GreB;protein_id=WP_000856695.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 30661 32991 . + . ID=gene-SO06_RS15870;Name=SO06_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15870 NZ_MYDG01000012.1 Protein Homology CDS 30661 32991 . + 0 ID=cds-WP_023231795.1;Parent=gene-SO06_RS15870;Dbxref=GenBank:WP_023231795.1;Name=WP_023231795.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=SO06_RS15870;product=Tex family protein;protein_id=WP_023231795.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 33428 33655 . + . ID=gene-SO06_RS15880;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=SO06_RS15880 NZ_MYDG01000012.1 Protein Homology CDS 33428 33655 . + 0 ID=cds-WP_001160955.1;Parent=gene-SO06_RS15880;Dbxref=GenBank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=SO06_RS15880;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 33674 35992 . + . ID=gene-SO06_RS15885;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=SO06_RS15885 NZ_MYDG01000012.1 Protein Homology CDS 33674 35992 . + 0 ID=cds-WP_000736973.1;Parent=gene-SO06_RS15885;Dbxref=GenBank:WP_000736973.1;Name=WP_000736973.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=SO06_RS15885;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000736973.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 36005 36241 . + . ID=gene-SO06_RS15890;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=SO06_RS15890 NZ_MYDG01000012.1 Protein Homology CDS 36005 36241 . + 0 ID=cds-WP_000157590.1;Parent=gene-SO06_RS15890;Dbxref=GenBank:WP_000157590.1;Name=WP_000157590.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=SO06_RS15890;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157590.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 36476 37390 . + . ID=gene-SO06_RS15895;Name=SO06_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15895 NZ_MYDG01000012.1 Protein Homology CDS 36476 37390 . + 0 ID=cds-WP_000235955.1;Parent=gene-SO06_RS15895;Dbxref=GenBank:WP_000235955.1;Name=WP_000235955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=SO06_RS15895;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000235955.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 37426 38196 . - . ID=gene-SO06_RS15900;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=SO06_RS15900 NZ_MYDG01000012.1 Protein Homology CDS 37426 38196 . - 0 ID=cds-WP_000998146.1;Parent=gene-SO06_RS15900;Dbxref=GenBank:WP_000998146.1;Name=WP_000998146.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=SO06_RS15900;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998146.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 38234 38917 . + . ID=gene-SO06_RS15905;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=SO06_RS15905 NZ_MYDG01000012.1 Protein Homology CDS 38234 38917 . + 0 ID=cds-WP_000958732.1;Parent=gene-SO06_RS15905;Dbxref=GenBank:WP_000958732.1;Name=WP_000958732.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=SO06_RS15905;product=DNA utilization protein GntX;protein_id=WP_000958732.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 38976 39551 . + . ID=gene-SO06_RS15910;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=SO06_RS15910 NZ_MYDG01000012.1 Protein Homology CDS 38976 39551 . + 0 ID=cds-WP_000619387.1;Parent=gene-SO06_RS15910;Dbxref=GenBank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=SO06_RS15910;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 39928 41244 . + . ID=gene-SO06_RS15915;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=SO06_RS15915 NZ_MYDG01000012.1 Protein Homology CDS 39928 41244 . + 0 ID=cds-WP_001131741.1;Parent=gene-SO06_RS15915;Dbxref=GenBank:WP_001131741.1;Name=WP_001131741.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=SO06_RS15915;product=gluconate transporter;protein_id=WP_001131741.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 41363 43441 . - . ID=gene-SO06_RS15920;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=SO06_RS15920 NZ_MYDG01000012.1 Protein Homology CDS 41363 43441 . - 0 ID=cds-WP_023231796.1;Parent=gene-SO06_RS15920;Dbxref=GenBank:WP_023231796.1;Name=WP_023231796.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=SO06_RS15920;product=4-alpha-glucanotransferase;protein_id=WP_023231796.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 43451 45844 . - . ID=gene-SO06_RS15925;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=SO06_RS15925 NZ_MYDG01000012.1 Protein Homology CDS 43451 45844 . - 0 ID=cds-WP_023231797.1;Parent=gene-SO06_RS15925;Dbxref=GenBank:WP_023231797.1;Name=WP_023231797.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=SO06_RS15925;product=maltodextrin phosphorylase;protein_id=WP_023231797.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 46439 49144 . + . ID=gene-SO06_RS15930;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=SO06_RS15930 NZ_MYDG01000012.1 Protein Homology CDS 46439 49144 . + 0 ID=cds-WP_000907030.1;Parent=gene-SO06_RS15930;Dbxref=GenBank:WP_000907030.1;Name=WP_000907030.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=SO06_RS15930;product=HTH-type transcriptional regulator MalT;protein_id=WP_000907030.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 49232 49507 . - . ID=gene-SO06_RS15935;Name=SO06_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15935 NZ_MYDG01000012.1 Protein Homology CDS 49232 49507 . - 0 ID=cds-WP_023231798.1;Parent=gene-SO06_RS15935;Dbxref=GenBank:WP_023231798.1;Name=WP_023231798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462419.1;locus_tag=SO06_RS15935;product=type II toxin-antitoxin system YafQ family toxin;protein_id=WP_023231798.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 49510 49770 . - . ID=gene-SO06_RS15940;Name=SO06_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15940 NZ_MYDG01000012.1 Protein Homology CDS 49510 49770 . - 0 ID=cds-WP_000729714.1;Parent=gene-SO06_RS15940;Dbxref=GenBank:WP_000729714.1;Name=WP_000729714.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462420.1;locus_tag=SO06_RS15940;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000729714.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 49879 50898 . - . ID=gene-SO06_RS15945;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=SO06_RS15945 NZ_MYDG01000012.1 Protein Homology CDS 49879 50898 . - 0 ID=cds-WP_023231799.1;Parent=gene-SO06_RS15945;Dbxref=GenBank:WP_023231799.1;Name=WP_023231799.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462421.1;locus_tag=SO06_RS15945;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_023231799.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 50902 52116 . - . ID=gene-SO06_RS15950;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=SO06_RS15950 NZ_MYDG01000012.1 Protein Homology CDS 50902 52116 . - 0 ID=cds-WP_052895236.1;Parent=gene-SO06_RS15950;Dbxref=GenBank:WP_052895236.1;Name=WP_052895236.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=SO06_RS15950;product=RNA-splicing ligase RtcB;protein_id=WP_052895236.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 52464 54017 . - . ID=gene-SO06_RS15955;Name=SO06_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15955 NZ_MYDG01000012.1 Protein Homology CDS 52464 54017 . - 0 ID=cds-WP_023231801.1;Parent=gene-SO06_RS15955;Dbxref=GenBank:WP_023231801.1;Name=WP_023231801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=SO06_RS15955;product=vWA domain-containing protein;protein_id=WP_023231801.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 54207 55790 . + . ID=gene-SO06_RS15960;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=SO06_RS15960 NZ_MYDG01000012.1 Protein Homology CDS 54207 55790 . + 0 ID=cds-WP_001232871.1;Parent=gene-SO06_RS15960;Dbxref=GenBank:WP_001232871.1;Name=WP_001232871.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=SO06_RS15960;product=RNA repair transcriptional activator RtcR;protein_id=WP_001232871.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 55787 56545 . - . ID=gene-SO06_RS15965;Name=SO06_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15965 NZ_MYDG01000012.1 Protein Homology CDS 55787 56545 . - 0 ID=cds-WP_000815085.1;Parent=gene-SO06_RS15965;Dbxref=GenBank:WP_000815085.1;Name=WP_000815085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=SO06_RS15965;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815085.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 56639 57469 . - . ID=gene-SO06_RS15970;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=SO06_RS15970 NZ_MYDG01000012.1 Protein Homology CDS 56639 57469 . - 0 ID=cds-WP_000928698.1;Parent=gene-SO06_RS15970;Dbxref=GenBank:WP_000928698.1;Name=WP_000928698.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=SO06_RS15970;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928698.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 57545 57871 . - . ID=gene-SO06_RS15975;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=SO06_RS15975 NZ_MYDG01000012.1 Protein Homology CDS 57545 57871 . - 0 ID=cds-WP_000434523.1;Parent=gene-SO06_RS15975;Dbxref=GenBank:WP_000434523.1;Name=WP_000434523.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=SO06_RS15975;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434523.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 58070 59578 . + . ID=gene-SO06_RS15980;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=SO06_RS15980 NZ_MYDG01000012.1 Protein Homology CDS 58070 59578 . + 0 ID=cds-WP_080204267.1;Parent=gene-SO06_RS15980;Dbxref=GenBank:WP_080204267.1;Name=WP_080204267.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=SO06_RS15980;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_080204267.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 59626 60171 . - . ID=gene-SO06_RS15985;Name=SO06_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15985 NZ_MYDG01000012.1 Protein Homology CDS 59626 60171 . - 0 ID=cds-WP_000390366.1;Parent=gene-SO06_RS15985;Dbxref=GenBank:WP_000390366.1;Name=WP_000390366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=SO06_RS15985;product=hypothetical protein;protein_id=WP_000390366.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 60181 61677 . - . ID=gene-SO06_RS15990;Name=SO06_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15990 NZ_MYDG01000012.1 Protein Homology CDS 60181 61677 . - 0 ID=cds-WP_223135275.1;Parent=gene-SO06_RS15990;Dbxref=GenBank:WP_223135275.1;Name=WP_223135275.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786181.1;locus_tag=SO06_RS15990;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_223135275.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 61835 62944 . - . ID=gene-SO06_RS15995;Name=SO06_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS15995 NZ_MYDG01000012.1 Protein Homology CDS 61835 62944 . - 0 ID=cds-WP_000258842.1;Parent=gene-SO06_RS15995;Dbxref=GenBank:WP_000258842.1;Name=WP_000258842.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462431.1;locus_tag=SO06_RS15995;product=glycerol dehydrogenase;protein_id=WP_000258842.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 63284 64618 . + . ID=gene-SO06_RS16000;Name=SO06_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16000 NZ_MYDG01000012.1 Protein Homology CDS 63284 64618 . + 0 ID=cds-WP_001518078.1;Parent=gene-SO06_RS16000;Dbxref=GenBank:WP_001518078.1;Name=WP_001518078.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=SO06_RS16000;product=MFS transporter;protein_id=WP_001518078.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 64615 66330 . + . ID=gene-SO06_RS16005;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=SO06_RS16005 NZ_MYDG01000012.1 Protein Homology CDS 64615 66330 . + 0 ID=cds-WP_000078496.1;Parent=gene-SO06_RS16005;Dbxref=GenBank:WP_000078496.1;Name=WP_000078496.1;Ontology_term=GO:0009097,GO:0009099,GO:0000287,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=magnesium ion binding|0000287||IEA,dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,L-valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=SO06_RS16005;product=dihydroxy-acid dehydratase;protein_id=WP_000078496.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 66374 67279 . + . ID=gene-SO06_RS16010;Name=SO06_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16010 NZ_MYDG01000012.1 Protein Homology CDS 66374 67279 . + 0 ID=cds-WP_023231805.1;Parent=gene-SO06_RS16010;Dbxref=GenBank:WP_023231805.1;Name=WP_023231805.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462433.1;locus_tag=SO06_RS16010;product=dihydrodipicolinate synthase family protein;protein_id=WP_023231805.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 67323 68078 . - . ID=gene-SO06_RS16015;Name=SO06_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16015 NZ_MYDG01000012.1 Protein Homology CDS 67323 68078 . - 0 ID=cds-WP_000724553.1;Parent=gene-SO06_RS16015;Dbxref=GenBank:WP_000724553.1;Name=WP_000724553.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462434.1;locus_tag=SO06_RS16015;product=IclR family transcriptional regulator;protein_id=WP_000724553.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 68256 70703 . - . ID=gene-SO06_RS16020;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=SO06_RS16020 NZ_MYDG01000012.1 Protein Homology CDS 68256 70703 . - 0 ID=cds-WP_020899335.1;Parent=gene-SO06_RS16020;Dbxref=GenBank:WP_020899335.1;Name=WP_020899335.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=SO06_RS16020;product=glycogen phosphorylase;protein_id=WP_020899335.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 70723 72156 . - . ID=gene-SO06_RS16025;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=SO06_RS16025 NZ_MYDG01000012.1 Protein Homology CDS 70723 72156 . - 0 ID=cds-WP_001197669.1;Parent=gene-SO06_RS16025;Dbxref=GenBank:WP_001197669.1;Name=WP_001197669.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=SO06_RS16025;product=glycogen synthase GlgA;protein_id=WP_001197669.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 72156 73451 . - . ID=gene-SO06_RS16030;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=SO06_RS16030 NZ_MYDG01000012.1 Protein Homology CDS 72156 73451 . - 0 ID=cds-WP_000253994.1;Parent=gene-SO06_RS16030;Dbxref=GenBank:WP_000253994.1;Name=WP_000253994.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=SO06_RS16030;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253994.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 73466 75442 . - . ID=gene-SO06_RS16035;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=SO06_RS16035 NZ_MYDG01000012.1 Protein Homology CDS 73466 75442 . - 0 ID=cds-WP_080204269.1;Parent=gene-SO06_RS16035;Dbxref=GenBank:WP_080204269.1;Name=WP_080204269.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=SO06_RS16035;product=glycogen debranching protein GlgX;protein_id=WP_080204269.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 75439 77625 . - . ID=gene-SO06_RS16040;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=SO06_RS16040 NZ_MYDG01000012.1 Protein Homology CDS 75439 77625 . - 0 ID=cds-WP_000098552.1;Parent=gene-SO06_RS16040;Dbxref=GenBank:WP_000098552.1;Name=WP_000098552.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=SO06_RS16040;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_000098552.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 77972 79078 . - . ID=gene-SO06_RS16045;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=SO06_RS16045 NZ_MYDG01000012.1 Protein Homology CDS 77972 79078 . - 0 ID=cds-WP_000799940.1;Parent=gene-SO06_RS16045;Dbxref=GenBank:WP_000799940.1;Name=WP_000799940.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=SO06_RS16045;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799940.1;transl_table=11 NZ_MYDG01000012.1 RefSeq pseudogene 79313 79387 . + . ID=gene-SO06_RS25810;Name=SO06_RS25810;end_range=79387,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25810;partial=true;pseudo=true NZ_MYDG01000012.1 Protein Homology CDS 79313 79387 . + 0 ID=cds-SO06_RS25810;Parent=gene-SO06_RS25810;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=79387,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=SO06_RS25810;partial=true;product=MarC family protein;pseudo=true;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 79502 80842 . - . ID=gene-SO06_RS16055;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=SO06_RS16055 NZ_MYDG01000012.1 Protein Homology CDS 79502 80842 . - 0 ID=cds-WP_000105950.1;Parent=gene-SO06_RS16055;Dbxref=GenBank:WP_000105950.1;Name=WP_000105950.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=SO06_RS16055;product=gluconate transporter;protein_id=WP_000105950.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 80839 81372 . - . ID=gene-SO06_RS16060;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=SO06_RS16060 NZ_MYDG01000012.1 Protein Homology CDS 80839 81372 . - 0 ID=cds-WP_000108340.1;Parent=gene-SO06_RS16060;Dbxref=GenBank:WP_000108340.1;Name=WP_000108340.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=SO06_RS16060;product=gluconokinase;protein_id=WP_000108340.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 81511 82506 . - . ID=gene-SO06_RS16065;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=SO06_RS16065 NZ_MYDG01000012.1 Protein Homology CDS 81511 82506 . - 0 ID=cds-WP_000730239.1;Parent=gene-SO06_RS16065;Dbxref=GenBank:WP_000730239.1;Name=WP_000730239.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=SO06_RS16065;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730239.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 82636 83331 . - . ID=gene-SO06_RS16070;Name=SO06_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16070 NZ_MYDG01000012.1 Protein Homology CDS 82636 83331 . - 0 ID=cds-WP_000639789.1;Parent=gene-SO06_RS16070;Dbxref=GenBank:WP_000639789.1;Name=WP_000639789.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=SO06_RS16070;product=pirin family protein;protein_id=WP_000639789.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 83455 84492 . - . ID=gene-SO06_RS16075;Name=SO06_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16075 NZ_MYDG01000012.1 Protein Homology CDS 83455 84492 . - 0 ID=cds-WP_080204270.1;Parent=gene-SO06_RS16075;Dbxref=GenBank:WP_080204270.1;Name=WP_080204270.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=SO06_RS16075;product=oxidoreductase;protein_id=WP_080204270.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 84958 85446 . + . ID=gene-SO06_RS16080;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=SO06_RS16080 NZ_MYDG01000012.1 Protein Homology CDS 84958 85446 . + 0 ID=cds-WP_023231809.1;Parent=gene-SO06_RS16080;Dbxref=GenBank:WP_023231809.1;Name=WP_023231809.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=SO06_RS16080;product=N-acetyltransferase;protein_id=WP_023231809.1;transl_table=11 NZ_MYDG01000012.1 RefSeq pseudogene 85711 86925 . + . ID=gene-SO06_RS16085;Name=SO06_RS16085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS16085;pseudo=true NZ_MYDG01000012.1 Protein Homology CDS 85711 86925 . + 0 ID=cds-SO06_RS16085;Parent=gene-SO06_RS16085;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=SO06_RS16085;product=PfkB family carbohydrate kinase;pseudo=true;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 86941 87702 . + . ID=gene-SO06_RS16090;Name=SO06_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16090 NZ_MYDG01000012.1 Protein Homology CDS 86941 87702 . + 0 ID=cds-WP_001066509.1;Parent=gene-SO06_RS16090;Dbxref=GenBank:WP_001066509.1;Name=WP_001066509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=SO06_RS16090;product=glutamine amidotransferase;protein_id=WP_001066509.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 87756 88727 . + . ID=gene-SO06_RS16095;Name=SO06_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16095 NZ_MYDG01000012.1 Protein Homology CDS 87756 88727 . + 0 ID=cds-WP_001038949.1;Parent=gene-SO06_RS16095;Dbxref=GenBank:WP_001038949.1;Name=WP_001038949.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=SO06_RS16095;product=DMT family transporter;protein_id=WP_001038949.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 88724 89758 . + . ID=gene-SO06_RS16100;Name=SO06_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16100 NZ_MYDG01000012.1 Protein Homology CDS 88724 89758 . + 0 ID=cds-WP_000675710.1;Parent=gene-SO06_RS16100;Dbxref=GenBank:WP_000675710.1;Name=WP_000675710.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=SO06_RS16100;product=phosphotriesterase family protein;protein_id=WP_000675710.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 89803 91545 . - . ID=gene-SO06_RS16105;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=SO06_RS16105 NZ_MYDG01000012.1 Protein Homology CDS 89803 91545 . - 0 ID=cds-WP_023231462.1;Parent=gene-SO06_RS16105;Dbxref=GenBank:WP_023231462.1;Name=WP_023231462.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=SO06_RS16105;product=gamma-glutamyltransferase;protein_id=WP_023231462.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 91671 92087 . + . ID=gene-SO06_RS16110;Name=SO06_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16110 NZ_MYDG01000012.1 Protein Homology CDS 91671 92087 . + 0 ID=cds-WP_000826041.1;Parent=gene-SO06_RS16110;Dbxref=GenBank:WP_000826041.1;Name=WP_000826041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=SO06_RS16110;product=DUF2756 family protein;protein_id=WP_000826041.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 92100 92840 . - . ID=gene-SO06_RS16115;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=SO06_RS16115 NZ_MYDG01000012.1 Protein Homology CDS 92100 92840 . - 0 ID=cds-WP_023231463.1;Parent=gene-SO06_RS16115;Dbxref=GenBank:WP_023231463.1;Name=WP_023231463.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=SO06_RS16115;product=glycerophosphodiester phosphodiesterase;protein_id=WP_023231463.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 92837 93907 . - . ID=gene-SO06_RS16120;Name=SO06_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16120 NZ_MYDG01000012.1 Protein Homology CDS 92837 93907 . - 0 ID=cds-WP_000907838.1;Parent=gene-SO06_RS16120;Dbxref=GenBank:WP_000907838.1;Name=WP_000907838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=SO06_RS16120;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_000907838.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 93909 94754 . - . ID=gene-SO06_RS16125;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=SO06_RS16125 NZ_MYDG01000012.1 Protein Homology CDS 93909 94754 . - 0 ID=cds-WP_000572196.1;Parent=gene-SO06_RS16125;Dbxref=GenBank:WP_000572196.1;Name=WP_000572196.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=SO06_RS16125;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572196.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 94751 95638 . - . ID=gene-SO06_RS16130;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=SO06_RS16130 NZ_MYDG01000012.1 Protein Homology CDS 94751 95638 . - 0 ID=cds-WP_000094074.1;Parent=gene-SO06_RS16130;Dbxref=GenBank:WP_000094074.1;Name=WP_000094074.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=SO06_RS16130;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000094074.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 95743 97059 . - . ID=gene-SO06_RS16135;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=SO06_RS16135 NZ_MYDG01000012.1 Protein Homology CDS 95743 97059 . - 0 ID=cds-WP_000624749.1;Parent=gene-SO06_RS16135;Dbxref=GenBank:WP_000624749.1;Name=WP_000624749.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=SO06_RS16135;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000624749.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 97292 97570 . - . ID=gene-SO06_RS16140;Name=SO06_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16140 NZ_MYDG01000012.1 Protein Homology CDS 97292 97570 . - 0 ID=cds-WP_000621260.1;Parent=gene-SO06_RS16140;Dbxref=GenBank:WP_000621260.1;Name=WP_000621260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621258.1;locus_tag=SO06_RS16140;product=hypothetical protein;protein_id=WP_000621260.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 97734 98447 . - . ID=gene-SO06_RS16145;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=SO06_RS16145 NZ_MYDG01000012.1 Protein Homology CDS 97734 98447 . - 0 ID=cds-WP_000416114.1;Parent=gene-SO06_RS16145;Dbxref=GenBank:WP_000416114.1;Name=WP_000416114.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=SO06_RS16145;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416114.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 98449 99216 . - . ID=gene-SO06_RS16150;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=SO06_RS16150 NZ_MYDG01000012.1 Protein Homology CDS 98449 99216 . - 0 ID=cds-WP_000082080.1;Parent=gene-SO06_RS16150;Dbxref=GenBank:WP_000082080.1;Name=WP_000082080.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=SO06_RS16150;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082080.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 99213 100490 . - . ID=gene-SO06_RS16155;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=SO06_RS16155 NZ_MYDG01000012.1 Protein Homology CDS 99213 100490 . - 0 ID=cds-WP_000803764.1;Parent=gene-SO06_RS16155;Dbxref=GenBank:WP_000803764.1;Name=WP_000803764.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=SO06_RS16155;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803764.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 100487 101413 . - . ID=gene-SO06_RS16160;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=SO06_RS16160 NZ_MYDG01000012.1 Protein Homology CDS 100487 101413 . - 0 ID=cds-WP_000003005.1;Parent=gene-SO06_RS16160;Dbxref=GenBank:WP_000003005.1;Name=WP_000003005.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=SO06_RS16160;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003005.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 101473 102582 . - . ID=gene-SO06_RS16165;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=SO06_RS16165 NZ_MYDG01000012.1 Protein Homology CDS 101473 102582 . - 0 ID=cds-WP_000822976.1;Parent=gene-SO06_RS16165;Dbxref=GenBank:WP_000822976.1;Name=WP_000822976.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=SO06_RS16165;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000822976.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 103004 103387 . + . ID=gene-SO06_RS16170;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=SO06_RS16170 NZ_MYDG01000012.1 Protein Homology CDS 103004 103387 . + 0 ID=cds-WP_000778873.1;Parent=gene-SO06_RS16170;Dbxref=GenBank:WP_000778873.1;Name=WP_000778873.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=SO06_RS16170;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778873.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 103365 103499 . + . ID=gene-SO06_RS16175;Name=SO06_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16175 NZ_MYDG01000012.1 Protein Homology CDS 103365 103499 . + 0 ID=cds-WP_001517957.1;Parent=gene-SO06_RS16175;Dbxref=GenBank:WP_001517957.1;Name=WP_001517957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=SO06_RS16175;product=hypothetical protein;protein_id=WP_001517957.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 103583 104686 . - . ID=gene-SO06_RS16180;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=SO06_RS16180 NZ_MYDG01000012.1 Protein Homology CDS 103583 104686 . - 0 ID=cds-WP_023231465.1;Parent=gene-SO06_RS16180;Dbxref=GenBank:WP_023231465.1;Name=WP_023231465.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229277.1;locus_tag=SO06_RS16180;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_023231465.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 105008 105862 . - . ID=gene-SO06_RS16185;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=SO06_RS16185 NZ_MYDG01000012.1 Protein Homology CDS 105008 105862 . - 0 ID=cds-WP_000159621.1;Parent=gene-SO06_RS16185;Dbxref=GenBank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=SO06_RS16185;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 106108 107163 . - . ID=gene-SO06_RS16190;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=SO06_RS16190 NZ_MYDG01000012.1 Protein Homology CDS 106108 107163 . - 0 ID=cds-WP_023231466.1;Parent=gene-SO06_RS16190;Dbxref=GenBank:WP_023231466.1;Name=WP_023231466.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=SO06_RS16190;product=permease-like cell division protein FtsX;protein_id=WP_023231466.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 107156 107824 . - . ID=gene-SO06_RS16195;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=SO06_RS16195 NZ_MYDG01000012.1 Protein Homology CDS 107156 107824 . - 0 ID=cds-WP_000617729.1;Parent=gene-SO06_RS16195;Dbxref=GenBank:WP_000617729.1;Name=WP_000617729.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=SO06_RS16195;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 107827 109302 . - . ID=gene-SO06_RS16200;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=SO06_RS16200 NZ_MYDG01000012.1 Protein Homology CDS 107827 109302 . - 0 ID=cds-WP_001118694.1;Parent=gene-SO06_RS16200;Dbxref=GenBank:WP_001118694.1;Name=WP_001118694.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=SO06_RS16200;product=signal recognition particle-docking protein FtsY;protein_id=WP_001118694.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 109428 110024 . + . ID=gene-SO06_RS16205;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=SO06_RS16205 NZ_MYDG01000012.1 Protein Homology CDS 109428 110024 . + 0 ID=cds-WP_000743275.1;Parent=gene-SO06_RS16205;Dbxref=GenBank:WP_000743275.1;Name=WP_000743275.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=SO06_RS16205;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743275.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 110014 110283 . + . ID=gene-SO06_RS16210;Name=SO06_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16210 NZ_MYDG01000012.1 Protein Homology CDS 110014 110283 . + 0 ID=cds-WP_000906759.1;Parent=gene-SO06_RS16210;Dbxref=GenBank:WP_000906759.1;Name=WP_000906759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=SO06_RS16210;product=DUF1145 family protein;protein_id=WP_000906759.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 110305 110676 . - . ID=gene-SO06_RS16215;Name=SO06_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16215 NZ_MYDG01000012.1 Protein Homology CDS 110305 110676 . - 0 ID=cds-WP_000042860.1;Parent=gene-SO06_RS16215;Dbxref=GenBank:WP_000042860.1;Name=WP_000042860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=SO06_RS16215;product=DUF2500 domain-containing protein;protein_id=WP_000042860.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 110818 111444 . + . ID=gene-SO06_RS16220;Name=SO06_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16220 NZ_MYDG01000012.1 Protein Homology CDS 110818 111444 . + 0 ID=cds-WP_000964735.1;Parent=gene-SO06_RS16220;Dbxref=GenBank:WP_000964735.1;Name=WP_000964735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=SO06_RS16220;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 111525 113723 . + . ID=gene-SO06_RS16225;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=SO06_RS16225 NZ_MYDG01000012.1 Protein Homology CDS 111525 113723 . + 0 ID=cds-WP_023231467.1;Parent=gene-SO06_RS16225;Dbxref=GenBank:WP_023231467.1;Name=WP_023231467.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=SO06_RS16225;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_023231467.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 113920 115563 . + . ID=gene-SO06_RS16230;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=SO06_RS16230 NZ_MYDG01000012.1 Protein Homology CDS 113920 115563 . + 0 ID=cds-WP_000789682.1;Parent=gene-SO06_RS16230;Dbxref=GenBank:WP_000789682.1;Name=WP_000789682.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=SO06_RS16230;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789682.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 115587 115832 . - . ID=gene-SO06_RS16235;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=SO06_RS16235 NZ_MYDG01000012.1 Protein Homology CDS 115587 115832 . - 0 ID=cds-WP_001541054.1;Parent=gene-SO06_RS16235;Dbxref=GenBank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=SO06_RS16235;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 116002 116667 . + . ID=gene-SO06_RS16240;Name=SO06_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16240 NZ_MYDG01000012.1 Protein Homology CDS 116002 116667 . + 0 ID=cds-WP_001518097.1;Parent=gene-SO06_RS16240;Dbxref=GenBank:WP_001518097.1;Name=WP_001518097.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=SO06_RS16240;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001518097.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 116740 117297 . + . ID=gene-SO06_RS16245;Name=SO06_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16245 NZ_MYDG01000012.1 Protein Homology CDS 116740 117297 . + 0 ID=cds-WP_001245277.1;Parent=gene-SO06_RS16245;Dbxref=GenBank:WP_001245277.1;Name=WP_001245277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=SO06_RS16245;product=DcrB family lipoprotein;protein_id=WP_001245277.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 117301 118560 . - . ID=gene-SO06_RS16250;Name=SO06_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16250 NZ_MYDG01000012.1 Protein Homology CDS 117301 118560 . - 0 ID=cds-WP_077248389.1;Parent=gene-SO06_RS16250;Dbxref=GenBank:WP_077248389.1;Name=WP_077248389.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=SO06_RS16250;product=MFS transporter;protein_id=WP_077248389.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 118650 119699 . + . ID=gene-SO06_RS16255;Name=SO06_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16255 NZ_MYDG01000012.1 Protein Homology CDS 118650 119699 . + 0 ID=cds-WP_000179588.1;Parent=gene-SO06_RS16255;Dbxref=GenBank:WP_000179588.1;Name=WP_000179588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=SO06_RS16255;product=AI-2E family transporter;protein_id=WP_000179588.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 119751 120329 . + . ID=gene-SO06_RS16260;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=SO06_RS16260 NZ_MYDG01000012.1 Protein Homology CDS 119751 120329 . + 0 ID=cds-WP_020899344.1;Parent=gene-SO06_RS16260;Dbxref=GenBank:WP_020899344.1;Name=WP_020899344.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=SO06_RS16260;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_020899344.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 120421 120822 . + . ID=gene-SO06_RS16265;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=SO06_RS16265 NZ_MYDG01000012.1 Protein Homology CDS 120421 120822 . + 0 ID=cds-WP_001190057.1;Parent=gene-SO06_RS16265;Dbxref=GenBank:WP_001190057.1;Name=WP_001190057.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=SO06_RS16265;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190057.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 120912 122036 . - . ID=gene-SO06_RS16270;Name=SO06_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16270 NZ_MYDG01000012.1 Protein Homology CDS 120912 122036 . - 0 ID=cds-WP_001214750.1;Parent=gene-SO06_RS16270;Dbxref=GenBank:WP_001214750.1;Name=WP_001214750.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=SO06_RS16270;product=ABC transporter permease;protein_id=WP_001214750.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 122036 124777 . - . ID=gene-SO06_RS16275;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=SO06_RS16275 NZ_MYDG01000012.1 Protein Homology CDS 122036 124777 . - 0 ID=cds-WP_000202924.1;Parent=gene-SO06_RS16275;Dbxref=GenBank:WP_000202924.1;Name=WP_000202924.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=SO06_RS16275;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_000202924.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 124774 125841 . - . ID=gene-SO06_RS16280;Name=SO06_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16280 NZ_MYDG01000012.1 Protein Homology CDS 124774 125841 . - 0 ID=cds-WP_000359836.1;Parent=gene-SO06_RS16280;Dbxref=GenBank:WP_000359836.1;Name=WP_000359836.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=SO06_RS16280;product=HlyD family secretion protein;protein_id=WP_000359836.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 126147 127343 . - . ID=gene-SO06_RS16285;Name=SO06_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16285 NZ_MYDG01000012.1 Protein Homology CDS 126147 127343 . - 0 ID=cds-WP_023232286.1;Parent=gene-SO06_RS16285;Dbxref=GenBank:WP_023232286.1;Name=WP_023232286.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=SO06_RS16285;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_023232286.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 127574 129070 . + . ID=gene-SO06_RS16290;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=SO06_RS16290 NZ_MYDG01000012.1 Protein Homology CDS 127574 129070 . + 0 ID=cds-WP_000902764.1;Parent=gene-SO06_RS16290;Dbxref=GenBank:WP_000902764.1;Name=WP_000902764.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=SO06_RS16290;product=inorganic phosphate transporter PitA;protein_id=WP_000902764.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 129211 129546 . - . ID=gene-SO06_RS16295;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=SO06_RS16295 NZ_MYDG01000012.1 Protein Homology CDS 129211 129546 . - 0 ID=cds-WP_000626193.1;Parent=gene-SO06_RS16295;Dbxref=GenBank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=SO06_RS16295;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 129934 130368 . + . ID=gene-SO06_RS16300;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=SO06_RS16300 NZ_MYDG01000012.1 Protein Homology CDS 129934 130368 . + 0 ID=cds-WP_000323565.1;Parent=gene-SO06_RS16300;Dbxref=GenBank:WP_000323565.1;Name=WP_000323565.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=SO06_RS16300;product=universal stress protein UspA;protein_id=WP_000323565.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 130693 132165 . + . ID=gene-SO06_RS16305;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=SO06_RS16305 NZ_MYDG01000012.1 Protein Homology CDS 130693 132165 . + 0 ID=cds-WP_001098270.1;Parent=gene-SO06_RS16305;Dbxref=GenBank:WP_001098270.1;Name=WP_001098270.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=SO06_RS16305;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098270.1;transl_table=11 NZ_MYDG01000012.1 RefSeq gene 132257 132666 . - . ID=gene-SO06_RS16310;Name=SO06_RS16310;end_range=132666,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16310;partial=true NZ_MYDG01000012.1 Protein Homology CDS 132257 132666 . - 2 ID=cds-WP_176210689.1;Parent=gene-SO06_RS16310;Dbxref=GenBank:WP_176210689.1;Name=WP_176210689.1;Ontology_term=GO:0031167,GO:0008990;end_range=132666,.;gbkey=CDS;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=SO06_RS16310;partial=true;product=class I SAM-dependent methyltransferase;protein_id=WP_176210689.1;transl_table=11 ##sequence-region NZ_MYDG01000013.1 1 115075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000013.1 RefSeq region 1 115075 . + . ID=NZ_MYDG01000013.1:1..115075;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000013.1 RefSeq gene 1 196 . + . ID=gene-SO06_RS16315;Name=SO06_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16315;partial=true;start_range=.,1 NZ_MYDG01000013.1 Protein Homology CDS 1 196 . + 1 ID=cds-WP_139762065.1;Parent=gene-SO06_RS16315;Dbxref=GenBank:WP_139762065.1;Name=WP_139762065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=SO06_RS16315;partial=true;product=hypothetical protein;protein_id=WP_139762065.1;start_range=.,1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 393 1010 . - . ID=gene-SO06_RS16320;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=SO06_RS16320 NZ_MYDG01000013.1 Protein Homology CDS 393 1010 . - 0 ID=cds-WP_000068097.1;Parent=gene-SO06_RS16320;Dbxref=GenBank:WP_000068097.1;Name=WP_000068097.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=SO06_RS16320;product=thymidine kinase;protein_id=WP_000068097.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 1673 2086 . + . ID=gene-SO06_RS16325;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=SO06_RS16325 NZ_MYDG01000013.1 Protein Homology CDS 1673 2086 . + 0 ID=cds-WP_001287383.1;Parent=gene-SO06_RS16325;Dbxref=GenBank:WP_001287383.1;Name=WP_001287383.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=SO06_RS16325;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287383.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 2218 3126 . - . ID=gene-SO06_RS16330;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=SO06_RS16330 NZ_MYDG01000013.1 Protein Homology CDS 2218 3126 . - 0 ID=cds-WP_000729450.1;Parent=gene-SO06_RS16330;Dbxref=GenBank:WP_000729450.1;Name=WP_000729450.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=SO06_RS16330;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000729450.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 3329 4342 . - . ID=gene-SO06_RS16335;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=SO06_RS16335 NZ_MYDG01000013.1 Protein Homology CDS 3329 4342 . - 0 ID=cds-WP_000193432.1;Parent=gene-SO06_RS16335;Dbxref=GenBank:WP_000193432.1;Name=WP_000193432.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=SO06_RS16335;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 4433 5338 . - . ID=gene-SO06_RS16340;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=SO06_RS16340 NZ_MYDG01000013.1 Protein Homology CDS 4433 5338 . - 0 ID=cds-WP_001230572.1;Parent=gene-SO06_RS16340;Dbxref=GenBank:WP_001230572.1;Name=WP_001230572.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=phosphatidylcholine lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=SO06_RS16340;product=patatin-like phospholipase RssA;protein_id=WP_001230572.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 5449 5907 . + . ID=gene-SO06_RS16345;Name=SO06_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16345 NZ_MYDG01000013.1 Protein Homology CDS 5449 5907 . + 0 ID=cds-WP_001540172.1;Parent=gene-SO06_RS16345;Dbxref=GenBank:WP_001540172.1;Name=WP_001540172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=SO06_RS16345;product=YchJ family protein;protein_id=WP_001540172.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 5958 6800 . + . ID=gene-SO06_RS16350;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=SO06_RS16350 NZ_MYDG01000013.1 Protein Homology CDS 5958 6800 . + 0 ID=cds-WP_001191156.1;Parent=gene-SO06_RS16350;Dbxref=GenBank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=SO06_RS16350;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 6971 7112 . + . ID=gene-SO06_RS16355;Name=SO06_RS16355;gbkey=Gene;gene_biotype=ncRNA;locus_tag=SO06_RS16355 NZ_MYDG01000013.1 cmsearch ncRNA 6971 7112 . + . ID=rna-SO06_RS16355;Parent=gene-SO06_RS16355;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS16355;product=RtT sRNA NZ_MYDG01000013.1 cmsearch exon 6971 7112 . + . ID=exon-SO06_RS16355-1;Parent=rna-SO06_RS16355;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS16355;product=RtT sRNA NZ_MYDG01000013.1 RefSeq gene 7141 7225 . + . ID=gene-SO06_RS16360;Name=SO06_RS16360;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS16360 NZ_MYDG01000013.1 tRNAscan-SE tRNA 7141 7225 . + . ID=rna-SO06_RS16360;Parent=gene-SO06_RS16360;anticodon=(pos:7175..7177);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS16360;product=tRNA-Tyr NZ_MYDG01000013.1 tRNAscan-SE exon 7141 7225 . + . ID=exon-SO06_RS16360-1;Parent=rna-SO06_RS16360;anticodon=(pos:7175..7177);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS16360;product=tRNA-Tyr NZ_MYDG01000013.1 RefSeq gene 7270 7401 . + . ID=gene-SO06_RS16365;Name=SO06_RS16365;gbkey=Gene;gene_biotype=ncRNA;locus_tag=SO06_RS16365 NZ_MYDG01000013.1 cmsearch ncRNA 7270 7401 . + . ID=rna-SO06_RS16365;Parent=gene-SO06_RS16365;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS16365;product=RtT sRNA NZ_MYDG01000013.1 cmsearch exon 7270 7401 . + . ID=exon-SO06_RS16365-1;Parent=rna-SO06_RS16365;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS16365;product=RtT sRNA NZ_MYDG01000013.1 RefSeq gene 7436 7520 . + . ID=gene-SO06_RS16370;Name=SO06_RS16370;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS16370 NZ_MYDG01000013.1 tRNAscan-SE tRNA 7436 7520 . + . ID=rna-SO06_RS16370;Parent=gene-SO06_RS16370;anticodon=(pos:7470..7472);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS16370;product=tRNA-Tyr NZ_MYDG01000013.1 tRNAscan-SE exon 7436 7520 . + . ID=exon-SO06_RS16370-1;Parent=rna-SO06_RS16370;anticodon=(pos:7470..7472);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS16370;product=tRNA-Tyr NZ_MYDG01000013.1 RefSeq gene 7564 7695 . + . ID=gene-SO06_RS16375;Name=SO06_RS16375;gbkey=Gene;gene_biotype=ncRNA;locus_tag=SO06_RS16375 NZ_MYDG01000013.1 cmsearch ncRNA 7564 7695 . + . ID=rna-SO06_RS16375;Parent=gene-SO06_RS16375;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS16375;product=RtT sRNA NZ_MYDG01000013.1 cmsearch exon 7564 7695 . + . ID=exon-SO06_RS16375-1;Parent=rna-SO06_RS16375;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS16375;product=RtT sRNA NZ_MYDG01000013.1 RefSeq gene 7739 7869 . + . ID=gene-SO06_RS16380;Name=SO06_RS16380;gbkey=Gene;gene_biotype=ncRNA;locus_tag=SO06_RS16380 NZ_MYDG01000013.1 cmsearch ncRNA 7739 7869 . + . ID=rna-SO06_RS16380;Parent=gene-SO06_RS16380;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS16380;product=RtT sRNA NZ_MYDG01000013.1 cmsearch exon 7739 7869 . + . ID=exon-SO06_RS16380-1;Parent=rna-SO06_RS16380;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS16380;product=RtT sRNA NZ_MYDG01000013.1 RefSeq gene 7964 9493 . - . ID=gene-SO06_RS16385;Name=SO06_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16385 NZ_MYDG01000013.1 Protein Homology CDS 7964 9493 . - 0 ID=cds-WP_023231396.1;Parent=gene-SO06_RS16385;Dbxref=GenBank:WP_023231396.1;Name=WP_023231396.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=SO06_RS16385;product=tetratricopeptide repeat protein;protein_id=WP_023231396.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 9735 10412 . - . ID=gene-SO06_RS16395;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=SO06_RS16395 NZ_MYDG01000013.1 Protein Homology CDS 9735 10412 . - 0 ID=cds-WP_000545594.1;Parent=gene-SO06_RS16395;Dbxref=GenBank:WP_000545594.1;Name=WP_000545594.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=SO06_RS16395;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545594.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 10412 11122 . - . ID=gene-SO06_RS16400;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=SO06_RS16400 NZ_MYDG01000013.1 Protein Homology CDS 10412 11122 . - 0 ID=cds-WP_000571668.1;Parent=gene-SO06_RS16400;Dbxref=GenBank:WP_000571668.1;Name=WP_000571668.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=SO06_RS16400;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571668.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 11119 12654 . - . ID=gene-SO06_RS16405;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=SO06_RS16405 NZ_MYDG01000013.1 Protein Homology CDS 11119 12654 . - 0 ID=cds-WP_048348797.1;Parent=gene-SO06_RS16405;Dbxref=GenBank:WP_048348797.1;Name=WP_048348797.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=SO06_RS16405;product=nitrate reductase subunit beta;protein_id=WP_048348797.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 12651 16394 . - . ID=gene-SO06_RS16410;Name=SO06_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16410 NZ_MYDG01000013.1 Protein Homology CDS 12651 16394 . - 0 ID=cds-WP_048348798.1;Parent=gene-SO06_RS16410;Dbxref=GenBank:WP_048348798.1;Name=WP_048348798.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=SO06_RS16410;product=nitrate reductase subunit alpha;protein_id=WP_048348798.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 16782 18179 . - . ID=gene-SO06_RS16415;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=SO06_RS16415 NZ_MYDG01000013.1 Protein Homology CDS 16782 18179 . - 0 ID=cds-WP_023231540.1;Parent=gene-SO06_RS16415;Dbxref=GenBank:WP_023231540.1;Name=WP_023231540.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=SO06_RS16415;product=nitrate transporter NarK;protein_id=WP_023231540.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 18520 20316 . + . ID=gene-SO06_RS16425;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=SO06_RS16425 NZ_MYDG01000013.1 Protein Homology CDS 18520 20316 . + 0 ID=cds-WP_000476244.1;Parent=gene-SO06_RS16425;Dbxref=GenBank:WP_000476244.1;Name=WP_000476244.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=SO06_RS16425;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000476244.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 20309 20959 . + . ID=gene-SO06_RS16430;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=SO06_RS16430 NZ_MYDG01000013.1 Protein Homology CDS 20309 20959 . + 0 ID=cds-WP_001064598.1;Parent=gene-SO06_RS16430;Dbxref=GenBank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=SO06_RS16430;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 20960 22384 . - . ID=gene-SO06_RS16435;Name=SO06_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16435 NZ_MYDG01000013.1 Protein Homology CDS 20960 22384 . - 0 ID=cds-WP_001116347.1;Parent=gene-SO06_RS16435;Dbxref=GenBank:WP_001116347.1;Name=WP_001116347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=SO06_RS16435;product=YchO/YchP family invasin;protein_id=WP_001116347.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 22561 22914 . + . ID=gene-SO06_RS16440;Name=SO06_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16440 NZ_MYDG01000013.1 Protein Homology CDS 22561 22914 . + 0 ID=cds-WP_001179794.1;Parent=gene-SO06_RS16440;Dbxref=GenBank:WP_001179794.1;Name=WP_001179794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=SO06_RS16440;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_001179794.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 22994 23224 . - . ID=gene-SO06_RS16445;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=SO06_RS16445 NZ_MYDG01000013.1 Protein Homology CDS 22994 23224 . - 0 ID=cds-WP_001146392.1;Parent=gene-SO06_RS16445;Dbxref=GenBank:WP_001146392.1;Name=WP_001146392.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=SO06_RS16445;product=putative cation transport regulator ChaB;protein_id=WP_001146392.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 23491 24591 . + . ID=gene-SO06_RS16450;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=SO06_RS16450 NZ_MYDG01000013.1 Protein Homology CDS 23491 24591 . + 0 ID=cds-WP_000148418.1;Parent=gene-SO06_RS16450;Dbxref=GenBank:WP_000148418.1;Name=WP_000148418.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=SO06_RS16450;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148418.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 24645 25499 . - . ID=gene-SO06_RS16455;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=SO06_RS16455 NZ_MYDG01000013.1 Protein Homology CDS 24645 25499 . - 0 ID=cds-WP_000811046.1;Parent=gene-SO06_RS16455;Dbxref=GenBank:WP_000811046.1;Name=WP_000811046.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=SO06_RS16455;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 25537 26346 . - . ID=gene-SO06_RS16460;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=SO06_RS16460 NZ_MYDG01000013.1 Protein Homology CDS 25537 26346 . - 0 ID=cds-WP_001257065.1;Parent=gene-SO06_RS16460;Dbxref=GenBank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=SO06_RS16460;product=invasion regulator SirB1;protein_id=WP_001257065.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 26350 26739 . - . ID=gene-SO06_RS16465;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=SO06_RS16465 NZ_MYDG01000013.1 Protein Homology CDS 26350 26739 . - 0 ID=cds-WP_000150667.1;Parent=gene-SO06_RS16465;Dbxref=GenBank:WP_000150667.1;Name=WP_000150667.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=SO06_RS16465;product=invasion regulator SirB2;protein_id=WP_000150667.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 26736 27569 . - . ID=gene-SO06_RS16470;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=SO06_RS16470 NZ_MYDG01000013.1 Protein Homology CDS 26736 27569 . - 0 ID=cds-WP_023231543.1;Parent=gene-SO06_RS16470;Dbxref=GenBank:WP_023231543.1;Name=WP_023231543.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=SO06_RS16470;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_023231543.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 27569 28651 . - . ID=gene-SO06_RS16475;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=SO06_RS16475 NZ_MYDG01000013.1 Protein Homology CDS 27569 28651 . - 0 ID=cds-WP_023231544.1;Parent=gene-SO06_RS16475;Dbxref=GenBank:WP_023231544.1;Name=WP_023231544.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=SO06_RS16475;product=peptide chain release factor 1;protein_id=WP_023231544.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 28692 29948 . - . ID=gene-SO06_RS16480;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=SO06_RS16480 NZ_MYDG01000013.1 Protein Homology CDS 28692 29948 . - 0 ID=cds-WP_000173208.1;Parent=gene-SO06_RS16480;Dbxref=GenBank:WP_000173208.1;Name=WP_000173208.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=SO06_RS16480;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 30262 30885 . + . ID=gene-SO06_RS16485;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=SO06_RS16485 NZ_MYDG01000013.1 Protein Homology CDS 30262 30885 . + 0 ID=cds-WP_000174484.1;Parent=gene-SO06_RS16485;Dbxref=GenBank:WP_000174484.1;Name=WP_000174484.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=SO06_RS16485;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_000174484.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 30882 31733 . + . ID=gene-SO06_RS16490;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=SO06_RS16490 NZ_MYDG01000013.1 Protein Homology CDS 30882 31733 . + 0 ID=cds-WP_000988246.1;Parent=gene-SO06_RS16490;Dbxref=GenBank:WP_000988246.1;Name=WP_000988246.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=SO06_RS16490;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000988246.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 31999 32946 . + . ID=gene-SO06_RS16495;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=SO06_RS16495 NZ_MYDG01000013.1 Protein Homology CDS 31999 32946 . + 0 ID=cds-WP_001518537.1;Parent=gene-SO06_RS16495;Dbxref=GenBank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=SO06_RS16495;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 33071 34756 . + . ID=gene-SO06_RS16500;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=SO06_RS16500 NZ_MYDG01000013.1 Protein Homology CDS 33071 34756 . + 0 ID=cds-WP_001037181.1;Parent=gene-SO06_RS16500;Dbxref=GenBank:WP_001037181.1;Name=WP_001037181.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=SO06_RS16500;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001037181.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 34801 35079 . - . ID=gene-SO06_RS16505;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=SO06_RS16505 NZ_MYDG01000013.1 Protein Homology CDS 34801 35079 . - 0 ID=cds-WP_000823878.1;Parent=gene-SO06_RS16505;Dbxref=GenBank:WP_000823878.1;Name=WP_000823878.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=SO06_RS16505;product=stress-induced protein YchH;protein_id=WP_000823878.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 35355 35939 . + . ID=gene-SO06_RS16510;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=SO06_RS16510 NZ_MYDG01000013.1 Protein Homology CDS 35355 35939 . + 0 ID=cds-WP_023231337.1;Parent=gene-SO06_RS16510;Dbxref=GenBank:WP_023231337.1;Name=WP_023231337.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=SO06_RS16510;product=aminoacyl-tRNA hydrolase;protein_id=WP_023231337.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 36056 37147 . + . ID=gene-SO06_RS16515;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=SO06_RS16515 NZ_MYDG01000013.1 Protein Homology CDS 36056 37147 . + 0 ID=cds-WP_000505850.1;Parent=gene-SO06_RS16515;Dbxref=GenBank:WP_000505850.1;Name=WP_000505850.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=SO06_RS16515;product=redox-regulated ATPase YchF;protein_id=WP_000505850.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 37906 38526 . + . ID=gene-SO06_RS16520;Name=SO06_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16520 NZ_MYDG01000013.1 Protein Homology CDS 37906 38526 . + 0 ID=cds-WP_170873655.1;Parent=gene-SO06_RS16520;Dbxref=GenBank:WP_170873655.1;Name=WP_170873655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=SO06_RS16520;product=hypothetical protein;protein_id=WP_170873655.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 38565 39020 . + . ID=gene-SO06_RS16525;Name=SO06_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16525 NZ_MYDG01000013.1 Protein Homology CDS 38565 39020 . + 0 ID=cds-WP_023231892.1;Parent=gene-SO06_RS16525;Dbxref=GenBank:WP_023231892.1;Name=WP_023231892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=SO06_RS16525;product=hypothetical protein;protein_id=WP_023231892.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 39496 40761 . - . ID=gene-SO06_RS16530;Name=SO06_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16530 NZ_MYDG01000013.1 Protein Homology CDS 39496 40761 . - 0 ID=cds-WP_023231891.1;Parent=gene-SO06_RS16530;Dbxref=GenBank:WP_023231891.1;Name=WP_023231891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=SO06_RS16530;product=DUF4427 domain-containing protein;protein_id=WP_023231891.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 41256 42374 . + . ID=gene-SO06_RS16535;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=SO06_RS16535 NZ_MYDG01000013.1 Protein Homology CDS 41256 42374 . + 0 ID=cds-WP_001058312.1;Parent=gene-SO06_RS16535;Dbxref=GenBank:WP_001058312.1;Name=WP_001058312.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=SO06_RS16535;product=hydrogenase 1 small subunit;protein_id=WP_001058312.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 42371 44164 . + . ID=gene-SO06_RS16540;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=SO06_RS16540 NZ_MYDG01000013.1 Protein Homology CDS 42371 44164 . + 0 ID=cds-WP_000070982.1;Parent=gene-SO06_RS16540;Dbxref=GenBank:WP_000070982.1;Name=WP_000070982.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=SO06_RS16540;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000070982.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 44183 44914 . + . ID=gene-SO06_RS16545;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=SO06_RS16545 NZ_MYDG01000013.1 Protein Homology CDS 44183 44914 . + 0 ID=cds-WP_000147031.1;Parent=gene-SO06_RS16545;Dbxref=GenBank:WP_000147031.1;Name=WP_000147031.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=SO06_RS16545;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000147031.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 44911 45507 . + . ID=gene-SO06_RS16550;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=SO06_RS16550 NZ_MYDG01000013.1 Protein Homology CDS 44911 45507 . + 0 ID=cds-WP_023231889.1;Parent=gene-SO06_RS16550;Dbxref=GenBank:WP_023231889.1;Name=WP_023231889.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=SO06_RS16550;product=hydrogenase 1 maturation protease;protein_id=WP_023231889.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 45497 45901 . + . ID=gene-SO06_RS16555;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=SO06_RS16555 NZ_MYDG01000013.1 Protein Homology CDS 45497 45901 . + 0 ID=cds-WP_023231888.1;Parent=gene-SO06_RS16555;Dbxref=GenBank:WP_023231888.1;Name=WP_023231888.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=SO06_RS16555;product=hydrogenase-1 operon protein HyaE;protein_id=WP_023231888.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 45898 46746 . + . ID=gene-SO06_RS16560;Name=SO06_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16560 NZ_MYDG01000013.1 Protein Homology CDS 45898 46746 . + 0 ID=cds-WP_000063377.1;Parent=gene-SO06_RS16560;Dbxref=GenBank:WP_000063377.1;Name=WP_000063377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=SO06_RS16560;product=hydrogenase expression/formation protein;protein_id=WP_000063377.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 46821 48365 . + . ID=gene-SO06_RS16565;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=SO06_RS16565 NZ_MYDG01000013.1 Protein Homology CDS 46821 48365 . + 0 ID=cds-WP_023231887.1;Parent=gene-SO06_RS16565;Dbxref=GenBank:WP_023231887.1;Name=WP_023231887.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=SO06_RS16565;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_023231887.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 48377 49513 . + . ID=gene-SO06_RS16570;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=SO06_RS16570 NZ_MYDG01000013.1 Protein Homology CDS 48377 49513 . + 0 ID=cds-WP_000888110.1;Parent=gene-SO06_RS16570;Dbxref=GenBank:WP_000888110.1;Name=WP_000888110.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=SO06_RS16570;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000888110.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 49526 49615 . + . ID=gene-SO06_RS16575;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=SO06_RS16575 NZ_MYDG01000013.1 Protein Homology CDS 49526 49615 . + 0 ID=cds-WP_000270306.1;Parent=gene-SO06_RS16575;Dbxref=GenBank:WP_000270306.1;Name=WP_000270306.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=SO06_RS16575;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270306.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 50010 51284 . + . ID=gene-SO06_RS16580;Name=SO06_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16580 NZ_MYDG01000013.1 Protein Homology CDS 50010 51284 . + 0 ID=cds-WP_045343573.1;Parent=gene-SO06_RS16580;Dbxref=GenBank:WP_045343573.1;Name=WP_045343573.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=SO06_RS16580;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_045343573.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 51498 53210 . + . ID=gene-SO06_RS16585;Name=SO06_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16585 NZ_MYDG01000013.1 Protein Homology CDS 51498 53210 . + 0 ID=cds-WP_023232590.1;Parent=gene-SO06_RS16585;Dbxref=GenBank:WP_023232590.1;Name=WP_023232590.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=SO06_RS16585;product=alpha%2Calpha-trehalase;protein_id=WP_023232590.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 53273 53527 . - . ID=gene-SO06_RS16590;Name=SO06_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16590 NZ_MYDG01000013.1 Protein Homology CDS 53273 53527 . - 0 ID=cds-WP_000511320.1;Parent=gene-SO06_RS16590;Dbxref=GenBank:WP_000511320.1;Name=WP_000511320.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=SO06_RS16590;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511320.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 53696 54430 . + . ID=gene-SO06_RS16595;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=SO06_RS16595 NZ_MYDG01000013.1 Protein Homology CDS 53696 54430 . + 0 ID=cds-WP_020438150.1;Parent=gene-SO06_RS16595;Dbxref=GenBank:WP_020438150.1;Name=WP_020438150.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=SO06_RS16595;product=flagellar brake protein YcgR;protein_id=WP_020438150.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 54444 55055 . - . ID=gene-SO06_RS16600;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=SO06_RS16600 NZ_MYDG01000013.1 Protein Homology CDS 54444 55055 . - 0 ID=cds-WP_000776974.1;Parent=gene-SO06_RS16600;Dbxref=GenBank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=SO06_RS16600;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 55227 56141 . + . ID=gene-SO06_RS16605;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=SO06_RS16605 NZ_MYDG01000013.1 Protein Homology CDS 55227 56141 . + 0 ID=cds-WP_023232591.1;Parent=gene-SO06_RS16605;Dbxref=GenBank:WP_023232591.1;Name=WP_023232591.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=SO06_RS16605;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_023232591.1;transl_table=11 NZ_MYDG01000013.1 RefSeq pseudogene 56238 57953 . + . ID=gene-SO06_RS16610;Name=SO06_RS16610;end_range=57953,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS16610;partial=true;pseudo=true NZ_MYDG01000013.1 Protein Homology CDS 56238 57953 . + 0 ID=cds-SO06_RS16610;Parent=gene-SO06_RS16610;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;end_range=57953,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=SO06_RS16610;partial=true;product=potassium/proton antiporter;pseudo=true;transl_table=11 NZ_MYDG01000013.1 RefSeq pseudogene 57909 58028 . - . ID=gene-SO06_RS25815;Name=SO06_RS25815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25815;partial=true;pseudo=true;start_range=.,57909 NZ_MYDG01000013.1 Protein Homology CDS 57909 58028 . - 0 ID=cds-SO06_RS25815;Parent=gene-SO06_RS25815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=SO06_RS25815;partial=true;product=hypothetical protein;pseudo=true;start_range=.,57909;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 58033 59103 . - . ID=gene-SO06_RS16615;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=SO06_RS16615 NZ_MYDG01000013.1 Protein Homology CDS 58033 59103 . - 0 ID=cds-WP_023232592.1;Parent=gene-SO06_RS16615;Dbxref=GenBank:WP_023232592.1;Name=WP_023232592.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=SO06_RS16615;product=catabolic alanine racemase DadX;protein_id=WP_023232592.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 59117 60415 . - . ID=gene-SO06_RS16620;Name=SO06_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16620 NZ_MYDG01000013.1 Protein Homology CDS 59117 60415 . - 0 ID=cds-WP_001266935.1;Parent=gene-SO06_RS16620;Dbxref=GenBank:WP_001266935.1;Name=WP_001266935.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=SO06_RS16620;product=D-amino acid dehydrogenase;protein_id=WP_001266935.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 60738 62270 . + . ID=gene-SO06_RS16625;Name=SO06_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16625 NZ_MYDG01000013.1 Protein Homology CDS 60738 62270 . + 0 ID=cds-WP_000190831.1;Parent=gene-SO06_RS16625;Dbxref=GenBank:WP_000190831.1;Name=WP_000190831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=SO06_RS16625;product=SpoVR family protein;protein_id=WP_000190831.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 62317 63036 . - . ID=gene-SO06_RS16630;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=SO06_RS16630 NZ_MYDG01000013.1 Protein Homology CDS 62317 63036 . - 0 ID=cds-WP_000234826.1;Parent=gene-SO06_RS16630;Dbxref=GenBank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=SO06_RS16630;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 63256 64800 . + . ID=gene-SO06_RS16635;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=SO06_RS16635 NZ_MYDG01000013.1 Protein Homology CDS 63256 64800 . + 0 ID=cds-WP_000406444.1;Parent=gene-SO06_RS16635;Dbxref=GenBank:WP_000406444.1;Name=WP_000406444.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=SO06_RS16635;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406444.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 64942 65472 . + . ID=gene-SO06_RS16640;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=SO06_RS16640 NZ_MYDG01000013.1 Protein Homology CDS 64942 65472 . + 0 ID=cds-WP_000943475.1;Parent=gene-SO06_RS16640;Dbxref=GenBank:WP_000943475.1;Name=WP_000943475.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=SO06_RS16640;product=disulfide bond formation protein DsbB;protein_id=WP_000943475.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 65581 65922 . + . ID=gene-SO06_RS16645;Name=SO06_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16645 NZ_MYDG01000013.1 Protein Homology CDS 65581 65922 . + 0 ID=cds-WP_000018967.1;Parent=gene-SO06_RS16645;Dbxref=GenBank:WP_000018967.1;Name=WP_000018967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=SO06_RS16645;product=DUF1971 domain-containing protein;protein_id=WP_000018967.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 65994 66167 . - . ID=gene-SO06_RS16650;Name=SO06_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16650 NZ_MYDG01000013.1 Protein Homology CDS 65994 66167 . - 0 ID=cds-WP_001083582.1;Parent=gene-SO06_RS16650;Dbxref=GenBank:WP_001083582.1;Name=WP_001083582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=SO06_RS16650;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001083582.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 66359 66496 . - . ID=gene-SO06_RS16655;Name=SO06_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16655 NZ_MYDG01000013.1 Protein Homology CDS 66359 66496 . - 0 ID=cds-WP_001519337.1;Parent=gene-SO06_RS16655;Dbxref=GenBank:WP_001519337.1;Name=WP_001519337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=SO06_RS16655;product=hypothetical protein;protein_id=WP_001519337.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 66848 67294 . - . ID=gene-SO06_RS16660;Name=SO06_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16660 NZ_MYDG01000013.1 Protein Homology CDS 66848 67294 . - 0 ID=cds-WP_001285703.1;Parent=gene-SO06_RS16660;Dbxref=GenBank:WP_001285703.1;Name=WP_001285703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=SO06_RS16660;product=YcgN family cysteine cluster protein;protein_id=WP_001285703.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 67387 68046 . - . ID=gene-SO06_RS16665;Name=SO06_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16665 NZ_MYDG01000013.1 Protein Homology CDS 67387 68046 . - 0 ID=cds-WP_001537367.1;Parent=gene-SO06_RS16665;Dbxref=GenBank:WP_001537367.1;Name=WP_001537367.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=SO06_RS16665;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001537367.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 68096 68389 . - . ID=gene-SO06_RS16670;Name=SO06_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16670 NZ_MYDG01000013.1 Protein Homology CDS 68096 68389 . - 0 ID=cds-WP_001525604.1;Parent=gene-SO06_RS16670;Dbxref=GenBank:WP_001525604.1;Name=WP_001525604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=SO06_RS16670;product=YcgL domain-containing protein;protein_id=WP_001525604.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 68515 69222 . + . ID=gene-SO06_RS16675;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=SO06_RS16675 NZ_MYDG01000013.1 Protein Homology CDS 68515 69222 . + 0 ID=cds-WP_000072527.1;Parent=gene-SO06_RS16675;Dbxref=GenBank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=SO06_RS16675;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 69246 70058 . + . ID=gene-SO06_RS16680;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=SO06_RS16680 NZ_MYDG01000013.1 Protein Homology CDS 69246 70058 . + 0 ID=cds-WP_000101047.1;Parent=gene-SO06_RS16680;Dbxref=GenBank:WP_000101047.1;Name=WP_000101047.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=SO06_RS16680;product=septum site-determining protein MinD;protein_id=WP_000101047.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 70062 70328 . + . ID=gene-SO06_RS16685;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=SO06_RS16685 NZ_MYDG01000013.1 Protein Homology CDS 70062 70328 . + 0 ID=cds-WP_001185666.1;Parent=gene-SO06_RS16685;Dbxref=GenBank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=SO06_RS16685;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 70450 71577 . - . ID=gene-SO06_RS16690;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=SO06_RS16690 NZ_MYDG01000013.1 Protein Homology CDS 70450 71577 . - 0 ID=cds-WP_023232594.1;Parent=gene-SO06_RS16690;Dbxref=GenBank:WP_023232594.1;Name=WP_023232594.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=SO06_RS16690;product=ribonuclease D;protein_id=WP_023232594.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 71650 73335 . - . ID=gene-SO06_RS16695;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=SO06_RS16695 NZ_MYDG01000013.1 Protein Homology CDS 71650 73335 . - 0 ID=cds-WP_000758418.1;Parent=gene-SO06_RS16695;Dbxref=GenBank:WP_000758418.1;Name=WP_000758418.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=SO06_RS16695;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758418.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 73540 74121 . - . ID=gene-SO06_RS16705;Name=SO06_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16705 NZ_MYDG01000013.1 Protein Homology CDS 73540 74121 . - 0 ID=cds-WP_000290594.1;Parent=gene-SO06_RS16705;Dbxref=GenBank:WP_000290594.1;Name=WP_000290594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=SO06_RS16705;product=Slp family lipoprotein;protein_id=WP_000290594.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 74193 74888 . - . ID=gene-SO06_RS16710;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=SO06_RS16710 NZ_MYDG01000013.1 Protein Homology CDS 74193 74888 . - 0 ID=cds-WP_001221018.1;Parent=gene-SO06_RS16710;Dbxref=GenBank:WP_001221018.1;Name=WP_001221018.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=SO06_RS16710;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001221018.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 74946 76856 . - . ID=gene-SO06_RS16715;Name=SO06_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16715 NZ_MYDG01000013.1 Protein Homology CDS 74946 76856 . - 0 ID=cds-WP_023231923.1;Parent=gene-SO06_RS16715;Dbxref=GenBank:WP_023231923.1;Name=WP_023231923.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=SO06_RS16715;product=ATP-dependent DNA helicase;protein_id=WP_023231923.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 76988 77332 . + . ID=gene-SO06_RS16720;Name=SO06_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16720 NZ_MYDG01000013.1 Protein Homology CDS 76988 77332 . + 0 ID=cds-WP_000029550.1;Parent=gene-SO06_RS16720;Dbxref=GenBank:WP_000029550.1;Name=WP_000029550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=SO06_RS16720;product=RidA family protein;protein_id=WP_000029550.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 77338 77517 . - . ID=gene-SO06_RS16725;Name=SO06_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16725 NZ_MYDG01000013.1 Protein Homology CDS 77338 77517 . - 0 ID=cds-WP_000457328.1;Parent=gene-SO06_RS16725;Dbxref=GenBank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=SO06_RS16725;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 77598 78962 . + . ID=gene-SO06_RS16730;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=SO06_RS16730 NZ_MYDG01000013.1 Protein Homology CDS 77598 78962 . + 0 ID=cds-WP_000978460.1;Parent=gene-SO06_RS16730;Dbxref=GenBank:WP_000978460.1;Name=WP_000978460.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=SO06_RS16730;product=aminodeoxychorismate synthase component 1;protein_id=WP_000978460.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 78966 79544 . + . ID=gene-SO06_RS16735;Name=SO06_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16735 NZ_MYDG01000013.1 Protein Homology CDS 78966 79544 . + 0 ID=cds-WP_000381534.1;Parent=gene-SO06_RS16735;Dbxref=GenBank:WP_000381534.1;Name=WP_000381534.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=SO06_RS16735;product=CoA pyrophosphatase;protein_id=WP_000381534.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 79808 81172 . + . ID=gene-SO06_RS16740;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=SO06_RS16740 NZ_MYDG01000013.1 Protein Homology CDS 79808 81172 . + 0 ID=cds-WP_023231925.1;Parent=gene-SO06_RS16740;Dbxref=GenBank:WP_023231925.1;Name=WP_023231925.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=SO06_RS16740;product=L-serine ammonia-lyase;protein_id=WP_023231925.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 81310 82911 . + . ID=gene-SO06_RS16745;Name=SO06_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16745 NZ_MYDG01000013.1 Protein Homology CDS 81310 82911 . + 0 ID=cds-WP_001192519.1;Parent=gene-SO06_RS16745;Dbxref=GenBank:WP_001192519.1;Name=WP_001192519.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=SO06_RS16745;product=EAL domain-containing protein;protein_id=WP_001192519.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 82933 84492 . - . ID=gene-SO06_RS16750;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=SO06_RS16750 NZ_MYDG01000013.1 Protein Homology CDS 82933 84492 . - 0 ID=cds-WP_000421815.1;Parent=gene-SO06_RS16750;Dbxref=GenBank:WP_000421815.1;Name=WP_000421815.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=SO06_RS16750;product=CNNM family cation transport protein YoaE;protein_id=WP_000421815.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 84480 84812 . - . ID=gene-SO06_RS25820;Name=SO06_RS25820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25820 NZ_MYDG01000013.1 Protein Homology CDS 84480 84812 . - 0 ID=cds-WP_011233029.1;Parent=gene-SO06_RS25820;Dbxref=GenBank:WP_011233029.1;Name=WP_011233029.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.2;locus_tag=SO06_RS25820;product=protein YoaL;protein_id=WP_011233029.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 84965 85933 . + . ID=gene-SO06_RS16760;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=SO06_RS16760 NZ_MYDG01000013.1 Protein Homology CDS 84965 85933 . + 0 ID=cds-WP_000150523.1;Parent=gene-SO06_RS16760;Dbxref=GenBank:WP_000150523.1;Name=WP_000150523.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=SO06_RS16760;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150523.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 85986 86786 . + . ID=gene-SO06_RS16765;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=SO06_RS16765 NZ_MYDG01000013.1 Protein Homology CDS 85986 86786 . + 0 ID=cds-WP_000406918.1;Parent=gene-SO06_RS16765;Dbxref=GenBank:WP_000406918.1;Name=WP_000406918.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=SO06_RS16765;product=PTS mannose transporter subunit IIC;protein_id=WP_000406918.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 86799 87650 . + . ID=gene-SO06_RS16770;Name=SO06_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16770 NZ_MYDG01000013.1 Protein Homology CDS 86799 87650 . + 0 ID=cds-WP_001518647.1;Parent=gene-SO06_RS16770;Dbxref=GenBank:WP_001518647.1;Name=WP_001518647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=SO06_RS16770;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 87709 88167 . + . ID=gene-SO06_RS16775;Name=SO06_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16775 NZ_MYDG01000013.1 Protein Homology CDS 87709 88167 . + 0 ID=cds-WP_000156280.1;Parent=gene-SO06_RS16775;Dbxref=GenBank:WP_000156280.1;Name=WP_000156280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=SO06_RS16775;product=DUF986 family protein;protein_id=WP_000156280.1;transl_table=11 NZ_MYDG01000013.1 cmsearch riboswitch 88364 88465 . + . ID=id-NZ_MYDG01000013.1:88364..88465;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_MYDG01000013.1 RefSeq gene 88577 89143 . + . ID=gene-SO06_RS16785;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=SO06_RS16785 NZ_MYDG01000013.1 Protein Homology CDS 88577 89143 . + 0 ID=cds-WP_001518359.1;Parent=gene-SO06_RS16785;Dbxref=GenBank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=SO06_RS16785;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 89140 89949 . - . ID=gene-SO06_RS16790;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=SO06_RS16790 NZ_MYDG01000013.1 Protein Homology CDS 89140 89949 . - 0 ID=cds-WP_023232507.1;Parent=gene-SO06_RS16790;Dbxref=GenBank:WP_023232507.1;Name=WP_023232507.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=SO06_RS16790;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_023232507.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 90015 91760 . - . ID=gene-SO06_RS16795;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=SO06_RS16795 NZ_MYDG01000013.1 Protein Homology CDS 90015 91760 . - 0 ID=cds-WP_000730322.1;Parent=gene-SO06_RS16795;Dbxref=GenBank:WP_000730322.1;Name=WP_000730322.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=SO06_RS16795;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000730322.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 91980 92189 . - . ID=gene-SO06_RS16800;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=SO06_RS16800 NZ_MYDG01000013.1 Protein Homology CDS 91980 92189 . - 0 ID=cds-WP_001062678.1;Parent=gene-SO06_RS16800;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=SO06_RS16800;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 92202 92345 . - . ID=gene-SO06_RS16805;Name=SO06_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16805 NZ_MYDG01000013.1 Protein Homology CDS 92202 92345 . - 0 ID=cds-WP_001537930.1;Parent=gene-SO06_RS16805;Dbxref=GenBank:WP_001537930.1;Name=WP_001537930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=SO06_RS16805;product=DUF2627 domain-containing protein;protein_id=WP_001537930.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 92994 93281 . - . ID=gene-SO06_RS16810;Name=SO06_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16810 NZ_MYDG01000013.1 Protein Homology CDS 92994 93281 . - 0 ID=cds-WP_001000660.1;Parent=gene-SO06_RS16810;Dbxref=GenBank:WP_001000660.1;Name=WP_001000660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=SO06_RS16810;product=YebO family protein;protein_id=WP_001000660.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 93352 93495 . - . ID=gene-SO06_RS16815;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=SO06_RS16815 NZ_MYDG01000013.1 Protein Homology CDS 93352 93495 . - 0 ID=cds-WP_000714547.1;Parent=gene-SO06_RS16815;Dbxref=GenBank:WP_000714547.1;Name=WP_000714547.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=SO06_RS16815;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714547.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 93653 93892 . + . ID=gene-SO06_RS16820;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=SO06_RS16820 NZ_MYDG01000013.1 Protein Homology CDS 93653 93892 . + 0 ID=cds-WP_001236777.1;Parent=gene-SO06_RS16820;Dbxref=GenBank:WP_001236777.1;Name=WP_001236777.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=SO06_RS16820;product=invasion protein YobH;protein_id=WP_001236777.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 94104 94895 . - . ID=gene-SO06_RS16825;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=SO06_RS16825 NZ_MYDG01000013.1 Protein Homology CDS 94104 94895 . - 0 ID=cds-WP_001262195.1;Parent=gene-SO06_RS16825;Dbxref=GenBank:WP_001262195.1;Name=WP_001262195.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=SO06_RS16825;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262195.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 95071 96444 . + . ID=gene-SO06_RS16830;Name=SO06_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16830 NZ_MYDG01000013.1 Protein Homology CDS 95071 96444 . + 0 ID=cds-WP_000416139.1;Parent=gene-SO06_RS16830;Dbxref=GenBank:WP_000416139.1;Name=WP_000416139.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=SO06_RS16830;product=MFS transporter;protein_id=WP_000416139.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 96492 97373 . - . ID=gene-SO06_RS16835;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=SO06_RS16835 NZ_MYDG01000013.1 Protein Homology CDS 96492 97373 . - 0 ID=cds-WP_000984498.1;Parent=gene-SO06_RS16835;Dbxref=GenBank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=SO06_RS16835;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 97567 99615 . - . ID=gene-SO06_RS16840;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;gene_synonym=tsp;locus_tag=SO06_RS16840 NZ_MYDG01000013.1 Protein Homology CDS 97567 99615 . - 0 ID=cds-WP_001091237.1;Parent=gene-SO06_RS16840;Dbxref=GenBank:WP_001091237.1;Name=WP_001091237.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=SO06_RS16840;product=carboxy terminal-processing peptidase;protein_id=WP_001091237.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 99635 100321 . - . ID=gene-SO06_RS16845;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=SO06_RS16845 NZ_MYDG01000013.1 Protein Homology CDS 99635 100321 . - 0 ID=cds-WP_000431401.1;Parent=gene-SO06_RS16845;Dbxref=GenBank:WP_000431401.1;Name=WP_000431401.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=SO06_RS16845;product=RNA chaperone ProQ;protein_id=WP_000431401.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 100419 100916 . - . ID=gene-SO06_RS16850;Name=SO06_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16850 NZ_MYDG01000013.1 Protein Homology CDS 100419 100916 . - 0 ID=cds-WP_001518229.1;Parent=gene-SO06_RS16850;Dbxref=GenBank:WP_001518229.1;Name=WP_001518229.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=SO06_RS16850;product=GAF domain-containing protein;protein_id=WP_001518229.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 101045 102328 . + . ID=gene-SO06_RS16855;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=SO06_RS16855 NZ_MYDG01000013.1 Protein Homology CDS 101045 102328 . + 0 ID=cds-WP_001207293.1;Parent=gene-SO06_RS16855;Dbxref=GenBank:WP_001207293.1;Name=WP_001207293.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=SO06_RS16855;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207293.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 102297 104930 . + . ID=gene-SO06_RS16860;Name=SO06_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16860 NZ_MYDG01000013.1 Protein Homology CDS 102297 104930 . + 0 ID=cds-WP_001529852.1;Parent=gene-SO06_RS16860;Dbxref=GenBank:WP_001529852.1;Name=WP_001529852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=SO06_RS16860;product=PqiB family protein;protein_id=WP_001529852.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 105008 106447 . + . ID=gene-SO06_RS16865;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=SO06_RS16865 NZ_MYDG01000013.1 Protein Homology CDS 105008 106447 . + 0 ID=cds-WP_048348885.1;Parent=gene-SO06_RS16865;Dbxref=GenBank:WP_048348885.1;Name=WP_048348885.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=SO06_RS16865;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_048348885.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 106565 106801 . + . ID=gene-SO06_RS16870;Name=SO06_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16870 NZ_MYDG01000013.1 Protein Homology CDS 106565 106801 . + 0 ID=cds-WP_024131167.1;Parent=gene-SO06_RS16870;Dbxref=GenBank:WP_024131167.1;Name=WP_024131167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=SO06_RS16870;product=YebV family protein;protein_id=WP_024131167.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 106912 107103 . + . ID=gene-SO06_RS16875;Name=SO06_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16875 NZ_MYDG01000013.1 Protein Homology CDS 106912 107103 . + 0 ID=cds-WP_000457838.1;Parent=gene-SO06_RS16875;Dbxref=GenBank:WP_000457838.1;Name=WP_000457838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=SO06_RS16875;product=YebW family protein;protein_id=WP_000457838.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 107122 107772 . - . ID=gene-SO06_RS16880;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=SO06_RS16880 NZ_MYDG01000013.1 Protein Homology CDS 107122 107772 . - 0 ID=cds-WP_023226864.1;Parent=gene-SO06_RS16880;Dbxref=GenBank:WP_023226864.1;Name=WP_023226864.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=SO06_RS16880;product=protein-serine/threonine phosphatase;protein_id=WP_023226864.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 107997 108161 . - . ID=gene-SO06_RS16885;Name=SO06_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16885 NZ_MYDG01000013.1 Protein Homology CDS 107997 108161 . - 0 ID=cds-WP_023232530.1;Parent=gene-SO06_RS16885;Dbxref=GenBank:WP_023232530.1;Name=WP_023232530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=SO06_RS16885;product=hypothetical protein;protein_id=WP_023232530.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 108446 109168 . - . ID=gene-SO06_RS16890;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=SO06_RS16890 NZ_MYDG01000013.1 Protein Homology CDS 108446 109168 . - 0 ID=cds-WP_023232531.1;Parent=gene-SO06_RS16890;Dbxref=GenBank:WP_023232531.1;Name=WP_023232531.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=SO06_RS16890;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_023232531.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 109852 110247 . + . ID=gene-SO06_RS16895;Name=SO06_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16895 NZ_MYDG01000013.1 Protein Homology CDS 109852 110247 . + 0 ID=cds-WP_000422887.1;Parent=gene-SO06_RS16895;Dbxref=GenBank:WP_000422887.1;Name=WP_000422887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=SO06_RS16895;product=DUF1398 domain-containing protein;protein_id=WP_000422887.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 110575 111051 . + . ID=gene-SO06_RS16900;Name=SO06_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16900 NZ_MYDG01000013.1 Protein Homology CDS 110575 111051 . + 0 ID=cds-WP_023232532.1;Parent=gene-SO06_RS16900;Dbxref=GenBank:WP_023232532.1;Name=WP_023232532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=SO06_RS16900;product=hypothetical protein;protein_id=WP_023232532.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 111439 111858 . - . ID=gene-SO06_RS16905;Name=SO06_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16905 NZ_MYDG01000013.1 Protein Homology CDS 111439 111858 . - 0 ID=cds-WP_023232533.1;Parent=gene-SO06_RS16905;Dbxref=GenBank:WP_023232533.1;Name=WP_023232533.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=SO06_RS16905;product=GNAT family N-acetyltransferase;protein_id=WP_023232533.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 112226 112495 . + . ID=gene-SO06_RS16915;Name=SO06_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16915 NZ_MYDG01000013.1 Protein Homology CDS 112226 112495 . + 0 ID=cds-WP_077248370.1;Parent=gene-SO06_RS16915;Dbxref=GenBank:WP_077248370.1;Name=WP_077248370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=SO06_RS16915;product=hypothetical protein;protein_id=WP_077248370.1;transl_table=11 NZ_MYDG01000013.1 RefSeq gene 112661 112801 . + . ID=gene-SO06_RS16920;Name=SO06_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16920 NZ_MYDG01000013.1 Protein Homology CDS 112661 112801 . + 0 ID=cds-WP_048348799.1;Parent=gene-SO06_RS16920;Dbxref=GenBank:WP_048348799.1;Name=WP_048348799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460815.3;locus_tag=SO06_RS16920;product=hypothetical protein;protein_id=WP_048348799.1;transl_table=11 NZ_MYDG01000013.1 RefSeq pseudogene 112947 113474 . - . ID=gene-SO06_RS25585;Name=SO06_RS25585;end_range=113474,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25585;partial=true;pseudo=true NZ_MYDG01000013.1 Protein Homology CDS 112947 113474 . - 0 ID=cds-SO06_RS25585;Parent=gene-SO06_RS25585;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=113474,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=SO06_RS25585;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_MYDG01000013.1 RefSeq pseudogene 113481 113582 . - . ID=gene-SO06_RS25285;Name=SO06_RS25285;end_range=113582,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25285;partial=true;pseudo=true;start_range=.,113481 NZ_MYDG01000013.1 Protein Homology CDS 113481 113582 . - 0 ID=cds-SO06_RS25285;Parent=gene-SO06_RS25285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=113582,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=SO06_RS25285;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,113481;transl_table=11 NZ_MYDG01000013.1 RefSeq pseudogene 113616 115075 . - . ID=gene-SO06_RS16930;Name=sspH3;end_range=115075,.;gbkey=Gene;gene=sspH3;gene_biotype=pseudogene;locus_tag=SO06_RS16930;partial=true;pseudo=true NZ_MYDG01000013.1 Protein Homology CDS 113616 115075 . - 2 ID=cds-SO06_RS16930;Parent=gene-SO06_RS16930;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=115075,.;gbkey=CDS;gene=sspH3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_052938253.1;locus_tag=SO06_RS16930;partial=true;product=type III secretion system effector SspH3;pseudo=true;transl_table=11 ##sequence-region NZ_MYDG01000014.1 1 101589 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000014.1 RefSeq region 1 101589 . + . ID=NZ_MYDG01000014.1:1..101589;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000014.1 RefSeq pseudogene 14 2287 . - . ID=gene-SO06_RS16935;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=pseudogene;locus_tag=SO06_RS16935;partial=true;pseudo=true;start_range=.,14 NZ_MYDG01000014.1 Protein Homology CDS 14 2287 . - 0 ID=cds-SO06_RS16935;Parent=gene-SO06_RS16935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ftsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=SO06_RS16935;partial=true;product=DNA translocase FtsK;pseudo=true;start_range=.,14;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 2422 2916 . - . ID=gene-SO06_RS16940;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=SO06_RS16940 NZ_MYDG01000014.1 Protein Homology CDS 2422 2916 . - 0 ID=cds-WP_000228469.1;Parent=gene-SO06_RS16940;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=SO06_RS16940;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 3463 4431 . + . ID=gene-SO06_RS16950;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=SO06_RS16950 NZ_MYDG01000014.1 Protein Homology CDS 3463 4431 . + 0 ID=cds-WP_000537406.1;Parent=gene-SO06_RS16950;Dbxref=GenBank:WP_000537406.1;Name=WP_000537406.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=SO06_RS16950;product=thioredoxin-disulfide reductase;protein_id=WP_000537406.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 4545 6311 . + . ID=gene-SO06_RS16955;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=SO06_RS16955 NZ_MYDG01000014.1 Protein Homology CDS 4545 6311 . + 0 ID=cds-WP_001044541.1;Parent=gene-SO06_RS16955;Dbxref=GenBank:WP_001044541.1;Name=WP_001044541.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=SO06_RS16955;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001044541.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 6312 8033 . + . ID=gene-SO06_RS16960;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=SO06_RS16960 NZ_MYDG01000014.1 Protein Homology CDS 6312 8033 . + 0 ID=cds-WP_001202256.1;Parent=gene-SO06_RS16960;Dbxref=GenBank:WP_001202256.1;Name=WP_001202256.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=SO06_RS16960;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202256.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 8078 8782 . + . ID=gene-SO06_RS16965;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=SO06_RS16965 NZ_MYDG01000014.1 Protein Homology CDS 8078 8782 . + 0 ID=cds-WP_001241650.1;Parent=gene-SO06_RS16965;Dbxref=GenBank:WP_001241650.1;Name=WP_001241650.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=SO06_RS16965;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241650.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 9094 9312 . + . ID=gene-SO06_RS16975;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=SO06_RS16975 NZ_MYDG01000014.1 Protein Homology CDS 9094 9312 . + 0 ID=cds-WP_001040187.1;Parent=gene-SO06_RS16975;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=SO06_RS16975;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 9403 10314 . - . ID=gene-SO06_RS16980;Name=SO06_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16980 NZ_MYDG01000014.1 Protein Homology CDS 9403 10314 . - 0 ID=cds-WP_000597928.1;Parent=gene-SO06_RS16980;Dbxref=GenBank:WP_000597928.1;Name=WP_000597928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=SO06_RS16980;product=LysR family transcriptional regulator;protein_id=WP_000597928.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 10423 11283 . + . ID=gene-SO06_RS16985;Name=SO06_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16985 NZ_MYDG01000014.1 Protein Homology CDS 10423 11283 . + 0 ID=cds-WP_000809969.1;Parent=gene-SO06_RS16985;Dbxref=GenBank:WP_000809969.1;Name=WP_000809969.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=SO06_RS16985;product=pirin family protein;protein_id=WP_000809969.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 11303 11980 . + . ID=gene-SO06_RS16990;Name=SO06_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS16990 NZ_MYDG01000014.1 Protein Homology CDS 11303 11980 . + 0 ID=cds-WP_000097893.1;Parent=gene-SO06_RS16990;Dbxref=GenBank:WP_000097893.1;Name=WP_000097893.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=SO06_RS16990;product=hydrolase;protein_id=WP_000097893.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 12129 12216 . + . ID=gene-SO06_RS16995;Name=SO06_RS16995;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS16995 NZ_MYDG01000014.1 tRNAscan-SE tRNA 12129 12216 . + . ID=rna-SO06_RS16995;Parent=gene-SO06_RS16995;anticodon=(pos:12163..12165);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS16995;product=tRNA-Ser NZ_MYDG01000014.1 tRNAscan-SE exon 12129 12216 . + . ID=exon-SO06_RS16995-1;Parent=rna-SO06_RS16995;anticodon=(pos:12163..12165);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS16995;product=tRNA-Ser NZ_MYDG01000014.1 RefSeq gene 12592 14868 . - . ID=gene-SO06_RS17005;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=SO06_RS17005 NZ_MYDG01000014.1 Protein Homology CDS 12592 14868 . - 0 ID=cds-WP_000934064.1;Parent=gene-SO06_RS17005;Dbxref=GenBank:WP_000934064.1;Name=WP_000934064.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=SO06_RS17005;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934064.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 14899 15219 . - . ID=gene-SO06_RS17010;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=SO06_RS17010 NZ_MYDG01000014.1 Protein Homology CDS 14899 15219 . - 0 ID=cds-WP_000520789.1;Parent=gene-SO06_RS17010;Dbxref=GenBank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=SO06_RS17010;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 15315 15392 . - . ID=gene-SO06_RS25375;Name=SO06_RS25375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25375 NZ_MYDG01000014.1 Protein Homology CDS 15315 15392 . - 0 ID=cds-WP_212742690.1;Parent=gene-SO06_RS25375;Dbxref=GenBank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=SO06_RS25375;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 15543 15764 . + . ID=gene-SO06_RS17015;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=SO06_RS17015 NZ_MYDG01000014.1 Protein Homology CDS 15543 15764 . + 0 ID=cds-WP_000447499.1;Parent=gene-SO06_RS17015;Dbxref=GenBank:WP_000447499.1;Name=WP_000447499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=SO06_RS17015;product=cold shock-like protein CspD;protein_id=WP_000447499.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 15894 17840 . - . ID=gene-SO06_RS17025;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=SO06_RS17025 NZ_MYDG01000014.1 Protein Homology CDS 15894 17840 . - 0 ID=cds-WP_048348817.1;Parent=gene-SO06_RS17025;Dbxref=GenBank:WP_048348817.1;Name=WP_048348817.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=SO06_RS17025;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_048348817.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 17837 18955 . - . ID=gene-SO06_RS17030;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=SO06_RS17030 NZ_MYDG01000014.1 Protein Homology CDS 17837 18955 . - 0 ID=cds-WP_001201754.1;Parent=gene-SO06_RS17030;Dbxref=GenBank:WP_001201754.1;Name=WP_001201754.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=SO06_RS17030;product=macrolide transporter subunit MacA;protein_id=WP_001201754.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 19101 20051 . + . ID=gene-SO06_RS17035;Name=SO06_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17035 NZ_MYDG01000014.1 Protein Homology CDS 19101 20051 . + 0 ID=cds-WP_001537300.1;Parent=gene-SO06_RS17035;Dbxref=GenBank:WP_001537300.1;Name=WP_001537300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=SO06_RS17035;product=VirK/YbjX family protein;protein_id=WP_001537300.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 20048 21706 . - . ID=gene-SO06_RS17040;Name=SO06_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17040 NZ_MYDG01000014.1 Protein Homology CDS 20048 21706 . - 0 ID=cds-WP_000599765.1;Parent=gene-SO06_RS17040;Dbxref=GenBank:WP_000599765.1;Name=WP_000599765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=SO06_RS17040;product=ATP-dependent endonuclease;protein_id=WP_000599765.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 21908 22807 . + . ID=gene-SO06_RS17050;Name=SO06_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17050 NZ_MYDG01000014.1 Protein Homology CDS 21908 22807 . + 0 ID=cds-WP_000491118.1;Parent=gene-SO06_RS17050;Dbxref=GenBank:WP_000491118.1;Name=WP_000491118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=SO06_RS17050;product=lysine exporter LysO family protein;protein_id=WP_000491118.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 22951 24603 . + . ID=gene-SO06_RS17055;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=SO06_RS17055 NZ_MYDG01000014.1 Protein Homology CDS 22951 24603 . + 0 ID=cds-WP_000458776.1;Parent=gene-SO06_RS17055;Dbxref=GenBank:WP_000458776.1;Name=WP_000458776.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=SO06_RS17055;product=hydroxylamine reductase;protein_id=WP_000458776.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 24615 25583 . + . ID=gene-SO06_RS17060;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=SO06_RS17060 NZ_MYDG01000014.1 Protein Homology CDS 24615 25583 . + 0 ID=cds-WP_023216393.1;Parent=gene-SO06_RS17060;Dbxref=GenBank:WP_023216393.1;Name=WP_023216393.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=SO06_RS17060;product=NADH oxidoreductase;protein_id=WP_023216393.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 25741 27459 . + . ID=gene-SO06_RS17065;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=SO06_RS17065 NZ_MYDG01000014.1 Protein Homology CDS 25741 27459 . + 0 ID=cds-WP_000815309.1;Parent=gene-SO06_RS17065;Dbxref=GenBank:WP_000815309.1;Name=WP_000815309.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=SO06_RS17065;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815309.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 27498 28499 . + . ID=gene-SO06_RS17070;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=SO06_RS17070 NZ_MYDG01000014.1 Protein Homology CDS 27498 28499 . + 0 ID=cds-WP_000566346.1;Parent=gene-SO06_RS17070;Dbxref=GenBank:WP_000566346.1;Name=WP_000566346.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=SO06_RS17070;product=low-specificity L-threonine aldolase;protein_id=WP_000566346.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 28510 29943 . + . ID=gene-SO06_RS17075;Name=SO06_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17075 NZ_MYDG01000014.1 Protein Homology CDS 28510 29943 . + 0 ID=cds-WP_023232205.1;Parent=gene-SO06_RS17075;Dbxref=GenBank:WP_023232205.1;Name=WP_023232205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=SO06_RS17075;product=SDR family oxidoreductase;protein_id=WP_023232205.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 30039 31052 . + . ID=gene-SO06_RS17080;Name=SO06_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17080 NZ_MYDG01000014.1 Protein Homology CDS 30039 31052 . + 0 ID=cds-WP_000866904.1;Parent=gene-SO06_RS17080;Dbxref=GenBank:WP_000866904.1;Name=WP_000866904.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=SO06_RS17080;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_000866904.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 31049 31879 . - . ID=gene-SO06_RS17085;Name=SO06_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17085 NZ_MYDG01000014.1 Protein Homology CDS 31049 31879 . - 0 ID=cds-WP_023203679.1;Parent=gene-SO06_RS17085;Dbxref=GenBank:WP_023203679.1;Name=WP_023203679.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=SO06_RS17085;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_023203679.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 31876 32199 . - . ID=gene-SO06_RS17090;Name=SO06_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17090 NZ_MYDG01000014.1 Protein Homology CDS 31876 32199 . - 0 ID=cds-WP_001160725.1;Parent=gene-SO06_RS17090;Dbxref=GenBank:WP_001160725.1;Name=WP_001160725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=SO06_RS17090;product=heavy metal-binding domain-containing protein;protein_id=WP_001160725.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 32327 32842 . + . ID=gene-SO06_RS17095;Name=SO06_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17095 NZ_MYDG01000014.1 Protein Homology CDS 32327 32842 . + 0 ID=cds-WP_001270724.1;Parent=gene-SO06_RS17095;Dbxref=GenBank:WP_001270724.1;Name=WP_001270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=SO06_RS17095;product=lipoprotein;protein_id=WP_001270724.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 33071 33799 . + . ID=gene-SO06_RS17100;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=SO06_RS17100 NZ_MYDG01000014.1 Protein Homology CDS 33071 33799 . + 0 ID=cds-WP_000027186.1;Parent=gene-SO06_RS17100;Dbxref=GenBank:WP_000027186.1;Name=WP_000027186.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=SO06_RS17100;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 33817 34548 . + . ID=gene-SO06_RS17105;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=SO06_RS17105 NZ_MYDG01000014.1 Protein Homology CDS 33817 34548 . + 0 ID=cds-WP_000756587.1;Parent=gene-SO06_RS17105;Dbxref=GenBank:WP_000756587.1;Name=WP_000756587.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=SO06_RS17105;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756587.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 34555 35271 . + . ID=gene-SO06_RS17110;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=SO06_RS17110 NZ_MYDG01000014.1 Protein Homology CDS 34555 35271 . + 0 ID=cds-WP_001001677.1;Parent=gene-SO06_RS17110;Dbxref=GenBank:WP_001001677.1;Name=WP_001001677.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=SO06_RS17110;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 35271 35939 . + . ID=gene-SO06_RS17115;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=SO06_RS17115 NZ_MYDG01000014.1 Protein Homology CDS 35271 35939 . + 0 ID=cds-WP_000895396.1;Parent=gene-SO06_RS17115;Dbxref=GenBank:WP_000895396.1;Name=WP_000895396.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=SO06_RS17115;product=arginine ABC transporter permease ArtM;protein_id=WP_000895396.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 36176 36907 . + . ID=gene-SO06_RS17120;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=SO06_RS17120 NZ_MYDG01000014.1 Protein Homology CDS 36176 36907 . + 0 ID=cds-WP_000737538.1;Parent=gene-SO06_RS17120;Dbxref=GenBank:WP_000737538.1;Name=WP_000737538.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=SO06_RS17120;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_000737538.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 37127 38614 . - . ID=gene-SO06_RS17125;Name=SO06_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17125 NZ_MYDG01000014.1 Protein Homology CDS 37127 38614 . - 0 ID=cds-WP_023232356.1;Parent=gene-SO06_RS17125;Dbxref=GenBank:WP_023232356.1;Name=WP_023232356.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=SO06_RS17125;product=sulfatase;protein_id=WP_023232356.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 38624 38944 . - . ID=gene-SO06_RS17130;Name=SO06_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17130 NZ_MYDG01000014.1 Protein Homology CDS 38624 38944 . - 0 ID=cds-WP_000655399.1;Parent=gene-SO06_RS17130;Dbxref=GenBank:WP_000655399.1;Name=WP_000655399.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=SO06_RS17130;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 38974 40317 . - . ID=gene-SO06_RS17135;Name=SO06_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17135 NZ_MYDG01000014.1 Protein Homology CDS 38974 40317 . - 0 ID=cds-WP_000399323.1;Parent=gene-SO06_RS17135;Dbxref=GenBank:WP_000399323.1;Name=WP_000399323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=SO06_RS17135;product=PTS sugar transporter subunit IIC;protein_id=WP_000399323.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 40600 41730 . - . ID=gene-SO06_RS17140;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=SO06_RS17140 NZ_MYDG01000014.1 Protein Homology CDS 40600 41730 . - 0 ID=cds-WP_023209111.1;Parent=gene-SO06_RS17140;Dbxref=GenBank:WP_023209111.1;Name=WP_023209111.1;Ontology_term=GO:0000154,GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459859.1;locus_tag=SO06_RS17140;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_023209111.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 41773 42246 . - . ID=gene-SO06_RS17145;Name=SO06_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17145 NZ_MYDG01000014.1 Protein Homology CDS 41773 42246 . - 0 ID=cds-WP_001668047.1;Parent=gene-SO06_RS17145;Dbxref=GenBank:WP_001668047.1;Name=WP_001668047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=SO06_RS17145;product=YbjO family protein;protein_id=WP_001668047.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 42320 43165 . - . ID=gene-SO06_RS17150;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=SO06_RS17150 NZ_MYDG01000014.1 Protein Homology CDS 42320 43165 . - 0 ID=cds-WP_001061629.1;Parent=gene-SO06_RS17150;Dbxref=GenBank:WP_001061629.1;Name=WP_001061629.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=SO06_RS17150;product=putrescine ABC transporter permease PotI;protein_id=WP_001061629.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 43162 44115 . - . ID=gene-SO06_RS17155;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=SO06_RS17155 NZ_MYDG01000014.1 Protein Homology CDS 43162 44115 . - 0 ID=cds-WP_023232354.1;Parent=gene-SO06_RS17155;Dbxref=GenBank:WP_023232354.1;Name=WP_023232354.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=SO06_RS17155;product=putrescine ABC transporter permease PotH;protein_id=WP_023232354.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 44125 45258 . - . ID=gene-SO06_RS17160;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=SO06_RS17160 NZ_MYDG01000014.1 Protein Homology CDS 44125 45258 . - 0 ID=cds-WP_001000698.1;Parent=gene-SO06_RS17160;Dbxref=GenBank:WP_001000698.1;Name=WP_001000698.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=SO06_RS17160;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_001000698.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 45346 46458 . - . ID=gene-SO06_RS17165;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=SO06_RS17165 NZ_MYDG01000014.1 Protein Homology CDS 45346 46458 . - 0 ID=cds-WP_000125769.1;Parent=gene-SO06_RS17165;Dbxref=GenBank:WP_000125769.1;Name=WP_000125769.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=SO06_RS17165;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000125769.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 46807 47283 . - . ID=gene-SO06_RS17170;Name=SO06_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17170 NZ_MYDG01000014.1 Protein Homology CDS 46807 47283 . - 0 ID=cds-WP_000624811.1;Parent=gene-SO06_RS17170;Dbxref=GenBank:WP_000624811.1;Name=WP_000624811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=SO06_RS17170;product=YbjN domain-containing protein;protein_id=WP_000624811.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 47380 48282 . - . ID=gene-SO06_RS17175;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=SO06_RS17175 NZ_MYDG01000014.1 Protein Homology CDS 47380 48282 . - 0 ID=cds-WP_000684361.1;Parent=gene-SO06_RS17175;Dbxref=GenBank:WP_000684361.1;Name=WP_000684361.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=SO06_RS17175;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684361.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 48340 49062 . - . ID=gene-SO06_RS17180;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=SO06_RS17180 NZ_MYDG01000014.1 Protein Homology CDS 48340 49062 . - 0 ID=cds-WP_000075300.1;Parent=gene-SO06_RS17180;Dbxref=GenBank:WP_000075300.1;Name=WP_000075300.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=SO06_RS17180;product=nitroreductase NfsA;protein_id=WP_000075300.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 49046 49336 . - . ID=gene-SO06_RS17185;Name=SO06_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17185 NZ_MYDG01000014.1 Protein Homology CDS 49046 49336 . - 0 ID=cds-WP_001259137.1;Parent=gene-SO06_RS17185;Dbxref=GenBank:WP_001259137.1;Name=WP_001259137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=SO06_RS17185;product=YbjC family protein;protein_id=WP_001259137.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 49506 49769 . + . ID=gene-SO06_RS17190;Name=SO06_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17190 NZ_MYDG01000014.1 Protein Homology CDS 49506 49769 . + 0 ID=cds-WP_000495513.1;Parent=gene-SO06_RS17190;Dbxref=GenBank:WP_000495513.1;Name=WP_000495513.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=SO06_RS17190;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 49801 50178 . - . ID=gene-SO06_RS17195;Name=SO06_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17195 NZ_MYDG01000014.1 Protein Homology CDS 49801 50178 . - 0 ID=cds-WP_000680850.1;Parent=gene-SO06_RS17195;Dbxref=GenBank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=SO06_RS17195;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 50449 52134 . + . ID=gene-SO06_RS17200;Name=SO06_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17200 NZ_MYDG01000014.1 Protein Homology CDS 50449 52134 . + 0 ID=cds-WP_001024853.1;Parent=gene-SO06_RS17200;Dbxref=GenBank:WP_001024853.1;Name=WP_001024853.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=SO06_RS17200;product=aspartate:alanine antiporter;protein_id=WP_001024853.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 52251 52871 . - . ID=gene-SO06_RS17205;Name=SO06_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17205 NZ_MYDG01000014.1 Protein Homology CDS 52251 52871 . - 0 ID=cds-WP_023232233.1;Parent=gene-SO06_RS17205;Dbxref=GenBank:WP_023232233.1;Name=WP_023232233.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=SO06_RS17205;product=TetR/AcrR family transcriptional regulator;protein_id=WP_023232233.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 53039 54250 . + . ID=gene-SO06_RS17210;Name=SO06_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17210 NZ_MYDG01000014.1 Protein Homology CDS 53039 54250 . + 0 ID=cds-WP_000217430.1;Parent=gene-SO06_RS17210;Dbxref=GenBank:WP_000217430.1;Name=WP_000217430.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=SO06_RS17210;product=MFS transporter;protein_id=WP_000217430.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 54247 55062 . + . ID=gene-SO06_RS17215;Name=SO06_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17215 NZ_MYDG01000014.1 Protein Homology CDS 54247 55062 . + 0 ID=cds-WP_000023554.1;Parent=gene-SO06_RS17215;Dbxref=GenBank:WP_000023554.1;Name=WP_000023554.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=SO06_RS17215;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000023554.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 55116 56348 . - . ID=gene-SO06_RS17220;Name=SO06_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17220 NZ_MYDG01000014.1 Protein Homology CDS 55116 56348 . - 0 ID=cds-WP_001181284.1;Parent=gene-SO06_RS17220;Dbxref=GenBank:WP_001181284.1;Name=WP_001181284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=SO06_RS17220;product=MFS transporter;protein_id=WP_001181284.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 56661 57269 . + . ID=gene-SO06_RS17225;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=SO06_RS17225 NZ_MYDG01000014.1 Protein Homology CDS 56661 57269 . + 0 ID=cds-WP_023181381.1;Parent=gene-SO06_RS17225;Dbxref=GenBank:WP_023181381.1;Name=WP_023181381.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=SO06_RS17225;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_023181381.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 57341 58099 . + . ID=gene-SO06_RS17230;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=SO06_RS17230 NZ_MYDG01000014.1 Protein Homology CDS 57341 58099 . + 0 ID=cds-WP_000450103.1;Parent=gene-SO06_RS17230;Dbxref=GenBank:WP_000450103.1;Name=WP_000450103.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=SO06_RS17230;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450103.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 58145 59347 . - . ID=gene-SO06_RS17235;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=SO06_RS17235 NZ_MYDG01000014.1 Protein Homology CDS 58145 59347 . - 0 ID=cds-WP_000195712.1;Parent=gene-SO06_RS17235;Dbxref=GenBank:WP_000195712.1;Name=WP_000195712.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=SO06_RS17235;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195712.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 59591 60217 . + . ID=gene-SO06_RS17240;Name=SO06_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17240 NZ_MYDG01000014.1 Protein Homology CDS 59591 60217 . + 0 ID=cds-WP_000631907.1;Parent=gene-SO06_RS17240;Dbxref=GenBank:WP_000631907.1;Name=WP_000631907.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=SO06_RS17240;product=glutathione S-transferase family protein;protein_id=WP_000631907.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 60214 61335 . - . ID=gene-SO06_RS17245;Name=SO06_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17245 NZ_MYDG01000014.1 Protein Homology CDS 60214 61335 . - 0 ID=cds-WP_001252730.1;Parent=gene-SO06_RS17245;Dbxref=GenBank:WP_001252730.1;Name=WP_001252730.1;Ontology_term=GO:0016901,GO:0070968;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA,pyrroloquinoline quinone binding|0070968||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252732.1;locus_tag=SO06_RS17245;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_001252730.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 61454 61837 . - . ID=gene-SO06_RS17250;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=SO06_RS17250 NZ_MYDG01000014.1 Protein Homology CDS 61454 61837 . - 0 ID=cds-WP_000259651.1;Parent=gene-SO06_RS17250;Dbxref=GenBank:WP_000259651.1;Name=WP_000259651.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=SO06_RS17250;product=biofilm formation regulator BssR;protein_id=WP_000259651.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 62068 63393 . + . ID=gene-SO06_RS17255;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=SO06_RS17255 NZ_MYDG01000014.1 Protein Homology CDS 62068 63393 . + 0 ID=cds-WP_000073317.1;Parent=gene-SO06_RS17255;Dbxref=GenBank:WP_000073317.1;Name=WP_000073317.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=SO06_RS17255;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000073317.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 63484 64395 . - . ID=gene-SO06_RS17260;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=SO06_RS17260 NZ_MYDG01000014.1 Protein Homology CDS 63484 64395 . - 0 ID=cds-WP_001236024.1;Parent=gene-SO06_RS17260;Dbxref=GenBank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=SO06_RS17260;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 64398 65318 . - . ID=gene-SO06_RS17265;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=SO06_RS17265 NZ_MYDG01000014.1 Protein Homology CDS 64398 65318 . - 0 ID=cds-WP_000936066.1;Parent=gene-SO06_RS17265;Dbxref=GenBank:WP_000936066.1;Name=WP_000936066.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=SO06_RS17265;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936066.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 65379 66917 . - . ID=gene-SO06_RS17270;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=SO06_RS17270 NZ_MYDG01000014.1 Protein Homology CDS 65379 66917 . - 0 ID=cds-WP_000191427.1;Parent=gene-SO06_RS17270;Dbxref=GenBank:WP_000191427.1;Name=WP_000191427.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=SO06_RS17270;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000191427.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 66950 68821 . - . ID=gene-SO06_RS17275;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=SO06_RS17275 NZ_MYDG01000014.1 Protein Homology CDS 66950 68821 . - 0 ID=cds-WP_001120598.1;Parent=gene-SO06_RS17275;Dbxref=GenBank:WP_001120598.1;Name=WP_001120598.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=SO06_RS17275;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001120598.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 68832 69773 . - . ID=gene-SO06_RS17280;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=SO06_RS17280 NZ_MYDG01000014.1 Protein Homology CDS 68832 69773 . - 0 ID=cds-WP_001030503.1;Parent=gene-SO06_RS17280;Dbxref=GenBank:WP_001030503.1;Name=WP_001030503.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=SO06_RS17280;product=beta-aspartyl-peptidase;protein_id=WP_001030503.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 69977 71212 . + . ID=gene-SO06_RS17285;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=SO06_RS17285 NZ_MYDG01000014.1 Protein Homology CDS 69977 71212 . + 0 ID=cds-WP_000395792.1;Parent=gene-SO06_RS17285;Dbxref=GenBank:WP_000395792.1;Name=WP_000395792.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=SO06_RS17285;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000395792.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 71212 71961 . + . ID=gene-SO06_RS17290;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=SO06_RS17290 NZ_MYDG01000014.1 Protein Homology CDS 71212 71961 . + 0 ID=cds-WP_000829280.1;Parent=gene-SO06_RS17290;Dbxref=GenBank:WP_000829280.1;Name=WP_000829280.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=SO06_RS17290;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829280.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 72239 73138 . + . ID=gene-SO06_RS17295;Name=SO06_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17295 NZ_MYDG01000014.1 Protein Homology CDS 72239 73138 . + 0 ID=cds-WP_000576947.1;Parent=gene-SO06_RS17295;Dbxref=GenBank:WP_000576947.1;Name=WP_000576947.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=SO06_RS17295;product=glycyl-radical enzyme activating protein;protein_id=WP_000576947.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 73144 75576 . + . ID=gene-SO06_RS17300;Name=SO06_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17300 NZ_MYDG01000014.1 Protein Homology CDS 73144 75576 . + 0 ID=cds-WP_023258304.1;Parent=gene-SO06_RS17300;Dbxref=GenBank:WP_023258304.1;Name=WP_023258304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=SO06_RS17300;product=glycyl radical protein;protein_id=WP_023258304.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 75654 76463 . - . ID=gene-SO06_RS17305;Name=SO06_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17305 NZ_MYDG01000014.1 Protein Homology CDS 75654 76463 . - 0 ID=cds-WP_000217910.1;Parent=gene-SO06_RS17305;Dbxref=GenBank:WP_000217910.1;Name=WP_000217910.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=SO06_RS17305;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217910.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 76725 77990 . + . ID=gene-SO06_RS17310;Name=SO06_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17310 NZ_MYDG01000014.1 Protein Homology CDS 76725 77990 . + 0 ID=cds-WP_001586229.1;Parent=gene-SO06_RS17310;Dbxref=GenBank:WP_001586229.1;Name=WP_001586229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=SO06_RS17310;product=DUF1479 domain-containing protein;protein_id=WP_001586229.1;transl_table=11 NZ_MYDG01000014.1 RefSeq pseudogene 78112 78195 . - . ID=gene-SO06_RS25825;Name=SO06_RS25825;end_range=78195,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25825;partial=true;pseudo=true NZ_MYDG01000014.1 Protein Homology CDS 78112 78195 . - 0 ID=cds-SO06_RS25825;Parent=gene-SO06_RS25825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=78195,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=SO06_RS25825;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000014.1 RefSeq pseudogene 78186 78914 . + . ID=gene-SO06_RS17315;Name=SO06_RS17315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS17315;partial=true;pseudo=true;start_range=.,78186 NZ_MYDG01000014.1 Protein Homology CDS 78186 78914 . + 0 ID=cds-SO06_RS17315;Parent=gene-SO06_RS17315;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114249.1;locus_tag=SO06_RS17315;partial=true;product=Cof-type HAD-IIB family hydrolase;pseudo=true;start_range=.,78186;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 78943 79686 . - . ID=gene-SO06_RS17320;Name=SO06_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17320 NZ_MYDG01000014.1 Protein Homology CDS 78943 79686 . - 0 ID=cds-WP_077910764.1;Parent=gene-SO06_RS17320;Dbxref=GenBank:WP_077910764.1;Name=WP_077910764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459816.1;locus_tag=SO06_RS17320;product=DUF4261 domain-containing protein;protein_id=WP_077910764.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 80234 81826 . - . ID=gene-SO06_RS17330;Name=SO06_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17330 NZ_MYDG01000014.1 Protein Homology CDS 80234 81826 . - 0 ID=cds-WP_000961479.1;Parent=gene-SO06_RS17330;Dbxref=GenBank:WP_000961479.1;Name=WP_000961479.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459815.1;locus_tag=SO06_RS17330;product=ABC-F family ATPase;protein_id=WP_000961479.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 82045 82965 . + . ID=gene-SO06_RS17335;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=SO06_RS17335 NZ_MYDG01000014.1 Protein Homology CDS 82045 82965 . + 0 ID=cds-WP_001056404.1;Parent=gene-SO06_RS17335;Dbxref=GenBank:WP_001056404.1;Name=WP_001056404.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=SO06_RS17335;product=L%2CD-transpeptidase;protein_id=WP_001056404.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 83009 84121 . - . ID=gene-SO06_RS17340;Name=SO06_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17340 NZ_MYDG01000014.1 Protein Homology CDS 83009 84121 . - 0 ID=cds-WP_001046525.1;Parent=gene-SO06_RS17340;Dbxref=GenBank:WP_001046525.1;Name=WP_001046525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=SO06_RS17340;product=anion transporter;protein_id=WP_001046525.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 84118 84591 . - . ID=gene-SO06_RS17345;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=SO06_RS17345 NZ_MYDG01000014.1 Protein Homology CDS 84118 84591 . - 0 ID=cds-WP_000533542.1;Parent=gene-SO06_RS17345;Dbxref=GenBank:WP_000533542.1;Name=WP_000533542.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=SO06_RS17345;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000533542.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 84777 84905 . + . ID=gene-SO06_RS17350;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=SO06_RS17350 NZ_MYDG01000014.1 Protein Homology CDS 84777 84905 . + 0 ID=cds-WP_001001755.1;Parent=gene-SO06_RS17350;Dbxref=GenBank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=SO06_RS17350;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 85170 86750 . + . ID=gene-SO06_RS17355;Name=SO06_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17355 NZ_MYDG01000014.1 Protein Homology CDS 85170 86750 . + 0 ID=cds-WP_001089328.1;Parent=gene-SO06_RS17355;Dbxref=GenBank:WP_001089328.1;Name=WP_001089328.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=SO06_RS17355;product=phosphoethanolamine transferase;protein_id=WP_001089328.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 86813 87328 . - . ID=gene-SO06_RS17360;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=SO06_RS17360 NZ_MYDG01000014.1 Protein Homology CDS 86813 87328 . - 0 ID=cds-WP_000716763.1;Parent=gene-SO06_RS17360;Dbxref=GenBank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=SO06_RS17360;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 87682 88569 . + . ID=gene-SO06_RS17365;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=SO06_RS17365 NZ_MYDG01000014.1 Protein Homology CDS 87682 88569 . + 0 ID=cds-WP_001119555.1;Parent=gene-SO06_RS17365;Dbxref=GenBank:WP_001119555.1;Name=WP_001119555.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=SO06_RS17365;product=threonine/homoserine exporter RhtA;protein_id=WP_001119555.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 88872 89375 . + . ID=gene-SO06_RS17370;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=SO06_RS17370 NZ_MYDG01000014.1 Protein Homology CDS 88872 89375 . + 0 ID=cds-WP_000100805.1;Parent=gene-SO06_RS17370;Dbxref=GenBank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=SO06_RS17370;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 89852 90598 . + . ID=gene-SO06_RS17375;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=SO06_RS17375 NZ_MYDG01000014.1 Protein Homology CDS 89852 90598 . + 0 ID=cds-WP_000838671.1;Parent=gene-SO06_RS17375;Dbxref=GenBank:WP_000838671.1;Name=WP_000838671.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=SO06_RS17375;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000838671.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 90744 91403 . + . ID=gene-SO06_RS17380;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=SO06_RS17380 NZ_MYDG01000014.1 Protein Homology CDS 90744 91403 . + 0 ID=cds-WP_001159076.1;Parent=gene-SO06_RS17380;Dbxref=GenBank:WP_001159076.1;Name=WP_001159076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=SO06_RS17380;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 91400 92122 . + . ID=gene-SO06_RS17385;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=SO06_RS17385 NZ_MYDG01000014.1 Protein Homology CDS 91400 92122 . + 0 ID=cds-WP_000569093.1;Parent=gene-SO06_RS17385;Dbxref=GenBank:WP_000569093.1;Name=WP_000569093.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=SO06_RS17385;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569093.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 92241 94463 . + . ID=gene-SO06_RS17390;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=SO06_RS17390 NZ_MYDG01000014.1 Protein Homology CDS 92241 94463 . + 0 ID=cds-WP_001267702.1;Parent=gene-SO06_RS17390;Dbxref=GenBank:WP_001267702.1;Name=WP_001267702.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=SO06_RS17390;product=mechanosensitive channel protein;protein_id=WP_001267702.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 94460 95386 . - . ID=gene-SO06_RS17395;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=SO06_RS17395 NZ_MYDG01000014.1 Protein Homology CDS 94460 95386 . - 0 ID=cds-WP_001275964.1;Parent=gene-SO06_RS17395;Dbxref=GenBank:WP_001275964.1;Name=WP_001275964.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=SO06_RS17395;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275964.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 95591 95857 . + . ID=gene-SO06_RS17400;Name=SO06_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17400 NZ_MYDG01000014.1 Protein Homology CDS 95591 95857 . + 0 ID=cds-WP_000146330.1;Parent=gene-SO06_RS17400;Dbxref=GenBank:WP_000146330.1;Name=WP_000146330.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=SO06_RS17400;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146330.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 96142 96402 . + . ID=gene-SO06_RS17405;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=SO06_RS17405 NZ_MYDG01000014.1 Protein Homology CDS 96142 96402 . + 0 ID=cds-WP_000849089.1;Parent=gene-SO06_RS17405;Dbxref=GenBank:WP_000849089.1;Name=WP_000849089.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=SO06_RS17405;product=DUF1471 family protein YbiJ;protein_id=WP_000849089.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 96558 97532 . - . ID=gene-SO06_RS17410;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=SO06_RS17410 NZ_MYDG01000014.1 Protein Homology CDS 96558 97532 . - 0 ID=cds-WP_023138452.1;Parent=gene-SO06_RS17410;Dbxref=GenBank:WP_023138452.1;Name=WP_023138452.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=SO06_RS17410;product=DNA-binding protein YbiB;protein_id=WP_023138452.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 97562 99706 . - . ID=gene-SO06_RS17415;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=SO06_RS17415 NZ_MYDG01000014.1 Protein Homology CDS 97562 99706 . - 0 ID=cds-WP_001218630.1;Parent=gene-SO06_RS17415;Dbxref=GenBank:WP_001218630.1;Name=WP_001218630.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=SO06_RS17415;product=ATP-dependent DNA helicase DinG;protein_id=WP_001218630.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 99914 101278 . - . ID=gene-SO06_RS17420;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=SO06_RS17420 NZ_MYDG01000014.1 Protein Homology CDS 99914 101278 . - 0 ID=cds-WP_023232305.1;Parent=gene-SO06_RS17420;Dbxref=GenBank:WP_023232305.1;Name=WP_023232305.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=SO06_RS17420;product=ATP-dependent RNA helicase RhlE;protein_id=WP_023232305.1;transl_table=11 NZ_MYDG01000014.1 RefSeq gene 101460 101589 . - . ID=gene-SO06_RS25830;Name=SO06_RS25830;end_range=101589,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25830;partial=true NZ_MYDG01000014.1 Protein Homology CDS 101460 101589 . - 1 ID=cds-WP_372906863.1;Parent=gene-SO06_RS25830;Dbxref=GenBank:WP_372906863.1;Name=WP_372906863.1;end_range=101589,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010295224.1;locus_tag=SO06_RS25830;partial=true;product=hypothetical protein;protein_id=WP_372906863.1;transl_table=11 ##sequence-region NZ_MYDG01000015.1 1 99575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000015.1 RefSeq region 1 99575 . + . ID=NZ_MYDG01000015.1:1..99575;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000015.1 RefSeq gene 133 1434 . + . ID=gene-SO06_RS17430;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=SO06_RS17430 NZ_MYDG01000015.1 Protein Homology CDS 133 1434 . + 0 ID=cds-WP_000637595.1;Parent=gene-SO06_RS17430;Dbxref=GenBank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=SO06_RS17430;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 1555 1902 . + . ID=gene-SO06_RS17435;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=SO06_RS17435 NZ_MYDG01000015.1 Protein Homology CDS 1555 1902 . + 0 ID=cds-WP_000887832.1;Parent=gene-SO06_RS17435;Dbxref=GenBank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=SO06_RS17435;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 1878 3581 . + . ID=gene-SO06_RS17440;Name=SO06_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17440 NZ_MYDG01000015.1 Protein Homology CDS 1878 3581 . + 0 ID=cds-WP_023231656.1;Parent=gene-SO06_RS17440;Dbxref=GenBank:WP_023231656.1;Name=WP_023231656.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=SO06_RS17440;product=protein-disulfide reductase DsbD;protein_id=WP_023231656.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 3618 4193 . + . ID=gene-SO06_RS17445;Name=SO06_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17445 NZ_MYDG01000015.1 Protein Homology CDS 3618 4193 . + 0 ID=cds-WP_001188509.1;Parent=gene-SO06_RS17445;Dbxref=GenBank:WP_001188509.1;Name=WP_001188509.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=SO06_RS17445;product=transcriptional regulator;protein_id=WP_001188509.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 4309 4384 . + . ID=gene-SO06_RS17450;Name=SO06_RS17450;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS17450 NZ_MYDG01000015.1 tRNAscan-SE tRNA 4309 4384 . + . ID=rna-SO06_RS17450;Parent=gene-SO06_RS17450;anticodon=(pos:4342..4344);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS17450;product=tRNA-Phe NZ_MYDG01000015.1 tRNAscan-SE exon 4309 4384 . + . ID=exon-SO06_RS17450-1;Parent=rna-SO06_RS17450;anticodon=(pos:4342..4344);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS17450;product=tRNA-Phe NZ_MYDG01000015.1 RefSeq gene 4567 5838 . + . ID=gene-SO06_RS17455;Name=SO06_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17455 NZ_MYDG01000015.1 Protein Homology CDS 4567 5838 . + 0 ID=cds-WP_023231657.1;Parent=gene-SO06_RS17455;Dbxref=GenBank:WP_023231657.1;Name=WP_023231657.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186752.1;locus_tag=SO06_RS17455;product=tyrosine-type recombinase/integrase;protein_id=WP_023231657.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 5951 7096 . - . ID=gene-SO06_RS17460;Name=SO06_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17460 NZ_MYDG01000015.1 Protein Homology CDS 5951 7096 . - 0 ID=cds-WP_023231658.1;Parent=gene-SO06_RS17460;Dbxref=GenBank:WP_023231658.1;Name=WP_023231658.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688840.1;locus_tag=SO06_RS17460;product=TIR domain-containing protein;protein_id=WP_023231658.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 7311 8783 . - . ID=gene-SO06_RS17465;Name=SO06_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17465 NZ_MYDG01000015.1 Protein Homology CDS 7311 8783 . - 0 ID=cds-WP_023231659.1;Parent=gene-SO06_RS17465;Dbxref=GenBank:WP_023231659.1;Name=WP_023231659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240324.1;locus_tag=SO06_RS17465;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WP_023231659.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 8780 9154 . - . ID=gene-SO06_RS17470;Name=SO06_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17470 NZ_MYDG01000015.1 Protein Homology CDS 8780 9154 . - 0 ID=cds-WP_023231660.1;Parent=gene-SO06_RS17470;Dbxref=GenBank:WP_023231660.1;Name=WP_023231660.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020231149.1;locus_tag=SO06_RS17470;product=plasmid mobilization protein;protein_id=WP_023231660.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 9158 9379 . - . ID=gene-SO06_RS17475;Name=SO06_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17475 NZ_MYDG01000015.1 Protein Homology CDS 9158 9379 . - 0 ID=cds-WP_023231661.1;Parent=gene-SO06_RS17475;Dbxref=GenBank:WP_023231661.1;Name=WP_023231661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016241874.1;locus_tag=SO06_RS17475;product=hypothetical protein;protein_id=WP_023231661.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 9587 9958 . - . ID=gene-SO06_RS17480;Name=SO06_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17480 NZ_MYDG01000015.1 Protein Homology CDS 9587 9958 . - 0 ID=cds-WP_023231662.1;Parent=gene-SO06_RS17480;Dbxref=GenBank:WP_023231662.1;Name=WP_023231662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000997175.1;locus_tag=SO06_RS17480;product=hypothetical protein;protein_id=WP_023231662.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 10444 10719 . - . ID=gene-SO06_RS17485;Name=SO06_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17485 NZ_MYDG01000015.1 Protein Homology CDS 10444 10719 . - 0 ID=cds-WP_023231663.1;Parent=gene-SO06_RS17485;Dbxref=GenBank:WP_023231663.1;Name=WP_023231663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151481.1;locus_tag=SO06_RS17485;product=hypothetical protein;protein_id=WP_023231663.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 10723 11010 . - . ID=gene-SO06_RS17490;Name=SO06_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17490 NZ_MYDG01000015.1 Protein Homology CDS 10723 11010 . - 0 ID=cds-WP_023231664.1;Parent=gene-SO06_RS17490;Dbxref=GenBank:WP_023231664.1;Name=WP_023231664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020231154.1;locus_tag=SO06_RS17490;product=hypothetical protein;protein_id=WP_023231664.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 11621 12466 . + . ID=gene-SO06_RS17495;Name=SO06_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17495 NZ_MYDG01000015.1 Protein Homology CDS 11621 12466 . + 0 ID=cds-WP_023231665.1;Parent=gene-SO06_RS17495;Dbxref=GenBank:WP_023231665.1;Name=WP_023231665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843928.1;locus_tag=SO06_RS17495;product=replication initiation protein;protein_id=WP_023231665.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 12463 12729 . + . ID=gene-SO06_RS17500;Name=SO06_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17500 NZ_MYDG01000015.1 Protein Homology CDS 12463 12729 . + 0 ID=cds-WP_023231666.1;Parent=gene-SO06_RS17500;Dbxref=GenBank:WP_023231666.1;Name=WP_023231666.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240319.1;locus_tag=SO06_RS17500;product=helix-turn-helix domain-containing protein;protein_id=WP_023231666.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 12755 12958 . - . ID=gene-SO06_RS17505;Name=SO06_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17505 NZ_MYDG01000015.1 Protein Homology CDS 12755 12958 . - 0 ID=cds-WP_023231667.1;Parent=gene-SO06_RS17505;Dbxref=GenBank:WP_023231667.1;Name=WP_023231667.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240318.1;locus_tag=SO06_RS17505;product=helix-turn-helix transcriptional regulator;protein_id=WP_023231667.1;transl_table=11 NZ_MYDG01000015.1 RefSeq pseudogene 13403 13480 . - . ID=gene-SO06_RS17510;Name=SO06_RS17510;end_range=13480,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS17510;partial=true;pseudo=true NZ_MYDG01000015.1 Protein Homology CDS 13403 13480 . - 0 ID=cds-SO06_RS17510;Parent=gene-SO06_RS17510;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=13480,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193311.1;locus_tag=SO06_RS17510;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 13571 13903 . - . ID=gene-SO06_RS17515;Name=SO06_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17515 NZ_MYDG01000015.1 Protein Homology CDS 13571 13903 . - 0 ID=cds-WP_001165472.1;Parent=gene-SO06_RS17515;Dbxref=GenBank:WP_001165472.1;Name=WP_001165472.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463185.1;locus_tag=SO06_RS17515;product=MerR family transcriptional regulator;protein_id=WP_001165472.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 13975 14352 . + . ID=gene-SO06_RS17520;Name=SO06_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17520 NZ_MYDG01000015.1 Protein Homology CDS 13975 14352 . + 0 ID=cds-WP_000916345.1;Parent=gene-SO06_RS17520;Dbxref=GenBank:WP_000916345.1;Name=WP_000916345.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916345.1;locus_tag=SO06_RS17520;product=EthD domain-containing protein;protein_id=WP_000916345.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 15562 16314 . + . ID=gene-SO06_RS17525;Name=SO06_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17525 NZ_MYDG01000015.1 Protein Homology CDS 15562 16314 . + 0 ID=cds-WP_000842411.1;Parent=gene-SO06_RS17525;Dbxref=GenBank:WP_000842411.1;Name=WP_000842411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=SO06_RS17525;product=non-specific acid phosphatase;protein_id=WP_000842411.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 16446 17294 . - . ID=gene-SO06_RS17530;Name=SO06_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17530 NZ_MYDG01000015.1 Protein Homology CDS 16446 17294 . - 0 ID=cds-WP_000175393.1;Parent=gene-SO06_RS17530;Dbxref=GenBank:WP_000175393.1;Name=WP_000175393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175395.1;locus_tag=SO06_RS17530;product=SdiA-regulated domain-containing protein;protein_id=WP_000175393.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 17320 17481 . - . ID=gene-SO06_RS25290;Name=SO06_RS25290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25290 NZ_MYDG01000015.1 GeneMarkS-2+ CDS 17320 17481 . - 0 ID=cds-WP_001816720.1;Parent=gene-SO06_RS25290;Dbxref=GenBank:WP_001816720.1;Name=WP_001816720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS25290;product=hypothetical protein;protein_id=WP_001816720.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 17743 17955 . - . ID=gene-SO06_RS17535;Name=SO06_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17535 NZ_MYDG01000015.1 Protein Homology CDS 17743 17955 . - 0 ID=cds-WP_000063793.1;Parent=gene-SO06_RS17535;Dbxref=GenBank:WP_000063793.1;Name=WP_000063793.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063792.1;locus_tag=SO06_RS17535;product=FaeA/PapI family transcriptional regulator;protein_id=WP_000063793.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 18028 18600 . - . ID=gene-SO06_RS17540;Name=SO06_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17540 NZ_MYDG01000015.1 Protein Homology CDS 18028 18600 . - 0 ID=cds-WP_000091128.1;Parent=gene-SO06_RS17540;Dbxref=GenBank:WP_000091128.1;Name=WP_000091128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091127.1;locus_tag=SO06_RS17540;product=hypothetical protein;protein_id=WP_000091128.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 18655 19314 . - . ID=gene-SO06_RS17545;Name=SO06_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17545 NZ_MYDG01000015.1 Protein Homology CDS 18655 19314 . - 0 ID=cds-WP_023231668.1;Parent=gene-SO06_RS17545;Dbxref=GenBank:WP_023231668.1;Name=WP_023231668.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663292.1;locus_tag=SO06_RS17545;product=DsbA family protein;protein_id=WP_023231668.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 19495 19962 . - . ID=gene-SO06_RS17550;Name=SO06_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17550 NZ_MYDG01000015.1 Protein Homology CDS 19495 19962 . - 0 ID=cds-WP_023231669.1;Parent=gene-SO06_RS17550;Dbxref=GenBank:WP_023231669.1;Name=WP_023231669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750458.1;locus_tag=SO06_RS17550;product=hypothetical protein;protein_id=WP_023231669.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 20662 21099 . - . ID=gene-SO06_RS17555;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=SO06_RS17555 NZ_MYDG01000015.1 Protein Homology CDS 20662 21099 . - 0 ID=cds-WP_000191852.1;Parent=gene-SO06_RS17555;Dbxref=GenBank:WP_000191852.1;Name=WP_000191852.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191852.1;locus_tag=SO06_RS17555;product=AfaD family invasin;protein_id=WP_000191852.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 21119 23707 . - . ID=gene-SO06_RS17560;Name=SO06_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17560 NZ_MYDG01000015.1 Protein Homology CDS 21119 23707 . - 0 ID=cds-WP_031619421.1;Parent=gene-SO06_RS17560;Dbxref=GenBank:WP_031619421.1;Name=WP_031619421.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669623.1;locus_tag=SO06_RS17560;product=fimbria/pilus outer membrane usher protein;protein_id=WP_031619421.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 23918 24748 . - . ID=gene-SO06_RS17565;Name=SO06_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17565 NZ_MYDG01000015.1 Protein Homology CDS 23918 24748 . - 0 ID=cds-WP_023231671.1;Parent=gene-SO06_RS17565;Dbxref=GenBank:WP_023231671.1;Name=WP_023231671.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673851.1;locus_tag=SO06_RS17565;product=fimbria/pilus periplasmic chaperone;protein_id=WP_023231671.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 24950 25255 . - . ID=gene-SO06_RS17570;Name=SO06_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17570 NZ_MYDG01000015.1 Protein Homology CDS 24950 25255 . - 0 ID=cds-WP_000370555.1;Parent=gene-SO06_RS17570;Dbxref=GenBank:WP_000370555.1;Name=WP_000370555.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370555.1;locus_tag=SO06_RS17570;product=PapB/FocB family fimbrial expression transcriptional regulator;protein_id=WP_000370555.1;transl_table=11 NZ_MYDG01000015.1 RefSeq pseudogene 25788 25931 . + . ID=gene-SO06_RS25295;Name=SO06_RS25295;end_range=25931,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25295;partial=true;pseudo=true NZ_MYDG01000015.1 Protein Homology CDS 25788 25931 . + 0 ID=cds-SO06_RS25295;Parent=gene-SO06_RS25295;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=25931,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611389.1;locus_tag=SO06_RS25295;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_MYDG01000015.1 RefSeq pseudogene 25948 26294 . + . ID=gene-SO06_RS17580;Name=SO06_RS17580;end_range=26294,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS17580;partial=true;pseudo=true;start_range=.,25948 NZ_MYDG01000015.1 Protein Homology CDS 25948 26294 . + 0 ID=cds-SO06_RS17580;Parent=gene-SO06_RS17580;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=26294,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=SO06_RS17580;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;start_range=.,25948;transl_table=11 NZ_MYDG01000015.1 RefSeq pseudogene 26575 26823 . - . ID=gene-SO06_RS17585;Name=SO06_RS17585;end_range=26823,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS17585;partial=true;pseudo=true;start_range=.,26575 NZ_MYDG01000015.1 Protein Homology CDS 26575 26823 . - 0 ID=cds-SO06_RS17585;Parent=gene-SO06_RS17585;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=26823,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011920327.1;locus_tag=SO06_RS17585;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,26575;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 27038 27529 . - . ID=gene-SO06_RS17590;Name=SO06_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17590 NZ_MYDG01000015.1 Protein Homology CDS 27038 27529 . - 0 ID=cds-WP_023231674.1;Parent=gene-SO06_RS17590;Dbxref=GenBank:WP_023231674.1;Name=WP_023231674.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=SO06_RS17590;product=GNAT family N-acetyltransferase;protein_id=WP_023231674.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 27526 27819 . - . ID=gene-SO06_RS17595;Name=SO06_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17595 NZ_MYDG01000015.1 Protein Homology CDS 27526 27819 . - 0 ID=cds-WP_023231675.1;Parent=gene-SO06_RS17595;Dbxref=GenBank:WP_023231675.1;Name=WP_023231675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=SO06_RS17595;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_023231675.1;transl_table=11 NZ_MYDG01000015.1 RefSeq pseudogene 28137 28359 . + . ID=gene-SO06_RS25590;Name=SO06_RS25590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25590;pseudo=true NZ_MYDG01000015.1 Protein Homology CDS 28137 28359 . + 0 ID=cds-SO06_RS25590;Parent=gene-SO06_RS25590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=SO06_RS25590;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 28625 29500 . + . ID=gene-SO06_RS17600;Name=SO06_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17600 NZ_MYDG01000015.1 Protein Homology CDS 28625 29500 . + 0 ID=cds-WP_023195838.1;Parent=gene-SO06_RS17600;Dbxref=GenBank:WP_023195838.1;Name=WP_023195838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=SO06_RS17600;product=AraC family transcriptional regulator;protein_id=WP_023195838.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 29497 29784 . + . ID=gene-SO06_RS17605;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=SO06_RS17605 NZ_MYDG01000015.1 Protein Homology CDS 29497 29784 . + 0 ID=cds-WP_001269916.1;Parent=gene-SO06_RS17605;Dbxref=GenBank:WP_001269916.1;Name=WP_001269916.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=SO06_RS17605;product=transcriptional regulator RtsB;protein_id=WP_001269916.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 29777 29959 . - . ID=gene-SO06_RS25595;Name=SO06_RS25595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25595 NZ_MYDG01000015.1 Protein Homology CDS 29777 29959 . - 0 ID=cds-WP_023231676.1;Parent=gene-SO06_RS25595;Dbxref=GenBank:WP_023231676.1;Name=WP_023231676.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=SO06_RS25595;product=ATP-binding cassette domain-containing protein;protein_id=WP_023231676.1;transl_table=11 NZ_MYDG01000015.1 RefSeq pseudogene 29979 30078 . + . ID=gene-SO06_RS25600;Name=SO06_RS25600;end_range=30078,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25600;partial=true;pseudo=true NZ_MYDG01000015.1 Protein Homology CDS 29979 30078 . + 0 ID=cds-SO06_RS25600;Parent=gene-SO06_RS25600;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=30078,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463178.1;locus_tag=SO06_RS25600;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000015.1 RefSeq pseudogene 30144 30320 . + . ID=gene-SO06_RS25605;Name=SO06_RS25605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25605;partial=true;pseudo=true;start_range=.,30144 NZ_MYDG01000015.1 Protein Homology CDS 30144 30320 . + 0 ID=cds-SO06_RS25605;Parent=gene-SO06_RS25605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=SO06_RS25605;partial=true;product=hypothetical protein;pseudo=true;start_range=.,30144;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 30615 31520 . - . ID=gene-SO06_RS17620;Name=SO06_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17620 NZ_MYDG01000015.1 Protein Homology CDS 30615 31520 . - 0 ID=cds-WP_023231677.1;Parent=gene-SO06_RS17620;Dbxref=GenBank:WP_023231677.1;Name=WP_023231677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=SO06_RS17620;product=SdiA-regulated domain-containing protein;protein_id=WP_023231677.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 31824 33224 . + . ID=gene-SO06_RS17625;Name=SO06_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17625 NZ_MYDG01000015.1 Protein Homology CDS 31824 33224 . + 0 ID=cds-WP_023231678.1;Parent=gene-SO06_RS17625;Dbxref=GenBank:WP_023231678.1;Name=WP_023231678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=SO06_RS17625;product=CBM96 family carbohydrate-binding protein;protein_id=WP_023231678.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 33308 33901 . - . ID=gene-SO06_RS17630;Name=SO06_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17630 NZ_MYDG01000015.1 Protein Homology CDS 33308 33901 . - 0 ID=cds-WP_001584224.1;Parent=gene-SO06_RS17630;Dbxref=GenBank:WP_001584224.1;Name=WP_001584224.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=SO06_RS17630;product=TorD/DmsD family molecular chaperone;protein_id=WP_001584224.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 33976 34749 . - . ID=gene-SO06_RS17635;Name=SO06_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17635 NZ_MYDG01000015.1 Protein Homology CDS 33976 34749 . - 0 ID=cds-WP_020839691.1;Parent=gene-SO06_RS17635;Dbxref=GenBank:WP_020839691.1;Name=WP_020839691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=SO06_RS17635;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_020839691.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 34742 35368 . - . ID=gene-SO06_RS17640;Name=SO06_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17640 NZ_MYDG01000015.1 Protein Homology CDS 34742 35368 . - 0 ID=cds-WP_023231679.1;Parent=gene-SO06_RS17640;Dbxref=GenBank:WP_023231679.1;Name=WP_023231679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=SO06_RS17640;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_023231679.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 35382 37811 . - . ID=gene-SO06_RS17645;Name=SO06_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17645 NZ_MYDG01000015.1 Protein Homology CDS 35382 37811 . - 0 ID=cds-WP_023231680.1;Parent=gene-SO06_RS17645;Dbxref=GenBank:WP_023231680.1;Name=WP_023231680.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=SO06_RS17645;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_023231680.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 38186 39817 . + . ID=gene-SO06_RS17650;Name=SO06_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17650 NZ_MYDG01000015.1 Protein Homology CDS 38186 39817 . + 0 ID=cds-WP_023137205.1;Parent=gene-SO06_RS17650;Dbxref=GenBank:WP_023137205.1;Name=WP_023137205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=SO06_RS17650;product=sensor histidine kinase;protein_id=WP_023137205.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 39814 40533 . + . ID=gene-SO06_RS17655;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=SO06_RS17655 NZ_MYDG01000015.1 Protein Homology CDS 39814 40533 . + 0 ID=cds-WP_080204272.1;Parent=gene-SO06_RS17655;Dbxref=GenBank:WP_080204272.1;Name=WP_080204272.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=SO06_RS17655;product=two-component system response regulator DcuR;protein_id=WP_080204272.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 40850 41116 . + . ID=gene-SO06_RS17660;Name=SO06_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17660 NZ_MYDG01000015.1 Protein Homology CDS 40850 41116 . + 0 ID=cds-WP_001530565.1;Parent=gene-SO06_RS17660;Dbxref=GenBank:WP_001530565.1;Name=WP_001530565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=SO06_RS17660;product=hypothetical protein;protein_id=WP_001530565.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 41263 42603 . + . ID=gene-SO06_RS17665;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=SO06_RS17665 NZ_MYDG01000015.1 Protein Homology CDS 41263 42603 . + 0 ID=cds-WP_000899149.1;Parent=gene-SO06_RS17665;Dbxref=GenBank:WP_000899149.1;Name=WP_000899149.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=SO06_RS17665;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899149.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 42699 44345 . + . ID=gene-SO06_RS17670;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=SO06_RS17670 NZ_MYDG01000015.1 Protein Homology CDS 42699 44345 . + 0 ID=cds-WP_000037196.1;Parent=gene-SO06_RS17670;Dbxref=GenBank:WP_000037196.1;Name=WP_000037196.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=SO06_RS17670;product=class I fumarate hydratase FumA;protein_id=WP_000037196.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 44443 45873 . - . ID=gene-SO06_RS17675;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=SO06_RS17675 NZ_MYDG01000015.1 Protein Homology CDS 44443 45873 . - 0 ID=cds-WP_000028070.1;Parent=gene-SO06_RS17675;Dbxref=GenBank:WP_000028070.1;Name=WP_000028070.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=SO06_RS17675;product=melibiose:sodium transporter MelB;protein_id=WP_000028070.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 45957 47312 . - . ID=gene-SO06_RS17680;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=SO06_RS17680 NZ_MYDG01000015.1 Protein Homology CDS 45957 47312 . - 0 ID=cds-WP_077248397.1;Parent=gene-SO06_RS17680;Dbxref=GenBank:WP_077248397.1;Name=WP_077248397.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=SO06_RS17680;product=alpha-galactosidase;protein_id=WP_077248397.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 47581 48513 . + . ID=gene-SO06_RS17685;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=SO06_RS17685 NZ_MYDG01000015.1 Protein Homology CDS 47581 48513 . + 0 ID=cds-WP_000106992.1;Parent=gene-SO06_RS17685;Dbxref=GenBank:WP_000106992.1;Name=WP_000106992.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=SO06_RS17685;product=transcriptional regulator MelR;protein_id=WP_000106992.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 48746 51013 . + . ID=gene-SO06_RS17690;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=SO06_RS17690 NZ_MYDG01000015.1 Protein Homology CDS 48746 51013 . + 0 ID=cds-WP_001538051.1;Parent=gene-SO06_RS17690;Dbxref=GenBank:WP_001538051.1;Name=WP_001538051.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=SO06_RS17690;product=arginine decarboxylase;protein_id=WP_001538051.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 51311 52072 . + . ID=gene-SO06_RS17695;Name=SO06_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17695 NZ_MYDG01000015.1 Protein Homology CDS 51311 52072 . + 0 ID=cds-WP_001217083.1;Parent=gene-SO06_RS17695;Dbxref=GenBank:WP_001217083.1;Name=WP_001217083.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=SO06_RS17695;product=AraC family transcriptional regulator;protein_id=WP_001217083.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 52212 53549 . + . ID=gene-SO06_RS17700;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=SO06_RS17700 NZ_MYDG01000015.1 Protein Homology CDS 52212 53549 . + 0 ID=cds-WP_000093130.1;Parent=gene-SO06_RS17700;Dbxref=GenBank:WP_000093130.1;Name=WP_000093130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=SO06_RS17700;product=arginine/agmatine antiporter;protein_id=WP_000093130.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 53683 55326 . + . ID=gene-SO06_RS17705;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=SO06_RS17705 NZ_MYDG01000015.1 Protein Homology CDS 53683 55326 . + 0 ID=cds-WP_001534544.1;Parent=gene-SO06_RS17705;Dbxref=GenBank:WP_001534544.1;Name=WP_001534544.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=SO06_RS17705;product=phosphoethanolamine transferase EptA;protein_id=WP_001534544.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 55323 55991 . + . ID=gene-SO06_RS17710;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=SO06_RS17710 NZ_MYDG01000015.1 Protein Homology CDS 55323 55991 . + 0 ID=cds-WP_000697899.1;Parent=gene-SO06_RS17710;Dbxref=GenBank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=SO06_RS17710;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 56001 57071 . + . ID=gene-SO06_RS17715;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=SO06_RS17715 NZ_MYDG01000015.1 Protein Homology CDS 56001 57071 . + 0 ID=cds-WP_001212189.1;Parent=gene-SO06_RS17715;Dbxref=GenBank:WP_001212189.1;Name=WP_001212189.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=SO06_RS17715;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001212189.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 57079 57168 . - . ID=gene-SO06_RS25115;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=SO06_RS25115 NZ_MYDG01000015.1 Protein Homology CDS 57079 57168 . - 0 ID=cds-WP_000844399.1;Parent=gene-SO06_RS25115;Dbxref=GenBank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=SO06_RS25115;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 57238 58740 . - . ID=gene-SO06_RS17720;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=SO06_RS17720 NZ_MYDG01000015.1 Protein Homology CDS 57238 58740 . - 0 ID=cds-WP_000919710.1;Parent=gene-SO06_RS17720;Dbxref=GenBank:WP_000919710.1;Name=WP_000919710.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=SO06_RS17720;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919710.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 59208 59543 . + . ID=gene-SO06_RS17725;Name=SO06_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17725 NZ_MYDG01000015.1 Protein Homology CDS 59208 59543 . + 0 ID=cds-WP_000056482.1;Parent=gene-SO06_RS17725;Dbxref=GenBank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=SO06_RS17725;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056482.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 59663 60106 . + . ID=gene-SO06_RS17730;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=SO06_RS17730 NZ_MYDG01000015.1 Protein Homology CDS 59663 60106 . + 0 ID=cds-WP_023231869.1;Parent=gene-SO06_RS17730;Dbxref=GenBank:WP_023231869.1;Name=WP_023231869.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=SO06_RS17730;product=VOC family metalloprotein YjdN;protein_id=WP_023231869.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 60258 60692 . + . ID=gene-SO06_RS17735;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=SO06_RS17735 NZ_MYDG01000015.1 Protein Homology CDS 60258 60692 . + 0 ID=cds-WP_001549776.1;Parent=gene-SO06_RS17735;Dbxref=GenBank:WP_001549776.1;Name=WP_001549776.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=SO06_RS17735;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001549776.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 60950 61858 . + . ID=gene-SO06_RS17740;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=SO06_RS17740 NZ_MYDG01000015.1 Protein Homology CDS 60950 61858 . + 0 ID=cds-WP_000457033.1;Parent=gene-SO06_RS17740;Dbxref=GenBank:WP_000457033.1;Name=WP_000457033.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=SO06_RS17740;product=lipid A hydroxylase LpxO;protein_id=WP_000457033.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 62213 64360 . + . ID=gene-SO06_RS17745;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=SO06_RS17745 NZ_MYDG01000015.1 Protein Homology CDS 62213 64360 . + 0 ID=cds-WP_077248396.1;Parent=gene-SO06_RS17745;Dbxref=GenBank:WP_077248396.1;Name=WP_077248396.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=SO06_RS17745;product=formate dehydrogenase subunit alpha;protein_id=WP_077248396.1;transl_except=(pos:62630..62632%2Caa:Sec);transl_table=11 NZ_MYDG01000015.1 RefSeq gene 64537 65226 . + . ID=gene-SO06_RS17750;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=SO06_RS17750 NZ_MYDG01000015.1 Protein Homology CDS 64537 65226 . + 0 ID=cds-WP_000771448.1;Parent=gene-SO06_RS17750;Dbxref=GenBank:WP_000771448.1;Name=WP_000771448.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=SO06_RS17750;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000771448.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 65384 66694 . - . ID=gene-SO06_RS17755;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=SO06_RS17755 NZ_MYDG01000015.1 Protein Homology CDS 65384 66694 . - 0 ID=cds-WP_000793278.1;Parent=gene-SO06_RS17755;Dbxref=GenBank:WP_000793278.1;Name=WP_000793278.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=SO06_RS17755;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000793278.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 67039 67659 . - . ID=gene-SO06_RS17760;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=SO06_RS17760 NZ_MYDG01000015.1 Protein Homology CDS 67039 67659 . - 0 ID=cds-WP_000083232.1;Parent=gene-SO06_RS17760;Dbxref=GenBank:WP_000083232.1;Name=WP_000083232.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=SO06_RS17760;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000083232.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 67656 69878 . - . ID=gene-SO06_RS17765;Name=nrfEF;gbkey=Gene;gene=nrfEF;gene_biotype=protein_coding;locus_tag=SO06_RS17765 NZ_MYDG01000015.1 Protein Homology CDS 67656 69878 . - 0 ID=cds-WP_023231871.1;Parent=gene-SO06_RS17765;Dbxref=GenBank:WP_023231871.1;Name=WP_023231871.1;gbkey=CDS;gene=nrfEF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=SO06_RS17765;product=heme lyase NrfEFG subunit NrfEF;protein_id=WP_023231871.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 69871 70827 . - . ID=gene-SO06_RS17770;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=SO06_RS17770 NZ_MYDG01000015.1 Protein Homology CDS 69871 70827 . - 0 ID=cds-WP_023231872.1;Parent=gene-SO06_RS17770;Dbxref=GenBank:WP_023231872.1;Name=WP_023231872.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=SO06_RS17770;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_023231872.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 70824 71495 . - . ID=gene-SO06_RS17775;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=SO06_RS17775 NZ_MYDG01000015.1 Protein Homology CDS 70824 71495 . - 0 ID=cds-WP_023231873.1;Parent=gene-SO06_RS17775;Dbxref=GenBank:WP_023231873.1;Name=WP_023231873.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=SO06_RS17775;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_023231873.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 71492 72058 . - . ID=gene-SO06_RS17780;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=SO06_RS17780 NZ_MYDG01000015.1 Protein Homology CDS 71492 72058 . - 0 ID=cds-WP_023231874.1;Parent=gene-SO06_RS17780;Dbxref=GenBank:WP_023231874.1;Name=WP_023231874.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=SO06_RS17780;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_023231874.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 72170 73606 . - . ID=gene-SO06_RS17785;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=SO06_RS17785 NZ_MYDG01000015.1 Protein Homology CDS 72170 73606 . - 0 ID=cds-WP_000101771.1;Parent=gene-SO06_RS17785;Dbxref=GenBank:WP_000101771.1;Name=WP_000101771.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=SO06_RS17785;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000101771.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 74038 75996 . + . ID=gene-SO06_RS17795;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=SO06_RS17795 NZ_MYDG01000015.1 Protein Homology CDS 74038 75996 . + 0 ID=cds-WP_000083877.1;Parent=gene-SO06_RS17795;Dbxref=GenBank:WP_000083877.1;Name=WP_000083877.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=SO06_RS17795;product=acetate--CoA ligase;protein_id=WP_000083877.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 76242 76556 . + . ID=gene-SO06_RS17800;Name=SO06_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17800 NZ_MYDG01000015.1 Protein Homology CDS 76242 76556 . + 0 ID=cds-WP_000999620.1;Parent=gene-SO06_RS17800;Dbxref=GenBank:WP_000999620.1;Name=WP_000999620.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=SO06_RS17800;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 76553 78202 . + . ID=gene-SO06_RS17805;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=SO06_RS17805 NZ_MYDG01000015.1 Protein Homology CDS 76553 78202 . + 0 ID=cds-WP_000832536.1;Parent=gene-SO06_RS17805;Dbxref=GenBank:WP_000832536.1;Name=WP_000832536.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=SO06_RS17805;product=cation/acetate symporter ActP;protein_id=WP_000832536.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 78241 78930 . - . ID=gene-SO06_RS17810;Name=SO06_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17810 NZ_MYDG01000015.1 Protein Homology CDS 78241 78930 . - 0 ID=cds-WP_001067096.1;Parent=gene-SO06_RS17810;Dbxref=GenBank:WP_001067096.1;Name=WP_001067096.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=SO06_RS17810;product=LrgB family protein;protein_id=WP_001067096.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 78923 79333 . - . ID=gene-SO06_RS17815;Name=SO06_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17815 NZ_MYDG01000015.1 Protein Homology CDS 78923 79333 . - 0 ID=cds-WP_000257347.1;Parent=gene-SO06_RS17815;Dbxref=GenBank:WP_000257347.1;Name=WP_000257347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=SO06_RS17815;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 79437 80324 . + . ID=gene-SO06_RS17820;Name=SO06_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17820 NZ_MYDG01000015.1 Protein Homology CDS 79437 80324 . + 0 ID=cds-WP_000354962.1;Parent=gene-SO06_RS17820;Dbxref=GenBank:WP_000354962.1;Name=WP_000354962.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=SO06_RS17820;product=LysR family transcriptional regulator;protein_id=WP_000354962.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 80419 82065 . - . ID=gene-SO06_RS17825;Name=SO06_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17825 NZ_MYDG01000015.1 Protein Homology CDS 80419 82065 . - 0 ID=cds-WP_001536604.1;Parent=gene-SO06_RS17825;Dbxref=GenBank:WP_001536604.1;Name=WP_001536604.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=SO06_RS17825;product=Na+/H+ antiporter;protein_id=WP_001536604.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 82215 83564 . - . ID=gene-SO06_RS17835;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=SO06_RS17835 NZ_MYDG01000015.1 Protein Homology CDS 82215 83564 . - 0 ID=cds-WP_000106907.1;Parent=gene-SO06_RS17835;Dbxref=GenBank:WP_000106907.1;Name=WP_000106907.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=SO06_RS17835;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106907.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 83912 84580 . - . ID=gene-SO06_RS17840;Name=SO06_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17840 NZ_MYDG01000015.1 Protein Homology CDS 83912 84580 . - 0 ID=cds-WP_001651253.1;Parent=gene-SO06_RS17840;Dbxref=GenBank:WP_001651253.1;Name=WP_001651253.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=SO06_RS17840;product=glutathione S-transferase family protein;protein_id=WP_001651253.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 84873 85331 . - . ID=gene-SO06_RS17845;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=SO06_RS17845 NZ_MYDG01000015.1 Protein Homology CDS 84873 85331 . - 0 ID=cds-WP_000412686.1;Parent=gene-SO06_RS17845;Dbxref=GenBank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=SO06_RS17845;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 85418 85741 . + . ID=gene-SO06_RS17850;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=SO06_RS17850 NZ_MYDG01000015.1 Protein Homology CDS 85418 85741 . + 0 ID=cds-WP_000019483.1;Parent=gene-SO06_RS17850;Dbxref=GenBank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=SO06_RS17850;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 85729 87330 . - . ID=gene-SO06_RS17855;Name=SO06_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17855 NZ_MYDG01000015.1 Protein Homology CDS 85729 87330 . - 0 ID=cds-WP_023231875.1;Parent=gene-SO06_RS17855;Dbxref=GenBank:WP_023231875.1;Name=WP_023231875.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=SO06_RS17855;product=EAL domain-containing protein;protein_id=WP_023231875.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 87893 88174 . + . ID=gene-SO06_RS17860;Name=SO06_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17860 NZ_MYDG01000015.1 Protein Homology CDS 87893 88174 . + 0 ID=cds-WP_000719058.1;Parent=gene-SO06_RS17860;Dbxref=GenBank:WP_000719058.1;Name=WP_000719058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=SO06_RS17860;product=YjcB family protein;protein_id=WP_000719058.1;transl_table=11 NZ_MYDG01000015.1 RefSeq gene 88452 90518 . - . ID=gene-SO06_RS17865;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=SO06_RS17865 NZ_MYDG01000015.1 Protein Homology CDS 88452 90518 . - 0 ID=cds-WP_000358571.1;Parent=gene-SO06_RS17865;Dbxref=GenBank:WP_000358571.1;Name=WP_000358571.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=SO06_RS17865;product=SPI-4 type I secretion system protein SiiF;protein_id=WP_000358571.1;transl_table=11 NZ_MYDG01000015.1 RefSeq pseudogene 90558 99575 . - . ID=gene-SO06_RS17870;Name=siiE;end_range=99575,.;gbkey=Gene;gene=siiE;gene_biotype=pseudogene;locus_tag=SO06_RS17870;partial=true;pseudo=true NZ_MYDG01000015.1 Protein Homology CDS 90558 99575 . - 0 ID=cds-SO06_RS17870;Parent=gene-SO06_RS17870;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=99575,.;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=SO06_RS17870;partial=true;product=non-fimbrial adhesin SiiE;pseudo=true;transl_table=11 ##sequence-region NZ_MYDG01000016.1 1 93477 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000016.1 RefSeq region 1 93477 . + . ID=NZ_MYDG01000016.1:1..93477;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000016.1 RefSeq gene 63 719 . - . ID=gene-SO06_RS17875;Name=SO06_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17875 NZ_MYDG01000016.1 Protein Homology CDS 63 719 . - 0 ID=cds-WP_048348960.1;Parent=gene-SO06_RS17875;Dbxref=GenBank:WP_048348960.1;Name=WP_048348960.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=SO06_RS17875;product=ABC transporter ATP-binding protein;protein_id=WP_048348960.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 713 1390 . - . ID=gene-SO06_RS17880;Name=SO06_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17880 NZ_MYDG01000016.1 Protein Homology CDS 713 1390 . - 0 ID=cds-WP_001517914.1;Parent=gene-SO06_RS17880;Dbxref=GenBank:WP_001517914.1;Name=WP_001517914.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=SO06_RS17880;product=ABC transporter ATP-binding protein;protein_id=WP_001517914.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 1378 2085 . - . ID=gene-SO06_RS17885;Name=SO06_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17885 NZ_MYDG01000016.1 Protein Homology CDS 1378 2085 . - 0 ID=cds-WP_000553271.1;Parent=gene-SO06_RS17885;Dbxref=GenBank:WP_000553271.1;Name=WP_000553271.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=SO06_RS17885;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_000553271.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 2086 2664 . - . ID=gene-SO06_RS17890;Name=SO06_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17890 NZ_MYDG01000016.1 Protein Homology CDS 2086 2664 . - 0 ID=cds-WP_000124001.1;Parent=gene-SO06_RS17890;Dbxref=GenBank:WP_000124001.1;Name=WP_000124001.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=SO06_RS17890;product=ECF transporter S component;protein_id=WP_000124001.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 2690 3115 . - . ID=gene-SO06_RS17895;Name=SO06_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17895 NZ_MYDG01000016.1 Protein Homology CDS 2690 3115 . - 0 ID=cds-WP_000218568.1;Parent=gene-SO06_RS17895;Dbxref=GenBank:WP_000218568.1;Name=WP_000218568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=SO06_RS17895;product=PPC domain-containing DNA-binding protein;protein_id=WP_000218568.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 3489 4535 . + . ID=gene-SO06_RS17905;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=SO06_RS17905 NZ_MYDG01000016.1 Protein Homology CDS 3489 4535 . + 0 ID=cds-WP_023216277.1;Parent=gene-SO06_RS17905;Dbxref=GenBank:WP_023216277.1;Name=WP_023216277.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=SO06_RS17905;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_023216277.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 4557 5720 . + . ID=gene-SO06_RS17910;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=SO06_RS17910 NZ_MYDG01000016.1 Protein Homology CDS 4557 5720 . + 0 ID=cds-WP_000111274.1;Parent=gene-SO06_RS17910;Dbxref=GenBank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=SO06_RS17910;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 5822 6901 . + . ID=gene-SO06_RS17915;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=SO06_RS17915 NZ_MYDG01000016.1 Protein Homology CDS 5822 6901 . + 0 ID=cds-WP_000034386.1;Parent=gene-SO06_RS17915;Dbxref=GenBank:WP_000034386.1;Name=WP_000034386.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=SO06_RS17915;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034386.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 7128 7988 . + . ID=gene-SO06_RS17920;Name=SO06_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17920 NZ_MYDG01000016.1 Protein Homology CDS 7128 7988 . + 0 ID=cds-WP_000389833.1;Parent=gene-SO06_RS17920;Dbxref=GenBank:WP_000389833.1;Name=WP_000389833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=SO06_RS17920;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389833.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 8176 8811 . + . ID=gene-SO06_RS17925;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=SO06_RS17925 NZ_MYDG01000016.1 Protein Homology CDS 8176 8811 . + 0 ID=cds-WP_000626863.1;Parent=gene-SO06_RS17925;Dbxref=GenBank:WP_000626863.1;Name=WP_000626863.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=SO06_RS17925;product=arginine exporter ArgO;protein_id=WP_000626863.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 8905 9651 . + . ID=gene-SO06_RS17930;Name=SO06_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17930 NZ_MYDG01000016.1 Protein Homology CDS 8905 9651 . + 0 ID=cds-WP_000669854.1;Parent=gene-SO06_RS17930;Dbxref=GenBank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=SO06_RS17930;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 9917 10810 . - . ID=gene-SO06_RS17940;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=SO06_RS17940 NZ_MYDG01000016.1 Protein Homology CDS 9917 10810 . - 0 ID=cds-WP_000828345.1;Parent=gene-SO06_RS17940;Dbxref=GenBank:WP_000828345.1;Name=WP_000828345.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=SO06_RS17940;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828345.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 10964 11623 . + . ID=gene-SO06_RS17945;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=SO06_RS17945 NZ_MYDG01000016.1 Protein Homology CDS 10964 11623 . + 0 ID=cds-WP_000189741.1;Parent=gene-SO06_RS17945;Dbxref=GenBank:WP_000189741.1;Name=WP_000189741.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=SO06_RS17945;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 11890 13122 . + . ID=gene-SO06_RS17950;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=SO06_RS17950 NZ_MYDG01000016.1 Protein Homology CDS 11890 13122 . + 0 ID=cds-WP_001151627.1;Parent=gene-SO06_RS17950;Dbxref=GenBank:WP_001151627.1;Name=WP_001151627.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=SO06_RS17950;product=phosphoglycerate dehydrogenase;protein_id=WP_001151627.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 13504 14100 . - . ID=gene-SO06_RS17955;Name=SO06_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17955 NZ_MYDG01000016.1 Protein Homology CDS 13504 14100 . - 0 ID=cds-WP_031619524.1;Parent=gene-SO06_RS17955;Dbxref=GenBank:WP_031619524.1;Name=WP_031619524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=SO06_RS17955;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_031619524.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 14121 14304 . - . ID=gene-SO06_RS17960;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=SO06_RS17960 NZ_MYDG01000016.1 cmsearch ncRNA 14121 14304 . - . ID=rna-SO06_RS17960;Parent=gene-SO06_RS17960;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS17960;product=6S RNA NZ_MYDG01000016.1 cmsearch exon 14121 14304 . - . ID=exon-SO06_RS17960-1;Parent=rna-SO06_RS17960;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS17960;product=6S RNA NZ_MYDG01000016.1 RefSeq gene 14346 14675 . - . ID=gene-SO06_RS17965;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=SO06_RS17965 NZ_MYDG01000016.1 Protein Homology CDS 14346 14675 . - 0 ID=cds-WP_001276011.1;Parent=gene-SO06_RS17965;Dbxref=GenBank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=SO06_RS17965;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 14842 15420 . + . ID=gene-SO06_RS17975;Name=SO06_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS17975 NZ_MYDG01000016.1 Protein Homology CDS 14842 15420 . + 0 ID=cds-WP_000027236.1;Parent=gene-SO06_RS17975;Dbxref=GenBank:WP_000027236.1;Name=WP_000027236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=SO06_RS17975;product=YecA/YgfB family protein;protein_id=WP_000027236.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 15446 16762 . + . ID=gene-SO06_RS17980;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=SO06_RS17980 NZ_MYDG01000016.1 Protein Homology CDS 15446 16762 . + 0 ID=cds-WP_023232667.1;Parent=gene-SO06_RS17980;Dbxref=GenBank:WP_023232667.1;Name=WP_023232667.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=SO06_RS17980;product=Xaa-Pro aminopeptidase;protein_id=WP_023232667.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 16759 17937 . + . ID=gene-SO06_RS17985;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=SO06_RS17985 NZ_MYDG01000016.1 Protein Homology CDS 16759 17937 . + 0 ID=cds-WP_023232668.1;Parent=gene-SO06_RS17985;Dbxref=GenBank:WP_023232668.1;Name=WP_023232668.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=SO06_RS17985;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_023232668.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 18063 19265 . + . ID=gene-SO06_RS17990;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=SO06_RS17990 NZ_MYDG01000016.1 Protein Homology CDS 18063 19265 . + 0 ID=cds-WP_001192149.1;Parent=gene-SO06_RS17990;Dbxref=GenBank:WP_001192149.1;Name=WP_001192149.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=SO06_RS17990;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192149.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 19720 20814 . + . ID=gene-SO06_RS17995;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=SO06_RS17995 NZ_MYDG01000016.1 Protein Homology CDS 19720 20814 . + 0 ID=cds-WP_000068738.1;Parent=gene-SO06_RS17995;Dbxref=GenBank:WP_000068738.1;Name=WP_000068738.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=SO06_RS17995;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068738.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 20840 21229 . + . ID=gene-SO06_RS18000;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=SO06_RS18000 NZ_MYDG01000016.1 Protein Homology CDS 20840 21229 . + 0 ID=cds-WP_001295377.1;Parent=gene-SO06_RS18000;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=SO06_RS18000;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 21392 24265 . + . ID=gene-SO06_RS18005;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=SO06_RS18005 NZ_MYDG01000016.1 Protein Homology CDS 21392 24265 . + 0 ID=cds-WP_023232669.1;Parent=gene-SO06_RS18005;Dbxref=GenBank:WP_023232669.1;Name=WP_023232669.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=SO06_RS18005;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_023232669.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 24721 25614 . + . ID=gene-SO06_RS18015;Name=SO06_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18015 NZ_MYDG01000016.1 Protein Homology CDS 24721 25614 . + 0 ID=cds-WP_000819375.1;Parent=gene-SO06_RS18015;Dbxref=GenBank:WP_000819375.1;Name=WP_000819375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=SO06_RS18015;product=transporter;protein_id=WP_000819375.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 25662 27095 . - . ID=gene-SO06_RS18020;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=SO06_RS18020 NZ_MYDG01000016.1 Protein Homology CDS 25662 27095 . - 0 ID=cds-WP_023232670.1;Parent=gene-SO06_RS18020;Dbxref=GenBank:WP_023232670.1;Name=WP_023232670.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=SO06_RS18020;product=6-phospho-beta-glucosidase BglA;protein_id=WP_023232670.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 27253 27564 . + . ID=gene-SO06_RS18025;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=SO06_RS18025 NZ_MYDG01000016.1 Protein Homology CDS 27253 27564 . + 0 ID=cds-WP_001182976.1;Parent=gene-SO06_RS18025;Dbxref=GenBank:WP_001182976.1;Name=WP_001182976.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=SO06_RS18025;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182976.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 27728 28387 . + . ID=gene-SO06_RS18030;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=SO06_RS18030 NZ_MYDG01000016.1 Protein Homology CDS 27728 28387 . + 0 ID=cds-WP_000250289.1;Parent=gene-SO06_RS18030;Dbxref=GenBank:WP_000250289.1;Name=WP_000250289.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=SO06_RS18030;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250289.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 28503 29483 . - . ID=gene-SO06_RS18040;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=SO06_RS18040 NZ_MYDG01000016.1 Protein Homology CDS 28503 29483 . - 0 ID=cds-WP_023232672.1;Parent=gene-SO06_RS18040;Dbxref=GenBank:WP_023232672.1;Name=WP_023232672.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=SO06_RS18040;product=tRNA-modifying protein YgfZ;protein_id=WP_023232672.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 29733 29999 . + . ID=gene-SO06_RS18050;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=SO06_RS18050 NZ_MYDG01000016.1 Protein Homology CDS 29733 29999 . + 0 ID=cds-WP_000351186.1;Parent=gene-SO06_RS18050;Dbxref=GenBank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=SO06_RS18050;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 29980 30393 . + . ID=gene-SO06_RS18055;Name=SO06_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18055 NZ_MYDG01000016.1 Protein Homology CDS 29980 30393 . + 0 ID=cds-WP_000244756.1;Parent=gene-SO06_RS18055;Dbxref=GenBank:WP_000244756.1;Name=WP_000244756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=SO06_RS18055;product=protein YgfX;protein_id=WP_000244756.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 30446 30967 . - . ID=gene-SO06_RS18060;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=SO06_RS18060 NZ_MYDG01000016.1 Protein Homology CDS 30446 30967 . - 0 ID=cds-WP_001055885.1;Parent=gene-SO06_RS18060;Dbxref=GenBank:WP_001055885.1;Name=WP_001055885.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=SO06_RS18060;product=flavodoxin FldB;protein_id=WP_001055885.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 31080 31976 . + . ID=gene-SO06_RS18065;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=SO06_RS18065 NZ_MYDG01000016.1 Protein Homology CDS 31080 31976 . + 0 ID=cds-WP_000434302.1;Parent=gene-SO06_RS18065;Dbxref=GenBank:WP_000434302.1;Name=WP_000434302.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=SO06_RS18065;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434302.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 32000 32713 . + . ID=gene-SO06_RS18070;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=SO06_RS18070 NZ_MYDG01000016.1 Protein Homology CDS 32000 32713 . + 0 ID=cds-WP_000745614.1;Parent=gene-SO06_RS18070;Dbxref=GenBank:WP_000745614.1;Name=WP_000745614.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=SO06_RS18070;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745614.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 32719 34452 . + . ID=gene-SO06_RS18075;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=SO06_RS18075 NZ_MYDG01000016.1 Protein Homology CDS 32719 34452 . + 0 ID=cds-WP_023181521.1;Parent=gene-SO06_RS18075;Dbxref=GenBank:WP_023181521.1;Name=WP_023181521.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=SO06_RS18075;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_023181521.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 34557 35655 . + . ID=gene-SO06_RS18080;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=SO06_RS18080 NZ_MYDG01000016.1 Protein Homology CDS 34557 34631 . + 0 ID=cds-WP_010989230.1;Parent=gene-SO06_RS18080;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=SO06_RS18080;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_MYDG01000016.1 Protein Homology CDS 34633 35655 . + 0 ID=cds-WP_010989230.1;Parent=gene-SO06_RS18080;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=SO06_RS18080;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 35665 37182 . + . ID=gene-SO06_RS18085;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=SO06_RS18085 NZ_MYDG01000016.1 Protein Homology CDS 35665 37182 . + 0 ID=cds-WP_000003339.1;Parent=gene-SO06_RS18085;Dbxref=GenBank:WP_000003339.1;Name=WP_000003339.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=SO06_RS18085;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 37258 37803 . - . ID=gene-SO06_RS18090;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=SO06_RS18090 NZ_MYDG01000016.1 Protein Homology CDS 37258 37803 . - 0 ID=cds-WP_023232673.1;Parent=gene-SO06_RS18090;Dbxref=GenBank:WP_023232673.1;Name=WP_023232673.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=SO06_RS18090;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_023232673.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 38068 38826 . + . ID=gene-SO06_RS18100;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=SO06_RS18100 NZ_MYDG01000016.1 Protein Homology CDS 38068 38826 . + 0 ID=cds-WP_000244329.1;Parent=gene-SO06_RS18100;Dbxref=GenBank:WP_000244329.1;Name=WP_000244329.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=SO06_RS18100;product=amidase activator ActS;protein_id=WP_000244329.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 38905 38978 . + . ID=gene-SO06_RS18105;Name=SO06_RS18105;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS18105 NZ_MYDG01000016.1 tRNAscan-SE tRNA 38905 38978 . + . ID=rna-SO06_RS18105;Parent=gene-SO06_RS18105;anticodon=(pos:38937..38939);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS18105;product=tRNA-Gly NZ_MYDG01000016.1 tRNAscan-SE exon 38905 38978 . + . ID=exon-SO06_RS18105-1;Parent=rna-SO06_RS18105;anticodon=(pos:38937..38939);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS18105;product=tRNA-Gly NZ_MYDG01000016.1 RefSeq gene 39110 39916 . - . ID=gene-SO06_RS18110;Name=SO06_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18110 NZ_MYDG01000016.1 Protein Homology CDS 39110 39916 . - 0 ID=cds-WP_077248415.1;Parent=gene-SO06_RS18110;Dbxref=GenBank:WP_077248415.1;Name=WP_077248415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=SO06_RS18110;product=DUF1460 domain-containing protein;protein_id=WP_077248415.1;transl_table=11 NZ_MYDG01000016.1 RefSeq pseudogene 40107 40277 . + . ID=gene-SO06_RS18115;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=pseudogene;locus_tag=SO06_RS18115;partial=true;pseudo=true;start_range=.,40107 NZ_MYDG01000016.1 Protein Homology CDS 40107 40277 . + 0 ID=cds-SO06_RS18115;Parent=gene-SO06_RS18115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461950.1;locus_tag=SO06_RS18115;partial=true;product=tRNA(fMet)-specific endonuclease VapC;pseudo=true;start_range=.,40107;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 41082 41618 . + . ID=gene-SO06_RS18135;Name=SO06_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18135 NZ_MYDG01000016.1 Protein Homology CDS 41082 41618 . + 0 ID=cds-WP_001038500.1;Parent=gene-SO06_RS18135;Dbxref=GenBank:WP_001038500.1;Name=WP_001038500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=SO06_RS18135;product=STM3031 family outer membrane protein;protein_id=WP_001038500.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 41665 42297 . + . ID=gene-SO06_RS18140;Name=SO06_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18140 NZ_MYDG01000016.1 Protein Homology CDS 41665 42297 . + 0 ID=cds-WP_023232674.1;Parent=gene-SO06_RS18140;Dbxref=GenBank:WP_023232674.1;Name=WP_023232674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=SO06_RS18140;product=YfdX family protein;protein_id=WP_023232674.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 43016 43600 . + . ID=gene-SO06_RS18145;Name=SO06_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18145 NZ_MYDG01000016.1 Protein Homology CDS 43016 43600 . + 0 ID=cds-WP_023232675.1;Parent=gene-SO06_RS18145;Dbxref=GenBank:WP_023232675.1;Name=WP_023232675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738513.1;locus_tag=SO06_RS18145;product=fimbrial protein;protein_id=WP_023232675.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 43720 46209 . + . ID=gene-SO06_RS18150;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=SO06_RS18150 NZ_MYDG01000016.1 Protein Homology CDS 43720 46209 . + 0 ID=cds-WP_023232676.1;Parent=gene-SO06_RS18150;Dbxref=GenBank:WP_023232676.1;Name=WP_023232676.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=SO06_RS18150;product=fimbrial outer membrane usher protein StdB;protein_id=WP_023232676.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 46250 46993 . + . ID=gene-SO06_RS18155;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=SO06_RS18155 NZ_MYDG01000016.1 Protein Homology CDS 46250 46993 . + 0 ID=cds-WP_023232677.1;Parent=gene-SO06_RS18155;Dbxref=GenBank:WP_023232677.1;Name=WP_023232677.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=SO06_RS18155;product=fimbrial biogenesis chaperone StdC;protein_id=WP_023232677.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 46990 48072 . + . ID=gene-SO06_RS18160;Name=SO06_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18160 NZ_MYDG01000016.1 Protein Homology CDS 46990 48072 . + 0 ID=cds-WP_023232678.1;Parent=gene-SO06_RS18160;Dbxref=GenBank:WP_023232678.1;Name=WP_023232678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=SO06_RS18160;product=hypothetical protein;protein_id=WP_023232678.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 48181 48687 . + . ID=gene-SO06_RS18165;Name=SO06_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18165 NZ_MYDG01000016.1 Protein Homology CDS 48181 48687 . + 0 ID=cds-WP_023232679.1;Parent=gene-SO06_RS18165;Dbxref=GenBank:WP_023232679.1;Name=WP_023232679.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=SO06_RS18165;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_023232679.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 48674 49432 . + . ID=gene-SO06_RS18170;Name=SO06_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18170 NZ_MYDG01000016.1 Protein Homology CDS 48674 49432 . + 0 ID=cds-WP_023232680.1;Parent=gene-SO06_RS18170;Dbxref=GenBank:WP_023232680.1;Name=WP_023232680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=SO06_RS18170;product=hypothetical protein;protein_id=WP_023232680.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 49637 50479 . - . ID=gene-SO06_RS18175;Name=SO06_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18175 NZ_MYDG01000016.1 Protein Homology CDS 49637 50479 . - 0 ID=cds-WP_052895180.1;Parent=gene-SO06_RS18175;Dbxref=GenBank:WP_052895180.1;Name=WP_052895180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=SO06_RS18175;product=nickel/cobalt efflux protein RcnA;protein_id=WP_052895180.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 50602 50874 . + . ID=gene-SO06_RS18180;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=SO06_RS18180 NZ_MYDG01000016.1 Protein Homology CDS 50602 50874 . + 0 ID=cds-WP_000019953.1;Parent=gene-SO06_RS18180;Dbxref=GenBank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=SO06_RS18180;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 50905 52134 . - . ID=gene-SO06_RS18185;Name=SO06_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18185 NZ_MYDG01000016.1 Protein Homology CDS 50905 52134 . - 0 ID=cds-WP_023232682.1;Parent=gene-SO06_RS18185;Dbxref=GenBank:WP_023232682.1;Name=WP_023232682.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=SO06_RS18185;product=amino acid permease;protein_id=WP_023232682.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 52276 52731 . - . ID=gene-SO06_RS18190;Name=SO06_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18190 NZ_MYDG01000016.1 Protein Homology CDS 52276 52731 . - 0 ID=cds-WP_001519547.1;Parent=gene-SO06_RS18190;Dbxref=GenBank:WP_001519547.1;Name=WP_001519547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=SO06_RS18190;product=multidrug/biocide efflux PACE transporter;protein_id=WP_001519547.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 52835 53698 . + . ID=gene-SO06_RS18195;Name=SO06_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18195 NZ_MYDG01000016.1 Protein Homology CDS 52835 53698 . + 0 ID=cds-WP_020839089.1;Parent=gene-SO06_RS18195;Dbxref=GenBank:WP_020839089.1;Name=WP_020839089.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=SO06_RS18195;product=LysR family transcriptional regulator;protein_id=WP_020839089.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 53821 54999 . + . ID=gene-SO06_RS18200;Name=SO06_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18200 NZ_MYDG01000016.1 Protein Homology CDS 53821 54999 . + 0 ID=cds-WP_000665977.1;Parent=gene-SO06_RS18200;Dbxref=GenBank:WP_000665977.1;Name=WP_000665977.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=SO06_RS18200;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665977.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 55429 56265 . + . ID=gene-SO06_RS18210;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=SO06_RS18210 NZ_MYDG01000016.1 Protein Homology CDS 55429 56265 . + 0 ID=cds-WP_000383270.1;Parent=gene-SO06_RS18210;Dbxref=GenBank:WP_000383270.1;Name=WP_000383270.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=SO06_RS18210;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383270.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 56322 57083 . + . ID=gene-SO06_RS18215;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=SO06_RS18215 NZ_MYDG01000016.1 Protein Homology CDS 56322 57083 . + 0 ID=cds-WP_000602491.1;Parent=gene-SO06_RS18215;Dbxref=GenBank:WP_000602491.1;Name=WP_000602491.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=SO06_RS18215;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000602491.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 57437 58855 . + . ID=gene-SO06_RS18220;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=SO06_RS18220 NZ_MYDG01000016.1 Protein Homology CDS 57437 58855 . + 0 ID=cds-WP_000253650.1;Parent=gene-SO06_RS18220;Dbxref=GenBank:WP_000253650.1;Name=WP_000253650.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=SO06_RS18220;product=arabinose-proton symporter AraE;protein_id=WP_000253650.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 58968 59675 . + . ID=gene-SO06_RS18225;Name=SO06_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18225 NZ_MYDG01000016.1 Protein Homology CDS 58968 59675 . + 0 ID=cds-WP_000848629.1;Parent=gene-SO06_RS18225;Dbxref=GenBank:WP_000848629.1;Name=WP_000848629.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=SO06_RS18225;product=aspartate/glutamate racemase;protein_id=WP_000848629.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 59647 60582 . - . ID=gene-SO06_RS18230;Name=SO06_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18230 NZ_MYDG01000016.1 Protein Homology CDS 59647 60582 . - 0 ID=cds-WP_023232683.1;Parent=gene-SO06_RS18230;Dbxref=GenBank:WP_023232683.1;Name=WP_023232683.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=SO06_RS18230;product=LysR family transcriptional regulator;protein_id=WP_023232683.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 60700 61962 . + . ID=gene-SO06_RS18235;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=SO06_RS18235 NZ_MYDG01000016.1 Protein Homology CDS 60700 61962 . + 0 ID=cds-WP_000056587.1;Parent=gene-SO06_RS18235;Dbxref=GenBank:WP_000056587.1;Name=WP_000056587.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=SO06_RS18235;product=diaminopimelate decarboxylase;protein_id=WP_000056587.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 61972 62994 . - . ID=gene-SO06_RS18240;Name=SO06_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18240 NZ_MYDG01000016.1 Protein Homology CDS 61972 62994 . - 0 ID=cds-WP_000968346.1;Parent=gene-SO06_RS18240;Dbxref=GenBank:WP_000968346.1;Name=WP_000968346.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=SO06_RS18240;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000968346.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 63005 64033 . - . ID=gene-SO06_RS18245;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=SO06_RS18245 NZ_MYDG01000016.1 Protein Homology CDS 63005 64033 . - 0 ID=cds-WP_000201030.1;Parent=gene-SO06_RS18245;Dbxref=GenBank:WP_000201030.1;Name=WP_000201030.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=SO06_RS18245;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201030.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 64626 66785 . + . ID=gene-SO06_RS18250;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=SO06_RS18250 NZ_MYDG01000016.1 Protein Homology CDS 64626 66785 . + 0 ID=cds-WP_000896096.1;Parent=gene-SO06_RS18250;Dbxref=GenBank:WP_000896096.1;Name=WP_000896096.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=SO06_RS18250;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000896096.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 66778 67980 . + . ID=gene-SO06_RS18255;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=SO06_RS18255 NZ_MYDG01000016.1 Protein Homology CDS 66778 67980 . + 0 ID=cds-WP_000004686.1;Parent=gene-SO06_RS18255;Dbxref=GenBank:WP_000004686.1;Name=WP_000004686.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=SO06_RS18255;product=lysophospholipid transporter LplT;protein_id=WP_000004686.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 68067 69107 . - . ID=gene-SO06_RS18260;Name=SO06_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18260 NZ_MYDG01000016.1 Protein Homology CDS 68067 69107 . - 0 ID=cds-WP_000558960.1;Parent=gene-SO06_RS18260;Dbxref=GenBank:WP_000558960.1;Name=WP_000558960.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=SO06_RS18260;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_000558960.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 69298 69516 . - . ID=gene-SO06_RS18265;Name=SO06_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18265 NZ_MYDG01000016.1 Protein Homology CDS 69298 69516 . - 0 ID=cds-WP_000758662.1;Parent=gene-SO06_RS18265;Dbxref=GenBank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=SO06_RS18265;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 69686 70399 . - . ID=gene-SO06_RS18270;Name=SO06_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18270 NZ_MYDG01000016.1 Protein Homology CDS 69686 70399 . - 0 ID=cds-WP_000895635.1;Parent=gene-SO06_RS18270;Dbxref=GenBank:WP_000895635.1;Name=WP_000895635.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=SO06_RS18270;product=TerC family protein;protein_id=WP_000895635.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 70581 71276 . - . ID=gene-SO06_RS18275;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=SO06_RS18275 NZ_MYDG01000016.1 Protein Homology CDS 70581 71276 . - 0 ID=cds-WP_001274930.1;Parent=gene-SO06_RS18275;Dbxref=GenBank:WP_001274930.1;Name=WP_001274930.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=SO06_RS18275;product=DNA mismatch repair endonuclease MutH;protein_id=WP_001274930.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 71959 72489 . + . ID=gene-SO06_RS18280;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=SO06_RS18280 NZ_MYDG01000016.1 Protein Homology CDS 71959 72489 . + 0 ID=cds-WP_000564481.1;Parent=gene-SO06_RS18280;Dbxref=GenBank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=SO06_RS18280;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 72502 74748 . + . ID=gene-SO06_RS18285;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=SO06_RS18285 NZ_MYDG01000016.1 Protein Homology CDS 72502 74748 . + 0 ID=cds-WP_000957888.1;Parent=gene-SO06_RS18285;Dbxref=GenBank:WP_000957888.1;Name=WP_000957888.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=SO06_RS18285;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957888.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 74964 75839 . + . ID=gene-SO06_RS18290;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=SO06_RS18290 NZ_MYDG01000016.1 Protein Homology CDS 74964 75839 . + 0 ID=cds-WP_000204645.1;Parent=gene-SO06_RS18290;Dbxref=GenBank:WP_000204645.1;Name=WP_000204645.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=SO06_RS18290;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204645.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 75846 76640 . + . ID=gene-SO06_RS18295;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=SO06_RS18295 NZ_MYDG01000016.1 Protein Homology CDS 75846 76640 . + 0 ID=cds-WP_000816247.1;Parent=gene-SO06_RS18295;Dbxref=GenBank:WP_000816247.1;Name=WP_000816247.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=SO06_RS18295;product=thymidylate synthase;protein_id=WP_000816247.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 76825 77295 . + . ID=gene-SO06_RS18305;Name=SO06_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18305 NZ_MYDG01000016.1 Protein Homology CDS 76825 77295 . + 0 ID=cds-WP_000744668.1;Parent=gene-SO06_RS18305;Dbxref=GenBank:WP_000744668.1;Name=WP_000744668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=SO06_RS18305;product=prepilin peptidase-dependent protein;protein_id=WP_000744668.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 77286 77849 . + . ID=gene-SO06_RS18310;Name=SO06_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18310 NZ_MYDG01000016.1 Protein Homology CDS 77286 77849 . + 0 ID=cds-WP_000029150.1;Parent=gene-SO06_RS18310;Dbxref=GenBank:WP_000029150.1;Name=WP_000029150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=SO06_RS18310;product=prepilin peptidase-dependent protein;protein_id=WP_000029150.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 77846 78253 . + . ID=gene-SO06_RS18315;Name=SO06_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18315 NZ_MYDG01000016.1 Protein Homology CDS 77846 78253 . + 0 ID=cds-WP_023232684.1;Parent=gene-SO06_RS18315;Dbxref=GenBank:WP_023232684.1;Name=WP_023232684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=SO06_RS18315;product=DUF2509 family protein;protein_id=WP_023232684.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 78238 78558 . + . ID=gene-SO06_RS18320;Name=SO06_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18320 NZ_MYDG01000016.1 Protein Homology CDS 78238 78558 . + 0 ID=cds-WP_000019286.1;Parent=gene-SO06_RS18320;Dbxref=GenBank:WP_000019286.1;Name=WP_000019286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=SO06_RS18320;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_000019286.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 78574 81945 . + . ID=gene-SO06_RS18325;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=SO06_RS18325 NZ_MYDG01000016.1 Protein Homology CDS 78574 81945 . + 0 ID=cds-WP_000946832.1;Parent=gene-SO06_RS18325;Dbxref=GenBank:WP_000946832.1;Name=WP_000946832.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=SO06_RS18325;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_000946832.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 82123 85011 . + . ID=gene-SO06_RS18330;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=SO06_RS18330 NZ_MYDG01000016.1 Protein Homology CDS 82123 85011 . + 0 ID=cds-WP_023232685.1;Parent=gene-SO06_RS18330;Dbxref=GenBank:WP_023232685.1;Name=WP_023232685.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=SO06_RS18330;product=pitrilysin;protein_id=WP_023232685.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 85004 88549 . + . ID=gene-SO06_RS18335;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=SO06_RS18335 NZ_MYDG01000016.1 Protein Homology CDS 85004 88549 . + 0 ID=cds-WP_023232686.1;Parent=gene-SO06_RS18335;Dbxref=GenBank:WP_023232686.1;Name=WP_023232686.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=SO06_RS18335;product=exodeoxyribonuclease V subunit beta;protein_id=WP_023232686.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 88546 90381 . + . ID=gene-SO06_RS18340;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=SO06_RS18340 NZ_MYDG01000016.1 Protein Homology CDS 88546 90381 . + 0 ID=cds-WP_001660909.1;Parent=gene-SO06_RS18340;Dbxref=GenBank:WP_001660909.1;Name=WP_001660909.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=SO06_RS18340;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_001660909.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 90484 91815 . - . ID=gene-SO06_RS18345;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=SO06_RS18345 NZ_MYDG01000016.1 Protein Homology CDS 90484 91815 . - 0 ID=cds-WP_000588964.1;Parent=gene-SO06_RS18345;Dbxref=GenBank:WP_000588964.1;Name=WP_000588964.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=SO06_RS18345;product=amino-acid N-acetyltransferase;protein_id=WP_000588964.1;transl_table=11 NZ_MYDG01000016.1 RefSeq gene 92048 93301 . + . ID=gene-SO06_RS18350;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=SO06_RS18350 NZ_MYDG01000016.1 Protein Homology CDS 92048 93301 . + 0 ID=cds-WP_000011919.1;Parent=gene-SO06_RS18350;Dbxref=GenBank:WP_000011919.1;Name=WP_000011919.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=SO06_RS18350;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000011919.1;transl_table=11 ##sequence-region NZ_MYDG01000017.1 1 92559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000017.1 RefSeq region 1 92559 . + . ID=NZ_MYDG01000017.1:1..92559;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000017.1 RefSeq gene 97 642 . - . ID=gene-SO06_RS18360;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=SO06_RS18360 NZ_MYDG01000017.1 Protein Homology CDS 97 642 . - 0 ID=cds-WP_000853982.1;Parent=gene-SO06_RS18360;Dbxref=GenBank:WP_000853982.1;Name=WP_000853982.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=SO06_RS18360;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853982.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 654 2105 . - . ID=gene-SO06_RS18365;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=SO06_RS18365 NZ_MYDG01000017.1 Protein Homology CDS 654 2105 . - 0 ID=cds-WP_000545688.1;Parent=gene-SO06_RS18365;Dbxref=GenBank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=SO06_RS18365;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 2144 2758 . - . ID=gene-SO06_RS18370;Name=SO06_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18370 NZ_MYDG01000017.1 Protein Homology CDS 2144 2758 . - 0 ID=cds-WP_000378894.1;Parent=gene-SO06_RS18370;Dbxref=GenBank:WP_000378894.1;Name=WP_000378894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=SO06_RS18370;product=IMPACT family protein;protein_id=WP_000378894.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 2758 4089 . - . ID=gene-SO06_RS18375;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=SO06_RS18375 NZ_MYDG01000017.1 Protein Homology CDS 2758 4089 . - 0 ID=cds-WP_000444529.1;Parent=gene-SO06_RS18375;Dbxref=GenBank:WP_000444529.1;Name=WP_000444529.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=SO06_RS18375;product=Xaa-Pro dipeptidase;protein_id=WP_000444529.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 4279 6468 . + . ID=gene-SO06_RS18380;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=SO06_RS18380 NZ_MYDG01000017.1 Protein Homology CDS 4279 6468 . + 0 ID=cds-WP_000966001.1;Parent=gene-SO06_RS18380;Dbxref=GenBank:WP_000966001.1;Name=WP_000966001.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=SO06_RS18380;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000966001.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 6478 7641 . + . ID=gene-SO06_RS18385;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=SO06_RS18385 NZ_MYDG01000017.1 Protein Homology CDS 6478 7641 . + 0 ID=cds-WP_023232416.1;Parent=gene-SO06_RS18385;Dbxref=GenBank:WP_023232416.1;Name=WP_023232416.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=SO06_RS18385;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_023232416.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 7838 9661 . - . ID=gene-SO06_RS18390;Name=SO06_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18390 NZ_MYDG01000017.1 Protein Homology CDS 7838 9661 . - 0 ID=cds-WP_023232417.1;Parent=gene-SO06_RS18390;Dbxref=GenBank:WP_023232417.1;Name=WP_023232417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=SO06_RS18390;product=aryl-sulfate sulfotransferase;protein_id=WP_023232417.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 9915 10616 . - . ID=gene-SO06_RS18395;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=SO06_RS18395 NZ_MYDG01000017.1 Protein Homology CDS 9915 10616 . - 0 ID=cds-WP_000209831.1;Parent=gene-SO06_RS18395;Dbxref=GenBank:WP_000209831.1;Name=WP_000209831.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=SO06_RS18395;product=NAD(P)H-flavin reductase;protein_id=WP_000209831.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 10702 12180 . - . ID=gene-SO06_RS18400;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=SO06_RS18400 NZ_MYDG01000017.1 Protein Homology CDS 10702 12180 . - 0 ID=cds-WP_000339760.1;Parent=gene-SO06_RS18400;Dbxref=GenBank:WP_000339760.1;Name=WP_000339760.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=SO06_RS18400;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339760.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 12366 12854 . + . ID=gene-SO06_RS18405;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=SO06_RS18405 NZ_MYDG01000017.1 Protein Homology CDS 12366 12854 . + 0 ID=cds-WP_023232418.1;Parent=gene-SO06_RS18405;Dbxref=GenBank:WP_023232418.1;Name=WP_023232418.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=SO06_RS18405;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_023232418.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 12862 13644 . - . ID=gene-SO06_RS18410;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=SO06_RS18410 NZ_MYDG01000017.1 Protein Homology CDS 12862 13644 . - 0 ID=cds-WP_000459642.1;Parent=gene-SO06_RS18410;Dbxref=GenBank:WP_000459642.1;Name=WP_000459642.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=SO06_RS18410;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459642.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 13686 14465 . - . ID=gene-SO06_RS18415;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=SO06_RS18415 NZ_MYDG01000017.1 Protein Homology CDS 13686 14465 . - 0 ID=cds-WP_000257554.1;Parent=gene-SO06_RS18415;Dbxref=GenBank:WP_000257554.1;Name=WP_000257554.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=SO06_RS18415;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000257554.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 14468 15016 . - . ID=gene-SO06_RS18420;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=SO06_RS18420 NZ_MYDG01000017.1 Protein Homology CDS 14468 15016 . - 0 ID=cds-WP_017442067.1;Parent=gene-SO06_RS18420;Dbxref=GenBank:WP_017442067.1;Name=WP_017442067.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=SO06_RS18420;product=Sec-independent protein translocase protein TatB;protein_id=WP_017442067.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 15020 15274 . - . ID=gene-SO06_RS18425;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=SO06_RS18425 NZ_MYDG01000017.1 Protein Homology CDS 15020 15274 . - 0 ID=cds-WP_000508972.1;Parent=gene-SO06_RS18425;Dbxref=GenBank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=SO06_RS18425;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 15480 17120 . - . ID=gene-SO06_RS18430;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=SO06_RS18430 NZ_MYDG01000017.1 Protein Homology CDS 15480 17120 . - 0 ID=cds-WP_000187559.1;Parent=gene-SO06_RS18430;Dbxref=GenBank:WP_000187559.1;Name=WP_000187559.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=SO06_RS18430;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187559.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 17117 17722 . - . ID=gene-SO06_RS18435;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=SO06_RS18435 NZ_MYDG01000017.1 Protein Homology CDS 17117 17722 . - 0 ID=cds-WP_001116092.1;Parent=gene-SO06_RS18435;Dbxref=GenBank:WP_001116092.1;Name=WP_001116092.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=SO06_RS18435;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001116092.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 17732 18487 . - . ID=gene-SO06_RS18440;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=SO06_RS18440 NZ_MYDG01000017.1 Protein Homology CDS 17732 18487 . - 0 ID=cds-WP_000229009.1;Parent=gene-SO06_RS18440;Dbxref=GenBank:WP_000229009.1;Name=WP_000229009.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=SO06_RS18440;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 18583 20013 . - . ID=gene-SO06_RS18445;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=SO06_RS18445 NZ_MYDG01000017.1 Protein Homology CDS 18583 20013 . - 0 ID=cds-WP_000355562.1;Parent=gene-SO06_RS18445;Dbxref=GenBank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=SO06_RS18445;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 20153 20914 . - . ID=gene-SO06_RS18450;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=SO06_RS18450 NZ_MYDG01000017.1 Protein Homology CDS 20153 20914 . - 0 ID=cds-WP_000045169.1;Parent=gene-SO06_RS18450;Dbxref=GenBank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=SO06_RS18450;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 21173 21985 . + . ID=gene-SO06_RS18455;Name=SO06_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18455 NZ_MYDG01000017.1 Protein Homology CDS 21173 21985 . + 0 ID=cds-WP_000213959.1;Parent=gene-SO06_RS18455;Dbxref=GenBank:WP_000213959.1;Name=WP_000213959.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=SO06_RS18455;product=dienelactone hydrolase family protein;protein_id=WP_000213959.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 22065 23408 . - . ID=gene-SO06_RS18460;Name=SO06_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18460 NZ_MYDG01000017.1 Protein Homology CDS 22065 23408 . - 0 ID=cds-WP_021294455.1;Parent=gene-SO06_RS18460;Dbxref=GenBank:WP_021294455.1;Name=WP_021294455.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=SO06_RS18460;product=anaerobic sulfatase maturase;protein_id=WP_021294455.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 23743 26007 . - . ID=gene-SO06_RS18465;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=SO06_RS18465 NZ_MYDG01000017.1 Protein Homology CDS 23743 26007 . - 0 ID=cds-WP_000154178.1;Parent=gene-SO06_RS18465;Dbxref=GenBank:WP_000154178.1;Name=WP_000154178.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=SO06_RS18465;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000154178.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 26256 27209 . + . ID=gene-SO06_RS18470;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=SO06_RS18470 NZ_MYDG01000017.1 Protein Homology CDS 26256 27209 . + 0 ID=cds-WP_000569786.1;Parent=gene-SO06_RS18470;Dbxref=GenBank:WP_000569786.1;Name=WP_000569786.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=SO06_RS18470;product=HTH-type transcriptional regulator MetR;protein_id=WP_000569786.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 27097 27996 . - . ID=gene-SO06_RS18475;Name=SO06_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18475 NZ_MYDG01000017.1 Protein Homology CDS 27097 27996 . - 0 ID=cds-WP_023232419.1;Parent=gene-SO06_RS18475;Dbxref=GenBank:WP_023232419.1;Name=WP_023232419.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=SO06_RS18475;product=carboxylate/amino acid/amine transporter;protein_id=WP_023232419.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 28077 28877 . - . ID=gene-SO06_RS18480;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=SO06_RS18480 NZ_MYDG01000017.1 Protein Homology CDS 28077 28877 . - 0 ID=cds-WP_023232420.1;Parent=gene-SO06_RS18480;Dbxref=GenBank:WP_023232420.1;Name=WP_023232420.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=SO06_RS18480;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_023232420.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 28893 29909 . - . ID=gene-SO06_RS18485;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=SO06_RS18485 NZ_MYDG01000017.1 Protein Homology CDS 28893 29909 . - 0 ID=cds-WP_000487685.1;Parent=gene-SO06_RS18485;Dbxref=GenBank:WP_000487685.1;Name=WP_000487685.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=SO06_RS18485;product=lysophospholipase L2;protein_id=WP_000487685.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 30020 30640 . + . ID=gene-SO06_RS18490;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=SO06_RS18490 NZ_MYDG01000017.1 Protein Homology CDS 30020 30640 . + 0 ID=cds-WP_000142524.1;Parent=gene-SO06_RS18490;Dbxref=GenBank:WP_000142524.1;Name=WP_000142524.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=SO06_RS18490;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142524.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 30680 31300 . - . ID=gene-SO06_RS18495;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=SO06_RS18495 NZ_MYDG01000017.1 Protein Homology CDS 30680 31300 . - 0 ID=cds-WP_000980080.1;Parent=gene-SO06_RS18495;Dbxref=GenBank:WP_000980080.1;Name=WP_000980080.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=SO06_RS18495;product=threonine export protein RhtC;protein_id=WP_000980080.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 31364 33193 . - . ID=gene-SO06_RS18500;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=SO06_RS18500 NZ_MYDG01000017.1 Protein Homology CDS 31364 33193 . - 0 ID=cds-WP_001533487.1;Parent=gene-SO06_RS18500;Dbxref=GenBank:WP_001533487.1;Name=WP_001533487.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=SO06_RS18500;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001533487.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 33277 34146 . - . ID=gene-SO06_RS18505;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=SO06_RS18505 NZ_MYDG01000017.1 Protein Homology CDS 33277 34146 . - 0 ID=cds-WP_001201692.1;Parent=gene-SO06_RS18505;Dbxref=GenBank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=SO06_RS18505;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 34311 34778 . + . ID=gene-SO06_RS18510;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=SO06_RS18510 NZ_MYDG01000017.1 Protein Homology CDS 34311 34778 . + 0 ID=cds-WP_023232421.1;Parent=gene-SO06_RS18510;Dbxref=GenBank:WP_023232421.1;Name=WP_023232421.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=SO06_RS18510;product=acyl-CoA thioesterase YigI;protein_id=WP_023232421.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 34822 35706 . + . ID=gene-SO06_RS18515;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=SO06_RS18515 NZ_MYDG01000017.1 Protein Homology CDS 34822 35706 . + 0 ID=cds-WP_000339080.1;Parent=gene-SO06_RS18515;Dbxref=GenBank:WP_000339080.1;Name=WP_000339080.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462840.1;locus_tag=SO06_RS18515;product=EamA family transporter RarD;protein_id=WP_000339080.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 35741 36199 . + . ID=gene-SO06_RS18520;Name=SO06_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18520 NZ_MYDG01000017.1 Protein Homology CDS 35741 36199 . + 0 ID=cds-WP_023138668.1;Parent=gene-SO06_RS18520;Dbxref=GenBank:WP_023138668.1;Name=WP_023138668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462839.1;locus_tag=SO06_RS18520;product=hypothetical protein;protein_id=WP_023138668.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 36215 36595 . + . ID=gene-SO06_RS18525;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;locus_tag=SO06_RS18525 NZ_MYDG01000017.1 Protein Homology CDS 36215 36595 . + 0 ID=cds-WP_000356594.1;Parent=gene-SO06_RS18525;Dbxref=GenBank:WP_000356594.1;Name=WP_000356594.1;gbkey=CDS;gene=yigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462838.1;locus_tag=SO06_RS18525;product=inner membrane protein YigF;protein_id=WP_000356594.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 36644 37594 . - . ID=gene-SO06_RS18530;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=SO06_RS18530 NZ_MYDG01000017.1 Protein Homology CDS 36644 37594 . - 0 ID=cds-WP_000947139.1;Parent=gene-SO06_RS18530;Dbxref=GenBank:WP_000947139.1;Name=WP_000947139.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=SO06_RS18530;product=magnesium/cobalt transporter CorA;protein_id=WP_000947139.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 37750 37806 . - . ID=gene-SO06_RS25385;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=SO06_RS25385 NZ_MYDG01000017.1 Protein Homology CDS 37750 37806 . - 0 ID=cds-WP_212723238.1;Parent=gene-SO06_RS25385;Dbxref=GenBank:WP_212723238.1;Name=WP_212723238.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=SO06_RS25385;product=YsgD/CorL family protein;protein_id=WP_212723238.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 38066 40228 . - . ID=gene-SO06_RS18540;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=SO06_RS18540 NZ_MYDG01000017.1 Protein Homology CDS 38066 40228 . - 0 ID=cds-WP_000383436.1;Parent=gene-SO06_RS18540;Dbxref=GenBank:WP_000383436.1;Name=WP_000383436.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=SO06_RS18540;product=DNA helicase II;protein_id=WP_000383436.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 40364 41080 . - . ID=gene-SO06_RS18545;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=SO06_RS18545 NZ_MYDG01000017.1 Protein Homology CDS 40364 41080 . - 0 ID=cds-WP_001213560.1;Parent=gene-SO06_RS18545;Dbxref=GenBank:WP_001213560.1;Name=WP_001213560.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=SO06_RS18545;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213560.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 41080 41982 . - . ID=gene-SO06_RS18550;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=SO06_RS18550 NZ_MYDG01000017.1 Protein Homology CDS 41080 41982 . - 0 ID=cds-WP_023232422.1;Parent=gene-SO06_RS18550;Dbxref=GenBank:WP_023232422.1;Name=WP_023232422.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=SO06_RS18550;product=tyrosine recombinase XerC;protein_id=WP_023232422.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 41979 42686 . - . ID=gene-SO06_RS18555;Name=SO06_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18555 NZ_MYDG01000017.1 Protein Homology CDS 41979 42686 . - 0 ID=cds-WP_000812768.1;Parent=gene-SO06_RS18555;Dbxref=GenBank:WP_000812768.1;Name=WP_000812768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=SO06_RS18555;product=DUF484 domain-containing protein;protein_id=WP_000812768.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 42683 43507 . - . ID=gene-SO06_RS18560;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=SO06_RS18560 NZ_MYDG01000017.1 Protein Homology CDS 42683 43507 . - 0 ID=cds-WP_001160671.1;Parent=gene-SO06_RS18560;Dbxref=GenBank:WP_001160671.1;Name=WP_001160671.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=SO06_RS18560;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 43544 43747 . - . ID=gene-SO06_RS18565;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=SO06_RS18565 NZ_MYDG01000017.1 Protein Homology CDS 43544 43747 . - 0 ID=cds-WP_000799903.1;Parent=gene-SO06_RS18565;Dbxref=GenBank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=SO06_RS18565;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799903.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 43933 44184 . + . ID=gene-SO06_RS25300;Name=SO06_RS25300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25300 NZ_MYDG01000017.1 GeneMarkS-2+ CDS 43933 44184 . + 0 ID=cds-WP_023888879.1;Parent=gene-SO06_RS25300;Dbxref=GenBank:WP_023888879.1;Name=WP_023888879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS25300;product=hypothetical protein;protein_id=WP_023888879.1;transl_table=11 NZ_MYDG01000017.1 RefSeq pseudogene 44154 44453 . + . ID=gene-SO06_RS18570;Name=SO06_RS18570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS18570;partial=true;pseudo=true;start_range=.,44154 NZ_MYDG01000017.1 Protein Homology CDS 44154 44453 . + 0 ID=cds-SO06_RS18570;Parent=gene-SO06_RS18570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200019.1;locus_tag=SO06_RS18570;partial=true;product=hypothetical protein;pseudo=true;start_range=.,44154;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 44441 44830 . + . ID=gene-SO06_RS18575;Name=SO06_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18575 NZ_MYDG01000017.1 Protein Homology CDS 44441 44830 . + 0 ID=cds-WP_001125561.1;Parent=gene-SO06_RS18575;Dbxref=GenBank:WP_001125561.1;Name=WP_001125561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=SO06_RS18575;product=DUF3021 family protein;protein_id=WP_001125561.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 44900 45220 . + . ID=gene-SO06_RS18580;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=SO06_RS18580 NZ_MYDG01000017.1 Protein Homology CDS 44900 45220 . + 0 ID=cds-WP_000999925.1;Parent=gene-SO06_RS18580;Dbxref=GenBank:WP_000999925.1;Name=WP_000999925.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=SO06_RS18580;product=iron donor protein CyaY;protein_id=WP_000999925.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 45291 45653 . - . ID=gene-SO06_RS18585;Name=SO06_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18585 NZ_MYDG01000017.1 Protein Homology CDS 45291 45653 . - 0 ID=cds-WP_010989084.1;Parent=gene-SO06_RS18585;Dbxref=GenBank:WP_010989084.1;Name=WP_010989084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462828.1;locus_tag=SO06_RS18585;product=hypothetical protein;protein_id=WP_010989084.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 45665 46207 . - . ID=gene-SO06_RS18590;Name=SO06_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18590 NZ_MYDG01000017.1 Protein Homology CDS 45665 46207 . - 0 ID=cds-WP_001747560.1;Parent=gene-SO06_RS18590;Dbxref=GenBank:WP_001747560.1;Name=WP_001747560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462827.1;locus_tag=SO06_RS18590;product=STM3941 family protein;protein_id=WP_001747560.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 46393 46749 . - . ID=gene-SO06_RS18595;Name=SO06_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18595 NZ_MYDG01000017.1 Protein Homology CDS 46393 46749 . - 0 ID=cds-WP_000752580.1;Parent=gene-SO06_RS18595;Dbxref=GenBank:WP_000752580.1;Name=WP_000752580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462826.1;locus_tag=SO06_RS18595;product=hypothetical protein;protein_id=WP_000752580.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 46857 49403 . - . ID=gene-SO06_RS18600;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=SO06_RS18600 NZ_MYDG01000017.1 Protein Homology CDS 46857 49403 . - 0 ID=cds-WP_000281718.1;Parent=gene-SO06_RS18600;Dbxref=GenBank:WP_000281718.1;Name=WP_000281718.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=SO06_RS18600;product=class I adenylate cyclase;protein_id=WP_000281718.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 49780 50721 . + . ID=gene-SO06_RS18605;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=SO06_RS18605 NZ_MYDG01000017.1 Protein Homology CDS 49780 50721 . + 0 ID=cds-WP_023232424.1;Parent=gene-SO06_RS18605;Dbxref=GenBank:WP_023232424.1;Name=WP_023232424.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=SO06_RS18605;product=hydroxymethylbilane synthase;protein_id=WP_023232424.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 50718 51458 . + . ID=gene-SO06_RS18610;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=SO06_RS18610 NZ_MYDG01000017.1 Protein Homology CDS 50718 51458 . + 0 ID=cds-WP_000025494.1;Parent=gene-SO06_RS18610;Dbxref=GenBank:WP_000025494.1;Name=WP_000025494.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=SO06_RS18610;product=uroporphyrinogen-III synthase;protein_id=WP_000025494.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 51480 52649 . + . ID=gene-SO06_RS18615;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=SO06_RS18615 NZ_MYDG01000017.1 Protein Homology CDS 51480 52649 . + 0 ID=cds-WP_000138967.1;Parent=gene-SO06_RS18615;Dbxref=GenBank:WP_000138967.1;Name=WP_000138967.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=SO06_RS18615;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000138967.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 52652 53848 . + . ID=gene-SO06_RS18620;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=SO06_RS18620 NZ_MYDG01000017.1 Protein Homology CDS 52652 53848 . + 0 ID=cds-WP_023602562.1;Parent=gene-SO06_RS18620;Dbxref=GenBank:WP_023602562.1;Name=WP_023602562.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=SO06_RS18620;product=protoheme IX biogenesis protein HemY;protein_id=WP_023602562.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 54429 54505 . - . ID=gene-SO06_RS18625;Name=SO06_RS18625;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS18625 NZ_MYDG01000017.1 tRNAscan-SE tRNA 54429 54505 . - . ID=rna-SO06_RS18625;Parent=gene-SO06_RS18625;anticodon=(pos:complement(54469..54471));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS18625;product=tRNA-Pro NZ_MYDG01000017.1 tRNAscan-SE exon 54429 54505 . - . ID=exon-SO06_RS18625-1;Parent=rna-SO06_RS18625;anticodon=(pos:complement(54469..54471));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS18625;product=tRNA-Pro NZ_MYDG01000017.1 RefSeq gene 54548 54634 . - . ID=gene-SO06_RS18630;Name=SO06_RS18630;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS18630 NZ_MYDG01000017.1 tRNAscan-SE tRNA 54548 54634 . - . ID=rna-SO06_RS18630;Parent=gene-SO06_RS18630;anticodon=(pos:complement(54598..54600));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS18630;product=tRNA-Leu NZ_MYDG01000017.1 tRNAscan-SE exon 54548 54634 . - . ID=exon-SO06_RS18630-1;Parent=rna-SO06_RS18630;anticodon=(pos:complement(54598..54600));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS18630;product=tRNA-Leu NZ_MYDG01000017.1 RefSeq gene 54655 54730 . - . ID=gene-SO06_RS18635;Name=SO06_RS18635;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS18635 NZ_MYDG01000017.1 tRNAscan-SE tRNA 54655 54730 . - . ID=rna-SO06_RS18635;Parent=gene-SO06_RS18635;anticodon=(pos:complement(54695..54697));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS18635;product=tRNA-His NZ_MYDG01000017.1 tRNAscan-SE exon 54655 54730 . - . ID=exon-SO06_RS18635-1;Parent=rna-SO06_RS18635;anticodon=(pos:complement(54695..54697));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS18635;product=tRNA-His NZ_MYDG01000017.1 RefSeq gene 54785 54861 . - . ID=gene-SO06_RS18640;Name=SO06_RS18640;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS18640 NZ_MYDG01000017.1 tRNAscan-SE tRNA 54785 54861 . - . ID=rna-SO06_RS18640;Parent=gene-SO06_RS18640;anticodon=(pos:complement(54825..54827));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS18640;product=tRNA-Arg NZ_MYDG01000017.1 tRNAscan-SE exon 54785 54861 . - . ID=exon-SO06_RS18640-1;Parent=rna-SO06_RS18640;anticodon=(pos:complement(54825..54827));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS18640;product=tRNA-Arg NZ_MYDG01000017.1 RefSeq gene 54964 56349 . - . ID=gene-SO06_RS18645;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=SO06_RS18645 NZ_MYDG01000017.1 Protein Homology CDS 54964 56349 . - 0 ID=cds-WP_023232425.1;Parent=gene-SO06_RS18645;Dbxref=GenBank:WP_023232425.1;Name=WP_023232425.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=SO06_RS18645;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_023232425.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 56556 57296 . - . ID=gene-SO06_RS18650;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=SO06_RS18650 NZ_MYDG01000017.1 Protein Homology CDS 56556 57296 . - 0 ID=cds-WP_000183621.1;Parent=gene-SO06_RS18650;Dbxref=GenBank:WP_000183621.1;Name=WP_000183621.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=SO06_RS18650;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183621.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 57293 58651 . - . ID=gene-SO06_RS18655;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=SO06_RS18655 NZ_MYDG01000017.1 Protein Homology CDS 57293 58651 . - 0 ID=cds-WP_000055611.1;Parent=gene-SO06_RS18655;Dbxref=GenBank:WP_000055611.1;Name=WP_000055611.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=SO06_RS18655;product=ECA oligosaccharide polymerase;protein_id=WP_000055611.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 58648 59727 . - . ID=gene-SO06_RS18660;Name=SO06_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18660 NZ_MYDG01000017.1 Protein Homology CDS 58648 59727 . - 0 ID=cds-WP_023232426.1;Parent=gene-SO06_RS18660;Dbxref=GenBank:WP_023232426.1;Name=WP_023232426.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=SO06_RS18660;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_023232426.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 59724 60974 . - . ID=gene-SO06_RS18665;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=SO06_RS18665 NZ_MYDG01000017.1 Protein Homology CDS 59724 60974 . - 0 ID=cds-WP_023232427.1;Parent=gene-SO06_RS18665;Dbxref=GenBank:WP_023232427.1;Name=WP_023232427.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=SO06_RS18665;product=lipid III flippase WzxE;protein_id=WP_023232427.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 60976 62106 . - . ID=gene-SO06_RS18670;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=SO06_RS18670 NZ_MYDG01000017.1 Protein Homology CDS 60976 62106 . - 0 ID=cds-WP_000612080.1;Parent=gene-SO06_RS18670;Dbxref=GenBank:WP_000612080.1;Name=WP_000612080.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=SO06_RS18670;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612080.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 62111 62788 . - . ID=gene-SO06_RS18675;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=SO06_RS18675 NZ_MYDG01000017.1 Protein Homology CDS 62111 62788 . - 0 ID=cds-WP_001145154.1;Parent=gene-SO06_RS18675;Dbxref=GenBank:WP_001145154.1;Name=WP_001145154.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=SO06_RS18675;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145154.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 62766 63080 . - . ID=gene-SO06_RS18680;Name=SO06_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18680 NZ_MYDG01000017.1 Protein Homology CDS 62766 63080 . - 0 ID=cds-WP_223156439.1;Parent=gene-SO06_RS18680;Dbxref=GenBank:WP_223156439.1;Name=WP_223156439.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=SO06_RS18680;product=sugar phosphate nucleotidyltransferase;protein_id=WP_223156439.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 63023 64090 . - . ID=gene-SO06_RS18685;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=SO06_RS18685 NZ_MYDG01000017.1 Protein Homology CDS 63023 64090 . - 0 ID=cds-WP_023232428.1;Parent=gene-SO06_RS18685;Dbxref=GenBank:WP_023232428.1;Name=WP_023232428.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=SO06_RS18685;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_023232428.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 64090 65352 . - . ID=gene-SO06_RS18690;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=SO06_RS18690 NZ_MYDG01000017.1 Protein Homology CDS 64090 65352 . - 0 ID=cds-WP_000011236.1;Parent=gene-SO06_RS18690;Dbxref=GenBank:WP_000011236.1;Name=WP_000011236.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=SO06_RS18690;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000011236.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 65349 66479 . - . ID=gene-SO06_RS18695;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=SO06_RS18695 NZ_MYDG01000017.1 Protein Homology CDS 65349 66479 . - 0 ID=cds-WP_000866676.1;Parent=gene-SO06_RS18695;Dbxref=GenBank:WP_000866676.1;Name=WP_000866676.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=SO06_RS18695;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866676.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 66535 67581 . - . ID=gene-SO06_RS18700;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=SO06_RS18700 NZ_MYDG01000017.1 Protein Homology CDS 66535 67581 . - 0 ID=cds-WP_000193413.1;Parent=gene-SO06_RS18700;Dbxref=GenBank:WP_000193413.1;Name=WP_000193413.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=SO06_RS18700;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193413.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 67593 68696 . - . ID=gene-SO06_RS18705;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=SO06_RS18705 NZ_MYDG01000017.1 Protein Homology CDS 67593 68696 . - 0 ID=cds-WP_000771937.1;Parent=gene-SO06_RS18705;Dbxref=GenBank:WP_000771937.1;Name=WP_000771937.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=SO06_RS18705;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_000771937.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 68926 70185 . - . ID=gene-SO06_RS18710;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=SO06_RS18710 NZ_MYDG01000017.1 Protein Homology CDS 68926 70185 . - 0 ID=cds-WP_001054532.1;Parent=gene-SO06_RS18710;Dbxref=GenBank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=SO06_RS18710;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 70273 70356 . - . ID=gene-SO06_RS25610;Name=SO06_RS25610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25610 NZ_MYDG01000017.1 Protein Homology CDS 70273 70356 . - 0 ID=cds-WP_134820045.1;Parent=gene-SO06_RS25610;Dbxref=GenBank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=SO06_RS25610;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 70604 70933 . - . ID=gene-SO06_RS18715;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=SO06_RS18715 NZ_MYDG01000017.1 Protein Homology CDS 70604 70933 . - 0 ID=cds-WP_001280776.1;Parent=gene-SO06_RS18715;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=SO06_RS18715;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 71077 72342 . + . ID=gene-SO06_RS18720;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=SO06_RS18720 NZ_MYDG01000017.1 Protein Homology CDS 71077 72342 . + 0 ID=cds-WP_000047525.1;Parent=gene-SO06_RS18720;Dbxref=GenBank:WP_000047525.1;Name=WP_000047525.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=SO06_RS18720;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047525.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 72461 73942 . + . ID=gene-SO06_RS18725;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=SO06_RS18725 NZ_MYDG01000017.1 Protein Homology CDS 72461 73942 . + 0 ID=cds-WP_001089447.1;Parent=gene-SO06_RS18725;Dbxref=GenBank:WP_001089447.1;Name=WP_001089447.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=SO06_RS18725;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001089447.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 73982 76006 . - . ID=gene-SO06_RS18730;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=SO06_RS18730 NZ_MYDG01000017.1 Protein Homology CDS 73982 76006 . - 0 ID=cds-WP_023232429.1;Parent=gene-SO06_RS18730;Dbxref=GenBank:WP_023232429.1;Name=WP_023232429.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=SO06_RS18730;product=DNA helicase Rep;protein_id=WP_023232429.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 76106 76834 . - . ID=gene-SO06_RS18735;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=SO06_RS18735 NZ_MYDG01000017.1 Protein Homology CDS 76106 76834 . - 0 ID=cds-WP_023232430.1;Parent=gene-SO06_RS18735;Dbxref=GenBank:WP_023232430.1;Name=WP_023232430.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=SO06_RS18735;product=nicotinamide riboside transporter PnuC;protein_id=WP_023232430.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 76834 77577 . - . ID=gene-SO06_RS18740;Name=SO06_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18740 NZ_MYDG01000017.1 Protein Homology CDS 76834 77577 . - 0 ID=cds-WP_001182428.1;Parent=gene-SO06_RS18740;Dbxref=GenBank:WP_001182428.1;Name=WP_001182428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182423.1;locus_tag=SO06_RS18740;product=nucleoside phosphorylase;protein_id=WP_001182428.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 77606 78307 . - . ID=gene-SO06_RS18745;Name=SO06_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18745 NZ_MYDG01000017.1 Protein Homology CDS 77606 78307 . - 0 ID=cds-WP_001024340.1;Parent=gene-SO06_RS18745;Dbxref=GenBank:WP_001024340.1;Name=WP_001024340.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=SO06_RS18745;product=Crp/Fnr family transcriptional regulator;protein_id=WP_001024340.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 78501 78782 . + . ID=gene-SO06_RS18750;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=SO06_RS18750 NZ_MYDG01000017.1 Protein Homology CDS 78501 78782 . + 0 ID=cds-WP_001096806.1;Parent=gene-SO06_RS18750;Dbxref=GenBank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=SO06_RS18750;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 78874 80349 . - . ID=gene-SO06_RS18755;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=SO06_RS18755 NZ_MYDG01000017.1 Protein Homology CDS 78874 80349 . - 0 ID=cds-WP_000024943.1;Parent=gene-SO06_RS18755;Dbxref=GenBank:WP_000024943.1;Name=WP_000024943.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=SO06_RS18755;product=ketol-acid reductoisomerase;protein_id=WP_000024943.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 80514 81401 . + . ID=gene-SO06_RS18760;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=SO06_RS18760 NZ_MYDG01000017.1 Protein Homology CDS 80514 81401 . + 0 ID=cds-WP_000365798.1;Parent=gene-SO06_RS18760;Dbxref=GenBank:WP_000365798.1;Name=WP_000365798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=SO06_RS18760;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365798.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 81404 81745 . - . ID=gene-SO06_RS18765;Name=SO06_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18765 NZ_MYDG01000017.1 Protein Homology CDS 81404 81745 . - 0 ID=cds-WP_023232431.1;Parent=gene-SO06_RS18765;Dbxref=GenBank:WP_023232431.1;Name=WP_023232431.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=SO06_RS18765;product=helix-turn-helix domain-containing protein;protein_id=WP_023232431.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 81742 82059 . - . ID=gene-SO06_RS18770;Name=SO06_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18770 NZ_MYDG01000017.1 Protein Homology CDS 81742 82059 . - 0 ID=cds-WP_000535852.1;Parent=gene-SO06_RS18770;Dbxref=GenBank:WP_000535852.1;Name=WP_000535852.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=SO06_RS18770;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000535852.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 82342 83886 . - . ID=gene-SO06_RS18775;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=SO06_RS18775 NZ_MYDG01000017.1 Protein Homology CDS 82342 83886 . - 0 ID=cds-WP_023232432.1;Parent=gene-SO06_RS18775;Dbxref=GenBank:WP_023232432.1;Name=WP_023232432.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=SO06_RS18775;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_023232432.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 83889 85739 . - . ID=gene-SO06_RS18780;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=SO06_RS18780 NZ_MYDG01000017.1 Protein Homology CDS 83889 85739 . - 0 ID=cds-WP_001127428.1;Parent=gene-SO06_RS18780;Dbxref=GenBank:WP_001127428.1;Name=WP_001127428.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=SO06_RS18780;product=dihydroxy-acid dehydratase;protein_id=WP_001127428.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 85900 86829 . - . ID=gene-SO06_RS18785;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=SO06_RS18785 NZ_MYDG01000017.1 Protein Homology CDS 85900 86829 . - 0 ID=cds-WP_000208532.1;Parent=gene-SO06_RS18785;Dbxref=GenBank:WP_000208532.1;Name=WP_000208532.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=SO06_RS18785;product=branched-chain-amino-acid transaminase;protein_id=WP_000208532.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 86847 87110 . - . ID=gene-SO06_RS18790;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=SO06_RS18790 NZ_MYDG01000017.1 Protein Homology CDS 86847 87110 . - 0 ID=cds-WP_000983260.1;Parent=gene-SO06_RS18790;Dbxref=GenBank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=SO06_RS18790;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 87107 88753 . - . ID=gene-SO06_RS18795;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=SO06_RS18795 NZ_MYDG01000017.1 Protein Homology CDS 87107 88753 . - 0 ID=cds-WP_023232433.1;Parent=gene-SO06_RS18795;Dbxref=GenBank:WP_023232433.1;Name=WP_023232433.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=SO06_RS18795;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_023232433.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 88756 88806 . - . ID=gene-SO06_RS25390;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=SO06_RS25390 NZ_MYDG01000017.1 Protein Homology CDS 88756 88806 . - 0 ID=cds-WP_192930503.1;Parent=gene-SO06_RS25390;Dbxref=GenBank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: protein motif:HMM:NF038286.1;locus_tag=SO06_RS25390;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 88893 88991 . - . ID=gene-SO06_RS18800;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=SO06_RS18800 NZ_MYDG01000017.1 Protein Homology CDS 88893 88991 . - 0 ID=cds-WP_001311244.1;Parent=gene-SO06_RS18800;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=SO06_RS18800;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 89343 90863 . + . ID=gene-SO06_RS18805;Name=SO06_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18805 NZ_MYDG01000017.1 Protein Homology CDS 89343 90863 . + 0 ID=cds-WP_000050210.1;Parent=gene-SO06_RS18805;Dbxref=GenBank:WP_000050210.1;Name=WP_000050210.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=SO06_RS18805;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000050210.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 90888 91226 . - . ID=gene-SO06_RS18810;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=SO06_RS18810 NZ_MYDG01000017.1 Protein Homology CDS 90888 91226 . - 0 ID=cds-WP_000840996.1;Parent=gene-SO06_RS18810;Dbxref=GenBank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=SO06_RS18810;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 91333 92181 . + . ID=gene-SO06_RS18815;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=SO06_RS18815 NZ_MYDG01000017.1 Protein Homology CDS 91333 92181 . + 0 ID=cds-WP_086010515.1;Parent=gene-SO06_RS18815;Dbxref=GenBank:WP_086010515.1;Name=WP_086010515.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=SO06_RS18815;product=HTH-type transcriptional regulator HdfR;protein_id=WP_086010515.1;transl_table=11 NZ_MYDG01000017.1 RefSeq gene 92282 92357 . - . ID=gene-SO06_RS18820;Name=SO06_RS18820;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS18820 NZ_MYDG01000017.1 tRNAscan-SE tRNA 92282 92357 . - . ID=rna-SO06_RS18820;Parent=gene-SO06_RS18820;anticodon=(pos:complement(92322..92324));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS18820;product=tRNA-Trp NZ_MYDG01000017.1 tRNAscan-SE exon 92282 92357 . - . ID=exon-SO06_RS18820-1;Parent=rna-SO06_RS18820;anticodon=(pos:complement(92322..92324));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS18820;product=tRNA-Trp NZ_MYDG01000017.1 RefSeq gene 92366 92442 . - . ID=gene-SO06_RS18825;Name=SO06_RS18825;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS18825 NZ_MYDG01000017.1 tRNAscan-SE tRNA 92366 92442 . - . ID=rna-SO06_RS18825;Parent=gene-SO06_RS18825;anticodon=(pos:complement(92406..92408));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS18825;product=tRNA-Asp NZ_MYDG01000017.1 tRNAscan-SE exon 92366 92442 . - . ID=exon-SO06_RS18825-1;Parent=rna-SO06_RS18825;anticodon=(pos:complement(92406..92408));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS18825;product=tRNA-Asp ##sequence-region NZ_MYDG01000018.1 1 88921 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000018.1 RefSeq region 1 88921 . + . ID=NZ_MYDG01000018.1:1..88921;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000018.1 RefSeq gene 355 792 . - . ID=gene-SO06_RS18830;Name=SO06_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18830 NZ_MYDG01000018.1 Protein Homology CDS 355 792 . - 0 ID=cds-WP_000973248.1;Parent=gene-SO06_RS18830;Dbxref=GenBank:WP_000973248.1;Name=WP_000973248.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=SO06_RS18830;product=acetyltransferase;protein_id=WP_000973248.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 949 1878 . + . ID=gene-SO06_RS18835;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=SO06_RS18835 NZ_MYDG01000018.1 Protein Homology CDS 949 1878 . + 0 ID=cds-WP_023232405.1;Parent=gene-SO06_RS18835;Dbxref=GenBank:WP_023232405.1;Name=WP_023232405.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=SO06_RS18835;product=homoserine O-acetyltransferase MetA;protein_id=WP_023232405.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 2147 3748 . + . ID=gene-SO06_RS18840;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=SO06_RS18840 NZ_MYDG01000018.1 Protein Homology CDS 2147 3748 . + 0 ID=cds-WP_001069371.1;Parent=gene-SO06_RS18840;Dbxref=GenBank:WP_001069371.1;Name=WP_001069371.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=SO06_RS18840;product=malate synthase A;protein_id=WP_001069371.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 3780 5084 . + . ID=gene-SO06_RS18845;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=SO06_RS18845 NZ_MYDG01000018.1 Protein Homology CDS 3780 5084 . + 0 ID=cds-WP_000857882.1;Parent=gene-SO06_RS18845;Dbxref=GenBank:WP_000857882.1;Name=WP_000857882.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=SO06_RS18845;product=isocitrate lyase;protein_id=WP_000857882.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 5186 6937 . + . ID=gene-SO06_RS18850;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=SO06_RS18850 NZ_MYDG01000018.1 Protein Homology CDS 5186 6937 . + 0 ID=cds-WP_001137277.1;Parent=gene-SO06_RS18850;Dbxref=GenBank:WP_001137277.1;Name=WP_001137277.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=SO06_RS18850;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137277.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 6901 7308 . - . ID=gene-SO06_RS18855;Name=SO06_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18855 NZ_MYDG01000018.1 Protein Homology CDS 6901 7308 . - 0 ID=cds-WP_077248407.1;Parent=gene-SO06_RS18855;Dbxref=GenBank:WP_077248407.1;Name=WP_077248407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=SO06_RS18855;product=ASCH domain-containing protein;protein_id=WP_077248407.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 7319 8143 . - . ID=gene-SO06_RS18860;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=SO06_RS18860 NZ_MYDG01000018.1 Protein Homology CDS 7319 8143 . - 0 ID=cds-WP_000226430.1;Parent=gene-SO06_RS18860;Dbxref=GenBank:WP_000226430.1;Name=WP_000226430.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=SO06_RS18860;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226430.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 8448 12131 . + . ID=gene-SO06_RS18865;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=SO06_RS18865 NZ_MYDG01000018.1 Protein Homology CDS 8448 12131 . + 0 ID=cds-WP_023232406.1;Parent=gene-SO06_RS18865;Dbxref=GenBank:WP_023232406.1;Name=WP_023232406.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=SO06_RS18865;product=methionine synthase;protein_id=WP_023232406.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 12398 14029 . + . ID=gene-SO06_RS18870;Name=SO06_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18870 NZ_MYDG01000018.1 Protein Homology CDS 12398 14029 . + 0 ID=cds-WP_000956811.1;Parent=gene-SO06_RS18870;Dbxref=GenBank:WP_000956811.1;Name=WP_000956811.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=SO06_RS18870;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 14104 14793 . - . ID=gene-SO06_RS18875;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=SO06_RS18875 NZ_MYDG01000018.1 Protein Homology CDS 14104 14793 . - 0 ID=cds-WP_000421776.1;Parent=gene-SO06_RS18875;Dbxref=GenBank:WP_000421776.1;Name=WP_000421776.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=SO06_RS18875;product=dipeptidase PepE;protein_id=WP_000421776.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 14865 14966 . + . ID=gene-SO06_RS18880;Name=SO06_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18880 NZ_MYDG01000018.1 Protein Homology CDS 14865 14966 . + 0 ID=cds-WP_001541281.1;Parent=gene-SO06_RS18880;Dbxref=GenBank:WP_001541281.1;Name=WP_001541281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=SO06_RS18880;product=hypothetical protein;protein_id=WP_001541281.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 15001 15540 . + . ID=gene-SO06_RS18885;Name=SO06_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18885 NZ_MYDG01000018.1 Protein Homology CDS 15001 15540 . + 0 ID=cds-WP_023138099.1;Parent=gene-SO06_RS18885;Dbxref=GenBank:WP_023138099.1;Name=WP_023138099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=SO06_RS18885;product=DUF2058 domain-containing protein;protein_id=WP_023138099.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 15587 16456 . + . ID=gene-SO06_RS18890;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=SO06_RS18890 NZ_MYDG01000018.1 Protein Homology CDS 15587 16456 . + 0 ID=cds-WP_000954610.1;Parent=gene-SO06_RS18890;Dbxref=GenBank:WP_000954610.1;Name=WP_000954610.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=SO06_RS18890;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000954610.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 16453 16725 . - . ID=gene-SO06_RS18895;Name=SO06_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18895 NZ_MYDG01000018.1 Protein Homology CDS 16453 16725 . - 0 ID=cds-WP_001207628.1;Parent=gene-SO06_RS18895;Dbxref=GenBank:WP_001207628.1;Name=WP_001207628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=SO06_RS18895;product=DUF3811 domain-containing protein;protein_id=WP_001207628.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 16823 17764 . - . ID=gene-SO06_RS18900;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=SO06_RS18900 NZ_MYDG01000018.1 Protein Homology CDS 16823 17764 . - 0 ID=cds-WP_023232407.1;Parent=gene-SO06_RS18900;Dbxref=GenBank:WP_023232407.1;Name=WP_023232407.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463060.1;locus_tag=SO06_RS18900;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_023232407.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 18026 18754 . - . ID=gene-SO06_RS18905;Name=SO06_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18905 NZ_MYDG01000018.1 Protein Homology CDS 18026 18754 . - 0 ID=cds-WP_000587738.1;Parent=gene-SO06_RS18905;Dbxref=GenBank:WP_000587738.1;Name=WP_000587738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=SO06_RS18905;product=hypothetical protein;protein_id=WP_000587738.1;transl_table=11 NZ_MYDG01000018.1 RefSeq pseudogene 18951 19241 . - . ID=gene-SO06_RS18910;Name=SO06_RS18910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS18910;pseudo=true NZ_MYDG01000018.1 Protein Homology CDS 18951 19241 . - 0 ID=cds-SO06_RS18910;Parent=gene-SO06_RS18910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=SO06_RS18910;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 19493 19948 . - . ID=gene-SO06_RS18915;Name=SO06_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18915 NZ_MYDG01000018.1 Protein Homology CDS 19493 19948 . - 0 ID=cds-WP_023232409.1;Parent=gene-SO06_RS18915;Dbxref=GenBank:WP_023232409.1;Name=WP_023232409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463063.1;locus_tag=SO06_RS18915;product=hypothetical protein;protein_id=WP_023232409.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 19945 20550 . - . ID=gene-SO06_RS18920;Name=SO06_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18920 NZ_MYDG01000018.1 Protein Homology CDS 19945 20550 . - 0 ID=cds-WP_031619505.1;Parent=gene-SO06_RS18920;Dbxref=GenBank:WP_031619505.1;Name=WP_031619505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463064.1;locus_tag=SO06_RS18920;product=DUF4376 domain-containing protein;protein_id=WP_031619505.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 20555 22300 . - . ID=gene-SO06_RS18925;Name=SO06_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18925 NZ_MYDG01000018.1 Protein Homology CDS 20555 22300 . - 0 ID=cds-WP_023232411.1;Parent=gene-SO06_RS18925;Dbxref=GenBank:WP_023232411.1;Name=WP_023232411.1;Ontology_term=GO:0019062,GO:0046718;gbkey=CDS;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463065.1;locus_tag=SO06_RS18925;product=phage tail protein;protein_id=WP_023232411.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 22303 22935 . - . ID=gene-SO06_RS18930;Name=SO06_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18930 NZ_MYDG01000018.1 Protein Homology CDS 22303 22935 . - 0 ID=cds-WP_023232412.1;Parent=gene-SO06_RS18930;Dbxref=GenBank:WP_023232412.1;Name=WP_023232412.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463066.1;locus_tag=SO06_RS18930;product=phage tail protein I;protein_id=WP_023232412.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 22928 24043 . - . ID=gene-SO06_RS18935;Name=SO06_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18935 NZ_MYDG01000018.1 Protein Homology CDS 22928 24043 . - 0 ID=cds-WP_000951734.1;Parent=gene-SO06_RS18935;Dbxref=GenBank:WP_000951734.1;Name=WP_000951734.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463067.1;locus_tag=SO06_RS18935;product=baseplate assembly protein;protein_id=WP_000951734.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 24034 24393 . - . ID=gene-SO06_RS18940;Name=SO06_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18940 NZ_MYDG01000018.1 Protein Homology CDS 24034 24393 . - 0 ID=cds-WP_001093501.1;Parent=gene-SO06_RS18940;Dbxref=GenBank:WP_001093501.1;Name=WP_001093501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463068.1;locus_tag=SO06_RS18940;product=GPW/gp25 family protein;protein_id=WP_001093501.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 24557 26104 . - . ID=gene-SO06_RS18945;Name=SO06_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18945 NZ_MYDG01000018.1 Protein Homology CDS 24557 26104 . - 0 ID=cds-WP_000632048.1;Parent=gene-SO06_RS18945;Dbxref=GenBank:WP_000632048.1;Name=WP_000632048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463069.1;locus_tag=SO06_RS18945;product=DUF6056 family protein;protein_id=WP_000632048.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 26104 27033 . - . ID=gene-SO06_RS18950;Name=SO06_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18950 NZ_MYDG01000018.1 Protein Homology CDS 26104 27033 . - 0 ID=cds-WP_023138093.1;Parent=gene-SO06_RS18950;Dbxref=GenBank:WP_023138093.1;Name=WP_023138093.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463070.1;locus_tag=SO06_RS18950;product=glycosyltransferase family 2 protein;protein_id=WP_023138093.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 27030 27392 . - . ID=gene-SO06_RS18955;Name=SO06_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18955 NZ_MYDG01000018.1 Protein Homology CDS 27030 27392 . - 0 ID=cds-WP_000593182.1;Parent=gene-SO06_RS18955;Dbxref=GenBank:WP_000593182.1;Name=WP_000593182.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463071.1;locus_tag=SO06_RS18955;product=GtrA family protein;protein_id=WP_000593182.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 27719 28441 . - . ID=gene-SO06_RS18965;Name=SO06_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18965 NZ_MYDG01000018.1 Protein Homology CDS 27719 28441 . - 0 ID=cds-WP_023232414.1;Parent=gene-SO06_RS18965;Dbxref=GenBank:WP_023232414.1;Name=WP_023232414.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463072.1;locus_tag=SO06_RS18965;product=phage baseplate assembly protein V;protein_id=WP_023232414.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 28451 29494 . - . ID=gene-SO06_RS18970;Name=SO06_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18970 NZ_MYDG01000018.1 Protein Homology CDS 28451 29494 . - 0 ID=cds-WP_048349019.1;Parent=gene-SO06_RS18970;Dbxref=GenBank:WP_048349019.1;Name=WP_048349019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463073.1;locus_tag=SO06_RS18970;product=phage late control D family protein;protein_id=WP_048349019.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 29482 29691 . - . ID=gene-SO06_RS18975;Name=SO06_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18975 NZ_MYDG01000018.1 Protein Homology CDS 29482 29691 . - 0 ID=cds-WP_001269717.1;Parent=gene-SO06_RS18975;Dbxref=GenBank:WP_001269717.1;Name=WP_001269717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463074.1;locus_tag=SO06_RS18975;product=tail protein X;protein_id=WP_001269717.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 29691 30644 . - . ID=gene-SO06_RS18980;Name=SO06_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18980 NZ_MYDG01000018.1 Protein Homology CDS 29691 30644 . - 0 ID=cds-WP_023232175.1;Parent=gene-SO06_RS18980;Dbxref=GenBank:WP_023232175.1;Name=WP_023232175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463075.1;locus_tag=SO06_RS18980;product=phage tail protein;protein_id=WP_023232175.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 30644 32998 . - . ID=gene-SO06_RS18985;Name=SO06_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18985 NZ_MYDG01000018.1 Protein Homology CDS 30644 32998 . - 0 ID=cds-WP_023232174.1;Parent=gene-SO06_RS18985;Dbxref=GenBank:WP_023232174.1;Name=WP_023232174.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=SO06_RS18985;product=phage tail tape measure protein;protein_id=WP_023232174.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 33095 33223 . - . ID=gene-SO06_RS25715;Name=SO06_RS25715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25715 NZ_MYDG01000018.1 Protein Homology CDS 33095 33223 . - 0 ID=cds-WP_001185655.1;Parent=gene-SO06_RS25715;Dbxref=GenBank:WP_001185655.1;Name=WP_001185655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728452.1;locus_tag=SO06_RS25715;product=GpE family phage tail protein;protein_id=WP_001185655.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 33183 33500 . - . ID=gene-SO06_RS18995;Name=SO06_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS18995 NZ_MYDG01000018.1 Protein Homology CDS 33183 33500 . - 0 ID=cds-WP_001003641.1;Parent=gene-SO06_RS18995;Dbxref=GenBank:WP_001003641.1;Name=WP_001003641.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003637.1;locus_tag=SO06_RS18995;product=phage tail assembly protein;protein_id=WP_001003641.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 33552 34076 . - . ID=gene-SO06_RS19000;Name=SO06_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19000 NZ_MYDG01000018.1 Protein Homology CDS 33552 34076 . - 0 ID=cds-WP_000907495.1;Parent=gene-SO06_RS19000;Dbxref=GenBank:WP_000907495.1;Name=WP_000907495.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463077.1;locus_tag=SO06_RS19000;product=phage major tail tube protein;protein_id=WP_000907495.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 34076 35503 . - . ID=gene-SO06_RS19005;Name=SO06_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19005 NZ_MYDG01000018.1 Protein Homology CDS 34076 35503 . - 0 ID=cds-WP_000729848.1;Parent=gene-SO06_RS19005;Dbxref=GenBank:WP_000729848.1;Name=WP_000729848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463078.1;locus_tag=SO06_RS19005;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_000729848.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 35493 35690 . - . ID=gene-SO06_RS19010;Name=SO06_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19010 NZ_MYDG01000018.1 Protein Homology CDS 35493 35690 . - 0 ID=cds-WP_000875314.1;Parent=gene-SO06_RS19010;Dbxref=GenBank:WP_000875314.1;Name=WP_000875314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463079.1;locus_tag=SO06_RS19010;product=hypothetical protein;protein_id=WP_000875314.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 35687 36142 . - . ID=gene-SO06_RS19015;Name=SO06_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19015 NZ_MYDG01000018.1 Protein Homology CDS 35687 36142 . - 0 ID=cds-WP_000449433.1;Parent=gene-SO06_RS19015;Dbxref=GenBank:WP_000449433.1;Name=WP_000449433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463080.1;locus_tag=SO06_RS19015;product=Gp37 family protein;protein_id=WP_000449433.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 36302 36616 . - . ID=gene-SO06_RS19020;Name=SO06_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19020 NZ_MYDG01000018.1 Protein Homology CDS 36302 36616 . - 0 ID=cds-WP_000777266.1;Parent=gene-SO06_RS19020;Dbxref=GenBank:WP_000777266.1;Name=WP_000777266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463081.1;locus_tag=SO06_RS19020;product=membrane protein;protein_id=WP_000777266.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 36629 37234 . - . ID=gene-SO06_RS19025;Name=SO06_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19025 NZ_MYDG01000018.1 Protein Homology CDS 36629 37234 . - 0 ID=cds-WP_023232173.1;Parent=gene-SO06_RS19025;Dbxref=GenBank:WP_023232173.1;Name=WP_023232173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463082.1;locus_tag=SO06_RS19025;product=lytic transglycosylase domain-containing protein;protein_id=WP_023232173.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 37237 37524 . - . ID=gene-SO06_RS19030;Name=SO06_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19030 NZ_MYDG01000018.1 Protein Homology CDS 37237 37524 . - 0 ID=cds-WP_001226439.1;Parent=gene-SO06_RS19030;Dbxref=GenBank:WP_001226439.1;Name=WP_001226439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463083.1;locus_tag=SO06_RS19030;product=putative holin;protein_id=WP_001226439.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 38101 38448 . + . ID=gene-SO06_RS19035;Name=SO06_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19035 NZ_MYDG01000018.1 Protein Homology CDS 38101 38448 . + 0 ID=cds-WP_000615248.1;Parent=gene-SO06_RS19035;Dbxref=GenBank:WP_000615248.1;Name=WP_000615248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=SO06_RS19035;product=Mor transcription activator family protein;protein_id=WP_000615248.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 38579 39928 . - . ID=gene-SO06_RS19040;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=SO06_RS19040 NZ_MYDG01000018.1 Protein Homology CDS 38579 39928 . - 0 ID=cds-WP_000136394.1;Parent=gene-SO06_RS19040;Dbxref=GenBank:WP_000136394.1;Name=WP_000136394.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=SO06_RS19040;product=lysine-sensitive aspartokinase 3;protein_id=WP_000136394.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 40317 41966 . + . ID=gene-SO06_RS19045;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=SO06_RS19045 NZ_MYDG01000018.1 Protein Homology CDS 40317 41966 . + 0 ID=cds-WP_000790028.1;Parent=gene-SO06_RS19045;Dbxref=GenBank:WP_000790028.1;Name=WP_000790028.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=SO06_RS19045;product=glucose-6-phosphate isomerase;protein_id=WP_000790028.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 42410 42652 . + . ID=gene-SO06_RS19050;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=SO06_RS19050 NZ_MYDG01000018.1 Protein Homology CDS 42410 42652 . + 0 ID=cds-WP_001541297.1;Parent=gene-SO06_RS19050;Dbxref=GenBank:WP_001541297.1;Name=WP_001541297.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=SO06_RS19050;product=exopolysaccharide production protein YjbE;protein_id=WP_001541297.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 42716 43354 . + . ID=gene-SO06_RS19055;Name=SO06_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19055 NZ_MYDG01000018.1 Protein Homology CDS 42716 43354 . + 0 ID=cds-WP_080204273.1;Parent=gene-SO06_RS19055;Dbxref=GenBank:WP_080204273.1;Name=WP_080204273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=SO06_RS19055;product=YjbF family lipoprotein;protein_id=WP_080204273.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 43351 44088 . + . ID=gene-SO06_RS19060;Name=SO06_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19060 NZ_MYDG01000018.1 Protein Homology CDS 43351 44088 . + 0 ID=cds-WP_023216234.1;Parent=gene-SO06_RS19060;Dbxref=GenBank:WP_023216234.1;Name=WP_023216234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=SO06_RS19060;product=capsule biosynthesis GfcC family protein;protein_id=WP_023216234.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 44088 46184 . + . ID=gene-SO06_RS19065;Name=SO06_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19065 NZ_MYDG01000018.1 Protein Homology CDS 44088 46184 . + 0 ID=cds-WP_080204274.1;Parent=gene-SO06_RS19065;Dbxref=GenBank:WP_080204274.1;Name=WP_080204274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=SO06_RS19065;product=YjbH domain-containing protein;protein_id=WP_080204274.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 46327 46737 . + . ID=gene-SO06_RS19070;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=SO06_RS19070 NZ_MYDG01000018.1 Protein Homology CDS 46327 46737 . + 0 ID=cds-WP_000982752.1;Parent=gene-SO06_RS19070;Dbxref=GenBank:WP_000982752.1;Name=WP_000982752.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=SO06_RS19070;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982752.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 46903 47793 . - . ID=gene-SO06_RS19075;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=SO06_RS19075 NZ_MYDG01000018.1 Protein Homology CDS 46903 47793 . - 0 ID=cds-WP_001252081.1;Parent=gene-SO06_RS19075;Dbxref=GenBank:WP_001252081.1;Name=WP_001252081.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=SO06_RS19075;product=maltose ABC transporter permease MalG;protein_id=WP_001252081.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 47808 49352 . - . ID=gene-SO06_RS19080;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=SO06_RS19080 NZ_MYDG01000018.1 Protein Homology CDS 47808 49352 . - 0 ID=cds-WP_000382573.1;Parent=gene-SO06_RS19080;Dbxref=GenBank:WP_000382573.1;Name=WP_000382573.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=SO06_RS19080;product=maltose ABC transporter permease MalF;protein_id=WP_000382573.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 49484 50674 . - . ID=gene-SO06_RS19085;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=SO06_RS19085 NZ_MYDG01000018.1 Protein Homology CDS 49484 50674 . - 0 ID=cds-WP_000695415.1;Parent=gene-SO06_RS19085;Dbxref=GenBank:WP_000695415.1;Name=WP_000695415.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=SO06_RS19085;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695415.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 51036 52145 . + . ID=gene-SO06_RS19090;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=SO06_RS19090 NZ_MYDG01000018.1 Protein Homology CDS 51036 52145 . + 0 ID=cds-WP_000179176.1;Parent=gene-SO06_RS19090;Dbxref=GenBank:WP_000179176.1;Name=WP_000179176.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=SO06_RS19090;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179176.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 52234 53592 . + . ID=gene-SO06_RS19095;Name=SO06_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19095 NZ_MYDG01000018.1 Protein Homology CDS 52234 53592 . + 0 ID=cds-WP_023232172.1;Parent=gene-SO06_RS19095;Dbxref=GenBank:WP_023232172.1;Name=WP_023232172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=SO06_RS19095;product=maltoporin;protein_id=WP_023232172.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 53756 54673 . + . ID=gene-SO06_RS19100;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=SO06_RS19100 NZ_MYDG01000018.1 Protein Homology CDS 53756 54673 . + 0 ID=cds-WP_000782497.1;Parent=gene-SO06_RS19100;Dbxref=GenBank:WP_000782497.1;Name=WP_000782497.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=SO06_RS19100;product=maltose operon protein MalM;protein_id=WP_000782497.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 54854 55351 . + . ID=gene-SO06_RS19105;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=SO06_RS19105 NZ_MYDG01000018.1 Protein Homology CDS 54854 55351 . + 0 ID=cds-WP_000019230.1;Parent=gene-SO06_RS19105;Dbxref=GenBank:WP_000019230.1;Name=WP_000019230.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=SO06_RS19105;product=chorismate lyase;protein_id=WP_000019230.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 55365 56237 . + . ID=gene-SO06_RS19110;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=SO06_RS19110 NZ_MYDG01000018.1 Protein Homology CDS 55365 56237 . + 0 ID=cds-WP_000455249.1;Parent=gene-SO06_RS19110;Dbxref=GenBank:WP_000455249.1;Name=WP_000455249.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=SO06_RS19110;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455249.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 56336 58756 . - . ID=gene-SO06_RS19115;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=SO06_RS19115 NZ_MYDG01000018.1 Protein Homology CDS 56336 58756 . - 0 ID=cds-WP_000017360.1;Parent=gene-SO06_RS19115;Dbxref=GenBank:WP_000017360.1;Name=WP_000017360.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=SO06_RS19115;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017360.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 58927 59295 . + . ID=gene-SO06_RS19120;Name=SO06_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19120 NZ_MYDG01000018.1 Protein Homology CDS 58927 59295 . + 0 ID=cds-WP_000002900.1;Parent=gene-SO06_RS19120;Dbxref=GenBank:WP_000002900.1;Name=WP_000002900.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=SO06_RS19120;product=diacylglycerol kinase;protein_id=WP_000002900.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 59404 60012 . + . ID=gene-SO06_RS19125;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=SO06_RS19125 NZ_MYDG01000018.1 Protein Homology CDS 59404 60012 . + 0 ID=cds-WP_000646079.1;Parent=gene-SO06_RS19125;Dbxref=GenBank:WP_000646079.1;Name=WP_000646079.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=SO06_RS19125;product=transcriptional repressor LexA;protein_id=WP_000646079.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 60191 61516 . + . ID=gene-SO06_RS19130;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=SO06_RS19130 NZ_MYDG01000018.1 Protein Homology CDS 60191 61516 . + 0 ID=cds-WP_001128112.1;Parent=gene-SO06_RS19130;Dbxref=GenBank:WP_001128112.1;Name=WP_001128112.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=SO06_RS19130;product=MATE family efflux transporter DinF;protein_id=WP_001128112.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 61513 61626 . + . ID=gene-SO06_RS19135;Name=SO06_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19135 NZ_MYDG01000018.1 Protein Homology CDS 61513 61626 . + 0 ID=cds-WP_001575282.1;Parent=gene-SO06_RS19135;Dbxref=GenBank:WP_001575282.1;Name=WP_001575282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=SO06_RS19135;product=hypothetical protein;protein_id=WP_001575282.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 61648 61857 . + . ID=gene-SO06_RS19140;Name=SO06_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19140 NZ_MYDG01000018.1 Protein Homology CDS 61648 61857 . + 0 ID=cds-WP_001030592.1;Parent=gene-SO06_RS19140;Dbxref=GenBank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=SO06_RS19140;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 61957 62472 . - . ID=gene-SO06_RS19145;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=SO06_RS19145 NZ_MYDG01000018.1 Protein Homology CDS 61957 62472 . - 0 ID=cds-WP_023231879.1;Parent=gene-SO06_RS19145;Dbxref=GenBank:WP_023231879.1;Name=WP_023231879.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=SO06_RS19145;product=zinc uptake transcriptional repressor Zur;protein_id=WP_023231879.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 62719 64029 . + . ID=gene-SO06_RS19150;Name=SO06_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19150 NZ_MYDG01000018.1 Protein Homology CDS 62719 64029 . + 0 ID=cds-WP_001039335.1;Parent=gene-SO06_RS19150;Dbxref=GenBank:WP_001039335.1;Name=WP_001039335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=SO06_RS19150;product=conjugal transfer protein TraF;protein_id=WP_001039335.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 64117 65115 . + . ID=gene-SO06_RS19155;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=SO06_RS19155 NZ_MYDG01000018.1 Protein Homology CDS 64117 65115 . + 0 ID=cds-WP_001825318.1;Parent=gene-SO06_RS19155;Dbxref=GenBank:WP_001825318.1;Name=WP_001825318.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=SO06_RS19155;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001825318.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 65283 65525 . + . ID=gene-SO06_RS19160;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=SO06_RS19160 NZ_MYDG01000018.1 Protein Homology CDS 65283 65525 . + 0 ID=cds-WP_000891414.1;Parent=gene-SO06_RS19160;Dbxref=GenBank:WP_000891414.1;Name=WP_000891414.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=SO06_RS19160;product=envelope stress response protein PspG;protein_id=WP_000891414.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 65700 66683 . - . ID=gene-SO06_RS19165;Name=SO06_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19165 NZ_MYDG01000018.1 Protein Homology CDS 65700 66683 . - 0 ID=cds-WP_000235555.1;Parent=gene-SO06_RS19165;Dbxref=GenBank:WP_000235555.1;Name=WP_000235555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=SO06_RS19165;product=quinone oxidoreductase;protein_id=WP_000235555.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 66748 68163 . + . ID=gene-SO06_RS19170;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=SO06_RS19170 NZ_MYDG01000018.1 Protein Homology CDS 66748 68163 . + 0 ID=cds-WP_000918353.1;Parent=gene-SO06_RS19170;Dbxref=GenBank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=SO06_RS19170;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 68195 69274 . + . ID=gene-SO06_RS19175;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=SO06_RS19175 NZ_MYDG01000018.1 Protein Homology CDS 68195 69274 . + 0 ID=cds-WP_001147296.1;Parent=gene-SO06_RS19175;Dbxref=GenBank:WP_001147296.1;Name=WP_001147296.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=SO06_RS19175;product=alanine racemase;protein_id=WP_001147296.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 69460 70653 . + . ID=gene-SO06_RS19185;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=SO06_RS19185 NZ_MYDG01000018.1 Protein Homology CDS 69460 70653 . + 0 ID=cds-WP_023231878.1;Parent=gene-SO06_RS19185;Dbxref=GenBank:WP_023231878.1;Name=WP_023231878.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=SO06_RS19185;product=aromatic amino acid transaminase;protein_id=WP_023231878.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 70840 71553 . + . ID=gene-SO06_RS19190;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=SO06_RS19190 NZ_MYDG01000018.1 Protein Homology CDS 70840 71553 . + 0 ID=cds-WP_000724435.1;Parent=gene-SO06_RS19190;Dbxref=GenBank:WP_000724435.1;Name=WP_000724435.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=SO06_RS19190;product=acid phosphatase AphA;protein_id=WP_000724435.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 71682 72098 . + . ID=gene-SO06_RS19195;Name=SO06_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19195 NZ_MYDG01000018.1 Protein Homology CDS 71682 72098 . + 0 ID=cds-WP_000270392.1;Parent=gene-SO06_RS19195;Dbxref=GenBank:WP_000270392.1;Name=WP_000270392.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=SO06_RS19195;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270392.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 72101 72457 . + . ID=gene-SO06_RS19200;Name=SO06_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19200 NZ_MYDG01000018.1 Protein Homology CDS 72101 72457 . + 0 ID=cds-WP_000155665.1;Parent=gene-SO06_RS19200;Dbxref=GenBank:WP_000155665.1;Name=WP_000155665.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=SO06_RS19200;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155665.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 72458 72796 . - . ID=gene-SO06_RS19205;Name=SO06_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19205 NZ_MYDG01000018.1 Protein Homology CDS 72458 72796 . - 0 ID=cds-WP_000146588.1;Parent=gene-SO06_RS19205;Dbxref=GenBank:WP_000146588.1;Name=WP_000146588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=SO06_RS19205;product=hypothetical protein;protein_id=WP_000146588.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 72783 73238 . - . ID=gene-SO06_RS19210;Name=SO06_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19210 NZ_MYDG01000018.1 Protein Homology CDS 72783 73238 . - 0 ID=cds-WP_000432194.1;Parent=gene-SO06_RS19210;Dbxref=GenBank:WP_000432194.1;Name=WP_000432194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=SO06_RS19210;product=hypothetical protein;protein_id=WP_000432194.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 73370 76195 . - . ID=gene-SO06_RS19215;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=SO06_RS19215 NZ_MYDG01000018.1 Protein Homology CDS 73370 76195 . - 0 ID=cds-WP_000357725.1;Parent=gene-SO06_RS19215;Dbxref=GenBank:WP_000357725.1;Name=WP_000357725.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=SO06_RS19215;product=excinuclease ABC subunit UvrA;protein_id=WP_000357725.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 76443 76973 . + . ID=gene-SO06_RS19225;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=SO06_RS19225 NZ_MYDG01000018.1 Protein Homology CDS 76443 76973 . + 0 ID=cds-WP_000168322.1;Parent=gene-SO06_RS19225;Dbxref=GenBank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=SO06_RS19225;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 78012 78644 . + . ID=gene-SO06_RS19235;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=SO06_RS19235 NZ_MYDG01000018.1 Protein Homology CDS 78012 78644 . + 0 ID=cds-WP_000389243.1;Parent=gene-SO06_RS19235;Dbxref=GenBank:WP_000389243.1;Name=WP_000389243.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=SO06_RS19235;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_000389243.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 78641 80029 . + . ID=gene-SO06_RS19240;Name=SO06_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19240 NZ_MYDG01000018.1 Protein Homology CDS 78641 80029 . + 0 ID=cds-WP_023231877.1;Parent=gene-SO06_RS19240;Dbxref=GenBank:WP_023231877.1;Name=WP_023231877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=SO06_RS19240;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_023231877.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 80019 81338 . + . ID=gene-SO06_RS19245;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=SO06_RS19245 NZ_MYDG01000018.1 Protein Homology CDS 80019 81338 . + 0 ID=cds-WP_001747443.1;Parent=gene-SO06_RS19245;Dbxref=GenBank:WP_001747443.1;Name=WP_001747443.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=SO06_RS19245;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_001747443.1;transl_table=11 NZ_MYDG01000018.1 RefSeq gene 81335 82612 . + . ID=gene-SO06_RS19250;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=SO06_RS19250 NZ_MYDG01000018.1 Protein Homology CDS 81335 82612 . + 0 ID=cds-WP_001081935.1;Parent=gene-SO06_RS19250;Dbxref=GenBank:WP_001081935.1;Name=WP_001081935.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=SO06_RS19250;product=SPI-4 type I secretion system protein SiiD;protein_id=WP_001081935.1;transl_table=11 NZ_MYDG01000018.1 RefSeq pseudogene 82629 88921 . + . ID=gene-SO06_RS19255;Name=siiE;end_range=88921,.;gbkey=Gene;gene=siiE;gene_biotype=pseudogene;locus_tag=SO06_RS19255;partial=true;pseudo=true NZ_MYDG01000018.1 Protein Homology CDS 82629 88921 . + 0 ID=cds-SO06_RS19255;Parent=gene-SO06_RS19255;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=88921,.;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=SO06_RS19255;partial=true;product=non-fimbrial adhesin SiiE;pseudo=true;transl_table=11 ##sequence-region NZ_MYDG01000019.1 1 82400 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000019.1 RefSeq region 1 82400 . + . ID=NZ_MYDG01000019.1:1..82400;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000019.1 RefSeq gene 175 1482 . - . ID=gene-SO06_RS19260;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=SO06_RS19260 NZ_MYDG01000019.1 Protein Homology CDS 175 1482 . - 0 ID=cds-WP_001518618.1;Parent=gene-SO06_RS19260;Dbxref=GenBank:WP_001518618.1;Name=WP_001518618.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=SO06_RS19260;product=long-chain fatty acid transporter FadL;protein_id=WP_001518618.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 1853 2137 . + . ID=gene-SO06_RS19265;Name=SO06_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19265 NZ_MYDG01000019.1 Protein Homology CDS 1853 2137 . + 0 ID=cds-WP_000030904.1;Parent=gene-SO06_RS19265;Dbxref=GenBank:WP_000030904.1;Name=WP_000030904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=SO06_RS19265;product=YfcZ/YiiS family protein;protein_id=WP_000030904.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 2315 3625 . + . ID=gene-SO06_RS19270;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=SO06_RS19270 NZ_MYDG01000019.1 Protein Homology CDS 2315 3625 . + 0 ID=cds-WP_001248116.1;Parent=gene-SO06_RS19270;Dbxref=GenBank:WP_001248116.1;Name=WP_001248116.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=SO06_RS19270;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_001248116.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 3625 5772 . + . ID=gene-SO06_RS19275;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=SO06_RS19275 NZ_MYDG01000019.1 Protein Homology CDS 3625 5772 . + 0 ID=cds-WP_000214145.1;Parent=gene-SO06_RS19275;Dbxref=GenBank:WP_000214145.1;Name=WP_000214145.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=SO06_RS19275;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_000214145.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 5981 6466 . + . ID=gene-SO06_RS19280;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=SO06_RS19280 NZ_MYDG01000019.1 Protein Homology CDS 5981 6466 . + 0 ID=cds-WP_001195801.1;Parent=gene-SO06_RS19280;Dbxref=GenBank:WP_001195801.1;Name=WP_001195801.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=SO06_RS19280;product=phosphohistidine phosphatase SixA;protein_id=WP_001195801.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 6566 7117 . - . ID=gene-SO06_RS19285;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=SO06_RS19285 NZ_MYDG01000019.1 Protein Homology CDS 6566 7117 . - 0 ID=cds-WP_000730794.1;Parent=gene-SO06_RS19285;Dbxref=GenBank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=SO06_RS19285;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 7283 8215 . + . ID=gene-SO06_RS19290;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=SO06_RS19290 NZ_MYDG01000019.1 Protein Homology CDS 7283 8215 . + 0 ID=cds-WP_001542329.1;Parent=gene-SO06_RS19290;Dbxref=GenBank:WP_001542329.1;Name=WP_001542329.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=SO06_RS19290;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 8251 9336 . + . ID=gene-SO06_RS19295;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=SO06_RS19295 NZ_MYDG01000019.1 Protein Homology CDS 8251 9336 . + 0 ID=cds-WP_000918457.1;Parent=gene-SO06_RS19295;Dbxref=GenBank:WP_000918457.1;Name=WP_000918457.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=SO06_RS19295;product=chorismate synthase;protein_id=WP_000918457.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 9340 10164 . + . ID=gene-SO06_RS19300;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=SO06_RS19300 NZ_MYDG01000019.1 Protein Homology CDS 9340 10164 . + 0 ID=cds-WP_023232282.1;Parent=gene-SO06_RS19300;Dbxref=GenBank:WP_023232282.1;Name=WP_023232282.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=SO06_RS19300;product=penicillin-insensitive murein endopeptidase;protein_id=WP_023232282.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 10164 10973 . + . ID=gene-SO06_RS19305;Name=SO06_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19305 NZ_MYDG01000019.1 Protein Homology CDS 10164 10973 . + 0 ID=cds-WP_000368599.1;Parent=gene-SO06_RS19305;Dbxref=GenBank:WP_000368599.1;Name=WP_000368599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=SO06_RS19305;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000368599.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 10973 11521 . + . ID=gene-SO06_RS19310;Name=SO06_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19310 NZ_MYDG01000019.1 Protein Homology CDS 10973 11521 . + 0 ID=cds-WP_001066345.1;Parent=gene-SO06_RS19310;Dbxref=GenBank:WP_001066345.1;Name=WP_001066345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=SO06_RS19310;product=elongation factor P hydroxylase;protein_id=WP_001066345.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 11554 11829 . + . ID=gene-SO06_RS19315;Name=SO06_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19315 NZ_MYDG01000019.1 Protein Homology CDS 11554 11829 . + 0 ID=cds-WP_000559749.1;Parent=gene-SO06_RS19315;Dbxref=GenBank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=SO06_RS19315;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 11877 13877 . - . ID=gene-SO06_RS19320;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=SO06_RS19320 NZ_MYDG01000019.1 Protein Homology CDS 11877 13877 . - 0 ID=cds-WP_023232281.1;Parent=gene-SO06_RS19320;Dbxref=GenBank:WP_023232281.1;Name=WP_023232281.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=SO06_RS19320;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_023232281.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 14037 15251 . + . ID=gene-SO06_RS19325;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=SO06_RS19325 NZ_MYDG01000019.1 Protein Homology CDS 14037 15251 . + 0 ID=cds-WP_000817159.1;Parent=gene-SO06_RS19325;Dbxref=GenBank:WP_000817159.1;Name=WP_000817159.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=SO06_RS19325;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817159.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 15349 16005 . + . ID=gene-SO06_RS19330;Name=SO06_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19330 NZ_MYDG01000019.1 Protein Homology CDS 15349 16005 . + 0 ID=cds-WP_001142900.1;Parent=gene-SO06_RS19330;Dbxref=GenBank:WP_001142900.1;Name=WP_001142900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=SO06_RS19330;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001142900.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 16072 16590 . - . ID=gene-SO06_RS19335;Name=SO06_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19335 NZ_MYDG01000019.1 Protein Homology CDS 16072 16590 . - 0 ID=cds-WP_023181631.1;Parent=gene-SO06_RS19335;Dbxref=GenBank:WP_023181631.1;Name=WP_023181631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=SO06_RS19335;product=YbjP/YqhG family protein;protein_id=WP_023181631.1;transl_table=11 NZ_MYDG01000019.1 RefSeq pseudogene 16590 16907 . - . ID=gene-SO06_RS25835;Name=SO06_RS25835;end_range=16907,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25835;partial=true;pseudo=true NZ_MYDG01000019.1 Protein Homology CDS 16590 16907 . - 0 ID=cds-SO06_RS25835;Parent=gene-SO06_RS25835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=16907,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=SO06_RS25835;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000019.1 RefSeq pseudogene 16853 16984 . - . ID=gene-SO06_RS19345;Name=SO06_RS19345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS19345;partial=true;pseudo=true;start_range=.,16853 NZ_MYDG01000019.1 Protein Homology CDS 16853 16984 . - 0 ID=cds-SO06_RS19345;Parent=gene-SO06_RS19345;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=SO06_RS19345;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,16853;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 17157 17531 . + . ID=gene-SO06_RS19350;Name=SO06_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19350 NZ_MYDG01000019.1 Protein Homology CDS 17157 17531 . + 0 ID=cds-WP_001051261.1;Parent=gene-SO06_RS19350;Dbxref=GenBank:WP_001051261.1;Name=WP_001051261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=SO06_RS19350;product=hypothetical protein;protein_id=WP_001051261.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 17711 18889 . + . ID=gene-SO06_RS19355;Name=SO06_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19355 NZ_MYDG01000019.1 Protein Homology CDS 17711 18889 . + 0 ID=cds-WP_000127731.1;Parent=gene-SO06_RS19355;Dbxref=GenBank:WP_000127731.1;Name=WP_000127731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=SO06_RS19355;product=MFS transporter;protein_id=WP_000127731.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 18886 19887 . - . ID=gene-SO06_RS19360;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=SO06_RS19360 NZ_MYDG01000019.1 Protein Homology CDS 18886 19887 . - 0 ID=cds-WP_000553397.1;Parent=gene-SO06_RS19360;Dbxref=GenBank:WP_000553397.1;Name=WP_000553397.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=SO06_RS19360;product=flagella biosynthesis regulator Flk;protein_id=WP_000553397.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 19991 21127 . + . ID=gene-SO06_RS19365;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=SO06_RS19365 NZ_MYDG01000019.1 Protein Homology CDS 19991 21127 . + 0 ID=cds-WP_000699178.1;Parent=gene-SO06_RS19365;Dbxref=GenBank:WP_000699178.1;Name=WP_000699178.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=SO06_RS19365;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699178.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 21195 22208 . + . ID=gene-SO06_RS19370;Name=SO06_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19370 NZ_MYDG01000019.1 Protein Homology CDS 21195 22208 . + 0 ID=cds-WP_001289141.1;Parent=gene-SO06_RS19370;Dbxref=GenBank:WP_001289141.1;Name=WP_001289141.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=SO06_RS19370;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289141.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 22208 23020 . + . ID=gene-SO06_RS19375;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=SO06_RS19375 NZ_MYDG01000019.1 Protein Homology CDS 22208 23020 . + 0 ID=cds-WP_000016631.1;Parent=gene-SO06_RS19375;Dbxref=GenBank:WP_000016631.1;Name=WP_000016631.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=SO06_RS19375;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000016631.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 23069 23728 . + . ID=gene-SO06_RS19380;Name=SO06_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19380 NZ_MYDG01000019.1 Protein Homology CDS 23069 23728 . + 0 ID=cds-WP_000364318.1;Parent=gene-SO06_RS19380;Dbxref=GenBank:WP_000364318.1;Name=WP_000364318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=SO06_RS19380;product=DedA family protein;protein_id=WP_000364318.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 23878 24792 . + . ID=gene-SO06_RS19385;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=SO06_RS19385 NZ_MYDG01000019.1 Protein Homology CDS 23878 24792 . + 0 ID=cds-WP_000118383.1;Parent=gene-SO06_RS19385;Dbxref=GenBank:WP_000118383.1;Name=WP_000118383.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=SO06_RS19385;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118383.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 24860 26128 . + . ID=gene-SO06_RS19390;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=SO06_RS19390 NZ_MYDG01000019.1 Protein Homology CDS 24860 26128 . + 0 ID=cds-WP_000792265.1;Parent=gene-SO06_RS19390;Dbxref=GenBank:WP_000792265.1;Name=WP_000792265.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=SO06_RS19390;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000792265.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 26118 26792 . + . ID=gene-SO06_RS19395;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=SO06_RS19395 NZ_MYDG01000019.1 Protein Homology CDS 26118 26792 . + 0 ID=cds-WP_000157037.1;Parent=gene-SO06_RS19395;Dbxref=GenBank:WP_000157037.1;Name=WP_000157037.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=SO06_RS19395;product=cell division protein DedD;protein_id=WP_000157037.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 27103 27591 . + . ID=gene-SO06_RS19400;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=SO06_RS19400 NZ_MYDG01000019.1 Protein Homology CDS 27103 27591 . + 0 ID=cds-WP_000262102.1;Parent=gene-SO06_RS19400;Dbxref=GenBank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=SO06_RS19400;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 27629 29146 . + . ID=gene-SO06_RS19405;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=SO06_RS19405 NZ_MYDG01000019.1 Protein Homology CDS 27629 29146 . + 0 ID=cds-WP_000334205.1;Parent=gene-SO06_RS19405;Dbxref=GenBank:WP_000334205.1;Name=WP_000334205.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=SO06_RS19405;product=amidophosphoribosyltransferase;protein_id=WP_000334205.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 29182 30609 . - . ID=gene-SO06_RS19410;Name=SO06_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19410 NZ_MYDG01000019.1 Protein Homology CDS 29182 30609 . - 0 ID=cds-WP_000168925.1;Parent=gene-SO06_RS19410;Dbxref=GenBank:WP_000168925.1;Name=WP_000168925.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=SO06_RS19410;product=sigma-54 interaction domain-containing protein;protein_id=WP_000168925.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 30820 32217 . + . ID=gene-SO06_RS19415;Name=SO06_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19415 NZ_MYDG01000019.1 Protein Homology CDS 30820 32217 . + 0 ID=cds-WP_000132306.1;Parent=gene-SO06_RS19415;Dbxref=GenBank:WP_000132306.1;Name=WP_000132306.1;Ontology_term=GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=SO06_RS19415;product=diaminopimelate decarboxylase family protein;protein_id=WP_000132306.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 32308 33729 . + . ID=gene-SO06_RS19420;Name=SO06_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19420 NZ_MYDG01000019.1 Protein Homology CDS 32308 33729 . + 0 ID=cds-WP_000072512.1;Parent=gene-SO06_RS19420;Dbxref=GenBank:WP_000072512.1;Name=WP_000072512.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=SO06_RS19420;product=APC family permease;protein_id=WP_000072512.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 33731 34834 . + . ID=gene-SO06_RS19425;Name=SO06_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19425 NZ_MYDG01000019.1 Protein Homology CDS 33731 34834 . + 0 ID=cds-WP_000281905.1;Parent=gene-SO06_RS19425;Dbxref=GenBank:WP_000281905.1;Name=WP_000281905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=SO06_RS19425;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_000281905.1;transl_table=11 NZ_MYDG01000019.1 RefSeq pseudogene 34898 36304 . + . ID=gene-SO06_RS19430;Name=SO06_RS19430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS19430;pseudo=true NZ_MYDG01000019.1 Protein Homology CDS 34898 36304 . + 0 ID=cds-SO06_RS19430;Parent=gene-SO06_RS19430;Note=internal stop;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=SO06_RS19430;product=amino acid permease;pseudo=true;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 36331 36900 . + . ID=gene-SO06_RS19435;Name=SO06_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19435 NZ_MYDG01000019.1 Protein Homology CDS 36331 36900 . + 0 ID=cds-WP_000825680.1;Parent=gene-SO06_RS19435;Dbxref=GenBank:WP_000825680.1;Name=WP_000825680.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=SO06_RS19435;product=UbiX family flavin prenyltransferase;protein_id=WP_000825680.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 37189 37971 . + . ID=gene-SO06_RS19445;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=SO06_RS19445 NZ_MYDG01000019.1 Protein Homology CDS 37189 37971 . + 0 ID=cds-WP_000754423.1;Parent=gene-SO06_RS19445;Dbxref=GenBank:WP_000754423.1;Name=WP_000754423.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=SO06_RS19445;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000754423.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 38209 38991 . + . ID=gene-SO06_RS19450;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=SO06_RS19450 NZ_MYDG01000019.1 Protein Homology CDS 38209 38991 . + 0 ID=cds-WP_000731868.1;Parent=gene-SO06_RS19450;Dbxref=GenBank:WP_000731868.1;Name=WP_000731868.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=SO06_RS19450;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731868.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 39172 39858 . + . ID=gene-SO06_RS19455;Name=SO06_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19455 NZ_MYDG01000019.1 Protein Homology CDS 39172 39858 . + 0 ID=cds-WP_000965495.1;Parent=gene-SO06_RS19455;Dbxref=GenBank:WP_000965495.1;Name=WP_000965495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=SO06_RS19455;product=histidine ABC transporter permease HisQ;protein_id=WP_000965495.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 39855 40562 . + . ID=gene-SO06_RS19460;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=SO06_RS19460 NZ_MYDG01000019.1 Protein Homology CDS 39855 40562 . + 0 ID=cds-WP_000569771.1;Parent=gene-SO06_RS19460;Dbxref=GenBank:WP_000569771.1;Name=WP_000569771.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=SO06_RS19460;product=histidine ABC transporter permease HisM;protein_id=WP_000569771.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 40576 41349 . + . ID=gene-SO06_RS19465;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=SO06_RS19465 NZ_MYDG01000019.1 Protein Homology CDS 40576 41349 . + 0 ID=cds-WP_001293591.1;Parent=gene-SO06_RS19465;Dbxref=GenBank:WP_001293591.1;Name=WP_001293591.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=SO06_RS19465;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293591.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 41401 42294 . - . ID=gene-SO06_RS19470;Name=SO06_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19470 NZ_MYDG01000019.1 Protein Homology CDS 41401 42294 . - 0 ID=cds-WP_001166274.1;Parent=gene-SO06_RS19470;Dbxref=GenBank:WP_001166274.1;Name=WP_001166274.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=SO06_RS19470;product=TIGR01777 family oxidoreductase;protein_id=WP_001166274.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 42420 43067 . - . ID=gene-SO06_RS19475;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=SO06_RS19475 NZ_MYDG01000019.1 Protein Homology CDS 42420 43067 . - 0 ID=cds-WP_023232278.1;Parent=gene-SO06_RS19475;Dbxref=GenBank:WP_023232278.1;Name=WP_023232278.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=SO06_RS19475;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_023232278.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 43210 43854 . + . ID=gene-SO06_RS19480;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=SO06_RS19480 NZ_MYDG01000019.1 Protein Homology CDS 43210 43854 . + 0 ID=cds-WP_000043010.1;Parent=gene-SO06_RS19480;Dbxref=GenBank:WP_000043010.1;Name=WP_000043010.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=SO06_RS19480;product=glutathione transferase;protein_id=WP_000043010.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 43910 44461 . + . ID=gene-SO06_RS19485;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=SO06_RS19485 NZ_MYDG01000019.1 Protein Homology CDS 43910 44461 . + 0 ID=cds-WP_000772458.1;Parent=gene-SO06_RS19485;Dbxref=GenBank:WP_000772458.1;Name=WP_000772458.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=SO06_RS19485;product=phosphodiesterase;protein_id=WP_000772458.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 44518 45072 . + . ID=gene-SO06_RS19490;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=SO06_RS19490 NZ_MYDG01000019.1 Protein Homology CDS 44518 45072 . + 0 ID=cds-WP_000230215.1;Parent=gene-SO06_RS19490;Dbxref=GenBank:WP_000230215.1;Name=WP_000230215.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=SO06_RS19490;product=NUDIX hydrolase YfcD;protein_id=WP_000230215.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 45078 46097 . - . ID=gene-SO06_RS19495;Name=SO06_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19495 NZ_MYDG01000019.1 Protein Homology CDS 45078 46097 . - 0 ID=cds-WP_000026949.1;Parent=gene-SO06_RS19495;Dbxref=GenBank:WP_000026949.1;Name=WP_000026949.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=SO06_RS19495;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 46350 46793 . + . ID=gene-SO06_RS19505;Name=SO06_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19505 NZ_MYDG01000019.1 Protein Homology CDS 46350 46793 . + 0 ID=cds-WP_000901813.1;Parent=gene-SO06_RS19505;Dbxref=GenBank:WP_000901813.1;Name=WP_000901813.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=SO06_RS19505;product=PTS sugar transporter subunit IIA;protein_id=WP_000901813.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 46874 47146 . + . ID=gene-SO06_RS19510;Name=SO06_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19510 NZ_MYDG01000019.1 Protein Homology CDS 46874 47146 . + 0 ID=cds-WP_000699818.1;Parent=gene-SO06_RS19510;Dbxref=GenBank:WP_000699818.1;Name=WP_000699818.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=SO06_RS19510;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 47167 48558 . + . ID=gene-SO06_RS19515;Name=SO06_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19515 NZ_MYDG01000019.1 Protein Homology CDS 47167 48558 . + 0 ID=cds-WP_001518515.1;Parent=gene-SO06_RS19515;Dbxref=GenBank:WP_001518515.1;Name=WP_001518515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=SO06_RS19515;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001518515.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 48555 49385 . + . ID=gene-SO06_RS19520;Name=SO06_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19520 NZ_MYDG01000019.1 Protein Homology CDS 48555 49385 . + 0 ID=cds-WP_001103272.1;Parent=gene-SO06_RS19520;Dbxref=GenBank:WP_001103272.1;Name=WP_001103272.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=SO06_RS19520;product=transketolase;protein_id=WP_001103272.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 49378 50331 . + . ID=gene-SO06_RS19525;Name=SO06_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19525 NZ_MYDG01000019.1 Protein Homology CDS 49378 50331 . + 0 ID=cds-WP_000593026.1;Parent=gene-SO06_RS19525;Dbxref=GenBank:WP_000593026.1;Name=WP_000593026.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=SO06_RS19525;product=transketolase family protein;protein_id=WP_000593026.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 50380 51900 . - . ID=gene-SO06_RS19530;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=SO06_RS19530 NZ_MYDG01000019.1 Protein Homology CDS 50380 51900 . - 0 ID=cds-WP_000117932.1;Parent=gene-SO06_RS19530;Dbxref=GenBank:WP_000117932.1;Name=WP_000117932.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=SO06_RS19530;product=putative basic amino acid antiporter YfcC;protein_id=WP_000117932.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 52114 54258 . - . ID=gene-SO06_RS19535;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=SO06_RS19535 NZ_MYDG01000019.1 Protein Homology CDS 52114 54258 . - 0 ID=cds-WP_000086692.1;Parent=gene-SO06_RS19535;Dbxref=GenBank:WP_000086692.1;Name=WP_000086692.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=SO06_RS19535;product=phosphate acetyltransferase;protein_id=WP_000086692.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 54335 55537 . - . ID=gene-SO06_RS19540;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=SO06_RS19540 NZ_MYDG01000019.1 Protein Homology CDS 54335 55537 . - 0 ID=cds-WP_000095692.1;Parent=gene-SO06_RS19540;Dbxref=GenBank:WP_000095692.1;Name=WP_000095692.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=SO06_RS19540;product=acetate kinase;protein_id=WP_000095692.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 55877 56332 . + . ID=gene-SO06_RS19545;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=SO06_RS19545 NZ_MYDG01000019.1 Protein Homology CDS 55877 56332 . + 0 ID=cds-WP_000106617.1;Parent=gene-SO06_RS19545;Dbxref=GenBank:WP_000106617.1;Name=WP_000106617.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=SO06_RS19545;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106617.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 56415 56909 . + . ID=gene-SO06_RS19550;Name=SO06_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19550 NZ_MYDG01000019.1 Protein Homology CDS 56415 56909 . + 0 ID=cds-WP_000426135.1;Parent=gene-SO06_RS19550;Dbxref=GenBank:WP_000426135.1;Name=WP_000426135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=SO06_RS19550;product=YfbU family protein;protein_id=WP_000426135.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 56902 57579 . + . ID=gene-SO06_RS19555;Name=SO06_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19555 NZ_MYDG01000019.1 Protein Homology CDS 56902 57579 . + 0 ID=cds-WP_001555201.1;Parent=gene-SO06_RS19555;Dbxref=GenBank:WP_001555201.1;Name=WP_001555201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=SO06_RS19555;product=sugar phosphatase;protein_id=WP_001555201.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 57656 59482 . + . ID=gene-SO06_RS19560;Name=SO06_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19560 NZ_MYDG01000019.1 Protein Homology CDS 57656 59482 . + 0 ID=cds-WP_001012857.1;Parent=gene-SO06_RS19560;Dbxref=GenBank:WP_001012857.1;Name=WP_001012857.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=SO06_RS19560;product=SLC13 family permease;protein_id=WP_001012857.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 59573 60172 . - . ID=gene-SO06_RS19565;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=SO06_RS19565 NZ_MYDG01000019.1 Protein Homology CDS 59573 60172 . - 0 ID=cds-WP_000813882.1;Parent=gene-SO06_RS19565;Dbxref=GenBank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=SO06_RS19565;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 60266 61480 . - . ID=gene-SO06_RS19570;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=SO06_RS19570 NZ_MYDG01000019.1 Protein Homology CDS 60266 61480 . - 0 ID=cds-WP_000074540.1;Parent=gene-SO06_RS19570;Dbxref=GenBank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=SO06_RS19570;product=alanine transaminase AlaA;protein_id=WP_000074540.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 62412 63350 . + . ID=gene-SO06_RS19580;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=SO06_RS19580 NZ_MYDG01000019.1 Protein Homology CDS 62412 63350 . + 0 ID=cds-WP_000606288.1;Parent=gene-SO06_RS19580;Dbxref=GenBank:WP_000606288.1;Name=WP_000606288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=SO06_RS19580;product=transcriptional regulator LrhA;protein_id=WP_000606288.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 63430 63582 . + . ID=gene-SO06_RS19585;Name=SO06_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19585 NZ_MYDG01000019.1 Protein Homology CDS 63430 63582 . + 0 ID=cds-WP_001121022.1;Parent=gene-SO06_RS19585;Dbxref=GenBank:WP_001121022.1;Name=WP_001121022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=SO06_RS19585;product=STM2329 family putative cytoplasmic protein;protein_id=WP_001121022.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 63977 64420 . + . ID=gene-SO06_RS19590;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=SO06_RS19590 NZ_MYDG01000019.1 Protein Homology CDS 63977 64420 . + 0 ID=cds-WP_000062993.1;Parent=gene-SO06_RS19590;Dbxref=GenBank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=SO06_RS19590;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 64436 65098 . + . ID=gene-SO06_RS19595;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=SO06_RS19595 NZ_MYDG01000019.1 Protein Homology CDS 64436 65098 . + 0 ID=cds-WP_000386728.1;Parent=gene-SO06_RS19595;Dbxref=GenBank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=SO06_RS19595;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 65185 66987 . + . ID=gene-SO06_RS19600;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=SO06_RS19600 NZ_MYDG01000019.1 Protein Homology CDS 65185 66987 . + 0 ID=cds-WP_000247855.1;Parent=gene-SO06_RS19600;Dbxref=GenBank:WP_000247855.1;Name=WP_000247855.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=SO06_RS19600;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247855.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 66990 67490 . + . ID=gene-SO06_RS19605;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=SO06_RS19605 NZ_MYDG01000019.1 Protein Homology CDS 66990 67490 . + 0 ID=cds-WP_000545038.1;Parent=gene-SO06_RS19605;Dbxref=GenBank:WP_000545038.1;Name=WP_000545038.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=SO06_RS19605;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 67487 68824 . + . ID=gene-SO06_RS19610;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=SO06_RS19610 NZ_MYDG01000019.1 Protein Homology CDS 67487 68824 . + 0 ID=cds-WP_000800048.1;Parent=gene-SO06_RS19610;Dbxref=GenBank:WP_000800048.1;Name=WP_000800048.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=SO06_RS19610;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000800048.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 68855 71581 . + . ID=gene-SO06_RS19615;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=SO06_RS19615 NZ_MYDG01000019.1 Protein Homology CDS 68855 71581 . + 0 ID=cds-WP_001728014.1;Parent=gene-SO06_RS19615;Dbxref=GenBank:WP_001728014.1;Name=WP_001728014.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=SO06_RS19615;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_001728014.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 71578 72555 . + . ID=gene-SO06_RS19620;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=SO06_RS19620 NZ_MYDG01000019.1 Protein Homology CDS 71578 72555 . + 0 ID=cds-WP_000118515.1;Parent=gene-SO06_RS19620;Dbxref=GenBank:WP_000118515.1;Name=WP_000118515.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=SO06_RS19620;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118515.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 72570 73112 . + . ID=gene-SO06_RS19625;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=SO06_RS19625 NZ_MYDG01000019.1 Protein Homology CDS 72570 73112 . + 0 ID=cds-WP_000172747.1;Parent=gene-SO06_RS19625;Dbxref=GenBank:WP_000172747.1;Name=WP_000172747.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=SO06_RS19625;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 73123 73677 . + . ID=gene-SO06_RS19630;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=SO06_RS19630 NZ_MYDG01000019.1 Protein Homology CDS 73123 73677 . + 0 ID=cds-WP_000393522.1;Parent=gene-SO06_RS19630;Dbxref=GenBank:WP_000393522.1;Name=WP_000393522.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=SO06_RS19630;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393522.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 73674 73976 . + . ID=gene-SO06_RS19635;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=SO06_RS19635 NZ_MYDG01000019.1 Protein Homology CDS 73674 73976 . + 0 ID=cds-WP_000612687.1;Parent=gene-SO06_RS19635;Dbxref=GenBank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=SO06_RS19635;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 73973 75814 . + . ID=gene-SO06_RS19640;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=SO06_RS19640 NZ_MYDG01000019.1 Protein Homology CDS 73973 75814 . + 0 ID=cds-WP_001056582.1;Parent=gene-SO06_RS19640;Dbxref=GenBank:WP_001056582.1;Name=WP_001056582.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=SO06_RS19640;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056582.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 75891 77420 . + . ID=gene-SO06_RS19645;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=SO06_RS19645 NZ_MYDG01000019.1 Protein Homology CDS 75891 77420 . + 0 ID=cds-WP_023232196.1;Parent=gene-SO06_RS19645;Dbxref=GenBank:WP_023232196.1;Name=WP_023232196.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=SO06_RS19645;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_023232196.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 77427 78884 . + . ID=gene-SO06_RS19650;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=SO06_RS19650 NZ_MYDG01000019.1 Protein Homology CDS 77427 78884 . + 0 ID=cds-WP_000156667.1;Parent=gene-SO06_RS19650;Dbxref=GenBank:WP_000156667.1;Name=WP_000156667.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=SO06_RS19650;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156667.1;transl_table=11 NZ_MYDG01000019.1 RefSeq gene 79493 82400 . + . ID=gene-SO06_RS19655;Name=SO06_RS19655;end_range=82400,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19655;partial=true NZ_MYDG01000019.1 Protein Homology CDS 79493 82400 . + 0 ID=cds-WP_176210691.1;Parent=gene-SO06_RS19655;Dbxref=GenBank:WP_176210691.1;Name=WP_176210691.1;end_range=82400,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044774.1;locus_tag=SO06_RS19655;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_176210691.1;transl_table=11 ##sequence-region NZ_MYDG01000001.1 1 651891 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000001.1 RefSeq region 1 651891 . + . ID=NZ_MYDG01000001.1:1..651891;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000001.1 RefSeq pseudogene 1 642 . - . ID=gene-SO06_RS00005;Name=SO06_RS00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS00005;partial=true;pseudo=true;start_range=.,1 NZ_MYDG01000001.1 Protein Homology CDS 1 642 . - 0 ID=cds-SO06_RS00005;Parent=gene-SO06_RS00005;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=SO06_RS00005;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 842 1630 . - . ID=gene-SO06_RS00010;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=SO06_RS00010 NZ_MYDG01000001.1 Protein Homology CDS 842 1630 . - 0 ID=cds-WP_000506501.1;Parent=gene-SO06_RS00010;Dbxref=GenBank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=SO06_RS00010;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 1748 2041 . - . ID=gene-SO06_RS00015;Name=SO06_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00015 NZ_MYDG01000001.1 Protein Homology CDS 1748 2041 . - 0 ID=cds-WP_031608040.1;Parent=gene-SO06_RS00015;Dbxref=GenBank:WP_031608040.1;Name=WP_031608040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=SO06_RS00015;product=hypothetical protein;protein_id=WP_031608040.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 2123 2326 . - . ID=gene-SO06_RS00020;Name=SO06_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00020 NZ_MYDG01000001.1 Protein Homology CDS 2123 2326 . - 0 ID=cds-WP_080204137.1;Parent=gene-SO06_RS00020;Dbxref=GenBank:WP_080204137.1;Name=WP_080204137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518100.1;locus_tag=SO06_RS00020;product=hypothetical protein;protein_id=WP_080204137.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 2361 3734 . + . ID=gene-SO06_RS00025;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=SO06_RS00025 NZ_MYDG01000001.1 Protein Homology CDS 2361 3734 . + 0 ID=cds-WP_080204138.1;Parent=gene-SO06_RS00025;Dbxref=GenBank:WP_080204138.1;Name=WP_080204138.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=SO06_RS00025;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_080204138.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 4200 4907 . + . ID=gene-SO06_RS00030;Name=SO06_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00030 NZ_MYDG01000001.1 Protein Homology CDS 4200 4907 . + 0 ID=cds-WP_080204139.1;Parent=gene-SO06_RS00030;Dbxref=GenBank:WP_080204139.1;Name=WP_080204139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=SO06_RS00030;product=diguanylate phosphodiesterase;protein_id=WP_080204139.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 4923 5729 . - . ID=gene-SO06_RS00035;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=SO06_RS00035 NZ_MYDG01000001.1 Protein Homology CDS 4923 5729 . - 0 ID=cds-WP_000230462.1;Parent=gene-SO06_RS00035;Dbxref=GenBank:WP_000230462.1;Name=WP_000230462.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=SO06_RS00035;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230462.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 5731 6723 . - . ID=gene-SO06_RS00040;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=SO06_RS00040 NZ_MYDG01000001.1 Protein Homology CDS 5731 6723 . - 0 ID=cds-WP_001128869.1;Parent=gene-SO06_RS00040;Dbxref=GenBank:WP_001128869.1;Name=WP_001128869.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=SO06_RS00040;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128869.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 6723 7613 . - . ID=gene-SO06_RS00045;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=SO06_RS00045 NZ_MYDG01000001.1 Protein Homology CDS 6723 7613 . - 0 ID=cds-WP_001146150.1;Parent=gene-SO06_RS00045;Dbxref=GenBank:WP_001146150.1;Name=WP_001146150.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=SO06_RS00045;product=peptide ABC transporter permease SapC;protein_id=WP_001146150.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 7600 8565 . - . ID=gene-SO06_RS00050;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=SO06_RS00050 NZ_MYDG01000001.1 Protein Homology CDS 7600 8565 . - 0 ID=cds-WP_000583298.1;Parent=gene-SO06_RS00050;Dbxref=GenBank:WP_000583298.1;Name=WP_000583298.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=SO06_RS00050;product=peptide ABC transporter permease SapB;protein_id=WP_000583298.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 8562 10211 . - . ID=gene-SO06_RS00055;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=SO06_RS00055 NZ_MYDG01000001.1 Protein Homology CDS 8562 10211 . - 0 ID=cds-WP_001241628.1;Parent=gene-SO06_RS00055;Dbxref=GenBank:WP_001241628.1;Name=WP_001241628.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=SO06_RS00055;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_001241628.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 10323 11303 . - . ID=gene-SO06_RS00060;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=SO06_RS00060 NZ_MYDG01000001.1 Protein Homology CDS 10323 11303 . - 0 ID=cds-WP_000807306.1;Parent=gene-SO06_RS00060;Dbxref=GenBank:WP_000807306.1;Name=WP_000807306.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=SO06_RS00060;product=phage shock protein operon transcriptional activator;protein_id=WP_000807306.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 11474 12142 . + . ID=gene-SO06_RS00065;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=SO06_RS00065 NZ_MYDG01000001.1 Protein Homology CDS 11474 12142 . + 0 ID=cds-WP_000511006.1;Parent=gene-SO06_RS00065;Dbxref=GenBank:WP_000511006.1;Name=WP_000511006.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=SO06_RS00065;product=phage shock protein PspA;protein_id=WP_000511006.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 12202 12426 . + . ID=gene-SO06_RS00070;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=SO06_RS00070 NZ_MYDG01000001.1 Protein Homology CDS 12202 12426 . + 0 ID=cds-WP_001274953.1;Parent=gene-SO06_RS00070;Dbxref=GenBank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=SO06_RS00070;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 12426 12785 . + . ID=gene-SO06_RS00075;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=SO06_RS00075 NZ_MYDG01000001.1 Protein Homology CDS 12426 12785 . + 0 ID=cds-WP_063809285.1;Parent=gene-SO06_RS00075;Dbxref=GenBank:WP_063809285.1;Name=WP_063809285.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=SO06_RS00075;product=envelope stress response membrane protein PspC;protein_id=WP_063809285.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 12808 13026 . + . ID=gene-SO06_RS00080;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=SO06_RS00080 NZ_MYDG01000001.1 Protein Homology CDS 12808 13026 . + 0 ID=cds-WP_001097607.1;Parent=gene-SO06_RS00080;Dbxref=GenBank:WP_001097607.1;Name=WP_001097607.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=SO06_RS00080;product=phage shock protein PspD;protein_id=WP_001097607.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 13102 13416 . + . ID=gene-SO06_RS00085;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=SO06_RS00085 NZ_MYDG01000001.1 Protein Homology CDS 13102 13416 . + 0 ID=cds-WP_000913432.1;Parent=gene-SO06_RS00085;Dbxref=GenBank:WP_000913432.1;Name=WP_000913432.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=SO06_RS00085;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913432.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 13565 14962 . + . ID=gene-SO06_RS00090;Name=SO06_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00090 NZ_MYDG01000001.1 Protein Homology CDS 13565 14962 . + 0 ID=cds-WP_000825860.1;Parent=gene-SO06_RS00090;Dbxref=GenBank:WP_000825860.1;Name=WP_000825860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=SO06_RS00090;product=YcjX family protein;protein_id=WP_000825860.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 14959 16020 . + . ID=gene-SO06_RS00095;Name=SO06_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00095 NZ_MYDG01000001.1 Protein Homology CDS 14959 16020 . + 0 ID=cds-WP_080204140.1;Parent=gene-SO06_RS00095;Dbxref=GenBank:WP_080204140.1;Name=WP_080204140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=SO06_RS00095;product=YcjF family protein;protein_id=WP_080204140.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 16168 17709 . + . ID=gene-SO06_RS00100;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=SO06_RS00100 NZ_MYDG01000001.1 Protein Homology CDS 16168 17709 . + 0 ID=cds-WP_001235493.1;Parent=gene-SO06_RS00100;Dbxref=GenBank:WP_001235493.1;Name=WP_001235493.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=SO06_RS00100;product=transcriptional regulator TyrR;protein_id=WP_001235493.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 17799 18305 . - . ID=gene-SO06_RS00105;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=SO06_RS00105 NZ_MYDG01000001.1 Protein Homology CDS 17799 18305 . - 0 ID=cds-WP_000084402.1;Parent=gene-SO06_RS00105;Dbxref=GenBank:WP_000084402.1;Name=WP_000084402.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=SO06_RS00105;product=thiol peroxidase;protein_id=WP_000084402.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 18421 19386 . + . ID=gene-SO06_RS00110;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=SO06_RS00110 NZ_MYDG01000001.1 Protein Homology CDS 18421 19386 . + 0 ID=cds-WP_001258068.1;Parent=gene-SO06_RS00110;Dbxref=GenBank:WP_001258068.1;Name=WP_001258068.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=SO06_RS00110;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001258068.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 19361 20089 . - . ID=gene-SO06_RS00115;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=SO06_RS00115 NZ_MYDG01000001.1 Protein Homology CDS 19361 20089 . - 0 ID=cds-WP_000219108.1;Parent=gene-SO06_RS00115;Dbxref=GenBank:WP_000219108.1;Name=WP_000219108.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=SO06_RS00115;product=murein tripeptide amidase MpaA;protein_id=WP_000219108.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 20279 21892 . + . ID=gene-SO06_RS00120;Name=SO06_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00120 NZ_MYDG01000001.1 Protein Homology CDS 20279 21892 . + 0 ID=cds-WP_001216553.1;Parent=gene-SO06_RS00120;Dbxref=GenBank:WP_001216553.1;Name=WP_001216553.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=SO06_RS00120;product=peptide ABC transporter substrate-binding protein;protein_id=WP_001216553.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 22112 22456 . - . ID=gene-SO06_RS00125;Name=SO06_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00125 NZ_MYDG01000001.1 Protein Homology CDS 22112 22456 . - 0 ID=cds-WP_000950636.1;Parent=gene-SO06_RS00125;Dbxref=GenBank:WP_000950636.1;Name=WP_000950636.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007712977.1;locus_tag=SO06_RS00125;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000950636.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 22491 22772 . - . ID=gene-SO06_RS00130;Name=SO06_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00130 NZ_MYDG01000001.1 Protein Homology CDS 22491 22772 . - 0 ID=cds-WP_000323820.1;Parent=gene-SO06_RS00130;Dbxref=GenBank:WP_000323820.1;Name=WP_000323820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706353.1;locus_tag=SO06_RS00130;product=hypothetical protein;protein_id=WP_000323820.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 23011 23625 . - . ID=gene-SO06_RS00135;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=SO06_RS00135 NZ_MYDG01000001.1 Protein Homology CDS 23011 23625 . - 0 ID=cds-WP_000129294.1;Parent=gene-SO06_RS00135;Dbxref=GenBank:WP_000129294.1;Name=WP_000129294.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465698.1;locus_tag=SO06_RS00135;product=Tat proofreading chaperone DmsD;protein_id=WP_000129294.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 23667 24524 . - . ID=gene-SO06_RS00140;Name=SO06_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00140 NZ_MYDG01000001.1 Protein Homology CDS 23667 24524 . - 0 ID=cds-WP_023182219.1;Parent=gene-SO06_RS00140;Dbxref=GenBank:WP_023182219.1;Name=WP_023182219.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=SO06_RS00140;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_023182219.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 24526 25143 . - . ID=gene-SO06_RS00145;Name=SO06_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00145 NZ_MYDG01000001.1 Protein Homology CDS 24526 25143 . - 0 ID=cds-WP_023182218.1;Parent=gene-SO06_RS00145;Dbxref=GenBank:WP_023182218.1;Name=WP_023182218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=SO06_RS00145;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_023182218.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 25154 27583 . - . ID=gene-SO06_RS00150;Name=SO06_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00150 NZ_MYDG01000001.1 Protein Homology CDS 25154 27583 . - 0 ID=cds-WP_080204141.1;Parent=gene-SO06_RS00150;Dbxref=GenBank:WP_080204141.1;Name=WP_080204141.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805283.1;locus_tag=SO06_RS00150;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_080204141.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 27943 28866 . - . ID=gene-SO06_RS00155;Name=SO06_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00155 NZ_MYDG01000001.1 Protein Homology CDS 27943 28866 . - 0 ID=cds-WP_001257182.1;Parent=gene-SO06_RS00155;Dbxref=GenBank:WP_001257182.1;Name=WP_001257182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257182.1;locus_tag=SO06_RS00155;product=LysR substrate-binding domain-containing protein;protein_id=WP_001257182.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 29191 29970 . + . ID=gene-SO06_RS00160;Name=SO06_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00160 NZ_MYDG01000001.1 Protein Homology CDS 29191 29970 . + 0 ID=cds-WP_001649234.1;Parent=gene-SO06_RS00160;Dbxref=GenBank:WP_001649234.1;Name=WP_001649234.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=SO06_RS00160;product=AraC family transcriptional regulator;protein_id=WP_001649234.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 30216 31403 . + . ID=gene-SO06_RS00165;Name=SO06_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00165 NZ_MYDG01000001.1 Protein Homology CDS 30216 31403 . + 0 ID=cds-WP_000704980.1;Parent=gene-SO06_RS00165;Dbxref=GenBank:WP_000704980.1;Name=WP_000704980.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704980.1;locus_tag=SO06_RS00165;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000704980.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 31541 32845 . + . ID=gene-SO06_RS00170;Name=SO06_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00170 NZ_MYDG01000001.1 Protein Homology CDS 31541 32845 . + 0 ID=cds-WP_052318441.1;Parent=gene-SO06_RS00170;Dbxref=GenBank:WP_052318441.1;Name=WP_052318441.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807034.1;locus_tag=SO06_RS00170;product=aromatic amino acid transport family protein;protein_id=WP_052318441.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 33025 33801 . + . ID=gene-SO06_RS00175;Name=SO06_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00175 NZ_MYDG01000001.1 Protein Homology CDS 33025 33801 . + 0 ID=cds-WP_001727416.1;Parent=gene-SO06_RS00175;Dbxref=GenBank:WP_001727416.1;Name=WP_001727416.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007712986.1;locus_tag=SO06_RS00175;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_001727416.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 34181 35383 . + . ID=gene-SO06_RS00180;Name=SO06_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00180 NZ_MYDG01000001.1 Protein Homology CDS 34181 35383 . + 0 ID=cds-WP_023203171.1;Parent=gene-SO06_RS00180;Dbxref=GenBank:WP_023203171.1;Name=WP_023203171.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727417.1;locus_tag=SO06_RS00180;product=MFS transporter;protein_id=WP_023203171.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 35841 36770 . - . ID=gene-SO06_RS00185;Name=SO06_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00185 NZ_MYDG01000001.1 Protein Homology CDS 35841 36770 . - 0 ID=cds-WP_080204142.1;Parent=gene-SO06_RS00185;Dbxref=GenBank:WP_080204142.1;Name=WP_080204142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=SO06_RS00185;product=aromatic alcohol reductase;protein_id=WP_080204142.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 36889 37794 . + . ID=gene-SO06_RS00190;Name=SO06_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00190 NZ_MYDG01000001.1 Protein Homology CDS 36889 37794 . + 0 ID=cds-WP_080204143.1;Parent=gene-SO06_RS00190;Dbxref=GenBank:WP_080204143.1;Name=WP_080204143.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000359219.1;locus_tag=SO06_RS00190;product=LysR family transcriptional regulator;protein_id=WP_080204143.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 38070 38939 . + . ID=gene-SO06_RS00195;Name=SO06_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00195 NZ_MYDG01000001.1 Protein Homology CDS 38070 38939 . + 0 ID=cds-WP_000456775.1;Parent=gene-SO06_RS00195;Dbxref=GenBank:WP_000456775.1;Name=WP_000456775.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=SO06_RS00195;product=aldo/keto reductase;protein_id=WP_000456775.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 39030 39743 . - . ID=gene-SO06_RS00200;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=SO06_RS00200 NZ_MYDG01000001.1 Protein Homology CDS 39030 39743 . - 0 ID=cds-WP_000171957.1;Parent=gene-SO06_RS00200;Dbxref=GenBank:WP_000171957.1;Name=WP_000171957.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=SO06_RS00200;product=SDR family oxidoreductase;protein_id=WP_000171957.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 39821 40411 . + . ID=gene-SO06_RS00205;Name=SO06_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00205 NZ_MYDG01000001.1 Protein Homology CDS 39821 40411 . + 0 ID=cds-WP_000208474.1;Parent=gene-SO06_RS00205;Dbxref=GenBank:WP_000208474.1;Name=WP_000208474.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=SO06_RS00205;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208474.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 40540 40776 . + . ID=gene-SO06_RS00210;Name=SO06_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00210 NZ_MYDG01000001.1 Protein Homology CDS 40540 40776 . + 0 ID=cds-WP_001168017.1;Parent=gene-SO06_RS00210;Dbxref=GenBank:WP_001168017.1;Name=WP_001168017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=SO06_RS00210;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168017.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 40990 42099 . - . ID=gene-SO06_RS00215;Name=SO06_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00215 NZ_MYDG01000001.1 Protein Homology CDS 40990 42099 . - 0 ID=cds-WP_080204144.1;Parent=gene-SO06_RS00215;Dbxref=GenBank:WP_080204144.1;Name=WP_080204144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=SO06_RS00215;product=hypothetical protein;protein_id=WP_080204144.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 42490 43347 . - . ID=gene-SO06_RS00220;Name=SO06_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00220 NZ_MYDG01000001.1 Protein Homology CDS 42490 43347 . - 0 ID=cds-WP_077905754.1;Parent=gene-SO06_RS00220;Dbxref=GenBank:WP_077905754.1;Name=WP_077905754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=SO06_RS00220;product=GyrI-like domain-containing protein;protein_id=WP_077905754.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 43641 44486 . + . ID=gene-SO06_RS00225;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=SO06_RS00225 NZ_MYDG01000001.1 Protein Homology CDS 43641 44486 . + 0 ID=cds-WP_058805650.1;Parent=gene-SO06_RS00225;Dbxref=GenBank:WP_058805650.1;Name=WP_058805650.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=SO06_RS00225;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_058805650.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 44561 46543 . + . ID=gene-SO06_RS00230;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=SO06_RS00230 NZ_MYDG01000001.1 Protein Homology CDS 44561 46543 . + 0 ID=cds-WP_080204145.1;Parent=gene-SO06_RS00230;Dbxref=GenBank:WP_080204145.1;Name=WP_080204145.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=SO06_RS00230;product=two-partner secretion translocator ZirT;protein_id=WP_080204145.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 46564 47394 . + . ID=gene-SO06_RS00235;Name=zirS;gbkey=Gene;gene=zirS;gene_biotype=protein_coding;locus_tag=SO06_RS00235 NZ_MYDG01000001.1 Protein Homology CDS 46564 47394 . + 0 ID=cds-WP_076735601.1;Parent=gene-SO06_RS00235;Dbxref=GenBank:WP_076735601.1;Name=WP_076735601.1;gbkey=CDS;gene=zirS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460626.1;locus_tag=SO06_RS00235;product=two-partner-like secretion system exoprotein ZirS;protein_id=WP_076735601.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 47493 48050 . + . ID=gene-SO06_RS00245;Name=SO06_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00245 NZ_MYDG01000001.1 Protein Homology CDS 47493 48050 . + 0 ID=cds-WP_001062627.1;Parent=gene-SO06_RS00245;Dbxref=GenBank:WP_001062627.1;Name=WP_001062627.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=SO06_RS00245;product=redoxin family protein;protein_id=WP_001062627.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 48157 48495 . - . ID=gene-SO06_RS00250;Name=SO06_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00250 NZ_MYDG01000001.1 Protein Homology CDS 48157 48495 . - 0 ID=cds-WP_000051816.1;Parent=gene-SO06_RS00250;Dbxref=GenBank:WP_000051816.1;Name=WP_000051816.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=SO06_RS00250;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_000051816.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 48523 49209 . - . ID=gene-SO06_RS00255;Name=SO06_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00255 NZ_MYDG01000001.1 Protein Homology CDS 48523 49209 . - 0 ID=cds-WP_017441303.1;Parent=gene-SO06_RS00255;Dbxref=GenBank:WP_017441303.1;Name=WP_017441303.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=SO06_RS00255;product=B3/B4 domain-containing protein;protein_id=WP_017441303.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 49253 49855 . + . ID=gene-SO06_RS00260;Name=SO06_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00260 NZ_MYDG01000001.1 Protein Homology CDS 49253 49855 . + 0 ID=cds-WP_000163372.1;Parent=gene-SO06_RS00260;Dbxref=GenBank:WP_000163372.1;Name=WP_000163372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=SO06_RS00260;product=helix-turn-helix domain-containing protein;protein_id=WP_000163372.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 49937 50968 . - . ID=gene-SO06_RS00265;Name=SO06_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00265 NZ_MYDG01000001.1 Protein Homology CDS 49937 50968 . - 0 ID=cds-WP_000493671.1;Parent=gene-SO06_RS00265;Dbxref=GenBank:WP_000493671.1;Name=WP_000493671.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=SO06_RS00265;product=mechanosensitive ion channel family protein;protein_id=WP_000493671.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 51207 51461 . + . ID=gene-SO06_RS00270;Name=SO06_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00270 NZ_MYDG01000001.1 Protein Homology CDS 51207 51461 . + 0 ID=cds-WP_000605645.1;Parent=gene-SO06_RS00270;Dbxref=GenBank:WP_000605645.1;Name=WP_000605645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=SO06_RS00270;product=DUF2534 family protein;protein_id=WP_000605645.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 51516 52463 . - . ID=gene-SO06_RS00275;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=SO06_RS00275 NZ_MYDG01000001.1 Protein Homology CDS 51516 52463 . - 0 ID=cds-WP_001262138.1;Parent=gene-SO06_RS00275;Dbxref=GenBank:WP_001262138.1;Name=WP_001262138.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=SO06_RS00275;product=universal stress protein UspE;protein_id=WP_001262138.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 52614 53366 . - . ID=gene-SO06_RS00280;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=SO06_RS00280 NZ_MYDG01000001.1 Protein Homology CDS 52614 53366 . - 0 ID=cds-WP_000611914.1;Parent=gene-SO06_RS00280;Dbxref=GenBank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=SO06_RS00280;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 53562 54077 . - . ID=gene-SO06_RS00285;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=SO06_RS00285 NZ_MYDG01000001.1 Protein Homology CDS 53562 54077 . - 0 ID=cds-WP_000945041.1;Parent=gene-SO06_RS00285;Dbxref=GenBank:WP_000945041.1;Name=WP_000945041.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=SO06_RS00285;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945041.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 54335 54898 . + . ID=gene-SO06_RS00290;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=SO06_RS00290 NZ_MYDG01000001.1 Protein Homology CDS 54335 54898 . + 0 ID=cds-WP_001046799.1;Parent=gene-SO06_RS00290;Dbxref=GenBank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=SO06_RS00290;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 55309 56463 . + . ID=gene-SO06_RS00300;Name=SO06_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00300 NZ_MYDG01000001.1 Protein Homology CDS 55309 56463 . + 0 ID=cds-WP_079973028.1;Parent=gene-SO06_RS00300;Dbxref=GenBank:WP_079973028.1;Name=WP_079973028.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=SO06_RS00300;product=methyl-accepting chemotaxis protein;protein_id=WP_079973028.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 56609 57592 . + . ID=gene-SO06_RS00305;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=SO06_RS00305 NZ_MYDG01000001.1 Protein Homology CDS 56609 57592 . + 0 ID=cds-WP_000387373.1;Parent=gene-SO06_RS00305;Dbxref=GenBank:WP_000387373.1;Name=WP_000387373.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=SO06_RS00305;product=zinc transporter ZntB;protein_id=WP_000387373.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 57868 58050 . + . ID=gene-SO06_RS25735;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=SO06_RS25735 NZ_MYDG01000001.1 Protein Homology CDS 57868 58050 . + 0 ID=cds-WP_001670836.1;Parent=gene-SO06_RS25735;Dbxref=GenBank:WP_001670836.1;Name=WP_001670836.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_271267465.1;locus_tag=SO06_RS25735;product=proline-rich small protein YnaL;protein_id=WP_001670836.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 58079 59452 . + . ID=gene-SO06_RS00315;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=SO06_RS00315 NZ_MYDG01000001.1 Protein Homology CDS 58079 59452 . + 0 ID=cds-WP_000123688.1;Parent=gene-SO06_RS00315;Dbxref=GenBank:WP_000123688.1;Name=WP_000123688.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=SO06_RS00315;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123688.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 59496 60431 . - . ID=gene-SO06_RS00320;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=SO06_RS00320 NZ_MYDG01000001.1 Protein Homology CDS 59496 60431 . - 0 ID=cds-WP_001156218.1;Parent=gene-SO06_RS00320;Dbxref=GenBank:WP_001156218.1;Name=WP_001156218.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=SO06_RS00320;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001156218.1;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 60483 60689 . - . ID=gene-SO06_RS00325;Name=SO06_RS00325;end_range=60689,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS00325;partial=true;pseudo=true NZ_MYDG01000001.1 Protein Homology CDS 60483 60689 . - 0 ID=cds-SO06_RS00325;Parent=gene-SO06_RS00325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=60689,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=SO06_RS00325;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 61119 64541 . + . ID=gene-SO06_RS00330;Name=SO06_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00330 NZ_MYDG01000001.1 Protein Homology CDS 61119 64541 . + 0 ID=cds-WP_080204147.1;Parent=gene-SO06_RS00330;Dbxref=GenBank:WP_080204147.1;Name=WP_080204147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=SO06_RS00330;product=DUF4765 family protein;protein_id=WP_080204147.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 64810 65148 . + . ID=gene-SO06_RS00340;Name=SO06_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00340 NZ_MYDG01000001.1 Protein Homology CDS 64810 65148 . + 0 ID=cds-WP_000159242.1;Parent=gene-SO06_RS00340;Dbxref=GenBank:WP_000159242.1;Name=WP_000159242.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=SO06_RS00340;product=SMR family transporter;protein_id=WP_000159242.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 65201 65635 . - . ID=gene-SO06_RS00345;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=SO06_RS00345 NZ_MYDG01000001.1 Protein Homology CDS 65201 65635 . - 0 ID=cds-WP_001082296.1;Parent=gene-SO06_RS00345;Dbxref=GenBank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=SO06_RS00345;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 66117 69641 . - . ID=gene-SO06_RS00355;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=SO06_RS00355 NZ_MYDG01000001.1 Protein Homology CDS 66117 69641 . - 0 ID=cds-WP_080204148.1;Parent=gene-SO06_RS00355;Dbxref=GenBank:WP_080204148.1;Name=WP_080204148.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=SO06_RS00355;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_080204148.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 69702 70013 . - . ID=gene-SO06_RS00360;Name=SO06_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00360 NZ_MYDG01000001.1 Protein Homology CDS 69702 70013 . - 0 ID=cds-WP_031619378.1;Parent=gene-SO06_RS00360;Dbxref=GenBank:WP_031619378.1;Name=WP_031619378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=SO06_RS00360;product=hypothetical protein;protein_id=WP_031619378.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 69917 70183 . + . ID=gene-SO06_RS00365;Name=SO06_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00365 NZ_MYDG01000001.1 Protein Homology CDS 69917 70183 . + 0 ID=cds-WP_001200679.1;Parent=gene-SO06_RS00365;Dbxref=GenBank:WP_001200679.1;Name=WP_001200679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=SO06_RS00365;product=putative hemolysin;protein_id=WP_001200679.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 70227 70637 . - . ID=gene-SO06_RS00370;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=SO06_RS00370 NZ_MYDG01000001.1 Protein Homology CDS 70227 70637 . - 0 ID=cds-WP_000725242.1;Parent=gene-SO06_RS00370;Dbxref=GenBank:WP_000725242.1;Name=WP_000725242.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=SO06_RS00370;product=heat shock protein HslJ;protein_id=WP_000725242.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 70748 71737 . - . ID=gene-SO06_RS00375;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=SO06_RS00375 NZ_MYDG01000001.1 Protein Homology CDS 70748 71737 . - 0 ID=cds-WP_000762206.1;Parent=gene-SO06_RS00375;Dbxref=GenBank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=SO06_RS00375;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 71977 74613 . + . ID=gene-SO06_RS00380;Name=SO06_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00380 NZ_MYDG01000001.1 Protein Homology CDS 71977 74613 . + 0 ID=cds-WP_023231256.1;Parent=gene-SO06_RS00380;Dbxref=GenBank:WP_023231256.1;Name=WP_023231256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=SO06_RS00380;product=YdbH family protein;protein_id=WP_023231256.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 74613 74804 . + . ID=gene-SO06_RS00385;Name=SO06_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00385 NZ_MYDG01000001.1 Protein Homology CDS 74613 74804 . + 0 ID=cds-WP_000784063.1;Parent=gene-SO06_RS00385;Dbxref=GenBank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=SO06_RS00385;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 74812 75135 . + . ID=gene-SO06_RS00390;Name=SO06_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00390 NZ_MYDG01000001.1 Protein Homology CDS 74812 75135 . + 0 ID=cds-WP_000760414.1;Parent=gene-SO06_RS00390;Dbxref=GenBank:WP_000760414.1;Name=WP_000760414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=SO06_RS00390;product=YdbL family protein;protein_id=WP_000760414.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 75278 75727 . + . ID=gene-SO06_RS00395;Name=SO06_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00395 NZ_MYDG01000001.1 Protein Homology CDS 75278 75727 . + 0 ID=cds-WP_001518898.1;Parent=gene-SO06_RS00395;Dbxref=GenBank:WP_001518898.1;Name=WP_001518898.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=SO06_RS00395;product=GFA family protein;protein_id=WP_001518898.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 75724 76329 . - . ID=gene-SO06_RS00400;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=SO06_RS00400 NZ_MYDG01000001.1 Protein Homology CDS 75724 76329 . - 0 ID=cds-WP_000048924.1;Parent=gene-SO06_RS00400;Dbxref=GenBank:WP_000048924.1;Name=WP_000048924.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=SO06_RS00400;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048924.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 76530 80432 . + . ID=gene-SO06_RS00405;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=SO06_RS00405 NZ_MYDG01000001.1 Protein Homology CDS 76530 80432 . + 0 ID=cds-WP_048348892.1;Parent=gene-SO06_RS00405;Dbxref=GenBank:WP_048348892.1;Name=WP_048348892.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=SO06_RS00405;product=ATP-dependent RNA helicase HrpA;protein_id=WP_048348892.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 80496 81296 . + . ID=gene-SO06_RS00410;Name=SO06_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00410 NZ_MYDG01000001.1 Protein Homology CDS 80496 81296 . + 0 ID=cds-WP_023231530.1;Parent=gene-SO06_RS00410;Dbxref=GenBank:WP_023231530.1;Name=WP_023231530.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=SO06_RS00410;product=YdcF family protein;protein_id=WP_023231530.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 81413 81943 . + . ID=gene-SO06_RS00415;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=SO06_RS00415 NZ_MYDG01000001.1 Protein Homology CDS 81413 81943 . + 0 ID=cds-WP_000527277.1;Parent=gene-SO06_RS00415;Dbxref=GenBank:WP_000527277.1;Name=WP_000527277.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=SO06_RS00415;product=cytochrome b561;protein_id=WP_000527277.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 82214 82876 . - . ID=gene-SO06_RS00420;Name=SO06_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00420 NZ_MYDG01000001.1 Protein Homology CDS 82214 82876 . - 0 ID=cds-WP_000683309.1;Parent=gene-SO06_RS00420;Dbxref=GenBank:WP_000683309.1;Name=WP_000683309.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576082.1;locus_tag=SO06_RS00420;product=class I SAM-dependent methyltransferase;protein_id=WP_000683309.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 83340 84890 . - . ID=gene-SO06_RS00425;Name=SO06_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00425 NZ_MYDG01000001.1 Protein Homology CDS 83340 84890 . - 0 ID=cds-WP_023231529.1;Parent=gene-SO06_RS00425;Dbxref=GenBank:WP_023231529.1;Name=WP_023231529.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=SO06_RS00425;product=glycosyltransferase family 39 protein;protein_id=WP_023231529.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 85027 85707 . - . ID=gene-SO06_RS00430;Name=SO06_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00430 NZ_MYDG01000001.1 Protein Homology CDS 85027 85707 . - 0 ID=cds-WP_000560165.1;Parent=gene-SO06_RS00430;Dbxref=GenBank:WP_000560165.1;Name=WP_000560165.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=SO06_RS00430;product=amino acid ABC transporter permease;protein_id=WP_000560165.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 85704 86435 . - . ID=gene-SO06_RS00435;Name=SO06_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00435 NZ_MYDG01000001.1 Protein Homology CDS 85704 86435 . - 0 ID=cds-WP_023231528.1;Parent=gene-SO06_RS00435;Dbxref=GenBank:WP_023231528.1;Name=WP_023231528.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=SO06_RS00435;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_023231528.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 86460 87107 . - . ID=gene-SO06_RS00440;Name=SO06_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00440 NZ_MYDG01000001.1 Protein Homology CDS 86460 87107 . - 0 ID=cds-WP_000094446.1;Parent=gene-SO06_RS00440;Dbxref=GenBank:WP_000094446.1;Name=WP_000094446.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=SO06_RS00440;product=amino acid ABC transporter permease;protein_id=WP_000094446.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 87114 87875 . - . ID=gene-SO06_RS00445;Name=SO06_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00445 NZ_MYDG01000001.1 Protein Homology CDS 87114 87875 . - 0 ID=cds-WP_000949382.1;Parent=gene-SO06_RS00445;Dbxref=GenBank:WP_000949382.1;Name=WP_000949382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=SO06_RS00445;product=transporter substrate-binding domain-containing protein;protein_id=WP_000949382.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 88782 89126 . + . ID=gene-SO06_RS00450;Name=SO06_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00450 NZ_MYDG01000001.1 Protein Homology CDS 88782 89126 . + 0 ID=cds-WP_000281189.1;Parent=gene-SO06_RS00450;Dbxref=GenBank:WP_000281189.1;Name=WP_000281189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=SO06_RS00450;product=DUF1294 domain-containing protein;protein_id=WP_000281189.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 89247 90473 . - . ID=gene-SO06_RS00455;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=SO06_RS00455 NZ_MYDG01000001.1 Protein Homology CDS 89247 90473 . - 0 ID=cds-WP_023231527.1;Parent=gene-SO06_RS00455;Dbxref=GenBank:WP_023231527.1;Name=WP_023231527.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=SO06_RS00455;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_023231527.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 90894 91610 . + . ID=gene-SO06_RS00460;Name=SO06_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00460 NZ_MYDG01000001.1 Protein Homology CDS 90894 91610 . + 0 ID=cds-WP_001588428.1;Parent=gene-SO06_RS00460;Dbxref=GenBank:WP_001588428.1;Name=WP_001588428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=SO06_RS00460;product=hypothetical protein;protein_id=WP_001588428.1;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 91739 91927 . - . ID=gene-SO06_RS00465;Name=steB;end_range=91927,.;gbkey=Gene;gene=steB;gene_biotype=pseudogene;locus_tag=SO06_RS00465;partial=true;pseudo=true NZ_MYDG01000001.1 Protein Homology CDS 91739 91927 . - 0 ID=cds-SO06_RS00465;Parent=gene-SO06_RS00465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=91927,.;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=SO06_RS00465;partial=true;product=type III secretion system effector SteB;pseudo=true;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 92395 92670 . + . ID=gene-SO06_RS00470;Name=SO06_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00470 NZ_MYDG01000001.1 Protein Homology CDS 92395 92670 . + 0 ID=cds-WP_001120770.1;Parent=gene-SO06_RS00470;Dbxref=GenBank:WP_001120770.1;Name=WP_001120770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=SO06_RS00470;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_001120770.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 92702 93820 . + . ID=gene-SO06_RS00475;Name=SO06_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00475 NZ_MYDG01000001.1 Protein Homology CDS 92702 93820 . + 0 ID=cds-WP_000842141.1;Parent=gene-SO06_RS00475;Dbxref=GenBank:WP_000842141.1;Name=WP_000842141.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=SO06_RS00475;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842141.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 93989 95614 . + . ID=gene-SO06_RS00485;Name=SO06_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00485 NZ_MYDG01000001.1 Protein Homology CDS 93989 95614 . + 0 ID=cds-WP_023231525.1;Parent=gene-SO06_RS00485;Dbxref=GenBank:WP_023231525.1;Name=WP_023231525.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=SO06_RS00485;product=methyl-accepting chemotaxis protein;protein_id=WP_023231525.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 95675 96598 . - . ID=gene-SO06_RS00490;Name=SO06_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00490 NZ_MYDG01000001.1 Protein Homology CDS 95675 96598 . - 0 ID=cds-WP_000414259.1;Parent=gene-SO06_RS00490;Dbxref=GenBank:WP_000414259.1;Name=WP_000414259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=SO06_RS00490;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414259.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 96891 98234 . + . ID=gene-SO06_RS00495;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=SO06_RS00495 NZ_MYDG01000001.1 Protein Homology CDS 96891 98234 . + 0 ID=cds-WP_023231524.1;Parent=gene-SO06_RS00495;Dbxref=GenBank:WP_023231524.1;Name=WP_023231524.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=SO06_RS00495;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_023231524.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 98283 99791 . + . ID=gene-SO06_RS00500;Name=SO06_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00500 NZ_MYDG01000001.1 Protein Homology CDS 98283 99791 . + 0 ID=cds-WP_000933978.1;Parent=gene-SO06_RS00500;Dbxref=GenBank:WP_000933978.1;Name=WP_000933978.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=SO06_RS00500;product=carboxylesterase/lipase family protein;protein_id=WP_000933978.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 100011 101666 . + . ID=gene-SO06_RS00505;Name=SO06_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00505 NZ_MYDG01000001.1 Protein Homology CDS 100011 101666 . + 0 ID=cds-WP_023231523.1;Parent=gene-SO06_RS00505;Dbxref=GenBank:WP_023231523.1;Name=WP_023231523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=SO06_RS00505;product=glucan biosynthesis protein D;protein_id=WP_023231523.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 101862 102437 . + . ID=gene-SO06_RS00510;Name=SO06_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00510 NZ_MYDG01000001.1 Protein Homology CDS 101862 102437 . + 0 ID=cds-WP_023231522.1;Parent=gene-SO06_RS00510;Dbxref=GenBank:WP_023231522.1;Name=WP_023231522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=SO06_RS00510;product=YceI family protein;protein_id=WP_023231522.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 102449 103651 . + . ID=gene-SO06_RS00515;Name=SO06_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00515 NZ_MYDG01000001.1 Protein Homology CDS 102449 103651 . + 0 ID=cds-WP_023231521.1;Parent=gene-SO06_RS00515;Dbxref=GenBank:WP_023231521.1;Name=WP_023231521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460579.1;locus_tag=SO06_RS00515;product=lactate oxidase;protein_id=WP_023231521.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 103698 104135 . - . ID=gene-SO06_RS00520;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=SO06_RS00520 NZ_MYDG01000001.1 Protein Homology CDS 103698 104135 . - 0 ID=cds-WP_048348829.1;Parent=gene-SO06_RS00520;Dbxref=GenBank:WP_048348829.1;Name=WP_048348829.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=SO06_RS00520;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_048348829.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 104135 104926 . - . ID=gene-SO06_RS00525;Name=SO06_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00525 NZ_MYDG01000001.1 Protein Homology CDS 104135 104926 . - 0 ID=cds-WP_001670738.1;Parent=gene-SO06_RS00525;Dbxref=GenBank:WP_001670738.1;Name=WP_001670738.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=SO06_RS00525;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001670738.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 104942 105574 . - . ID=gene-SO06_RS00530;Name=SO06_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00530 NZ_MYDG01000001.1 Protein Homology CDS 104942 105574 . - 0 ID=cds-WP_024156955.1;Parent=gene-SO06_RS00530;Dbxref=GenBank:WP_024156955.1;Name=WP_024156955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=SO06_RS00530;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_024156955.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 105586 106023 . - . ID=gene-SO06_RS00535;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=SO06_RS00535 NZ_MYDG01000001.1 Protein Homology CDS 105586 106023 . - 0 ID=cds-WP_023232561.1;Parent=gene-SO06_RS00535;Dbxref=GenBank:WP_023232561.1;Name=WP_023232561.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=SO06_RS00535;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_023232561.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 106155 106961 . - . ID=gene-SO06_RS00540;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=SO06_RS00540 NZ_MYDG01000001.1 Protein Homology CDS 106155 106961 . - 0 ID=cds-WP_000118615.1;Parent=gene-SO06_RS00540;Dbxref=GenBank:WP_000118615.1;Name=WP_000118615.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=SO06_RS00540;product=BtpA family protein SgcQ;protein_id=WP_000118615.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 106975 108288 . - . ID=gene-SO06_RS00545;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=SO06_RS00545 NZ_MYDG01000001.1 Protein Homology CDS 106975 108288 . - 0 ID=cds-WP_000460835.1;Parent=gene-SO06_RS00545;Dbxref=GenBank:WP_000460835.1;Name=WP_000460835.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=SO06_RS00545;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_000460835.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 108299 108580 . - . ID=gene-SO06_RS00550;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=SO06_RS00550 NZ_MYDG01000001.1 Protein Homology CDS 108299 108580 . - 0 ID=cds-WP_000976132.1;Parent=gene-SO06_RS00550;Dbxref=GenBank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=SO06_RS00550;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976132.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 108577 109695 . - . ID=gene-SO06_RS00555;Name=SO06_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00555 NZ_MYDG01000001.1 Protein Homology CDS 108577 109695 . - 0 ID=cds-WP_023231511.1;Parent=gene-SO06_RS00555;Dbxref=GenBank:WP_023231511.1;Name=WP_023231511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=SO06_RS00555;product=M42 family metallopeptidase;protein_id=WP_023231511.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 109912 110451 . + . ID=gene-SO06_RS00560;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=SO06_RS00560 NZ_MYDG01000001.1 Protein Homology CDS 109912 110451 . + 0 ID=cds-WP_023206029.1;Parent=gene-SO06_RS00560;Dbxref=GenBank:WP_023206029.1;Name=WP_023206029.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=SO06_RS00560;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_023206029.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 110448 111428 . - . ID=gene-SO06_RS00565;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=SO06_RS00565 NZ_MYDG01000001.1 Protein Homology CDS 110448 111428 . - 0 ID=cds-WP_023231512.1;Parent=gene-SO06_RS00565;Dbxref=GenBank:WP_023231512.1;Name=WP_023231512.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=SO06_RS00565;product=YdcK family protein;protein_id=WP_023231512.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 111535 112548 . + . ID=gene-SO06_RS00570;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=SO06_RS00570 NZ_MYDG01000001.1 Protein Homology CDS 111535 112548 . + 0 ID=cds-WP_001244002.1;Parent=gene-SO06_RS00570;Dbxref=GenBank:WP_001244002.1;Name=WP_001244002.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=SO06_RS00570;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001244002.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 112535 113131 . + . ID=gene-SO06_RS00575;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=SO06_RS00575 NZ_MYDG01000001.1 Protein Homology CDS 112535 113131 . + 0 ID=cds-WP_000218280.1;Parent=gene-SO06_RS00575;Dbxref=GenBank:WP_000218280.1;Name=WP_000218280.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=SO06_RS00575;product=tellurite resistance methyltransferase TehB;protein_id=WP_000218280.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 113287 113955 . + . ID=gene-SO06_RS00580;Name=SO06_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00580 NZ_MYDG01000001.1 Protein Homology CDS 113287 113955 . + 0 ID=cds-WP_001259025.1;Parent=gene-SO06_RS00580;Dbxref=GenBank:WP_001259025.1;Name=WP_001259025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=SO06_RS00580;product=DUF3313 domain-containing protein;protein_id=WP_001259025.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 114009 115187 . - . ID=gene-SO06_RS00585;Name=SO06_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00585 NZ_MYDG01000001.1 Protein Homology CDS 114009 115187 . - 0 ID=cds-WP_023231515.1;Parent=gene-SO06_RS00585;Dbxref=GenBank:WP_023231515.1;Name=WP_023231515.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=SO06_RS00585;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_023231515.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 115279 115815 . + . ID=gene-SO06_RS00590;Name=SO06_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00590 NZ_MYDG01000001.1 Protein Homology CDS 115279 115815 . + 0 ID=cds-WP_000369543.1;Parent=gene-SO06_RS00590;Dbxref=GenBank:WP_000369543.1;Name=WP_000369543.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=SO06_RS00590;product=helix-turn-helix domain-containing protein;protein_id=WP_000369543.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 115894 117858 . + . ID=gene-SO06_RS00595;Name=SO06_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00595 NZ_MYDG01000001.1 Protein Homology CDS 115894 117858 . + 0 ID=cds-WP_023231516.1;Parent=gene-SO06_RS00595;Dbxref=GenBank:WP_023231516.1;Name=WP_023231516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=SO06_RS00595;product=peptidase U32 family protein;protein_id=WP_023231516.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 117859 118089 . - . ID=gene-SO06_RS00600;Name=SO06_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00600 NZ_MYDG01000001.1 Protein Homology CDS 117859 118089 . - 0 ID=cds-WP_000956438.1;Parent=gene-SO06_RS00600;Dbxref=GenBank:WP_000956438.1;Name=WP_000956438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=SO06_RS00600;product=DUF2554 family protein;protein_id=WP_000956438.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 118361 119311 . - . ID=gene-SO06_RS00605;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=SO06_RS00605 NZ_MYDG01000001.1 Protein Homology CDS 118361 119311 . - 0 ID=cds-WP_023231517.1;Parent=gene-SO06_RS00605;Dbxref=GenBank:WP_023231517.1;Name=WP_023231517.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=SO06_RS00605;product=SPI-2 type III secretion system effector SifB;protein_id=WP_023231517.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 119816 120214 . + . ID=gene-SO06_RS00610;Name=ugtL;gbkey=Gene;gene=ugtL;gene_biotype=protein_coding;locus_tag=SO06_RS00610 NZ_MYDG01000001.1 Protein Homology CDS 119816 120214 . + 0 ID=cds-WP_001649405.1;Parent=gene-SO06_RS00610;Dbxref=GenBank:WP_001649405.1;Name=WP_001649405.1;gbkey=CDS;gene=ugtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=SO06_RS00610;product=regulatory protein UgtL;protein_id=WP_001649405.1;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 120247 120477 . + . ID=gene-SO06_RS00615;Name=SO06_RS00615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS00615;pseudo=true NZ_MYDG01000001.1 Protein Homology CDS 120247 120477 . + 0 ID=cds-SO06_RS00615;Parent=gene-SO06_RS00615;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=SO06_RS00615;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 120736 121506 . + . ID=gene-SO06_RS00620;Name=SO06_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00620 NZ_MYDG01000001.1 Protein Homology CDS 120736 121506 . + 0 ID=cds-WP_023232541.1;Parent=gene-SO06_RS00620;Dbxref=GenBank:WP_023232541.1;Name=WP_023232541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=SO06_RS00620;product=M15 family metallopeptidase;protein_id=WP_023232541.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 121642 123066 . + . ID=gene-SO06_RS00625;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=SO06_RS00625 NZ_MYDG01000001.1 Protein Homology CDS 121642 123066 . + 0 ID=cds-WP_000760692.1;Parent=gene-SO06_RS00625;Dbxref=GenBank:WP_000760692.1;Name=WP_000760692.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=SO06_RS00625;product=GntR family transcriptional regulator YdcR;protein_id=WP_000760692.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 123181 124626 . + . ID=gene-SO06_RS00630;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=SO06_RS00630 NZ_MYDG01000001.1 Protein Homology CDS 123181 124626 . + 0 ID=cds-WP_024148515.1;Parent=gene-SO06_RS00630;Dbxref=GenBank:WP_024148515.1;Name=WP_024148515.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=SO06_RS00630;product=aminobutyraldehyde dehydrogenase;protein_id=WP_024148515.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 124731 124826 . - . ID=gene-SO06_RS00635;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=SO06_RS00635 NZ_MYDG01000001.1 Protein Homology CDS 124731 124826 . - 0 ID=cds-WP_001103198.1;Parent=gene-SO06_RS00635;Dbxref=GenBank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=SO06_RS00635;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 125025 125198 . + . ID=gene-SO06_RS00640;Name=SO06_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00640 NZ_MYDG01000001.1 Protein Homology CDS 125025 125198 . + 0 ID=cds-WP_000171943.1;Parent=gene-SO06_RS00640;Dbxref=GenBank:WP_000171943.1;Name=WP_000171943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=SO06_RS00640;product=GhoT/OrtT family toxin;protein_id=WP_000171943.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 125243 127387 . - . ID=gene-SO06_RS00645;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=SO06_RS00645 NZ_MYDG01000001.1 Protein Homology CDS 125243 127387 . - 0 ID=cds-WP_048348830.1;Parent=gene-SO06_RS00645;Dbxref=GenBank:WP_048348830.1;Name=WP_048348830.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=SO06_RS00645;product=virulence-associated effector SrfC;protein_id=WP_048348830.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 127384 130365 . - . ID=gene-SO06_RS00650;Name=SO06_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00650 NZ_MYDG01000001.1 Protein Homology CDS 127384 130365 . - 0 ID=cds-WP_080204149.1;Parent=gene-SO06_RS00650;Dbxref=GenBank:WP_080204149.1;Name=WP_080204149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=SO06_RS00650;product=virulence factor SrfB;protein_id=WP_080204149.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 130370 131695 . - . ID=gene-SO06_RS00655;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=SO06_RS00655 NZ_MYDG01000001.1 Protein Homology CDS 130370 131695 . - 0 ID=cds-WP_048348831.1;Parent=gene-SO06_RS00655;Dbxref=GenBank:WP_048348831.1;Name=WP_048348831.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=SO06_RS00655;product=virulence-associated effector SrfA;protein_id=WP_048348831.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 131919 132152 . + . ID=gene-SO06_RS00660;Name=SO06_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00660 NZ_MYDG01000001.1 Protein Homology CDS 131919 132152 . + 0 ID=cds-WP_000018720.1;Parent=gene-SO06_RS00660;Dbxref=GenBank:WP_000018720.1;Name=WP_000018720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=SO06_RS00660;product=YdcY family protein;protein_id=WP_000018720.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 132157 132606 . - . ID=gene-SO06_RS00665;Name=SO06_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00665 NZ_MYDG01000001.1 Protein Homology CDS 132157 132606 . - 0 ID=cds-WP_001076571.1;Parent=gene-SO06_RS00665;Dbxref=GenBank:WP_001076571.1;Name=WP_001076571.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=SO06_RS00665;product=DMT family transporter;protein_id=WP_001076571.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 132606 133121 . - . ID=gene-SO06_RS00670;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=SO06_RS00670 NZ_MYDG01000001.1 Protein Homology CDS 132606 133121 . - 0 ID=cds-WP_000155373.1;Parent=gene-SO06_RS00670;Dbxref=GenBank:WP_000155373.1;Name=WP_000155373.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=SO06_RS00670;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_000155373.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 133333 134370 . + . ID=gene-SO06_RS00675;Name=SO06_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00675 NZ_MYDG01000001.1 Protein Homology CDS 133333 134370 . + 0 ID=cds-WP_001517827.1;Parent=gene-SO06_RS00675;Dbxref=GenBank:WP_001517827.1;Name=WP_001517827.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=SO06_RS00675;product=NADP-dependent oxidoreductase;protein_id=WP_001517827.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 134704 135369 . + . ID=gene-SO06_RS00680;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=SO06_RS00680 NZ_MYDG01000001.1 Protein Homology CDS 134704 135369 . + 0 ID=cds-WP_023232330.1;Parent=gene-SO06_RS00680;Dbxref=GenBank:WP_023232330.1;Name=WP_023232330.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=SO06_RS00680;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_023232330.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 135436 137556 . - . ID=gene-SO06_RS00685;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=SO06_RS00685 NZ_MYDG01000001.1 Protein Homology CDS 135436 137556 . - 0 ID=cds-WP_023232331.1;Parent=gene-SO06_RS00685;Dbxref=GenBank:WP_023232331.1;Name=WP_023232331.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=SO06_RS00685;product=TonB-dependent receptor PqqU;protein_id=WP_023232331.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 137820 138881 . + . ID=gene-SO06_RS00690;Name=SO06_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00690 NZ_MYDG01000001.1 Protein Homology CDS 137820 138881 . + 0 ID=cds-WP_000550636.1;Parent=gene-SO06_RS00690;Dbxref=GenBank:WP_000550636.1;Name=WP_000550636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=SO06_RS00690;product=7-bladed beta-propeller protein YncE;protein_id=WP_000550636.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 139026 139247 . + . ID=gene-SO06_RS00695;Name=SO06_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00695 NZ_MYDG01000001.1 Protein Homology CDS 139026 139247 . + 0 ID=cds-WP_000732362.1;Parent=gene-SO06_RS00695;Dbxref=GenBank:WP_000732362.1;Name=WP_000732362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=SO06_RS00695;product=YgdI/YgdR family lipoprotein;protein_id=WP_000732362.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 139324 140817 . - . ID=gene-SO06_RS00700;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=SO06_RS00700 NZ_MYDG01000001.1 Protein Homology CDS 139324 140817 . - 0 ID=cds-WP_000857112.1;Parent=gene-SO06_RS00700;Dbxref=GenBank:WP_000857112.1;Name=WP_000857112.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=SO06_RS00700;product=L-asparagine permease;protein_id=WP_000857112.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 141330 141962 . + . ID=gene-SO06_RS00710;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=SO06_RS00710 NZ_MYDG01000001.1 Protein Homology CDS 141330 141962 . + 0 ID=cds-WP_023232332.1;Parent=gene-SO06_RS00710;Dbxref=GenBank:WP_023232332.1;Name=WP_023232332.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=SO06_RS00710;product=type III secretion system effector SteA;protein_id=WP_023232332.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 142246 143091 . + . ID=gene-SO06_RS00715;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=SO06_RS00715 NZ_MYDG01000001.1 Protein Homology CDS 142246 143091 . + 0 ID=cds-WP_023232333.1;Parent=gene-SO06_RS00715;Dbxref=GenBank:WP_023232333.1;Name=WP_023232333.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=SO06_RS00715;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_023232333.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 143127 144020 . - . ID=gene-SO06_RS00720;Name=SO06_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00720 NZ_MYDG01000001.1 Protein Homology CDS 143127 144020 . - 0 ID=cds-WP_000804297.1;Parent=gene-SO06_RS00720;Dbxref=GenBank:WP_000804297.1;Name=WP_000804297.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=SO06_RS00720;product=PhzF family isomerase;protein_id=WP_000804297.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 144126 144806 . - . ID=gene-SO06_RS00725;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=SO06_RS00725 NZ_MYDG01000001.1 Protein Homology CDS 144126 144806 . - 0 ID=cds-WP_000617106.1;Parent=gene-SO06_RS00725;Dbxref=GenBank:WP_000617106.1;Name=WP_000617106.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=SO06_RS00725;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617106.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 144803 145498 . - . ID=gene-SO06_RS00730;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=SO06_RS00730 NZ_MYDG01000001.1 Protein Homology CDS 144803 145498 . - 0 ID=cds-WP_001166287.1;Parent=gene-SO06_RS00730;Dbxref=GenBank:WP_001166287.1;Name=WP_001166287.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=SO06_RS00730;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166287.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 145498 147042 . - . ID=gene-SO06_RS00735;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=SO06_RS00735 NZ_MYDG01000001.1 Protein Homology CDS 145498 147042 . - 0 ID=cds-WP_000702595.1;Parent=gene-SO06_RS00735;Dbxref=GenBank:WP_000702595.1;Name=WP_000702595.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=SO06_RS00735;product=nitrate reductase subunit beta;protein_id=WP_000702595.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 147039 150779 . - . ID=gene-SO06_RS00740;Name=SO06_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00740 NZ_MYDG01000001.1 Protein Homology CDS 147039 150779 . - 0 ID=cds-WP_048348833.1;Parent=gene-SO06_RS00740;Dbxref=GenBank:WP_048348833.1;Name=WP_048348833.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=SO06_RS00740;product=nitrate reductase subunit alpha;protein_id=WP_048348833.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 150871 152259 . - . ID=gene-SO06_RS00745;Name=SO06_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00745 NZ_MYDG01000001.1 Protein Homology CDS 150871 152259 . - 0 ID=cds-WP_048348834.1;Parent=gene-SO06_RS00745;Dbxref=GenBank:WP_048348834.1;Name=WP_048348834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=SO06_RS00745;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_048348834.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 152473 153051 . - . ID=gene-SO06_RS00750;Name=SO06_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00750 NZ_MYDG01000001.1 Protein Homology CDS 152473 153051 . - 0 ID=cds-WP_023231475.1;Parent=gene-SO06_RS00750;Dbxref=GenBank:WP_023231475.1;Name=WP_023231475.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=SO06_RS00750;product=TetR family transcriptional regulator;protein_id=WP_023231475.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 153169 154656 . + . ID=gene-SO06_RS00755;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=SO06_RS00755 NZ_MYDG01000001.1 Protein Homology CDS 153169 154656 . + 0 ID=cds-WP_000489736.1;Parent=gene-SO06_RS00755;Dbxref=GenBank:WP_000489736.1;Name=WP_000489736.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=SO06_RS00755;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_000489736.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 154681 155061 . - . ID=gene-SO06_RS00760;Name=SO06_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00760 NZ_MYDG01000001.1 Protein Homology CDS 154681 155061 . - 0 ID=cds-WP_014343841.1;Parent=gene-SO06_RS00760;Dbxref=GenBank:WP_014343841.1;Name=WP_014343841.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=SO06_RS00760;product=GFA family protein;protein_id=WP_014343841.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 155205 156287 . - . ID=gene-SO06_RS00765;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=SO06_RS00765 NZ_MYDG01000001.1 Protein Homology CDS 155205 156287 . - 0 ID=cds-WP_000769043.1;Parent=gene-SO06_RS00765;Dbxref=GenBank:WP_000769043.1;Name=WP_000769043.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=SO06_RS00765;product=porin OmpD;protein_id=WP_000769043.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 156810 157691 . - . ID=gene-SO06_RS00775;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=SO06_RS00775 NZ_MYDG01000001.1 Protein Homology CDS 156810 157691 . - 0 ID=cds-WP_001527674.1;Parent=gene-SO06_RS00775;Dbxref=GenBank:WP_001527674.1;Name=WP_001527674.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=SO06_RS00775;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_001527674.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 157969 161016 . + . ID=gene-SO06_RS00785;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=SO06_RS00785 NZ_MYDG01000001.1 Protein Homology CDS 157969 161016 . + 0 ID=cds-WP_077684034.1;Parent=gene-SO06_RS00785;Dbxref=GenBank:WP_077684034.1;Name=WP_077684034.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=SO06_RS00785;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077684034.1;transl_except=(pos:158554..158556%2Caa:Sec);transl_table=11 NZ_MYDG01000001.1 RefSeq gene 161030 161914 . + . ID=gene-SO06_RS00790;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=SO06_RS00790 NZ_MYDG01000001.1 Protein Homology CDS 161030 161914 . + 0 ID=cds-WP_000061599.1;Parent=gene-SO06_RS00790;Dbxref=GenBank:WP_000061599.1;Name=WP_000061599.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=SO06_RS00790;product=formate dehydrogenase subunit beta;protein_id=WP_000061599.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 161907 162563 . + . ID=gene-SO06_RS00795;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=SO06_RS00795 NZ_MYDG01000001.1 Protein Homology CDS 161907 162563 . + 0 ID=cds-WP_000045658.1;Parent=gene-SO06_RS00795;Dbxref=GenBank:WP_000045658.1;Name=WP_000045658.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=SO06_RS00795;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045658.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 162654 163664 . - . ID=gene-SO06_RS00800;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=SO06_RS00800 NZ_MYDG01000001.1 Protein Homology CDS 162654 163664 . - 0 ID=cds-WP_000642447.1;Parent=gene-SO06_RS00800;Dbxref=GenBank:WP_000642447.1;Name=WP_000642447.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=SO06_RS00800;product=alcohol dehydrogenase AdhP;protein_id=WP_000642447.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 163946 165643 . - . ID=gene-SO06_RS00805;Name=SO06_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00805 NZ_MYDG01000001.1 Protein Homology CDS 163946 165643 . - 0 ID=cds-WP_000450511.1;Parent=gene-SO06_RS00805;Dbxref=GenBank:WP_000450511.1;Name=WP_000450511.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=SO06_RS00805;product=NAD-dependent malic enzyme;protein_id=WP_000450511.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 165820 165963 . - . ID=gene-SO06_RS00810;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=SO06_RS00810 NZ_MYDG01000001.1 Protein Homology CDS 165820 165963 . - 0 ID=cds-WP_000841559.1;Parent=gene-SO06_RS00810;Dbxref=GenBank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=SO06_RS00810;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 166058 166273 . - . ID=gene-SO06_RS00815;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=SO06_RS00815 NZ_MYDG01000001.1 Protein Homology CDS 166058 166273 . - 0 ID=cds-WP_000495700.1;Parent=gene-SO06_RS00815;Dbxref=GenBank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=SO06_RS00815;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 166785 167216 . + . ID=gene-SO06_RS00820;Name=SO06_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00820 NZ_MYDG01000001.1 Protein Homology CDS 166785 167216 . + 0 ID=cds-WP_000152297.1;Parent=gene-SO06_RS00820;Dbxref=GenBank:WP_000152297.1;Name=WP_000152297.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=SO06_RS00820;product=OsmC family protein;protein_id=WP_000152297.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 167566 167895 . + . ID=gene-SO06_RS00825;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=SO06_RS00825 NZ_MYDG01000001.1 Protein Homology CDS 167566 167895 . + 0 ID=cds-WP_001032161.1;Parent=gene-SO06_RS00825;Dbxref=GenBank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=SO06_RS00825;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 168038 168823 . + . ID=gene-SO06_RS00830;Name=SO06_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00830 NZ_MYDG01000001.1 Protein Homology CDS 168038 168823 . + 0 ID=cds-WP_000698598.1;Parent=gene-SO06_RS00830;Dbxref=GenBank:WP_000698598.1;Name=WP_000698598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=SO06_RS00830;product=OBAP family protein;protein_id=WP_000698598.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 168952 170736 . + . ID=gene-SO06_RS00835;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=SO06_RS00835 NZ_MYDG01000001.1 Protein Homology CDS 168952 170736 . + 0 ID=cds-WP_048348835.1;Parent=gene-SO06_RS00835;Dbxref=GenBank:WP_048348835.1;Name=WP_048348835.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=SO06_RS00835;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_048348835.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 170733 173261 . + . ID=gene-SO06_RS00840;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=SO06_RS00840 NZ_MYDG01000001.1 Protein Homology CDS 170733 173261 . + 0 ID=cds-WP_080204150.1;Parent=gene-SO06_RS00840;Dbxref=GenBank:WP_080204150.1;Name=WP_080204150.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=SO06_RS00840;product=malto-oligosyltrehalose synthase;protein_id=WP_080204150.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 173318 175393 . + . ID=gene-SO06_RS00845;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=SO06_RS00845 NZ_MYDG01000001.1 Protein Homology CDS 173318 175393 . + 0 ID=cds-WP_048348837.1;Parent=gene-SO06_RS00845;Dbxref=GenBank:WP_048348837.1;Name=WP_048348837.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=SO06_RS00845;product=glycogen debranching protein GlgX;protein_id=WP_048348837.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 175507 176709 . - . ID=gene-SO06_RS00850;Name=SO06_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00850 NZ_MYDG01000001.1 Protein Homology CDS 175507 176709 . - 0 ID=cds-WP_048348838.1;Parent=gene-SO06_RS00850;Dbxref=GenBank:WP_048348838.1;Name=WP_048348838.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=SO06_RS00850;product=MalY/PatB family protein;protein_id=WP_048348838.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 176722 178173 . - . ID=gene-SO06_RS00855;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=SO06_RS00855 NZ_MYDG01000001.1 Protein Homology CDS 176722 178173 . - 0 ID=cds-WP_001276631.1;Parent=gene-SO06_RS00855;Dbxref=GenBank:WP_001276631.1;Name=WP_001276631.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=SO06_RS00855;product=Na+/H+ antiporter NhaC;protein_id=WP_001276631.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 178317 179324 . - . ID=gene-SO06_RS00860;Name=SO06_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00860 NZ_MYDG01000001.1 Protein Homology CDS 178317 179324 . - 0 ID=cds-WP_000201071.1;Parent=gene-SO06_RS00860;Dbxref=GenBank:WP_000201071.1;Name=WP_000201071.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=SO06_RS00860;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000201071.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 179582 181048 . + . ID=gene-SO06_RS00865;Name=SO06_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00865 NZ_MYDG01000001.1 Protein Homology CDS 179582 181048 . + 0 ID=cds-WP_000987827.1;Parent=gene-SO06_RS00865;Dbxref=GenBank:WP_000987827.1;Name=WP_000987827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=SO06_RS00865;product=hypothetical protein;protein_id=WP_000987827.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 181303 182283 . - . ID=gene-SO06_RS00870;Name=SO06_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00870 NZ_MYDG01000001.1 Protein Homology CDS 181303 182283 . - 0 ID=cds-WP_023138151.1;Parent=gene-SO06_RS00870;Dbxref=GenBank:WP_023138151.1;Name=WP_023138151.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441349.1;locus_tag=SO06_RS00870;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_023138151.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 182457 183365 . - . ID=gene-SO06_RS00875;Name=SO06_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00875 NZ_MYDG01000001.1 Protein Homology CDS 182457 183365 . - 0 ID=cds-WP_001176641.1;Parent=gene-SO06_RS00875;Dbxref=GenBank:WP_001176641.1;Name=WP_001176641.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176636.1;locus_tag=SO06_RS00875;product=LysR family transcriptional regulator;protein_id=WP_001176641.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 183766 183951 . + . ID=gene-SO06_RS00880;Name=SO06_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00880 NZ_MYDG01000001.1 Protein Homology CDS 183766 183951 . + 0 ID=cds-WP_023231783.1;Parent=gene-SO06_RS00880;Dbxref=GenBank:WP_023231783.1;Name=WP_023231783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276020.1;locus_tag=SO06_RS00880;product=DUF29 family protein;protein_id=WP_023231783.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 184229 184486 . - . ID=gene-SO06_RS00890;Name=SO06_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00890 NZ_MYDG01000001.1 Protein Homology CDS 184229 184486 . - 0 ID=cds-WP_023231782.1;Parent=gene-SO06_RS00890;Dbxref=GenBank:WP_023231782.1;Name=WP_023231782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=SO06_RS00890;product=DUF1493 family protein;protein_id=WP_023231782.1;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 184567 184764 . + . ID=gene-SO06_RS00895;Name=SO06_RS00895;end_range=184764,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS00895;partial=true;pseudo=true;start_range=.,184567 NZ_MYDG01000001.1 Protein Homology CDS 184567 184764 . + 0 ID=cds-SO06_RS00895;Parent=gene-SO06_RS00895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=184764,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567368.1;locus_tag=SO06_RS00895;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,184567;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 184927 185982 . - . ID=gene-SO06_RS00900;Name=SO06_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00900 NZ_MYDG01000001.1 Protein Homology CDS 184927 185982 . - 0 ID=cds-WP_052895217.1;Parent=gene-SO06_RS00900;Dbxref=GenBank:WP_052895217.1;Name=WP_052895217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028222.6;locus_tag=SO06_RS00900;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_052895217.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 186079 186861 . - . ID=gene-SO06_RS00905;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=SO06_RS00905 NZ_MYDG01000001.1 Protein Homology CDS 186079 186861 . - 0 ID=cds-WP_023218032.1;Parent=gene-SO06_RS00905;Dbxref=GenBank:WP_023218032.1;Name=WP_023218032.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: protein motif:HMM:NF001490.0;locus_tag=SO06_RS00905;product=5'/3'-nucleotidase SurE;protein_id=WP_023218032.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 186932 187204 . - . ID=gene-SO06_RS00910;Name=SO06_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00910 NZ_MYDG01000001.1 Protein Homology CDS 186932 187204 . - 0 ID=cds-WP_023218031.1;Parent=gene-SO06_RS00910;Dbxref=GenBank:WP_023218031.1;Name=WP_023218031.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101670.1;locus_tag=SO06_RS00910;product=HPr family phosphocarrier protein;protein_id=WP_023218031.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 187246 188085 . - . ID=gene-SO06_RS00915;Name=SO06_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00915 NZ_MYDG01000001.1 Protein Homology CDS 187246 188085 . - 0 ID=cds-WP_023218030.1;Parent=gene-SO06_RS00915;Dbxref=GenBank:WP_023218030.1;Name=WP_023218030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=SO06_RS00915;product=class II aldolase;protein_id=WP_023218030.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 188091 188834 . - . ID=gene-SO06_RS00920;Name=SO06_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00920 NZ_MYDG01000001.1 Protein Homology CDS 188091 188834 . - 0 ID=cds-WP_023218029.1;Parent=gene-SO06_RS00920;Dbxref=GenBank:WP_023218029.1;Name=WP_023218029.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020232695.1;locus_tag=SO06_RS00920;product=GntR family transcriptional regulator;protein_id=WP_023218029.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 189021 190055 . - . ID=gene-SO06_RS00925;Name=SO06_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00925 NZ_MYDG01000001.1 Protein Homology CDS 189021 190055 . - 0 ID=cds-WP_023218028.1;Parent=gene-SO06_RS00925;Dbxref=GenBank:WP_023218028.1;Name=WP_023218028.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028222.6;locus_tag=SO06_RS00925;product=zinc-dependent dehydrogenase;protein_id=WP_023218028.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 190055 191566 . - . ID=gene-SO06_RS00930;Name=SO06_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00930 NZ_MYDG01000001.1 Protein Homology CDS 190055 191566 . - 0 ID=cds-WP_023231843.1;Parent=gene-SO06_RS00930;Dbxref=GenBank:WP_023231843.1;Name=WP_023231843.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF012589.6;locus_tag=SO06_RS00930;product=FGGY-family carbohydrate kinase;protein_id=WP_023231843.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 191644 193038 . - . ID=gene-SO06_RS00935;Name=SO06_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00935 NZ_MYDG01000001.1 Protein Homology CDS 191644 193038 . - 0 ID=cds-WP_024147325.1;Parent=gene-SO06_RS00935;Dbxref=GenBank:WP_024147325.1;Name=WP_024147325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001304938.1;locus_tag=SO06_RS00935;product=PTS galactitol transporter subunit IIC;protein_id=WP_024147325.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 193047 193328 . - . ID=gene-SO06_RS00940;Name=SO06_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00940 NZ_MYDG01000001.1 Protein Homology CDS 193047 193328 . - 0 ID=cds-WP_023218025.1;Parent=gene-SO06_RS00940;Dbxref=GenBank:WP_023218025.1;Name=WP_023218025.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: protein motif:HMM:NF014368.6;locus_tag=SO06_RS00940;product=PTS sugar transporter subunit IIB;protein_id=WP_023218025.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 193388 193852 . - . ID=gene-SO06_RS00945;Name=SO06_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00945 NZ_MYDG01000001.1 Protein Homology CDS 193388 193852 . - 0 ID=cds-WP_072275481.1;Parent=gene-SO06_RS00945;Dbxref=GenBank:WP_072275481.1;Name=WP_072275481.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF012579.6;locus_tag=SO06_RS00945;product=PTS sugar transporter subunit IIA;protein_id=WP_072275481.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 194484 194732 . + . ID=gene-SO06_RS00950;Name=SO06_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00950 NZ_MYDG01000001.1 Protein Homology CDS 194484 194732 . + 0 ID=cds-WP_000885424.1;Parent=gene-SO06_RS00950;Dbxref=GenBank:WP_000885424.1;Name=WP_000885424.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=SO06_RS00950;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_000885424.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 194722 195006 . + . ID=gene-SO06_RS00955;Name=SO06_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00955 NZ_MYDG01000001.1 Protein Homology CDS 194722 195006 . + 0 ID=cds-WP_000221343.1;Parent=gene-SO06_RS00955;Dbxref=GenBank:WP_000221343.1;Name=WP_000221343.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=SO06_RS00955;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000221343.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 195177 195566 . + . ID=gene-SO06_RS00960;Name=SO06_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00960 NZ_MYDG01000001.1 Protein Homology CDS 195177 195566 . + 0 ID=cds-WP_023206403.1;Parent=gene-SO06_RS00960;Dbxref=GenBank:WP_023206403.1;Name=WP_023206403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=SO06_RS00960;product=RidA family protein;protein_id=WP_023206403.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 195618 196697 . - . ID=gene-SO06_RS00965;Name=SO06_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00965 NZ_MYDG01000001.1 Protein Homology CDS 195618 196697 . - 0 ID=cds-WP_023231841.1;Parent=gene-SO06_RS00965;Dbxref=GenBank:WP_023231841.1;Name=WP_023231841.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954687.1;locus_tag=SO06_RS00965;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_023231841.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 196890 197378 . - . ID=gene-SO06_RS00970;Name=SO06_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00970 NZ_MYDG01000001.1 Protein Homology CDS 196890 197378 . - 0 ID=cds-WP_001293638.1;Parent=gene-SO06_RS00970;Dbxref=GenBank:WP_001293638.1;Name=WP_001293638.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=SO06_RS00970;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001293638.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 197423 198931 . + . ID=gene-SO06_RS00975;Name=SO06_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00975 NZ_MYDG01000001.1 Protein Homology CDS 197423 198931 . + 0 ID=cds-WP_048348841.1;Parent=gene-SO06_RS00975;Dbxref=GenBank:WP_048348841.1;Name=WP_048348841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=SO06_RS00975;product=FAD-dependent oxidoreductase;protein_id=WP_048348841.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 198921 200162 . + . ID=gene-SO06_RS00980;Name=SO06_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00980 NZ_MYDG01000001.1 Protein Homology CDS 198921 200162 . + 0 ID=cds-WP_001618070.1;Parent=gene-SO06_RS00980;Dbxref=GenBank:WP_001618070.1;Name=WP_001618070.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=SO06_RS00980;product=MFS transporter;protein_id=WP_001618070.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 200232 201788 . + . ID=gene-SO06_RS00985;Name=SO06_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00985 NZ_MYDG01000001.1 Protein Homology CDS 200232 201788 . + 0 ID=cds-WP_072103660.1;Parent=gene-SO06_RS00985;Dbxref=GenBank:WP_072103660.1;Name=WP_072103660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=SO06_RS00985;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_072103660.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 201964 203250 . + . ID=gene-SO06_RS00990;Name=SO06_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00990 NZ_MYDG01000001.1 Protein Homology CDS 201964 203250 . + 0 ID=cds-WP_000824240.1;Parent=gene-SO06_RS00990;Dbxref=GenBank:WP_000824240.1;Name=WP_000824240.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=SO06_RS00990;product=MFS transporter;protein_id=WP_000824240.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 203225 204250 . + . ID=gene-SO06_RS00995;Name=SO06_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS00995 NZ_MYDG01000001.1 Protein Homology CDS 203225 204250 . + 0 ID=cds-WP_023216425.1;Parent=gene-SO06_RS00995;Dbxref=GenBank:WP_023216425.1;Name=WP_023216425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=SO06_RS00995;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_023216425.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 204309 205100 . - . ID=gene-SO06_RS01000;Name=SO06_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01000 NZ_MYDG01000001.1 Protein Homology CDS 204309 205100 . - 0 ID=cds-WP_000388417.1;Parent=gene-SO06_RS01000;Dbxref=GenBank:WP_000388417.1;Name=WP_000388417.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=SO06_RS01000;product=FadR/GntR family transcriptional regulator;protein_id=WP_000388417.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 205146 206237 . - . ID=gene-SO06_RS01005;Name=SO06_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01005 NZ_MYDG01000001.1 Protein Homology CDS 205146 206237 . - 0 ID=cds-WP_000976500.1;Parent=gene-SO06_RS01005;Dbxref=GenBank:WP_000976500.1;Name=WP_000976500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=SO06_RS01005;product=choloylglycine hydrolase family protein;protein_id=WP_000976500.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 206665 207768 . + . ID=gene-SO06_RS01010;Name=SO06_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01010 NZ_MYDG01000001.1 Protein Homology CDS 206665 207768 . + 0 ID=cds-WP_001194448.1;Parent=gene-SO06_RS01010;Dbxref=GenBank:WP_001194448.1;Name=WP_001194448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=SO06_RS01010;product=hydrogenase small subunit;protein_id=WP_001194448.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 207771 209573 . + . ID=gene-SO06_RS01015;Name=SO06_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01015 NZ_MYDG01000001.1 Protein Homology CDS 207771 209573 . + 0 ID=cds-WP_000331200.1;Parent=gene-SO06_RS01015;Dbxref=GenBank:WP_000331200.1;Name=WP_000331200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=SO06_RS01015;product=nickel-dependent hydrogenase large subunit;protein_id=WP_000331200.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 209524 210267 . + . ID=gene-SO06_RS01020;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=SO06_RS01020 NZ_MYDG01000001.1 Protein Homology CDS 209524 210267 . + 0 ID=cds-WP_000924456.1;Parent=gene-SO06_RS01020;Dbxref=GenBank:WP_000924456.1;Name=WP_000924456.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=SO06_RS01020;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924456.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 210273 210881 . + . ID=gene-SO06_RS01025;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=SO06_RS01025 NZ_MYDG01000001.1 Protein Homology CDS 210273 210881 . + 0 ID=cds-WP_023231920.1;Parent=gene-SO06_RS01025;Dbxref=GenBank:WP_023231920.1;Name=WP_023231920.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=SO06_RS01025;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_023231920.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 210881 211180 . + . ID=gene-SO06_RS01030;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=SO06_RS01030 NZ_MYDG01000001.1 Protein Homology CDS 210881 211180 . + 0 ID=cds-WP_023231921.1;Parent=gene-SO06_RS01030;Dbxref=GenBank:WP_023231921.1;Name=WP_023231921.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=SO06_RS01030;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_023231921.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 211177 211587 . + . ID=gene-SO06_RS01035;Name=SO06_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01035 NZ_MYDG01000001.1 Protein Homology CDS 211177 211587 . + 0 ID=cds-WP_000155981.1;Parent=gene-SO06_RS01035;Dbxref=GenBank:WP_000155981.1;Name=WP_000155981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=SO06_RS01035;product=hydrogenase;protein_id=WP_000155981.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 211605 212666 . + . ID=gene-SO06_RS01040;Name=SO06_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01040 NZ_MYDG01000001.1 Protein Homology CDS 211605 212666 . + 0 ID=cds-WP_023241915.1;Parent=gene-SO06_RS01040;Dbxref=GenBank:WP_023241915.1;Name=WP_023241915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=SO06_RS01040;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WP_023241915.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 212654 213541 . + . ID=gene-SO06_RS01045;Name=SO06_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01045 NZ_MYDG01000001.1 Protein Homology CDS 212654 213541 . + 0 ID=cds-WP_048348843.1;Parent=gene-SO06_RS01045;Dbxref=GenBank:WP_048348843.1;Name=WP_048348843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=SO06_RS01045;product=ATP/GTP-binding protein;protein_id=WP_048348843.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 213554 213895 . + . ID=gene-SO06_RS01050;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=SO06_RS01050 NZ_MYDG01000001.1 Protein Homology CDS 213554 213895 . + 0 ID=cds-WP_000544776.1;Parent=gene-SO06_RS01050;Dbxref=GenBank:WP_000544776.1;Name=WP_000544776.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=SO06_RS01050;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544776.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 214036 215154 . - . ID=gene-SO06_RS01055;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=SO06_RS01055 NZ_MYDG01000001.1 Protein Homology CDS 214036 215154 . - 0 ID=cds-WP_000758335.1;Parent=gene-SO06_RS01055;Dbxref=GenBank:WP_000758335.1;Name=WP_000758335.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=SO06_RS01055;product=porin OmpC;protein_id=WP_000758335.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 215870 216412 . + . ID=gene-SO06_RS01060;Name=SO06_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01060 NZ_MYDG01000001.1 Protein Homology CDS 215870 216412 . + 0 ID=cds-WP_048348844.1;Parent=gene-SO06_RS01060;Dbxref=GenBank:WP_048348844.1;Name=WP_048348844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=SO06_RS01060;product=YybH family protein;protein_id=WP_048348844.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 216468 217382 . - . ID=gene-SO06_RS01065;Name=SO06_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01065 NZ_MYDG01000001.1 Protein Homology CDS 216468 217382 . - 0 ID=cds-WP_001670736.1;Parent=gene-SO06_RS01065;Dbxref=GenBank:WP_001670736.1;Name=WP_001670736.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=SO06_RS01065;product=bestrophin family protein;protein_id=WP_001670736.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 217638 217997 . - . ID=gene-SO06_RS01070;Name=SO06_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01070 NZ_MYDG01000001.1 Protein Homology CDS 217638 217997 . - 0 ID=cds-WP_023232273.1;Parent=gene-SO06_RS01070;Dbxref=GenBank:WP_023232273.1;Name=WP_023232273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=SO06_RS01070;product=DUF4186 domain-containing protein;protein_id=WP_023232273.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 217997 218923 . - . ID=gene-SO06_RS01075;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=SO06_RS01075 NZ_MYDG01000001.1 Protein Homology CDS 217997 218923 . - 0 ID=cds-WP_023232274.1;Parent=gene-SO06_RS01075;Dbxref=GenBank:WP_023232274.1;Name=WP_023232274.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=SO06_RS01075;product=glutaminase B;protein_id=WP_023232274.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 218996 220384 . - . ID=gene-SO06_RS01080;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=SO06_RS01080 NZ_MYDG01000001.1 Protein Homology CDS 218996 220384 . - 0 ID=cds-WP_080204151.1;Parent=gene-SO06_RS01080;Dbxref=GenBank:WP_080204151.1;Name=WP_080204151.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=SO06_RS01080;product=succinate-semialdehyde dehydrogenase;protein_id=WP_080204151.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 220487 221359 . + . ID=gene-SO06_RS01085;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=SO06_RS01085 NZ_MYDG01000001.1 Protein Homology CDS 220487 221359 . + 0 ID=cds-WP_000366539.1;Parent=gene-SO06_RS01085;Dbxref=GenBank:WP_000366539.1;Name=WP_000366539.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=SO06_RS01085;product=putrescine utilization regulator PtrR;protein_id=WP_000366539.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 221475 222665 . + . ID=gene-SO06_RS01090;Name=SO06_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01090 NZ_MYDG01000001.1 Protein Homology CDS 221475 222665 . + 0 ID=cds-WP_000154617.1;Parent=gene-SO06_RS01090;Dbxref=GenBank:WP_000154617.1;Name=WP_000154617.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=SO06_RS01090;product=sugar transporter;protein_id=WP_000154617.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 222712 223377 . - . ID=gene-SO06_RS01095;Name=SO06_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01095 NZ_MYDG01000001.1 Protein Homology CDS 222712 223377 . - 0 ID=cds-WP_000968968.1;Parent=gene-SO06_RS01095;Dbxref=GenBank:WP_000968968.1;Name=WP_000968968.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=SO06_RS01095;product=MarC family NAAT transporter;protein_id=WP_000968968.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 223636 224070 . + . ID=gene-SO06_RS01100;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=SO06_RS01100 NZ_MYDG01000001.1 Protein Homology CDS 223636 224070 . + 0 ID=cds-WP_000843434.1;Parent=gene-SO06_RS01100;Dbxref=GenBank:WP_000843434.1;Name=WP_000843434.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=SO06_RS01100;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843434.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 224090 224473 . + . ID=gene-SO06_RS01105;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=SO06_RS01105 NZ_MYDG01000001.1 Protein Homology CDS 224090 224473 . + 0 ID=cds-WP_000091194.1;Parent=gene-SO06_RS01105;Dbxref=GenBank:WP_000091194.1;Name=WP_000091194.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=SO06_RS01105;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091194.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 224502 224717 . + . ID=gene-SO06_RS01110;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=SO06_RS01110 NZ_MYDG01000001.1 Protein Homology CDS 224502 224717 . + 0 ID=cds-WP_000783049.1;Parent=gene-SO06_RS01110;Dbxref=GenBank:WP_000783049.1;Name=WP_000783049.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=SO06_RS01110;product=multiple antibiotic resistance protein MarB;protein_id=WP_000783049.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 224836 225738 . - . ID=gene-SO06_RS01115;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=SO06_RS01115 NZ_MYDG01000001.1 Protein Homology CDS 224836 225738 . - 0 ID=cds-WP_072103659.1;Parent=gene-SO06_RS01115;Dbxref=GenBank:WP_072103659.1;Name=WP_072103659.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=SO06_RS01115;product=O-acetylserine/cysteine exporter;protein_id=WP_072103659.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 225966 227153 . + . ID=gene-SO06_RS01120;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=SO06_RS01120 NZ_MYDG01000001.1 Protein Homology CDS 225966 227153 . + 0 ID=cds-WP_001068050.1;Parent=gene-SO06_RS01120;Dbxref=GenBank:WP_001068050.1;Name=WP_001068050.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=SO06_RS01120;product=efflux MFS transporter YdeE;protein_id=WP_001068050.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 227401 227496 . + . ID=gene-SO06_RS24885;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=SO06_RS24885 NZ_MYDG01000001.1 Protein Homology CDS 227401 227496 . + 0 ID=cds-WP_000901531.1;Parent=gene-SO06_RS24885;Dbxref=GenBank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=SO06_RS24885;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 227844 228236 . - . ID=gene-SO06_RS01125;Name=SO06_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01125 NZ_MYDG01000001.1 Protein Homology CDS 227844 228236 . - 0 ID=cds-WP_000776348.1;Parent=gene-SO06_RS01125;Dbxref=GenBank:WP_000776348.1;Name=WP_000776348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=SO06_RS01125;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000776348.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 228619 229146 . + . ID=gene-SO06_RS01130;Name=SO06_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01130 NZ_MYDG01000001.1 Protein Homology CDS 228619 229146 . + 0 ID=cds-WP_001235357.1;Parent=gene-SO06_RS01130;Dbxref=GenBank:WP_001235357.1;Name=WP_001235357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=SO06_RS01130;product=2-oxo-tetronate isomerase;protein_id=WP_001235357.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 229266 229448 . - . ID=gene-SO06_RS01135;Name=SO06_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01135 NZ_MYDG01000001.1 Protein Homology CDS 229266 229448 . - 0 ID=cds-WP_000807642.1;Parent=gene-SO06_RS01135;Dbxref=GenBank:WP_000807642.1;Name=WP_000807642.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=SO06_RS01135;product=general stress protein;protein_id=WP_000807642.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 229793 231835 . - . ID=gene-SO06_RS01145;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=SO06_RS01145 NZ_MYDG01000001.1 Protein Homology CDS 229793 231835 . - 0 ID=cds-WP_080204152.1;Parent=gene-SO06_RS01145;Dbxref=GenBank:WP_080204152.1;Name=WP_080204152.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=SO06_RS01145;product=peptidyl-dipeptidase Dcp;protein_id=WP_080204152.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 231974 232720 . + . ID=gene-SO06_RS01150;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=SO06_RS01150 NZ_MYDG01000001.1 Protein Homology CDS 231974 232720 . + 0 ID=cds-WP_000636564.1;Parent=gene-SO06_RS01150;Dbxref=GenBank:WP_000636564.1;Name=WP_000636564.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=SO06_RS01150;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636564.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 232850 233536 . + . ID=gene-SO06_RS01155;Name=SO06_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01155 NZ_MYDG01000001.1 Protein Homology CDS 232850 233536 . + 0 ID=cds-WP_000215562.1;Parent=gene-SO06_RS01155;Dbxref=GenBank:WP_000215562.1;Name=WP_000215562.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=SO06_RS01155;product=GntR family transcriptional regulator;protein_id=WP_000215562.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 233718 233921 . + . ID=gene-SO06_RS01160;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=SO06_RS01160 NZ_MYDG01000001.1 Protein Homology CDS 233718 233921 . + 0 ID=cds-WP_000989267.1;Parent=gene-SO06_RS01160;Dbxref=GenBank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=SO06_RS01160;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 233988 235454 . - . ID=gene-SO06_RS01165;Name=SO06_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01165 NZ_MYDG01000001.1 Protein Homology CDS 233988 235454 . - 0 ID=cds-WP_023231933.1;Parent=gene-SO06_RS01165;Dbxref=GenBank:WP_023231933.1;Name=WP_023231933.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=SO06_RS01165;product=mannitol dehydrogenase family protein;protein_id=WP_023231933.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 235598 236977 . - . ID=gene-SO06_RS01170;Name=SO06_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01170 NZ_MYDG01000001.1 Protein Homology CDS 235598 236977 . - 0 ID=cds-WP_000192118.1;Parent=gene-SO06_RS01170;Dbxref=GenBank:WP_000192118.1;Name=WP_000192118.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=SO06_RS01170;product=MFS transporter;protein_id=WP_000192118.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 237031 238050 . - . ID=gene-SO06_RS01175;Name=SO06_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01175 NZ_MYDG01000001.1 Protein Homology CDS 237031 238050 . - 0 ID=cds-WP_023231934.1;Parent=gene-SO06_RS01175;Dbxref=GenBank:WP_023231934.1;Name=WP_023231934.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=SO06_RS01175;product=Zn-dependent oxidoreductase;protein_id=WP_023231934.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 238061 239275 . - . ID=gene-SO06_RS01180;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=SO06_RS01180 NZ_MYDG01000001.1 Protein Homology CDS 238061 239275 . - 0 ID=cds-WP_000706265.1;Parent=gene-SO06_RS01180;Dbxref=GenBank:WP_000706265.1;Name=WP_000706265.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=SO06_RS01180;product=starvation-sensing protein RspA;protein_id=WP_000706265.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 239397 239723 . - . ID=gene-SO06_RS01185;Name=SO06_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01185 NZ_MYDG01000001.1 Protein Homology CDS 239397 239723 . - 0 ID=cds-WP_000921389.1;Parent=gene-SO06_RS01185;Dbxref=GenBank:WP_000921389.1;Name=WP_000921389.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=SO06_RS01185;product=YnfA family protein;protein_id=WP_000921389.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 239876 240217 . + . ID=gene-SO06_RS01190;Name=SO06_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01190 NZ_MYDG01000001.1 Protein Homology CDS 239876 240217 . + 0 ID=cds-WP_001066440.1;Parent=gene-SO06_RS01190;Dbxref=GenBank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=SO06_RS01190;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 240253 240813 . + . ID=gene-SO06_RS01195;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=SO06_RS01195 NZ_MYDG01000001.1 Protein Homology CDS 240253 240813 . + 0 ID=cds-WP_000199997.1;Parent=gene-SO06_RS01195;Dbxref=GenBank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=SO06_RS01195;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 240854 241564 . - . ID=gene-SO06_RS01200;Name=SO06_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01200 NZ_MYDG01000001.1 Protein Homology CDS 240854 241564 . - 0 ID=cds-WP_000743122.1;Parent=gene-SO06_RS01200;Dbxref=GenBank:WP_000743122.1;Name=WP_000743122.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=SO06_RS01200;product=YnfC family lipoprotein;protein_id=WP_000743122.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 241668 241976 . + . ID=gene-SO06_RS01205;Name=SO06_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01205 NZ_MYDG01000001.1 Protein Homology CDS 241668 241976 . + 0 ID=cds-WP_000975516.1;Parent=gene-SO06_RS01205;Dbxref=GenBank:WP_000975516.1;Name=WP_000975516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=SO06_RS01205;product=DUF1161 domain-containing protein;protein_id=WP_000975516.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 242133 244571 . + . ID=gene-SO06_RS01210;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=SO06_RS01210 NZ_MYDG01000001.1 Protein Homology CDS 242133 244571 . + 0 ID=cds-WP_048348846.1;Parent=gene-SO06_RS01210;Dbxref=GenBank:WP_048348846.1;Name=WP_048348846.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=SO06_RS01210;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_048348846.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 244670 247105 . + . ID=gene-SO06_RS01215;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=SO06_RS01215 NZ_MYDG01000001.1 Protein Homology CDS 244670 247105 . + 0 ID=cds-WP_023232513.1;Parent=gene-SO06_RS01215;Dbxref=GenBank:WP_023232513.1;Name=WP_023232513.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=SO06_RS01215;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_023232513.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 247116 247733 . + . ID=gene-SO06_RS01220;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=SO06_RS01220 NZ_MYDG01000001.1 Protein Homology CDS 247116 247733 . + 0 ID=cds-WP_000213069.1;Parent=gene-SO06_RS01220;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=SO06_RS01220;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 247735 248592 . + . ID=gene-SO06_RS01225;Name=SO06_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01225 NZ_MYDG01000001.1 Protein Homology CDS 247735 248592 . + 0 ID=cds-WP_048348847.1;Parent=gene-SO06_RS01225;Dbxref=GenBank:WP_048348847.1;Name=WP_048348847.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=SO06_RS01225;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_048348847.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 248635 249249 . + . ID=gene-SO06_RS01230;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=SO06_RS01230 NZ_MYDG01000001.1 Protein Homology CDS 248635 249249 . + 0 ID=cds-WP_000206571.1;Parent=gene-SO06_RS01230;Dbxref=GenBank:WP_000206571.1;Name=WP_000206571.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=SO06_RS01230;product=Tat proofreading chaperone DmsD;protein_id=WP_000206571.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 249554 250264 . + . ID=gene-SO06_RS01235;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=SO06_RS01235 NZ_MYDG01000001.1 Protein Homology CDS 249554 250264 . + 0 ID=cds-WP_000557304.1;Parent=gene-SO06_RS01235;Dbxref=GenBank:WP_000557304.1;Name=WP_000557304.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=SO06_RS01235;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_000557304.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 250293 251195 . + . ID=gene-SO06_RS01240;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=SO06_RS01240 NZ_MYDG01000001.1 Protein Homology CDS 250293 251195 . + 0 ID=cds-WP_001211193.1;Parent=gene-SO06_RS01240;Dbxref=GenBank:WP_001211193.1;Name=WP_001211193.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=SO06_RS01240;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_001211193.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 251205 251852 . + . ID=gene-SO06_RS01245;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=SO06_RS01245 NZ_MYDG01000001.1 Protein Homology CDS 251205 251852 . + 0 ID=cds-WP_000379677.1;Parent=gene-SO06_RS01245;Dbxref=GenBank:WP_000379677.1;Name=WP_000379677.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=SO06_RS01245;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379677.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 251852 253000 . + . ID=gene-SO06_RS01250;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=SO06_RS01250 NZ_MYDG01000001.1 Protein Homology CDS 251852 253000 . + 0 ID=cds-WP_000593088.1;Parent=gene-SO06_RS01250;Dbxref=GenBank:WP_000593088.1;Name=WP_000593088.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=SO06_RS01250;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_000593088.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 253136 254425 . + . ID=gene-SO06_RS01255;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=SO06_RS01255 NZ_MYDG01000001.1 Protein Homology CDS 253136 254425 . + 0 ID=cds-WP_000554909.1;Parent=gene-SO06_RS01255;Dbxref=GenBank:WP_000554909.1;Name=WP_000554909.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=SO06_RS01255;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_000554909.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 254381 255076 . - . ID=gene-SO06_RS01260;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=SO06_RS01260 NZ_MYDG01000001.1 Protein Homology CDS 254381 255076 . - 0 ID=cds-WP_000919206.1;Parent=gene-SO06_RS01260;Dbxref=GenBank:WP_000919206.1;Name=WP_000919206.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=SO06_RS01260;product=dethiobiotin synthase;protein_id=WP_000919206.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 255202 256422 . - . ID=gene-SO06_RS01265;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=SO06_RS01265 NZ_MYDG01000001.1 Protein Homology CDS 255202 256422 . - 0 ID=cds-WP_000225093.1;Parent=gene-SO06_RS01265;Dbxref=GenBank:WP_000225093.1;Name=WP_000225093.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=SO06_RS01265;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225093.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 256550 257449 . - . ID=gene-SO06_RS01275;Name=SO06_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01275 NZ_MYDG01000001.1 Protein Homology CDS 256550 257449 . - 0 ID=cds-WP_001019577.1;Parent=gene-SO06_RS01275;Dbxref=GenBank:WP_001019577.1;Name=WP_001019577.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=SO06_RS01275;product=LysR family transcriptional regulator;protein_id=WP_001019577.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 257569 258822 . + . ID=gene-SO06_RS01280;Name=SO06_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01280 NZ_MYDG01000001.1 Protein Homology CDS 257569 258822 . + 0 ID=cds-WP_000091796.1;Parent=gene-SO06_RS01280;Dbxref=GenBank:WP_000091796.1;Name=WP_000091796.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=SO06_RS01280;product=MFS transporter;protein_id=WP_000091796.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 258889 258981 . - . ID=gene-SO06_RS25335;Name=SO06_RS25335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25335 NZ_MYDG01000001.1 Protein Homology CDS 258889 258981 . - 0 ID=cds-WP_001068154.1;Parent=gene-SO06_RS25335;Dbxref=GenBank:WP_001068154.1;Name=WP_001068154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=SO06_RS25335;product=KPN_01571 family protein;protein_id=WP_001068154.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 259217 259468 . + . ID=gene-SO06_RS01285;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=SO06_RS01285 NZ_MYDG01000001.1 Protein Homology CDS 259217 259468 . + 0 ID=cds-WP_023231952.1;Parent=gene-SO06_RS01285;Dbxref=GenBank:WP_023231952.1;Name=WP_023231952.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=SO06_RS01285;product=acid resistance repetitive basic protein Asr;protein_id=WP_023231952.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 259737 260558 . + . ID=gene-SO06_RS01290;Name=SO06_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01290 NZ_MYDG01000001.1 Protein Homology CDS 259737 260558 . + 0 ID=cds-WP_000549649.1;Parent=gene-SO06_RS01290;Dbxref=GenBank:WP_000549649.1;Name=WP_000549649.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=SO06_RS01290;product=trypsin-like serine peptidase;protein_id=WP_000549649.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 260593 260922 . - . ID=gene-SO06_RS01295;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=SO06_RS01295 NZ_MYDG01000001.1 Protein Homology CDS 260593 260922 . - 0 ID=cds-WP_001183821.1;Parent=gene-SO06_RS01295;Dbxref=GenBank:WP_001183821.1;Name=WP_001183821.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=SO06_RS01295;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_001183821.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 260909 261271 . - . ID=gene-SO06_RS01300;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=SO06_RS01300 NZ_MYDG01000001.1 Protein Homology CDS 260909 261271 . - 0 ID=cds-WP_000500278.1;Parent=gene-SO06_RS01300;Dbxref=GenBank:WP_000500278.1;Name=WP_000500278.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=SO06_RS01300;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000500278.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 261383 261553 . - . ID=gene-SO06_RS25740;Name=SO06_RS25740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25740 NZ_MYDG01000001.1 Protein Homology CDS 261383 261553 . - 0 ID=cds-WP_001539987.1;Parent=gene-SO06_RS25740;Dbxref=GenBank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=SO06_RS25740;product=protein YdgV;protein_id=WP_001539987.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 261689 262723 . + . ID=gene-SO06_RS01310;Name=SO06_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01310 NZ_MYDG01000001.1 Protein Homology CDS 261689 262723 . + 0 ID=cds-WP_001118268.1;Parent=gene-SO06_RS01310;Dbxref=GenBank:WP_001118268.1;Name=WP_001118268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=SO06_RS01310;product=AI-2E family transporter;protein_id=WP_001118268.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 262898 264286 . - . ID=gene-SO06_RS01315;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=SO06_RS01315 NZ_MYDG01000001.1 Protein Homology CDS 262898 264286 . - 0 ID=cds-WP_000014056.1;Parent=gene-SO06_RS01315;Dbxref=GenBank:WP_000014056.1;Name=WP_000014056.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=SO06_RS01315;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014056.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 264297 265826 . - . ID=gene-SO06_RS01320;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=SO06_RS01320 NZ_MYDG01000001.1 Protein Homology CDS 264297 265826 . - 0 ID=cds-WP_001219362.1;Parent=gene-SO06_RS01320;Dbxref=GenBank:WP_001219362.1;Name=WP_001219362.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=SO06_RS01320;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001219362.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 266353 267297 . + . ID=gene-SO06_RS01325;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=SO06_RS01325 NZ_MYDG01000001.1 Protein Homology CDS 266353 267297 . + 0 ID=cds-WP_000769294.1;Parent=gene-SO06_RS01325;Dbxref=GenBank:WP_000769294.1;Name=WP_000769294.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=SO06_RS01325;product=DUF1471 family protein YdgH;protein_id=WP_000769294.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 267596 268978 . + . ID=gene-SO06_RS01330;Name=SO06_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01330 NZ_MYDG01000001.1 Protein Homology CDS 267596 268978 . + 0 ID=cds-WP_000412353.1;Parent=gene-SO06_RS01330;Dbxref=GenBank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=SO06_RS01330;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 269040 269375 . - . ID=gene-SO06_RS01335;Name=SO06_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01335 NZ_MYDG01000001.1 Protein Homology CDS 269040 269375 . - 0 ID=cds-WP_000524877.1;Parent=gene-SO06_RS01335;Dbxref=GenBank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=SO06_RS01335;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 269502 270233 . + . ID=gene-SO06_RS01340;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=SO06_RS01340 NZ_MYDG01000001.1 Protein Homology CDS 269502 270233 . + 0 ID=cds-WP_001080048.1;Parent=gene-SO06_RS01340;Dbxref=GenBank:WP_001080048.1;Name=WP_001080048.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=SO06_RS01340;product=two-component system response regulator RstA;protein_id=WP_001080048.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 270713 271846 . + . ID=gene-SO06_RS01350;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=SO06_RS01350 NZ_MYDG01000001.1 Protein Homology CDS 270713 271846 . + 0 ID=cds-WP_023232588.1;Parent=gene-SO06_RS01350;Dbxref=GenBank:WP_023232588.1;Name=WP_023232588.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=SO06_RS01350;product=porin OmpC;protein_id=WP_023232588.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 271999 273705 . + . ID=gene-SO06_RS01355;Name=SO06_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01355 NZ_MYDG01000001.1 Protein Homology CDS 271999 273705 . + 0 ID=cds-WP_072103658.1;Parent=gene-SO06_RS01355;Dbxref=GenBank:WP_072103658.1;Name=WP_072103658.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=SO06_RS01355;product=amidohydrolase;protein_id=WP_072103658.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 273816 275117 . + . ID=gene-SO06_RS01360;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=SO06_RS01360 NZ_MYDG01000001.1 Protein Homology CDS 273816 275117 . + 0 ID=cds-WP_000732951.1;Parent=gene-SO06_RS01360;Dbxref=GenBank:WP_000732951.1;Name=WP_000732951.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=SO06_RS01360;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732951.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 275193 276122 . + . ID=gene-SO06_RS01365;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=SO06_RS01365 NZ_MYDG01000001.1 Protein Homology CDS 275193 276122 . + 0 ID=cds-WP_000092489.1;Parent=gene-SO06_RS01365;Dbxref=GenBank:WP_000092489.1;Name=WP_000092489.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=SO06_RS01365;product=DNA replication terminus site-binding protein;protein_id=WP_000092489.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 276119 277522 . - . ID=gene-SO06_RS01370;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=SO06_RS01370 NZ_MYDG01000001.1 Protein Homology CDS 276119 277522 . - 0 ID=cds-WP_000259117.1;Parent=gene-SO06_RS01370;Dbxref=GenBank:WP_000259117.1;Name=WP_000259117.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=SO06_RS01370;product=class II fumarate hydratase;protein_id=WP_000259117.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 277690 279336 . - . ID=gene-SO06_RS01375;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=SO06_RS01375 NZ_MYDG01000001.1 Protein Homology CDS 277690 279336 . - 0 ID=cds-WP_000066611.1;Parent=gene-SO06_RS01375;Dbxref=GenBank:WP_000066611.1;Name=WP_000066611.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=SO06_RS01375;product=class I fumarate hydratase;protein_id=WP_000066611.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 279536 280711 . + . ID=gene-SO06_RS01380;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=SO06_RS01380 NZ_MYDG01000001.1 Protein Homology CDS 279536 280711 . + 0 ID=cds-WP_001170622.1;Parent=gene-SO06_RS01380;Dbxref=GenBank:WP_001170622.1;Name=WP_001170622.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=SO06_RS01380;product=mannose-6-phosphate isomerase;protein_id=WP_001170622.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 280814 282322 . + . ID=gene-SO06_RS01385;Name=SO06_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01385 NZ_MYDG01000001.1 Protein Homology CDS 280814 282322 . + 0 ID=cds-WP_000753328.1;Parent=gene-SO06_RS01385;Dbxref=GenBank:WP_000753328.1;Name=WP_000753328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=SO06_RS01385;product=YdgA family protein;protein_id=WP_000753328.1;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 282380 282982 . - . ID=gene-SO06_RS01390;Name=malI;end_range=282982,.;gbkey=Gene;gene=malI;gene_biotype=pseudogene;locus_tag=SO06_RS01390;partial=true;pseudo=true NZ_MYDG01000001.1 Protein Homology CDS 282380 282982 . - 0 ID=cds-SO06_RS01390;Parent=gene-SO06_RS01390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677;end_range=282982,.;gbkey=CDS;gene=malI;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=SO06_RS01390;partial=true;product=Mal regulon transcriptional regulator MalI;pseudo=true;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 283001 283375 . + . ID=gene-SO06_RS01395;Name=SO06_RS01395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS01395;partial=true;pseudo=true;start_range=.,283001 NZ_MYDG01000001.1 Protein Homology CDS 283001 283375 . + 0 ID=cds-SO06_RS01395;Parent=gene-SO06_RS01395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=SO06_RS01395;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;start_range=.,283001;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 283593 284594 . + . ID=gene-SO06_RS01400;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=SO06_RS01400 NZ_MYDG01000001.1 Protein Homology CDS 283593 284594 . + 0 ID=cds-WP_000565565.1;Parent=gene-SO06_RS01400;Dbxref=GenBank:WP_000565565.1;Name=WP_000565565.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=SO06_RS01400;product=adenosine deaminase;protein_id=WP_000565565.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 284669 285709 . - . ID=gene-SO06_RS01405;Name=SO06_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01405 NZ_MYDG01000001.1 Protein Homology CDS 284669 285709 . - 0 ID=cds-WP_000998242.1;Parent=gene-SO06_RS01405;Dbxref=GenBank:WP_000998242.1;Name=WP_000998242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=SO06_RS01405;product=oxidoreductase;protein_id=WP_000998242.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 285917 286042 . + . ID=gene-SO06_RS01410;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=SO06_RS01410 NZ_MYDG01000001.1 Protein Homology CDS 285917 286042 . + 0 ID=cds-WP_001708800.1;Parent=gene-SO06_RS01410;Dbxref=GenBank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=SO06_RS01410;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 286340 286555 . + . ID=gene-SO06_RS01415;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=SO06_RS01415 NZ_MYDG01000001.1 Protein Homology CDS 286340 286555 . + 0 ID=cds-WP_000217946.1;Parent=gene-SO06_RS01415;Dbxref=GenBank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=SO06_RS01415;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 286644 287084 . + . ID=gene-SO06_RS01420;Name=SO06_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01420 NZ_MYDG01000001.1 Protein Homology CDS 286644 287084 . + 0 ID=cds-WP_023232210.1;Parent=gene-SO06_RS01420;Dbxref=GenBank:WP_023232210.1;Name=WP_023232210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=SO06_RS01420;product=DUF2569 domain-containing protein;protein_id=WP_023232210.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 287161 287742 . + . ID=gene-SO06_RS01425;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=SO06_RS01425 NZ_MYDG01000001.1 Protein Homology CDS 287161 287742 . + 0 ID=cds-WP_000133179.1;Parent=gene-SO06_RS01425;Dbxref=GenBank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=SO06_RS01425;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 287742 288320 . + . ID=gene-SO06_RS01430;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=SO06_RS01430 NZ_MYDG01000001.1 Protein Homology CDS 287742 288320 . + 0 ID=cds-WP_001092600.1;Parent=gene-SO06_RS01430;Dbxref=GenBank:WP_001092600.1;Name=WP_001092600.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=SO06_RS01430;product=electron transport complex subunit RsxB;protein_id=WP_001092600.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 288313 290427 . + . ID=gene-SO06_RS01435;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=SO06_RS01435 NZ_MYDG01000001.1 Protein Homology CDS 288313 290427 . + 0 ID=cds-WP_052908348.1;Parent=gene-SO06_RS01435;Dbxref=GenBank:WP_052908348.1;Name=WP_052908348.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=SO06_RS01435;product=electron transport complex subunit RsxC;protein_id=WP_052908348.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 290428 291486 . + . ID=gene-SO06_RS01440;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=SO06_RS01440 NZ_MYDG01000001.1 Protein Homology CDS 290428 291486 . + 0 ID=cds-WP_023258494.1;Parent=gene-SO06_RS01440;Dbxref=GenBank:WP_023258494.1;Name=WP_023258494.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=SO06_RS01440;product=electron transport complex subunit RsxD;protein_id=WP_023258494.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 291490 292110 . + . ID=gene-SO06_RS01445;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=SO06_RS01445 NZ_MYDG01000001.1 Protein Homology CDS 291490 292110 . + 0 ID=cds-WP_000920822.1;Parent=gene-SO06_RS01445;Dbxref=GenBank:WP_000920822.1;Name=WP_000920822.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=SO06_RS01445;product=electron transport complex subunit RsxG;protein_id=WP_000920822.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 292113 292805 . + . ID=gene-SO06_RS01450;Name=SO06_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01450 NZ_MYDG01000001.1 Protein Homology CDS 292113 292805 . + 0 ID=cds-WP_023232038.1;Parent=gene-SO06_RS01450;Dbxref=GenBank:WP_023232038.1;Name=WP_023232038.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=SO06_RS01450;product=electron transport complex subunit E;protein_id=WP_023232038.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 292805 293440 . + . ID=gene-SO06_RS01455;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=SO06_RS01455 NZ_MYDG01000001.1 Protein Homology CDS 292805 293440 . + 0 ID=cds-WP_001030325.1;Parent=gene-SO06_RS01455;Dbxref=GenBank:WP_001030325.1;Name=WP_001030325.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=SO06_RS01455;product=endonuclease III;protein_id=WP_001030325.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 294042 295547 . + . ID=gene-SO06_RS01460;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=SO06_RS01460 NZ_MYDG01000001.1 Protein Homology CDS 294042 295547 . + 0 ID=cds-WP_000100911.1;Parent=gene-SO06_RS01460;Dbxref=GenBank:WP_000100911.1;Name=WP_000100911.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=SO06_RS01460;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100911.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 295652 296257 . + . ID=gene-SO06_RS01465;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=SO06_RS01465 NZ_MYDG01000001.1 Protein Homology CDS 295652 296257 . + 0 ID=cds-WP_000765727.1;Parent=gene-SO06_RS01465;Dbxref=GenBank:WP_000765727.1;Name=WP_000765727.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=SO06_RS01465;product=glutathione transferase GstA;protein_id=WP_000765727.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 296316 297176 . - . ID=gene-SO06_RS01470;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=SO06_RS01470 NZ_MYDG01000001.1 Protein Homology CDS 296316 297176 . - 0 ID=cds-WP_000789736.1;Parent=gene-SO06_RS01470;Dbxref=GenBank:WP_000789736.1;Name=WP_000789736.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=SO06_RS01470;product=pyridoxal kinase PdxY;protein_id=WP_000789736.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 297236 298510 . - . ID=gene-SO06_RS01475;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=SO06_RS01475 NZ_MYDG01000001.1 Protein Homology CDS 297236 298510 . - 0 ID=cds-WP_000168626.1;Parent=gene-SO06_RS01475;Dbxref=GenBank:WP_000168626.1;Name=WP_000168626.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=SO06_RS01475;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 298637 299293 . - . ID=gene-SO06_RS01480;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=SO06_RS01480 NZ_MYDG01000001.1 Protein Homology CDS 298637 299293 . - 0 ID=cds-WP_001282334.1;Parent=gene-SO06_RS01480;Dbxref=GenBank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=SO06_RS01480;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 299352 299681 . - . ID=gene-SO06_RS01485;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=SO06_RS01485 NZ_MYDG01000001.1 Protein Homology CDS 299352 299681 . - 0 ID=cds-WP_001132091.1;Parent=gene-SO06_RS01485;Dbxref=GenBank:WP_001132091.1;Name=WP_001132091.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=SO06_RS01485;product=C-type lysozyme inhibitor;protein_id=WP_001132091.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 299769 300890 . - . ID=gene-SO06_RS01490;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=SO06_RS01490 NZ_MYDG01000001.1 Protein Homology CDS 299769 300890 . - 0 ID=cds-WP_000835020.1;Parent=gene-SO06_RS01490;Dbxref=GenBank:WP_000835020.1;Name=WP_000835020.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=SO06_RS01490;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835020.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 301163 301630 . + . ID=gene-SO06_RS01495;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=SO06_RS01495 NZ_MYDG01000001.1 Protein Homology CDS 301163 301630 . + 0 ID=cds-WP_000597179.1;Parent=gene-SO06_RS01495;Dbxref=GenBank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=SO06_RS01495;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 301678 302118 . - . ID=gene-SO06_RS01500;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=SO06_RS01500 NZ_MYDG01000001.1 Protein Homology CDS 301678 302118 . - 0 ID=cds-WP_000764552.1;Parent=gene-SO06_RS01500;Dbxref=GenBank:WP_000764552.1;Name=WP_000764552.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=SO06_RS01500;product=transcriptional regulator SlyA;protein_id=WP_000764552.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 302313 302549 . + . ID=gene-SO06_RS01505;Name=SO06_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01505 NZ_MYDG01000001.1 Protein Homology CDS 302313 302549 . + 0 ID=cds-WP_000649755.1;Parent=gene-SO06_RS01505;Dbxref=GenBank:WP_000649755.1;Name=WP_000649755.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=SO06_RS01505;product=DUF1656 domain-containing protein;protein_id=WP_000649755.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 302552 303412 . + . ID=gene-SO06_RS01510;Name=SO06_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01510 NZ_MYDG01000001.1 Protein Homology CDS 302552 303412 . + 0 ID=cds-WP_001531609.1;Parent=gene-SO06_RS01510;Dbxref=GenBank:WP_001531609.1;Name=WP_001531609.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=SO06_RS01510;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001531609.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 303412 305451 . + . ID=gene-SO06_RS01515;Name=SO06_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01515 NZ_MYDG01000001.1 Protein Homology CDS 303412 305451 . + 0 ID=cds-WP_023217065.1;Parent=gene-SO06_RS01515;Dbxref=GenBank:WP_023217065.1;Name=WP_023217065.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=SO06_RS01515;product=FUSC family protein;protein_id=WP_023217065.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 305427 305948 . - . ID=gene-SO06_RS01520;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=SO06_RS01520 NZ_MYDG01000001.1 Protein Homology CDS 305427 305948 . - 0 ID=cds-WP_000826828.1;Parent=gene-SO06_RS01520;Dbxref=GenBank:WP_000826828.1;Name=WP_000826828.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=SO06_RS01520;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826828.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 306028 306924 . - . ID=gene-SO06_RS01525;Name=SO06_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01525 NZ_MYDG01000001.1 Protein Homology CDS 306028 306924 . - 0 ID=cds-WP_000250721.1;Parent=gene-SO06_RS01525;Dbxref=GenBank:WP_000250721.1;Name=WP_000250721.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=SO06_RS01525;product=aldo/keto reductase;protein_id=WP_000250721.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 306975 307214 . - . ID=gene-SO06_RS01530;Name=SO06_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01530 NZ_MYDG01000001.1 Protein Homology CDS 306975 307214 . - 0 ID=cds-WP_001538148.1;Parent=gene-SO06_RS01530;Dbxref=GenBank:WP_001538148.1;Name=WP_001538148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=SO06_RS01530;product=DUF1289 domain-containing protein;protein_id=WP_001538148.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 307317 307916 . + . ID=gene-SO06_RS01535;Name=SO06_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01535 NZ_MYDG01000001.1 Protein Homology CDS 307317 307916 . + 0 ID=cds-WP_001041823.1;Parent=gene-SO06_RS01535;Dbxref=GenBank:WP_001041823.1;Name=WP_001041823.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=SO06_RS01535;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001041823.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 307975 309072 . + . ID=gene-SO06_RS01540;Name=SO06_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01540 NZ_MYDG01000001.1 Protein Homology CDS 307975 309072 . + 0 ID=cds-WP_000092935.1;Parent=gene-SO06_RS01540;Dbxref=GenBank:WP_000092935.1;Name=WP_000092935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=SO06_RS01540;product=alkene reductase;protein_id=WP_000092935.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 309141 309548 . + . ID=gene-SO06_RS01545;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=SO06_RS01545 NZ_MYDG01000001.1 Protein Homology CDS 309141 309548 . + 0 ID=cds-WP_001237787.1;Parent=gene-SO06_RS01545;Dbxref=GenBank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=SO06_RS01545;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 309649 310296 . + . ID=gene-SO06_RS01550;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=SO06_RS01550 NZ_MYDG01000001.1 Protein Homology CDS 309649 310296 . + 0 ID=cds-WP_001282272.1;Parent=gene-SO06_RS01550;Dbxref=GenBank:WP_001282272.1;Name=WP_001282272.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=SO06_RS01550;product=ribonuclease T;protein_id=WP_001282272.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 310374 310721 . - . ID=gene-SO06_RS01560;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=SO06_RS01560 NZ_MYDG01000001.1 Protein Homology CDS 310374 310721 . - 0 ID=cds-WP_000108176.1;Parent=gene-SO06_RS01560;Dbxref=GenBank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=SO06_RS01560;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 311056 311877 . + . ID=gene-SO06_RS01565;Name=SO06_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01565 NZ_MYDG01000001.1 Protein Homology CDS 311056 311877 . + 0 ID=cds-WP_217805363.1;Parent=gene-SO06_RS01565;Dbxref=GenBank:WP_217805363.1;Name=WP_217805363.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=SO06_RS01565;product=C40 family peptidase;protein_id=WP_217805363.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 312004 312585 . + . ID=gene-SO06_RS01570;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=SO06_RS01570 NZ_MYDG01000001.1 Protein Homology CDS 312004 312585 . + 0 ID=cds-WP_000007299.1;Parent=gene-SO06_RS01570;Dbxref=GenBank:WP_000007299.1;Name=WP_000007299.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=SO06_RS01570;product=superoxide dismutase [Fe];protein_id=WP_000007299.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 312667 312756 . - . ID=gene-SO06_RS24895;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=SO06_RS24895 NZ_MYDG01000001.1 Protein Homology CDS 312667 312756 . - 0 ID=cds-WP_139777304.1;Parent=gene-SO06_RS24895;Dbxref=GenBank:WP_139777304.1;Name=WP_139777304.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=SO06_RS24895;product=cytochrome bd-I oxidase subunit CydH;protein_id=WP_139777304.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 313052 314077 . + . ID=gene-SO06_RS01580;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=SO06_RS01580 NZ_MYDG01000001.1 Protein Homology CDS 313052 314077 . + 0 ID=cds-WP_000190992.1;Parent=gene-SO06_RS01580;Dbxref=GenBank:WP_000190992.1;Name=WP_000190992.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=SO06_RS01580;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190992.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 314074 315006 . - . ID=gene-SO06_RS01585;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=SO06_RS01585 NZ_MYDG01000001.1 Protein Homology CDS 314074 315006 . - 0 ID=cds-WP_000269513.1;Parent=gene-SO06_RS01585;Dbxref=GenBank:WP_000269513.1;Name=WP_000269513.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=SO06_RS01585;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269513.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 315119 316324 . + . ID=gene-SO06_RS01590;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=SO06_RS01590 NZ_MYDG01000001.1 Protein Homology CDS 315119 316324 . + 0 ID=cds-WP_001182318.1;Parent=gene-SO06_RS01590;Dbxref=GenBank:WP_001182318.1;Name=WP_001182318.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=SO06_RS01590;product=purine nucleoside transporter PunC;protein_id=WP_001182318.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 316614 317762 . + . ID=gene-SO06_RS01595;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=SO06_RS01595 NZ_MYDG01000001.1 Protein Homology CDS 316614 317762 . + 0 ID=cds-WP_000098879.1;Parent=gene-SO06_RS01595;Dbxref=GenBank:WP_000098879.1;Name=WP_000098879.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=SO06_RS01595;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098879.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 317804 318445 . - . ID=gene-SO06_RS01600;Name=SO06_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01600 NZ_MYDG01000001.1 Protein Homology CDS 317804 318445 . - 0 ID=cds-WP_000493971.1;Parent=gene-SO06_RS01600;Dbxref=GenBank:WP_000493971.1;Name=WP_000493971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=SO06_RS01600;product=riboflavin synthase;protein_id=WP_000493971.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 318662 320035 . + . ID=gene-SO06_RS01605;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=SO06_RS01605 NZ_MYDG01000001.1 Protein Homology CDS 318662 320035 . + 0 ID=cds-WP_024148470.1;Parent=gene-SO06_RS01605;Dbxref=GenBank:WP_024148470.1;Name=WP_024148470.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=SO06_RS01605;product=multidrug efflux MATE transporter MdtK;protein_id=WP_024148470.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 320187 320263 . + . ID=gene-SO06_RS01610;Name=SO06_RS01610;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS01610 NZ_MYDG01000001.1 tRNAscan-SE tRNA 320187 320263 . + . ID=rna-SO06_RS01610;Parent=gene-SO06_RS01610;anticodon=(pos:320221..320223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS01610;product=tRNA-Val NZ_MYDG01000001.1 tRNAscan-SE exon 320187 320263 . + . ID=exon-SO06_RS01610-1;Parent=rna-SO06_RS01610;anticodon=(pos:320221..320223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS01610;product=tRNA-Val NZ_MYDG01000001.1 RefSeq gene 320274 320350 . + . ID=gene-SO06_RS01615;Name=SO06_RS01615;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS01615 NZ_MYDG01000001.1 tRNAscan-SE tRNA 320274 320350 . + . ID=rna-SO06_RS01615;Parent=gene-SO06_RS01615;anticodon=(pos:320308..320310);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS01615;product=tRNA-Val NZ_MYDG01000001.1 tRNAscan-SE exon 320274 320350 . + . ID=exon-SO06_RS01615-1;Parent=rna-SO06_RS01615;anticodon=(pos:320308..320310);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS01615;product=tRNA-Val NZ_MYDG01000001.1 RefSeq gene 320509 321567 . - . ID=gene-SO06_RS01620;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=SO06_RS01620 NZ_MYDG01000001.1 Protein Homology CDS 320509 321567 . - 0 ID=cds-WP_080204154.1;Parent=gene-SO06_RS01620;Dbxref=GenBank:WP_080204154.1;Name=WP_080204154.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=SO06_RS01620;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_080204154.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 321564 322343 . - . ID=gene-SO06_RS01625;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=SO06_RS01625 NZ_MYDG01000001.1 Protein Homology CDS 321564 322343 . - 0 ID=cds-WP_023232000.1;Parent=gene-SO06_RS01625;Dbxref=GenBank:WP_023232000.1;Name=WP_023232000.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=SO06_RS01625;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_023232000.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 322344 322610 . - . ID=gene-SO06_RS01630;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=SO06_RS01630 NZ_MYDG01000001.1 Protein Homology CDS 322344 322610 . - 0 ID=cds-WP_000999982.1;Parent=gene-SO06_RS01630;Dbxref=GenBank:WP_000999982.1;Name=WP_000999982.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=SO06_RS01630;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999982.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 322607 323254 . - . ID=gene-SO06_RS01635;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=SO06_RS01635 NZ_MYDG01000001.1 Protein Homology CDS 322607 323254 . - 0 ID=cds-WP_000056367.1;Parent=gene-SO06_RS01635;Dbxref=GenBank:WP_000056367.1;Name=WP_000056367.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=SO06_RS01635;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_000056367.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 323322 324290 . - . ID=gene-SO06_RS01640;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=SO06_RS01640 NZ_MYDG01000001.1 Protein Homology CDS 323322 324290 . - 0 ID=cds-WP_023231999.1;Parent=gene-SO06_RS01640;Dbxref=GenBank:WP_023231999.1;Name=WP_023231999.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=SO06_RS01640;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_023231999.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 324271 324645 . - . ID=gene-SO06_RS01645;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=SO06_RS01645 NZ_MYDG01000001.1 Protein Homology CDS 324271 324645 . - 0 ID=cds-WP_023231998.1;Parent=gene-SO06_RS01645;Dbxref=GenBank:WP_023231998.1;Name=WP_023231998.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=SO06_RS01645;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_023231998.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 324626 325003 . - . ID=gene-SO06_RS01650;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=SO06_RS01650 NZ_MYDG01000001.1 Protein Homology CDS 324626 325003 . - 0 ID=cds-WP_000449089.1;Parent=gene-SO06_RS01650;Dbxref=GenBank:WP_000449089.1;Name=WP_000449089.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=SO06_RS01650;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_000449089.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 325006 326307 . - . ID=gene-SO06_RS01655;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=SO06_RS01655 NZ_MYDG01000001.1 Protein Homology CDS 325006 326307 . - 0 ID=cds-WP_048348852.1;Parent=gene-SO06_RS01655;Dbxref=GenBank:WP_048348852.1;Name=WP_048348852.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=SO06_RS01655;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_048348852.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 326297 328342 . - . ID=gene-SO06_RS01660;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=SO06_RS01660 NZ_MYDG01000001.1 Protein Homology CDS 326297 328342 . - 0 ID=cds-WP_023232143.1;Parent=gene-SO06_RS01660;Dbxref=GenBank:WP_023232143.1;Name=WP_023232143.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=SO06_RS01660;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_023232143.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 328327 328695 . - . ID=gene-SO06_RS01665;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=SO06_RS01665 NZ_MYDG01000001.1 Protein Homology CDS 328327 328695 . - 0 ID=cds-WP_000383706.1;Parent=gene-SO06_RS01665;Dbxref=GenBank:WP_000383706.1;Name=WP_000383706.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=SO06_RS01665;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383706.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 328753 329769 . - . ID=gene-SO06_RS01670;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=SO06_RS01670 NZ_MYDG01000001.1 Protein Homology CDS 328753 329769 . - 0 ID=cds-WP_000238886.1;Parent=gene-SO06_RS01670;Dbxref=GenBank:WP_000238886.1;Name=WP_000238886.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=SO06_RS01670;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_000238886.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 329735 330409 . - . ID=gene-SO06_RS01675;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=SO06_RS01675 NZ_MYDG01000001.1 Protein Homology CDS 329735 330409 . - 0 ID=cds-WP_023232142.1;Parent=gene-SO06_RS01675;Dbxref=GenBank:WP_023232142.1;Name=WP_023232142.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=SO06_RS01675;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_023232142.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 330406 330954 . - . ID=gene-SO06_RS01680;Name=SO06_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01680 NZ_MYDG01000001.1 Protein Homology CDS 330406 330954 . - 0 ID=cds-WP_023199466.1;Parent=gene-SO06_RS01680;Dbxref=GenBank:WP_023199466.1;Name=WP_023199466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=SO06_RS01680;product=type III secretion system domain-containing protein;protein_id=WP_023199466.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 330972 331721 . - . ID=gene-SO06_RS01685;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=SO06_RS01685 NZ_MYDG01000001.1 Protein Homology CDS 330972 331721 . - 0 ID=cds-WP_000862878.1;Parent=gene-SO06_RS01685;Dbxref=GenBank:WP_000862878.1;Name=WP_000862878.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=SO06_RS01685;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_000862878.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 331718 331966 . - . ID=gene-SO06_RS01690;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=SO06_RS01690 NZ_MYDG01000001.1 Protein Homology CDS 331718 331966 . - 0 ID=cds-WP_023232141.1;Parent=gene-SO06_RS01690;Dbxref=GenBank:WP_023232141.1;Name=WP_023232141.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562742.1;locus_tag=SO06_RS01690;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WP_023232141.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 331978 332268 . - . ID=gene-SO06_RS01695;Name=SO06_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01695 NZ_MYDG01000001.1 Protein Homology CDS 331978 332268 . - 0 ID=cds-WP_000444713.1;Parent=gene-SO06_RS01695;Dbxref=GenBank:WP_000444713.1;Name=WP_000444713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=SO06_RS01695;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_000444713.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 332246 332461 . - . ID=gene-SO06_RS01700;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=SO06_RS01700 NZ_MYDG01000001.1 Protein Homology CDS 332246 332461 . - 0 ID=cds-WP_000350226.1;Parent=gene-SO06_RS01700;Dbxref=GenBank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=SO06_RS01700;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 332555 333244 . - . ID=gene-SO06_RS01705;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=SO06_RS01705 NZ_MYDG01000001.1 Protein Homology CDS 332555 333244 . - 0 ID=cds-WP_000805835.1;Parent=gene-SO06_RS01705;Dbxref=GenBank:WP_000805835.1;Name=WP_000805835.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=SO06_RS01705;product=pathogenicity island 2 effector protein SseG;protein_id=WP_000805835.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 333241 334023 . - . ID=gene-SO06_RS01710;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=SO06_RS01710 NZ_MYDG01000001.1 Protein Homology CDS 333241 334023 . - 0 ID=cds-WP_023232140.1;Parent=gene-SO06_RS01710;Dbxref=GenBank:WP_023232140.1;Name=WP_023232140.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=SO06_RS01710;product=type III secretion systems effector SseF;protein_id=WP_023232140.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 334039 334473 . - . ID=gene-SO06_RS01715;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=SO06_RS01715 NZ_MYDG01000001.1 Protein Homology CDS 334039 334473 . - 0 ID=cds-WP_000979962.1;Parent=gene-SO06_RS01715;Dbxref=GenBank:WP_000979962.1;Name=WP_000979962.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=SO06_RS01715;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WP_000979962.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 334525 334941 . - . ID=gene-SO06_RS01720;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=SO06_RS01720 NZ_MYDG01000001.1 Protein Homology CDS 334525 334941 . - 0 ID=cds-WP_000249606.1;Parent=gene-SO06_RS01720;Dbxref=GenBank:WP_000249606.1;Name=WP_000249606.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=SO06_RS01720;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_000249606.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 334944 335531 . - . ID=gene-SO06_RS01725;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=SO06_RS01725 NZ_MYDG01000001.1 Protein Homology CDS 334944 335531 . - 0 ID=cds-WP_023232139.1;Parent=gene-SO06_RS01725;Dbxref=GenBank:WP_023232139.1;Name=WP_023232139.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=SO06_RS01725;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_023232139.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 335547 337001 . - . ID=gene-SO06_RS01730;Name=SO06_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01730 NZ_MYDG01000001.1 Protein Homology CDS 335547 337001 . - 0 ID=cds-WP_048348853.1;Parent=gene-SO06_RS01730;Dbxref=GenBank:WP_048348853.1;Name=WP_048348853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=SO06_RS01730;product=type III secretion system translocon protein;protein_id=WP_048348853.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 337004 337477 . - . ID=gene-SO06_RS01735;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=SO06_RS01735 NZ_MYDG01000001.1 Protein Homology CDS 337004 337477 . - 0 ID=cds-WP_000711023.1;Parent=gene-SO06_RS01735;Dbxref=GenBank:WP_000711023.1;Name=WP_000711023.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=SO06_RS01735;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_000711023.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 337474 338064 . - . ID=gene-SO06_RS01740;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=SO06_RS01740 NZ_MYDG01000001.1 Protein Homology CDS 337474 338064 . - 0 ID=cds-WP_023232138.1;Parent=gene-SO06_RS01740;Dbxref=GenBank:WP_023232138.1;Name=WP_023232138.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=SO06_RS01740;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_023232138.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 338071 338397 . - . ID=gene-SO06_RS01745;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=SO06_RS01745 NZ_MYDG01000001.1 Protein Homology CDS 338071 338397 . - 0 ID=cds-WP_023232137.1;Parent=gene-SO06_RS01745;Dbxref=GenBank:WP_023232137.1;Name=WP_023232137.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=SO06_RS01745;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_023232137.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 338660 338902 . - . ID=gene-SO06_RS01750;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=SO06_RS01750 NZ_MYDG01000001.1 Protein Homology CDS 338660 338902 . - 0 ID=cds-WP_023232136.1;Parent=gene-SO06_RS01750;Dbxref=GenBank:WP_023232136.1;Name=WP_023232136.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=SO06_RS01750;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_023232136.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 338910 340121 . - . ID=gene-SO06_RS01755;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=SO06_RS01755 NZ_MYDG01000001.1 Protein Homology CDS 338910 340121 . - 0 ID=cds-WP_023232135.1;Parent=gene-SO06_RS01755;Dbxref=GenBank:WP_023232135.1;Name=WP_023232135.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=SO06_RS01755;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_023232135.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 340102 341595 . - . ID=gene-SO06_RS01760;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=SO06_RS01760 NZ_MYDG01000001.1 Protein Homology CDS 340102 341595 . - 0 ID=cds-WP_023232134.1;Parent=gene-SO06_RS01760;Dbxref=GenBank:WP_023232134.1;Name=WP_023232134.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=SO06_RS01760;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_023232134.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 341597 341998 . - . ID=gene-SO06_RS01765;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=SO06_RS01765 NZ_MYDG01000001.1 Protein Homology CDS 341597 341998 . - 0 ID=cds-WP_001562740.1;Parent=gene-SO06_RS01765;Dbxref=GenBank:WP_001562740.1;Name=WP_001562740.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=SO06_RS01765;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_001562740.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 342399 345161 . + . ID=gene-SO06_RS01770;Name=SO06_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01770 NZ_MYDG01000001.1 Protein Homology CDS 342399 345161 . + 0 ID=cds-WP_048348854.1;Parent=gene-SO06_RS01770;Dbxref=GenBank:WP_048348854.1;Name=WP_048348854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=SO06_RS01770;product=two component system sensor kinase;protein_id=WP_048348854.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 345192 345830 . + . ID=gene-SO06_RS01775;Name=SO06_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01775 NZ_MYDG01000001.1 Protein Homology CDS 345192 345830 . + 0 ID=cds-WP_000666334.1;Parent=gene-SO06_RS01775;Dbxref=GenBank:WP_000666334.1;Name=WP_000666334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=SO06_RS01775;product=two component system response regulator;protein_id=WP_000666334.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 346009 346737 . + . ID=gene-SO06_RS01780;Name=SO06_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01780 NZ_MYDG01000001.1 Protein Homology CDS 346009 346737 . + 0 ID=cds-WP_000122318.1;Parent=gene-SO06_RS01780;Dbxref=GenBank:WP_000122318.1;Name=WP_000122318.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=SO06_RS01780;product=MerR family transcriptional regulator;protein_id=WP_000122318.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 346909 347868 . + . ID=gene-SO06_RS01785;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=SO06_RS01785 NZ_MYDG01000001.1 Protein Homology CDS 346909 347868 . + 0 ID=cds-WP_001060723.1;Parent=gene-SO06_RS01785;Dbxref=GenBank:WP_001060723.1;Name=WP_001060723.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=SO06_RS01785;product=transcriptional regulator MlrB;protein_id=WP_001060723.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 347964 348176 . - . ID=gene-SO06_RS01790;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=SO06_RS01790 NZ_MYDG01000001.1 Protein Homology CDS 347964 348176 . - 0 ID=cds-WP_000165779.1;Parent=gene-SO06_RS01790;Dbxref=GenBank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=SO06_RS01790;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 348274 348894 . - . ID=gene-SO06_RS01795;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=SO06_RS01795 NZ_MYDG01000001.1 Protein Homology CDS 348274 348894 . - 0 ID=cds-WP_000190927.1;Parent=gene-SO06_RS01795;Dbxref=GenBank:WP_000190927.1;Name=WP_000190927.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=SO06_RS01795;product=tetrathionate respiration response regulator TtrR;protein_id=WP_000190927.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 348869 350647 . - . ID=gene-SO06_RS01800;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=SO06_RS01800 NZ_MYDG01000001.1 Protein Homology CDS 348869 350647 . - 0 ID=cds-WP_077248401.1;Parent=gene-SO06_RS01800;Dbxref=GenBank:WP_077248401.1;Name=WP_077248401.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=SO06_RS01800;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_077248401.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 350829 351563 . + . ID=gene-SO06_RS01805;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=SO06_RS01805 NZ_MYDG01000001.1 Protein Homology CDS 350829 351563 . + 0 ID=cds-WP_023206656.1;Parent=gene-SO06_RS01805;Dbxref=GenBank:WP_023206656.1;Name=WP_023206656.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=SO06_RS01805;product=tetrathionate reductase subunit TtrB;protein_id=WP_023206656.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 351564 352586 . + . ID=gene-SO06_RS01810;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=SO06_RS01810 NZ_MYDG01000001.1 Protein Homology CDS 351564 352586 . + 0 ID=cds-WP_000149774.1;Parent=gene-SO06_RS01810;Dbxref=GenBank:WP_000149774.1;Name=WP_000149774.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=SO06_RS01810;product=tetrathionate reductase subunit TtrC;protein_id=WP_000149774.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 352579 355641 . + . ID=gene-SO06_RS01815;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=SO06_RS01815 NZ_MYDG01000001.1 Protein Homology CDS 352579 355641 . + 0 ID=cds-WP_048348855.1;Parent=gene-SO06_RS01815;Dbxref=GenBank:WP_048348855.1;Name=WP_048348855.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=SO06_RS01815;product=tetrathionate reductase subunit TtrA;protein_id=WP_048348855.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 355964 357190 . + . ID=gene-SO06_RS01820;Name=SO06_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01820 NZ_MYDG01000001.1 Protein Homology CDS 355964 357190 . + 0 ID=cds-WP_000471822.1;Parent=gene-SO06_RS01820;Dbxref=GenBank:WP_000471822.1;Name=WP_000471822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=SO06_RS01820;product=PfkB family carbohydrate kinase;protein_id=WP_000471822.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 357202 357939 . + . ID=gene-SO06_RS01825;Name=SO06_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01825 NZ_MYDG01000001.1 Protein Homology CDS 357202 357939 . + 0 ID=cds-WP_023232085.1;Parent=gene-SO06_RS01825;Dbxref=GenBank:WP_023232085.1;Name=WP_023232085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=SO06_RS01825;product=glutamine amidotransferase;protein_id=WP_023232085.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 357998 358891 . + . ID=gene-SO06_RS01830;Name=SO06_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01830 NZ_MYDG01000001.1 Protein Homology CDS 357998 358891 . + 0 ID=cds-WP_001000508.1;Parent=gene-SO06_RS01830;Dbxref=GenBank:WP_001000508.1;Name=WP_001000508.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=SO06_RS01830;product=proline iminopeptidase-family hydrolase;protein_id=WP_001000508.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 358913 360256 . + . ID=gene-SO06_RS01835;Name=SO06_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01835 NZ_MYDG01000001.1 Protein Homology CDS 358913 360256 . + 0 ID=cds-WP_000756089.1;Parent=gene-SO06_RS01835;Dbxref=GenBank:WP_000756089.1;Name=WP_000756089.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=SO06_RS01835;product=APC family permease;protein_id=WP_000756089.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 360420 360650 . + . ID=gene-SO06_RS25745;Name=ynhH;gbkey=Gene;gene=ynhH;gene_biotype=protein_coding;locus_tag=SO06_RS25745 NZ_MYDG01000001.1 Protein Homology CDS 360420 360650 . + 0 ID=cds-WP_418143684.1;Parent=gene-SO06_RS25745;Dbxref=GenBank:WP_418143684.1;Name=WP_418143684.1;gbkey=CDS;gene=ynhH;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=SO06_RS25745;product=protein YnhH;protein_id=WP_418143684.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 360658 362070 . + . ID=gene-SO06_RS01845;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=SO06_RS01845 NZ_MYDG01000001.1 Protein Homology CDS 360658 362070 . + 0 ID=cds-WP_000751447.1;Parent=gene-SO06_RS01845;Dbxref=GenBank:WP_000751447.1;Name=WP_000751447.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=SO06_RS01845;product=pyruvate kinase PykF;protein_id=WP_000751447.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 362381 362617 . + . ID=gene-SO06_RS01850;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=SO06_RS01850 NZ_MYDG01000001.1 Protein Homology CDS 362381 362617 . + 0 ID=cds-WP_001082307.1;Parent=gene-SO06_RS01850;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=SO06_RS01850;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 362700 362939 . + . ID=gene-SO06_RS01855;Name=SO06_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01855 NZ_MYDG01000001.1 Protein Homology CDS 362700 362939 . + 0 ID=cds-WP_039590634.1;Parent=gene-SO06_RS01855;Dbxref=GenBank:WP_039590634.1;Name=WP_039590634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=SO06_RS01855;product=major outer membrane lipoprotein;protein_id=WP_039590634.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 363008 364009 . - . ID=gene-SO06_RS01860;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=SO06_RS01860 NZ_MYDG01000001.1 Protein Homology CDS 363008 364009 . - 0 ID=cds-WP_000817060.1;Parent=gene-SO06_RS01860;Dbxref=GenBank:WP_000817060.1;Name=WP_000817060.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=SO06_RS01860;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817060.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 364164 364580 . - . ID=gene-SO06_RS01865;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=SO06_RS01865 NZ_MYDG01000001.1 Protein Homology CDS 364164 364580 . - 0 ID=cds-WP_000729470.1;Parent=gene-SO06_RS01865;Dbxref=GenBank:WP_000729470.1;Name=WP_000729470.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=SO06_RS01865;product=cysteine desulfuration protein SufE;protein_id=WP_000729470.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 364593 365813 . - . ID=gene-SO06_RS01870;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=SO06_RS01870 NZ_MYDG01000001.1 Protein Homology CDS 364593 365813 . - 0 ID=cds-WP_000143859.1;Parent=gene-SO06_RS01870;Dbxref=GenBank:WP_000143859.1;Name=WP_000143859.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=SO06_RS01870;product=cysteine desulfurase SufS;protein_id=WP_000143859.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 365810 367081 . - . ID=gene-SO06_RS01875;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=SO06_RS01875 NZ_MYDG01000001.1 Protein Homology CDS 365810 367081 . - 0 ID=cds-WP_023232086.1;Parent=gene-SO06_RS01875;Dbxref=GenBank:WP_023232086.1;Name=WP_023232086.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=SO06_RS01875;product=Fe-S cluster assembly protein SufD;protein_id=WP_023232086.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 367056 367802 . - . ID=gene-SO06_RS01880;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=SO06_RS01880 NZ_MYDG01000001.1 Protein Homology CDS 367056 367802 . - 0 ID=cds-WP_000948902.1;Parent=gene-SO06_RS01880;Dbxref=GenBank:WP_000948902.1;Name=WP_000948902.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=SO06_RS01880;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948902.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 367819 369306 . - . ID=gene-SO06_RS01885;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=SO06_RS01885 NZ_MYDG01000001.1 Protein Homology CDS 367819 369306 . - 0 ID=cds-WP_000089383.1;Parent=gene-SO06_RS01885;Dbxref=GenBank:WP_000089383.1;Name=WP_000089383.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=SO06_RS01885;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089383.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 369315 369683 . - . ID=gene-SO06_RS01890;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=SO06_RS01890 NZ_MYDG01000001.1 Protein Homology CDS 369315 369683 . - 0 ID=cds-WP_000418970.1;Parent=gene-SO06_RS01890;Dbxref=GenBank:WP_000418970.1;Name=WP_000418970.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=SO06_RS01890;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418970.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 370110 371456 . + . ID=gene-SO06_RS01895;Name=SO06_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01895 NZ_MYDG01000001.1 Protein Homology CDS 370110 371456 . + 0 ID=cds-WP_048348856.1;Parent=gene-SO06_RS01895;Dbxref=GenBank:WP_048348856.1;Name=WP_048348856.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=SO06_RS01895;product=L-cystine transporter;protein_id=WP_048348856.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 371744 371932 . - . ID=gene-SO06_RS01900;Name=SO06_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01900 NZ_MYDG01000001.1 Protein Homology CDS 371744 371932 . - 0 ID=cds-WP_001537749.1;Parent=gene-SO06_RS01900;Dbxref=GenBank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=SO06_RS01900;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 372031 372441 . - . ID=gene-SO06_RS01905;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=SO06_RS01905 NZ_MYDG01000001.1 Protein Homology CDS 372031 372441 . - 0 ID=cds-WP_000637930.1;Parent=gene-SO06_RS01905;Dbxref=GenBank:WP_000637930.1;Name=WP_000637930.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=SO06_RS01905;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637930.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 372438 375494 . - . ID=gene-SO06_RS01910;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=SO06_RS01910 NZ_MYDG01000001.1 Protein Homology CDS 372438 375494 . - 0 ID=cds-WP_015405972.1;Parent=gene-SO06_RS01910;Dbxref=GenBank:WP_015405972.1;Name=WP_015405972.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=SO06_RS01910;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_015405972.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 375759 376877 . + . ID=gene-SO06_RS01915;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=SO06_RS01915 NZ_MYDG01000001.1 Protein Homology CDS 375759 376877 . + 0 ID=cds-WP_000248615.1;Parent=gene-SO06_RS01915;Dbxref=GenBank:WP_000248615.1;Name=WP_000248615.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=SO06_RS01915;product=AI-2E family transporter YdiK;protein_id=WP_000248615.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 377060 377167 . + . ID=gene-SO06_RS01920;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=SO06_RS01920 NZ_MYDG01000001.1 cmsearch antisense_RNA 377060 377167 . + . ID=rna-SO06_RS01920;Parent=gene-SO06_RS01920;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS01920;product=antisense sRNA RprA NZ_MYDG01000001.1 cmsearch exon 377060 377167 . + . ID=exon-SO06_RS01920-1;Parent=rna-SO06_RS01920;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS01920;product=antisense sRNA RprA NZ_MYDG01000001.1 RefSeq gene 377335 377694 . + . ID=gene-SO06_RS01925;Name=SO06_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01925 NZ_MYDG01000001.1 Protein Homology CDS 377335 377694 . + 0 ID=cds-WP_000980455.1;Parent=gene-SO06_RS01925;Dbxref=GenBank:WP_000980455.1;Name=WP_000980455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=SO06_RS01925;product=YdiL family protein;protein_id=WP_000980455.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 377835 379046 . + . ID=gene-SO06_RS01930;Name=SO06_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01930 NZ_MYDG01000001.1 Protein Homology CDS 377835 379046 . + 0 ID=cds-WP_000797666.1;Parent=gene-SO06_RS01930;Dbxref=GenBank:WP_000797666.1;Name=WP_000797666.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=SO06_RS01930;product=MFS transporter;protein_id=WP_000797666.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 379410 380645 . + . ID=gene-SO06_RS01935;Name=SO06_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01935 NZ_MYDG01000001.1 Protein Homology CDS 379410 380645 . + 0 ID=cds-WP_023232201.1;Parent=gene-SO06_RS01935;Dbxref=GenBank:WP_023232201.1;Name=WP_023232201.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=SO06_RS01935;product=MFS transporter;protein_id=WP_023232201.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 380712 381578 . + . ID=gene-SO06_RS01940;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=SO06_RS01940 NZ_MYDG01000001.1 Protein Homology CDS 380712 381578 . + 0 ID=cds-WP_000383488.1;Parent=gene-SO06_RS01940;Dbxref=GenBank:WP_000383488.1;Name=WP_000383488.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=SO06_RS01940;product=quinate/shikimate dehydrogenase;protein_id=WP_000383488.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 381623 382381 . + . ID=gene-SO06_RS01945;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=SO06_RS01945 NZ_MYDG01000001.1 Protein Homology CDS 381623 382381 . + 0 ID=cds-WP_048348857.1;Parent=gene-SO06_RS01945;Dbxref=GenBank:WP_048348857.1;Name=WP_048348857.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=SO06_RS01945;product=type I 3-dehydroquinate dehydratase;protein_id=WP_048348857.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 382535 384130 . + . ID=gene-SO06_RS01950;Name=SO06_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01950 NZ_MYDG01000001.1 Protein Homology CDS 382535 384130 . + 0 ID=cds-WP_000700599.1;Parent=gene-SO06_RS01950;Dbxref=GenBank:WP_000700599.1;Name=WP_000700599.1;Ontology_term=GO:0008410,GO:0016782;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=SO06_RS01950;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000700599.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 384144 385295 . + . ID=gene-SO06_RS01955;Name=SO06_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01955 NZ_MYDG01000001.1 Protein Homology CDS 384144 385295 . + 0 ID=cds-WP_000347819.1;Parent=gene-SO06_RS01955;Dbxref=GenBank:WP_000347819.1;Name=WP_000347819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=SO06_RS01955;product=acyl-CoA dehydrogenase;protein_id=WP_000347819.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 385371 386261 . - . ID=gene-SO06_RS01960;Name=SO06_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01960 NZ_MYDG01000001.1 Protein Homology CDS 385371 386261 . - 0 ID=cds-WP_000284832.1;Parent=gene-SO06_RS01960;Dbxref=GenBank:WP_000284832.1;Name=WP_000284832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=SO06_RS01960;product=AraC family transcriptional regulator;protein_id=WP_000284832.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 386724 387488 . + . ID=gene-SO06_RS01965;Name=SO06_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01965 NZ_MYDG01000001.1 Protein Homology CDS 386724 387488 . + 0 ID=cds-WP_023232438.1;Parent=gene-SO06_RS01965;Dbxref=GenBank:WP_023232438.1;Name=WP_023232438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=SO06_RS01965;product=electron transfer flavoprotein;protein_id=WP_023232438.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 387510 388445 . + . ID=gene-SO06_RS01970;Name=SO06_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01970 NZ_MYDG01000001.1 Protein Homology CDS 387510 388445 . + 0 ID=cds-WP_001015880.1;Parent=gene-SO06_RS01970;Dbxref=GenBank:WP_001015880.1;Name=WP_001015880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=SO06_RS01970;product=electron transfer flavoprotein subunit alpha;protein_id=WP_001015880.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 388502 389788 . + . ID=gene-SO06_RS01975;Name=SO06_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01975 NZ_MYDG01000001.1 Protein Homology CDS 388502 389788 . + 0 ID=cds-WP_048348858.1;Parent=gene-SO06_RS01975;Dbxref=GenBank:WP_048348858.1;Name=WP_048348858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=SO06_RS01975;product=FAD-dependent oxidoreductase;protein_id=WP_048348858.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 389785 390078 . + . ID=gene-SO06_RS01980;Name=SO06_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS01980 NZ_MYDG01000001.1 Protein Homology CDS 389785 390078 . + 0 ID=cds-WP_000093359.1;Parent=gene-SO06_RS01980;Dbxref=GenBank:WP_000093359.1;Name=WP_000093359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=SO06_RS01980;product=ferredoxin family protein;protein_id=WP_000093359.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 390168 391808 . + . ID=gene-SO06_RS01985;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=SO06_RS01985 NZ_MYDG01000001.1 Protein Homology CDS 390168 391808 . + 0 ID=cds-WP_000117492.1;Parent=gene-SO06_RS01985;Dbxref=GenBank:WP_000117492.1;Name=WP_000117492.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=SO06_RS01985;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_000117492.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 391850 394228 . - . ID=gene-SO06_RS01990;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=SO06_RS01990 NZ_MYDG01000001.1 Protein Homology CDS 391850 394228 . - 0 ID=cds-WP_000069333.1;Parent=gene-SO06_RS01990;Dbxref=GenBank:WP_000069333.1;Name=WP_000069333.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=SO06_RS01990;product=phosphoenolpyruvate synthase;protein_id=WP_000069333.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 394565 395398 . + . ID=gene-SO06_RS01995;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=SO06_RS01995 NZ_MYDG01000001.1 Protein Homology CDS 394565 395398 . + 0 ID=cds-WP_000370992.1;Parent=gene-SO06_RS01995;Dbxref=GenBank:WP_000370992.1;Name=WP_000370992.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=SO06_RS01995;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000370992.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 395554 396600 . + . ID=gene-SO06_RS02000;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=SO06_RS02000 NZ_MYDG01000001.1 Protein Homology CDS 395554 396600 . + 0 ID=cds-WP_001082196.1;Parent=gene-SO06_RS02000;Dbxref=GenBank:WP_001082196.1;Name=WP_001082196.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=SO06_RS02000;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082196.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 396757 396948 . + . ID=gene-SO06_RS02005;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=SO06_RS02005 NZ_MYDG01000001.1 Protein Homology CDS 396757 396948 . + 0 ID=cds-WP_000089118.1;Parent=gene-SO06_RS02005;Dbxref=GenBank:WP_000089118.1;Name=WP_000089118.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=SO06_RS02005;product=hemin uptake protein HemP;protein_id=WP_000089118.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 396984 398426 . - . ID=gene-SO06_RS02010;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=SO06_RS02010 NZ_MYDG01000001.1 Protein Homology CDS 396984 398426 . - 0 ID=cds-WP_023231435.1;Parent=gene-SO06_RS02010;Dbxref=GenBank:WP_023231435.1;Name=WP_023231435.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=SO06_RS02010;product=protein adenylyltransferase SelO;protein_id=WP_023231435.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 398488 399201 . - . ID=gene-SO06_RS02015;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=SO06_RS02015 NZ_MYDG01000001.1 Protein Homology CDS 398488 399201 . - 0 ID=cds-WP_023231434.1;Parent=gene-SO06_RS02015;Dbxref=GenBank:WP_023231434.1;Name=WP_023231434.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=SO06_RS02015;product=anti-FlhDC factor YdiV;protein_id=WP_023231434.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 399515 399979 . - . ID=gene-SO06_RS02020;Name=SO06_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02020 NZ_MYDG01000001.1 Protein Homology CDS 399515 399979 . - 0 ID=cds-WP_001213256.1;Parent=gene-SO06_RS02020;Dbxref=GenBank:WP_001213256.1;Name=WP_001213256.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=SO06_RS02020;product=C40 family peptidase;protein_id=WP_001213256.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 400056 400805 . - . ID=gene-SO06_RS02025;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=SO06_RS02025 NZ_MYDG01000001.1 Protein Homology CDS 400056 400805 . - 0 ID=cds-WP_000080607.1;Parent=gene-SO06_RS02025;Dbxref=GenBank:WP_000080607.1;Name=WP_000080607.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=SO06_RS02025;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000080607.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 400805 401356 . - . ID=gene-SO06_RS02030;Name=SO06_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02030 NZ_MYDG01000001.1 Protein Homology CDS 400805 401356 . - 0 ID=cds-WP_001181565.1;Parent=gene-SO06_RS02030;Dbxref=GenBank:WP_001181565.1;Name=WP_001181565.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=SO06_RS02030;product=glutathione peroxidase;protein_id=WP_001181565.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 401448 402428 . - . ID=gene-SO06_RS02035;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=SO06_RS02035 NZ_MYDG01000001.1 Protein Homology CDS 401448 402428 . - 0 ID=cds-WP_000954984.1;Parent=gene-SO06_RS02035;Dbxref=GenBank:WP_000954984.1;Name=WP_000954984.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=SO06_RS02035;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000954984.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 402631 402930 . - . ID=gene-SO06_RS02040;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=SO06_RS02040 NZ_MYDG01000001.1 Protein Homology CDS 402631 402930 . - 0 ID=cds-WP_001229266.1;Parent=gene-SO06_RS02040;Dbxref=GenBank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=SO06_RS02040;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 402935 405322 . - . ID=gene-SO06_RS02045;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=SO06_RS02045 NZ_MYDG01000001.1 Protein Homology CDS 402935 405322 . - 0 ID=cds-WP_000672402.1;Parent=gene-SO06_RS02045;Dbxref=GenBank:WP_000672402.1;Name=WP_000672402.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=SO06_RS02045;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672402.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 405338 406321 . - . ID=gene-SO06_RS02050;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=SO06_RS02050 NZ_MYDG01000001.1 Protein Homology CDS 405338 406321 . - 0 ID=cds-WP_000018570.1;Parent=gene-SO06_RS02050;Dbxref=GenBank:WP_000018570.1;Name=WP_000018570.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=SO06_RS02050;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018570.1;transl_table=11 NZ_MYDG01000001.1 cmsearch sequence_feature 406384 406507 . - . ID=id-NZ_MYDG01000001.1:406384..406507;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_MYDG01000001.1 RefSeq gene 406458 406502 . - . ID=gene-SO06_RS24900;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=SO06_RS24900 NZ_MYDG01000001.1 Protein Homology CDS 406458 406502 . - 0 ID=cds-WP_001386830.1;Parent=gene-SO06_RS24900;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=SO06_RS24900;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 406623 406979 . - . ID=gene-SO06_RS02060;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=SO06_RS02060 NZ_MYDG01000001.1 Protein Homology CDS 406623 406979 . - 0 ID=cds-WP_000124850.1;Parent=gene-SO06_RS02060;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=SO06_RS02060;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 407030 407227 . - . ID=gene-SO06_RS02065;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=SO06_RS02065 NZ_MYDG01000001.1 Protein Homology CDS 407030 407227 . - 0 ID=cds-WP_001124225.1;Parent=gene-SO06_RS02065;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=SO06_RS02065;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 407323 407865 . - . ID=gene-SO06_RS02070;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=SO06_RS02070 NZ_MYDG01000001.1 Protein Homology CDS 407323 407865 . - 0 ID=cds-WP_001574431.1;Parent=gene-SO06_RS02070;Dbxref=GenBank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=SO06_RS02070;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 407869 409797 . - . ID=gene-SO06_RS02075;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=SO06_RS02075 NZ_MYDG01000001.1 Protein Homology CDS 407869 409797 . - 0 ID=cds-WP_001144226.1;Parent=gene-SO06_RS02075;Dbxref=GenBank:WP_001144226.1;Name=WP_001144226.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=SO06_RS02075;product=threonine--tRNA ligase;protein_id=WP_001144226.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 410695 411918 . + . ID=gene-SO06_RS02085;Name=rfc;gbkey=Gene;gene=rfc;gene_biotype=protein_coding;locus_tag=SO06_RS02085 NZ_MYDG01000001.1 Protein Homology CDS 410695 411918 . + 0 ID=cds-WP_023182074.1;Parent=gene-SO06_RS02085;Dbxref=GenBank:WP_023182074.1;Name=WP_023182074.1;gbkey=CDS;gene=rfc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460298.1;locus_tag=SO06_RS02085;product=O-antigen polymerase Rfc;protein_id=WP_023182074.1;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 412226 412431 . - . ID=gene-SO06_RS02090;Name=SO06_RS02090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS02090;pseudo=true NZ_MYDG01000001.1 Protein Homology CDS 412226 412431 . - 0 ID=cds-SO06_RS02090;Parent=gene-SO06_RS02090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447756.1;locus_tag=SO06_RS02090;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 412604 413458 . - . ID=gene-SO06_RS02095;Name=SO06_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02095 NZ_MYDG01000001.1 Protein Homology CDS 412604 413458 . - 0 ID=cds-WP_001044092.1;Parent=gene-SO06_RS02095;Dbxref=GenBank:WP_001044092.1;Name=WP_001044092.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=SO06_RS02095;product=DNA/RNA non-specific endonuclease;protein_id=WP_001044092.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 413455 413769 . - . ID=gene-SO06_RS02100;Name=SO06_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02100 NZ_MYDG01000001.1 Protein Homology CDS 413455 413769 . - 0 ID=cds-WP_023231433.1;Parent=gene-SO06_RS02100;Dbxref=GenBank:WP_023231433.1;Name=WP_023231433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=SO06_RS02100;product=hypothetical protein;protein_id=WP_023231433.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 413912 414871 . + . ID=gene-SO06_RS02105;Name=SO06_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02105 NZ_MYDG01000001.1 Protein Homology CDS 413912 414871 . + 0 ID=cds-WP_023231432.1;Parent=gene-SO06_RS02105;Dbxref=GenBank:WP_023231432.1;Name=WP_023231432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=SO06_RS02105;product=lipid A deacylase LpxR family protein;protein_id=WP_023231432.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 414920 415678 . - . ID=gene-SO06_RS02110;Name=SO06_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02110 NZ_MYDG01000001.1 Protein Homology CDS 414920 415678 . - 0 ID=cds-WP_000770979.1;Parent=gene-SO06_RS02110;Dbxref=GenBank:WP_000770979.1;Name=WP_000770979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=SO06_RS02110;product=DUF481 domain-containing protein;protein_id=WP_000770979.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 415967 416899 . + . ID=gene-SO06_RS02115;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=SO06_RS02115 NZ_MYDG01000001.1 Protein Homology CDS 415967 416899 . + 0 ID=cds-WP_000251697.1;Parent=gene-SO06_RS02115;Dbxref=GenBank:WP_000251697.1;Name=WP_000251697.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=SO06_RS02115;product=6-phosphofructokinase II;protein_id=WP_000251697.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 416996 417286 . + . ID=gene-SO06_RS02120;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=SO06_RS02120 NZ_MYDG01000001.1 Protein Homology CDS 416996 417286 . + 0 ID=cds-WP_000146133.1;Parent=gene-SO06_RS02120;Dbxref=GenBank:WP_000146133.1;Name=WP_000146133.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=SO06_RS02120;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146133.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 417393 418253 . + . ID=gene-SO06_RS02125;Name=SO06_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02125 NZ_MYDG01000001.1 Protein Homology CDS 417393 418253 . + 0 ID=cds-WP_000267686.1;Parent=gene-SO06_RS02125;Dbxref=GenBank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=SO06_RS02125;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 418296 418832 . - . ID=gene-SO06_RS02130;Name=SO06_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02130 NZ_MYDG01000001.1 Protein Homology CDS 418296 418832 . - 0 ID=cds-WP_023231501.1;Parent=gene-SO06_RS02130;Dbxref=GenBank:WP_023231501.1;Name=WP_023231501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=SO06_RS02130;product=YniB family protein;protein_id=WP_023231501.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 418981 419649 . + . ID=gene-SO06_RS02135;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=SO06_RS02135 NZ_MYDG01000001.1 Protein Homology CDS 418981 419649 . + 0 ID=cds-WP_000106854.1;Parent=gene-SO06_RS02135;Dbxref=GenBank:WP_000106854.1;Name=WP_000106854.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=SO06_RS02135;product=hexitol phosphatase HxpB;protein_id=WP_000106854.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 419787 420386 . + . ID=gene-SO06_RS02140;Name=SO06_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02140 NZ_MYDG01000001.1 Protein Homology CDS 419787 420386 . + 0 ID=cds-WP_000505804.1;Parent=gene-SO06_RS02140;Dbxref=GenBank:WP_000505804.1;Name=WP_000505804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=SO06_RS02140;product=metal-dependent hydrolase;protein_id=WP_000505804.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 420523 421914 . + . ID=gene-SO06_RS02145;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=SO06_RS02145 NZ_MYDG01000001.1 Protein Homology CDS 420523 421914 . + 0 ID=cds-WP_001010662.1;Parent=gene-SO06_RS02145;Dbxref=GenBank:WP_001010662.1;Name=WP_001010662.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=SO06_RS02145;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010662.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 422017 422259 . - . ID=gene-SO06_RS02150;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=SO06_RS02150 NZ_MYDG01000001.1 Protein Homology CDS 422017 422259 . - 0 ID=cds-WP_000977510.1;Parent=gene-SO06_RS02150;Dbxref=GenBank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=SO06_RS02150;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 422624 424876 . + . ID=gene-SO06_RS02160;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=SO06_RS02160 NZ_MYDG01000001.1 Protein Homology CDS 422624 424876 . + 0 ID=cds-WP_023231503.1;Parent=gene-SO06_RS02160;Dbxref=GenBank:WP_023231503.1;Name=WP_023231503.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=SO06_RS02160;product=catalase HPII;protein_id=WP_023231503.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 424920 425678 . - . ID=gene-SO06_RS02165;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=SO06_RS02165 NZ_MYDG01000001.1 Protein Homology CDS 424920 425678 . - 0 ID=cds-WP_000442730.1;Parent=gene-SO06_RS02165;Dbxref=GenBank:WP_000442730.1;Name=WP_000442730.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=SO06_RS02165;product=chitin disaccharide deacetylase;protein_id=WP_000442730.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 425691 427046 . - . ID=gene-SO06_RS02170;Name=SO06_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02170 NZ_MYDG01000001.1 Protein Homology CDS 425691 427046 . - 0 ID=cds-WP_023231504.1;Parent=gene-SO06_RS02170;Dbxref=GenBank:WP_023231504.1;Name=WP_023231504.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=SO06_RS02170;product=6-phospho-beta-glucosidase;protein_id=WP_023231504.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 427171 428013 . - . ID=gene-SO06_RS02175;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=SO06_RS02175 NZ_MYDG01000001.1 Protein Homology CDS 427171 428013 . - 0 ID=cds-WP_000983393.1;Parent=gene-SO06_RS02175;Dbxref=GenBank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=SO06_RS02175;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 428024 428371 . - . ID=gene-SO06_RS02180;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=SO06_RS02180 NZ_MYDG01000001.1 Protein Homology CDS 428024 428371 . - 0 ID=cds-WP_000459883.1;Parent=gene-SO06_RS02180;Dbxref=GenBank:WP_000459883.1;Name=WP_000459883.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=SO06_RS02180;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000459883.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 428422 429780 . - . ID=gene-SO06_RS02185;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=SO06_RS02185 NZ_MYDG01000001.1 Protein Homology CDS 428422 429780 . - 0 ID=cds-WP_000073067.1;Parent=gene-SO06_RS02185;Dbxref=GenBank:WP_000073067.1;Name=WP_000073067.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=SO06_RS02185;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073067.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 429863 430183 . - . ID=gene-SO06_RS02190;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=SO06_RS02190 NZ_MYDG01000001.1 Protein Homology CDS 429863 430183 . - 0 ID=cds-WP_000412161.1;Parent=gene-SO06_RS02190;Dbxref=GenBank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=SO06_RS02190;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 430484 430825 . - . ID=gene-SO06_RS02200;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=SO06_RS02200 NZ_MYDG01000001.1 Protein Homology CDS 430484 430825 . - 0 ID=cds-WP_001039301.1;Parent=gene-SO06_RS02200;Dbxref=GenBank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=SO06_RS02200;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 431044 431871 . + . ID=gene-SO06_RS02205;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=SO06_RS02205 NZ_MYDG01000001.1 Protein Homology CDS 431044 431871 . + 0 ID=cds-WP_000174982.1;Parent=gene-SO06_RS02205;Dbxref=GenBank:WP_000174982.1;Name=WP_000174982.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=SO06_RS02205;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000174982.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 431992 432873 . + . ID=gene-SO06_RS02210;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=SO06_RS02210 NZ_MYDG01000001.1 Protein Homology CDS 431992 432873 . + 0 ID=cds-WP_023231505.1;Parent=gene-SO06_RS02210;Dbxref=GenBank:WP_023231505.1;Name=WP_023231505.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=SO06_RS02210;product=excinuclease Cho;protein_id=WP_023231505.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 432948 433433 . - . ID=gene-SO06_RS02215;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=SO06_RS02215 NZ_MYDG01000001.1 Protein Homology CDS 432948 433433 . - 0 ID=cds-WP_001229001.1;Parent=gene-SO06_RS02215;Dbxref=GenBank:WP_001229001.1;Name=WP_001229001.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=SO06_RS02215;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001229001.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 433769 434737 . - . ID=gene-SO06_RS02225;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=SO06_RS02225 NZ_MYDG01000001.1 Protein Homology CDS 433769 434737 . - 0 ID=cds-WP_023231506.1;Parent=gene-SO06_RS02225;Dbxref=GenBank:WP_023231506.1;Name=WP_023231506.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=SO06_RS02225;product=succinylglutamate desuccinylase;protein_id=WP_023231506.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 434730 436073 . - . ID=gene-SO06_RS02230;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=SO06_RS02230 NZ_MYDG01000001.1 Protein Homology CDS 434730 436073 . - 0 ID=cds-WP_048348860.1;Parent=gene-SO06_RS02230;Dbxref=GenBank:WP_048348860.1;Name=WP_048348860.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=SO06_RS02230;product=N-succinylarginine dihydrolase;protein_id=WP_048348860.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 436070 437548 . - . ID=gene-SO06_RS02235;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=SO06_RS02235 NZ_MYDG01000001.1 Protein Homology CDS 436070 437548 . - 0 ID=cds-WP_080204155.1;Parent=gene-SO06_RS02235;Dbxref=GenBank:WP_080204155.1;Name=WP_080204155.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=SO06_RS02235;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_080204155.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 437545 438579 . - . ID=gene-SO06_RS02240;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=SO06_RS02240 NZ_MYDG01000001.1 Protein Homology CDS 437545 438579 . - 0 ID=cds-WP_023231775.1;Parent=gene-SO06_RS02240;Dbxref=GenBank:WP_023231775.1;Name=WP_023231775.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=SO06_RS02240;product=arginine N-succinyltransferase;protein_id=WP_023231775.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 438570 439796 . - . ID=gene-SO06_RS02245;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=SO06_RS02245 NZ_MYDG01000001.1 Protein Homology CDS 438570 439796 . - 0 ID=cds-WP_023231774.1;Parent=gene-SO06_RS02245;Dbxref=GenBank:WP_023231774.1;Name=WP_023231774.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=SO06_RS02245;product=succinylornithine/acetylornithine transaminase;protein_id=WP_023231774.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 440242 441048 . + . ID=gene-SO06_RS02255;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=SO06_RS02255 NZ_MYDG01000001.1 Protein Homology CDS 440242 441048 . + 0 ID=cds-WP_000673954.1;Parent=gene-SO06_RS02255;Dbxref=GenBank:WP_000673954.1;Name=WP_000673954.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=SO06_RS02255;product=exodeoxyribonuclease III;protein_id=WP_000673954.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 441121 441537 . + . ID=gene-SO06_RS02260;Name=SO06_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02260 NZ_MYDG01000001.1 Protein Homology CDS 441121 441537 . + 0 ID=cds-WP_001527820.1;Parent=gene-SO06_RS02260;Dbxref=GenBank:WP_001527820.1;Name=WP_001527820.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=SO06_RS02260;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_001527820.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 441497 441772 . - . ID=gene-SO06_RS02265;Name=SO06_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02265 NZ_MYDG01000001.1 Protein Homology CDS 441497 441772 . - 0 ID=cds-WP_001254682.1;Parent=gene-SO06_RS02265;Dbxref=GenBank:WP_001254682.1;Name=WP_001254682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=SO06_RS02265;product=YnjH family protein;protein_id=WP_001254682.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 442011 443354 . + . ID=gene-SO06_RS02270;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=SO06_RS02270 NZ_MYDG01000001.1 Protein Homology CDS 442011 443354 . + 0 ID=cds-WP_000372865.1;Parent=gene-SO06_RS02270;Dbxref=GenBank:WP_000372865.1;Name=WP_000372865.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=SO06_RS02270;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372865.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 443384 445333 . - . ID=gene-SO06_RS02275;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=SO06_RS02275 NZ_MYDG01000001.1 Protein Homology CDS 443384 445333 . - 0 ID=cds-WP_001235874.1;Parent=gene-SO06_RS02275;Dbxref=GenBank:WP_001235874.1;Name=WP_001235874.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=SO06_RS02275;product=DNA topoisomerase III;protein_id=WP_001235874.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 445338 446381 . - . ID=gene-SO06_RS02280;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=SO06_RS02280 NZ_MYDG01000001.1 Protein Homology CDS 445338 446381 . - 0 ID=cds-WP_001294900.1;Parent=gene-SO06_RS02280;Dbxref=GenBank:WP_001294900.1;Name=WP_001294900.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=SO06_RS02280;product=selenide%2C water dikinase SelD;protein_id=WP_001294900.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 446499 447050 . - . ID=gene-SO06_RS02290;Name=SO06_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02290 NZ_MYDG01000001.1 Protein Homology CDS 446499 447050 . - 0 ID=cds-WP_023231453.1;Parent=gene-SO06_RS02290;Dbxref=GenBank:WP_023231453.1;Name=WP_023231453.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=SO06_RS02290;product=NAD(P)H nitroreductase;protein_id=WP_023231453.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 447224 449080 . + . ID=gene-SO06_RS02295;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=SO06_RS02295 NZ_MYDG01000001.1 Protein Homology CDS 447224 449080 . + 0 ID=cds-WP_001259884.1;Parent=gene-SO06_RS02295;Dbxref=GenBank:WP_001259884.1;Name=WP_001259884.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=SO06_RS02295;product=signal peptide peptidase SppA;protein_id=WP_001259884.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 449176 450192 . + . ID=gene-SO06_RS02300;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=SO06_RS02300 NZ_MYDG01000001.1 Protein Homology CDS 449176 450192 . + 0 ID=cds-WP_001170134.1;Parent=gene-SO06_RS02300;Dbxref=GenBank:WP_001170134.1;Name=WP_001170134.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=SO06_RS02300;product=asparaginase;protein_id=WP_001170134.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 450219 450875 . + . ID=gene-SO06_RS02305;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=SO06_RS02305 NZ_MYDG01000001.1 Protein Homology CDS 450219 450875 . + 0 ID=cds-WP_000184708.1;Parent=gene-SO06_RS02305;Dbxref=GenBank:WP_000184708.1;Name=WP_000184708.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=SO06_RS02305;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184708.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 451227 451505 . - . ID=gene-SO06_RS02310;Name=SO06_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02310 NZ_MYDG01000001.1 Protein Homology CDS 451227 451505 . - 0 ID=cds-WP_023232111.1;Parent=gene-SO06_RS02310;Dbxref=GenBank:WP_023232111.1;Name=WP_023232111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=SO06_RS02310;product=YeaC family protein;protein_id=WP_023232111.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 451547 451960 . - . ID=gene-SO06_RS02315;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=SO06_RS02315 NZ_MYDG01000001.1 Protein Homology CDS 451547 451960 . - 0 ID=cds-WP_001519539.1;Parent=gene-SO06_RS02315;Dbxref=GenBank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=SO06_RS02315;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 452302 453297 . + . ID=gene-SO06_RS02320;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=SO06_RS02320 NZ_MYDG01000001.1 Protein Homology CDS 452302 453297 . + 0 ID=cds-WP_000153505.1;Parent=gene-SO06_RS02320;Dbxref=GenBank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=SO06_RS02320;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 453632 454516 . + . ID=gene-SO06_RS02330;Name=SO06_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02330 NZ_MYDG01000001.1 Protein Homology CDS 453632 454516 . + 0 ID=cds-WP_000608659.1;Parent=gene-SO06_RS02330;Dbxref=GenBank:WP_000608659.1;Name=WP_000608659.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=SO06_RS02330;product=D-hexose-6-phosphate mutarotase;protein_id=WP_000608659.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 454615 455472 . - . ID=gene-SO06_RS02335;Name=SO06_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02335 NZ_MYDG01000001.1 Protein Homology CDS 454615 455472 . - 0 ID=cds-WP_023231334.1;Parent=gene-SO06_RS02335;Dbxref=GenBank:WP_023231334.1;Name=WP_023231334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=SO06_RS02335;product=aldo/keto reductase;protein_id=WP_023231334.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 455570 456766 . - . ID=gene-SO06_RS02340;Name=SO06_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02340 NZ_MYDG01000001.1 Protein Homology CDS 455570 456766 . - 0 ID=cds-WP_000029234.1;Parent=gene-SO06_RS02340;Dbxref=GenBank:WP_000029234.1;Name=WP_000029234.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=SO06_RS02340;product=anaerobic sulfatase maturase;protein_id=WP_000029234.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 457056 457802 . - . ID=gene-SO06_RS02345;Name=SO06_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02345 NZ_MYDG01000001.1 Protein Homology CDS 457056 457802 . - 0 ID=cds-WP_000163762.1;Parent=gene-SO06_RS02345;Dbxref=GenBank:WP_000163762.1;Name=WP_000163762.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=SO06_RS02345;product=MipA/OmpV family protein;protein_id=WP_000163762.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 458229 460163 . + . ID=gene-SO06_RS02350;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=SO06_RS02350 NZ_MYDG01000001.1 Protein Homology CDS 458229 460163 . + 0 ID=cds-WP_001518010.1;Parent=gene-SO06_RS02350;Dbxref=GenBank:WP_001518010.1;Name=WP_001518010.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=SO06_RS02350;product=protein kinase YeaG;protein_id=WP_001518010.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 460286 461572 . + . ID=gene-SO06_RS02355;Name=SO06_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02355 NZ_MYDG01000001.1 Protein Homology CDS 460286 461572 . + 0 ID=cds-WP_023258651.1;Parent=gene-SO06_RS02355;Dbxref=GenBank:WP_023258651.1;Name=WP_023258651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=SO06_RS02355;product=YeaH/YhbH family protein;protein_id=WP_023258651.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 461717 461917 . - . ID=gene-SO06_RS24905;Name=SO06_RS24905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24905 NZ_MYDG01000001.1 GeneMarkS-2+ CDS 461717 461917 . - 0 ID=cds-WP_024148491.1;Parent=gene-SO06_RS24905;Dbxref=GenBank:WP_024148491.1;Name=WP_024148491.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS24905;product=hypothetical protein;protein_id=WP_024148491.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 462212 463705 . + . ID=gene-SO06_RS02360;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=SO06_RS02360 NZ_MYDG01000001.1 Protein Homology CDS 462212 463705 . + 0 ID=cds-WP_023182066.1;Parent=gene-SO06_RS02360;Dbxref=GenBank:WP_023182066.1;Name=WP_023182066.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=SO06_RS02360;product=diguanylate cyclase DgcJ;protein_id=WP_023182066.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 463755 464273 . + . ID=gene-SO06_RS02365;Name=SO06_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02365 NZ_MYDG01000001.1 Protein Homology CDS 463755 464273 . + 0 ID=cds-WP_161397179.1;Parent=gene-SO06_RS02365;Dbxref=GenBank:WP_161397179.1;Name=WP_161397179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=SO06_RS02365;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_161397179.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 464418 464525 . - . ID=gene-SO06_RS02375;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=SO06_RS02375 NZ_MYDG01000001.1 Protein Homology CDS 464418 464525 . - 0 ID=cds-WP_000272239.1;Parent=gene-SO06_RS02375;Dbxref=GenBank:WP_000272239.1;Name=WP_000272239.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=SO06_RS02375;product=small membrane protein YoaI;protein_id=WP_000272239.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 464731 465177 . + . ID=gene-SO06_RS02380;Name=SO06_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02380 NZ_MYDG01000001.1 Protein Homology CDS 464731 465177 . + 0 ID=cds-WP_000460698.1;Parent=gene-SO06_RS02380;Dbxref=GenBank:WP_000460698.1;Name=WP_000460698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=SO06_RS02380;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 465157 465951 . - . ID=gene-SO06_RS02385;Name=SO06_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02385 NZ_MYDG01000001.1 Protein Homology CDS 465157 465951 . - 0 ID=cds-WP_048348861.1;Parent=gene-SO06_RS02385;Dbxref=GenBank:WP_048348861.1;Name=WP_048348861.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=SO06_RS02385;product=AraC family transcriptional regulator;protein_id=WP_048348861.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 466052 467236 . + . ID=gene-SO06_RS02390;Name=SO06_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02390 NZ_MYDG01000001.1 Protein Homology CDS 466052 467236 . + 0 ID=cds-WP_000205342.1;Parent=gene-SO06_RS02390;Dbxref=GenBank:WP_000205342.1;Name=WP_000205342.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=SO06_RS02390;product=CynX/NimT family MFS transporter;protein_id=WP_000205342.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 467355 467702 . + . ID=gene-SO06_RS02395;Name=SO06_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02395 NZ_MYDG01000001.1 Protein Homology CDS 467355 467702 . + 0 ID=cds-WP_001222527.1;Parent=gene-SO06_RS02395;Dbxref=GenBank:WP_001222527.1;Name=WP_001222527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=SO06_RS02395;product=DUF488 domain-containing protein;protein_id=WP_001222527.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 467688 467999 . - . ID=gene-SO06_RS02400;Name=SO06_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02400 NZ_MYDG01000001.1 Protein Homology CDS 467688 467999 . - 0 ID=cds-WP_000487126.1;Parent=gene-SO06_RS02400;Dbxref=GenBank:WP_000487126.1;Name=WP_000487126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=SO06_RS02400;product=hypothetical protein;protein_id=WP_000487126.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 468068 468319 . - . ID=gene-SO06_RS02405;Name=SO06_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02405 NZ_MYDG01000001.1 Protein Homology CDS 468068 468319 . - 0 ID=cds-WP_000673492.1;Parent=gene-SO06_RS02405;Dbxref=GenBank:WP_000673492.1;Name=WP_000673492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=SO06_RS02405;product=putative hemolysin;protein_id=WP_000673492.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 468515 468613 . + . ID=gene-SO06_RS24910;Name=SO06_RS24910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24910 NZ_MYDG01000001.1 Protein Homology CDS 468515 468613 . + 0 ID=cds-WP_001589065.1;Parent=gene-SO06_RS24910;Dbxref=GenBank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=SO06_RS24910;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 468752 469000 . - . ID=gene-SO06_RS02410;Name=SO06_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02410 NZ_MYDG01000001.1 Protein Homology CDS 468752 469000 . - 0 ID=cds-WP_000512149.1;Parent=gene-SO06_RS02410;Dbxref=GenBank:WP_000512149.1;Name=WP_000512149.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=SO06_RS02410;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 469314 469955 . - . ID=gene-SO06_RS02420;Name=SO06_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02420 NZ_MYDG01000001.1 Protein Homology CDS 469314 469955 . - 0 ID=cds-WP_001532438.1;Parent=gene-SO06_RS02420;Dbxref=GenBank:WP_001532438.1;Name=WP_001532438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=SO06_RS02420;product=hypothetical protein;protein_id=WP_001532438.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 470185 470367 . - . ID=gene-SO06_RS02425;Name=SO06_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02425 NZ_MYDG01000001.1 Protein Homology CDS 470185 470367 . - 0 ID=cds-WP_000513733.1;Parent=gene-SO06_RS02425;Dbxref=GenBank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=SO06_RS02425;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 470370 470732 . - . ID=gene-SO06_RS02430;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=SO06_RS02430 NZ_MYDG01000001.1 Protein Homology CDS 470370 470732 . - 0 ID=cds-WP_001248993.1;Parent=gene-SO06_RS02430;Dbxref=GenBank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=SO06_RS02430;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248993.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 470905 471543 . - . ID=gene-SO06_RS02440;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=SO06_RS02440 NZ_MYDG01000001.1 Protein Homology CDS 470905 471543 . - 0 ID=cds-WP_000457190.1;Parent=gene-SO06_RS02440;Dbxref=GenBank:WP_000457190.1;Name=WP_000457190.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=SO06_RS02440;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 471740 472285 . - . ID=gene-SO06_RS02445;Name=SO06_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02445 NZ_MYDG01000001.1 Protein Homology CDS 471740 472285 . - 0 ID=cds-WP_000617988.1;Parent=gene-SO06_RS02445;Dbxref=GenBank:WP_000617988.1;Name=WP_000617988.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=SO06_RS02445;product=chorismate mutase;protein_id=WP_000617988.1;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 472368 472522 . + . ID=gene-SO06_RS25415;Name=SO06_RS25415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25415;pseudo=true NZ_MYDG01000001.1 Protein Homology CDS 472368 472522 . + 0 ID=cds-SO06_RS25415;Parent=gene-SO06_RS25415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=SO06_RS25415;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 472601 472849 . + . ID=gene-SO06_RS02455;Name=SO06_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02455 NZ_MYDG01000001.1 Protein Homology CDS 472601 472849 . + 0 ID=cds-WP_000208086.1;Parent=gene-SO06_RS02455;Dbxref=GenBank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=SO06_RS02455;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_000208086.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 473104 473952 . - . ID=gene-SO06_RS02460;Name=SO06_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02460 NZ_MYDG01000001.1 Protein Homology CDS 473104 473952 . - 0 ID=cds-WP_000190260.1;Parent=gene-SO06_RS02460;Dbxref=GenBank:WP_000190260.1;Name=WP_000190260.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=SO06_RS02460;product=MerR family transcriptional regulator;protein_id=WP_000190260.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 474021 474614 . - . ID=gene-SO06_RS02465;Name=SO06_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02465 NZ_MYDG01000001.1 Protein Homology CDS 474021 474614 . - 0 ID=cds-WP_023232223.1;Parent=gene-SO06_RS02465;Dbxref=GenBank:WP_023232223.1;Name=WP_023232223.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=SO06_RS02465;product=helix-turn-helix domain-containing protein;protein_id=WP_023232223.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 474759 475547 . - . ID=gene-SO06_RS02470;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=SO06_RS02470 NZ_MYDG01000001.1 Protein Homology CDS 474759 475547 . - 0 ID=cds-WP_023232224.1;Parent=gene-SO06_RS02470;Dbxref=GenBank:WP_023232224.1;Name=WP_023232224.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=SO06_RS02470;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_023232224.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 475656 476303 . - . ID=gene-SO06_RS02475;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=SO06_RS02475 NZ_MYDG01000001.1 Protein Homology CDS 475656 476303 . - 0 ID=cds-WP_164525745.1;Parent=gene-SO06_RS02475;Dbxref=GenBank:WP_164525745.1;Name=WP_164525745.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=SO06_RS02475;product=metal-binding protein ZinT;protein_id=WP_164525745.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 476415 476491 . - . ID=gene-SO06_RS02480;Name=SO06_RS02480;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS02480 NZ_MYDG01000001.1 tRNAscan-SE tRNA 476415 476491 . - . ID=rna-SO06_RS02480;Parent=gene-SO06_RS02480;anticodon=(pos:complement(476455..476457));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS02480;product=tRNA-Arg NZ_MYDG01000001.1 tRNAscan-SE exon 476415 476491 . - . ID=exon-SO06_RS02480-1;Parent=rna-SO06_RS02480;anticodon=(pos:complement(476455..476457));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS02480;product=tRNA-Arg NZ_MYDG01000001.1 RefSeq gene 476500 476826 . - . ID=gene-SO06_RS02485;Name=SO06_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02485 NZ_MYDG01000001.1 Protein Homology CDS 476500 476826 . - 0 ID=cds-WP_001183699.1;Parent=gene-SO06_RS02485;Dbxref=GenBank:WP_001183699.1;Name=WP_001183699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=SO06_RS02485;product=four-helix bundle copper-binding protein;protein_id=WP_001183699.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 477020 478153 . + . ID=gene-SO06_RS02490;Name=SO06_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02490 NZ_MYDG01000001.1 Protein Homology CDS 477020 478153 . + 0 ID=cds-WP_048348862.1;Parent=gene-SO06_RS02490;Dbxref=GenBank:WP_048348862.1;Name=WP_048348862.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=SO06_RS02490;product=mechanosensitive ion channel family protein;protein_id=WP_048348862.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 478235 478825 . - . ID=gene-SO06_RS02495;Name=SO06_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02495 NZ_MYDG01000001.1 Protein Homology CDS 478235 478825 . - 0 ID=cds-WP_000947459.1;Parent=gene-SO06_RS02495;Dbxref=GenBank:WP_000947459.1;Name=WP_000947459.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=SO06_RS02495;product=ATP-binding cassette domain-containing protein;protein_id=WP_000947459.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 478819 479616 . - . ID=gene-SO06_RS02500;Name=SO06_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02500 NZ_MYDG01000001.1 Protein Homology CDS 478819 479616 . - 0 ID=cds-WP_000950209.1;Parent=gene-SO06_RS02500;Dbxref=GenBank:WP_000950209.1;Name=WP_000950209.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=SO06_RS02500;product=ATP-binding cassette domain-containing protein;protein_id=WP_000950209.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 479610 480422 . - . ID=gene-SO06_RS02505;Name=SO06_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02505 NZ_MYDG01000001.1 Protein Homology CDS 479610 480422 . - 0 ID=cds-WP_000966638.1;Parent=gene-SO06_RS02505;Dbxref=GenBank:WP_000966638.1;Name=WP_000966638.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=SO06_RS02505;product=ABC transporter permease;protein_id=WP_000966638.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 480412 481386 . - . ID=gene-SO06_RS02510;Name=SO06_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02510 NZ_MYDG01000001.1 Protein Homology CDS 480412 481386 . - 0 ID=cds-WP_001520270.1;Parent=gene-SO06_RS02510;Dbxref=GenBank:WP_001520270.1;Name=WP_001520270.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=SO06_RS02510;product=ABC transporter permease;protein_id=WP_001520270.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 481386 483020 . - . ID=gene-SO06_RS02515;Name=SO06_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02515 NZ_MYDG01000001.1 Protein Homology CDS 481386 483020 . - 0 ID=cds-WP_000946087.1;Parent=gene-SO06_RS02515;Dbxref=GenBank:WP_000946087.1;Name=WP_000946087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=SO06_RS02515;product=ABC transporter substrate-binding protein;protein_id=WP_000946087.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 483702 484016 . + . ID=gene-SO06_RS02520;Name=SO06_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02520 NZ_MYDG01000001.1 Protein Homology CDS 483702 484016 . + 0 ID=cds-WP_000182479.1;Parent=gene-SO06_RS02520;Dbxref=GenBank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=SO06_RS02520;product=TRL-like family protein;protein_id=WP_000182479.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 484165 484695 . + . ID=gene-SO06_RS02525;Name=SO06_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02525 NZ_MYDG01000001.1 Protein Homology CDS 484165 484695 . + 0 ID=cds-WP_000929974.1;Parent=gene-SO06_RS02525;Dbxref=GenBank:WP_000929974.1;Name=WP_000929974.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=SO06_RS02525;product=cytochrome b;protein_id=WP_000929974.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 484778 485821 . - . ID=gene-SO06_RS02530;Name=SO06_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02530 NZ_MYDG01000001.1 Protein Homology CDS 484778 485821 . - 0 ID=cds-WP_000761735.1;Parent=gene-SO06_RS02530;Dbxref=GenBank:WP_000761735.1;Name=WP_000761735.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=SO06_RS02530;product=sialidase family protein;protein_id=WP_000761735.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 486160 486627 . - . ID=gene-SO06_RS02535;Name=SO06_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02535 NZ_MYDG01000001.1 Protein Homology CDS 486160 486627 . - 0 ID=cds-WP_001218120.1;Parent=gene-SO06_RS02535;Dbxref=GenBank:WP_001218120.1;Name=WP_001218120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=SO06_RS02535;product=Hsp20 family protein;protein_id=WP_001218120.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 486780 487052 . - . ID=gene-SO06_RS02540;Name=SO06_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02540 NZ_MYDG01000001.1 Protein Homology CDS 486780 487052 . - 0 ID=cds-WP_000927827.1;Parent=gene-SO06_RS02540;Dbxref=GenBank:WP_000927827.1;Name=WP_000927827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=SO06_RS02540;product=hypothetical protein;protein_id=WP_000927827.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 487252 487377 . - . ID=gene-SO06_RS02545;Name=SO06_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02545 NZ_MYDG01000001.1 Protein Homology CDS 487252 487377 . - 0 ID=cds-WP_000758947.1;Parent=gene-SO06_RS02545;Dbxref=GenBank:WP_000758947.1;Name=WP_000758947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748351.1;locus_tag=SO06_RS02545;product=lipoprotein;protein_id=WP_000758947.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 487755 488099 . + . ID=gene-SO06_RS02550;Name=SO06_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02550 NZ_MYDG01000001.1 Protein Homology CDS 487755 488099 . + 0 ID=cds-WP_000977722.1;Parent=gene-SO06_RS02550;Dbxref=GenBank:WP_000977722.1;Name=WP_000977722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=SO06_RS02550;product=c-type lysozyme inhibitor;protein_id=WP_000977722.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 488854 488930 . - . ID=gene-SO06_RS02555;Name=SO06_RS02555;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS02555 NZ_MYDG01000001.1 tRNAscan-SE tRNA 488854 488930 . - . ID=rna-SO06_RS02555;Parent=gene-SO06_RS02555;anticodon=(pos:complement(488894..488896));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS02555;product=tRNA-Arg NZ_MYDG01000001.1 tRNAscan-SE exon 488854 488930 . - . ID=exon-SO06_RS02555-1;Parent=rna-SO06_RS02555;anticodon=(pos:complement(488894..488896));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS02555;product=tRNA-Arg NZ_MYDG01000001.1 RefSeq gene 489321 489878 . - . ID=gene-SO06_RS02560;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=SO06_RS02560 NZ_MYDG01000001.1 Protein Homology CDS 489321 489878 . - 0 ID=cds-WP_000789471.1;Parent=gene-SO06_RS02560;Dbxref=GenBank:WP_000789471.1;Name=WP_000789471.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=SO06_RS02560;product=virulence membrane protein PagC;protein_id=WP_000789471.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 490683 490946 . + . ID=gene-SO06_RS02575;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=SO06_RS02575 NZ_MYDG01000001.1 Protein Homology CDS 490683 490946 . + 0 ID=cds-WP_024148494.1;Parent=gene-SO06_RS02575;Dbxref=GenBank:WP_024148494.1;Name=WP_024148494.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=SO06_RS02575;product=virulence protein PagD;protein_id=WP_024148494.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 491078 491290 . + . ID=gene-SO06_RS02580;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=SO06_RS02580 NZ_MYDG01000001.1 Protein Homology CDS 491078 491290 . + 0 ID=cds-WP_001537306.1;Parent=gene-SO06_RS02580;Dbxref=GenBank:WP_001537306.1;Name=WP_001537306.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=SO06_RS02580;product=cold shock-like protein CspF;protein_id=WP_001537306.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 491705 492226 . + . ID=gene-SO06_RS02585;Name=SO06_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02585 NZ_MYDG01000001.1 Protein Homology CDS 491705 492226 . + 0 ID=cds-WP_001520581.1;Parent=gene-SO06_RS02585;Dbxref=GenBank:WP_001520581.1;Name=WP_001520581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=SO06_RS02585;product=RICIN domain-containing protein;protein_id=WP_001520581.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 492407 492646 . + . ID=gene-SO06_RS02590;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=SO06_RS02590 NZ_MYDG01000001.1 Protein Homology CDS 492407 492646 . + 0 ID=cds-WP_000497451.1;Parent=gene-SO06_RS02590;Dbxref=GenBank:WP_000497451.1;Name=WP_000497451.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=SO06_RS02590;product=virulence protein MsgA;protein_id=WP_000497451.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 493135 493923 . + . ID=gene-SO06_RS02600;Name=envF;gbkey=Gene;gene=envF;gene_biotype=protein_coding;locus_tag=SO06_RS02600 NZ_MYDG01000001.1 Protein Homology CDS 493135 493923 . + 0 ID=cds-WP_001033410.1;Parent=gene-SO06_RS02600;Dbxref=GenBank:WP_001033410.1;Name=WP_001033410.1;gbkey=CDS;gene=envF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=SO06_RS02600;product=putative envelope lipoprotein EnvF;protein_id=WP_001033410.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 494245 494451 . + . ID=gene-SO06_RS25660;Name=SO06_RS25660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25660 NZ_MYDG01000001.1 Protein Homology CDS 494245 494451 . + 0 ID=cds-WP_048348863.1;Parent=gene-SO06_RS25660;Dbxref=GenBank:WP_048348863.1;Name=WP_048348863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787631.1;locus_tag=SO06_RS25660;product=hypothetical protein;protein_id=WP_048348863.1;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 494613 494714 . + . ID=gene-SO06_RS24915;Name=SO06_RS24915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS24915;partial=true;pseudo=true;start_range=.,494613 NZ_MYDG01000001.1 Protein Homology CDS 494613 494714 . + 0 ID=cds-SO06_RS24915;Parent=gene-SO06_RS24915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143187.1;locus_tag=SO06_RS24915;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,494613;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 495109 495291 . + . ID=gene-SO06_RS02615;Name=SO06_RS02615;end_range=495291,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS02615;partial=true;pseudo=true NZ_MYDG01000001.1 Protein Homology CDS 495109 495291 . + 0 ID=cds-SO06_RS02615;Parent=gene-SO06_RS02615;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=495291,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539657.1;locus_tag=SO06_RS02615;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 495577 496701 . - . ID=gene-SO06_RS02625;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=SO06_RS02625 NZ_MYDG01000001.1 Protein Homology CDS 495577 496701 . - 0 ID=cds-WP_000917279.1;Parent=gene-SO06_RS02625;Dbxref=GenBank:WP_000917279.1;Name=WP_000917279.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=SO06_RS02625;product=type III secretion system effector SopF;protein_id=WP_000917279.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 497159 498409 . - . ID=gene-SO06_RS02630;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=SO06_RS02630 NZ_MYDG01000001.1 Protein Homology CDS 497159 498409 . - 0 ID=cds-WP_000444508.1;Parent=gene-SO06_RS02630;Dbxref=GenBank:WP_000444508.1;Name=WP_000444508.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=SO06_RS02630;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444508.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 498581 499246 . + . ID=gene-SO06_RS02635;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=SO06_RS02635 NZ_MYDG01000001.1 Protein Homology CDS 498581 499246 . + 0 ID=cds-WP_023232466.1;Parent=gene-SO06_RS02635;Dbxref=GenBank:WP_023232466.1;Name=WP_023232466.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=SO06_RS02635;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_023232466.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 499243 499572 . + . ID=gene-SO06_RS02640;Name=SO06_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02640 NZ_MYDG01000001.1 Protein Homology CDS 499243 499572 . + 0 ID=cds-WP_000825956.1;Parent=gene-SO06_RS02640;Dbxref=GenBank:WP_000825956.1;Name=WP_000825956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=SO06_RS02640;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825956.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 499584 500045 . + . ID=gene-SO06_RS02645;Name=SO06_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02645 NZ_MYDG01000001.1 Protein Homology CDS 499584 500045 . + 0 ID=cds-WP_000476071.1;Parent=gene-SO06_RS02645;Dbxref=GenBank:WP_000476071.1;Name=WP_000476071.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=SO06_RS02645;product=NUDIX hydrolase;protein_id=WP_000476071.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 500099 501205 . + . ID=gene-SO06_RS02650;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=SO06_RS02650 NZ_MYDG01000001.1 Protein Homology CDS 500099 501205 . + 0 ID=cds-WP_000004540.1;Parent=gene-SO06_RS02650;Dbxref=GenBank:WP_000004540.1;Name=WP_000004540.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=SO06_RS02650;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_000004540.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 501292 501933 . + . ID=gene-SO06_RS02655;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=SO06_RS02655 NZ_MYDG01000001.1 Protein Homology CDS 501292 501933 . + 0 ID=cds-WP_001519653.1;Parent=gene-SO06_RS02655;Dbxref=GenBank:WP_001519653.1;Name=WP_001519653.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=SO06_RS02655;product=high frequency lysogenization protein HflD;protein_id=WP_001519653.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 501937 503307 . + . ID=gene-SO06_RS02660;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=SO06_RS02660 NZ_MYDG01000001.1 Protein Homology CDS 501937 503307 . + 0 ID=cds-WP_023232467.1;Parent=gene-SO06_RS02660;Dbxref=GenBank:WP_023232467.1;Name=WP_023232467.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=SO06_RS02660;product=adenylosuccinate lyase;protein_id=WP_023232467.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 503434 504105 . + . ID=gene-SO06_RS02665;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=SO06_RS02665 NZ_MYDG01000001.1 Protein Homology CDS 503434 504105 . + 0 ID=cds-WP_001537766.1;Parent=gene-SO06_RS02665;Dbxref=GenBank:WP_001537766.1;Name=WP_001537766.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=SO06_RS02665;product=two-component system response regulator PhoP;protein_id=WP_001537766.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 504105 505568 . + . ID=gene-SO06_RS02670;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=SO06_RS02670 NZ_MYDG01000001.1 Protein Homology CDS 504105 505568 . + 0 ID=cds-WP_001031687.1;Parent=gene-SO06_RS02670;Dbxref=GenBank:WP_001031687.1;Name=WP_001031687.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=SO06_RS02670;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031687.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 505649 506770 . + . ID=gene-SO06_RS02675;Name=SO06_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02675 NZ_MYDG01000001.1 Protein Homology CDS 505649 506770 . + 0 ID=cds-WP_023232468.1;Parent=gene-SO06_RS02675;Dbxref=GenBank:WP_023232468.1;Name=WP_023232468.1;Ontology_term=GO:0043687,GO:0008198,GO:0016706;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=SO06_RS02675;product=ribosomal protein uL16 3-hydroxylase;protein_id=WP_023232468.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 506810 508144 . - . ID=gene-SO06_RS02680;Name=SO06_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02680 NZ_MYDG01000001.1 Protein Homology CDS 506810 508144 . - 0 ID=cds-WP_023232469.1;Parent=gene-SO06_RS02680;Dbxref=GenBank:WP_023232469.1;Name=WP_023232469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=SO06_RS02680;product=periplasmic protein;protein_id=WP_023232469.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 508148 509377 . - . ID=gene-SO06_RS02685;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=SO06_RS02685 NZ_MYDG01000001.1 Protein Homology CDS 508148 509377 . - 0 ID=cds-WP_000359412.1;Parent=gene-SO06_RS02685;Dbxref=GenBank:WP_000359412.1;Name=WP_000359412.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=SO06_RS02685;product=peptidase T;protein_id=WP_000359412.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 509628 510764 . + . ID=gene-SO06_RS02695;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=SO06_RS02695 NZ_MYDG01000001.1 Protein Homology CDS 509628 510764 . + 0 ID=cds-WP_048348864.1;Parent=gene-SO06_RS02695;Dbxref=GenBank:WP_048348864.1;Name=WP_048348864.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=SO06_RS02695;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_048348864.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 510748 511611 . + . ID=gene-SO06_RS02700;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=SO06_RS02700 NZ_MYDG01000001.1 Protein Homology CDS 510748 511611 . + 0 ID=cds-WP_000799391.1;Parent=gene-SO06_RS02700;Dbxref=GenBank:WP_000799391.1;Name=WP_000799391.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=SO06_RS02700;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799391.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 511940 512950 . + . ID=gene-SO06_RS02705;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=SO06_RS02705 NZ_MYDG01000001.1 Protein Homology CDS 511940 512950 . + 0 ID=cds-WP_023232336.1;Parent=gene-SO06_RS02705;Dbxref=GenBank:WP_023232336.1;Name=WP_023232336.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=SO06_RS02705;product=SPI-2 type III secretion system effector SifA;protein_id=WP_023232336.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 513266 514045 . + . ID=gene-SO06_RS02710;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=SO06_RS02710 NZ_MYDG01000001.1 Protein Homology CDS 513266 514045 . + 0 ID=cds-WP_000580299.1;Parent=gene-SO06_RS02710;Dbxref=GenBank:WP_000580299.1;Name=WP_000580299.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=SO06_RS02710;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 514070 515116 . + . ID=gene-SO06_RS02715;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=SO06_RS02715 NZ_MYDG01000001.1 Protein Homology CDS 514070 515116 . + 0 ID=cds-WP_000759329.1;Parent=gene-SO06_RS02715;Dbxref=GenBank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=SO06_RS02715;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 515198 516019 . - . ID=gene-SO06_RS02720;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=SO06_RS02720 NZ_MYDG01000001.1 Protein Homology CDS 515198 516019 . - 0 ID=cds-WP_001191856.1;Parent=gene-SO06_RS02720;Dbxref=GenBank:WP_001191856.1;Name=WP_001191856.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=SO06_RS02720;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_001191856.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 516038 516949 . - . ID=gene-SO06_RS02725;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=SO06_RS02725 NZ_MYDG01000001.1 Protein Homology CDS 516038 516949 . - 0 ID=cds-WP_000291330.1;Parent=gene-SO06_RS02725;Dbxref=GenBank:WP_000291330.1;Name=WP_000291330.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=SO06_RS02725;product=N-acetylglucosamine kinase;protein_id=WP_000291330.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 516978 518222 . - . ID=gene-SO06_RS02730;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=SO06_RS02730 NZ_MYDG01000001.1 Protein Homology CDS 516978 518222 . - 0 ID=cds-WP_000168091.1;Parent=gene-SO06_RS02730;Dbxref=GenBank:WP_000168091.1;Name=WP_000168091.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=SO06_RS02730;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168091.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 518222 518923 . - . ID=gene-SO06_RS02735;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=SO06_RS02735 NZ_MYDG01000001.1 Protein Homology CDS 518222 518923 . - 0 ID=cds-WP_001033714.1;Parent=gene-SO06_RS02735;Dbxref=GenBank:WP_001033714.1;Name=WP_001033714.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=SO06_RS02735;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 518916 520115 . - . ID=gene-SO06_RS02740;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=SO06_RS02740 NZ_MYDG01000001.1 Protein Homology CDS 518916 520115 . - 0 ID=cds-WP_001518787.1;Parent=gene-SO06_RS02740;Dbxref=GenBank:WP_001518787.1;Name=WP_001518787.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=SO06_RS02740;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001518787.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 520453 523899 . + . ID=gene-SO06_RS02745;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=SO06_RS02745 NZ_MYDG01000001.1 Protein Homology CDS 520453 523899 . + 0 ID=cds-WP_001114323.1;Parent=gene-SO06_RS02745;Dbxref=GenBank:WP_001114323.1;Name=WP_001114323.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=SO06_RS02745;product=transcription-repair coupling factor;protein_id=WP_001114323.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 524048 525013 . + . ID=gene-SO06_RS02750;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=SO06_RS02750 NZ_MYDG01000001.1 Protein Homology CDS 524048 525013 . + 0 ID=cds-WP_000482967.1;Parent=gene-SO06_RS02750;Dbxref=GenBank:WP_000482967.1;Name=WP_000482967.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=SO06_RS02750;product=L%2CD-transpeptidase LdtC;protein_id=WP_000482967.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 525110 525367 . - . ID=gene-SO06_RS02755;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=SO06_RS02755 NZ_MYDG01000001.1 Protein Homology CDS 525110 525367 . - 0 ID=cds-WP_000800159.1;Parent=gene-SO06_RS02755;Dbxref=GenBank:WP_000800159.1;Name=WP_000800159.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=SO06_RS02755;product=multiple stress resistance protein BhsA;protein_id=WP_000800159.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 525609 526244 . + . ID=gene-SO06_RS02760;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=SO06_RS02760 NZ_MYDG01000001.1 Protein Homology CDS 525609 526244 . + 0 ID=cds-WP_000205986.1;Parent=gene-SO06_RS02760;Dbxref=GenBank:WP_000205986.1;Name=WP_000205986.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=SO06_RS02760;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000205986.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 526319 526858 . - . ID=gene-SO06_RS02765;Name=SO06_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02765 NZ_MYDG01000001.1 Protein Homology CDS 526319 526858 . - 0 ID=cds-WP_001043449.1;Parent=gene-SO06_RS02765;Dbxref=GenBank:WP_001043449.1;Name=WP_001043449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=SO06_RS02765;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043449.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 527037 528341 . - . ID=gene-SO06_RS02770;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=SO06_RS02770 NZ_MYDG01000001.1 Protein Homology CDS 527037 528341 . - 0 ID=cds-WP_000211053.1;Parent=gene-SO06_RS02770;Dbxref=GenBank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=SO06_RS02770;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 528596 529138 . - . ID=gene-SO06_RS02775;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=SO06_RS02775 NZ_MYDG01000001.1 Protein Homology CDS 528596 529138 . - 0 ID=cds-WP_000587943.1;Parent=gene-SO06_RS02775;Dbxref=GenBank:WP_000587943.1;Name=WP_000587943.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=SO06_RS02775;product=alpha/beta hydrolase YcfP;protein_id=WP_000587943.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 529163 530188 . - . ID=gene-SO06_RS02780;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=SO06_RS02780 NZ_MYDG01000001.1 Protein Homology CDS 529163 530188 . - 0 ID=cds-WP_000529340.1;Parent=gene-SO06_RS02780;Dbxref=GenBank:WP_000529340.1;Name=WP_000529340.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=SO06_RS02780;product=beta-N-acetylhexosaminidase;protein_id=WP_000529340.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 530199 531023 . - . ID=gene-SO06_RS02785;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=SO06_RS02785 NZ_MYDG01000001.1 Protein Homology CDS 530199 531023 . - 0 ID=cds-WP_023232569.1;Parent=gene-SO06_RS02785;Dbxref=GenBank:WP_023232569.1;Name=WP_023232569.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=SO06_RS02785;product=thiamine kinase;protein_id=WP_023232569.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 531004 531642 . - . ID=gene-SO06_RS02790;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=SO06_RS02790 NZ_MYDG01000001.1 Protein Homology CDS 531004 531642 . - 0 ID=cds-WP_000164359.1;Parent=gene-SO06_RS02790;Dbxref=GenBank:WP_000164359.1;Name=WP_000164359.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=SO06_RS02790;product=penicillin-binding protein activator LpoB;protein_id=WP_000164359.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 531656 532030 . - . ID=gene-SO06_RS02795;Name=SO06_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02795 NZ_MYDG01000001.1 Protein Homology CDS 531656 532030 . - 0 ID=cds-WP_000589563.1;Parent=gene-SO06_RS02795;Dbxref=GenBank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=SO06_RS02795;product=YcfL family protein;protein_id=WP_000589563.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 532033 532392 . - . ID=gene-SO06_RS02800;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=SO06_RS02800 NZ_MYDG01000001.1 Protein Homology CDS 532033 532392 . - 0 ID=cds-WP_001532068.1;Parent=gene-SO06_RS02800;Dbxref=GenBank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=SO06_RS02800;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 532734 534908 . + . ID=gene-SO06_RS02805;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=SO06_RS02805 NZ_MYDG01000001.1 Protein Homology CDS 532734 534908 . + 0 ID=cds-WP_020839417.1;Parent=gene-SO06_RS02805;Dbxref=GenBank:WP_020839417.1;Name=WP_020839417.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=SO06_RS02805;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_020839417.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 534993 536426 . - . ID=gene-SO06_RS02810;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=SO06_RS02810 NZ_MYDG01000001.1 Protein Homology CDS 534993 536426 . - 0 ID=cds-WP_000475705.1;Parent=gene-SO06_RS02810;Dbxref=GenBank:WP_000475705.1;Name=WP_000475705.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=SO06_RS02810;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475705.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 536721 537518 . - . ID=gene-SO06_RS02815;Name=SO06_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02815 NZ_MYDG01000001.1 Protein Homology CDS 536721 537518 . - 0 ID=cds-WP_000480277.1;Parent=gene-SO06_RS02815;Dbxref=GenBank:WP_000480277.1;Name=WP_000480277.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=SO06_RS02815;product=metal-dependent hydrolase;protein_id=WP_000480277.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 537529 538533 . - . ID=gene-SO06_RS02820;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=SO06_RS02820 NZ_MYDG01000001.1 Protein Homology CDS 537529 538533 . - 0 ID=cds-WP_000872450.1;Parent=gene-SO06_RS02820;Dbxref=GenBank:WP_000872450.1;Name=WP_000872450.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=SO06_RS02820;product=DNA polymerase III subunit delta';protein_id=WP_000872450.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 538530 539171 . - . ID=gene-SO06_RS02825;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=SO06_RS02825 NZ_MYDG01000001.1 Protein Homology CDS 538530 539171 . - 0 ID=cds-WP_000535396.1;Parent=gene-SO06_RS02825;Dbxref=GenBank:WP_000535396.1;Name=WP_000535396.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=SO06_RS02825;product=dTMP kinase;protein_id=WP_000535396.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 539161 540183 . - . ID=gene-SO06_RS02830;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=SO06_RS02830 NZ_MYDG01000001.1 Protein Homology CDS 539161 540183 . - 0 ID=cds-WP_000736459.1;Parent=gene-SO06_RS02830;Dbxref=GenBank:WP_000736459.1;Name=WP_000736459.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=SO06_RS02830;product=cell division protein YceG;protein_id=WP_000736459.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 540186 540995 . - . ID=gene-SO06_RS02835;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=SO06_RS02835 NZ_MYDG01000001.1 Protein Homology CDS 540186 540995 . - 0 ID=cds-WP_023232719.1;Parent=gene-SO06_RS02835;Dbxref=GenBank:WP_023232719.1;Name=WP_023232719.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=SO06_RS02835;product=aminodeoxychorismate lyase;protein_id=WP_023232719.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 541119 542360 . - . ID=gene-SO06_RS02840;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=SO06_RS02840 NZ_MYDG01000001.1 Protein Homology CDS 541119 542360 . - 0 ID=cds-WP_000044664.1;Parent=gene-SO06_RS02840;Dbxref=GenBank:WP_000044664.1;Name=WP_000044664.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=SO06_RS02840;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044664.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 542446 542682 . - . ID=gene-SO06_RS02845;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=SO06_RS02845 NZ_MYDG01000001.1 Protein Homology CDS 542446 542682 . - 0 ID=cds-WP_000103754.1;Parent=gene-SO06_RS02845;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=SO06_RS02845;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 542838 543572 . - . ID=gene-SO06_RS02850;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=SO06_RS02850 NZ_MYDG01000001.1 Protein Homology CDS 542838 543572 . - 0 ID=cds-WP_000007236.1;Parent=gene-SO06_RS02850;Dbxref=GenBank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=SO06_RS02850;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 543585 544514 . - . ID=gene-SO06_RS02855;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=SO06_RS02855 NZ_MYDG01000001.1 Protein Homology CDS 543585 544514 . - 0 ID=cds-WP_023232720.1;Parent=gene-SO06_RS02855;Dbxref=GenBank:WP_023232720.1;Name=WP_023232720.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=SO06_RS02855;product=ACP S-malonyltransferase;protein_id=WP_023232720.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 544530 545483 . - . ID=gene-SO06_RS02860;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=SO06_RS02860 NZ_MYDG01000001.1 Protein Homology CDS 544530 545483 . - 0 ID=cds-WP_000288148.1;Parent=gene-SO06_RS02860;Dbxref=GenBank:WP_000288148.1;Name=WP_000288148.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=SO06_RS02860;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288148.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 545563 546642 . - . ID=gene-SO06_RS02865;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=SO06_RS02865 NZ_MYDG01000001.1 Protein Homology CDS 545563 546642 . - 0 ID=cds-WP_001518286.1;Parent=gene-SO06_RS02865;Dbxref=GenBank:WP_001518286.1;Name=WP_001518286.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=SO06_RS02865;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 546776 546949 . - . ID=gene-SO06_RS02870;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=SO06_RS02870 NZ_MYDG01000001.1 Protein Homology CDS 546776 546949 . - 0 ID=cds-WP_023232721.1;Parent=gene-SO06_RS02870;Dbxref=GenBank:WP_023232721.1;Name=WP_023232721.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=SO06_RS02870;product=50S ribosomal protein L32;protein_id=WP_023232721.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 547001 547522 . - . ID=gene-SO06_RS02875;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=SO06_RS02875 NZ_MYDG01000001.1 Protein Homology CDS 547001 547522 . - 0 ID=cds-WP_001174492.1;Parent=gene-SO06_RS02875;Dbxref=GenBank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=SO06_RS02875;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 547720 548304 . + . ID=gene-SO06_RS02880;Name=SO06_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02880 NZ_MYDG01000001.1 Protein Homology CDS 547720 548304 . + 0 ID=cds-WP_001137607.1;Parent=gene-SO06_RS02880;Dbxref=GenBank:WP_001137607.1;Name=WP_001137607.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=SO06_RS02880;product=Maf family protein;protein_id=WP_001137607.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 548376 548600 . - . ID=gene-SO06_RS02885;Name=SO06_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02885 NZ_MYDG01000001.1 GeneMarkS-2+ CDS 548376 548600 . - 0 ID=cds-WP_023232722.1;Parent=gene-SO06_RS02885;Dbxref=GenBank:WP_023232722.1;Name=WP_023232722.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS02885;product=hypothetical protein;protein_id=WP_023232722.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 548803 549546 . - . ID=gene-SO06_RS02890;Name=SO06_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02890 NZ_MYDG01000001.1 Protein Homology CDS 548803 549546 . - 0 ID=cds-WP_077248367.1;Parent=gene-SO06_RS02890;Dbxref=GenBank:WP_077248367.1;Name=WP_077248367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=SO06_RS02890;product=DUF3053 domain-containing protein;protein_id=WP_077248367.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 549702 550661 . - . ID=gene-SO06_RS02895;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=SO06_RS02895 NZ_MYDG01000001.1 Protein Homology CDS 549702 550661 . - 0 ID=cds-WP_000846319.1;Parent=gene-SO06_RS02895;Dbxref=GenBank:WP_000846319.1;Name=WP_000846319.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=SO06_RS02895;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846319.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 551235 554438 . + . ID=gene-SO06_RS02905;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=SO06_RS02905 NZ_MYDG01000001.1 Protein Homology CDS 551235 554438 . + 0 ID=cds-WP_070793861.1;Parent=gene-SO06_RS02905;Dbxref=GenBank:WP_070793861.1;Name=WP_070793861.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=SO06_RS02905;product=ribonuclease E;protein_id=WP_070793861.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 554695 555648 . - . ID=gene-SO06_RS02915;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=SO06_RS02915 NZ_MYDG01000001.1 Protein Homology CDS 554695 555648 . - 0 ID=cds-WP_001223032.1;Parent=gene-SO06_RS02915;Dbxref=GenBank:WP_001223032.1;Name=WP_001223032.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=SO06_RS02915;product=flagellar hook-associated protein FlgL;protein_id=WP_001223032.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 555663 557324 . - . ID=gene-SO06_RS02920;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=SO06_RS02920 NZ_MYDG01000001.1 Protein Homology CDS 555663 557324 . - 0 ID=cds-WP_000096425.1;Parent=gene-SO06_RS02920;Dbxref=GenBank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=SO06_RS02920;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 557389 558339 . - . ID=gene-SO06_RS02925;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=SO06_RS02925 NZ_MYDG01000001.1 Protein Homology CDS 557389 558339 . - 0 ID=cds-WP_000578685.1;Parent=gene-SO06_RS02925;Dbxref=GenBank:WP_000578685.1;Name=WP_000578685.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=SO06_RS02925;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_000578685.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 558339 559436 . - . ID=gene-SO06_RS02930;Name=SO06_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02930 NZ_MYDG01000001.1 Protein Homology CDS 558339 559436 . - 0 ID=cds-WP_001518955.1;Parent=gene-SO06_RS02930;Dbxref=GenBank:WP_001518955.1;Name=WP_001518955.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=SO06_RS02930;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001518955.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 559448 560146 . - . ID=gene-SO06_RS02935;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=SO06_RS02935 NZ_MYDG01000001.1 Protein Homology CDS 559448 560146 . - 0 ID=cds-WP_001174897.1;Parent=gene-SO06_RS02935;Dbxref=GenBank:WP_001174897.1;Name=WP_001174897.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=SO06_RS02935;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 560201 560983 . - . ID=gene-SO06_RS02940;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=SO06_RS02940 NZ_MYDG01000001.1 Protein Homology CDS 560201 560983 . - 0 ID=cds-WP_080204156.1;Parent=gene-SO06_RS02940;Dbxref=GenBank:WP_080204156.1;Name=WP_080204156.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=SO06_RS02940;product=flagellar basal-body rod protein FlgG;protein_id=WP_080204156.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 560997 561752 . - . ID=gene-SO06_RS02945;Name=SO06_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02945 NZ_MYDG01000001.1 Protein Homology CDS 560997 561752 . - 0 ID=cds-WP_000349278.1;Parent=gene-SO06_RS02945;Dbxref=GenBank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=SO06_RS02945;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 561773 562990 . - . ID=gene-SO06_RS02950;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=SO06_RS02950 NZ_MYDG01000001.1 Protein Homology CDS 561773 562990 . - 0 ID=cds-WP_017440965.1;Parent=gene-SO06_RS02950;Dbxref=GenBank:WP_017440965.1;Name=WP_017440965.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=SO06_RS02950;product=flagellar hook protein FlgE;protein_id=WP_017440965.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 563017 563715 . - . ID=gene-SO06_RS02955;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=SO06_RS02955 NZ_MYDG01000001.1 Protein Homology CDS 563017 563715 . - 0 ID=cds-WP_000020450.1;Parent=gene-SO06_RS02955;Dbxref=GenBank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=SO06_RS02955;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 563727 564131 . - . ID=gene-SO06_RS02960;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=SO06_RS02960 NZ_MYDG01000001.1 Protein Homology CDS 563727 564131 . - 0 ID=cds-WP_001196448.1;Parent=gene-SO06_RS02960;Dbxref=GenBank:WP_001196448.1;Name=WP_001196448.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=SO06_RS02960;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 564135 564551 . - . ID=gene-SO06_RS02965;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=SO06_RS02965 NZ_MYDG01000001.1 Protein Homology CDS 564135 564551 . - 0 ID=cds-WP_000887043.1;Parent=gene-SO06_RS02965;Dbxref=GenBank:WP_000887043.1;Name=WP_000887043.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=SO06_RS02965;product=flagellar basal body rod protein FlgB;protein_id=WP_000887043.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 564708 565367 . + . ID=gene-SO06_RS02970;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=SO06_RS02970 NZ_MYDG01000001.1 Protein Homology CDS 564708 565367 . + 0 ID=cds-WP_001194082.1;Parent=gene-SO06_RS02970;Dbxref=GenBank:WP_001194082.1;Name=WP_001194082.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=SO06_RS02970;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_001194082.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 565459 565752 . + . ID=gene-SO06_RS02975;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=SO06_RS02975 NZ_MYDG01000001.1 Protein Homology CDS 565459 565752 . + 0 ID=cds-WP_000020893.1;Parent=gene-SO06_RS02975;Dbxref=GenBank:WP_000020893.1;Name=WP_000020893.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=SO06_RS02975;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020893.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 565757 566179 . + . ID=gene-SO06_RS02980;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=SO06_RS02980 NZ_MYDG01000001.1 Protein Homology CDS 565757 566179 . + 0 ID=cds-WP_000197547.1;Parent=gene-SO06_RS02980;Dbxref=GenBank:WP_000197547.1;Name=WP_000197547.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=SO06_RS02980;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197547.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 566261 567796 . - . ID=gene-SO06_RS02985;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=SO06_RS02985 NZ_MYDG01000001.1 Protein Homology CDS 566261 567796 . - 0 ID=cds-WP_001537775.1;Parent=gene-SO06_RS02985;Dbxref=GenBank:WP_001537775.1;Name=WP_001537775.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=SO06_RS02985;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001537775.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 568100 569023 . - . ID=gene-SO06_RS02990;Name=SO06_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02990 NZ_MYDG01000001.1 Protein Homology CDS 568100 569023 . - 0 ID=cds-WP_001259728.1;Parent=gene-SO06_RS02990;Dbxref=GenBank:WP_001259728.1;Name=WP_001259728.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=SO06_RS02990;product=Gfo/Idh/MocA family protein;protein_id=WP_001259728.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 569025 569672 . - . ID=gene-SO06_RS02995;Name=SO06_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS02995 NZ_MYDG01000001.1 Protein Homology CDS 569025 569672 . - 0 ID=cds-WP_000873048.1;Parent=gene-SO06_RS02995;Dbxref=GenBank:WP_000873048.1;Name=WP_000873048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=SO06_RS02995;product=YceH family protein;protein_id=WP_000873048.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 569708 570292 . - . ID=gene-SO06_RS03000;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=SO06_RS03000 NZ_MYDG01000001.1 Protein Homology CDS 569708 570292 . - 0 ID=cds-WP_000468204.1;Parent=gene-SO06_RS03000;Dbxref=GenBank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=SO06_RS03000;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 570529 571737 . + . ID=gene-SO06_RS03005;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=SO06_RS03005 NZ_MYDG01000001.1 Protein Homology CDS 570529 571737 . + 0 ID=cds-WP_080204157.1;Parent=gene-SO06_RS03005;Dbxref=GenBank:WP_080204157.1;Name=WP_080204157.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=SO06_RS03005;product=multidrug efflux MFS transporter MdtH;protein_id=WP_080204157.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 571801 572448 . + . ID=gene-SO06_RS03010;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=SO06_RS03010 NZ_MYDG01000001.1 Protein Homology CDS 571801 572448 . + 0 ID=cds-WP_000780893.1;Parent=gene-SO06_RS03010;Dbxref=GenBank:WP_000780893.1;Name=WP_000780893.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=SO06_RS03010;product=glutaredoxin 2;protein_id=WP_000780893.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 572573 573133 . + . ID=gene-SO06_RS03015;Name=SO06_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03015 NZ_MYDG01000001.1 Protein Homology CDS 572573 573133 . + 0 ID=cds-WP_000713057.1;Parent=gene-SO06_RS03015;Dbxref=GenBank:WP_000713057.1;Name=WP_000713057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=SO06_RS03015;product=lipoprotein;protein_id=WP_000713057.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 573238 574284 . + . ID=gene-SO06_RS03020;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=SO06_RS03020 NZ_MYDG01000001.1 Protein Homology CDS 573238 574284 . + 0 ID=cds-WP_000126604.1;Parent=gene-SO06_RS03020;Dbxref=GenBank:WP_000126604.1;Name=WP_000126604.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=SO06_RS03020;product=dihydroorotase;protein_id=WP_000126604.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 574358 574603 . + . ID=gene-SO06_RS03025;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=SO06_RS03025 NZ_MYDG01000001.1 Protein Homology CDS 574358 574603 . + 0 ID=cds-WP_001217763.1;Parent=gene-SO06_RS03025;Dbxref=GenBank:WP_001217763.1;Name=WP_001217763.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=SO06_RS03025;product=DNA damage-inducible protein I;protein_id=WP_001217763.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 574893 575147 . + . ID=gene-SO06_RS03030;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=SO06_RS03030 NZ_MYDG01000001.1 Protein Homology CDS 574893 575147 . + 0 ID=cds-WP_000414441.1;Parent=gene-SO06_RS03030;Dbxref=GenBank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=SO06_RS03030;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 575260 576378 . + . ID=gene-SO06_RS03035;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=SO06_RS03035 NZ_MYDG01000001.1 Protein Homology CDS 575260 576378 . + 0 ID=cds-WP_001524750.1;Parent=gene-SO06_RS03035;Dbxref=GenBank:WP_001524750.1;Name=WP_001524750.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=SO06_RS03035;product=N-methyl-L-tryptophan oxidase;protein_id=WP_001524750.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 576419 576532 . + . ID=gene-SO06_RS03040;Name=SO06_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03040 NZ_MYDG01000001.1 Protein Homology CDS 576419 576532 . + 0 ID=cds-WP_001253282.1;Parent=gene-SO06_RS03040;Dbxref=GenBank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=SO06_RS03040;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 576795 577367 . + . ID=gene-SO06_RS03050;Name=SO06_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03050 NZ_MYDG01000001.1 Protein Homology CDS 576795 577367 . + 0 ID=cds-WP_001159791.1;Parent=gene-SO06_RS03050;Dbxref=GenBank:WP_001159791.1;Name=WP_001159791.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=SO06_RS03050;product=cytochrome b;protein_id=WP_001159791.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 577364 577939 . + . ID=gene-SO06_RS03055;Name=SO06_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03055 NZ_MYDG01000001.1 Protein Homology CDS 577364 577939 . + 0 ID=cds-WP_000739886.1;Parent=gene-SO06_RS03055;Dbxref=GenBank:WP_000739886.1;Name=WP_000739886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=SO06_RS03055;product=YceI family protein;protein_id=WP_000739886.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 577991 579043 . - . ID=gene-SO06_RS03060;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;gene_synonym=yceA;locus_tag=SO06_RS03060 NZ_MYDG01000001.1 Protein Homology CDS 577991 579043 . - 0 ID=cds-WP_080204158.1;Parent=gene-SO06_RS03060;Dbxref=GenBank:WP_080204158.1;Name=WP_080204158.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=SO06_RS03060;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;protein_id=WP_080204158.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 579263 580183 . + . ID=gene-SO06_RS03065;Name=SO06_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03065 NZ_MYDG01000001.1 Protein Homology CDS 579263 580183 . + 0 ID=cds-WP_000163977.1;Parent=gene-SO06_RS03065;Dbxref=GenBank:WP_000163977.1;Name=WP_000163977.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=SO06_RS03065;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_000163977.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 580338 581552 . + . ID=gene-SO06_RS03075;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=SO06_RS03075 NZ_MYDG01000001.1 Protein Homology CDS 580338 581552 . + 0 ID=cds-WP_000075053.1;Parent=gene-SO06_RS03075;Dbxref=GenBank:WP_000075053.1;Name=WP_000075053.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=SO06_RS03075;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000075053.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 581634 582008 . + . ID=gene-SO06_RS03080;Name=SO06_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03080 NZ_MYDG01000001.1 Protein Homology CDS 581634 582008 . + 0 ID=cds-WP_000180050.1;Parent=gene-SO06_RS03080;Dbxref=GenBank:WP_000180050.1;Name=WP_000180050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=SO06_RS03080;product=MysB family protein;protein_id=WP_000180050.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 582009 582236 . - . ID=gene-SO06_RS03085;Name=SO06_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03085 NZ_MYDG01000001.1 Protein Homology CDS 582009 582236 . - 0 ID=cds-WP_001217832.1;Parent=gene-SO06_RS03085;Dbxref=GenBank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=SO06_RS03085;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 582310 584853 . - . ID=gene-SO06_RS03090;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=SO06_RS03090 NZ_MYDG01000001.1 Protein Homology CDS 582310 584853 . - 0 ID=cds-WP_023232327.1;Parent=gene-SO06_RS03090;Dbxref=GenBank:WP_023232327.1;Name=WP_023232327.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460122.1;locus_tag=SO06_RS03090;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_023232327.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 584846 586381 . - . ID=gene-SO06_RS03095;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=SO06_RS03095 NZ_MYDG01000001.1 Protein Homology CDS 584846 586381 . - 0 ID=cds-WP_001562609.1;Parent=gene-SO06_RS03095;Dbxref=GenBank:WP_001562609.1;Name=WP_001562609.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=SO06_RS03095;product=glucans biosynthesis protein MdoG;protein_id=WP_001562609.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 586653 587807 . + . ID=gene-SO06_RS03100;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=SO06_RS03100 NZ_MYDG01000001.1 Protein Homology CDS 586653 587807 . + 0 ID=cds-WP_048348866.1;Parent=gene-SO06_RS03100;Dbxref=GenBank:WP_048348866.1;Name=WP_048348866.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=SO06_RS03100;product=glucans biosynthesis protein MdoC;protein_id=WP_048348866.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 587824 589311 . - . ID=gene-SO06_RS03105;Name=SO06_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03105 NZ_MYDG01000001.1 Protein Homology CDS 587824 589311 . - 0 ID=cds-WP_000976323.1;Parent=gene-SO06_RS03105;Dbxref=GenBank:WP_000976323.1;Name=WP_000976323.1;Ontology_term=GO:0032049,GO:0090483;gbkey=CDS;go_function=phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity|0090483||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=SO06_RS03105;product=phospholipase D family protein;protein_id=WP_000976323.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 589247 589786 . - . ID=gene-SO06_RS03110;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=SO06_RS03110 NZ_MYDG01000001.1 Protein Homology CDS 589247 589786 . - 0 ID=cds-WP_000203944.1;Parent=gene-SO06_RS03110;Dbxref=GenBank:WP_000203944.1;Name=WP_000203944.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=SO06_RS03110;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000203944.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 589872 590192 . - . ID=gene-SO06_RS03115;Name=SO06_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03115 NZ_MYDG01000001.1 Protein Homology CDS 589872 590192 . - 0 ID=cds-WP_000111254.1;Parent=gene-SO06_RS03115;Dbxref=GenBank:WP_000111254.1;Name=WP_000111254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=SO06_RS03115;product=type 1 fimbrial protein;protein_id=WP_000111254.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 590323 590649 . - . ID=gene-SO06_RS03120;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=SO06_RS03120 NZ_MYDG01000001.1 Protein Homology CDS 590323 590649 . - 0 ID=cds-WP_000557256.1;Parent=gene-SO06_RS03120;Dbxref=GenBank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=SO06_RS03120;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 590711 591166 . - . ID=gene-SO06_RS03125;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=SO06_RS03125 NZ_MYDG01000001.1 Protein Homology CDS 590711 591166 . - 0 ID=cds-WP_000771416.1;Parent=gene-SO06_RS03125;Dbxref=GenBank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=SO06_RS03125;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 591208 591663 . - . ID=gene-SO06_RS03130;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=SO06_RS03130 NZ_MYDG01000001.1 Protein Homology CDS 591208 591663 . - 0 ID=cds-WP_000791655.1;Parent=gene-SO06_RS03130;Dbxref=GenBank:WP_000791655.1;Name=WP_000791655.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=SO06_RS03130;product=curli minor subunit CsgB;protein_id=WP_000791655.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 592418 593068 . + . ID=gene-SO06_RS03140;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=SO06_RS03140 NZ_MYDG01000001.1 Protein Homology CDS 592418 593068 . + 0 ID=cds-WP_000481517.1;Parent=gene-SO06_RS03140;Dbxref=GenBank:WP_000481517.1;Name=WP_000481517.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=SO06_RS03140;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481517.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 593073 593468 . + . ID=gene-SO06_RS03145;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=SO06_RS03145 NZ_MYDG01000001.1 Protein Homology CDS 593073 593468 . + 0 ID=cds-WP_000833307.1;Parent=gene-SO06_RS03145;Dbxref=GenBank:WP_000833307.1;Name=WP_000833307.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=SO06_RS03145;product=curli production assembly/transport protein CsgE;protein_id=WP_000833307.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 593495 593911 . + . ID=gene-SO06_RS03150;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=SO06_RS03150 NZ_MYDG01000001.1 Protein Homology CDS 593495 593911 . + 0 ID=cds-WP_001264073.1;Parent=gene-SO06_RS03150;Dbxref=GenBank:WP_001264073.1;Name=WP_001264073.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=SO06_RS03150;product=curli production assembly/transport protein CsgF;protein_id=WP_001264073.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 593938 594771 . + . ID=gene-SO06_RS03155;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=SO06_RS03155 NZ_MYDG01000001.1 Protein Homology CDS 593938 594771 . + 0 ID=cds-WP_001137620.1;Parent=gene-SO06_RS03155;Dbxref=GenBank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=SO06_RS03155;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 594810 595292 . - . ID=gene-SO06_RS03160;Name=SO06_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03160 NZ_MYDG01000001.1 Protein Homology CDS 594810 595292 . - 0 ID=cds-WP_023204999.1;Parent=gene-SO06_RS03160;Dbxref=GenBank:WP_023204999.1;Name=WP_023204999.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=SO06_RS03160;product=DUF1097 domain-containing protein;protein_id=WP_023204999.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 595393 595947 . - . ID=gene-SO06_RS03165;Name=SO06_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03165 NZ_MYDG01000001.1 Protein Homology CDS 595393 595947 . - 0 ID=cds-WP_001001890.1;Parent=gene-SO06_RS03165;Dbxref=GenBank:WP_001001890.1;Name=WP_001001890.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=SO06_RS03165;product=TorD/DmsD family molecular chaperone;protein_id=WP_001001890.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 595971 596708 . - . ID=gene-SO06_RS03170;Name=SO06_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03170 NZ_MYDG01000001.1 Protein Homology CDS 595971 596708 . - 0 ID=cds-WP_000283643.1;Parent=gene-SO06_RS03170;Dbxref=GenBank:WP_000283643.1;Name=WP_000283643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=SO06_RS03170;product=phosphatase;protein_id=WP_000283643.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 596793 597731 . - . ID=gene-SO06_RS03175;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=SO06_RS03175 NZ_MYDG01000001.1 Protein Homology CDS 596793 597731 . - 0 ID=cds-WP_000402551.1;Parent=gene-SO06_RS03175;Dbxref=GenBank:WP_000402551.1;Name=WP_000402551.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=SO06_RS03175;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000402551.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 597967 598054 . + . ID=gene-SO06_RS03185;Name=SO06_RS03185;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS03185 NZ_MYDG01000001.1 tRNAscan-SE tRNA 597967 598054 . + . ID=rna-SO06_RS03185;Parent=gene-SO06_RS03185;anticodon=(pos:598001..598003);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03185;product=tRNA-Ser NZ_MYDG01000001.1 tRNAscan-SE exon 597967 598054 . + . ID=exon-SO06_RS03185-1;Parent=rna-SO06_RS03185;anticodon=(pos:598001..598003);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03185;product=tRNA-Ser NZ_MYDG01000001.1 RefSeq pseudogene 598740 598991 . + . ID=gene-SO06_RS03200;Name=SO06_RS03200;end_range=598991,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS03200;partial=true;pseudo=true NZ_MYDG01000001.1 Protein Homology CDS 598740 598991 . + 0 ID=cds-SO06_RS03200;Parent=gene-SO06_RS03200;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=598991,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=SO06_RS03200;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 599252 600070 . - . ID=gene-SO06_RS03205;Name=SO06_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03205 NZ_MYDG01000001.1 Protein Homology CDS 599252 600070 . - 0 ID=cds-WP_023231764.1;Parent=gene-SO06_RS03205;Dbxref=GenBank:WP_023231764.1;Name=WP_023231764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176774.1;locus_tag=SO06_RS03205;product=hypothetical protein;protein_id=WP_023231764.1;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 600551 600796 . - . ID=gene-SO06_RS25750;Name=SO06_RS25750;end_range=600796,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25750;partial=true;pseudo=true NZ_MYDG01000001.1 Protein Homology CDS 600551 600796 . - 0 ID=cds-SO06_RS25750;Parent=gene-SO06_RS25750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=600796,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524936.1;locus_tag=SO06_RS25750;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 601087 601176 . - . ID=gene-SO06_RS03220;Name=SO06_RS03220;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS03220 NZ_MYDG01000001.1 tRNAscan-SE tRNA 601087 601176 . - . ID=rna-SO06_RS03220;Parent=gene-SO06_RS03220;anticodon=(pos:complement(601140..601142));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03220;product=tRNA-Ser NZ_MYDG01000001.1 tRNAscan-SE exon 601087 601176 . - . ID=exon-SO06_RS03220-1;Parent=rna-SO06_RS03220;anticodon=(pos:complement(601140..601142));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03220;product=tRNA-Ser NZ_MYDG01000001.1 RefSeq gene 601265 602062 . + . ID=gene-SO06_RS03225;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=SO06_RS03225 NZ_MYDG01000001.1 Protein Homology CDS 601265 602062 . + 0 ID=cds-WP_000598920.1;Parent=gene-SO06_RS03225;Dbxref=GenBank:WP_000598920.1;Name=WP_000598920.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=SO06_RS03225;product=DgsA anti-repressor MtfA;protein_id=WP_000598920.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 602163 602238 . + . ID=gene-SO06_RS03230;Name=SO06_RS03230;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS03230 NZ_MYDG01000001.1 tRNAscan-SE tRNA 602163 602238 . + . ID=rna-SO06_RS03230;Parent=gene-SO06_RS03230;anticodon=(pos:602196..602198);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03230;product=tRNA-Asn NZ_MYDG01000001.1 tRNAscan-SE exon 602163 602238 . + . ID=exon-SO06_RS03230-1;Parent=rna-SO06_RS03230;anticodon=(pos:602196..602198);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03230;product=tRNA-Asn NZ_MYDG01000001.1 RefSeq pseudogene 602406 602711 . + . ID=gene-SO06_RS03235;Name=SO06_RS03235;end_range=602711,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS03235;partial=true;pseudo=true NZ_MYDG01000001.1 Protein Homology CDS 602406 602711 . + 0 ID=cds-SO06_RS03235;Parent=gene-SO06_RS03235;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=602711,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=SO06_RS03235;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 603133 603208 . + . ID=gene-SO06_RS03240;Name=SO06_RS03240;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS03240 NZ_MYDG01000001.1 tRNAscan-SE tRNA 603133 603208 . + . ID=rna-SO06_RS03240;Parent=gene-SO06_RS03240;anticodon=(pos:603166..603168);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03240;product=tRNA-Asn NZ_MYDG01000001.1 tRNAscan-SE exon 603133 603208 . + . ID=exon-SO06_RS03240-1;Parent=rna-SO06_RS03240;anticodon=(pos:603166..603168);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03240;product=tRNA-Asn NZ_MYDG01000001.1 RefSeq gene 603388 604662 . + . ID=gene-SO06_RS03245;Name=SO06_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03245 NZ_MYDG01000001.1 Protein Homology CDS 603388 604662 . + 0 ID=cds-WP_023231763.1;Parent=gene-SO06_RS03245;Dbxref=GenBank:WP_023231763.1;Name=WP_023231763.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=SO06_RS03245;product=tyrosine-type recombinase/integrase;protein_id=WP_023231763.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 604729 604980 . - . ID=gene-SO06_RS03250;Name=SO06_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03250 NZ_MYDG01000001.1 Protein Homology CDS 604729 604980 . - 0 ID=cds-WP_000042271.1;Parent=gene-SO06_RS03250;Dbxref=GenBank:WP_000042271.1;Name=WP_000042271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212204.1;locus_tag=SO06_RS03250;product=hypothetical protein;protein_id=WP_000042271.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 605909 607021 . + . ID=gene-SO06_RS03260;Name=SO06_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03260 NZ_MYDG01000001.1 Protein Homology CDS 605909 607021 . + 0 ID=cds-WP_023231762.1;Parent=gene-SO06_RS03260;Dbxref=GenBank:WP_023231762.1;Name=WP_023231762.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022062.6;locus_tag=SO06_RS03260;product=AIPR family protein;protein_id=WP_023231762.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 607260 608747 . - . ID=gene-SO06_RS03265;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=SO06_RS03265 NZ_MYDG01000001.1 Protein Homology CDS 607260 608747 . - 0 ID=cds-WP_024148454.1;Parent=gene-SO06_RS03265;Dbxref=GenBank:WP_024148454.1;Name=WP_024148454.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592081.1;locus_tag=SO06_RS03265;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_024148454.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 608800 609357 . - . ID=gene-SO06_RS03270;Name=bfpA;gbkey=Gene;gene=bfpA;gene_biotype=protein_coding;locus_tag=SO06_RS03270 NZ_MYDG01000001.1 Protein Homology CDS 608800 609357 . - 0 ID=cds-WP_023231760.1;Parent=gene-SO06_RS03270;Dbxref=GenBank:WP_023231760.1;Name=WP_023231760.1;gbkey=CDS;gene=bfpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243508.1;locus_tag=SO06_RS03270;product=type IV pilus major subunit protein BfpA;protein_id=WP_023231760.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 609764 610069 . - . ID=gene-SO06_RS03275;Name=SO06_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03275 NZ_MYDG01000001.1 Protein Homology CDS 609764 610069 . - 0 ID=cds-WP_023231759.1;Parent=gene-SO06_RS03275;Dbxref=GenBank:WP_023231759.1;Name=WP_023231759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368354.1;locus_tag=SO06_RS03275;product=conjugal transfer protein TraD;protein_id=WP_023231759.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 610729 612243 . + . ID=gene-SO06_RS03280;Name=mobQ;gbkey=Gene;gene=mobQ;gene_biotype=protein_coding;locus_tag=SO06_RS03280 NZ_MYDG01000001.1 Protein Homology CDS 610729 612243 . + 0 ID=cds-WP_024148453.1;Parent=gene-SO06_RS03280;Dbxref=GenBank:WP_024148453.1;Name=WP_024148453.1;gbkey=CDS;gene=mobQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000964083.1;locus_tag=SO06_RS03280;product=MobQ family relaxase;protein_id=WP_024148453.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 612364 613098 . + . ID=gene-SO06_RS03285;Name=SO06_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03285 NZ_MYDG01000001.1 Protein Homology CDS 612364 613098 . + 0 ID=cds-WP_052895215.1;Parent=gene-SO06_RS03285;Dbxref=GenBank:WP_052895215.1;Name=WP_052895215.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022354.6;locus_tag=SO06_RS03285;product=abortive infection system antitoxin AbiGi family protein;protein_id=WP_052895215.1;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 613143 613263 . - . ID=gene-SO06_RS25425;Name=SO06_RS25425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25425;partial=true;pseudo=true;start_range=.,613143 NZ_MYDG01000001.1 Protein Homology CDS 613143 613263 . - 0 ID=cds-SO06_RS25425;Parent=gene-SO06_RS25425;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146066.1;locus_tag=SO06_RS25425;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,613143;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 613457 614032 . - . ID=gene-SO06_RS03290;Name=SO06_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03290 NZ_MYDG01000001.1 Protein Homology CDS 613457 614032 . - 0 ID=cds-WP_023231756.1;Parent=gene-SO06_RS03290;Dbxref=GenBank:WP_023231756.1;Name=WP_023231756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008101572.1;locus_tag=SO06_RS03290;product=hypothetical protein;protein_id=WP_023231756.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 614436 614966 . - . ID=gene-SO06_RS03300;Name=SO06_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03300 NZ_MYDG01000001.1 Protein Homology CDS 614436 614966 . - 0 ID=cds-WP_023231755.1;Parent=gene-SO06_RS03300;Dbxref=GenBank:WP_023231755.1;Name=WP_023231755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608353.1;locus_tag=SO06_RS03300;product=hypothetical protein;protein_id=WP_023231755.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 615256 615597 . + . ID=gene-SO06_RS03305;Name=SO06_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03305 NZ_MYDG01000001.1 Protein Homology CDS 615256 615597 . + 0 ID=cds-WP_071786839.1;Parent=gene-SO06_RS03305;Dbxref=GenBank:WP_071786839.1;Name=WP_071786839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402162.1;locus_tag=SO06_RS03305;product=hypothetical protein;protein_id=WP_071786839.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 615714 616184 . + . ID=gene-SO06_RS03310;Name=SO06_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03310 NZ_MYDG01000001.1 Protein Homology CDS 615714 616184 . + 0 ID=cds-WP_023231754.1;Parent=gene-SO06_RS03310;Dbxref=GenBank:WP_023231754.1;Name=WP_023231754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014601.1;locus_tag=SO06_RS03310;product=hypothetical protein;protein_id=WP_023231754.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 616345 616896 . + . ID=gene-SO06_RS03315;Name=SO06_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03315 NZ_MYDG01000001.1 GeneMarkS-2+ CDS 616345 616896 . + 0 ID=cds-WP_023231753.1;Parent=gene-SO06_RS03315;Dbxref=GenBank:WP_023231753.1;Name=WP_023231753.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS03315;product=hypothetical protein;protein_id=WP_023231753.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 617607 618857 . - . ID=gene-SO06_RS03325;Name=SO06_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03325 NZ_MYDG01000001.1 Protein Homology CDS 617607 618857 . - 0 ID=cds-WP_080204159.1;Parent=gene-SO06_RS03325;Dbxref=GenBank:WP_080204159.1;Name=WP_080204159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843923.1;locus_tag=SO06_RS03325;product=hypothetical protein;protein_id=WP_080204159.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 619215 619652 . - . ID=gene-SO06_RS25240;Name=SO06_RS25240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25240 NZ_MYDG01000001.1 GeneMarkS-2+ CDS 619215 619652 . - 0 ID=cds-WP_023231750.1;Parent=gene-SO06_RS25240;Dbxref=GenBank:WP_023231750.1;Name=WP_023231750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS25240;product=hypothetical protein;protein_id=WP_023231750.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 619798 620355 . - . ID=gene-SO06_RS24925;Name=SO06_RS24925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24925 NZ_MYDG01000001.1 GeneMarkS-2+ CDS 619798 620355 . - 0 ID=cds-WP_094204684.1;Parent=gene-SO06_RS24925;Dbxref=GenBank:WP_094204684.1;Name=WP_094204684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS24925;product=hypothetical protein;protein_id=WP_094204684.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 621298 622026 . - . ID=gene-SO06_RS03345;Name=SO06_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03345 NZ_MYDG01000001.1 Protein Homology CDS 621298 622026 . - 0 ID=cds-WP_023231747.1;Parent=gene-SO06_RS03345;Dbxref=GenBank:WP_023231747.1;Name=WP_023231747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001773963.1;locus_tag=SO06_RS03345;product=hypothetical protein;protein_id=WP_023231747.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 622554 625283 . - . ID=gene-SO06_RS03350;Name=SO06_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03350 NZ_MYDG01000001.1 Protein Homology CDS 622554 625283 . - 0 ID=cds-WP_223174525.1;Parent=gene-SO06_RS03350;Dbxref=GenBank:WP_223174525.1;Name=WP_223174525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607564.1;locus_tag=SO06_RS03350;product=DotA/TraY family protein;protein_id=WP_223174525.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 625391 625894 . - . ID=gene-SO06_RS03355;Name=SO06_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03355 NZ_MYDG01000001.1 Protein Homology CDS 625391 625894 . - 0 ID=cds-WP_023231746.1;Parent=gene-SO06_RS03355;Dbxref=GenBank:WP_023231746.1;Name=WP_023231746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607566.1;locus_tag=SO06_RS03355;product=hypothetical protein;protein_id=WP_023231746.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 626240 627109 . + . ID=gene-SO06_RS03360;Name=SO06_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03360 NZ_MYDG01000001.1 Protein Homology CDS 626240 627109 . + 0 ID=cds-WP_023231745.1;Parent=gene-SO06_RS03360;Dbxref=GenBank:WP_023231745.1;Name=WP_023231745.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607568.1;locus_tag=SO06_RS03360;product=restriction endonuclease;protein_id=WP_023231745.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 627277 627864 . - . ID=gene-SO06_RS03365;Name=SO06_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03365 NZ_MYDG01000001.1 Protein Homology CDS 627277 627864 . - 0 ID=cds-WP_023231744.1;Parent=gene-SO06_RS03365;Dbxref=GenBank:WP_023231744.1;Name=WP_023231744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764626.1;locus_tag=SO06_RS03365;product=hypothetical protein;protein_id=WP_023231744.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 628243 629226 . - . ID=gene-SO06_RS03370;Name=SO06_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03370 NZ_MYDG01000001.1 Protein Homology CDS 628243 629226 . - 0 ID=cds-WP_023231743.1;Parent=gene-SO06_RS03370;Dbxref=GenBank:WP_023231743.1;Name=WP_023231743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764627.1;locus_tag=SO06_RS03370;product=hypothetical protein;protein_id=WP_023231743.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 629262 629705 . - . ID=gene-SO06_RS03375;Name=SO06_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03375 NZ_MYDG01000001.1 Protein Homology CDS 629262 629705 . - 0 ID=cds-WP_023231742.1;Parent=gene-SO06_RS03375;Dbxref=GenBank:WP_023231742.1;Name=WP_023231742.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248465.1;locus_tag=SO06_RS03375;product=NUDIX hydrolase;protein_id=WP_023231742.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 629745 630263 . - . ID=gene-SO06_RS03380;Name=SO06_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03380 NZ_MYDG01000001.1 Protein Homology CDS 629745 630263 . - 0 ID=cds-WP_023231741.1;Parent=gene-SO06_RS03380;Dbxref=GenBank:WP_023231741.1;Name=WP_023231741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000115885.1;locus_tag=SO06_RS03380;product=ClbS/DfsB family four-helix bundle protein;protein_id=WP_023231741.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 630548 630808 . - . ID=gene-SO06_RS03385;Name=SO06_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03385 NZ_MYDG01000001.1 Protein Homology CDS 630548 630808 . - 0 ID=cds-WP_023231740.1;Parent=gene-SO06_RS03385;Dbxref=GenBank:WP_023231740.1;Name=WP_023231740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059618.1;locus_tag=SO06_RS03385;product=hypothetical protein;protein_id=WP_023231740.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 632163 632897 . + . ID=gene-SO06_RS03390;Name=SO06_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03390 NZ_MYDG01000001.1 Protein Homology CDS 632163 632897 . + 0 ID=cds-WP_023231739.1;Parent=gene-SO06_RS03390;Dbxref=GenBank:WP_023231739.1;Name=WP_023231739.1;Ontology_term=GO:0006260,GO:0006276;gbkey=CDS;go_process=DNA replication|0006260||IEA,plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004860215.1;locus_tag=SO06_RS03390;product=replication/maintenance protein RepL;protein_id=WP_023231739.1;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 632928 633718 . + . ID=gene-SO06_RS03395;Name=SO06_RS03395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS03395;pseudo=true NZ_MYDG01000001.1 Protein Homology CDS 632928 633718 . + 0 ID=cds-SO06_RS03395;Parent=gene-SO06_RS03395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735917.1;locus_tag=SO06_RS03395;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 633804 634283 . + . ID=gene-SO06_RS03400;Name=SO06_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03400 NZ_MYDG01000001.1 Protein Homology CDS 633804 634283 . + 0 ID=cds-WP_001233371.1;Parent=gene-SO06_RS03400;Dbxref=GenBank:WP_001233371.1;Name=WP_001233371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233373.1;locus_tag=SO06_RS03400;product=DUF4756 family protein;protein_id=WP_001233371.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 634444 634848 . + . ID=gene-SO06_RS03405;Name=SO06_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03405 NZ_MYDG01000001.1 Protein Homology CDS 634444 634848 . + 0 ID=cds-WP_001287371.1;Parent=gene-SO06_RS03405;Dbxref=GenBank:WP_001287371.1;Name=WP_001287371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519859.1;locus_tag=SO06_RS03405;product=H-NS family histone-like protein;protein_id=WP_001287371.1;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 634896 635172 . + . ID=gene-SO06_RS25430;Name=SO06_RS25430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25430;partial=true;pseudo=true;start_range=.,634896 NZ_MYDG01000001.1 Protein Homology CDS 634896 635172 . + 0 ID=cds-SO06_RS25430;Parent=gene-SO06_RS25430;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=SO06_RS25430;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,634896;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 635260 635825 . - . ID=gene-SO06_RS03410;Name=SO06_RS03410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS03410;pseudo=true NZ_MYDG01000001.1 Protein Homology CDS 635260 635825 . - 0 ID=cds-SO06_RS03410;Parent=gene-SO06_RS03410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037287.6;locus_tag=SO06_RS03410;product=SLATT domain-containing protein;pseudo=true;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 635872 637143 . - . ID=gene-SO06_RS03415;Name=SO06_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03415 NZ_MYDG01000001.1 Protein Homology CDS 635872 637143 . - 0 ID=cds-WP_000102010.1;Parent=gene-SO06_RS03415;Dbxref=GenBank:WP_000102010.1;Name=WP_000102010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102011.1;locus_tag=SO06_RS03415;product=SMODS domain-containing nucleotidyltransferase;protein_id=WP_000102010.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 637389 637685 . - . ID=gene-SO06_RS03420;Name=SO06_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03420 NZ_MYDG01000001.1 Protein Homology CDS 637389 637685 . - 0 ID=cds-WP_023231737.1;Parent=gene-SO06_RS03420;Dbxref=GenBank:WP_023231737.1;Name=WP_023231737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091325.1;locus_tag=SO06_RS03420;product=hypothetical protein;protein_id=WP_023231737.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 637738 638028 . - . ID=gene-SO06_RS03425;Name=SO06_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03425 NZ_MYDG01000001.1 Protein Homology CDS 637738 638028 . - 0 ID=cds-WP_024148450.1;Parent=gene-SO06_RS03425;Dbxref=GenBank:WP_024148450.1;Name=WP_024148450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524933.1;locus_tag=SO06_RS03425;product=hypothetical protein;protein_id=WP_024148450.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 638109 638327 . - . ID=gene-SO06_RS03430;Name=SO06_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03430 NZ_MYDG01000001.1 Protein Homology CDS 638109 638327 . - 0 ID=cds-WP_000240779.1;Parent=gene-SO06_RS03430;Dbxref=GenBank:WP_000240779.1;Name=WP_000240779.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240778.1;locus_tag=SO06_RS03430;product=helix-turn-helix transcriptional regulator;protein_id=WP_000240779.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 638478 639353 . - . ID=gene-SO06_RS03435;Name=SO06_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03435 NZ_MYDG01000001.1 Protein Homology CDS 638478 639353 . - 0 ID=cds-WP_000166882.1;Parent=gene-SO06_RS03435;Dbxref=GenBank:WP_000166882.1;Name=WP_000166882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166882.1;locus_tag=SO06_RS03435;product=DUF6387 family protein;protein_id=WP_000166882.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 639896 640420 . + . ID=gene-SO06_RS03445;Name=SO06_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03445 NZ_MYDG01000001.1 Protein Homology CDS 639896 640420 . + 0 ID=cds-WP_001219023.1;Parent=gene-SO06_RS03445;Dbxref=GenBank:WP_001219023.1;Name=WP_001219023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=SO06_RS03445;product=peptidase;protein_id=WP_001219023.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 640895 641767 . + . ID=gene-SO06_RS03460;Name=SO06_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03460 NZ_MYDG01000001.1 Protein Homology CDS 640895 641767 . + 0 ID=cds-WP_023231734.1;Parent=gene-SO06_RS03460;Dbxref=GenBank:WP_023231734.1;Name=WP_023231734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=SO06_RS03460;product=integrase domain-containing protein;protein_id=WP_023231734.1;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 641791 642069 . + . ID=gene-SO06_RS03465;Name=SO06_RS03465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS03465;partial=true;pseudo=true;start_range=.,641791 NZ_MYDG01000001.1 Protein Homology CDS 641791 642069 . + 0 ID=cds-SO06_RS03465;Parent=gene-SO06_RS03465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=SO06_RS03465;partial=true;product=transposase;pseudo=true;start_range=.,641791;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 642753 644447 . + . ID=gene-SO06_RS03470;Name=SO06_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03470 NZ_MYDG01000001.1 Protein Homology CDS 642753 644447 . + 0 ID=cds-WP_077248385.1;Parent=gene-SO06_RS03470;Dbxref=GenBank:WP_077248385.1;Name=WP_077248385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=SO06_RS03470;product=SEL1-like repeat protein;protein_id=WP_077248385.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 644504 646234 . + . ID=gene-SO06_RS03475;Name=SO06_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03475 NZ_MYDG01000001.1 Protein Homology CDS 644504 646234 . + 0 ID=cds-WP_023231732.1;Parent=gene-SO06_RS03475;Dbxref=GenBank:WP_023231732.1;Name=WP_023231732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=SO06_RS03475;product=hypothetical protein;protein_id=WP_023231732.1;transl_table=11 NZ_MYDG01000001.1 RefSeq pseudogene 646292 646396 . - . ID=gene-SO06_RS03480;Name=SO06_RS03480;end_range=646396,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS03480;partial=true;pseudo=true NZ_MYDG01000001.1 Protein Homology CDS 646292 646396 . - 0 ID=cds-SO06_RS03480;Parent=gene-SO06_RS03480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=646396,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=SO06_RS03480;partial=true;product=DUF520 family protein;pseudo=true;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 646444 646617 . + . ID=gene-SO06_RS25245;Name=SO06_RS25245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25245 NZ_MYDG01000001.1 Protein Homology CDS 646444 646617 . + 0 ID=cds-WP_000957535.1;Parent=gene-SO06_RS25245;Dbxref=GenBank:WP_000957535.1;Name=WP_000957535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957538.1;locus_tag=SO06_RS25245;product=hypothetical protein;protein_id=WP_000957535.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 647124 648578 . - . ID=gene-SO06_RS03490;Name=SO06_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03490 NZ_MYDG01000001.1 Protein Homology CDS 647124 648578 . - 0 ID=cds-WP_017441829.1;Parent=gene-SO06_RS03490;Dbxref=GenBank:WP_017441829.1;Name=WP_017441829.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=SO06_RS03490;product=AMP nucleosidase;protein_id=WP_017441829.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 648624 648785 . + . ID=gene-SO06_RS03495;Name=SO06_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03495 NZ_MYDG01000001.1 Protein Homology CDS 648624 648785 . + 0 ID=cds-WP_031602446.1;Parent=gene-SO06_RS03495;Dbxref=GenBank:WP_031602446.1;Name=WP_031602446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=SO06_RS03495;product=hypothetical protein;protein_id=WP_031602446.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 648774 649100 . - . ID=gene-SO06_RS03500;Name=SO06_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03500 NZ_MYDG01000001.1 Protein Homology CDS 648774 649100 . - 0 ID=cds-WP_000228159.1;Parent=gene-SO06_RS03500;Dbxref=GenBank:WP_000228159.1;Name=WP_000228159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=SO06_RS03500;product=DUF1493 family protein;protein_id=WP_000228159.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 649094 649558 . - . ID=gene-SO06_RS03505;Name=SO06_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03505 NZ_MYDG01000001.1 Protein Homology CDS 649094 649558 . - 0 ID=cds-WP_000381834.1;Parent=gene-SO06_RS03505;Dbxref=GenBank:WP_000381834.1;Name=WP_000381834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=SO06_RS03505;product=STM2901 family protein;protein_id=WP_000381834.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 649979 650054 . - . ID=gene-SO06_RS03510;Name=SO06_RS03510;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS03510 NZ_MYDG01000001.1 tRNAscan-SE tRNA 649979 650054 . - . ID=rna-SO06_RS03510;Parent=gene-SO06_RS03510;anticodon=(pos:complement(650019..650021));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03510;product=tRNA-Asn NZ_MYDG01000001.1 tRNAscan-SE exon 649979 650054 . - . ID=exon-SO06_RS03510-1;Parent=rna-SO06_RS03510;anticodon=(pos:complement(650019..650021));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03510;product=tRNA-Asn NZ_MYDG01000001.1 RefSeq gene 650195 651652 . - . ID=gene-SO06_RS03515;Name=SO06_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03515 NZ_MYDG01000001.1 Protein Homology CDS 650195 651652 . - 0 ID=cds-WP_023231731.1;Parent=gene-SO06_RS03515;Dbxref=GenBank:WP_023231731.1;Name=WP_023231731.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=SO06_RS03515;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_023231731.1;transl_table=11 NZ_MYDG01000001.1 RefSeq gene 651812 651887 . + . ID=gene-SO06_RS03520;Name=SO06_RS03520;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS03520 NZ_MYDG01000001.1 tRNAscan-SE tRNA 651812 651887 . + . ID=rna-SO06_RS03520;Parent=gene-SO06_RS03520;anticodon=(pos:651845..651847);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03520;product=tRNA-Asn NZ_MYDG01000001.1 tRNAscan-SE exon 651812 651887 . + . ID=exon-SO06_RS03520-1;Parent=rna-SO06_RS03520;anticodon=(pos:651845..651847);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03520;product=tRNA-Asn ##sequence-region NZ_MYDG01000020.1 1 74521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000020.1 RefSeq region 1 74521 . + . ID=NZ_MYDG01000020.1:1..74521;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000020.1 RefSeq pseudogene 1 67 . - . ID=gene-SO06_RS19660;Name=SO06_RS19660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS19660;partial=true;pseudo=true;start_range=.,1 NZ_MYDG01000020.1 Protein Homology CDS 1 67 . - 0 ID=cds-SO06_RS19660;Parent=gene-SO06_RS19660;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=SO06_RS19660;partial=true;product=cytochrome c biogenesis heme-transporting ATPase CcmA;pseudo=true;start_range=.,1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 88 690 . - . ID=gene-SO06_RS19665;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=SO06_RS19665 NZ_MYDG01000020.1 Protein Homology CDS 88 690 . - 0 ID=cds-WP_080204275.1;Parent=gene-SO06_RS19665;Dbxref=GenBank:WP_080204275.1;Name=WP_080204275.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=SO06_RS19665;product=cytochrome c-type protein NapC;protein_id=WP_080204275.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 700 1149 . - . ID=gene-SO06_RS19670;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=SO06_RS19670 NZ_MYDG01000020.1 Protein Homology CDS 700 1149 . - 0 ID=cds-WP_000835182.1;Parent=gene-SO06_RS19670;Dbxref=GenBank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=SO06_RS19670;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 1265 2134 . - . ID=gene-SO06_RS19675;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=SO06_RS19675 NZ_MYDG01000020.1 Protein Homology CDS 1265 2134 . - 0 ID=cds-WP_000013528.1;Parent=gene-SO06_RS19675;Dbxref=GenBank:WP_000013528.1;Name=WP_000013528.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=SO06_RS19675;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013528.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 2121 2816 . - . ID=gene-SO06_RS19680;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=SO06_RS19680 NZ_MYDG01000020.1 Protein Homology CDS 2121 2816 . - 0 ID=cds-WP_000091679.1;Parent=gene-SO06_RS19680;Dbxref=GenBank:WP_000091679.1;Name=WP_000091679.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=SO06_RS19680;product=ferredoxin-type protein NapG;protein_id=WP_000091679.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 2823 5309 . - . ID=gene-SO06_RS19685;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=SO06_RS19685 NZ_MYDG01000020.1 Protein Homology CDS 2823 5309 . - 0 ID=cds-WP_000778097.1;Parent=gene-SO06_RS19685;Dbxref=GenBank:WP_000778097.1;Name=WP_000778097.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=SO06_RS19685;product=nitrate reductase catalytic subunit NapA;protein_id=WP_000778097.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 5306 5569 . - . ID=gene-SO06_RS19690;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=SO06_RS19690 NZ_MYDG01000020.1 Protein Homology CDS 5306 5569 . - 0 ID=cds-WP_001260058.1;Parent=gene-SO06_RS19690;Dbxref=GenBank:WP_001260058.1;Name=WP_001260058.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=SO06_RS19690;product=chaperone NapD;protein_id=WP_001260058.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 5559 6050 . - . ID=gene-SO06_RS19695;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=SO06_RS19695 NZ_MYDG01000020.1 Protein Homology CDS 5559 6050 . - 0 ID=cds-WP_000228069.1;Parent=gene-SO06_RS19695;Dbxref=GenBank:WP_000228069.1;Name=WP_000228069.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=SO06_RS19695;product=ferredoxin-type protein NapF;protein_id=WP_000228069.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 6464 6958 . + . ID=gene-SO06_RS19700;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=SO06_RS19700 NZ_MYDG01000020.1 Protein Homology CDS 6464 6958 . + 0 ID=cds-WP_023232548.1;Parent=gene-SO06_RS19700;Dbxref=GenBank:WP_023232548.1;Name=WP_023232548.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=SO06_RS19700;product=serine protease inhibitor ecotin;protein_id=WP_023232548.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 7167 8810 . - . ID=gene-SO06_RS19705;Name=SO06_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19705 NZ_MYDG01000020.1 Protein Homology CDS 7167 8810 . - 0 ID=cds-WP_000421589.1;Parent=gene-SO06_RS19705;Dbxref=GenBank:WP_000421589.1;Name=WP_000421589.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=SO06_RS19705;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_000421589.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 8886 9536 . - . ID=gene-SO06_RS19710;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=SO06_RS19710 NZ_MYDG01000020.1 Protein Homology CDS 8886 9536 . - 0 ID=cds-WP_023232547.1;Parent=gene-SO06_RS19710;Dbxref=GenBank:WP_023232547.1;Name=WP_023232547.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=SO06_RS19710;product=DNA oxidative demethylase AlkB;protein_id=WP_023232547.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 9539 10600 . - . ID=gene-SO06_RS19715;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=SO06_RS19715 NZ_MYDG01000020.1 Protein Homology CDS 9539 10600 . - 0 ID=cds-WP_080204276.1;Parent=gene-SO06_RS19715;Dbxref=GenBank:WP_080204276.1;Name=WP_080204276.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=SO06_RS19715;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_080204276.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 10681 11733 . - . ID=gene-SO06_RS19720;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=SO06_RS19720 NZ_MYDG01000020.1 Protein Homology CDS 10681 11733 . - 0 ID=cds-WP_000784307.1;Parent=gene-SO06_RS19720;Dbxref=GenBank:WP_000784307.1;Name=WP_000784307.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=SO06_RS19720;product=FAD:protein FMN transferase ApbE;protein_id=WP_000784307.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 11848 12984 . - . ID=gene-SO06_RS19725;Name=SO06_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19725 NZ_MYDG01000020.1 Protein Homology CDS 11848 12984 . - 0 ID=cds-WP_000865526.1;Parent=gene-SO06_RS19725;Dbxref=GenBank:WP_000865526.1;Name=WP_000865526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=SO06_RS19725;product=porin OmpC;protein_id=WP_000865526.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 13713 16382 . + . ID=gene-SO06_RS19735;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=SO06_RS19735 NZ_MYDG01000020.1 Protein Homology CDS 13713 16382 . + 0 ID=cds-WP_023232546.1;Parent=gene-SO06_RS19735;Dbxref=GenBank:WP_023232546.1;Name=WP_023232546.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=SO06_RS19735;product=phosphotransferase RcsD;protein_id=WP_023232546.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 16399 17049 . + . ID=gene-SO06_RS19740;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=SO06_RS19740 NZ_MYDG01000020.1 Protein Homology CDS 16399 17049 . + 0 ID=cds-WP_001061919.1;Parent=gene-SO06_RS19740;Dbxref=GenBank:WP_001061919.1;Name=WP_001061919.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=SO06_RS19740;product=response regulator transcription factor RcsB;protein_id=WP_001061919.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 17152 19998 . - . ID=gene-SO06_RS19745;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=SO06_RS19745 NZ_MYDG01000020.1 Protein Homology CDS 17152 19998 . - 0 ID=cds-WP_000876084.1;Parent=gene-SO06_RS19745;Dbxref=GenBank:WP_000876084.1;Name=WP_000876084.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=SO06_RS19745;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876084.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 20116 22752 . - . ID=gene-SO06_RS19750;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=SO06_RS19750 NZ_MYDG01000020.1 Protein Homology CDS 20116 22752 . - 0 ID=cds-WP_001281271.1;Parent=gene-SO06_RS19750;Dbxref=GenBank:WP_001281271.1;Name=WP_001281271.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=SO06_RS19750;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281271.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 23162 24364 . - . ID=gene-SO06_RS19760;Name=SO06_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19760 NZ_MYDG01000020.1 Protein Homology CDS 23162 24364 . - 0 ID=cds-WP_000705581.1;Parent=gene-SO06_RS19760;Dbxref=GenBank:WP_000705581.1;Name=WP_000705581.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=SO06_RS19760;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000705581.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 24379 25704 . - . ID=gene-SO06_RS19765;Name=SO06_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19765 NZ_MYDG01000020.1 Protein Homology CDS 24379 25704 . - 0 ID=cds-WP_000098078.1;Parent=gene-SO06_RS19765;Dbxref=GenBank:WP_000098078.1;Name=WP_000098078.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=SO06_RS19765;product=MFS transporter;protein_id=WP_000098078.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 25754 26638 . + . ID=gene-SO06_RS19770;Name=SO06_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19770 NZ_MYDG01000020.1 Protein Homology CDS 25754 26638 . + 0 ID=cds-WP_000944714.1;Parent=gene-SO06_RS19770;Dbxref=GenBank:WP_000944714.1;Name=WP_000944714.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=SO06_RS19770;product=GntR family transcriptional regulator;protein_id=WP_000944714.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 26721 27449 . + . ID=gene-SO06_RS19775;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=SO06_RS19775 NZ_MYDG01000020.1 Protein Homology CDS 26721 27449 . + 0 ID=cds-WP_001091009.1;Parent=gene-SO06_RS19775;Dbxref=GenBank:WP_001091009.1;Name=WP_001091009.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=SO06_RS19775;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001091009.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 27805 30090 . + . ID=gene-SO06_RS19780;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=SO06_RS19780 NZ_MYDG01000020.1 Protein Homology CDS 27805 30090 . + 0 ID=cds-WP_001076494.1;Parent=gene-SO06_RS19780;Dbxref=GenBank:WP_001076494.1;Name=WP_001076494.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=SO06_RS19780;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001076494.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 30203 31333 . + . ID=gene-SO06_RS19785;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=SO06_RS19785 NZ_MYDG01000020.1 Protein Homology CDS 30203 31333 . + 0 ID=cds-WP_000332026.1;Parent=gene-SO06_RS19785;Dbxref=GenBank:WP_000332026.1;Name=WP_000332026.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=SO06_RS19785;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332026.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 31333 31587 . + . ID=gene-SO06_RS19790;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=SO06_RS19790 NZ_MYDG01000020.1 Protein Homology CDS 31333 31587 . + 0 ID=cds-WP_000533921.1;Parent=gene-SO06_RS19790;Dbxref=GenBank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=SO06_RS19790;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 31589 32779 . - . ID=gene-SO06_RS19795;Name=SO06_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19795 NZ_MYDG01000020.1 Protein Homology CDS 31589 32779 . - 0 ID=cds-WP_000660247.1;Parent=gene-SO06_RS19795;Dbxref=GenBank:WP_000660247.1;Name=WP_000660247.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=SO06_RS19795;product=MFS transporter;protein_id=WP_000660247.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 32941 33819 . + . ID=gene-SO06_RS19800;Name=SO06_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19800 NZ_MYDG01000020.1 Protein Homology CDS 32941 33819 . + 0 ID=cds-WP_000176719.1;Parent=gene-SO06_RS19800;Dbxref=GenBank:WP_000176719.1;Name=WP_000176719.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=SO06_RS19800;product=LysR family transcriptional regulator;protein_id=WP_000176719.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 33935 35005 . - . ID=gene-SO06_RS19805;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=SO06_RS19805 NZ_MYDG01000020.1 Protein Homology CDS 33935 35005 . - 0 ID=cds-WP_000858952.1;Parent=gene-SO06_RS19805;Dbxref=GenBank:WP_000858952.1;Name=WP_000858952.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=SO06_RS19805;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000858952.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 35010 36368 . - . ID=gene-SO06_RS19810;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=SO06_RS19810 NZ_MYDG01000020.1 Protein Homology CDS 35010 36368 . - 0 ID=cds-WP_000948739.1;Parent=gene-SO06_RS19810;Dbxref=GenBank:WP_000948739.1;Name=WP_000948739.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=SO06_RS19810;product=glycerol-3-phosphate transporter;protein_id=WP_000948739.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 36641 38269 . + . ID=gene-SO06_RS19815;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=SO06_RS19815 NZ_MYDG01000020.1 Protein Homology CDS 36641 38269 . + 0 ID=cds-WP_000857207.1;Parent=gene-SO06_RS19815;Dbxref=GenBank:WP_000857207.1;Name=WP_000857207.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=SO06_RS19815;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857207.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 38259 39518 . + . ID=gene-SO06_RS19820;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=SO06_RS19820 NZ_MYDG01000020.1 Protein Homology CDS 38259 39518 . + 0 ID=cds-WP_000667152.1;Parent=gene-SO06_RS19820;Dbxref=GenBank:WP_000667152.1;Name=WP_000667152.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=SO06_RS19820;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667152.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 39515 40705 . + . ID=gene-SO06_RS19825;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=SO06_RS19825 NZ_MYDG01000020.1 Protein Homology CDS 39515 40705 . + 0 ID=cds-WP_048348907.1;Parent=gene-SO06_RS19825;Dbxref=GenBank:WP_048348907.1;Name=WP_048348907.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=SO06_RS19825;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_048348907.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 41131 42153 . + . ID=gene-SO06_RS19835;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=SO06_RS19835 NZ_MYDG01000020.1 Protein Homology CDS 41131 42153 . + 0 ID=cds-WP_023232115.1;Parent=gene-SO06_RS19835;Dbxref=GenBank:WP_023232115.1;Name=WP_023232115.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=SO06_RS19835;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WP_023232115.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 42387 42563 . - . ID=gene-SO06_RS19840;Name=SO06_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19840 NZ_MYDG01000020.1 Protein Homology CDS 42387 42563 . - 0 ID=cds-WP_001112766.1;Parent=gene-SO06_RS19840;Dbxref=GenBank:WP_001112766.1;Name=WP_001112766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=SO06_RS19840;product=hypothetical protein;protein_id=WP_001112766.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 42569 43372 . - . ID=gene-SO06_RS19845;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=SO06_RS19845 NZ_MYDG01000020.1 Protein Homology CDS 42569 43372 . - 0 ID=cds-WP_000992941.1;Parent=gene-SO06_RS19845;Dbxref=GenBank:WP_000992941.1;Name=WP_000992941.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=SO06_RS19845;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992941.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 43398 44687 . - . ID=gene-SO06_RS19850;Name=SO06_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19850 NZ_MYDG01000020.1 Protein Homology CDS 43398 44687 . - 0 ID=cds-WP_000028931.1;Parent=gene-SO06_RS19850;Dbxref=GenBank:WP_000028931.1;Name=WP_000028931.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=SO06_RS19850;product=MFS transporter;protein_id=WP_000028931.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 44743 45948 . - . ID=gene-SO06_RS19855;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=SO06_RS19855 NZ_MYDG01000020.1 Protein Homology CDS 44743 45948 . - 0 ID=cds-WP_001530644.1;Parent=gene-SO06_RS19855;Dbxref=GenBank:WP_001530644.1;Name=WP_001530644.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=SO06_RS19855;product=L-rhamnonate dehydratase;protein_id=WP_001530644.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 45962 46744 . - . ID=gene-SO06_RS19860;Name=SO06_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19860 NZ_MYDG01000020.1 Protein Homology CDS 45962 46744 . - 0 ID=cds-WP_021000541.1;Parent=gene-SO06_RS19860;Dbxref=GenBank:WP_021000541.1;Name=WP_021000541.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=SO06_RS19860;product=IclR family transcriptional regulator;protein_id=WP_021000541.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 46994 48190 . - . ID=gene-SO06_RS19865;Name=SO06_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19865 NZ_MYDG01000020.1 Protein Homology CDS 46994 48190 . - 0 ID=cds-WP_023232116.1;Parent=gene-SO06_RS19865;Dbxref=GenBank:WP_023232116.1;Name=WP_023232116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=SO06_RS19865;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_023232116.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 48305 48847 . - . ID=gene-SO06_RS19870;Name=SO06_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19870 NZ_MYDG01000020.1 Protein Homology CDS 48305 48847 . - 0 ID=cds-WP_001670658.1;Parent=gene-SO06_RS19870;Dbxref=GenBank:WP_001670658.1;Name=WP_001670658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=SO06_RS19870;product=YfaZ family protein;protein_id=WP_001670658.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 49126 49551 . + . ID=gene-SO06_RS19875;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=SO06_RS19875 NZ_MYDG01000020.1 Protein Homology CDS 49126 49551 . + 0 ID=cds-WP_001249902.1;Parent=gene-SO06_RS19875;Dbxref=GenBank:WP_001249902.1;Name=WP_001249902.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=SO06_RS19875;product=nucleoside triphosphatase NudI;protein_id=WP_001249902.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 49596 50201 . - . ID=gene-SO06_RS19880;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=SO06_RS19880 NZ_MYDG01000020.1 Protein Homology CDS 49596 50201 . - 0 ID=cds-WP_000879258.1;Parent=gene-SO06_RS19880;Dbxref=GenBank:WP_000879258.1;Name=WP_000879258.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=SO06_RS19880;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879258.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 50500 51639 . + . ID=gene-SO06_RS19885;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=SO06_RS19885 NZ_MYDG01000020.1 Protein Homology CDS 50500 51639 . + 0 ID=cds-WP_001279284.1;Parent=gene-SO06_RS19885;Dbxref=GenBank:WP_001279284.1;Name=WP_001279284.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=SO06_RS19885;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001279284.1;transl_table=11 NZ_MYDG01000020.1 RefSeq pseudogene 51642 52626 . + . ID=gene-SO06_RS19890;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=pseudogene;locus_tag=SO06_RS19890;pseudo=true NZ_MYDG01000020.1 Protein Homology CDS 51642 52626 . + 0 ID=cds-SO06_RS19890;Parent=gene-SO06_RS19890;Note=frameshifted;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=SO06_RS19890;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;pseudo=true;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 52623 54605 . + . ID=gene-SO06_RS19895;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=SO06_RS19895 NZ_MYDG01000020.1 Protein Homology CDS 52623 54605 . + 0 ID=cds-WP_000648764.1;Parent=gene-SO06_RS19895;Dbxref=GenBank:WP_000648764.1;Name=WP_000648764.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=SO06_RS19895;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_000648764.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 54602 55501 . + . ID=gene-SO06_RS19900;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=SO06_RS19900 NZ_MYDG01000020.1 Protein Homology CDS 54602 55501 . + 0 ID=cds-WP_023232118.1;Parent=gene-SO06_RS19900;Dbxref=GenBank:WP_023232118.1;Name=WP_023232118.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=SO06_RS19900;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_023232118.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 55498 57144 . + . ID=gene-SO06_RS19905;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=SO06_RS19905 NZ_MYDG01000020.1 Protein Homology CDS 55498 57144 . + 0 ID=cds-WP_031619476.1;Parent=gene-SO06_RS19905;Dbxref=GenBank:WP_031619476.1;Name=WP_031619476.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=SO06_RS19905;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_031619476.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 57141 57476 . + . ID=gene-SO06_RS19910;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=SO06_RS19910 NZ_MYDG01000020.1 Protein Homology CDS 57141 57476 . + 0 ID=cds-WP_000579484.1;Parent=gene-SO06_RS19910;Dbxref=GenBank:WP_000579484.1;Name=WP_000579484.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=SO06_RS19910;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000579484.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 57476 57853 . + . ID=gene-SO06_RS19915;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=SO06_RS19915 NZ_MYDG01000020.1 Protein Homology CDS 57476 57853 . + 0 ID=cds-WP_000538694.1;Parent=gene-SO06_RS19915;Dbxref=GenBank:WP_000538694.1;Name=WP_000538694.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=SO06_RS19915;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538694.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 57848 58105 . - . ID=gene-SO06_RS19920;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=SO06_RS19920 NZ_MYDG01000020.1 Protein Homology CDS 57848 58105 . - 0 ID=cds-WP_000455132.1;Parent=gene-SO06_RS19920;Dbxref=GenBank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=SO06_RS19920;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 58203 59570 . - . ID=gene-SO06_RS19925;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=SO06_RS19925 NZ_MYDG01000020.1 Protein Homology CDS 58203 59570 . - 0 ID=cds-WP_048348908.1;Parent=gene-SO06_RS19925;Dbxref=GenBank:WP_048348908.1;Name=WP_048348908.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=SO06_RS19925;product=o-succinylbenzoate--CoA ligase;protein_id=WP_048348908.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 59567 60529 . - . ID=gene-SO06_RS19930;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=SO06_RS19930 NZ_MYDG01000020.1 Protein Homology CDS 59567 60529 . - 0 ID=cds-WP_023232213.1;Parent=gene-SO06_RS19930;Dbxref=GenBank:WP_023232213.1;Name=WP_023232213.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=SO06_RS19930;product=o-succinylbenzoate synthase;protein_id=WP_023232213.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 60529 61386 . - . ID=gene-SO06_RS19935;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=SO06_RS19935 NZ_MYDG01000020.1 Protein Homology CDS 60529 61386 . - 0 ID=cds-WP_000640013.1;Parent=gene-SO06_RS19935;Dbxref=GenBank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=SO06_RS19935;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 61401 62159 . - . ID=gene-SO06_RS19940;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=SO06_RS19940 NZ_MYDG01000020.1 Protein Homology CDS 61401 62159 . - 0 ID=cds-WP_000979144.1;Parent=gene-SO06_RS19940;Dbxref=GenBank:WP_000979144.1;Name=WP_000979144.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=SO06_RS19940;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000979144.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 62156 63826 . - . ID=gene-SO06_RS19945;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=SO06_RS19945 NZ_MYDG01000020.1 Protein Homology CDS 62156 63826 . - 0 ID=cds-WP_000116395.1;Parent=gene-SO06_RS19945;Dbxref=GenBank:WP_000116395.1;Name=WP_000116395.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=SO06_RS19945;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_000116395.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 63912 65207 . - . ID=gene-SO06_RS19950;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=SO06_RS19950 NZ_MYDG01000020.1 Protein Homology CDS 63912 65207 . - 0 ID=cds-WP_000555674.1;Parent=gene-SO06_RS19950;Dbxref=GenBank:WP_000555674.1;Name=WP_000555674.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=SO06_RS19950;product=isochorismate synthase MenF;protein_id=WP_000555674.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 65308 65613 . - . ID=gene-SO06_RS19955;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=SO06_RS19955 NZ_MYDG01000020.1 Protein Homology CDS 65308 65613 . - 0 ID=cds-WP_001519663.1;Parent=gene-SO06_RS19955;Dbxref=GenBank:WP_001519663.1;Name=WP_001519663.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=SO06_RS19955;product=stress response protein ElaB;protein_id=WP_001519663.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 65668 66129 . - . ID=gene-SO06_RS19960;Name=SO06_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19960 NZ_MYDG01000020.1 Protein Homology CDS 65668 66129 . - 0 ID=cds-WP_000568155.1;Parent=gene-SO06_RS19960;Dbxref=GenBank:WP_000568155.1;Name=WP_000568155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=SO06_RS19960;product=GNAT family N-acetyltransferase;protein_id=WP_000568155.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 66190 67107 . + . ID=gene-SO06_RS19965;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=SO06_RS19965 NZ_MYDG01000020.1 Protein Homology CDS 66190 67107 . + 0 ID=cds-WP_000419093.1;Parent=gene-SO06_RS19965;Dbxref=GenBank:WP_000419093.1;Name=WP_000419093.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=SO06_RS19965;product=ribonuclease BN;protein_id=WP_000419093.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 67173 68174 . + . ID=gene-SO06_RS19970;Name=SO06_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19970 NZ_MYDG01000020.1 Protein Homology CDS 67173 68174 . + 0 ID=cds-WP_000368560.1;Parent=gene-SO06_RS19970;Dbxref=GenBank:WP_000368560.1;Name=WP_000368560.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=SO06_RS19970;product=chemotaxis protein;protein_id=WP_000368560.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 68215 70005 . - . ID=gene-SO06_RS19975;Name=SO06_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19975 NZ_MYDG01000020.1 Protein Homology CDS 68215 70005 . - 0 ID=cds-WP_023232214.1;Parent=gene-SO06_RS19975;Dbxref=GenBank:WP_023232214.1;Name=WP_023232214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=SO06_RS19975;product=vWA domain-containing protein;protein_id=WP_023232214.1;transl_table=11 NZ_MYDG01000020.1 RefSeq gene 70724 74521 . - . ID=gene-SO06_RS19980;Name=SO06_RS19980;end_range=74521,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19980;partial=true NZ_MYDG01000020.1 Protein Homology CDS 70724 74521 . - 0 ID=cds-WP_139783743.1;Parent=gene-SO06_RS19980;Dbxref=GenBank:WP_139783743.1;Name=WP_139783743.1;Ontology_term=GO:0019867;end_range=74521,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747458.1;locus_tag=SO06_RS19980;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_139783743.1;transl_table=11 ##sequence-region NZ_MYDG01000021.1 1 73293 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000021.1 RefSeq region 1 73293 . + . ID=NZ_MYDG01000021.1:1..73293;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000021.1 RefSeq pseudogene 1 67 . - . ID=gene-SO06_RS19985;Name=SO06_RS19985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS19985;partial=true;pseudo=true;start_range=.,1 NZ_MYDG01000021.1 Protein Homology CDS 1 67 . - 0 ID=cds-SO06_RS19985;Parent=gene-SO06_RS19985;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=SO06_RS19985;partial=true;product=cytochrome c biogenesis heme-transporting ATPase CcmA;pseudo=true;start_range=.,1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 73 1473 . - . ID=gene-SO06_RS19990;Name=SO06_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS19990 NZ_MYDG01000021.1 Protein Homology CDS 73 1473 . - 0 ID=cds-WP_023232193.1;Parent=gene-SO06_RS19990;Dbxref=GenBank:WP_023232193.1;Name=WP_023232193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=SO06_RS19990;product=cytochrome-c peroxidase;protein_id=WP_023232193.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 1663 2295 . - . ID=gene-SO06_RS19995;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=SO06_RS19995 NZ_MYDG01000021.1 Protein Homology CDS 1663 2295 . - 0 ID=cds-WP_000595421.1;Parent=gene-SO06_RS19995;Dbxref=GenBank:WP_000595421.1;Name=WP_000595421.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=SO06_RS19995;product=molecular chaperone TorD;protein_id=WP_000595421.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 2288 4840 . - . ID=gene-SO06_RS20000;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=SO06_RS20000 NZ_MYDG01000021.1 Protein Homology CDS 2288 4840 . - 0 ID=cds-WP_000790685.1;Parent=gene-SO06_RS20000;Dbxref=GenBank:WP_000790685.1;Name=WP_000790685.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=SO06_RS20000;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_000790685.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 4830 6014 . - . ID=gene-SO06_RS20005;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=SO06_RS20005 NZ_MYDG01000021.1 Protein Homology CDS 4830 6014 . - 0 ID=cds-WP_001230256.1;Parent=gene-SO06_RS20005;Dbxref=GenBank:WP_001230256.1;Name=WP_001230256.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=SO06_RS20005;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230256.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 6144 6836 . + . ID=gene-SO06_RS20010;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=SO06_RS20010 NZ_MYDG01000021.1 Protein Homology CDS 6144 6836 . + 0 ID=cds-WP_001562512.1;Parent=gene-SO06_RS20010;Dbxref=GenBank:WP_001562512.1;Name=WP_001562512.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=SO06_RS20010;product=two-component system response regulator TorR;protein_id=WP_001562512.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 6809 7849 . - . ID=gene-SO06_RS20015;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=SO06_RS20015 NZ_MYDG01000021.1 Protein Homology CDS 6809 7849 . - 0 ID=cds-WP_023200725.1;Parent=gene-SO06_RS20015;Dbxref=GenBank:WP_023200725.1;Name=WP_023200725.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=SO06_RS20015;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_023200725.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 7929 10664 . + . ID=gene-SO06_RS20020;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=SO06_RS20020 NZ_MYDG01000021.1 Protein Homology CDS 7929 10664 . + 0 ID=cds-WP_023232192.1;Parent=gene-SO06_RS20020;Dbxref=GenBank:WP_023232192.1;Name=WP_023232192.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=SO06_RS20020;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_023232192.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 10769 11896 . - . ID=gene-SO06_RS20025;Name=SO06_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20025 NZ_MYDG01000021.1 Protein Homology CDS 10769 11896 . - 0 ID=cds-WP_023232191.1;Parent=gene-SO06_RS20025;Dbxref=GenBank:WP_023232191.1;Name=WP_023232191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762570.1;locus_tag=SO06_RS20025;product=DUF4056 domain-containing protein;protein_id=WP_023232191.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 11893 13032 . - . ID=gene-SO06_RS20030;Name=SO06_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20030 NZ_MYDG01000021.1 Protein Homology CDS 11893 13032 . - 0 ID=cds-WP_023138228.1;Parent=gene-SO06_RS20030;Dbxref=GenBank:WP_023138228.1;Name=WP_023138228.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528293.1;locus_tag=SO06_RS20030;product=BamA/TamA family outer membrane protein;protein_id=WP_023138228.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 13029 14051 . - . ID=gene-SO06_RS20035;Name=SO06_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20035 NZ_MYDG01000021.1 Protein Homology CDS 13029 14051 . - 0 ID=cds-WP_000747398.1;Parent=gene-SO06_RS20035;Dbxref=GenBank:WP_000747398.1;Name=WP_000747398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528257.1;locus_tag=SO06_RS20035;product=hypothetical protein;protein_id=WP_000747398.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 14253 15065 . - . ID=gene-SO06_RS20040;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=SO06_RS20040 NZ_MYDG01000021.1 Protein Homology CDS 14253 15065 . - 0 ID=cds-WP_000985571.1;Parent=gene-SO06_RS20040;Dbxref=GenBank:WP_000985571.1;Name=WP_000985571.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=SO06_RS20040;product=sugar-phosphatase;protein_id=WP_000985571.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 15505 16197 . + . ID=gene-SO06_RS20050;Name=SO06_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20050 NZ_MYDG01000021.1 Protein Homology CDS 15505 16197 . + 0 ID=cds-WP_024148487.1;Parent=gene-SO06_RS20050;Dbxref=GenBank:WP_024148487.1;Name=WP_024148487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691472.1;locus_tag=SO06_RS20050;product=hypothetical protein;protein_id=WP_024148487.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 16548 18962 . - . ID=gene-SO06_RS20055;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=SO06_RS20055 NZ_MYDG01000021.1 Protein Homology CDS 16548 18962 . - 0 ID=cds-WP_000072047.1;Parent=gene-SO06_RS20055;Dbxref=GenBank:WP_000072047.1;Name=WP_000072047.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=SO06_RS20055;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072047.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 18991 20064 . - . ID=gene-SO06_RS20060;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=SO06_RS20060 NZ_MYDG01000021.1 Protein Homology CDS 18991 20064 . - 0 ID=cds-WP_000059373.1;Parent=gene-SO06_RS20060;Dbxref=GenBank:WP_000059373.1;Name=WP_000059373.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=SO06_RS20060;product=DNA replication/repair protein RecF;protein_id=WP_000059373.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 20262 21362 . - . ID=gene-SO06_RS20065;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=SO06_RS20065 NZ_MYDG01000021.1 Protein Homology CDS 20262 21362 . - 0 ID=cds-WP_000673474.1;Parent=gene-SO06_RS20065;Dbxref=GenBank:WP_000673474.1;Name=WP_000673474.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=SO06_RS20065;product=DNA polymerase III subunit beta;protein_id=WP_000673474.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 21367 22767 . - . ID=gene-SO06_RS20070;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=SO06_RS20070 NZ_MYDG01000021.1 Protein Homology CDS 21367 22767 . - 0 ID=cds-WP_000059093.1;Parent=gene-SO06_RS20070;Dbxref=GenBank:WP_000059093.1;Name=WP_000059093.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=SO06_RS20070;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059093.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 23107 23199 . + . ID=gene-SO06_RS25840;Name=SO06_RS25840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25840 NZ_MYDG01000021.1 Protein Homology CDS 23107 23199 . + 0 ID=cds-WP_418142141.1;Parent=gene-SO06_RS25840;Dbxref=GenBank:WP_418142141.1;Name=WP_418142141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.1;locus_tag=SO06_RS25840;product=hypothetical protein;protein_id=WP_418142141.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 23428 23568 . + . ID=gene-SO06_RS20075;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=SO06_RS20075 NZ_MYDG01000021.1 Protein Homology CDS 23428 23568 . + 0 ID=cds-WP_000831330.1;Parent=gene-SO06_RS20075;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=SO06_RS20075;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 23585 23944 . + . ID=gene-SO06_RS20080;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=SO06_RS20080 NZ_MYDG01000021.1 Protein Homology CDS 23585 23944 . + 0 ID=cds-WP_000239725.1;Parent=gene-SO06_RS20080;Dbxref=GenBank:WP_000239725.1;Name=WP_000239725.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=SO06_RS20080;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 23908 24165 . + . ID=gene-SO06_RS20085;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=SO06_RS20085 NZ_MYDG01000021.1 Protein Homology CDS 23908 24165 . + 0 ID=cds-WP_001307474.1;Parent=gene-SO06_RS20085;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=SO06_RS20085;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 24168 25814 . + . ID=gene-SO06_RS20090;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=SO06_RS20090 NZ_MYDG01000021.1 Protein Homology CDS 24168 25814 . + 0 ID=cds-WP_000378283.1;Parent=gene-SO06_RS20090;Dbxref=GenBank:WP_000378283.1;Name=WP_000378283.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=SO06_RS20090;product=membrane protein insertase YidC;protein_id=WP_000378283.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 25955 27319 . + . ID=gene-SO06_RS20095;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=SO06_RS20095 NZ_MYDG01000021.1 Protein Homology CDS 25955 27319 . + 0 ID=cds-WP_001726954.1;Parent=gene-SO06_RS20095;Dbxref=GenBank:WP_001726954.1;Name=WP_001726954.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=SO06_RS20095;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_001726954.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 27502 28689 . + . ID=gene-SO06_RS20100;Name=SO06_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20100 NZ_MYDG01000021.1 Protein Homology CDS 27502 28689 . + 0 ID=cds-WP_080204277.1;Parent=gene-SO06_RS20100;Dbxref=GenBank:WP_080204277.1;Name=WP_080204277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462746.1;locus_tag=SO06_RS20100;product=MFS transporter;protein_id=WP_080204277.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 28658 29617 . + . ID=gene-SO06_RS20105;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=SO06_RS20105 NZ_MYDG01000021.1 Protein Homology CDS 28658 29617 . + 0 ID=cds-WP_000749365.1;Parent=gene-SO06_RS20105;Dbxref=GenBank:WP_000749365.1;Name=WP_000749365.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=SO06_RS20105;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000749365.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 29775 30530 . + . ID=gene-SO06_RS20110;Name=SO06_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20110 NZ_MYDG01000021.1 Protein Homology CDS 29775 30530 . + 0 ID=cds-WP_023232185.1;Parent=gene-SO06_RS20110;Dbxref=GenBank:WP_023232185.1;Name=WP_023232185.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=SO06_RS20110;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_023232185.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 30530 31114 . + . ID=gene-SO06_RS20115;Name=SO06_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20115 NZ_MYDG01000021.1 Protein Homology CDS 30530 31114 . + 0 ID=cds-WP_001527038.1;Parent=gene-SO06_RS20115;Dbxref=GenBank:WP_001527038.1;Name=WP_001527038.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=SO06_RS20115;product=NADPH-dependent FMN reductase;protein_id=WP_001527038.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 31159 32496 . - . ID=gene-SO06_RS20120;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=SO06_RS20120 NZ_MYDG01000021.1 Protein Homology CDS 31159 32496 . - 0 ID=cds-WP_001519317.1;Parent=gene-SO06_RS20120;Dbxref=GenBank:WP_001519317.1;Name=WP_001519317.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=SO06_RS20120;product=adenine permease AdeP;protein_id=WP_001519317.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 32665 33330 . + . ID=gene-SO06_RS20125;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=SO06_RS20125 NZ_MYDG01000021.1 Protein Homology CDS 32665 33330 . + 0 ID=cds-WP_023232184.1;Parent=gene-SO06_RS20125;Dbxref=GenBank:WP_023232184.1;Name=WP_023232184.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=SO06_RS20125;product=6-phosphogluconate phosphatase;protein_id=WP_023232184.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 33425 34150 . - . ID=gene-SO06_RS20130;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=SO06_RS20130 NZ_MYDG01000021.1 Protein Homology CDS 33425 34150 . - 0 ID=cds-WP_000377800.1;Parent=gene-SO06_RS20130;Dbxref=GenBank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=SO06_RS20130;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 34165 34938 . - . ID=gene-SO06_RS20135;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=SO06_RS20135 NZ_MYDG01000021.1 Protein Homology CDS 34165 34938 . - 0 ID=cds-WP_000063118.1;Parent=gene-SO06_RS20135;Dbxref=GenBank:WP_000063118.1;Name=WP_000063118.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=SO06_RS20135;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 35025 35915 . - . ID=gene-SO06_RS20140;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=SO06_RS20140 NZ_MYDG01000021.1 Protein Homology CDS 35025 35915 . - 0 ID=cds-WP_000212197.1;Parent=gene-SO06_RS20140;Dbxref=GenBank:WP_000212197.1;Name=WP_000212197.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=SO06_RS20140;product=phosphate ABC transporter permease PstA;protein_id=WP_000212197.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 35915 36874 . - . ID=gene-SO06_RS20145;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=SO06_RS20145 NZ_MYDG01000021.1 Protein Homology CDS 35915 36874 . - 0 ID=cds-WP_000741630.1;Parent=gene-SO06_RS20145;Dbxref=GenBank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=SO06_RS20145;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 37010 38050 . - . ID=gene-SO06_RS20150;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=SO06_RS20150 NZ_MYDG01000021.1 Protein Homology CDS 37010 38050 . - 0 ID=cds-WP_000867131.1;Parent=gene-SO06_RS20150;Dbxref=GenBank:WP_000867131.1;Name=WP_000867131.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=SO06_RS20150;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867131.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 38216 39589 . - . ID=gene-SO06_RS20155;Name=SO06_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20155 NZ_MYDG01000021.1 Protein Homology CDS 38216 39589 . - 0 ID=cds-WP_023232183.1;Parent=gene-SO06_RS20155;Dbxref=GenBank:WP_023232183.1;Name=WP_023232183.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=SO06_RS20155;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_023232183.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 39638 40456 . - . ID=gene-SO06_RS20160;Name=SO06_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20160 NZ_MYDG01000021.1 Protein Homology CDS 39638 40456 . - 0 ID=cds-WP_000166709.1;Parent=gene-SO06_RS20160;Dbxref=GenBank:WP_000166709.1;Name=WP_000166709.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=SO06_RS20160;product=shikimate 5-dehydrogenase;protein_id=WP_000166709.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 40551 42308 . + . ID=gene-SO06_RS20165;Name=SO06_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20165 NZ_MYDG01000021.1 Protein Homology CDS 40551 42308 . + 0 ID=cds-WP_023232182.1;Parent=gene-SO06_RS20165;Dbxref=GenBank:WP_023232182.1;Name=WP_023232182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=SO06_RS20165;product=SgrR family transcriptional regulator;protein_id=WP_023232182.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 42459 44288 . - . ID=gene-SO06_RS20170;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=SO06_RS20170 NZ_MYDG01000021.1 Protein Homology CDS 42459 44288 . - 0 ID=cds-WP_023232181.1;Parent=gene-SO06_RS20170;Dbxref=GenBank:WP_023232181.1;Name=WP_023232181.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=SO06_RS20170;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_023232181.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 44477 45847 . - . ID=gene-SO06_RS20175;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=SO06_RS20175 NZ_MYDG01000021.1 Protein Homology CDS 44477 45847 . - 0 ID=cds-WP_000934854.1;Parent=gene-SO06_RS20175;Dbxref=GenBank:WP_000934854.1;Name=WP_000934854.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=SO06_RS20175;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934854.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 46167 46865 . - . ID=gene-SO06_RS20185;Name=SO06_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20185 NZ_MYDG01000021.1 Protein Homology CDS 46167 46865 . - 0 ID=cds-WP_000009904.1;Parent=gene-SO06_RS20185;Dbxref=GenBank:WP_000009904.1;Name=WP_000009904.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=SO06_RS20185;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000009904.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 47095 47514 . - . ID=gene-SO06_RS20190;Name=SO06_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20190 NZ_MYDG01000021.1 Protein Homology CDS 47095 47514 . - 0 ID=cds-WP_001251971.1;Parent=gene-SO06_RS20190;Dbxref=GenBank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=SO06_RS20190;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 47535 48917 . - . ID=gene-SO06_RS20195;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=SO06_RS20195 NZ_MYDG01000021.1 Protein Homology CDS 47535 48917 . - 0 ID=cds-WP_000190499.1;Parent=gene-SO06_RS20195;Dbxref=GenBank:WP_000190499.1;Name=WP_000190499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=SO06_RS20195;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 48944 49807 . - . ID=gene-SO06_RS20200;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=SO06_RS20200 NZ_MYDG01000021.1 Protein Homology CDS 48944 49807 . - 0 ID=cds-WP_000896506.1;Parent=gene-SO06_RS20200;Dbxref=GenBank:WP_000896506.1;Name=WP_000896506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=SO06_RS20200;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896506.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 49858 51399 . - . ID=gene-SO06_RS20205;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=SO06_RS20205 NZ_MYDG01000021.1 Protein Homology CDS 49858 51399 . - 0 ID=cds-WP_001176751.1;Parent=gene-SO06_RS20205;Dbxref=GenBank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=SO06_RS20205;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 51412 51945 . - . ID=gene-SO06_RS20210;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=SO06_RS20210 NZ_MYDG01000021.1 Protein Homology CDS 51412 51945 . - 0 ID=cds-WP_001288957.1;Parent=gene-SO06_RS20210;Dbxref=GenBank:WP_001288957.1;Name=WP_001288957.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=SO06_RS20210;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 51960 52430 . - . ID=gene-SO06_RS20215;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=SO06_RS20215 NZ_MYDG01000021.1 Protein Homology CDS 51960 52430 . - 0 ID=cds-WP_001052212.1;Parent=gene-SO06_RS20215;Dbxref=GenBank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=SO06_RS20215;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 52490 52729 . - . ID=gene-SO06_RS20220;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=SO06_RS20220 NZ_MYDG01000021.1 Protein Homology CDS 52490 52729 . - 0 ID=cds-WP_000429386.1;Parent=gene-SO06_RS20220;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=SO06_RS20220;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 52776 53591 . - . ID=gene-SO06_RS20225;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=SO06_RS20225 NZ_MYDG01000021.1 Protein Homology CDS 52776 53591 . - 0 ID=cds-WP_000135632.1;Parent=gene-SO06_RS20225;Dbxref=GenBank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=SO06_RS20225;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 53600 53980 . - . ID=gene-SO06_RS20230;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=SO06_RS20230 NZ_MYDG01000021.1 Protein Homology CDS 53600 53980 . - 0 ID=cds-WP_000116685.1;Parent=gene-SO06_RS20230;Dbxref=GenBank:WP_000116685.1;Name=WP_000116685.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=SO06_RS20230;product=F0F1 ATP synthase subunit I;protein_id=WP_000116685.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 54596 55219 . - . ID=gene-SO06_RS20235;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=SO06_RS20235 NZ_MYDG01000021.1 Protein Homology CDS 54596 55219 . - 0 ID=cds-WP_023232180.1;Parent=gene-SO06_RS20235;Dbxref=GenBank:WP_023232180.1;Name=WP_023232180.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=SO06_RS20235;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_023232180.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 55322 57211 . - . ID=gene-SO06_RS20240;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=SO06_RS20240 NZ_MYDG01000021.1 Protein Homology CDS 55322 57211 . - 0 ID=cds-WP_000499872.1;Parent=gene-SO06_RS20240;Dbxref=GenBank:WP_000499872.1;Name=WP_000499872.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=SO06_RS20240;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499872.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 57590 58033 . - . ID=gene-SO06_RS20245;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=SO06_RS20245 NZ_MYDG01000021.1 Protein Homology CDS 57590 58033 . - 0 ID=cds-WP_000763722.1;Parent=gene-SO06_RS20245;Dbxref=GenBank:WP_000763722.1;Name=WP_000763722.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=SO06_RS20245;product=FMN-binding protein MioC;protein_id=WP_000763722.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 58123 58581 . - . ID=gene-SO06_RS20250;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=SO06_RS20250 NZ_MYDG01000021.1 Protein Homology CDS 58123 58581 . - 0 ID=cds-WP_000433016.1;Parent=gene-SO06_RS20250;Dbxref=GenBank:WP_000433016.1;Name=WP_000433016.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=SO06_RS20250;product=transcriptional regulator AsnC;protein_id=WP_000433016.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 58732 59724 . + . ID=gene-SO06_RS20255;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=SO06_RS20255 NZ_MYDG01000021.1 Protein Homology CDS 58732 59724 . + 0 ID=cds-WP_000845123.1;Parent=gene-SO06_RS20255;Dbxref=GenBank:WP_000845123.1;Name=WP_000845123.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=SO06_RS20255;product=aspartate--ammonia ligase;protein_id=WP_000845123.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 59729 61180 . - . ID=gene-SO06_RS20260;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=SO06_RS20260 NZ_MYDG01000021.1 Protein Homology CDS 59729 61180 . - 0 ID=cds-WP_000956595.1;Parent=gene-SO06_RS20260;Dbxref=GenBank:WP_000956595.1;Name=WP_000956595.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=SO06_RS20260;product=ATPase RavA stimulator ViaA;protein_id=WP_000956595.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 61174 62670 . - . ID=gene-SO06_RS20265;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=SO06_RS20265 NZ_MYDG01000021.1 Protein Homology CDS 61174 62670 . - 0 ID=cds-WP_023232179.1;Parent=gene-SO06_RS20265;Dbxref=GenBank:WP_023232179.1;Name=WP_023232179.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=SO06_RS20265;product=ATPase RavA;protein_id=WP_023232179.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 63018 64886 . + . ID=gene-SO06_RS20270;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=SO06_RS20270 NZ_MYDG01000021.1 Protein Homology CDS 63018 64886 . + 0 ID=cds-WP_000102338.1;Parent=gene-SO06_RS20270;Dbxref=GenBank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=SO06_RS20270;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 65103 65522 . + . ID=gene-SO06_RS20275;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=SO06_RS20275 NZ_MYDG01000021.1 Protein Homology CDS 65103 65522 . + 0 ID=cds-WP_000715944.1;Parent=gene-SO06_RS20275;Dbxref=GenBank:WP_000715944.1;Name=WP_000715944.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=SO06_RS20275;product=D-ribose pyranase;protein_id=WP_000715944.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 65530 67035 . + . ID=gene-SO06_RS20280;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=SO06_RS20280 NZ_MYDG01000021.1 Protein Homology CDS 65530 67035 . + 0 ID=cds-WP_000339359.1;Parent=gene-SO06_RS20280;Dbxref=GenBank:WP_000339359.1;Name=WP_000339359.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=SO06_RS20280;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000339359.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 67041 68006 . + . ID=gene-SO06_RS20285;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=SO06_RS20285 NZ_MYDG01000021.1 Protein Homology CDS 67041 68006 . + 0 ID=cds-WP_000211345.1;Parent=gene-SO06_RS20285;Dbxref=GenBank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=SO06_RS20285;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 68031 68921 . + . ID=gene-SO06_RS20290;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=SO06_RS20290 NZ_MYDG01000021.1 Protein Homology CDS 68031 68921 . + 0 ID=cds-WP_023254734.1;Parent=gene-SO06_RS20290;Dbxref=GenBank:WP_023254734.1;Name=WP_023254734.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=SO06_RS20290;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_023254734.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 69054 69983 . + . ID=gene-SO06_RS20295;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=SO06_RS20295 NZ_MYDG01000021.1 Protein Homology CDS 69054 69983 . + 0 ID=cds-WP_000844728.1;Parent=gene-SO06_RS20295;Dbxref=GenBank:WP_000844728.1;Name=WP_000844728.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=SO06_RS20295;product=ribokinase;protein_id=WP_000844728.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 69987 70985 . + . ID=gene-SO06_RS20300;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=SO06_RS20300 NZ_MYDG01000021.1 Protein Homology CDS 69987 70985 . + 0 ID=cds-WP_000224487.1;Parent=gene-SO06_RS20300;Dbxref=GenBank:WP_000224487.1;Name=WP_000224487.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=SO06_RS20300;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224487.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 70951 72378 . - . ID=gene-SO06_RS20305;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=SO06_RS20305 NZ_MYDG01000021.1 Protein Homology CDS 70951 72378 . - 0 ID=cds-WP_000202071.1;Parent=gene-SO06_RS20305;Dbxref=GenBank:WP_000202071.1;Name=WP_000202071.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=SO06_RS20305;product=multidrug transporter subunit MdtD;protein_id=WP_000202071.1;transl_table=11 NZ_MYDG01000021.1 RefSeq gene 72390 73094 . - . ID=gene-SO06_RS20310;Name=SO06_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20310 NZ_MYDG01000021.1 Protein Homology CDS 72390 73094 . - 0 ID=cds-WP_001131144.1;Parent=gene-SO06_RS20310;Dbxref=GenBank:WP_001131144.1;Name=WP_001131144.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=SO06_RS20310;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131144.1;transl_table=11 ##sequence-region NZ_MYDG01000022.1 1 70617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000022.1 RefSeq region 1 70617 . + . ID=NZ_MYDG01000022.1:1..70617;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000022.1 RefSeq gene 51 1220 . - . ID=gene-SO06_RS20315;Name=SO06_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20315 NZ_MYDG01000022.1 Protein Homology CDS 51 1220 . - 0 ID=cds-WP_425291544.1;Parent=gene-SO06_RS20315;Dbxref=GenBank:WP_425291544.1;Name=WP_425291544.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0005524,GO:0016893,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,obsolete endonuclease activity%2C active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters|0016893||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: protein motif:HMM:NF020606.6;locus_tag=SO06_RS20315;product=integrase catalytic domain-containing protein;protein_id=WP_425291544.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 1607 2455 . - . ID=gene-SO06_RS20325;Name=SO06_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20325 NZ_MYDG01000022.1 Protein Homology CDS 1607 2455 . - 0 ID=cds-WP_001057996.1;Parent=gene-SO06_RS20325;Dbxref=GenBank:WP_001057996.1;Name=WP_001057996.1;Ontology_term=GO:0003677,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001057990.1;locus_tag=SO06_RS20325;product=3'-5' exonuclease;protein_id=WP_001057996.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 2495 2773 . - . ID=gene-SO06_RS20330;Name=yacB;gbkey=Gene;gene=yacB;gene_biotype=protein_coding;locus_tag=SO06_RS20330 NZ_MYDG01000022.1 Protein Homology CDS 2495 2773 . - 0 ID=cds-WP_001384452.1;Parent=gene-SO06_RS20330;Dbxref=GenBank:WP_001384452.1;Name=WP_001384452.1;gbkey=CDS;gene=yacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013009346.1;locus_tag=SO06_RS20330;product=type II toxin-antitoxin system toxin YacB;protein_id=WP_001384452.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 2773 3042 . - . ID=gene-SO06_RS20335;Name=yacA;gbkey=Gene;gene=yacA;gene_biotype=protein_coding;locus_tag=SO06_RS20335 NZ_MYDG01000022.1 Protein Homology CDS 2773 3042 . - 0 ID=cds-WP_000079928.1;Parent=gene-SO06_RS20335;Dbxref=GenBank:WP_000079928.1;Name=WP_000079928.1;gbkey=CDS;gene=yacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015056448.1;locus_tag=SO06_RS20335;product=type II toxin-antitoxin system antitoxin YacA;protein_id=WP_000079928.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 3951 4982 . - . ID=gene-SO06_RS20350;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=SO06_RS20350 NZ_MYDG01000022.1 Protein Homology CDS 3951 4982 . - 0 ID=cds-WP_000907873.1;Parent=gene-SO06_RS20350;Dbxref=GenBank:WP_000907873.1;Name=WP_000907873.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907860.1;locus_tag=SO06_RS20350;product=plasmid replication initiator RepA;protein_id=WP_000907873.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 5955 6218 . + . ID=gene-SO06_RS25845;Name=SO06_RS25845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25845 NZ_MYDG01000022.1 Protein Homology CDS 5955 6218 . + 0 ID=cds-WP_001324596.1;Parent=gene-SO06_RS25845;Dbxref=GenBank:WP_001324596.1;Name=WP_001324596.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.6;locus_tag=SO06_RS25845;product=ash family protein;protein_id=WP_001324596.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 6136 6423 . + . ID=gene-SO06_RS20370;Name=SO06_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20370 NZ_MYDG01000022.1 Protein Homology CDS 6136 6423 . + 0 ID=cds-WP_000074849.1;Parent=gene-SO06_RS20370;Dbxref=GenBank:WP_000074849.1;Name=WP_000074849.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074849.1;locus_tag=SO06_RS20370;product=helix-turn-helix transcriptional regulator;protein_id=WP_000074849.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 6865 7398 . + . ID=gene-SO06_RS20380;Name=SO06_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20380 NZ_MYDG01000022.1 Protein Homology CDS 6865 7398 . + 0 ID=cds-WP_001303319.1;Parent=gene-SO06_RS20380;Dbxref=GenBank:WP_001303319.1;Name=WP_001303319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001303319.1;locus_tag=SO06_RS20380;product=transcription termination/antitermination NusG family protein;protein_id=WP_001303319.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 7652 8335 . + . ID=gene-SO06_RS20390;Name=SO06_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20390 NZ_MYDG01000022.1 Protein Homology CDS 7652 8335 . + 0 ID=cds-WP_000213857.1;Parent=gene-SO06_RS20390;Dbxref=GenBank:WP_000213857.1;Name=WP_000213857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213862.1;locus_tag=SO06_RS20390;product=conjugal transfer protein TraC;protein_id=WP_000213857.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 8349 8915 . + . ID=gene-SO06_RS20395;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=SO06_RS20395 NZ_MYDG01000022.1 Protein Homology CDS 8349 8915 . + 0 ID=cds-WP_000776428.1;Parent=gene-SO06_RS20395;Dbxref=GenBank:WP_000776428.1;Name=WP_000776428.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000776428.1;locus_tag=SO06_RS20395;product=protein TraD;protein_id=WP_000776428.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 9183 9437 . + . ID=gene-SO06_RS20400;Name=SO06_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20400 NZ_MYDG01000022.1 Protein Homology CDS 9183 9437 . + 0 ID=cds-WP_001136192.1;Parent=gene-SO06_RS20400;Dbxref=GenBank:WP_001136192.1;Name=WP_001136192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136193.1;locus_tag=SO06_RS20400;product=PilI type IV pilus biogenesis protein;protein_id=WP_001136192.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 9480 9932 . + . ID=gene-SO06_RS20405;Name=SO06_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20405 NZ_MYDG01000022.1 Protein Homology CDS 9480 9932 . + 0 ID=cds-WP_000008892.1;Parent=gene-SO06_RS20405;Dbxref=GenBank:WP_000008892.1;Name=WP_000008892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008891.1;locus_tag=SO06_RS20405;product=hypothetical protein;protein_id=WP_000008892.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 9982 10572 . + . ID=gene-SO06_RS25725;Name=SO06_RS25725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25725 NZ_MYDG01000022.1 Protein Homology CDS 9982 10572 . + 0 ID=cds-WP_001334619.1;Parent=gene-SO06_RS25725;Dbxref=GenBank:WP_001334619.1;Name=WP_001334619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334619.1;locus_tag=SO06_RS25725;product=hypothetical protein;protein_id=WP_001334619.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 10606 11673 . + . ID=gene-SO06_RS20415;Name=pilL;gbkey=Gene;gene=pilL;gene_biotype=protein_coding;locus_tag=SO06_RS20415 NZ_MYDG01000022.1 Protein Homology CDS 10606 11673 . + 0 ID=cds-WP_000742600.1;Parent=gene-SO06_RS20415;Dbxref=GenBank:WP_000742600.1;Name=WP_000742600.1;gbkey=CDS;gene=pilL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001360287.1;locus_tag=SO06_RS20415;product=type IV pilus biogenesis lipoprotein PilL;protein_id=WP_000742600.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 11673 12110 . + . ID=gene-SO06_RS20420;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=SO06_RS20420 NZ_MYDG01000022.1 Protein Homology CDS 11673 12110 . + 0 ID=cds-WP_000539807.1;Parent=gene-SO06_RS20420;Dbxref=GenBank:WP_000539807.1;Name=WP_000539807.1;gbkey=CDS;gene=pilM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744073.1;locus_tag=SO06_RS20420;product=type IV pilus biogenesis protein PilM;protein_id=WP_000539807.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 12124 13806 . + . ID=gene-SO06_RS20425;Name=SO06_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20425 NZ_MYDG01000022.1 Protein Homology CDS 12124 13806 . + 0 ID=cds-WP_000748143.1;Parent=gene-SO06_RS20425;Dbxref=GenBank:WP_000748143.1;Name=WP_000748143.1;Ontology_term=GO:0009297,GO:0009306,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744074.1;locus_tag=SO06_RS20425;product=PilN family type IVB pilus formation outer membrane protein;protein_id=WP_000748143.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 13799 15094 . + . ID=gene-SO06_RS20430;Name=pilO2;gbkey=Gene;gene=pilO2;gene_biotype=protein_coding;locus_tag=SO06_RS20430 NZ_MYDG01000022.1 Protein Homology CDS 13799 15094 . + 0 ID=cds-WP_000752774.1;Parent=gene-SO06_RS20430;Dbxref=GenBank:WP_000752774.1;Name=WP_000752774.1;gbkey=CDS;gene=pilO2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682966.1;locus_tag=SO06_RS20430;product=type 4b pilus protein PilO2;protein_id=WP_000752774.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 15081 15533 . + . ID=gene-SO06_RS20435;Name=pilP;gbkey=Gene;gene=pilP;gene_biotype=protein_coding;locus_tag=SO06_RS20435 NZ_MYDG01000022.1 Protein Homology CDS 15081 15533 . + 0 ID=cds-WP_001247336.1;Parent=gene-SO06_RS20435;Dbxref=GenBank:WP_001247336.1;Name=WP_001247336.1;Ontology_term=GO:0009297;gbkey=CDS;gene=pilP;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247331.1;locus_tag=SO06_RS20435;product=type IV pilus biogenesis protein PilP;protein_id=WP_001247336.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 15544 17097 . + . ID=gene-SO06_RS20440;Name=SO06_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20440 NZ_MYDG01000022.1 Protein Homology CDS 15544 17097 . + 0 ID=cds-WP_000362202.1;Parent=gene-SO06_RS20440;Dbxref=GenBank:WP_000362202.1;Name=WP_000362202.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362202.1;locus_tag=SO06_RS20440;product=GspE/PulE family protein;protein_id=WP_000362202.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 17110 18207 . + . ID=gene-SO06_RS20445;Name=SO06_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20445 NZ_MYDG01000022.1 Protein Homology CDS 17110 18207 . + 0 ID=cds-WP_001208805.1;Parent=gene-SO06_RS20445;Dbxref=GenBank:WP_001208805.1;Name=WP_001208805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001699973.1;locus_tag=SO06_RS20445;product=type II secretion system F family protein;protein_id=WP_001208805.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 18225 18839 . + . ID=gene-SO06_RS20450;Name=SO06_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20450 NZ_MYDG01000022.1 Protein Homology CDS 18225 18839 . + 0 ID=cds-WP_000959785.1;Parent=gene-SO06_RS20450;Dbxref=GenBank:WP_000959785.1;Name=WP_000959785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959783.1;locus_tag=SO06_RS20450;product=type 4 pilus major pilin;protein_id=WP_000959785.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 18849 19409 . + . ID=gene-SO06_RS20455;Name=SO06_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20455 NZ_MYDG01000022.1 Protein Homology CDS 18849 19409 . + 0 ID=cds-WP_000014116.1;Parent=gene-SO06_RS20455;Dbxref=GenBank:WP_000014116.1;Name=WP_000014116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774171.1;locus_tag=SO06_RS20455;product=lytic transglycosylase domain-containing protein;protein_id=WP_000014116.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 19394 20050 . + . ID=gene-SO06_RS20460;Name=SO06_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20460 NZ_MYDG01000022.1 Protein Homology CDS 19394 20050 . + 0 ID=cds-WP_001193553.1;Parent=gene-SO06_RS20460;Dbxref=GenBank:WP_001193553.1;Name=WP_001193553.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193550.1;locus_tag=SO06_RS20460;product=prepilin peptidase;protein_id=WP_001193553.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 20050 21342 . + . ID=gene-SO06_RS20465;Name=SO06_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20465 NZ_MYDG01000022.1 Protein Homology CDS 20050 21342 . + 0 ID=cds-WP_032274560.1;Parent=gene-SO06_RS20465;Dbxref=GenBank:WP_032274560.1;Name=WP_032274560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012565250.1;locus_tag=SO06_RS20465;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_032274560.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 21339 21587 . - . ID=gene-SO06_RS20470;Name=SO06_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20470 NZ_MYDG01000022.1 Protein Homology CDS 21339 21587 . - 0 ID=cds-WP_001349157.1;Parent=gene-SO06_RS20470;Dbxref=GenBank:WP_001349157.1;Name=WP_001349157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001349157.1;locus_tag=SO06_RS20470;product=hypothetical protein;protein_id=WP_001349157.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 22278 23432 . + . ID=gene-SO06_RS20485;Name=SO06_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20485 NZ_MYDG01000022.1 Protein Homology CDS 22278 23432 . + 0 ID=cds-WP_001139958.1;Parent=gene-SO06_RS20485;Dbxref=GenBank:WP_001139958.1;Name=WP_001139958.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396170.1;locus_tag=SO06_RS20485;product=tyrosine-type recombinase/integrase;protein_id=WP_001139958.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 23583 24407 . + . ID=gene-SO06_RS20490;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=SO06_RS20490 NZ_MYDG01000022.1 Protein Homology CDS 23583 24407 . + 0 ID=cds-WP_001238927.1;Parent=gene-SO06_RS20490;Dbxref=GenBank:WP_001238927.1;Name=WP_001238927.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001238927.1;locus_tag=SO06_RS20490;product=conjugal transfer protein TraE;protein_id=WP_001238927.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 24493 25695 . + . ID=gene-SO06_RS20495;Name=SO06_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20495 NZ_MYDG01000022.1 Protein Homology CDS 24493 25695 . + 0 ID=cds-WP_000976353.1;Parent=gene-SO06_RS20495;Dbxref=GenBank:WP_000976353.1;Name=WP_000976353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003557916.1;locus_tag=SO06_RS20495;product=conjugal transfer protein TraF;protein_id=WP_000976353.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 25755 26339 . + . ID=gene-SO06_RS20500;Name=SO06_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20500 NZ_MYDG01000022.1 Protein Homology CDS 25755 26339 . + 0 ID=cds-WP_000977517.1;Parent=gene-SO06_RS20500;Dbxref=GenBank:WP_000977517.1;Name=WP_000977517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542524.1;locus_tag=SO06_RS20500;product=histidine phosphatase family protein;protein_id=WP_000977517.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 26734 27192 . + . ID=gene-SO06_RS20505;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=SO06_RS20505 NZ_MYDG01000022.1 Protein Homology CDS 26734 27192 . + 0 ID=cds-WP_001079808.1;Parent=gene-SO06_RS20505;Dbxref=GenBank:WP_001079808.1;Name=WP_001079808.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079808.1;locus_tag=SO06_RS20505;product=IncI1-type conjugal transfer lipoprotein TraH;protein_id=WP_001079808.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 27189 28007 . + . ID=gene-SO06_RS20510;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=SO06_RS20510 NZ_MYDG01000022.1 Protein Homology CDS 27189 28007 . + 0 ID=cds-WP_000646097.1;Parent=gene-SO06_RS20510;Dbxref=GenBank:WP_000646097.1;Name=WP_000646097.1;gbkey=CDS;gene=traI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646098.1;locus_tag=SO06_RS20510;product=IncI1-type conjugal transfer lipoprotein TraI;protein_id=WP_000646097.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 28004 29152 . + . ID=gene-SO06_RS20515;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=SO06_RS20515 NZ_MYDG01000022.1 Protein Homology CDS 28004 29152 . + 0 ID=cds-WP_001024972.1;Parent=gene-SO06_RS20515;Dbxref=GenBank:WP_001024972.1;Name=WP_001024972.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480051.1;locus_tag=SO06_RS20515;product=plasmid transfer ATPase TraJ;protein_id=WP_001024972.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 29149 29439 . + . ID=gene-SO06_RS20520;Name=SO06_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20520 NZ_MYDG01000022.1 Protein Homology CDS 29149 29439 . + 0 ID=cds-WP_001299214.1;Parent=gene-SO06_RS20520;Dbxref=GenBank:WP_001299214.1;Name=WP_001299214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542523.1;locus_tag=SO06_RS20520;product=hypothetical protein;protein_id=WP_001299214.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 29454 30005 . + . ID=gene-SO06_RS20525;Name=SO06_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20525 NZ_MYDG01000022.1 Protein Homology CDS 29454 30005 . + 0 ID=cds-WP_000014584.1;Parent=gene-SO06_RS20525;Dbxref=GenBank:WP_000014584.1;Name=WP_000014584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001493807.1;locus_tag=SO06_RS20525;product=phospholipase D family protein;protein_id=WP_000014584.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 30095 33862 . + . ID=gene-SO06_RS20530;Name=SO06_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20530 NZ_MYDG01000022.1 Protein Homology CDS 30095 33862 . + 0 ID=cds-WP_001141535.1;Parent=gene-SO06_RS20530;Dbxref=GenBank:WP_001141535.1;Name=WP_001141535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231897.1;locus_tag=SO06_RS20530;product=LPD7 domain-containing protein;protein_id=WP_001141535.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 33880 34227 . + . ID=gene-SO06_RS20535;Name=SO06_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20535 NZ_MYDG01000022.1 Protein Homology CDS 33880 34227 . + 0 ID=cds-WP_001055900.1;Parent=gene-SO06_RS20535;Dbxref=GenBank:WP_001055900.1;Name=WP_001055900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629514.1;locus_tag=SO06_RS20535;product=conjugal transfer protein;protein_id=WP_001055900.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 34224 34916 . + . ID=gene-SO06_RS20540;Name=SO06_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20540 NZ_MYDG01000022.1 Protein Homology CDS 34224 34916 . + 0 ID=cds-WP_000138552.1;Parent=gene-SO06_RS20540;Dbxref=GenBank:WP_000138552.1;Name=WP_000138552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138553.1;locus_tag=SO06_RS20540;product=DotI/IcmL family type IV secretion protein;protein_id=WP_000138552.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 34927 35910 . + . ID=gene-SO06_RS20545;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=SO06_RS20545 NZ_MYDG01000022.1 Protein Homology CDS 34927 35910 . + 0 ID=cds-WP_001191878.1;Parent=gene-SO06_RS20545;Dbxref=GenBank:WP_001191878.1;Name=WP_001191878.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191879.1;locus_tag=SO06_RS20545;product=IncI1-type conjugal transfer protein TraN;protein_id=WP_001191878.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 35913 37202 . + . ID=gene-SO06_RS20550;Name=traO;gbkey=Gene;gene=traO;gene_biotype=protein_coding;locus_tag=SO06_RS20550 NZ_MYDG01000022.1 Protein Homology CDS 35913 37202 . + 0 ID=cds-WP_001271997.1;Parent=gene-SO06_RS20550;Dbxref=GenBank:WP_001271997.1;Name=WP_001271997.1;gbkey=CDS;gene=traO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272004.1;locus_tag=SO06_RS20550;product=conjugal transfer protein TraO;protein_id=WP_001271997.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 37202 37906 . + . ID=gene-SO06_RS20555;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=SO06_RS20555 NZ_MYDG01000022.1 Protein Homology CDS 37202 37906 . + 0 ID=cds-WP_000801920.1;Parent=gene-SO06_RS20555;Dbxref=GenBank:WP_000801920.1;Name=WP_000801920.1;gbkey=CDS;gene=traP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801920.1;locus_tag=SO06_RS20555;product=IncI1-type conjugal transfer protein TraP;protein_id=WP_000801920.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 37906 38433 . + . ID=gene-SO06_RS20560;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=SO06_RS20560 NZ_MYDG01000022.1 Protein Homology CDS 37906 38433 . + 0 ID=cds-WP_001055569.1;Parent=gene-SO06_RS20560;Dbxref=GenBank:WP_001055569.1;Name=WP_001055569.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055571.1;locus_tag=SO06_RS20560;product=conjugal transfer protein TraQ;protein_id=WP_001055569.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 38484 38888 . + . ID=gene-SO06_RS20565;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=SO06_RS20565 NZ_MYDG01000022.1 Protein Homology CDS 38484 38888 . + 0 ID=cds-WP_000086960.1;Parent=gene-SO06_RS20565;Dbxref=GenBank:WP_000086960.1;Name=WP_000086960.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000086965.1;locus_tag=SO06_RS20565;product=IncI1-type conjugal transfer protein TraR;protein_id=WP_000086960.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 38952 39140 . + . ID=gene-SO06_RS20570;Name=traS;gbkey=Gene;gene=traS;gene_biotype=protein_coding;locus_tag=SO06_RS20570 NZ_MYDG01000022.1 Protein Homology CDS 38952 39140 . + 0 ID=cds-WP_001277255.1;Parent=gene-SO06_RS20570;Dbxref=GenBank:WP_001277255.1;Name=WP_001277255.1;gbkey=CDS;gene=traS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277253.1;locus_tag=SO06_RS20570;product=putative conjugal transfer protein TraS;protein_id=WP_001277255.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 39124 39924 . + . ID=gene-SO06_RS20575;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=SO06_RS20575 NZ_MYDG01000022.1 Protein Homology CDS 39124 39924 . + 0 ID=cds-WP_001164788.1;Parent=gene-SO06_RS20575;Dbxref=GenBank:WP_001164788.1;Name=WP_001164788.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001164783.1;locus_tag=SO06_RS20575;product=IncI1-type conjugal transfer protein TraT;protein_id=WP_001164788.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 40014 43058 . + . ID=gene-SO06_RS20580;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=SO06_RS20580 NZ_MYDG01000022.1 Protein Homology CDS 40014 43058 . + 0 ID=cds-WP_001024752.1;Parent=gene-SO06_RS20580;Dbxref=GenBank:WP_001024752.1;Name=WP_001024752.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024789.1;locus_tag=SO06_RS20580;product=IncI1-type conjugal transfer protein TraU;protein_id=WP_001024752.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 43058 43672 . + . ID=gene-SO06_RS20585;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=SO06_RS20585 NZ_MYDG01000022.1 Protein Homology CDS 43058 43672 . + 0 ID=cds-WP_000337394.1;Parent=gene-SO06_RS20585;Dbxref=GenBank:WP_000337394.1;Name=WP_000337394.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000337395.1;locus_tag=SO06_RS20585;product=IncI1-type conjugal transfer protein TraV;protein_id=WP_000337394.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 43639 44841 . + . ID=gene-SO06_RS20590;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=SO06_RS20590 NZ_MYDG01000022.1 Protein Homology CDS 43639 44841 . + 0 ID=cds-WP_001189158.1;Parent=gene-SO06_RS20590;Dbxref=GenBank:WP_001189158.1;Name=WP_001189158.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001387490.1;locus_tag=SO06_RS20590;product=IncI1-type conjugal transfer protein TraW;protein_id=WP_001189158.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 44870 45454 . + . ID=gene-SO06_RS20595;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=SO06_RS20595 NZ_MYDG01000022.1 Protein Homology CDS 44870 45454 . + 0 ID=cds-WP_001037998.1;Parent=gene-SO06_RS20595;Dbxref=GenBank:WP_001037998.1;Name=WP_001037998.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001037983.1;locus_tag=SO06_RS20595;product=conjugal transfer protein TraX;protein_id=WP_001037998.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 45551 47719 . + . ID=gene-SO06_RS20600;Name=SO06_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20600 NZ_MYDG01000022.1 Protein Homology CDS 45551 47719 . + 0 ID=cds-WP_000698368.1;Parent=gene-SO06_RS20600;Dbxref=GenBank:WP_000698368.1;Name=WP_000698368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001476650.1;locus_tag=SO06_RS20600;product=DotA/TraY family protein;protein_id=WP_000698368.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 47790 48452 . + . ID=gene-SO06_RS20605;Name=excA;gbkey=Gene;gene=excA;gene_biotype=protein_coding;locus_tag=SO06_RS20605 NZ_MYDG01000022.1 Protein Homology CDS 47790 48452 . + 0 ID=cds-WP_000644794.1;Parent=gene-SO06_RS20605;Dbxref=GenBank:WP_000644794.1;Name=WP_000644794.1;gbkey=CDS;gene=excA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000653334.1;locus_tag=SO06_RS20605;product=plasmid IncI1-type surface exclusion protein ExcA;protein_id=WP_000644794.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 48524 48733 . - . ID=gene-SO06_RS20610;Name=SO06_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20610 NZ_MYDG01000022.1 Protein Homology CDS 48524 48733 . - 0 ID=cds-WP_000062603.1;Parent=gene-SO06_RS20610;Dbxref=GenBank:WP_000062603.1;Name=WP_000062603.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062602.1;locus_tag=SO06_RS20610;product=HEAT repeat domain-containing protein;protein_id=WP_000062603.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 49125 49301 . + . ID=gene-SO06_RS25305;Name=SO06_RS25305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25305 NZ_MYDG01000022.1 Protein Homology CDS 49125 49301 . + 0 ID=cds-WP_001054900.1;Parent=gene-SO06_RS25305;Dbxref=GenBank:WP_001054900.1;Name=WP_001054900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054900.1;locus_tag=SO06_RS25305;product=hypothetical protein;protein_id=WP_001054900.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 50225 50476 . + . ID=gene-SO06_RS20620;Name=SO06_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20620 NZ_MYDG01000022.1 Protein Homology CDS 50225 50476 . + 0 ID=cds-WP_001291965.1;Parent=gene-SO06_RS20620;Dbxref=GenBank:WP_001291965.1;Name=WP_001291965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291967.1;locus_tag=SO06_RS20620;product=hypothetical protein;protein_id=WP_001291965.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 50548 50700 . - . ID=gene-SO06_RS20625;Name=SO06_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20625 NZ_MYDG01000022.1 Protein Homology CDS 50548 50700 . - 0 ID=cds-WP_001303307.1;Parent=gene-SO06_RS20625;Dbxref=GenBank:WP_001303307.1;Name=WP_001303307.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001618166.1;locus_tag=SO06_RS20625;product=Hok/Gef family protein;protein_id=WP_001303307.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 50992 52200 . + . ID=gene-SO06_RS20630;Name=trbA;gbkey=Gene;gene=trbA;gene_biotype=protein_coding;locus_tag=SO06_RS20630 NZ_MYDG01000022.1 Protein Homology CDS 50992 52200 . + 0 ID=cds-WP_000121273.1;Parent=gene-SO06_RS20630;Dbxref=GenBank:WP_000121273.1;Name=WP_000121273.1;gbkey=CDS;gene=trbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000121273.1;locus_tag=SO06_RS20630;product=IncI1-type conjugal transfer protein TrbA;protein_id=WP_000121273.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 52219 53289 . + . ID=gene-SO06_RS20635;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=SO06_RS20635 NZ_MYDG01000022.1 Protein Homology CDS 52219 53289 . + 0 ID=cds-WP_000151575.1;Parent=gene-SO06_RS20635;Dbxref=GenBank:WP_000151575.1;Name=WP_000151575.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000151583.1;locus_tag=SO06_RS20635;product=IncI1-type conjugal transfer protein TrbB;protein_id=WP_000151575.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 53282 55573 . + . ID=gene-SO06_RS20640;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=SO06_RS20640 NZ_MYDG01000022.1 Protein Homology CDS 53282 55573 . + 0 ID=cds-WP_001289271.1;Parent=gene-SO06_RS20640;Dbxref=GenBank:WP_001289271.1;Name=WP_001289271.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289278.1;locus_tag=SO06_RS20640;product=F-type conjugative transfer protein TrbC;protein_id=WP_001289271.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 55610 58309 . - . ID=gene-SO06_RS20645;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=SO06_RS20645 NZ_MYDG01000022.1 Protein Homology CDS 55610 58309 . - 0 ID=cds-WP_001474686.1;Parent=gene-SO06_RS20645;Dbxref=GenBank:WP_001474686.1;Name=WP_001474686.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001387486.1;locus_tag=SO06_RS20645;product=IncI1-type relaxase NikB;protein_id=WP_001474686.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 58320 58652 . - . ID=gene-SO06_RS20650;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=SO06_RS20650 NZ_MYDG01000022.1 Protein Homology CDS 58320 58652 . - 0 ID=cds-WP_001283947.1;Parent=gene-SO06_RS20650;Dbxref=GenBank:WP_001283947.1;Name=WP_001283947.1;gbkey=CDS;gene=nikA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283947.1;locus_tag=SO06_RS20650;product=IncI1-type relaxosome accessory protein NikA;protein_id=WP_001283947.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 58886 59221 . + . ID=gene-SO06_RS20655;Name=SO06_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20655 NZ_MYDG01000022.1 Protein Homology CDS 58886 59221 . + 0 ID=cds-WP_000157086.1;Parent=gene-SO06_RS20655;Dbxref=GenBank:WP_000157086.1;Name=WP_000157086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000157082.1;locus_tag=SO06_RS20655;product=molybdopterin-guanine dinucleotide biosynthesis protein MobC;protein_id=WP_000157086.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 59307 60155 . - . ID=gene-SO06_RS20660;Name=SO06_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20660 NZ_MYDG01000022.1 Protein Homology CDS 59307 60155 . - 0 ID=cds-WP_001077027.1;Parent=gene-SO06_RS20660;Dbxref=GenBank:WP_001077027.1;Name=WP_001077027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401764.1;locus_tag=SO06_RS20660;product=DUF4942 domain-containing protein;protein_id=WP_001077027.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 60736 60987 . + . ID=gene-SO06_RS20675;Name=SO06_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20675 NZ_MYDG01000022.1 Protein Homology CDS 60736 60987 . + 0 ID=cds-WP_000148286.1;Parent=gene-SO06_RS20675;Dbxref=GenBank:WP_000148286.1;Name=WP_000148286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003980153.1;locus_tag=SO06_RS20675;product=helix-turn-helix transcriptional regulator;protein_id=WP_000148286.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 61018 61311 . - . ID=gene-SO06_RS20680;Name=SO06_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20680 NZ_MYDG01000022.1 Protein Homology CDS 61018 61311 . - 0 ID=cds-WP_077250487.1;Parent=gene-SO06_RS20680;Dbxref=GenBank:WP_077250487.1;Name=WP_077250487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014358130.1;locus_tag=SO06_RS20680;product=hypothetical protein;protein_id=WP_077250487.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 61311 62213 . - . ID=gene-SO06_RS20685;Name=SO06_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20685 NZ_MYDG01000022.1 Protein Homology CDS 61311 62213 . - 0 ID=cds-WP_000038404.1;Parent=gene-SO06_RS20685;Dbxref=GenBank:WP_000038404.1;Name=WP_000038404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=SO06_RS20685;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000038404.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 62278 62544 . - . ID=gene-SO06_RS20690;Name=SO06_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20690 NZ_MYDG01000022.1 Protein Homology CDS 62278 62544 . - 0 ID=cds-WP_001247862.1;Parent=gene-SO06_RS20690;Dbxref=GenBank:WP_001247862.1;Name=WP_001247862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247860.1;locus_tag=SO06_RS20690;product=hypothetical protein;protein_id=WP_001247862.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 62638 63072 . - . ID=gene-SO06_RS20695;Name=SO06_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20695 NZ_MYDG01000022.1 Protein Homology CDS 62638 63072 . - 0 ID=cds-WP_000218863.1;Parent=gene-SO06_RS20695;Dbxref=GenBank:WP_000218863.1;Name=WP_000218863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000218847.1;locus_tag=SO06_RS20695;product=hypothetical protein;protein_id=WP_000218863.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 63801 64301 . - . ID=gene-SO06_RS25310;Name=SO06_RS25310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25310 NZ_MYDG01000022.1 Protein Homology CDS 63801 64301 . - 0 ID=cds-WP_000117611.1;Parent=gene-SO06_RS25310;Dbxref=GenBank:WP_000117611.1;Name=WP_000117611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117633.1;locus_tag=SO06_RS25310;product=antirestriction protein ArdA;protein_id=WP_000117611.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 64748 65923 . - . ID=gene-SO06_RS20720;Name=SO06_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20720 NZ_MYDG01000022.1 Protein Homology CDS 64748 65923 . - 0 ID=cds-WP_000942657.1;Parent=gene-SO06_RS20720;Dbxref=GenBank:WP_000942657.1;Name=WP_000942657.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: protein motif:HMM:NF040570.1;locus_tag=SO06_RS20720;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_000942657.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 66053 66772 . - . ID=gene-SO06_RS20725;Name=SO06_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20725 NZ_MYDG01000022.1 Protein Homology CDS 66053 66772 . - 0 ID=cds-WP_001276260.1;Parent=gene-SO06_RS20725;Dbxref=GenBank:WP_001276260.1;Name=WP_001276260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001723065.1;locus_tag=SO06_RS20725;product=plasmid SOS inhibition protein A;protein_id=WP_001276260.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 66769 67203 . - . ID=gene-SO06_RS20730;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=SO06_RS20730 NZ_MYDG01000022.1 Protein Homology CDS 66769 67203 . - 0 ID=cds-WP_000845897.1;Parent=gene-SO06_RS20730;Dbxref=GenBank:WP_000845897.1;Name=WP_000845897.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=SO06_RS20730;product=conjugation system SOS inhibitor PsiB;protein_id=WP_000845897.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 67258 69216 . - . ID=gene-SO06_RS20735;Name=SO06_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20735 NZ_MYDG01000022.1 Protein Homology CDS 67258 69216 . - 0 ID=cds-WP_001145458.1;Parent=gene-SO06_RS20735;Dbxref=GenBank:WP_001145458.1;Name=WP_001145458.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117326.1;locus_tag=SO06_RS20735;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_001145458.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 69275 69508 . - . ID=gene-SO06_RS20740;Name=SO06_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20740 NZ_MYDG01000022.1 Protein Homology CDS 69275 69508 . - 0 ID=cds-WP_000006012.1;Parent=gene-SO06_RS20740;Dbxref=GenBank:WP_000006012.1;Name=WP_000006012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958724.1;locus_tag=SO06_RS20740;product=DUF905 family protein;protein_id=WP_000006012.1;transl_table=11 NZ_MYDG01000022.1 RefSeq gene 69566 70093 . - . ID=gene-SO06_RS20745;Name=SO06_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20745 NZ_MYDG01000022.1 Protein Homology CDS 69566 70093 . - 0 ID=cds-WP_001276116.1;Parent=gene-SO06_RS20745;Dbxref=GenBank:WP_001276116.1;Name=WP_001276116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276102.1;locus_tag=SO06_RS20745;product=single-stranded DNA-binding protein;protein_id=WP_001276116.1;transl_table=11 ##sequence-region NZ_MYDG01000023.1 1 65956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000023.1 RefSeq region 1 65956 . + . ID=NZ_MYDG01000023.1:1..65956;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000023.1 RefSeq gene 1 577 . - . ID=gene-SO06_RS20760;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=SO06_RS20760;partial=true;start_range=.,1 NZ_MYDG01000023.1 Protein Homology CDS 1 577 . - 0 ID=cds-WP_139783744.1;Parent=gene-SO06_RS20760;Dbxref=GenBank:WP_139783744.1;Name=WP_139783744.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=SO06_RS20760;partial=true;product=cell envelope integrity protein TolA;protein_id=WP_139783744.1;start_range=.,1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 642 1070 . - . ID=gene-SO06_RS20765;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=SO06_RS20765 NZ_MYDG01000023.1 Protein Homology CDS 642 1070 . - 0 ID=cds-WP_000124676.1;Parent=gene-SO06_RS20765;Dbxref=GenBank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=SO06_RS20765;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 1074 1766 . - . ID=gene-SO06_RS20770;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=SO06_RS20770 NZ_MYDG01000023.1 Protein Homology CDS 1074 1766 . - 0 ID=cds-WP_000131318.1;Parent=gene-SO06_RS20770;Dbxref=GenBank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=SO06_RS20770;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 1763 2167 . - . ID=gene-SO06_RS20775;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=SO06_RS20775 NZ_MYDG01000023.1 Protein Homology CDS 1763 2167 . - 0 ID=cds-WP_001046240.1;Parent=gene-SO06_RS20775;Dbxref=GenBank:WP_001046240.1;Name=WP_001046240.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=SO06_RS20775;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046240.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 2396 2689 . - . ID=gene-SO06_RS20780;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=SO06_RS20780 NZ_MYDG01000023.1 Protein Homology CDS 2396 2689 . - 0 ID=cds-WP_000148790.1;Parent=gene-SO06_RS20780;Dbxref=GenBank:WP_000148790.1;Name=WP_000148790.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=SO06_RS20780;product=cyd operon protein YbgE;protein_id=WP_000148790.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 2689 2802 . - . ID=gene-SO06_RS20785;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=SO06_RS20785 NZ_MYDG01000023.1 Protein Homology CDS 2689 2802 . - 0 ID=cds-WP_000270278.1;Parent=gene-SO06_RS20785;Dbxref=GenBank:WP_000270278.1;Name=WP_000270278.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=SO06_RS20785;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 2817 3956 . - . ID=gene-SO06_RS20790;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=SO06_RS20790 NZ_MYDG01000023.1 Protein Homology CDS 2817 3956 . - 0 ID=cds-WP_000568258.1;Parent=gene-SO06_RS20790;Dbxref=GenBank:WP_000568258.1;Name=WP_000568258.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=SO06_RS20790;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568258.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 3972 5540 . - . ID=gene-SO06_RS20795;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=SO06_RS20795 NZ_MYDG01000023.1 Protein Homology CDS 3972 5540 . - 0 ID=cds-WP_000884369.1;Parent=gene-SO06_RS20795;Dbxref=GenBank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=SO06_RS20795;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 7123 7992 . - . ID=gene-SO06_RS20800;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=SO06_RS20800 NZ_MYDG01000023.1 Protein Homology CDS 7123 7992 . - 0 ID=cds-WP_000114631.1;Parent=gene-SO06_RS20800;Dbxref=GenBank:WP_000114631.1;Name=WP_000114631.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=SO06_RS20800;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114631.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 7992 9158 . - . ID=gene-SO06_RS20805;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=SO06_RS20805 NZ_MYDG01000023.1 Protein Homology CDS 7992 9158 . - 0 ID=cds-WP_001048590.1;Parent=gene-SO06_RS20805;Dbxref=GenBank:WP_001048590.1;Name=WP_001048590.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=SO06_RS20805;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048590.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 9300 10508 . - . ID=gene-SO06_RS20810;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=SO06_RS20810 NZ_MYDG01000023.1 Protein Homology CDS 9300 10508 . - 0 ID=cds-WP_000099858.1;Parent=gene-SO06_RS20810;Dbxref=GenBank:WP_000099858.1;Name=WP_000099858.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=SO06_RS20810;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099858.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 10523 13324 . - . ID=gene-SO06_RS20815;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=SO06_RS20815 NZ_MYDG01000023.1 Protein Homology CDS 10523 13324 . - 0 ID=cds-WP_001181504.1;Parent=gene-SO06_RS20815;Dbxref=GenBank:WP_001181504.1;Name=WP_001181504.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=SO06_RS20815;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181504.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 13850 14566 . - . ID=gene-SO06_RS20820;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=SO06_RS20820 NZ_MYDG01000023.1 Protein Homology CDS 13850 14566 . - 0 ID=cds-WP_001537859.1;Parent=gene-SO06_RS20820;Dbxref=GenBank:WP_001537859.1;Name=WP_001537859.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=SO06_RS20820;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001537859.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 14583 16349 . - . ID=gene-SO06_RS20825;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=SO06_RS20825 NZ_MYDG01000023.1 Protein Homology CDS 14583 16349 . - 0 ID=cds-WP_000775561.1;Parent=gene-SO06_RS20825;Dbxref=GenBank:WP_000775561.1;Name=WP_000775561.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=SO06_RS20825;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775561.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 16349 16696 . - . ID=gene-SO06_RS20830;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=SO06_RS20830 NZ_MYDG01000023.1 Protein Homology CDS 16349 16696 . - 0 ID=cds-WP_000254356.1;Parent=gene-SO06_RS20830;Dbxref=GenBank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=SO06_RS20830;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 16690 17094 . - . ID=gene-SO06_RS20835;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=SO06_RS20835 NZ_MYDG01000023.1 Protein Homology CDS 16690 17094 . - 0 ID=cds-WP_000263340.1;Parent=gene-SO06_RS20835;Dbxref=GenBank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=SO06_RS20835;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 17477 17608 . + . ID=gene-SO06_RS25850;Name=SO06_RS25850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25850 NZ_MYDG01000023.1 Protein Homology CDS 17477 17608 . + 0 ID=cds-WP_418142699.1;Parent=gene-SO06_RS25850;Dbxref=GenBank:WP_418142699.1;Name=WP_418142699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.1;locus_tag=SO06_RS25850;product=hypothetical protein;protein_id=WP_418142699.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 17834 19117 . + . ID=gene-SO06_RS20850;Name=SO06_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20850 NZ_MYDG01000023.1 Protein Homology CDS 17834 19117 . + 0 ID=cds-WP_000785811.1;Parent=gene-SO06_RS20850;Dbxref=GenBank:WP_000785811.1;Name=WP_000785811.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=SO06_RS20850;product=citrate synthase;protein_id=WP_000785811.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 19254 20300 . + . ID=gene-SO06_RS20855;Name=SO06_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20855 NZ_MYDG01000023.1 Protein Homology CDS 19254 20300 . + 0 ID=cds-WP_001749106.1;Parent=gene-SO06_RS20855;Dbxref=GenBank:WP_001749106.1;Name=WP_001749106.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=SO06_RS20855;product=AbrB family transcriptional regulator;protein_id=WP_001749106.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 20355 21146 . - . ID=gene-SO06_RS20860;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=SO06_RS20860 NZ_MYDG01000023.1 Protein Homology CDS 20355 21146 . - 0 ID=cds-WP_023231355.1;Parent=gene-SO06_RS20860;Dbxref=GenBank:WP_023231355.1;Name=WP_023231355.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=SO06_RS20860;product=endonuclease VIII;protein_id=WP_023231355.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 21180 21332 . - . ID=gene-SO06_RS20865;Name=SO06_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20865 NZ_MYDG01000023.1 Protein Homology CDS 21180 21332 . - 0 ID=cds-WP_001145918.1;Parent=gene-SO06_RS20865;Dbxref=GenBank:WP_001145918.1;Name=WP_001145918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145914.1;locus_tag=SO06_RS20865;product=hypothetical protein;protein_id=WP_001145918.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 21400 23295 . - . ID=gene-SO06_RS20870;Name=SO06_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20870 NZ_MYDG01000023.1 Protein Homology CDS 21400 23295 . - 0 ID=cds-WP_077248408.1;Parent=gene-SO06_RS20870;Dbxref=GenBank:WP_077248408.1;Name=WP_077248408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459711.1;locus_tag=SO06_RS20870;product=HAD family hydrolase;protein_id=WP_077248408.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 23353 24186 . - . ID=gene-SO06_RS20875;Name=SO06_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20875 NZ_MYDG01000023.1 Protein Homology CDS 23353 24186 . - 0 ID=cds-WP_001800477.1;Parent=gene-SO06_RS20875;Dbxref=GenBank:WP_001800477.1;Name=WP_001800477.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459710.1;locus_tag=SO06_RS20875;product=glycosyltransferase family A protein;protein_id=WP_001800477.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 24379 26157 . - . ID=gene-SO06_RS20880;Name=SO06_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20880 NZ_MYDG01000023.1 Protein Homology CDS 24379 26157 . - 0 ID=cds-WP_000273746.1;Parent=gene-SO06_RS20880;Dbxref=GenBank:WP_000273746.1;Name=WP_000273746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=SO06_RS20880;product=glycosyltransferase;protein_id=WP_000273746.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 26251 26961 . - . ID=gene-SO06_RS20885;Name=SO06_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20885 NZ_MYDG01000023.1 Protein Homology CDS 26251 26961 . - 0 ID=cds-WP_000702849.1;Parent=gene-SO06_RS20885;Dbxref=GenBank:WP_000702849.1;Name=WP_000702849.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459708.1;locus_tag=SO06_RS20885;product=ABC transporter ATP-binding protein;protein_id=WP_000702849.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 26965 27735 . - . ID=gene-SO06_RS20890;Name=SO06_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20890 NZ_MYDG01000023.1 Protein Homology CDS 26965 27735 . - 0 ID=cds-WP_000998822.1;Parent=gene-SO06_RS20890;Dbxref=GenBank:WP_000998822.1;Name=WP_000998822.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459707.1;locus_tag=SO06_RS20890;product=ABC transporter permease;protein_id=WP_000998822.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 27864 28997 . - . ID=gene-SO06_RS20895;Name=SO06_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20895 NZ_MYDG01000023.1 Protein Homology CDS 27864 28997 . - 0 ID=cds-WP_000824901.1;Parent=gene-SO06_RS20895;Dbxref=GenBank:WP_000824901.1;Name=WP_000824901.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459706.1;locus_tag=SO06_RS20895;product=glycosyltransferase family 4 protein;protein_id=WP_000824901.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 29010 29906 . - . ID=gene-SO06_RS20900;Name=SO06_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20900 NZ_MYDG01000023.1 Protein Homology CDS 29010 29906 . - 0 ID=cds-WP_165381675.1;Parent=gene-SO06_RS20900;Dbxref=GenBank:WP_165381675.1;Name=WP_165381675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459705.1;locus_tag=SO06_RS20900;product=glycosyltransferase;protein_id=WP_165381675.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 29903 31054 . - . ID=gene-SO06_RS20905;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=SO06_RS20905 NZ_MYDG01000023.1 Protein Homology CDS 29903 31054 . - 0 ID=cds-WP_023231358.1;Parent=gene-SO06_RS20905;Dbxref=GenBank:WP_023231358.1;Name=WP_023231358.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459704.1;locus_tag=SO06_RS20905;product=UDP-galactopyranose mutase;protein_id=WP_023231358.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 31340 32080 . - . ID=gene-SO06_RS20910;Name=SO06_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20910 NZ_MYDG01000023.1 Protein Homology CDS 31340 32080 . - 0 ID=cds-WP_001194237.1;Parent=gene-SO06_RS20910;Dbxref=GenBank:WP_001194237.1;Name=WP_001194237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459703.1;locus_tag=SO06_RS20910;product=hypothetical protein;protein_id=WP_001194237.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 32082 32417 . - . ID=gene-SO06_RS20915;Name=SO06_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20915 NZ_MYDG01000023.1 Protein Homology CDS 32082 32417 . - 0 ID=cds-WP_001182680.1;Parent=gene-SO06_RS20915;Dbxref=GenBank:WP_001182680.1;Name=WP_001182680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459702.1;locus_tag=SO06_RS20915;product=hypothetical protein;protein_id=WP_001182680.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 32877 33443 . - . ID=gene-SO06_RS20920;Name=SO06_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20920 NZ_MYDG01000023.1 Protein Homology CDS 32877 33443 . - 0 ID=cds-WP_000824704.1;Parent=gene-SO06_RS20920;Dbxref=GenBank:WP_000824704.1;Name=WP_000824704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459701.1;locus_tag=SO06_RS20920;product=tyrosine-type DNA invertase;protein_id=WP_000824704.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 33503 33634 . - . ID=gene-SO06_RS20925;Name=SO06_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20925 NZ_MYDG01000023.1 Protein Homology CDS 33503 33634 . - 0 ID=cds-WP_001521652.1;Parent=gene-SO06_RS20925;Dbxref=GenBank:WP_001521652.1;Name=WP_001521652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459700.1;locus_tag=SO06_RS20925;product=hypothetical protein;protein_id=WP_001521652.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 33958 34692 . - . ID=gene-SO06_RS20930;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=SO06_RS20930 NZ_MYDG01000023.1 Protein Homology CDS 33958 34692 . - 0 ID=cds-WP_001017922.1;Parent=gene-SO06_RS20930;Dbxref=GenBank:WP_001017922.1;Name=WP_001017922.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=SO06_RS20930;product=5-oxoprolinase subunit PxpA;protein_id=WP_001017922.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 34682 35614 . - . ID=gene-SO06_RS20935;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=SO06_RS20935 NZ_MYDG01000023.1 Protein Homology CDS 34682 35614 . - 0 ID=cds-WP_023231359.1;Parent=gene-SO06_RS20935;Dbxref=GenBank:WP_023231359.1;Name=WP_023231359.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=SO06_RS20935;product=5-oxoprolinase subunit PxpC;protein_id=WP_023231359.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 35608 36264 . - . ID=gene-SO06_RS20940;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=SO06_RS20940 NZ_MYDG01000023.1 Protein Homology CDS 35608 36264 . - 0 ID=cds-WP_001188371.1;Parent=gene-SO06_RS20940;Dbxref=GenBank:WP_001188371.1;Name=WP_001188371.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=SO06_RS20940;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188371.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 36280 37023 . - . ID=gene-SO06_RS20945;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=SO06_RS20945 NZ_MYDG01000023.1 Protein Homology CDS 36280 37023 . - 0 ID=cds-WP_000798855.1;Parent=gene-SO06_RS20945;Dbxref=GenBank:WP_000798855.1;Name=WP_000798855.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=SO06_RS20945;product=radiation resistance protein YbgI;protein_id=WP_000798855.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 37352 38833 . + . ID=gene-SO06_RS20955;Name=SO06_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20955 NZ_MYDG01000023.1 Protein Homology CDS 37352 38833 . + 0 ID=cds-WP_023231360.1;Parent=gene-SO06_RS20955;Dbxref=GenBank:WP_023231360.1;Name=WP_023231360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=SO06_RS20955;product=MFS transporter;protein_id=WP_023231360.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 38872 40293 . - . ID=gene-SO06_RS20960;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=SO06_RS20960 NZ_MYDG01000023.1 Protein Homology CDS 38872 40293 . - 0 ID=cds-WP_001142011.1;Parent=gene-SO06_RS20960;Dbxref=GenBank:WP_001142011.1;Name=WP_001142011.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=SO06_RS20960;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_001142011.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 40404 40610 . - . ID=gene-SO06_RS20965;Name=SO06_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS20965 NZ_MYDG01000023.1 Protein Homology CDS 40404 40610 . - 0 ID=cds-WP_000401437.1;Parent=gene-SO06_RS20965;Dbxref=GenBank:WP_000401437.1;Name=WP_000401437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=SO06_RS20965;product=YbfA family protein;protein_id=WP_000401437.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 40947 41036 . + . ID=gene-SO06_RS20970;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=SO06_RS20970 NZ_MYDG01000023.1 Protein Homology CDS 40947 41036 . + 0 ID=cds-WP_001670793.1;Parent=gene-SO06_RS20970;Dbxref=GenBank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=SO06_RS20970;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 41036 42715 . + . ID=gene-SO06_RS20975;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=SO06_RS20975 NZ_MYDG01000023.1 Protein Homology CDS 41036 42715 . + 0 ID=cds-WP_000730078.1;Parent=gene-SO06_RS20975;Dbxref=GenBank:WP_000730078.1;Name=WP_000730078.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=SO06_RS20975;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000730078.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 42736 44784 . + . ID=gene-SO06_RS20980;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=SO06_RS20980 NZ_MYDG01000023.1 Protein Homology CDS 42736 44784 . + 0 ID=cds-WP_023231362.1;Parent=gene-SO06_RS20980;Dbxref=GenBank:WP_023231362.1;Name=WP_023231362.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=SO06_RS20980;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_023231362.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 44793 45377 . + . ID=gene-SO06_RS20985;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=SO06_RS20985 NZ_MYDG01000023.1 Protein Homology CDS 44793 45377 . + 0 ID=cds-WP_000579804.1;Parent=gene-SO06_RS20985;Dbxref=GenBank:WP_000579804.1;Name=WP_000579804.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=SO06_RS20985;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_000579804.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 45374 48058 . + . ID=gene-SO06_RS20990;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=SO06_RS20990 NZ_MYDG01000023.1 Protein Homology CDS 45374 48058 . + 0 ID=cds-WP_023231363.1;Parent=gene-SO06_RS20990;Dbxref=GenBank:WP_023231363.1;Name=WP_023231363.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=SO06_RS20990;product=two-component system sensor histidine kinase KdpD;protein_id=WP_023231363.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 48055 48732 . + . ID=gene-SO06_RS20995;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=SO06_RS20995 NZ_MYDG01000023.1 Protein Homology CDS 48055 48732 . + 0 ID=cds-WP_000186053.1;Parent=gene-SO06_RS20995;Dbxref=GenBank:WP_000186053.1;Name=WP_000186053.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=SO06_RS20995;product=two-component system response regulator KdpE;protein_id=WP_000186053.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 49010 49114 . + . ID=gene-SO06_RS25160;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=SO06_RS25160 NZ_MYDG01000023.1 Protein Homology CDS 49010 49114 . + 0 ID=cds-WP_015632840.1;Parent=gene-SO06_RS25160;Dbxref=GenBank:WP_015632840.1;Name=WP_015632840.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=SO06_RS25160;product=leader peptide SpeFL;protein_id=WP_015632840.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 49494 51692 . + . ID=gene-SO06_RS21000;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=SO06_RS21000 NZ_MYDG01000023.1 Protein Homology CDS 49494 51692 . + 0 ID=cds-WP_001292402.1;Parent=gene-SO06_RS21000;Dbxref=GenBank:WP_001292402.1;Name=WP_001292402.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=SO06_RS21000;product=ornithine decarboxylase SpeF;protein_id=WP_001292402.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 51689 53008 . + . ID=gene-SO06_RS21005;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=SO06_RS21005 NZ_MYDG01000023.1 Protein Homology CDS 51689 53008 . + 0 ID=cds-WP_000042658.1;Parent=gene-SO06_RS21005;Dbxref=GenBank:WP_000042658.1;Name=WP_000042658.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=SO06_RS21005;product=putrescine-ornithine antiporter;protein_id=WP_000042658.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 53073 53558 . + . ID=gene-SO06_RS21010;Name=SO06_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21010 NZ_MYDG01000023.1 Protein Homology CDS 53073 53558 . + 0 ID=cds-WP_000070053.1;Parent=gene-SO06_RS21010;Dbxref=GenBank:WP_000070053.1;Name=WP_000070053.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=SO06_RS21010;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000070053.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 53673 55313 . - . ID=gene-SO06_RS21015;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=SO06_RS21015 NZ_MYDG01000023.1 Protein Homology CDS 53673 55313 . - 0 ID=cds-WP_000974385.1;Parent=gene-SO06_RS21015;Dbxref=GenBank:WP_000974385.1;Name=WP_000974385.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=SO06_RS21015;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974385.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 55338 55880 . - . ID=gene-SO06_RS25165;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=SO06_RS25165 NZ_MYDG01000023.1 Protein Homology CDS 55338 55880 . - 0 ID=cds-WP_000848395.1;Parent=gene-SO06_RS25165;Dbxref=GenBank:WP_000848395.1;Name=WP_000848395.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=SO06_RS25165;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 56065 56835 . + . ID=gene-SO06_RS21020;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=SO06_RS21020 NZ_MYDG01000023.1 Protein Homology CDS 56065 56835 . + 0 ID=cds-WP_000773245.1;Parent=gene-SO06_RS21020;Dbxref=GenBank:WP_000773245.1;Name=WP_000773245.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=SO06_RS21020;product=esterase;protein_id=WP_000773245.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 56969 57262 . + . ID=gene-SO06_RS21025;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=SO06_RS21025 NZ_MYDG01000023.1 Protein Homology CDS 56969 57262 . + 0 ID=cds-WP_023231365.1;Parent=gene-SO06_RS21025;Dbxref=GenBank:WP_023231365.1;Name=WP_023231365.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=SO06_RS21025;product=LexA regulated protein;protein_id=WP_023231365.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 57413 57943 . + . ID=gene-SO06_RS21030;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=SO06_RS21030 NZ_MYDG01000023.1 Protein Homology CDS 57413 57943 . + 0 ID=cds-WP_001018621.1;Parent=gene-SO06_RS21030;Dbxref=GenBank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=SO06_RS21030;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11 NZ_MYDG01000023.1 RefSeq pseudogene 58147 58232 . + . ID=gene-SO06_RS25400;Name=SO06_RS25400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25400;pseudo=true NZ_MYDG01000023.1 Protein Homology CDS 58147 58232 . + 0 ID=cds-SO06_RS25400;Parent=gene-SO06_RS25400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=SO06_RS25400;product=fur leader peptide;pseudo=true;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 58225 58677 . + . ID=gene-SO06_RS21035;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=SO06_RS21035 NZ_MYDG01000023.1 Protein Homology CDS 58225 58677 . + 0 ID=cds-WP_000131699.1;Parent=gene-SO06_RS21035;Dbxref=GenBank:WP_000131699.1;Name=WP_000131699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=SO06_RS21035;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 58792 59718 . + . ID=gene-SO06_RS21040;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=SO06_RS21040 NZ_MYDG01000023.1 Protein Homology CDS 58792 59718 . + 0 ID=cds-WP_000423371.1;Parent=gene-SO06_RS21040;Dbxref=GenBank:WP_000423371.1;Name=WP_000423371.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=SO06_RS21040;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423371.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 59816 61219 . + . ID=gene-SO06_RS21045;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=SO06_RS21045 NZ_MYDG01000023.1 Protein Homology CDS 59816 61219 . + 0 ID=cds-WP_000228705.1;Parent=gene-SO06_RS21045;Dbxref=GenBank:WP_000228705.1;Name=WP_000228705.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=SO06_RS21045;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_000228705.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 61206 62345 . + . ID=gene-SO06_RS21050;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=SO06_RS21050 NZ_MYDG01000023.1 Protein Homology CDS 61206 62345 . + 0 ID=cds-WP_000811134.1;Parent=gene-SO06_RS21050;Dbxref=GenBank:WP_000811134.1;Name=WP_000811134.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=SO06_RS21050;product=tricarballylate utilization protein TcuB;protein_id=WP_000811134.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 62396 63700 . + . ID=gene-SO06_RS21055;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=SO06_RS21055 NZ_MYDG01000023.1 Protein Homology CDS 62396 63700 . + 0 ID=cds-WP_000057014.1;Parent=gene-SO06_RS21055;Dbxref=GenBank:WP_000057014.1;Name=WP_000057014.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=SO06_RS21055;product=tricarballylate/proton symporter TcuC;protein_id=WP_000057014.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 63749 64081 . - . ID=gene-SO06_RS21060;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=SO06_RS21060 NZ_MYDG01000023.1 Protein Homology CDS 63749 64081 . - 0 ID=cds-WP_000722260.1;Parent=gene-SO06_RS21060;Dbxref=GenBank:WP_000722260.1;Name=WP_000722260.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=SO06_RS21060;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722260.1;transl_table=11 NZ_MYDG01000023.1 RefSeq gene 64131 65537 . - . ID=gene-SO06_RS21065;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=SO06_RS21065 NZ_MYDG01000023.1 Protein Homology CDS 64131 65537 . - 0 ID=cds-WP_001258803.1;Parent=gene-SO06_RS21065;Dbxref=GenBank:WP_001258803.1;Name=WP_001258803.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=SO06_RS21065;product=chitoporin ChiP;protein_id=WP_001258803.1;transl_table=11 ##sequence-region NZ_MYDG01000024.1 1 59746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000024.1 RefSeq region 1 59746 . + . ID=NZ_MYDG01000024.1:1..59746;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000024.1 RefSeq gene 138 872 . - . ID=gene-SO06_RS21075;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=SO06_RS21075 NZ_MYDG01000024.1 Protein Homology CDS 138 872 . - 0 ID=cds-WP_000080390.1;Parent=gene-SO06_RS21075;Dbxref=GenBank:WP_000080390.1;Name=WP_000080390.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=SO06_RS21075;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000080390.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 948 2660 . - . ID=gene-SO06_RS21085;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=SO06_RS21085 NZ_MYDG01000024.1 Protein Homology CDS 948 2660 . - 0 ID=cds-WP_023232701.1;Parent=gene-SO06_RS21085;Dbxref=GenBank:WP_023232701.1;Name=WP_023232701.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=SO06_RS21085;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_023232701.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 2660 4459 . - . ID=gene-SO06_RS21090;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=SO06_RS21090 NZ_MYDG01000024.1 Protein Homology CDS 2660 4459 . - 0 ID=cds-WP_023232700.1;Parent=gene-SO06_RS21090;Dbxref=GenBank:WP_023232700.1;Name=WP_023232700.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=SO06_RS21090;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_023232700.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 4883 5245 . + . ID=gene-SO06_RS21100;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=SO06_RS21100 NZ_MYDG01000024.1 Protein Homology CDS 4883 5245 . + 0 ID=cds-WP_000108313.1;Parent=gene-SO06_RS21100;Dbxref=GenBank:WP_000108313.1;Name=WP_000108313.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=SO06_RS21100;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108313.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 5335 6132 . - . ID=gene-SO06_RS21105;Name=SO06_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21105 NZ_MYDG01000024.1 Protein Homology CDS 5335 6132 . - 0 ID=cds-WP_023232699.1;Parent=gene-SO06_RS21105;Dbxref=GenBank:WP_023232699.1;Name=WP_023232699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=SO06_RS21105;product=MBL fold metallo-hydrolase;protein_id=WP_023232699.1;transl_table=11 NZ_MYDG01000024.1 RefSeq direct_repeat 6291 7234 . + . ID=id-NZ_MYDG01000024.1:6291..7234;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=6291..6319;rpt_unit_seq=cggtttatccccgctggcgcggggaacac NZ_MYDG01000024.1 RefSeq gene 7531 8202 . - . ID=gene-SO06_RS21110;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=SO06_RS21110 NZ_MYDG01000024.1 Protein Homology CDS 7531 8202 . - 0 ID=cds-WP_001199961.1;Parent=gene-SO06_RS21110;Dbxref=GenBank:WP_001199961.1;Name=WP_001199961.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=SO06_RS21110;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199961.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 8338 9636 . - . ID=gene-SO06_RS21115;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=SO06_RS21115 NZ_MYDG01000024.1 Protein Homology CDS 8338 9636 . - 0 ID=cds-WP_000036734.1;Parent=gene-SO06_RS21115;Dbxref=GenBank:WP_000036734.1;Name=WP_000036734.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=SO06_RS21115;product=phosphopyruvate hydratase;protein_id=WP_000036734.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 9719 11356 . - . ID=gene-SO06_RS21120;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=SO06_RS21120 NZ_MYDG01000024.1 Protein Homology CDS 9719 11356 . - 0 ID=cds-WP_000210863.1;Parent=gene-SO06_RS21120;Dbxref=GenBank:WP_000210863.1;Name=WP_000210863.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=SO06_RS21120;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210863.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 11584 12384 . - . ID=gene-SO06_RS21125;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=SO06_RS21125 NZ_MYDG01000024.1 Protein Homology CDS 11584 12384 . - 0 ID=cds-WP_000210454.1;Parent=gene-SO06_RS21125;Dbxref=GenBank:WP_000210454.1;Name=WP_000210454.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=SO06_RS21125;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_000210454.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 12991 13578 . + . ID=gene-SO06_RS21130;Name=SO06_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21130 NZ_MYDG01000024.1 Protein Homology CDS 12991 13578 . + 0 ID=cds-WP_000842511.1;Parent=gene-SO06_RS21130;Dbxref=GenBank:WP_000842511.1;Name=WP_000842511.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=SO06_RS21130;product=fimbrial protein;protein_id=WP_000842511.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 13661 16357 . + . ID=gene-SO06_RS21135;Name=SO06_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21135 NZ_MYDG01000024.1 Protein Homology CDS 13661 16357 . + 0 ID=cds-WP_071786864.1;Parent=gene-SO06_RS21135;Dbxref=GenBank:WP_071786864.1;Name=WP_071786864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981797.1;locus_tag=SO06_RS21135;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_071786864.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 16370 17143 . + . ID=gene-SO06_RS21140;Name=SO06_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21140 NZ_MYDG01000024.1 Protein Homology CDS 16370 17143 . + 0 ID=cds-WP_001044459.1;Parent=gene-SO06_RS21140;Dbxref=GenBank:WP_001044459.1;Name=WP_001044459.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=SO06_RS21140;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001044459.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 17163 17669 . + . ID=gene-SO06_RS21145;Name=SO06_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21145 NZ_MYDG01000024.1 Protein Homology CDS 17163 17669 . + 0 ID=cds-WP_023232696.1;Parent=gene-SO06_RS21145;Dbxref=GenBank:WP_023232696.1;Name=WP_023232696.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=SO06_RS21145;product=fimbrial protein;protein_id=WP_023232696.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 17684 18154 . + . ID=gene-SO06_RS21150;Name=SO06_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21150 NZ_MYDG01000024.1 Protein Homology CDS 17684 18154 . + 0 ID=cds-WP_000832396.1;Parent=gene-SO06_RS21150;Dbxref=GenBank:WP_000832396.1;Name=WP_000832396.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=SO06_RS21150;product=fimbrial protein;protein_id=WP_000832396.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 18151 18687 . + . ID=gene-SO06_RS21155;Name=SO06_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21155 NZ_MYDG01000024.1 Protein Homology CDS 18151 18687 . + 0 ID=cds-WP_023232695.1;Parent=gene-SO06_RS21155;Dbxref=GenBank:WP_023232695.1;Name=WP_023232695.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=SO06_RS21155;product=fimbrial protein;protein_id=WP_023232695.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 18716 19801 . + . ID=gene-SO06_RS21160;Name=SO06_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21160 NZ_MYDG01000024.1 Protein Homology CDS 18716 19801 . + 0 ID=cds-WP_023232694.1;Parent=gene-SO06_RS21160;Dbxref=GenBank:WP_023232694.1;Name=WP_023232694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188944.1;locus_tag=SO06_RS21160;product=hypothetical protein;protein_id=WP_023232694.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 19813 20862 . + . ID=gene-SO06_RS21165;Name=SO06_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21165 NZ_MYDG01000024.1 Protein Homology CDS 19813 20862 . + 0 ID=cds-WP_071786863.1;Parent=gene-SO06_RS21165;Dbxref=GenBank:WP_071786863.1;Name=WP_071786863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662924.1;locus_tag=SO06_RS21165;product=hypothetical protein;protein_id=WP_071786863.1;transl_table=11 NZ_MYDG01000024.1 RefSeq pseudogene 20982 21101 . - . ID=gene-SO06_RS21170;Name=SO06_RS21170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS21170;partial=true;pseudo=true;start_range=.,20982 NZ_MYDG01000024.1 Protein Homology CDS 20982 21101 . - 0 ID=cds-SO06_RS21170;Parent=gene-SO06_RS21170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=SO06_RS21170;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;start_range=.,20982;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 21067 21423 . - . ID=gene-SO06_RS21175;Name=SO06_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21175 NZ_MYDG01000024.1 Protein Homology CDS 21067 21423 . - 0 ID=cds-WP_000480218.1;Parent=gene-SO06_RS21175;Dbxref=GenBank:WP_000480218.1;Name=WP_000480218.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=SO06_RS21175;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_000480218.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 21507 23741 . - . ID=gene-SO06_RS21180;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=SO06_RS21180 NZ_MYDG01000024.1 Protein Homology CDS 21507 23741 . - 0 ID=cds-WP_000226841.1;Parent=gene-SO06_RS21180;Dbxref=GenBank:WP_000226841.1;Name=WP_000226841.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=SO06_RS21180;product=GTP diphosphokinase;protein_id=WP_000226841.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 23793 25088 . - . ID=gene-SO06_RS21185;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=SO06_RS21185 NZ_MYDG01000024.1 Protein Homology CDS 23793 25088 . - 0 ID=cds-WP_023232692.1;Parent=gene-SO06_RS21185;Dbxref=GenBank:WP_023232692.1;Name=WP_023232692.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=SO06_RS21185;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_023232692.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 25146 27902 . + . ID=gene-SO06_RS21190;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=SO06_RS21190 NZ_MYDG01000024.1 Protein Homology CDS 25146 27902 . + 0 ID=cds-WP_000186399.1;Parent=gene-SO06_RS21190;Dbxref=GenBank:WP_000186399.1;Name=WP_000186399.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=SO06_RS21190;product=two-component sensor histidine kinase BarA;protein_id=WP_000186399.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 27946 29088 . - . ID=gene-SO06_RS21195;Name=SO06_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21195 NZ_MYDG01000024.1 Protein Homology CDS 27946 29088 . - 0 ID=cds-WP_000706477.1;Parent=gene-SO06_RS21195;Dbxref=GenBank:WP_000706477.1;Name=WP_000706477.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=SO06_RS21195;product=glycerate kinase;protein_id=WP_000706477.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 29166 30506 . - . ID=gene-SO06_RS21200;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=SO06_RS21200 NZ_MYDG01000024.1 Protein Homology CDS 29166 30506 . - 0 ID=cds-WP_000107113.1;Parent=gene-SO06_RS21200;Dbxref=GenBank:WP_000107113.1;Name=WP_000107113.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=SO06_RS21200;product=glucarate dehydratase;protein_id=WP_000107113.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 30527 31867 . - . ID=gene-SO06_RS21205;Name=SO06_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21205 NZ_MYDG01000024.1 Protein Homology CDS 30527 31867 . - 0 ID=cds-WP_000211801.1;Parent=gene-SO06_RS21205;Dbxref=GenBank:WP_000211801.1;Name=WP_000211801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=SO06_RS21205;product=enolase C-terminal domain-like protein;protein_id=WP_000211801.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 31864 33222 . - . ID=gene-SO06_RS21210;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=SO06_RS21210 NZ_MYDG01000024.1 Protein Homology CDS 31864 33222 . - 0 ID=cds-WP_000097015.1;Parent=gene-SO06_RS21210;Dbxref=GenBank:WP_000097015.1;Name=WP_000097015.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=SO06_RS21210;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097015.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 33305 33553 . + . ID=gene-SO06_RS21215;Name=SO06_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21215 NZ_MYDG01000024.1 GeneMarkS-2+ CDS 33305 33553 . + 0 ID=cds-WP_001531815.1;Parent=gene-SO06_RS21215;Dbxref=GenBank:WP_001531815.1;Name=WP_001531815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS21215;product=hypothetical protein;protein_id=WP_001531815.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 33703 34152 . - . ID=gene-SO06_RS21220;Name=SO06_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21220 NZ_MYDG01000024.1 Protein Homology CDS 33703 34152 . - 0 ID=cds-WP_000807739.1;Parent=gene-SO06_RS21220;Dbxref=GenBank:WP_000807739.1;Name=WP_000807739.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=SO06_RS21220;product=flavodoxin;protein_id=WP_000807739.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 34171 34953 . - . ID=gene-SO06_RS21225;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=SO06_RS21225 NZ_MYDG01000024.1 Protein Homology CDS 34171 34953 . - 0 ID=cds-WP_000890028.1;Parent=gene-SO06_RS21225;Dbxref=GenBank:WP_000890028.1;Name=WP_000890028.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=SO06_RS21225;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890028.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 34953 35282 . - . ID=gene-SO06_RS21230;Name=SO06_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21230 NZ_MYDG01000024.1 Protein Homology CDS 34953 35282 . - 0 ID=cds-WP_000207015.1;Parent=gene-SO06_RS21230;Dbxref=GenBank:WP_000207015.1;Name=WP_000207015.1;Ontology_term=GO:0044010;gbkey=CDS;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=SO06_RS21230;product=YqcC family protein;protein_id=WP_000207015.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 35894 36439 . - . ID=gene-SO06_RS21240;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=SO06_RS21240 NZ_MYDG01000024.1 Protein Homology CDS 35894 36439 . - 0 ID=cds-WP_000343990.1;Parent=gene-SO06_RS21240;Dbxref=GenBank:WP_000343990.1;Name=WP_000343990.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=SO06_RS21240;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 36508 37356 . + . ID=gene-SO06_RS21245;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=SO06_RS21245 NZ_MYDG01000024.1 Protein Homology CDS 36508 37356 . + 0 ID=cds-WP_000100463.1;Parent=gene-SO06_RS21245;Dbxref=GenBank:WP_000100463.1;Name=WP_000100463.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=SO06_RS21245;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100463.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 37469 38833 . + . ID=gene-SO06_RS21250;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=SO06_RS21250 NZ_MYDG01000024.1 Protein Homology CDS 37469 38833 . + 0 ID=cds-WP_000627973.1;Parent=gene-SO06_RS21250;Dbxref=GenBank:WP_000627973.1;Name=WP_000627973.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=SO06_RS21250;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627973.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 39398 40687 . + . ID=gene-SO06_RS21255;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=SO06_RS21255 NZ_MYDG01000024.1 Protein Homology CDS 39398 40687 . + 0 ID=cds-WP_000450462.1;Parent=gene-SO06_RS21255;Dbxref=GenBank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=SO06_RS21255;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450462.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 40746 42113 . + . ID=gene-SO06_RS21260;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=SO06_RS21260 NZ_MYDG01000024.1 Protein Homology CDS 40746 42113 . + 0 ID=cds-WP_000626384.1;Parent=gene-SO06_RS21260;Dbxref=GenBank:WP_000626384.1;Name=WP_000626384.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=SO06_RS21260;product=L-serine ammonia-lyase II;protein_id=WP_000626384.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 42284 43039 . + . ID=gene-SO06_RS21270;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=SO06_RS21270 NZ_MYDG01000024.1 Protein Homology CDS 42284 43039 . + 0 ID=cds-WP_001519360.1;Parent=gene-SO06_RS21270;Dbxref=GenBank:WP_001519360.1;Name=WP_001519360.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=SO06_RS21270;product=flap endonuclease Xni;protein_id=WP_001519360.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 43131 44279 . - . ID=gene-SO06_RS21275;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=SO06_RS21275 NZ_MYDG01000024.1 Protein Homology CDS 43131 44279 . - 0 ID=cds-WP_023232691.1;Parent=gene-SO06_RS21275;Dbxref=GenBank:WP_023232691.1;Name=WP_023232691.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=SO06_RS21275;product=lactaldehyde reductase;protein_id=WP_023232691.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 44296 44943 . - . ID=gene-SO06_RS21280;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=SO06_RS21280 NZ_MYDG01000024.1 Protein Homology CDS 44296 44943 . - 0 ID=cds-WP_000440819.1;Parent=gene-SO06_RS21280;Dbxref=GenBank:WP_000440819.1;Name=WP_000440819.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=SO06_RS21280;product=L-fuculose-phosphate aldolase;protein_id=WP_000440819.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 45500 46816 . + . ID=gene-SO06_RS21285;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=SO06_RS21285 NZ_MYDG01000024.1 Protein Homology CDS 45500 46816 . + 0 ID=cds-WP_000528622.1;Parent=gene-SO06_RS21285;Dbxref=GenBank:WP_000528622.1;Name=WP_000528622.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=SO06_RS21285;product=L-fucose:H+ symporter permease;protein_id=WP_000528622.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 46848 48623 . + . ID=gene-SO06_RS21290;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=SO06_RS21290 NZ_MYDG01000024.1 Protein Homology CDS 46848 48623 . + 0 ID=cds-WP_000724126.1;Parent=gene-SO06_RS21290;Dbxref=GenBank:WP_000724126.1;Name=WP_000724126.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=SO06_RS21290;product=L-fucose isomerase;protein_id=WP_000724126.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 48724 50142 . + . ID=gene-SO06_RS21295;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=SO06_RS21295 NZ_MYDG01000024.1 Protein Homology CDS 48724 50142 . + 0 ID=cds-WP_048348957.1;Parent=gene-SO06_RS21295;Dbxref=GenBank:WP_048348957.1;Name=WP_048348957.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=SO06_RS21295;product=L-fuculokinase;protein_id=WP_048348957.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 50144 50566 . + . ID=gene-SO06_RS21300;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=SO06_RS21300 NZ_MYDG01000024.1 Protein Homology CDS 50144 50566 . + 0 ID=cds-WP_000920848.1;Parent=gene-SO06_RS21300;Dbxref=GenBank:WP_000920848.1;Name=WP_000920848.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=SO06_RS21300;product=L-fucose mutarotase;protein_id=WP_000920848.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 50624 51334 . + . ID=gene-SO06_RS21305;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=SO06_RS21305 NZ_MYDG01000024.1 Protein Homology CDS 50624 51334 . + 0 ID=cds-WP_000642331.1;Parent=gene-SO06_RS21305;Dbxref=GenBank:WP_000642331.1;Name=WP_000642331.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=SO06_RS21305;product=L-fucose operon activator;protein_id=WP_000642331.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 51381 52481 . - . ID=gene-SO06_RS21310;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=SO06_RS21310 NZ_MYDG01000024.1 Protein Homology CDS 51381 52481 . - 0 ID=cds-WP_023232687.1;Parent=gene-SO06_RS21310;Dbxref=GenBank:WP_023232687.1;Name=WP_023232687.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=SO06_RS21310;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_023232687.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 52474 52869 . - . ID=gene-SO06_RS21315;Name=SO06_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21315 NZ_MYDG01000024.1 Protein Homology CDS 52474 52869 . - 0 ID=cds-WP_000203913.1;Parent=gene-SO06_RS21315;Dbxref=GenBank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=SO06_RS21315;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 52888 53805 . - . ID=gene-SO06_RS21320;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=SO06_RS21320 NZ_MYDG01000024.1 Protein Homology CDS 52888 53805 . - 0 ID=cds-WP_000044409.1;Parent=gene-SO06_RS21320;Dbxref=GenBank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=SO06_RS21320;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 54152 54379 . - . ID=gene-SO06_RS21325;Name=SO06_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21325 NZ_MYDG01000024.1 Protein Homology CDS 54152 54379 . - 0 ID=cds-WP_000750393.1;Parent=gene-SO06_RS21325;Dbxref=GenBank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=SO06_RS21325;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 54572 55777 . + . ID=gene-SO06_RS21330;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=SO06_RS21330 NZ_MYDG01000024.1 Protein Homology CDS 54572 55777 . + 0 ID=cds-WP_000991059.1;Parent=gene-SO06_RS21330;Dbxref=GenBank:WP_000991059.1;Name=WP_000991059.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=SO06_RS21330;product=cysteine desulfurase CsdA;protein_id=WP_000991059.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 55777 56220 . + . ID=gene-SO06_RS21335;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=SO06_RS21335 NZ_MYDG01000024.1 Protein Homology CDS 55777 56220 . + 0 ID=cds-WP_000184198.1;Parent=gene-SO06_RS21335;Dbxref=GenBank:WP_000184198.1;Name=WP_000184198.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=SO06_RS21335;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184198.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 56520 57407 . + . ID=gene-SO06_RS21340;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=SO06_RS21340 NZ_MYDG01000024.1 Protein Homology CDS 56520 57407 . + 0 ID=cds-WP_077248417.1;Parent=gene-SO06_RS21340;Dbxref=GenBank:WP_077248417.1;Name=WP_077248417.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=SO06_RS21340;product=EamA family transporter RarD;protein_id=WP_077248417.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 57459 58265 . - . ID=gene-SO06_RS21345;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=SO06_RS21345 NZ_MYDG01000024.1 Protein Homology CDS 57459 58265 . - 0 ID=cds-WP_000117748.1;Parent=gene-SO06_RS21345;Dbxref=GenBank:WP_000117748.1;Name=WP_000117748.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=SO06_RS21345;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117748.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 58375 59472 . - . ID=gene-SO06_RS21350;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=SO06_RS21350 NZ_MYDG01000024.1 Protein Homology CDS 58375 59472 . - 0 ID=cds-WP_000678626.1;Parent=gene-SO06_RS21350;Dbxref=GenBank:WP_000678626.1;Name=WP_000678626.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=SO06_RS21350;product=murein transglycosylase A;protein_id=WP_000678626.1;transl_table=11 NZ_MYDG01000024.1 RefSeq gene 59688 59746 . + . ID=gene-SO06_RS21355;Name=SO06_RS21355;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS21355 NZ_MYDG01000024.1 tRNAscan-SE tRNA 59688 59746 . + . ID=rna-SO06_RS21355;Parent=gene-SO06_RS21355;anticodon=(pos:59714..59716);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS21355;product=tRNA-Met NZ_MYDG01000024.1 tRNAscan-SE exon 59688 59746 . + . ID=exon-SO06_RS21355-1;Parent=rna-SO06_RS21355;anticodon=(pos:59714..59716);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS21355;product=tRNA-Met ##sequence-region NZ_MYDG01000025.1 1 58957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000025.1 RefSeq region 1 58957 . + . ID=NZ_MYDG01000025.1:1..58957;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000025.1 RefSeq gene 1 308 . + . ID=gene-SO06_RS21360;Name=SO06_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21360;partial=true;start_range=.,1 NZ_MYDG01000025.1 Protein Homology CDS 1 308 . + 2 ID=cds-WP_023236344.1;Parent=gene-SO06_RS21360;Dbxref=GenBank:WP_023236344.1;Name=WP_023236344.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=SO06_RS21360;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_023236344.1;start_range=.,1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 427 1125 . + . ID=gene-SO06_RS21365;Name=SO06_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21365 NZ_MYDG01000025.1 Protein Homology CDS 427 1125 . + 0 ID=cds-WP_001005988.1;Parent=gene-SO06_RS21365;Dbxref=GenBank:WP_001005988.1;Name=WP_001005988.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=SO06_RS21365;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_001005988.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 1505 2584 . + . ID=gene-SO06_RS21370;Name=SO06_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21370 NZ_MYDG01000025.1 Protein Homology CDS 1505 2584 . + 0 ID=cds-WP_000128338.1;Parent=gene-SO06_RS21370;Dbxref=GenBank:WP_000128338.1;Name=WP_000128338.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=SO06_RS21370;product=FecCD family ABC transporter permease;protein_id=WP_000128338.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 2584 3360 . + . ID=gene-SO06_RS21375;Name=SO06_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21375 NZ_MYDG01000025.1 Protein Homology CDS 2584 3360 . + 0 ID=cds-WP_017465744.1;Parent=gene-SO06_RS21375;Dbxref=GenBank:WP_017465744.1;Name=WP_017465744.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=SO06_RS21375;product=ABC transporter ATP-binding protein;protein_id=WP_017465744.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 3451 4203 . - . ID=gene-SO06_RS21380;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=SO06_RS21380 NZ_MYDG01000025.1 Protein Homology CDS 3451 4203 . - 0 ID=cds-WP_000301556.1;Parent=gene-SO06_RS21380;Dbxref=GenBank:WP_000301556.1;Name=WP_000301556.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=SO06_RS21380;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301556.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 4427 5467 . - . ID=gene-SO06_RS21390;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=SO06_RS21390 NZ_MYDG01000025.1 Protein Homology CDS 4427 5467 . - 0 ID=cds-WP_000931428.1;Parent=gene-SO06_RS21390;Dbxref=GenBank:WP_000931428.1;Name=WP_000931428.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=SO06_RS21390;product=galactose-1-epimerase;protein_id=WP_000931428.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 5461 6609 . - . ID=gene-SO06_RS21395;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=SO06_RS21395 NZ_MYDG01000025.1 Protein Homology CDS 5461 6609 . - 0 ID=cds-WP_023193990.1;Parent=gene-SO06_RS21395;Dbxref=GenBank:WP_023193990.1;Name=WP_023193990.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=SO06_RS21395;product=galactokinase;protein_id=WP_023193990.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 6612 7658 . - . ID=gene-SO06_RS21400;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=SO06_RS21400 NZ_MYDG01000025.1 Protein Homology CDS 6612 7658 . - 0 ID=cds-WP_000187473.1;Parent=gene-SO06_RS21400;Dbxref=GenBank:WP_000187473.1;Name=WP_000187473.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=SO06_RS21400;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000187473.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 7669 8685 . - . ID=gene-SO06_RS21405;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=SO06_RS21405 NZ_MYDG01000025.1 Protein Homology CDS 7669 8685 . - 0 ID=cds-WP_001265465.1;Parent=gene-SO06_RS21405;Dbxref=GenBank:WP_001265465.1;Name=WP_001265465.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=SO06_RS21405;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265465.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 8908 9816 . - . ID=gene-SO06_RS21410;Name=SO06_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21410 NZ_MYDG01000025.1 Protein Homology CDS 8908 9816 . - 0 ID=cds-WP_000885520.1;Parent=gene-SO06_RS21410;Dbxref=GenBank:WP_000885520.1;Name=WP_000885520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=SO06_RS21410;product=DUF2167 domain-containing protein;protein_id=WP_000885520.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 9987 11462 . - . ID=gene-SO06_RS21415;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=SO06_RS21415 NZ_MYDG01000025.1 Protein Homology CDS 9987 11462 . - 0 ID=cds-WP_001616901.1;Parent=gene-SO06_RS21415;Dbxref=GenBank:WP_001616901.1;Name=WP_001616901.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=SO06_RS21415;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_001616901.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 11530 12318 . - . ID=gene-SO06_RS21420;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=SO06_RS21420 NZ_MYDG01000025.1 Protein Homology CDS 11530 12318 . - 0 ID=cds-WP_001147416.1;Parent=gene-SO06_RS21420;Dbxref=GenBank:WP_001147416.1;Name=WP_001147416.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=SO06_RS21420;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147416.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 12447 12596 . + . ID=gene-SO06_RS21425;Name=SO06_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21425 NZ_MYDG01000025.1 Protein Homology CDS 12447 12596 . + 0 ID=cds-WP_000891513.1;Parent=gene-SO06_RS21425;Dbxref=GenBank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=SO06_RS21425;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 12763 13536 . + . ID=gene-SO06_RS21430;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=SO06_RS21430 NZ_MYDG01000025.1 Protein Homology CDS 12763 13536 . + 0 ID=cds-WP_000951416.1;Parent=gene-SO06_RS21430;Dbxref=GenBank:WP_000951416.1;Name=WP_000951416.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=SO06_RS21430;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000951416.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 13536 14225 . + . ID=gene-SO06_RS21435;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=SO06_RS21435 NZ_MYDG01000025.1 Protein Homology CDS 13536 14225 . + 0 ID=cds-WP_000604026.1;Parent=gene-SO06_RS21435;Dbxref=GenBank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=SO06_RS21435;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 14228 15286 . + . ID=gene-SO06_RS21440;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=SO06_RS21440 NZ_MYDG01000025.1 Protein Homology CDS 14228 15286 . + 0 ID=cds-WP_000891710.1;Parent=gene-SO06_RS21440;Dbxref=GenBank:WP_000891710.1;Name=WP_000891710.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=SO06_RS21440;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891710.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 15287 16105 . - . ID=gene-SO06_RS21445;Name=SO06_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21445 NZ_MYDG01000025.1 Protein Homology CDS 15287 16105 . - 0 ID=cds-WP_001748281.1;Parent=gene-SO06_RS21445;Dbxref=GenBank:WP_001748281.1;Name=WP_001748281.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=SO06_RS21445;product=pyridoxal phosphatase;protein_id=WP_001748281.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 16269 17264 . + . ID=gene-SO06_RS21450;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=SO06_RS21450 NZ_MYDG01000025.1 Protein Homology CDS 16269 17264 . + 0 ID=cds-WP_000815468.1;Parent=gene-SO06_RS21450;Dbxref=GenBank:WP_000815468.1;Name=WP_000815468.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=SO06_RS21450;product=6-phosphogluconolactonase;protein_id=WP_000815468.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 17408 18691 . - . ID=gene-SO06_RS21455;Name=SO06_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21455 NZ_MYDG01000025.1 Protein Homology CDS 17408 18691 . - 0 ID=cds-WP_001094776.1;Parent=gene-SO06_RS21455;Dbxref=GenBank:WP_001094776.1;Name=WP_001094776.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=SO06_RS21455;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094776.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 18929 20152 . + . ID=gene-SO06_RS21460;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=SO06_RS21460 NZ_MYDG01000025.1 Protein Homology CDS 18929 20152 . + 0 ID=cds-WP_023231415.1;Parent=gene-SO06_RS21460;Dbxref=GenBank:WP_023231415.1;Name=WP_023231415.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=SO06_RS21460;product=imidazolonepropionase;protein_id=WP_023231415.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 20149 21090 . + . ID=gene-SO06_RS21465;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=SO06_RS21465 NZ_MYDG01000025.1 Protein Homology CDS 20149 21090 . + 0 ID=cds-WP_023231414.1;Parent=gene-SO06_RS21465;Dbxref=GenBank:WP_023231414.1;Name=WP_023231414.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=SO06_RS21465;product=formimidoylglutamase;protein_id=WP_023231414.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 21135 21860 . + . ID=gene-SO06_RS21470;Name=SO06_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21470 NZ_MYDG01000025.1 Protein Homology CDS 21135 21860 . + 0 ID=cds-WP_000287413.1;Parent=gene-SO06_RS21470;Dbxref=GenBank:WP_000287413.1;Name=WP_000287413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=SO06_RS21470;product=histidine utilization repressor;protein_id=WP_000287413.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 22057 23742 . + . ID=gene-SO06_RS21475;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=SO06_RS21475 NZ_MYDG01000025.1 Protein Homology CDS 22057 23742 . + 0 ID=cds-WP_023231413.1;Parent=gene-SO06_RS21475;Dbxref=GenBank:WP_023231413.1;Name=WP_023231413.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=SO06_RS21475;product=urocanate hydratase;protein_id=WP_023231413.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 23744 25264 . + . ID=gene-SO06_RS21480;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=SO06_RS21480 NZ_MYDG01000025.1 Protein Homology CDS 23744 25264 . + 0 ID=cds-WP_023231412.1;Parent=gene-SO06_RS21480;Dbxref=GenBank:WP_023231412.1;Name=WP_023231412.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=SO06_RS21480;product=histidine ammonia-lyase;protein_id=WP_023231412.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 25349 25825 . - . ID=gene-SO06_RS21485;Name=SO06_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21485 NZ_MYDG01000025.1 Protein Homology CDS 25349 25825 . - 0 ID=cds-WP_023231411.1;Parent=gene-SO06_RS21485;Dbxref=GenBank:WP_023231411.1;Name=WP_023231411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=SO06_RS21485;product=kinase inhibitor;protein_id=WP_023231411.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 25883 27172 . - . ID=gene-SO06_RS21490;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=SO06_RS21490 NZ_MYDG01000025.1 Protein Homology CDS 25883 27172 . - 0 ID=cds-WP_000205502.1;Parent=gene-SO06_RS21490;Dbxref=GenBank:WP_000205502.1;Name=WP_000205502.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=SO06_RS21490;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_000205502.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 27259 28299 . + . ID=gene-SO06_RS21495;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=SO06_RS21495 NZ_MYDG01000025.1 Protein Homology CDS 27259 28299 . + 0 ID=cds-WP_000090727.1;Parent=gene-SO06_RS21495;Dbxref=GenBank:WP_000090727.1;Name=WP_000090727.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=SO06_RS21495;product=biotin synthase BioB;protein_id=WP_000090727.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 28296 29453 . + . ID=gene-SO06_RS21500;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=SO06_RS21500 NZ_MYDG01000025.1 Protein Homology CDS 28296 29453 . + 0 ID=cds-WP_023231410.1;Parent=gene-SO06_RS21500;Dbxref=GenBank:WP_023231410.1;Name=WP_023231410.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=SO06_RS21500;product=8-amino-7-oxononanoate synthase;protein_id=WP_023231410.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 29437 30192 . + . ID=gene-SO06_RS21505;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=SO06_RS21505 NZ_MYDG01000025.1 Protein Homology CDS 29437 30192 . + 0 ID=cds-WP_000079911.1;Parent=gene-SO06_RS21505;Dbxref=GenBank:WP_000079911.1;Name=WP_000079911.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=SO06_RS21505;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079911.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 30185 30871 . + . ID=gene-SO06_RS21510;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=SO06_RS21510 NZ_MYDG01000025.1 Protein Homology CDS 30185 30871 . + 0 ID=cds-WP_000167227.1;Parent=gene-SO06_RS21510;Dbxref=GenBank:WP_000167227.1;Name=WP_000167227.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=SO06_RS21510;product=dethiobiotin synthase;protein_id=WP_000167227.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 31522 33543 . + . ID=gene-SO06_RS21520;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=SO06_RS21520 NZ_MYDG01000025.1 Protein Homology CDS 31522 33543 . + 0 ID=cds-WP_000042502.1;Parent=gene-SO06_RS21520;Dbxref=GenBank:WP_000042502.1;Name=WP_000042502.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=SO06_RS21520;product=excinuclease ABC subunit UvrB;protein_id=WP_000042502.1;transl_table=11 NZ_MYDG01000025.1 RefSeq pseudogene 33850 34024 . + . ID=gene-SO06_RS25615;Name=SO06_RS25615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25615;pseudo=true NZ_MYDG01000025.1 Protein Homology CDS 33850 34024 . + 0 ID=cds-SO06_RS25615;Parent=gene-SO06_RS25615;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=SO06_RS25615;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 34032 36329 . + . ID=gene-SO06_RS21525;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=SO06_RS21525 NZ_MYDG01000025.1 Protein Homology CDS 34032 36329 . + 0 ID=cds-WP_023231409.1;Parent=gene-SO06_RS21525;Dbxref=GenBank:WP_023231409.1;Name=WP_023231409.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=SO06_RS21525;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=WP_023231409.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 36421 37329 . - . ID=gene-SO06_RS21530;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=SO06_RS21530 NZ_MYDG01000025.1 Protein Homology CDS 36421 37329 . - 0 ID=cds-WP_001246031.1;Parent=gene-SO06_RS21530;Dbxref=GenBank:WP_001246031.1;Name=WP_001246031.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=SO06_RS21530;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001246031.1;transl_table=11 NZ_MYDG01000025.1 cmsearch riboswitch 37594 37738 . + . ID=id-NZ_MYDG01000025.1:37594..37738;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_MYDG01000025.1 RefSeq gene 37726 38715 . + . ID=gene-SO06_RS21535;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=SO06_RS21535 NZ_MYDG01000025.1 Protein Homology CDS 37726 38715 . + 0 ID=cds-WP_000168180.1;Parent=gene-SO06_RS21535;Dbxref=GenBank:WP_000168180.1;Name=WP_000168180.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=SO06_RS21535;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_000168180.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 38737 39249 . + . ID=gene-SO06_RS21540;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=SO06_RS21540 NZ_MYDG01000025.1 Protein Homology CDS 38737 39249 . + 0 ID=cds-WP_000084604.1;Parent=gene-SO06_RS21540;Dbxref=GenBank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=SO06_RS21540;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 39252 39737 . + . ID=gene-SO06_RS21545;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=SO06_RS21545 NZ_MYDG01000025.1 Protein Homology CDS 39252 39737 . + 0 ID=cds-WP_000080894.1;Parent=gene-SO06_RS21545;Dbxref=GenBank:WP_000080894.1;Name=WP_000080894.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=SO06_RS21545;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080894.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 39730 39975 . + . ID=gene-SO06_RS21550;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=SO06_RS21550 NZ_MYDG01000025.1 Protein Homology CDS 39730 39975 . + 0 ID=cds-WP_000598596.1;Parent=gene-SO06_RS21550;Dbxref=GenBank:WP_000598596.1;Name=WP_000598596.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=SO06_RS21550;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598596.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 39977 40429 . + . ID=gene-SO06_RS21555;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=SO06_RS21555 NZ_MYDG01000025.1 Protein Homology CDS 39977 40429 . + 0 ID=cds-WP_020898569.1;Parent=gene-SO06_RS21555;Dbxref=GenBank:WP_020898569.1;Name=WP_020898569.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=SO06_RS21555;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_020898569.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 40477 41181 . + . ID=gene-SO06_RS21560;Name=SO06_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21560 NZ_MYDG01000025.1 Protein Homology CDS 40477 41181 . + 0 ID=cds-WP_000373611.1;Parent=gene-SO06_RS21560;Dbxref=GenBank:WP_000373611.1;Name=WP_000373611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=SO06_RS21560;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373611.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 41328 42035 . + . ID=gene-SO06_RS21570;Name=SO06_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21570 NZ_MYDG01000025.1 Protein Homology CDS 41328 42035 . + 0 ID=cds-WP_080204280.1;Parent=gene-SO06_RS21570;Dbxref=GenBank:WP_080204280.1;Name=WP_080204280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=SO06_RS21570;product=Bax inhibitor-1 family protein;protein_id=WP_080204280.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 42059 42667 . + . ID=gene-SO06_RS21575;Name=SO06_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21575 NZ_MYDG01000025.1 Protein Homology CDS 42059 42667 . + 0 ID=cds-WP_080204281.1;Parent=gene-SO06_RS21575;Dbxref=GenBank:WP_080204281.1;Name=WP_080204281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=SO06_RS21575;product=hypothetical protein;protein_id=WP_080204281.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 42675 43235 . + . ID=gene-SO06_RS21580;Name=SO06_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21580 NZ_MYDG01000025.1 Protein Homology CDS 42675 43235 . + 0 ID=cds-WP_001052196.1;Parent=gene-SO06_RS21580;Dbxref=GenBank:WP_001052196.1;Name=WP_001052196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=SO06_RS21580;product=hypothetical protein;protein_id=WP_001052196.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 43238 44200 . - . ID=gene-SO06_RS21585;Name=SO06_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21585 NZ_MYDG01000025.1 Protein Homology CDS 43238 44200 . - 0 ID=cds-WP_080204278.1;Parent=gene-SO06_RS21585;Dbxref=GenBank:WP_080204278.1;Name=WP_080204278.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=SO06_RS21585;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_080204278.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 44200 45441 . - . ID=gene-SO06_RS21590;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=SO06_RS21590 NZ_MYDG01000025.1 Protein Homology CDS 44200 45441 . - 0 ID=cds-WP_000649639.1;Parent=gene-SO06_RS21590;Dbxref=GenBank:WP_000649639.1;Name=WP_000649639.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=SO06_RS21590;product=cardiolipin synthase ClsB;protein_id=WP_000649639.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 45438 46196 . - . ID=gene-SO06_RS21595;Name=SO06_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21595 NZ_MYDG01000025.1 Protein Homology CDS 45438 46196 . - 0 ID=cds-WP_000192039.1;Parent=gene-SO06_RS21595;Dbxref=GenBank:WP_000192039.1;Name=WP_000192039.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=SO06_RS21595;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192039.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 46329 46739 . + . ID=gene-SO06_RS21600;Name=SO06_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21600 NZ_MYDG01000025.1 Protein Homology CDS 46329 46739 . + 0 ID=cds-WP_000871970.1;Parent=gene-SO06_RS21600;Dbxref=GenBank:WP_000871970.1;Name=WP_000871970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=SO06_RS21600;product=YbhQ family protein;protein_id=WP_000871970.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 46701 47807 . - . ID=gene-SO06_RS21605;Name=SO06_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21605 NZ_MYDG01000025.1 Protein Homology CDS 46701 47807 . - 0 ID=cds-WP_000469050.1;Parent=gene-SO06_RS21605;Dbxref=GenBank:WP_000469050.1;Name=WP_000469050.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=SO06_RS21605;product=ABC transporter permease;protein_id=WP_000469050.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 47923 49053 . - . ID=gene-SO06_RS21610;Name=SO06_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21610 NZ_MYDG01000025.1 Protein Homology CDS 47923 49053 . - 0 ID=cds-WP_000045765.1;Parent=gene-SO06_RS21610;Dbxref=GenBank:WP_000045765.1;Name=WP_000045765.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=SO06_RS21610;product=ABC transporter permease;protein_id=WP_000045765.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 49046 50782 . - . ID=gene-SO06_RS21615;Name=SO06_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21615 NZ_MYDG01000025.1 Protein Homology CDS 49046 50782 . - 0 ID=cds-WP_001287616.1;Parent=gene-SO06_RS21615;Dbxref=GenBank:WP_001287616.1;Name=WP_001287616.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=SO06_RS21615;product=ATP-binding cassette domain-containing protein;protein_id=WP_001287616.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 50775 51770 . - . ID=gene-SO06_RS21620;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=SO06_RS21620 NZ_MYDG01000025.1 Protein Homology CDS 50775 51770 . - 0 ID=cds-WP_080204279.1;Parent=gene-SO06_RS21620;Dbxref=GenBank:WP_080204279.1;Name=WP_080204279.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=SO06_RS21620;product=secretion protein HlyD;protein_id=WP_080204279.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 51770 52444 . - . ID=gene-SO06_RS21625;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=SO06_RS21625 NZ_MYDG01000025.1 Protein Homology CDS 51770 52444 . - 0 ID=cds-WP_001025254.1;Parent=gene-SO06_RS21625;Dbxref=GenBank:WP_001025254.1;Name=WP_001025254.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=SO06_RS21625;product=transcriptional regulator CecR;protein_id=WP_001025254.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 52518 53441 . - . ID=gene-SO06_RS21630;Name=SO06_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21630 NZ_MYDG01000025.1 Protein Homology CDS 52518 53441 . - 0 ID=cds-WP_001075547.1;Parent=gene-SO06_RS21630;Dbxref=GenBank:WP_001075547.1;Name=WP_001075547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225953.1;locus_tag=SO06_RS21630;product=LysR substrate-binding domain-containing protein;protein_id=WP_001075547.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 53780 55111 . + . ID=gene-SO06_RS21635;Name=SO06_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21635 NZ_MYDG01000025.1 Protein Homology CDS 53780 55111 . + 0 ID=cds-WP_001518324.1;Parent=gene-SO06_RS21635;Dbxref=GenBank:WP_001518324.1;Name=WP_001518324.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225955.1;locus_tag=SO06_RS21635;product=MFS transporter;protein_id=WP_001518324.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 55162 55911 . + . ID=gene-SO06_RS21640;Name=SO06_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21640 NZ_MYDG01000025.1 Protein Homology CDS 55162 55911 . + 0 ID=cds-WP_000924697.1;Parent=gene-SO06_RS21640;Dbxref=GenBank:WP_000924697.1;Name=WP_000924697.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225956.1;locus_tag=SO06_RS21640;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_000924697.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 55925 56770 . + . ID=gene-SO06_RS21645;Name=SO06_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21645 NZ_MYDG01000025.1 Protein Homology CDS 55925 56770 . + 0 ID=cds-WP_000784291.1;Parent=gene-SO06_RS21645;Dbxref=GenBank:WP_000784291.1;Name=WP_000784291.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225957.1;locus_tag=SO06_RS21645;product=transketolase;protein_id=WP_000784291.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 56770 57762 . + . ID=gene-SO06_RS21650;Name=SO06_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21650 NZ_MYDG01000025.1 Protein Homology CDS 56770 57762 . + 0 ID=cds-WP_000083414.1;Parent=gene-SO06_RS21650;Dbxref=GenBank:WP_000083414.1;Name=WP_000083414.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183482.1;locus_tag=SO06_RS21650;product=transketolase family protein;protein_id=WP_000083414.1;transl_table=11 NZ_MYDG01000025.1 RefSeq gene 57819 58957 . + . ID=gene-SO06_RS21655;Name=SO06_RS21655;end_range=58957,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21655;partial=true NZ_MYDG01000025.1 Protein Homology CDS 57819 58957 . + 0 ID=cds-WP_139783745.1;Parent=gene-SO06_RS21655;Dbxref=GenBank:WP_139783745.1;Name=WP_139783745.1;Ontology_term=GO:0016491;end_range=58957,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001668046.1;locus_tag=SO06_RS21655;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_139783745.1;transl_table=11 ##sequence-region NZ_MYDG01000026.1 1 57450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000026.1 RefSeq region 1 57450 . + . ID=NZ_MYDG01000026.1:1..57450;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000026.1 RefSeq gene 1 308 . + . ID=gene-SO06_RS21660;Name=SO06_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21660;partial=true;start_range=.,1 NZ_MYDG01000026.1 Protein Homology CDS 1 308 . + 2 ID=cds-WP_139771309.1;Parent=gene-SO06_RS21660;Dbxref=GenBank:WP_139771309.1;Name=WP_139771309.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462261.1;locus_tag=SO06_RS21660;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_139771309.1;start_range=.,1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 328 1059 . + . ID=gene-SO06_RS21665;Name=SO06_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21665 NZ_MYDG01000026.1 Protein Homology CDS 328 1059 . + 0 ID=cds-WP_023232443.1;Parent=gene-SO06_RS21665;Dbxref=GenBank:WP_023232443.1;Name=WP_023232443.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=SO06_RS21665;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_023232443.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 1093 2163 . - . ID=gene-SO06_RS21670;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=SO06_RS21670 NZ_MYDG01000026.1 Protein Homology CDS 1093 2163 . - 0 ID=cds-WP_000497705.1;Parent=gene-SO06_RS21670;Dbxref=GenBank:WP_000497705.1;Name=WP_000497705.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=SO06_RS21670;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497705.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 2256 3623 . - . ID=gene-SO06_RS21675;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=SO06_RS21675 NZ_MYDG01000026.1 Protein Homology CDS 2256 3623 . - 0 ID=cds-WP_000716690.1;Parent=gene-SO06_RS21675;Dbxref=GenBank:WP_000716690.1;Name=WP_000716690.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=SO06_RS21675;product=serine endoprotease DegQ;protein_id=WP_000716690.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 3780 4178 . - . ID=gene-SO06_RS21680;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=SO06_RS21680 NZ_MYDG01000026.1 Protein Homology CDS 3780 4178 . - 0 ID=cds-WP_001519074.1;Parent=gene-SO06_RS21680;Dbxref=GenBank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=SO06_RS21680;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 4371 5495 . + . ID=gene-SO06_RS21685;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=SO06_RS21685 NZ_MYDG01000026.1 Protein Homology CDS 4371 5495 . + 0 ID=cds-WP_001191222.1;Parent=gene-SO06_RS21685;Dbxref=GenBank:WP_001191222.1;Name=WP_001191222.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=SO06_RS21685;product=cell division protein ZapE;protein_id=WP_001191222.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 5796 6224 . + . ID=gene-SO06_RS21690;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=SO06_RS21690 NZ_MYDG01000026.1 Protein Homology CDS 5796 6224 . + 0 ID=cds-WP_000847559.1;Parent=gene-SO06_RS21690;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=SO06_RS21690;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 6240 6632 . + . ID=gene-SO06_RS21695;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=SO06_RS21695 NZ_MYDG01000026.1 Protein Homology CDS 6240 6632 . + 0 ID=cds-WP_000829815.1;Parent=gene-SO06_RS21695;Dbxref=GenBank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=SO06_RS21695;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 6832 7584 . + . ID=gene-SO06_RS21700;Name=SO06_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21700 NZ_MYDG01000026.1 Protein Homology CDS 6832 7584 . + 0 ID=cds-WP_000950539.1;Parent=gene-SO06_RS21700;Dbxref=GenBank:WP_000950539.1;Name=WP_000950539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=SO06_RS21700;product=DUF695 domain-containing protein;protein_id=WP_000950539.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 7847 8485 . + . ID=gene-SO06_RS21705;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=SO06_RS21705 NZ_MYDG01000026.1 Protein Homology CDS 7847 8485 . + 0 ID=cds-WP_000257298.1;Parent=gene-SO06_RS21705;Dbxref=GenBank:WP_000257298.1;Name=WP_000257298.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=SO06_RS21705;product=stringent starvation protein SspA;protein_id=WP_000257298.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 8491 8991 . + . ID=gene-SO06_RS21710;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=SO06_RS21710 NZ_MYDG01000026.1 Protein Homology CDS 8491 8991 . + 0 ID=cds-WP_000366112.1;Parent=gene-SO06_RS21710;Dbxref=GenBank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=SO06_RS21710;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 9100 9891 . + . ID=gene-SO06_RS21715;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=SO06_RS21715 NZ_MYDG01000026.1 Protein Homology CDS 9100 9891 . + 0 ID=cds-WP_000382926.1;Parent=gene-SO06_RS21715;Dbxref=GenBank:WP_000382926.1;Name=WP_000382926.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=SO06_RS21715;product=transcriptional regulator NanR;protein_id=WP_000382926.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 10026 10919 . + . ID=gene-SO06_RS21720;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=SO06_RS21720 NZ_MYDG01000026.1 Protein Homology CDS 10026 10919 . + 0 ID=cds-WP_001029667.1;Parent=gene-SO06_RS21720;Dbxref=GenBank:WP_001029667.1;Name=WP_001029667.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=SO06_RS21720;product=N-acetylneuraminate lyase;protein_id=WP_001029667.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 11035 12525 . + . ID=gene-SO06_RS21725;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=SO06_RS21725 NZ_MYDG01000026.1 Protein Homology CDS 11035 12525 . + 0 ID=cds-WP_000108071.1;Parent=gene-SO06_RS21725;Dbxref=GenBank:WP_000108071.1;Name=WP_000108071.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=SO06_RS21725;product=sialic acid transporter NanT;protein_id=WP_000108071.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 12572 13261 . + . ID=gene-SO06_RS21730;Name=SO06_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21730 NZ_MYDG01000026.1 Protein Homology CDS 12572 13261 . + 0 ID=cds-WP_000054439.1;Parent=gene-SO06_RS21730;Dbxref=GenBank:WP_000054439.1;Name=WP_000054439.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=SO06_RS21730;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054439.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 13258 14133 . + . ID=gene-SO06_RS21735;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=SO06_RS21735 NZ_MYDG01000026.1 Protein Homology CDS 13258 14133 . + 0 ID=cds-WP_000208983.1;Parent=gene-SO06_RS21735;Dbxref=GenBank:WP_000208983.1;Name=WP_000208983.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=SO06_RS21735;product=N-acetylmannosamine kinase;protein_id=WP_000208983.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 14130 14597 . + . ID=gene-SO06_RS21740;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=SO06_RS21740 NZ_MYDG01000026.1 Protein Homology CDS 14130 14597 . + 0 ID=cds-WP_000979901.1;Parent=gene-SO06_RS21740;Dbxref=GenBank:WP_000979901.1;Name=WP_000979901.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=SO06_RS21740;product=N-acetylneuraminate anomerase;protein_id=WP_000979901.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 14680 15960 . - . ID=gene-SO06_RS21745;Name=SO06_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21745 NZ_MYDG01000026.1 Protein Homology CDS 14680 15960 . - 0 ID=cds-WP_023232444.1;Parent=gene-SO06_RS21745;Dbxref=GenBank:WP_023232444.1;Name=WP_023232444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=SO06_RS21745;product=cytosine deaminase;protein_id=WP_023232444.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 15947 17200 . - . ID=gene-SO06_RS21750;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=SO06_RS21750 NZ_MYDG01000026.1 Protein Homology CDS 15947 17200 . - 0 ID=cds-WP_023232445.1;Parent=gene-SO06_RS21750;Dbxref=GenBank:WP_023232445.1;Name=WP_023232445.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=SO06_RS21750;product=cytosine permease;protein_id=WP_023232445.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 17316 18419 . - . ID=gene-SO06_RS21755;Name=SO06_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21755 NZ_MYDG01000026.1 Protein Homology CDS 17316 18419 . - 0 ID=cds-WP_023232446.1;Parent=gene-SO06_RS21755;Dbxref=GenBank:WP_023232446.1;Name=WP_023232446.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=SO06_RS21755;product=PDDEXK nuclease domain-containing protein;protein_id=WP_023232446.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 18627 20045 . - . ID=gene-SO06_RS21760;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=SO06_RS21760 NZ_MYDG01000026.1 Protein Homology CDS 18627 20045 . - 0 ID=cds-WP_000081637.1;Parent=gene-SO06_RS21760;Dbxref=GenBank:WP_000081637.1;Name=WP_000081637.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=SO06_RS21760;product=glutamate synthase subunit GltD;protein_id=WP_000081637.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 20055 24515 . - . ID=gene-SO06_RS21765;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=SO06_RS21765 NZ_MYDG01000026.1 Protein Homology CDS 20055 24515 . - 0 ID=cds-WP_001748595.1;Parent=gene-SO06_RS21765;Dbxref=GenBank:WP_001748595.1;Name=WP_001748595.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=SO06_RS21765;product=glutamate synthase large subunit;protein_id=WP_001748595.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 25187 26116 . + . ID=gene-SO06_RS21775;Name=SO06_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21775 NZ_MYDG01000026.1 Protein Homology CDS 25187 26116 . + 0 ID=cds-WP_023232447.1;Parent=gene-SO06_RS21775;Dbxref=GenBank:WP_023232447.1;Name=WP_023232447.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=SO06_RS21775;product=TIGR01212 family radical SAM protein;protein_id=WP_023232447.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 26210 28546 . + . ID=gene-SO06_RS21780;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=SO06_RS21780 NZ_MYDG01000026.1 Protein Homology CDS 26210 28546 . + 0 ID=cds-WP_000809820.1;Parent=gene-SO06_RS21780;Dbxref=GenBank:WP_000809820.1;Name=WP_000809820.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=SO06_RS21780;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809820.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 28773 29426 . + . ID=gene-SO06_RS21785;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=SO06_RS21785 NZ_MYDG01000026.1 Protein Homology CDS 28773 29426 . + 0 ID=cds-WP_000719811.1;Parent=gene-SO06_RS21785;Dbxref=GenBank:WP_000719811.1;Name=WP_000719811.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=SO06_RS21785;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_000719811.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 29423 30151 . + . ID=gene-SO06_RS21790;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=SO06_RS21790 NZ_MYDG01000026.1 Protein Homology CDS 29423 30151 . + 0 ID=cds-WP_000044646.1;Parent=gene-SO06_RS21790;Dbxref=GenBank:WP_000044646.1;Name=WP_000044646.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=SO06_RS21790;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000044646.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 30226 30858 . - . ID=gene-SO06_RS21795;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=SO06_RS21795 NZ_MYDG01000026.1 Protein Homology CDS 30226 30858 . - 0 ID=cds-WP_000602192.1;Parent=gene-SO06_RS21795;Dbxref=GenBank:WP_000602192.1;Name=WP_000602192.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=SO06_RS21795;product=PhoP regulatory network protein YrbL;protein_id=WP_000602192.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 31108 31380 . - . ID=gene-SO06_RS21805;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=SO06_RS21805 NZ_MYDG01000026.1 Protein Homology CDS 31108 31380 . - 0 ID=cds-WP_000216797.1;Parent=gene-SO06_RS21805;Dbxref=GenBank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=SO06_RS21805;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 31377 32231 . - . ID=gene-SO06_RS21810;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=SO06_RS21810 NZ_MYDG01000026.1 Protein Homology CDS 31377 32231 . - 0 ID=cds-WP_000243749.1;Parent=gene-SO06_RS21810;Dbxref=GenBank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=SO06_RS21810;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 32277 32768 . - . ID=gene-SO06_RS21815;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=SO06_RS21815 NZ_MYDG01000026.1 Protein Homology CDS 32277 32768 . - 0 ID=cds-WP_000609332.1;Parent=gene-SO06_RS21815;Dbxref=GenBank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=SO06_RS21815;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 32886 33173 . - . ID=gene-SO06_RS21820;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=SO06_RS21820 NZ_MYDG01000026.1 Protein Homology CDS 32886 33173 . - 0 ID=cds-WP_001176589.1;Parent=gene-SO06_RS21820;Dbxref=GenBank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=SO06_RS21820;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 33196 34629 . - . ID=gene-SO06_RS21825;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=SO06_RS21825 NZ_MYDG01000026.1 Protein Homology CDS 33196 34629 . - 0 ID=cds-WP_000809020.1;Parent=gene-SO06_RS21825;Dbxref=GenBank:WP_000809020.1;Name=WP_000809020.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=SO06_RS21825;product=RNA polymerase factor sigma-54;protein_id=WP_000809020.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 34677 35402 . - . ID=gene-SO06_RS21830;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=SO06_RS21830 NZ_MYDG01000026.1 Protein Homology CDS 34677 35402 . - 0 ID=cds-WP_000224104.1;Parent=gene-SO06_RS21830;Dbxref=GenBank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=SO06_RS21830;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 35409 35963 . - . ID=gene-SO06_RS21835;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=SO06_RS21835 NZ_MYDG01000026.1 Protein Homology CDS 35409 35963 . - 0 ID=cds-WP_000669770.1;Parent=gene-SO06_RS21835;Dbxref=GenBank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=SO06_RS21835;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 35932 36507 . - . ID=gene-SO06_RS21840;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=SO06_RS21840 NZ_MYDG01000026.1 Protein Homology CDS 35932 36507 . - 0 ID=cds-WP_000047845.1;Parent=gene-SO06_RS21840;Dbxref=GenBank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=SO06_RS21840;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 36504 37070 . - . ID=gene-SO06_RS21845;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=SO06_RS21845 NZ_MYDG01000026.1 Protein Homology CDS 36504 37070 . - 0 ID=cds-WP_023232448.1;Parent=gene-SO06_RS21845;Dbxref=GenBank:WP_023232448.1;Name=WP_023232448.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=SO06_RS21845;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_023232448.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 37091 38077 . - . ID=gene-SO06_RS21850;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=SO06_RS21850 NZ_MYDG01000026.1 Protein Homology CDS 37091 38077 . - 0 ID=cds-WP_000018619.1;Parent=gene-SO06_RS21850;Dbxref=GenBank:WP_000018619.1;Name=WP_000018619.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=SO06_RS21850;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_000018619.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 38091 39068 . - . ID=gene-SO06_RS21855;Name=SO06_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21855 NZ_MYDG01000026.1 Protein Homology CDS 38091 39068 . - 0 ID=cds-WP_000922731.1;Parent=gene-SO06_RS21855;Dbxref=GenBank:WP_000922731.1;Name=WP_000922731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=SO06_RS21855;product=calcium/sodium antiporter;protein_id=WP_000922731.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 39281 40093 . + . ID=gene-SO06_RS21860;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=SO06_RS21860 NZ_MYDG01000026.1 Protein Homology CDS 39281 40093 . + 0 ID=cds-WP_000531566.1;Parent=gene-SO06_RS21860;Dbxref=GenBank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=SO06_RS21860;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 40101 40883 . + . ID=gene-SO06_RS21865;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=SO06_RS21865 NZ_MYDG01000026.1 Protein Homology CDS 40101 40883 . + 0 ID=cds-WP_000925786.1;Parent=gene-SO06_RS21865;Dbxref=GenBank:WP_000925786.1;Name=WP_000925786.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=SO06_RS21865;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 40888 41439 . + . ID=gene-SO06_RS21870;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=SO06_RS21870 NZ_MYDG01000026.1 Protein Homology CDS 40888 41439 . + 0 ID=cds-WP_001193591.1;Parent=gene-SO06_RS21870;Dbxref=GenBank:WP_001193591.1;Name=WP_001193591.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=SO06_RS21870;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001193591.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 41458 42093 . + . ID=gene-SO06_RS21875;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=SO06_RS21875 NZ_MYDG01000026.1 Protein Homology CDS 41458 42093 . + 0 ID=cds-WP_000476475.1;Parent=gene-SO06_RS21875;Dbxref=GenBank:WP_000476475.1;Name=WP_000476475.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=SO06_RS21875;product=phospholipid-binding protein MlaC;protein_id=WP_000476475.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 42093 42389 . + . ID=gene-SO06_RS21880;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=SO06_RS21880 NZ_MYDG01000026.1 Protein Homology CDS 42093 42389 . + 0 ID=cds-WP_000188844.1;Parent=gene-SO06_RS21880;Dbxref=GenBank:WP_000188844.1;Name=WP_000188844.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=SO06_RS21880;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188844.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 42577 42831 . + . ID=gene-SO06_RS21885;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=SO06_RS21885 NZ_MYDG01000026.1 Protein Homology CDS 42577 42831 . + 0 ID=cds-WP_001518349.1;Parent=gene-SO06_RS21885;Dbxref=GenBank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=SO06_RS21885;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 42885 44144 . + . ID=gene-SO06_RS21890;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=SO06_RS21890 NZ_MYDG01000026.1 Protein Homology CDS 42885 44144 . + 0 ID=cds-WP_000357288.1;Parent=gene-SO06_RS21890;Dbxref=GenBank:WP_000357288.1;Name=WP_000357288.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=SO06_RS21890;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357288.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 44203 44490 . - . ID=gene-SO06_RS21895;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=SO06_RS21895 NZ_MYDG01000026.1 Protein Homology CDS 44203 44490 . - 0 ID=cds-WP_000444167.1;Parent=gene-SO06_RS21895;Dbxref=GenBank:WP_000444167.1;Name=WP_000444167.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=SO06_RS21895;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444167.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 44722 45693 . - . ID=gene-SO06_RS21900;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=SO06_RS21900 NZ_MYDG01000026.1 Protein Homology CDS 44722 45693 . - 0 ID=cds-WP_001047354.1;Parent=gene-SO06_RS21900;Dbxref=GenBank:WP_001047354.1;Name=WP_001047354.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=SO06_RS21900;product=octaprenyl diphosphate synthase;protein_id=WP_001047354.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 45951 46262 . + . ID=gene-SO06_RS21905;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=SO06_RS21905 NZ_MYDG01000026.1 Protein Homology CDS 45951 46262 . + 0 ID=cds-WP_000271396.1;Parent=gene-SO06_RS21905;Dbxref=GenBank:WP_000271396.1;Name=WP_000271396.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=SO06_RS21905;product=50S ribosomal protein L21;protein_id=WP_000271396.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 46282 46539 . + . ID=gene-SO06_RS21910;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=SO06_RS21910 NZ_MYDG01000026.1 Protein Homology CDS 46282 46539 . + 0 ID=cds-WP_000940593.1;Parent=gene-SO06_RS21910;Dbxref=GenBank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=SO06_RS21910;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 46669 47634 . + . ID=gene-SO06_RS21915;Name=SO06_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21915 NZ_MYDG01000026.1 Protein Homology CDS 46669 47634 . + 0 ID=cds-WP_023232450.1;Parent=gene-SO06_RS21915;Dbxref=GenBank:WP_023232450.1;Name=WP_023232450.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=SO06_RS21915;product=DMT family transporter;protein_id=WP_023232450.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 47650 48822 . + . ID=gene-SO06_RS21920;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=SO06_RS21920 NZ_MYDG01000026.1 Protein Homology CDS 47650 48822 . + 0 ID=cds-WP_000673556.1;Parent=gene-SO06_RS21920;Dbxref=GenBank:WP_000673556.1;Name=WP_000673556.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=SO06_RS21920;product=Obg family GTPase CgtA;protein_id=WP_000673556.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 48953 50386 . - . ID=gene-SO06_RS21925;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=SO06_RS21925 NZ_MYDG01000026.1 Protein Homology CDS 48953 50386 . - 0 ID=cds-WP_001212686.1;Parent=gene-SO06_RS21925;Dbxref=GenBank:WP_001212686.1;Name=WP_001212686.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=SO06_RS21925;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212686.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 50634 51110 . + . ID=gene-SO06_RS21930;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=SO06_RS21930 NZ_MYDG01000026.1 Protein Homology CDS 50634 51110 . + 0 ID=cds-WP_001148008.1;Parent=gene-SO06_RS21930;Dbxref=GenBank:WP_001148008.1;Name=WP_001148008.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=SO06_RS21930;product=transcription elongation factor GreA;protein_id=WP_001148008.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 51266 51559 . - . ID=gene-SO06_RS21935;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=SO06_RS21935 NZ_MYDG01000026.1 Protein Homology CDS 51266 51559 . - 0 ID=cds-WP_001592995.1;Parent=gene-SO06_RS21935;Dbxref=GenBank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=SO06_RS21935;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 51686 52312 . + . ID=gene-SO06_RS21940;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=SO06_RS21940 NZ_MYDG01000026.1 Protein Homology CDS 51686 52312 . + 0 ID=cds-WP_000145974.1;Parent=gene-SO06_RS21940;Dbxref=GenBank:WP_000145974.1;Name=WP_000145974.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=SO06_RS21940;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145974.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 52416 54350 . + . ID=gene-SO06_RS21950;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=SO06_RS21950 NZ_MYDG01000026.1 Protein Homology CDS 52416 54350 . + 0 ID=cds-WP_001107481.1;Parent=gene-SO06_RS21950;Dbxref=GenBank:WP_001107481.1;Name=WP_001107481.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=SO06_RS21950;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107481.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 54455 55303 . + . ID=gene-SO06_RS21955;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=SO06_RS21955 NZ_MYDG01000026.1 Protein Homology CDS 54455 55303 . + 0 ID=cds-WP_000764711.1;Parent=gene-SO06_RS21955;Dbxref=GenBank:WP_000764711.1;Name=WP_000764711.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=SO06_RS21955;product=dihydropteroate synthase;protein_id=WP_000764711.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 55296 56633 . + . ID=gene-SO06_RS21960;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=SO06_RS21960 NZ_MYDG01000026.1 Protein Homology CDS 55296 56633 . + 0 ID=cds-WP_000071169.1;Parent=gene-SO06_RS21960;Dbxref=GenBank:WP_000071169.1;Name=WP_000071169.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=SO06_RS21960;product=phosphoglucosamine mutase;protein_id=WP_000071169.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 56856 57188 . + . ID=gene-SO06_RS21965;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=SO06_RS21965 NZ_MYDG01000026.1 Protein Homology CDS 56856 57188 . + 0 ID=cds-WP_000272680.1;Parent=gene-SO06_RS21965;Dbxref=GenBank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=SO06_RS21965;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11 NZ_MYDG01000026.1 RefSeq gene 57202 57288 . + . ID=gene-SO06_RS21970;Name=SO06_RS21970;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS21970 NZ_MYDG01000026.1 tRNAscan-SE tRNA 57202 57288 . + . ID=rna-SO06_RS21970;Parent=gene-SO06_RS21970;anticodon=(pos:57236..57238);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS21970;product=tRNA-Leu NZ_MYDG01000026.1 tRNAscan-SE exon 57202 57288 . + . ID=exon-SO06_RS21970-1;Parent=rna-SO06_RS21970;anticodon=(pos:57236..57238);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS21970;product=tRNA-Leu ##sequence-region NZ_MYDG01000027.1 1 56674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000027.1 RefSeq region 1 56674 . + . ID=NZ_MYDG01000027.1:1..56674;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000027.1 RefSeq gene 176 1315 . - . ID=gene-SO06_RS21975;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=SO06_RS21975 NZ_MYDG01000027.1 Protein Homology CDS 176 1315 . - 0 ID=cds-WP_001119009.1;Parent=gene-SO06_RS21975;Dbxref=GenBank:WP_001119009.1;Name=WP_001119009.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=SO06_RS21975;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 1401 3317 . - . ID=gene-SO06_RS21980;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=SO06_RS21980 NZ_MYDG01000027.1 Protein Homology CDS 1401 3317 . - 0 ID=cds-WP_000516125.1;Parent=gene-SO06_RS21980;Dbxref=GenBank:WP_000516125.1;Name=WP_000516125.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=SO06_RS21980;product=molecular chaperone DnaK;protein_id=WP_000516125.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 3666 4070 . + . ID=gene-SO06_RS21985;Name=SO06_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS21985 NZ_MYDG01000027.1 Protein Homology CDS 3666 4070 . + 0 ID=cds-WP_001258086.1;Parent=gene-SO06_RS21985;Dbxref=GenBank:WP_001258086.1;Name=WP_001258086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=SO06_RS21985;product=DUF2541 family protein;protein_id=WP_001258086.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 4106 4819 . + . ID=gene-SO06_RS21990;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=SO06_RS21990 NZ_MYDG01000027.1 Protein Homology CDS 4106 4819 . + 0 ID=cds-WP_001103477.1;Parent=gene-SO06_RS21990;Dbxref=GenBank:WP_001103477.1;Name=WP_001103477.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=SO06_RS21990;product=acidic protein MsyB;protein_id=WP_001103477.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 4969 5535 . + . ID=gene-SO06_RS21995;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=SO06_RS21995 NZ_MYDG01000027.1 Protein Homology CDS 4969 5535 . + 0 ID=cds-WP_000528525.1;Parent=gene-SO06_RS21995;Dbxref=GenBank:WP_000528525.1;Name=WP_000528525.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=SO06_RS21995;product=acetate uptake transporter;protein_id=WP_000528525.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 5592 6182 . - . ID=gene-SO06_RS22000;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=SO06_RS22000 NZ_MYDG01000027.1 Protein Homology CDS 5592 6182 . - 0 ID=cds-WP_000380373.1;Parent=gene-SO06_RS22000;Dbxref=GenBank:WP_000380373.1;Name=WP_000380373.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=SO06_RS22000;product=molybdopterin adenylyltransferase;protein_id=WP_000380373.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 6293 7246 . - . ID=gene-SO06_RS22005;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=SO06_RS22005 NZ_MYDG01000027.1 Protein Homology CDS 6293 7246 . - 0 ID=cds-WP_000130175.1;Parent=gene-SO06_RS22005;Dbxref=GenBank:WP_000130175.1;Name=WP_000130175.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=SO06_RS22005;product=transaldolase;protein_id=WP_000130175.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 7515 8945 . + . ID=gene-SO06_RS22010;Name=SO06_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22010 NZ_MYDG01000027.1 Protein Homology CDS 7515 8945 . + 0 ID=cds-WP_001113819.1;Parent=gene-SO06_RS22010;Dbxref=GenBank:WP_001113819.1;Name=WP_001113819.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=SO06_RS22010;product=alanine/glycine:cation symporter family protein;protein_id=WP_001113819.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 9024 9797 . + . ID=gene-SO06_RS22015;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=SO06_RS22015 NZ_MYDG01000027.1 Protein Homology CDS 9024 9797 . + 0 ID=cds-WP_000906175.1;Parent=gene-SO06_RS22015;Dbxref=GenBank:WP_000906175.1;Name=WP_000906175.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=SO06_RS22015;product=peroxide stress protein YaaA;protein_id=WP_000906175.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 9891 11177 . - . ID=gene-SO06_RS22020;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=SO06_RS22020 NZ_MYDG01000027.1 Protein Homology CDS 9891 11177 . - 0 ID=cds-WP_000781110.1;Parent=gene-SO06_RS22020;Dbxref=GenBank:WP_000781110.1;Name=WP_000781110.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=SO06_RS22020;product=threonine synthase;protein_id=WP_000781110.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 11181 12110 . - . ID=gene-SO06_RS22025;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=SO06_RS22025 NZ_MYDG01000027.1 Protein Homology CDS 11181 12110 . - 0 ID=cds-WP_000241685.1;Parent=gene-SO06_RS22025;Dbxref=GenBank:WP_000241685.1;Name=WP_000241685.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=SO06_RS22025;product=homoserine kinase;protein_id=WP_000241685.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 12112 14574 . - . ID=gene-SO06_RS22030;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=SO06_RS22030 NZ_MYDG01000027.1 Protein Homology CDS 12112 14574 . - 0 ID=cds-WP_023232158.1;Parent=gene-SO06_RS22030;Dbxref=GenBank:WP_023232158.1;Name=WP_023232158.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=SO06_RS22030;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_023232158.1;transl_table=11 NZ_MYDG01000027.1 cmsearch sequence_feature 14600 14720 . - . ID=id-NZ_MYDG01000027.1:14600..14720;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_MYDG01000027.1 RefSeq gene 14656 14721 . - . ID=gene-SO06_RS22035;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=SO06_RS22035 NZ_MYDG01000027.1 Protein Homology CDS 14656 14721 . - 0 ID=cds-WP_001575544.1;Parent=gene-SO06_RS22035;Dbxref=GenBank:WP_001575544.1;Name=WP_001575544.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=SO06_RS22035;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 14935 15621 . - . ID=gene-SO06_RS22040;Name=SO06_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22040 NZ_MYDG01000027.1 Protein Homology CDS 14935 15621 . - 0 ID=cds-WP_023232159.1;Parent=gene-SO06_RS22040;Dbxref=GenBank:WP_023232159.1;Name=WP_023232159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=SO06_RS22040;product=tRNA/rRNA methyltransferase;protein_id=WP_023232159.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 16021 16161 . - . ID=gene-SO06_RS22045;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=SO06_RS22045 NZ_MYDG01000027.1 Protein Homology CDS 16021 16161 . - 0 ID=cds-WP_001541509.1;Parent=gene-SO06_RS22045;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=SO06_RS22045;product=protein YjjY;protein_id=WP_001541509.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 16257 16973 . + . ID=gene-SO06_RS22050;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=SO06_RS22050 NZ_MYDG01000027.1 Protein Homology CDS 16257 16973 . + 0 ID=cds-WP_001194359.1;Parent=gene-SO06_RS22050;Dbxref=GenBank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=SO06_RS22050;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 17240 17554 . + . ID=gene-SO06_RS22055;Name=SO06_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22055 NZ_MYDG01000027.1 Protein Homology CDS 17240 17554 . + 0 ID=cds-WP_000749515.1;Parent=gene-SO06_RS22055;Dbxref=GenBank:WP_000749515.1;Name=WP_000749515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=SO06_RS22055;product=hypothetical protein;protein_id=WP_000749515.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 17939 18610 . + . ID=gene-SO06_RS22060;Name=SO06_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22060 NZ_MYDG01000027.1 Protein Homology CDS 17939 18610 . + 0 ID=cds-WP_023232160.1;Parent=gene-SO06_RS22060;Dbxref=GenBank:WP_023232160.1;Name=WP_023232160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=SO06_RS22060;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_023232160.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 18949 19494 . + . ID=gene-SO06_RS22065;Name=SO06_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22065 NZ_MYDG01000027.1 Protein Homology CDS 18949 19494 . + 0 ID=cds-WP_023232161.1;Parent=gene-SO06_RS22065;Dbxref=GenBank:WP_023232161.1;Name=WP_023232161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=SO06_RS22065;product=fimbrial protein;protein_id=WP_023232161.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 19565 20248 . + . ID=gene-SO06_RS22070;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=SO06_RS22070 NZ_MYDG01000027.1 Protein Homology CDS 19565 20248 . + 0 ID=cds-WP_000680522.1;Parent=gene-SO06_RS22070;Dbxref=GenBank:WP_000680522.1;Name=WP_000680522.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=SO06_RS22070;product=fimbrial biogenesis chaperone SthA;protein_id=WP_000680522.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 20294 22831 . + . ID=gene-SO06_RS22075;Name=SO06_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22075 NZ_MYDG01000027.1 Protein Homology CDS 20294 22831 . + 0 ID=cds-WP_023232162.1;Parent=gene-SO06_RS22075;Dbxref=GenBank:WP_023232162.1;Name=WP_023232162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=SO06_RS22075;product=fimbrial outer membrane usher protein;protein_id=WP_023232162.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 22849 23406 . + . ID=gene-SO06_RS22080;Name=SO06_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22080 NZ_MYDG01000027.1 Protein Homology CDS 22849 23406 . + 0 ID=cds-WP_001056980.1;Parent=gene-SO06_RS22080;Dbxref=GenBank:WP_001056980.1;Name=WP_001056980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=SO06_RS22080;product=fimbrial protein;protein_id=WP_001056980.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 23447 24532 . + . ID=gene-SO06_RS22085;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=SO06_RS22085 NZ_MYDG01000027.1 Protein Homology CDS 23447 24532 . + 0 ID=cds-WP_023181320.1;Parent=gene-SO06_RS22085;Dbxref=GenBank:WP_023181320.1;Name=WP_023181320.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=SO06_RS22085;product=fimbrial major subunit SthE;protein_id=WP_023181320.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 24590 25939 . - . ID=gene-SO06_RS22090;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=SO06_RS22090 NZ_MYDG01000027.1 Protein Homology CDS 24590 25939 . - 0 ID=cds-WP_000920382.1;Parent=gene-SO06_RS22090;Dbxref=GenBank:WP_000920382.1;Name=WP_000920382.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=SO06_RS22090;product=cell envelope integrity protein CreD;protein_id=WP_000920382.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 25997 27421 . - . ID=gene-SO06_RS22095;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=SO06_RS22095 NZ_MYDG01000027.1 Protein Homology CDS 25997 27421 . - 0 ID=cds-WP_080204282.1;Parent=gene-SO06_RS22095;Dbxref=GenBank:WP_080204282.1;Name=WP_080204282.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=SO06_RS22095;product=two-component system sensor histidine kinase CreC;protein_id=WP_080204282.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 27421 28110 . - . ID=gene-SO06_RS22100;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=SO06_RS22100 NZ_MYDG01000027.1 Protein Homology CDS 27421 28110 . - 0 ID=cds-WP_001187046.1;Parent=gene-SO06_RS22100;Dbxref=GenBank:WP_001187046.1;Name=WP_001187046.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=SO06_RS22100;product=two-component system response regulator CreB;protein_id=WP_001187046.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 28123 28596 . - . ID=gene-SO06_RS22105;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=SO06_RS22105 NZ_MYDG01000027.1 Protein Homology CDS 28123 28596 . - 0 ID=cds-WP_000875811.1;Parent=gene-SO06_RS22105;Dbxref=GenBank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=SO06_RS22105;product=protein CreA;protein_id=WP_000875811.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 28808 29677 . + . ID=gene-SO06_RS22110;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=SO06_RS22110 NZ_MYDG01000027.1 Protein Homology CDS 28808 29677 . + 0 ID=cds-WP_023232164.1;Parent=gene-SO06_RS22110;Dbxref=GenBank:WP_023232164.1;Name=WP_023232164.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=SO06_RS22110;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_023232164.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 29674 30321 . - . ID=gene-SO06_RS22115;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=SO06_RS22115 NZ_MYDG01000027.1 Protein Homology CDS 29674 30321 . - 0 ID=cds-WP_000942363.1;Parent=gene-SO06_RS22115;Dbxref=GenBank:WP_000942363.1;Name=WP_000942363.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=SO06_RS22115;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942363.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 30370 30885 . + . ID=gene-SO06_RS22120;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=SO06_RS22120 NZ_MYDG01000027.1 Protein Homology CDS 30370 30885 . + 0 ID=cds-WP_000554310.1;Parent=gene-SO06_RS22120;Dbxref=GenBank:WP_000554310.1;Name=WP_000554310.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=SO06_RS22120;product=inosine/xanthosine triphosphatase;protein_id=WP_000554310.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 30987 31313 . - . ID=gene-SO06_RS22125;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=SO06_RS22125 NZ_MYDG01000027.1 Protein Homology CDS 30987 31313 . - 0 ID=cds-WP_000192002.1;Parent=gene-SO06_RS22125;Dbxref=GenBank:WP_000192002.1;Name=WP_000192002.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=SO06_RS22125;product=trp operon repressor;protein_id=WP_000192002.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 31371 33308 . - . ID=gene-SO06_RS22130;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=SO06_RS22130 NZ_MYDG01000027.1 Protein Homology CDS 31371 33308 . - 0 ID=cds-WP_023242943.1;Parent=gene-SO06_RS22130;Dbxref=GenBank:WP_023242943.1;Name=WP_023242943.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=SO06_RS22130;product=murein transglycosylase;protein_id=WP_023242943.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 33517 35184 . + . ID=gene-SO06_RS22140;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=SO06_RS22140 NZ_MYDG01000027.1 Protein Homology CDS 33517 35184 . + 0 ID=cds-WP_000046770.1;Parent=gene-SO06_RS22140;Dbxref=GenBank:WP_000046770.1;Name=WP_000046770.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=SO06_RS22140;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046770.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 35302 36534 . - . ID=gene-SO06_RS22145;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=SO06_RS22145 NZ_MYDG01000027.1 Protein Homology CDS 35302 36534 . - 0 ID=cds-WP_000093829.1;Parent=gene-SO06_RS22145;Dbxref=GenBank:WP_000093829.1;Name=WP_000093829.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=SO06_RS22145;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_000093829.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 36685 38067 . - . ID=gene-SO06_RS22150;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=SO06_RS22150 NZ_MYDG01000027.1 Protein Homology CDS 36685 38067 . - 0 ID=cds-WP_001029710.1;Parent=gene-SO06_RS22150;Dbxref=GenBank:WP_001029710.1;Name=WP_001029710.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=SO06_RS22150;product=DNA repair protein RadA;protein_id=WP_001029710.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 38151 39119 . - . ID=gene-SO06_RS22155;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=SO06_RS22155 NZ_MYDG01000027.1 Protein Homology CDS 38151 39119 . - 0 ID=cds-WP_001132983.1;Parent=gene-SO06_RS22155;Dbxref=GenBank:WP_001132983.1;Name=WP_001132983.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=SO06_RS22155;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 39236 39880 . + . ID=gene-SO06_RS22165;Name=SO06_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22165 NZ_MYDG01000027.1 Protein Homology CDS 39236 39880 . + 0 ID=cds-WP_000090067.1;Parent=gene-SO06_RS22165;Dbxref=GenBank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=SO06_RS22165;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 39914 40930 . + . ID=gene-SO06_RS22170;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=SO06_RS22170 NZ_MYDG01000027.1 Protein Homology CDS 39914 40930 . + 0 ID=cds-WP_080204283.1;Parent=gene-SO06_RS22170;Dbxref=GenBank:WP_080204283.1;Name=WP_080204283.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=SO06_RS22170;product=lipoate--protein ligase LplA;protein_id=WP_080204283.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 41015 41506 . - . ID=gene-SO06_RS22175;Name=SO06_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22175 NZ_MYDG01000027.1 Protein Homology CDS 41015 41506 . - 0 ID=cds-WP_000073956.1;Parent=gene-SO06_RS22175;Dbxref=GenBank:WP_000073956.1;Name=WP_000073956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073959.1;locus_tag=SO06_RS22175;product=REP-associated tyrosine transposase;protein_id=WP_000073956.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 41696 42415 . - . ID=gene-SO06_RS22180;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=SO06_RS22180 NZ_MYDG01000027.1 Protein Homology CDS 41696 42415 . - 0 ID=cds-WP_000224864.1;Parent=gene-SO06_RS22180;Dbxref=GenBank:WP_000224864.1;Name=WP_000224864.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=SO06_RS22180;product=purine-nucleoside phosphorylase;protein_id=WP_000224864.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 42625 43848 . - . ID=gene-SO06_RS22185;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=SO06_RS22185 NZ_MYDG01000027.1 Protein Homology CDS 42625 43848 . - 0 ID=cds-WP_023232167.1;Parent=gene-SO06_RS22185;Dbxref=GenBank:WP_023232167.1;Name=WP_023232167.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=SO06_RS22185;product=phosphopentomutase;protein_id=WP_023232167.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 43900 45222 . - . ID=gene-SO06_RS22190;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=SO06_RS22190 NZ_MYDG01000027.1 Protein Homology CDS 43900 45222 . - 0 ID=cds-WP_000477838.1;Parent=gene-SO06_RS22190;Dbxref=GenBank:WP_000477838.1;Name=WP_000477838.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=SO06_RS22190;product=thymidine phosphorylase;protein_id=WP_000477838.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 45346 46125 . - . ID=gene-SO06_RS22195;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=SO06_RS22195 NZ_MYDG01000027.1 Protein Homology CDS 45346 46125 . - 0 ID=cds-WP_023232168.1;Parent=gene-SO06_RS22195;Dbxref=GenBank:WP_023232168.1;Name=WP_023232168.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=SO06_RS22195;product=deoxyribose-phosphate aldolase;protein_id=WP_023232168.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 46385 47935 . + . ID=gene-SO06_RS22200;Name=SO06_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22200 NZ_MYDG01000027.1 Protein Homology CDS 46385 47935 . + 0 ID=cds-WP_001111676.1;Parent=gene-SO06_RS22200;Dbxref=GenBank:WP_001111676.1;Name=WP_001111676.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=SO06_RS22200;product=YjjI family glycine radical enzyme;protein_id=WP_001111676.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 47907 48770 . + . ID=gene-SO06_RS22205;Name=SO06_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22205 NZ_MYDG01000027.1 Protein Homology CDS 47907 48770 . + 0 ID=cds-WP_023232169.1;Parent=gene-SO06_RS22205;Dbxref=GenBank:WP_023232169.1;Name=WP_023232169.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=SO06_RS22205;product=YjjW family glycine radical enzyme activase;protein_id=WP_023232169.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 48803 49576 . - . ID=gene-SO06_RS22210;Name=SO06_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22210 NZ_MYDG01000027.1 Protein Homology CDS 48803 49576 . - 0 ID=cds-WP_023232170.1;Parent=gene-SO06_RS22210;Dbxref=GenBank:WP_023232170.1;Name=WP_023232170.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=SO06_RS22210;product=metal-dependent hydrolase;protein_id=WP_023232170.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 49573 50646 . - . ID=gene-SO06_RS22215;Name=SO06_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22215 NZ_MYDG01000027.1 Protein Homology CDS 49573 50646 . - 0 ID=cds-WP_023219087.1;Parent=gene-SO06_RS22215;Dbxref=GenBank:WP_023219087.1;Name=WP_023219087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=SO06_RS22215;product=patatin-like phospholipase family protein;protein_id=WP_023219087.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 50770 50931 . - . ID=gene-SO06_RS22220;Name=SO06_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22220 NZ_MYDG01000027.1 Protein Homology CDS 50770 50931 . - 0 ID=cds-WP_000490276.1;Parent=gene-SO06_RS22220;Dbxref=GenBank:WP_000490276.1;Name=WP_000490276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=SO06_RS22220;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 51060 51677 . - . ID=gene-SO06_RS22225;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=SO06_RS22225 NZ_MYDG01000027.1 Protein Homology CDS 51060 51677 . - 0 ID=cds-WP_000178963.1;Parent=gene-SO06_RS22225;Dbxref=GenBank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=SO06_RS22225;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 52079 53668 . - . ID=gene-SO06_RS22230;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=SO06_RS22230 NZ_MYDG01000027.1 Protein Homology CDS 52079 53668 . - 0 ID=cds-WP_000175965.1;Parent=gene-SO06_RS22230;Dbxref=GenBank:WP_000175965.1;Name=WP_000175965.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=SO06_RS22230;product=peptide chain release factor 3;protein_id=WP_000175965.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 53760 54437 . - . ID=gene-SO06_RS22235;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=SO06_RS22235 NZ_MYDG01000027.1 Protein Homology CDS 53760 54437 . - 0 ID=cds-WP_000870686.1;Parent=gene-SO06_RS22235;Dbxref=GenBank:WP_000870686.1;Name=WP_000870686.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=SO06_RS22235;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870686.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 54459 54905 . - . ID=gene-SO06_RS22240;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=SO06_RS22240 NZ_MYDG01000027.1 Protein Homology CDS 54459 54905 . - 0 ID=cds-WP_001092435.1;Parent=gene-SO06_RS22240;Dbxref=GenBank:WP_001092435.1;Name=WP_001092435.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=SO06_RS22240;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092435.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 54850 55287 . - . ID=gene-SO06_RS22245;Name=SO06_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22245 NZ_MYDG01000027.1 Protein Homology CDS 54850 55287 . - 0 ID=cds-WP_000203996.1;Parent=gene-SO06_RS22245;Dbxref=GenBank:WP_000203996.1;Name=WP_000203996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=SO06_RS22245;product=DNA polymerase III subunit psi;protein_id=WP_000203996.1;transl_table=11 NZ_MYDG01000027.1 RefSeq gene 55390 56418 . + . ID=gene-SO06_RS22250;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=SO06_RS22250 NZ_MYDG01000027.1 Protein Homology CDS 55390 56418 . + 0 ID=cds-WP_020437666.1;Parent=gene-SO06_RS22250;Dbxref=GenBank:WP_020437666.1;Name=WP_020437666.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=SO06_RS22250;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_020437666.1;transl_table=11 ##sequence-region NZ_MYDG01000028.1 1 50498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000028.1 RefSeq region 1 50498 . + . ID=NZ_MYDG01000028.1:1..50498;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000028.1 RefSeq gene 1 1139 . - . ID=gene-SO06_RS22255;Name=SO06_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22255;partial=true;start_range=.,1 NZ_MYDG01000028.1 Protein Homology CDS 1 1139 . - 0 ID=cds-WP_023971457.1;Parent=gene-SO06_RS22255;Dbxref=GenBank:WP_023971457.1;Name=WP_023971457.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=SO06_RS22255;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_023971457.1;start_range=.,1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 1616 2263 . + . ID=gene-SO06_RS22260;Name=SO06_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22260 NZ_MYDG01000028.1 Protein Homology CDS 1616 2263 . + 0 ID=cds-WP_000615840.1;Parent=gene-SO06_RS22260;Dbxref=GenBank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=SO06_RS22260;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 3027 4658 . + . ID=gene-SO06_RS22270;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=SO06_RS22270 NZ_MYDG01000028.1 Protein Homology CDS 3027 4658 . + 0 ID=cds-WP_001535312.1;Parent=gene-SO06_RS22270;Dbxref=GenBank:WP_001535312.1;Name=WP_001535312.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=SO06_RS22270;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001535312.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 4780 5700 . + . ID=gene-SO06_RS22275;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=SO06_RS22275 NZ_MYDG01000028.1 Protein Homology CDS 4780 5700 . + 0 ID=cds-WP_000911097.1;Parent=gene-SO06_RS22275;Dbxref=GenBank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=SO06_RS22275;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 5715 6623 . + . ID=gene-SO06_RS22280;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=SO06_RS22280 NZ_MYDG01000028.1 Protein Homology CDS 5715 6623 . + 0 ID=cds-WP_000979653.1;Parent=gene-SO06_RS22280;Dbxref=GenBank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=SO06_RS22280;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 6635 7642 . + . ID=gene-SO06_RS22285;Name=SO06_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22285 NZ_MYDG01000028.1 Protein Homology CDS 6635 7642 . + 0 ID=cds-WP_000058857.1;Parent=gene-SO06_RS22285;Dbxref=GenBank:WP_000058857.1;Name=WP_000058857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=SO06_RS22285;product=ABC transporter ATP-binding protein;protein_id=WP_000058857.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 7639 8643 . + . ID=gene-SO06_RS22290;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=SO06_RS22290 NZ_MYDG01000028.1 Protein Homology CDS 7639 8643 . + 0 ID=cds-WP_000994696.1;Parent=gene-SO06_RS22290;Dbxref=GenBank:WP_000994696.1;Name=WP_000994696.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=SO06_RS22290;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994696.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 8691 9527 . + . ID=gene-SO06_RS22295;Name=SO06_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22295 NZ_MYDG01000028.1 Protein Homology CDS 8691 9527 . + 0 ID=cds-WP_000059074.1;Parent=gene-SO06_RS22295;Dbxref=GenBank:WP_000059074.1;Name=WP_000059074.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=SO06_RS22295;product=ion transporter;protein_id=WP_000059074.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 9575 9904 . - . ID=gene-SO06_RS22300;Name=SO06_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22300 NZ_MYDG01000028.1 Protein Homology CDS 9575 9904 . - 0 ID=cds-WP_000425070.1;Parent=gene-SO06_RS22300;Dbxref=GenBank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=SO06_RS22300;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 9938 11398 . - . ID=gene-SO06_RS22305;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=SO06_RS22305 NZ_MYDG01000028.1 Protein Homology CDS 9938 11398 . - 0 ID=cds-WP_000206886.1;Parent=gene-SO06_RS22305;Dbxref=GenBank:WP_000206886.1;Name=WP_000206886.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=SO06_RS22305;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 11541 11714 . + . ID=gene-SO06_RS25170;Name=SO06_RS25170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25170 NZ_MYDG01000028.1 Protein Homology CDS 11541 11714 . + 0 ID=cds-WP_001531561.1;Parent=gene-SO06_RS25170;Dbxref=GenBank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=SO06_RS25170;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 11758 12054 . - . ID=gene-SO06_RS22310;Name=SO06_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22310 NZ_MYDG01000028.1 Protein Homology CDS 11758 12054 . - 0 ID=cds-WP_000967605.1;Parent=gene-SO06_RS22310;Dbxref=GenBank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=SO06_RS22310;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 12278 13000 . + . ID=gene-SO06_RS22315;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=SO06_RS22315 NZ_MYDG01000028.1 Protein Homology CDS 12278 13000 . + 0 ID=cds-WP_001531563.1;Parent=gene-SO06_RS22315;Dbxref=GenBank:WP_001531563.1;Name=WP_001531563.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=SO06_RS22315;product=TonB system transport protein TonB;protein_id=WP_001531563.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 13060 13461 . - . ID=gene-SO06_RS22320;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=SO06_RS22320 NZ_MYDG01000028.1 Protein Homology CDS 13060 13461 . - 0 ID=cds-WP_000210317.1;Parent=gene-SO06_RS22320;Dbxref=GenBank:WP_000210317.1;Name=WP_000210317.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=SO06_RS22320;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210317.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 13622 14161 . - . ID=gene-SO06_RS22325;Name=SO06_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22325 NZ_MYDG01000028.1 Protein Homology CDS 13622 14161 . - 0 ID=cds-WP_000808682.1;Parent=gene-SO06_RS22325;Dbxref=GenBank:WP_000808682.1;Name=WP_000808682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=SO06_RS22325;product=septation protein A;protein_id=WP_000808682.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 14218 14961 . - . ID=gene-SO06_RS22330;Name=SO06_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22330 NZ_MYDG01000028.1 Protein Homology CDS 14218 14961 . - 0 ID=cds-WP_000028507.1;Parent=gene-SO06_RS22330;Dbxref=GenBank:WP_000028507.1;Name=WP_000028507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=SO06_RS22330;product=YciC family protein;protein_id=WP_000028507.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 14987 15391 . - . ID=gene-SO06_RS22335;Name=SO06_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22335 NZ_MYDG01000028.1 Protein Homology CDS 14987 15391 . - 0 ID=cds-WP_000114954.1;Parent=gene-SO06_RS22335;Dbxref=GenBank:WP_000114954.1;Name=WP_000114954.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=SO06_RS22335;product=YkgJ family cysteine cluster protein;protein_id=WP_000114954.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 15727 16365 . + . ID=gene-SO06_RS22340;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=SO06_RS22340 NZ_MYDG01000028.1 Protein Homology CDS 15727 16365 . + 0 ID=cds-WP_000714799.1;Parent=gene-SO06_RS22340;Dbxref=GenBank:WP_000714799.1;Name=WP_000714799.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=SO06_RS22340;product=outer membrane protein OmpW;protein_id=WP_000714799.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 16447 17325 . - . ID=gene-SO06_RS22345;Name=SO06_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22345 NZ_MYDG01000028.1 Protein Homology CDS 16447 17325 . - 0 ID=cds-WP_000488346.1;Parent=gene-SO06_RS22345;Dbxref=GenBank:WP_000488346.1;Name=WP_000488346.1;Ontology_term=GO:0004096,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=SO06_RS22345;product=manganese catalase family protein;protein_id=WP_000488346.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 17345 17851 . - . ID=gene-SO06_RS22350;Name=SO06_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22350 NZ_MYDG01000028.1 Protein Homology CDS 17345 17851 . - 0 ID=cds-WP_001109977.1;Parent=gene-SO06_RS22350;Dbxref=GenBank:WP_001109977.1;Name=WP_001109977.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=SO06_RS22350;product=ferritin-like domain-containing protein;protein_id=WP_001109977.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 17925 18428 . - . ID=gene-SO06_RS22355;Name=SO06_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22355 NZ_MYDG01000028.1 Protein Homology CDS 17925 18428 . - 0 ID=cds-WP_001022822.1;Parent=gene-SO06_RS22355;Dbxref=GenBank:WP_001022822.1;Name=WP_001022822.1;Ontology_term=GO:0004322,GO:0005506,GO:0046872;gbkey=CDS;go_function=ferroxidase activity|0004322||IEA,iron ion binding|0005506||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=SO06_RS22355;product=YciE/YciF ferroxidase family protein;protein_id=WP_001022822.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 18518 18700 . - . ID=gene-SO06_RS22360;Name=SO06_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22360 NZ_MYDG01000028.1 Protein Homology CDS 18518 18700 . - 0 ID=cds-WP_000807657.1;Parent=gene-SO06_RS22360;Dbxref=GenBank:WP_000807657.1;Name=WP_000807657.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=SO06_RS22360;product=general stress protein;protein_id=WP_000807657.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 19180 19986 . - . ID=gene-SO06_RS22365;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=SO06_RS22365 NZ_MYDG01000028.1 Protein Homology CDS 19180 19986 . - 0 ID=cds-WP_000443029.1;Parent=gene-SO06_RS22365;Dbxref=GenBank:WP_000443029.1;Name=WP_000443029.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=SO06_RS22365;product=tryptophan synthase subunit alpha;protein_id=WP_000443029.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 19986 21179 . - . ID=gene-SO06_RS22370;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=SO06_RS22370 NZ_MYDG01000028.1 Protein Homology CDS 19986 21179 . - 0 ID=cds-WP_000209485.1;Parent=gene-SO06_RS22370;Dbxref=GenBank:WP_000209485.1;Name=WP_000209485.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=SO06_RS22370;product=tryptophan synthase subunit beta;protein_id=WP_000209485.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 21189 22547 . - . ID=gene-SO06_RS22375;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=SO06_RS22375 NZ_MYDG01000028.1 Protein Homology CDS 21189 22547 . - 0 ID=cds-WP_080204284.1;Parent=gene-SO06_RS22375;Dbxref=GenBank:WP_080204284.1;Name=WP_080204284.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=SO06_RS22375;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_080204284.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 22551 24146 . - . ID=gene-SO06_RS22380;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=SO06_RS22380 NZ_MYDG01000028.1 Protein Homology CDS 22551 24146 . - 0 ID=cds-WP_039589657.1;Parent=gene-SO06_RS22380;Dbxref=GenBank:WP_039589657.1;Name=WP_039589657.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=SO06_RS22380;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_039589657.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 24146 25708 . - . ID=gene-SO06_RS22385;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=SO06_RS22385 NZ_MYDG01000028.1 Protein Homology CDS 24146 25708 . - 0 ID=cds-WP_080204285.1;Parent=gene-SO06_RS22385;Dbxref=GenBank:WP_080204285.1;Name=WP_080204285.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=SO06_RS22385;product=anthranilate synthase component I;protein_id=WP_080204285.1;transl_table=11 NZ_MYDG01000028.1 cmsearch sequence_feature 25731 25826 . - . ID=id-NZ_MYDG01000028.1:25731..25826;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_MYDG01000028.1 RefSeq gene 25803 25847 . - . ID=gene-SO06_RS22390;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=SO06_RS22390 NZ_MYDG01000028.1 Protein Homology CDS 25803 25847 . - 0 ID=cds-WP_010989026.1;Parent=gene-SO06_RS22390;Dbxref=GenBank:WP_010989026.1;Name=WP_010989026.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=SO06_RS22390;product=trp operon leader peptide;protein_id=WP_010989026.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 25969 26850 . + . ID=gene-SO06_RS22395;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=SO06_RS22395 NZ_MYDG01000028.1 Protein Homology CDS 25969 26850 . + 0 ID=cds-WP_079835102.1;Parent=gene-SO06_RS22395;Dbxref=GenBank:WP_079835102.1;Name=WP_079835102.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=SO06_RS22395;product=RNase RNM;protein_id=WP_079835102.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 26858 27478 . + . ID=gene-SO06_RS22400;Name=SO06_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22400 NZ_MYDG01000028.1 Protein Homology CDS 26858 27478 . + 0 ID=cds-WP_000077250.1;Parent=gene-SO06_RS22400;Dbxref=GenBank:WP_000077250.1;Name=WP_000077250.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=SO06_RS22400;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_000077250.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 27579 28454 . + . ID=gene-SO06_RS22405;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=SO06_RS22405 NZ_MYDG01000028.1 Protein Homology CDS 27579 28454 . + 0 ID=cds-WP_001291233.1;Parent=gene-SO06_RS22405;Dbxref=GenBank:WP_001291233.1;Name=WP_001291233.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=SO06_RS22405;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 28541 29131 . - . ID=gene-SO06_RS22410;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=SO06_RS22410 NZ_MYDG01000028.1 Protein Homology CDS 28541 29131 . - 0 ID=cds-WP_058107147.1;Parent=gene-SO06_RS22410;Dbxref=GenBank:WP_058107147.1;Name=WP_058107147.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=SO06_RS22410;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_058107147.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 29128 29889 . - . ID=gene-SO06_RS22415;Name=SO06_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22415 NZ_MYDG01000028.1 Protein Homology CDS 29128 29889 . - 0 ID=cds-WP_000559310.1;Parent=gene-SO06_RS22415;Dbxref=GenBank:WP_000559310.1;Name=WP_000559310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=SO06_RS22415;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 30127 31173 . + . ID=gene-SO06_RS22420;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=SO06_RS22420 NZ_MYDG01000028.1 Protein Homology CDS 30127 31173 . + 0 ID=cds-WP_000422082.1;Parent=gene-SO06_RS22420;Dbxref=GenBank:WP_000422082.1;Name=WP_000422082.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=SO06_RS22420;product=protease SohB;protein_id=WP_000422082.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 31215 31466 . - . ID=gene-SO06_RS22425;Name=SO06_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22425 NZ_MYDG01000028.1 Protein Homology CDS 31215 31466 . - 0 ID=cds-WP_000548616.1;Parent=gene-SO06_RS22425;Dbxref=GenBank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=SO06_RS22425;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 31869 34466 . + . ID=gene-SO06_RS22430;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=SO06_RS22430 NZ_MYDG01000028.1 Protein Homology CDS 31869 34466 . + 0 ID=cds-WP_000513593.1;Parent=gene-SO06_RS22430;Dbxref=GenBank:WP_000513593.1;Name=WP_000513593.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=SO06_RS22430;product=type I DNA topoisomerase;protein_id=WP_000513593.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 34878 35852 . + . ID=gene-SO06_RS22435;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=SO06_RS22435 NZ_MYDG01000028.1 Protein Homology CDS 34878 35852 . + 0 ID=cds-WP_023232099.1;Parent=gene-SO06_RS22435;Dbxref=GenBank:WP_023232099.1;Name=WP_023232099.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=SO06_RS22435;product=HTH-type transcriptional regulator CysB;protein_id=WP_023232099.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 36133 36273 . + . ID=gene-SO06_RS22440;Name=SO06_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22440 NZ_MYDG01000028.1 Protein Homology CDS 36133 36273 . + 0 ID=cds-WP_213083417.1;Parent=gene-SO06_RS22440;Dbxref=GenBank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=SO06_RS22440;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 36554 36646 . + . ID=gene-SO06_RS25620;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=SO06_RS25620 NZ_MYDG01000028.1 Protein Homology CDS 36554 36646 . + 0 ID=cds-WP_223156441.1;Parent=gene-SO06_RS25620;Dbxref=GenBank:WP_223156441.1;Name=WP_223156441.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=SO06_RS25620;product=small membrane protein YmiC;protein_id=WP_223156441.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 36829 39504 . + . ID=gene-SO06_RS22450;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=SO06_RS22450 NZ_MYDG01000028.1 Protein Homology CDS 36829 39504 . + 0 ID=cds-WP_023205521.1;Parent=gene-SO06_RS22450;Dbxref=GenBank:WP_023205521.1;Name=WP_023205521.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=SO06_RS22450;product=aconitate hydratase AcnA;protein_id=WP_023205521.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 39560 40150 . - . ID=gene-SO06_RS22455;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=SO06_RS22455 NZ_MYDG01000028.1 Protein Homology CDS 39560 40150 . - 0 ID=cds-WP_001176284.1;Parent=gene-SO06_RS22455;Dbxref=GenBank:WP_001176284.1;Name=WP_001176284.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=SO06_RS22455;product=GTP cyclohydrolase II;protein_id=WP_001176284.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 40346 41110 . + . ID=gene-SO06_RS22460;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=SO06_RS22460 NZ_MYDG01000028.1 Protein Homology CDS 40346 41110 . + 0 ID=cds-WP_000948651.1;Parent=gene-SO06_RS22460;Dbxref=GenBank:WP_000948651.1;Name=WP_000948651.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=SO06_RS22460;product=phosphatidylglycerophosphatase B;protein_id=WP_000948651.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 41260 41568 . + . ID=gene-SO06_RS22470;Name=SO06_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22470 NZ_MYDG01000028.1 Protein Homology CDS 41260 41568 . + 0 ID=cds-WP_000876301.1;Parent=gene-SO06_RS22470;Dbxref=GenBank:WP_000876301.1;Name=WP_000876301.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=SO06_RS22470;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 41575 42744 . + . ID=gene-SO06_RS22475;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=SO06_RS22475 NZ_MYDG01000028.1 Protein Homology CDS 41575 42744 . + 0 ID=cds-WP_000891378.1;Parent=gene-SO06_RS22475;Dbxref=GenBank:WP_000891378.1;Name=WP_000891378.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=SO06_RS22475;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891378.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 42935 43672 . + . ID=gene-SO06_RS22480;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=SO06_RS22480 NZ_MYDG01000028.1 Protein Homology CDS 42935 43672 . + 0 ID=cds-WP_023193233.1;Parent=gene-SO06_RS22480;Dbxref=GenBank:WP_023193233.1;Name=WP_023193233.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=SO06_RS22480;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_023193233.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 43672 43998 . + . ID=gene-SO06_RS22485;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=SO06_RS22485 NZ_MYDG01000028.1 Protein Homology CDS 43672 43998 . + 0 ID=cds-WP_001285199.1;Parent=gene-SO06_RS22485;Dbxref=GenBank:WP_001285199.1;Name=WP_001285199.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=SO06_RS22485;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285199.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 44118 44336 . - . ID=gene-SO06_RS22490;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=SO06_RS22490 NZ_MYDG01000028.1 Protein Homology CDS 44118 44336 . - 0 ID=cds-WP_000481166.1;Parent=gene-SO06_RS22490;Dbxref=GenBank:WP_000481166.1;Name=WP_000481166.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=SO06_RS22490;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000481166.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 44595 45347 . - . ID=gene-SO06_RS22495;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;gene_synonym=deoT;locus_tag=SO06_RS22495 NZ_MYDG01000028.1 Protein Homology CDS 44595 45347 . - 0 ID=cds-WP_001088593.1;Parent=gene-SO06_RS22495;Dbxref=GenBank:WP_001088593.1;Name=WP_001088593.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=SO06_RS22495;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088593.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 45434 45613 . - . ID=gene-SO06_RS22500;Name=SO06_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22500 NZ_MYDG01000028.1 Protein Homology CDS 45434 45613 . - 0 ID=cds-WP_001279854.1;Parent=gene-SO06_RS22500;Dbxref=GenBank:WP_001279854.1;Name=WP_001279854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=SO06_RS22500;product=YciZ family protein;protein_id=WP_001279854.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 45735 47717 . - . ID=gene-SO06_RS22505;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=SO06_RS22505 NZ_MYDG01000028.1 Protein Homology CDS 45735 47717 . - 0 ID=cds-WP_023204788.1;Parent=gene-SO06_RS22505;Dbxref=GenBank:WP_023204788.1;Name=WP_023204788.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=SO06_RS22505;product=cyclic di-GMP phosphodiesterase;protein_id=WP_023204788.1;transl_table=11 NZ_MYDG01000028.1 RefSeq gene 47979 49913 . - . ID=gene-SO06_RS22515;Name=SO06_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22515 NZ_MYDG01000028.1 Protein Homology CDS 47979 49913 . - 0 ID=cds-WP_000485041.1;Parent=gene-SO06_RS22515;Dbxref=GenBank:WP_000485041.1;Name=WP_000485041.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=SO06_RS22515;product=exoribonuclease II;protein_id=WP_000485041.1;transl_table=11 NZ_MYDG01000028.1 RefSeq pseudogene 50002 50498 . - . ID=gene-SO06_RS22520;Name=SO06_RS22520;end_range=50498,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS22520;partial=true;pseudo=true NZ_MYDG01000028.1 Protein Homology CDS 50002 50498 . - 2 ID=cds-SO06_RS22520;Parent=gene-SO06_RS22520;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=50498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000434200.1;locus_tag=SO06_RS22520;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;transl_table=11 ##sequence-region NZ_MYDG01000029.1 1 46037 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000029.1 RefSeq region 1 46037 . + . ID=NZ_MYDG01000029.1:1..46037;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000029.1 RefSeq pseudogene 1 679 . - . ID=gene-SO06_RS22525;Name=SO06_RS22525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS22525;partial=true;pseudo=true;start_range=.,1 NZ_MYDG01000029.1 Protein Homology CDS 1 679 . - 0 ID=cds-SO06_RS22525;Parent=gene-SO06_RS22525;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=SO06_RS22525;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;start_range=.,1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 695 937 . - . ID=gene-SO06_RS22530;Name=SO06_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22530 NZ_MYDG01000029.1 Protein Homology CDS 695 937 . - 0 ID=cds-WP_000180123.1;Parent=gene-SO06_RS22530;Dbxref=GenBank:WP_000180123.1;Name=WP_000180123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462263.1;locus_tag=SO06_RS22530;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_000180123.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 1094 1711 . - . ID=gene-SO06_RS22535;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=SO06_RS22535 NZ_MYDG01000029.1 Protein Homology CDS 1094 1711 . - 0 ID=cds-WP_000162405.1;Parent=gene-SO06_RS22535;Dbxref=GenBank:WP_000162405.1;Name=WP_000162405.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=SO06_RS22535;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162405.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 1711 2610 . - . ID=gene-SO06_RS22540;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=SO06_RS22540 NZ_MYDG01000029.1 Protein Homology CDS 1711 2610 . - 0 ID=cds-WP_000045350.1;Parent=gene-SO06_RS22540;Dbxref=GenBank:WP_000045350.1;Name=WP_000045350.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=SO06_RS22540;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045350.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 2643 3911 . - . ID=gene-SO06_RS22545;Name=SO06_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22545 NZ_MYDG01000029.1 Protein Homology CDS 2643 3911 . - 0 ID=cds-WP_000433390.1;Parent=gene-SO06_RS22545;Dbxref=GenBank:WP_000433390.1;Name=WP_000433390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=SO06_RS22545;product=SLC13 family permease;protein_id=WP_000433390.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 4122 4787 . - . ID=gene-SO06_RS22550;Name=SO06_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22550 NZ_MYDG01000029.1 Protein Homology CDS 4122 4787 . - 0 ID=cds-WP_001171581.1;Parent=gene-SO06_RS22550;Dbxref=GenBank:WP_001171581.1;Name=WP_001171581.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=SO06_RS22550;product=GntR family transcriptional regulator;protein_id=WP_001171581.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 4774 5403 . - . ID=gene-SO06_RS22555;Name=SO06_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22555 NZ_MYDG01000029.1 Protein Homology CDS 4774 5403 . - 0 ID=cds-WP_000723776.1;Parent=gene-SO06_RS22555;Dbxref=GenBank:WP_000723776.1;Name=WP_000723776.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=SO06_RS22555;product=GntR family transcriptional regulator;protein_id=WP_000723776.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 5523 6461 . - . ID=gene-SO06_RS22560;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=SO06_RS22560 NZ_MYDG01000029.1 Protein Homology CDS 5523 6461 . - 0 ID=cds-WP_000861586.1;Parent=gene-SO06_RS22560;Dbxref=GenBank:WP_000861586.1;Name=WP_000861586.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=SO06_RS22560;product=malate dehydrogenase;protein_id=WP_000861586.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 6876 7346 . + . ID=gene-SO06_RS22565;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=SO06_RS22565 NZ_MYDG01000029.1 Protein Homology CDS 6876 7346 . + 0 ID=cds-WP_001257852.1;Parent=gene-SO06_RS22565;Dbxref=GenBank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=SO06_RS22565;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 7711 7974 . + . ID=gene-SO06_RS22570;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=SO06_RS22570 NZ_MYDG01000029.1 Protein Homology CDS 7711 7974 . + 0 ID=cds-WP_000695693.1;Parent=gene-SO06_RS22570;Dbxref=GenBank:WP_000695693.1;Name=WP_000695693.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=SO06_RS22570;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695693.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 8078 8344 . + . ID=gene-SO06_RS22575;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=SO06_RS22575 NZ_MYDG01000029.1 Protein Homology CDS 8078 8344 . + 0 ID=cds-WP_000853277.1;Parent=gene-SO06_RS22575;Dbxref=GenBank:WP_000853277.1;Name=WP_000853277.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=SO06_RS22575;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_000853277.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 8404 8676 . - . ID=gene-SO06_RS22580;Name=SO06_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22580 NZ_MYDG01000029.1 Protein Homology CDS 8404 8676 . - 0 ID=cds-WP_001103887.1;Parent=gene-SO06_RS22580;Dbxref=GenBank:WP_001103887.1;Name=WP_001103887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=SO06_RS22580;product=barstar family protein;protein_id=WP_001103887.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 8848 10815 . - . ID=gene-SO06_RS22585;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=SO06_RS22585 NZ_MYDG01000029.1 Protein Homology CDS 8848 10815 . - 0 ID=cds-WP_000510913.1;Parent=gene-SO06_RS22585;Dbxref=GenBank:WP_000510913.1;Name=WP_000510913.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=SO06_RS22585;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510913.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 10821 11753 . - . ID=gene-SO06_RS22590;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=SO06_RS22590 NZ_MYDG01000029.1 Protein Homology CDS 10821 11753 . - 0 ID=cds-WP_000855134.1;Parent=gene-SO06_RS22590;Dbxref=GenBank:WP_000855134.1;Name=WP_000855134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=SO06_RS22590;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855134.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 11761 11964 . - . ID=gene-SO06_RS22595;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=SO06_RS22595 NZ_MYDG01000029.1 Protein Homology CDS 11761 11964 . - 0 ID=cds-WP_000051840.1;Parent=gene-SO06_RS22595;Dbxref=GenBank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=SO06_RS22595;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 12146 13075 . + . ID=gene-SO06_RS22600;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=SO06_RS22600 NZ_MYDG01000029.1 Protein Homology CDS 12146 13075 . + 0 ID=cds-WP_000440300.1;Parent=gene-SO06_RS22600;Dbxref=GenBank:WP_000440300.1;Name=WP_000440300.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=SO06_RS22600;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440300.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 13197 14642 . - . ID=gene-SO06_RS22605;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=SO06_RS22605 NZ_MYDG01000029.1 Protein Homology CDS 13197 14642 . - 0 ID=cds-WP_080204286.1;Parent=gene-SO06_RS22605;Dbxref=GenBank:WP_080204286.1;Name=WP_080204286.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=SO06_RS22605;product=metalloprotease TldD;protein_id=WP_080204286.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 14787 18587 . - . ID=gene-SO06_RS22610;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=SO06_RS22610 NZ_MYDG01000029.1 Protein Homology CDS 14787 18587 . - 0 ID=cds-WP_001253502.1;Parent=gene-SO06_RS22610;Dbxref=GenBank:WP_001253502.1;Name=WP_001253502.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=SO06_RS22610;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253502.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 18694 20163 . - . ID=gene-SO06_RS22615;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=SO06_RS22615 NZ_MYDG01000029.1 Protein Homology CDS 18694 20163 . - 0 ID=cds-WP_000123188.1;Parent=gene-SO06_RS22615;Dbxref=GenBank:WP_000123188.1;Name=WP_000123188.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=SO06_RS22615;product=ribonuclease G;protein_id=WP_000123188.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 20153 20746 . - . ID=gene-SO06_RS22620;Name=SO06_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22620 NZ_MYDG01000029.1 Protein Homology CDS 20153 20746 . - 0 ID=cds-WP_000210307.1;Parent=gene-SO06_RS22620;Dbxref=GenBank:WP_000210307.1;Name=WP_000210307.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=SO06_RS22620;product=Maf family protein;protein_id=WP_000210307.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 20755 21243 . - . ID=gene-SO06_RS22625;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=SO06_RS22625 NZ_MYDG01000029.1 Protein Homology CDS 20755 21243 . - 0 ID=cds-WP_000179403.1;Parent=gene-SO06_RS22625;Dbxref=GenBank:WP_000179403.1;Name=WP_000179403.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=SO06_RS22625;product=rod shape-determining protein MreD;protein_id=WP_000179403.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 21246 22298 . - . ID=gene-SO06_RS22630;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=SO06_RS22630 NZ_MYDG01000029.1 Protein Homology CDS 21246 22298 . - 0 ID=cds-WP_000802538.1;Parent=gene-SO06_RS22630;Dbxref=GenBank:WP_000802538.1;Name=WP_000802538.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=SO06_RS22630;product=rod shape-determining protein MreC;protein_id=WP_000802538.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 22363 23406 . - . ID=gene-SO06_RS22635;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=SO06_RS22635 NZ_MYDG01000029.1 Protein Homology CDS 22363 23406 . - 0 ID=cds-WP_000913396.1;Parent=gene-SO06_RS22635;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=SO06_RS22635;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 23714 25654 . - . ID=gene-SO06_RS22650;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=SO06_RS22650 NZ_MYDG01000029.1 Protein Homology CDS 23714 25654 . - 0 ID=cds-WP_001241381.1;Parent=gene-SO06_RS22650;Dbxref=GenBank:WP_001241381.1;Name=WP_001241381.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=SO06_RS22650;product=RNase E specificity factor CsrD;protein_id=WP_001241381.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 25858 26832 . + . ID=gene-SO06_RS22655;Name=acuI;gbkey=Gene;gene=acuI;gene_biotype=protein_coding;locus_tag=SO06_RS22655 NZ_MYDG01000029.1 Protein Homology CDS 25858 26832 . + 0 ID=cds-WP_001148240.1;Parent=gene-SO06_RS22655;Dbxref=GenBank:WP_001148240.1;Name=WP_001148240.1;gbkey=CDS;gene=acuI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=SO06_RS22655;product=acrylyl-CoA reductase (NADPH);protein_id=WP_001148240.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 26945 27949 . + . ID=gene-SO06_RS22660;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=SO06_RS22660 NZ_MYDG01000029.1 Protein Homology CDS 26945 27949 . + 0 ID=cds-WP_000723876.1;Parent=gene-SO06_RS22660;Dbxref=GenBank:WP_000723876.1;Name=WP_000723876.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=SO06_RS22660;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000723876.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 27950 28549 . + . ID=gene-SO06_RS22665;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=SO06_RS22665 NZ_MYDG01000029.1 Protein Homology CDS 27950 28549 . + 0 ID=cds-WP_001240053.1;Parent=gene-SO06_RS22665;Dbxref=GenBank:WP_001240053.1;Name=WP_001240053.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=SO06_RS22665;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240053.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 28942 29412 . + . ID=gene-SO06_RS22670;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=SO06_RS22670 NZ_MYDG01000029.1 Protein Homology CDS 28942 29412 . + 0 ID=cds-WP_000354626.1;Parent=gene-SO06_RS22670;Dbxref=GenBank:WP_000354626.1;Name=WP_000354626.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=SO06_RS22670;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354626.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 29423 30772 . + . ID=gene-SO06_RS22675;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=SO06_RS22675 NZ_MYDG01000029.1 Protein Homology CDS 29423 30772 . + 0 ID=cds-WP_000884627.1;Parent=gene-SO06_RS22675;Dbxref=GenBank:WP_000884627.1;Name=WP_000884627.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=SO06_RS22675;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 30881 31123 . + . ID=gene-SO06_RS22680;Name=SO06_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22680 NZ_MYDG01000029.1 Protein Homology CDS 30881 31123 . + 0 ID=cds-WP_000340018.1;Parent=gene-SO06_RS22680;Dbxref=GenBank:WP_000340018.1;Name=WP_000340018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=SO06_RS22680;product=YhdT family protein;protein_id=WP_000340018.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 31113 32564 . + . ID=gene-SO06_RS22685;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=SO06_RS22685 NZ_MYDG01000029.1 Protein Homology CDS 31113 32564 . + 0 ID=cds-WP_001175682.1;Parent=gene-SO06_RS22685;Dbxref=GenBank:WP_001175682.1;Name=WP_001175682.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=SO06_RS22685;product=sodium/pantothenate symporter;protein_id=WP_001175682.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 32576 33457 . + . ID=gene-SO06_RS22690;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=SO06_RS22690 NZ_MYDG01000029.1 Protein Homology CDS 32576 33457 . + 0 ID=cds-WP_001145849.1;Parent=gene-SO06_RS22690;Dbxref=GenBank:WP_001145849.1;Name=WP_001145849.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=SO06_RS22690;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145849.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 34118 35083 . + . ID=gene-SO06_RS22695;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=SO06_RS22695 NZ_MYDG01000029.1 Protein Homology CDS 34118 35083 . + 0 ID=cds-WP_001219664.1;Parent=gene-SO06_RS22695;Dbxref=GenBank:WP_001219664.1;Name=WP_001219664.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=SO06_RS22695;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219664.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 35109 35405 . + . ID=gene-SO06_RS22700;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=SO06_RS22700 NZ_MYDG01000029.1 Protein Homology CDS 35109 35405 . + 0 ID=cds-WP_000462905.1;Parent=gene-SO06_RS22700;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=SO06_RS22700;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 35491 36375 . + . ID=gene-SO06_RS22705;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=SO06_RS22705 NZ_MYDG01000029.1 Protein Homology CDS 35491 36375 . + 0 ID=cds-WP_000642611.1;Parent=gene-SO06_RS22705;Dbxref=GenBank:WP_000642611.1;Name=WP_000642611.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=SO06_RS22705;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 36458 36622 . + . ID=gene-SO06_RS22710;Name=SO06_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22710 NZ_MYDG01000029.1 Protein Homology CDS 36458 36622 . + 0 ID=cds-WP_000620015.1;Parent=gene-SO06_RS22710;Dbxref=GenBank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=SO06_RS22710;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 36773 38872 . + . ID=gene-SO06_RS22715;Name=SO06_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22715 NZ_MYDG01000029.1 Protein Homology CDS 36773 38872 . + 0 ID=cds-WP_023231834.1;Parent=gene-SO06_RS22715;Dbxref=GenBank:WP_023231834.1;Name=WP_023231834.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=SO06_RS22715;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_023231834.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 38875 39537 . - . ID=gene-SO06_RS22720;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=SO06_RS22720 NZ_MYDG01000029.1 Protein Homology CDS 38875 39537 . - 0 ID=cds-WP_001085725.1;Parent=gene-SO06_RS22720;Dbxref=GenBank:WP_001085725.1;Name=WP_001085725.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=SO06_RS22720;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_001085725.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 39951 41108 . + . ID=gene-SO06_RS22725;Name=SO06_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22725 NZ_MYDG01000029.1 Protein Homology CDS 39951 41108 . + 0 ID=cds-WP_000160383.1;Parent=gene-SO06_RS22725;Dbxref=GenBank:WP_000160383.1;Name=WP_000160383.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=SO06_RS22725;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_000160383.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 41120 44233 . + . ID=gene-SO06_RS22730;Name=SO06_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22730 NZ_MYDG01000029.1 Protein Homology CDS 41120 44233 . + 0 ID=cds-WP_001273283.1;Parent=gene-SO06_RS22730;Dbxref=GenBank:WP_001273283.1;Name=WP_001273283.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=SO06_RS22730;product=efflux RND transporter permease subunit;protein_id=WP_001273283.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 44470 44691 . + . ID=gene-SO06_RS22735;Name=SO06_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22735 NZ_MYDG01000029.1 Protein Homology CDS 44470 44691 . + 0 ID=cds-WP_000825645.1;Parent=gene-SO06_RS22735;Dbxref=GenBank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=SO06_RS22735;product=membrane protein;protein_id=WP_000825645.1;transl_table=11 NZ_MYDG01000029.1 RefSeq gene 45688 45803 . - . ID=gene-SO06_RS22745;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=SO06_RS22745 NZ_MYDG01000029.1 cmsearch rRNA 45688 45803 . - . ID=rna-SO06_RS22745;Parent=gene-SO06_RS22745;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS22745;product=5S ribosomal RNA NZ_MYDG01000029.1 cmsearch exon 45688 45803 . - . ID=exon-SO06_RS22745-1;Parent=rna-SO06_RS22745;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS22745;product=5S ribosomal RNA NZ_MYDG01000029.1 RefSeq gene 45843 45918 . - . ID=gene-SO06_RS22750;Name=SO06_RS22750;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS22750 NZ_MYDG01000029.1 tRNAscan-SE tRNA 45843 45918 . - . ID=rna-SO06_RS22750;Parent=gene-SO06_RS22750;anticodon=(pos:complement(45883..45885));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS22750;product=tRNA-Thr NZ_MYDG01000029.1 tRNAscan-SE exon 45843 45918 . - . ID=exon-SO06_RS22750-1;Parent=rna-SO06_RS22750;anticodon=(pos:complement(45883..45885));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS22750;product=tRNA-Thr NZ_MYDG01000029.1 RefSeq gene 45933 46037 . - . ID=gene-SO06_RS22755;Name=rrf;end_range=46037,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=SO06_RS22755;partial=true NZ_MYDG01000029.1 cmsearch rRNA 45933 46037 . - . ID=rna-SO06_RS22755;Parent=gene-SO06_RS22755;Dbxref=RFAM:RF00001;end_range=46037,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS22755;partial=true;product=5S ribosomal RNA NZ_MYDG01000029.1 cmsearch exon 45933 46037 . - . ID=exon-SO06_RS22755-1;Parent=rna-SO06_RS22755;Dbxref=RFAM:RF00001;end_range=46037,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS22755;partial=true;product=5S ribosomal RNA ##sequence-region NZ_MYDG01000002.1 1 484712 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000002.1 RefSeq region 1 484712 . + . ID=NZ_MYDG01000002.1:1..484712;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000002.1 RefSeq gene 102 176 . + . ID=gene-SO06_RS03530;Name=SO06_RS03530;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS03530 NZ_MYDG01000002.1 tRNAscan-SE tRNA 102 176 . + . ID=rna-SO06_RS03530;Parent=gene-SO06_RS03530;anticodon=(pos:134..136);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03530;product=tRNA-Gln NZ_MYDG01000002.1 tRNAscan-SE exon 102 176 . + . ID=exon-SO06_RS03530-1;Parent=rna-SO06_RS03530;anticodon=(pos:134..136);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03530;product=tRNA-Gln NZ_MYDG01000002.1 RefSeq gene 192 268 . + . ID=gene-SO06_RS03535;Name=SO06_RS03535;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS03535 NZ_MYDG01000002.1 tRNAscan-SE tRNA 192 268 . + . ID=rna-SO06_RS03535;Parent=gene-SO06_RS03535;anticodon=(pos:226..228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03535;product=tRNA-Met NZ_MYDG01000002.1 tRNAscan-SE exon 192 268 . + . ID=exon-SO06_RS03535-1;Parent=rna-SO06_RS03535;anticodon=(pos:226..228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03535;product=tRNA-Met NZ_MYDG01000002.1 RefSeq gene 315 389 . + . ID=gene-SO06_RS03540;Name=SO06_RS03540;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS03540 NZ_MYDG01000002.1 tRNAscan-SE tRNA 315 389 . + . ID=rna-SO06_RS03540;Parent=gene-SO06_RS03540;anticodon=(pos:347..349);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03540;product=tRNA-Gln NZ_MYDG01000002.1 tRNAscan-SE exon 315 389 . + . ID=exon-SO06_RS03540-1;Parent=rna-SO06_RS03540;anticodon=(pos:347..349);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03540;product=tRNA-Gln NZ_MYDG01000002.1 RefSeq gene 433 507 . + . ID=gene-SO06_RS03545;Name=SO06_RS03545;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS03545 NZ_MYDG01000002.1 tRNAscan-SE tRNA 433 507 . + . ID=rna-SO06_RS03545;Parent=gene-SO06_RS03545;anticodon=(pos:465..467);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03545;product=tRNA-Gln NZ_MYDG01000002.1 tRNAscan-SE exon 433 507 . + . ID=exon-SO06_RS03545-1;Parent=rna-SO06_RS03545;anticodon=(pos:465..467);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS03545;product=tRNA-Gln NZ_MYDG01000002.1 RefSeq gene 638 1813 . - . ID=gene-SO06_RS03550;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=SO06_RS03550 NZ_MYDG01000002.1 Protein Homology CDS 638 1813 . - 0 ID=cds-WP_023231441.1;Parent=gene-SO06_RS03550;Dbxref=GenBank:WP_023231441.1;Name=WP_023231441.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=SO06_RS03550;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_023231441.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 1957 3381 . + . ID=gene-SO06_RS03555;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=SO06_RS03555 NZ_MYDG01000002.1 Protein Homology CDS 1957 3381 . + 0 ID=cds-WP_001519200.1;Parent=gene-SO06_RS03555;Dbxref=GenBank:WP_001519200.1;Name=WP_001519200.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=SO06_RS03555;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_001519200.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 3586 4632 . + . ID=gene-SO06_RS03560;Name=SO06_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03560 NZ_MYDG01000002.1 Protein Homology CDS 3586 4632 . + 0 ID=cds-WP_001018045.1;Parent=gene-SO06_RS03560;Dbxref=GenBank:WP_001018045.1;Name=WP_001018045.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=SO06_RS03560;product=PhoH family protein;protein_id=WP_001018045.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 4629 5102 . + . ID=gene-SO06_RS03565;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=SO06_RS03565 NZ_MYDG01000002.1 Protein Homology CDS 4629 5102 . + 0 ID=cds-WP_000084479.1;Parent=gene-SO06_RS03565;Dbxref=GenBank:WP_000084479.1;Name=WP_000084479.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=SO06_RS03565;product=rRNA maturation RNase YbeY;protein_id=WP_000084479.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 5260 6138 . + . ID=gene-SO06_RS03570;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=SO06_RS03570 NZ_MYDG01000002.1 Protein Homology CDS 5260 6138 . + 0 ID=cds-WP_001278615.1;Parent=gene-SO06_RS03570;Dbxref=GenBank:WP_001278615.1;Name=WP_001278615.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=SO06_RS03570;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278615.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 6158 7696 . + . ID=gene-SO06_RS03575;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=SO06_RS03575 NZ_MYDG01000002.1 Protein Homology CDS 6158 7696 . + 0 ID=cds-WP_080204172.1;Parent=gene-SO06_RS03575;Dbxref=GenBank:WP_080204172.1;Name=WP_080204172.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=SO06_RS03575;product=apolipoprotein N-acyltransferase;protein_id=WP_080204172.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 8051 8959 . + . ID=gene-SO06_RS03585;Name=SO06_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03585 NZ_MYDG01000002.1 Protein Homology CDS 8051 8959 . + 0 ID=cds-WP_001518176.1;Parent=gene-SO06_RS03585;Dbxref=GenBank:WP_001518176.1;Name=WP_001518176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=SO06_RS03585;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001518176.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 9119 9859 . + . ID=gene-SO06_RS03590;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=SO06_RS03590 NZ_MYDG01000002.1 Protein Homology CDS 9119 9859 . + 0 ID=cds-WP_000020930.1;Parent=gene-SO06_RS03590;Dbxref=GenBank:WP_000020930.1;Name=WP_000020930.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=SO06_RS03590;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020930.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 9859 10533 . + . ID=gene-SO06_RS03595;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=SO06_RS03595 NZ_MYDG01000002.1 Protein Homology CDS 9859 10533 . + 0 ID=cds-WP_000272794.1;Parent=gene-SO06_RS03595;Dbxref=GenBank:WP_000272794.1;Name=WP_000272794.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=SO06_RS03595;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272794.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 10533 11258 . + . ID=gene-SO06_RS03600;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=SO06_RS03600 NZ_MYDG01000002.1 Protein Homology CDS 10533 11258 . + 0 ID=cds-WP_000631369.1;Parent=gene-SO06_RS03600;Dbxref=GenBank:WP_000631369.1;Name=WP_000631369.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=SO06_RS03600;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631369.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 11375 12310 . + . ID=gene-SO06_RS03605;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=SO06_RS03605 NZ_MYDG01000002.1 Protein Homology CDS 11375 12310 . + 0 ID=cds-WP_001207422.1;Parent=gene-SO06_RS03605;Dbxref=GenBank:WP_001207422.1;Name=WP_001207422.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=SO06_RS03605;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207422.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 12342 13580 . + . ID=gene-SO06_RS03610;Name=SO06_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03610 NZ_MYDG01000002.1 Protein Homology CDS 12342 13580 . + 0 ID=cds-WP_023231443.1;Parent=gene-SO06_RS03610;Dbxref=GenBank:WP_023231443.1;Name=WP_023231443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=SO06_RS03610;product=hypothetical protein;protein_id=WP_023231443.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 13656 15335 . + . ID=gene-SO06_RS03615;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=SO06_RS03615 NZ_MYDG01000002.1 Protein Homology CDS 13656 15335 . + 0 ID=cds-WP_023231444.1;Parent=gene-SO06_RS03615;Dbxref=GenBank:WP_023231444.1;Name=WP_023231444.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=SO06_RS03615;product=molecular chaperone HscC;protein_id=WP_023231444.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 15357 16820 . - . ID=gene-SO06_RS03620;Name=SO06_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03620 NZ_MYDG01000002.1 Protein Homology CDS 15357 16820 . - 0 ID=cds-WP_023231445.1;Parent=gene-SO06_RS03620;Dbxref=GenBank:WP_023231445.1;Name=WP_023231445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=SO06_RS03620;product=J domain-containing protein;protein_id=WP_023231445.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 16817 17521 . - . ID=gene-SO06_RS03625;Name=SO06_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03625 NZ_MYDG01000002.1 Protein Homology CDS 16817 17521 . - 0 ID=cds-WP_023206848.1;Parent=gene-SO06_RS03625;Dbxref=GenBank:WP_023206848.1;Name=WP_023206848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=SO06_RS03625;product=DUF1266 domain-containing protein;protein_id=WP_023206848.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 17533 18966 . - . ID=gene-SO06_RS03630;Name=SO06_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03630 NZ_MYDG01000002.1 Protein Homology CDS 17533 18966 . - 0 ID=cds-WP_023231446.1;Parent=gene-SO06_RS03630;Dbxref=GenBank:WP_023231446.1;Name=WP_023231446.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=SO06_RS03630;product=J domain-containing protein;protein_id=WP_023231446.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 18963 19670 . - . ID=gene-SO06_RS03635;Name=SO06_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03635 NZ_MYDG01000002.1 Protein Homology CDS 18963 19670 . - 0 ID=cds-WP_023137867.1;Parent=gene-SO06_RS03635;Dbxref=GenBank:WP_023137867.1;Name=WP_023137867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=SO06_RS03635;product=DUF1266 domain-containing protein;protein_id=WP_023137867.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 19795 20790 . + . ID=gene-SO06_RS03640;Name=SO06_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03640 NZ_MYDG01000002.1 Protein Homology CDS 19795 20790 . + 0 ID=cds-WP_001016627.1;Parent=gene-SO06_RS03640;Dbxref=GenBank:WP_001016627.1;Name=WP_001016627.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=SO06_RS03640;product=tetratricopeptide repeat protein;protein_id=WP_001016627.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 20829 21302 . - . ID=gene-SO06_RS03645;Name=SO06_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03645 NZ_MYDG01000002.1 Protein Homology CDS 20829 21302 . - 0 ID=cds-WP_001044885.1;Parent=gene-SO06_RS03645;Dbxref=GenBank:WP_001044885.1;Name=WP_001044885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=SO06_RS03645;product=zinc ribbon-containing protein;protein_id=WP_001044885.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 21395 23323 . - . ID=gene-SO06_RS03650;Name=SO06_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03650 NZ_MYDG01000002.1 Protein Homology CDS 21395 23323 . - 0 ID=cds-WP_017441664.1;Parent=gene-SO06_RS03650;Dbxref=GenBank:WP_017441664.1;Name=WP_017441664.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=SO06_RS03650;product=sigma-54 interaction domain-containing protein;protein_id=WP_017441664.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 23391 24344 . - . ID=gene-SO06_RS03655;Name=SO06_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03655 NZ_MYDG01000002.1 Protein Homology CDS 23391 24344 . - 0 ID=cds-WP_023231447.1;Parent=gene-SO06_RS03655;Dbxref=GenBank:WP_023231447.1;Name=WP_023231447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=SO06_RS03655;product=2-keto-3-deoxygluconate permease;protein_id=WP_023231447.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 24394 25566 . - . ID=gene-SO06_RS03660;Name=SO06_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03660 NZ_MYDG01000002.1 Protein Homology CDS 24394 25566 . - 0 ID=cds-WP_001670689.1;Parent=gene-SO06_RS03660;Dbxref=GenBank:WP_001670689.1;Name=WP_001670689.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=SO06_RS03660;product=UxaA family hydrolase;protein_id=WP_001670689.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 25583 25924 . - . ID=gene-SO06_RS03665;Name=SO06_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03665 NZ_MYDG01000002.1 Protein Homology CDS 25583 25924 . - 0 ID=cds-WP_001574029.1;Parent=gene-SO06_RS03665;Dbxref=GenBank:WP_001574029.1;Name=WP_001574029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=SO06_RS03665;product=UxaA family hydrolase;protein_id=WP_001574029.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 26161 28743 . + . ID=gene-SO06_RS03670;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=SO06_RS03670 NZ_MYDG01000002.1 Protein Homology CDS 26161 28743 . + 0 ID=cds-WP_001157912.1;Parent=gene-SO06_RS03670;Dbxref=GenBank:WP_001157912.1;Name=WP_001157912.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=SO06_RS03670;product=leucine--tRNA ligase;protein_id=WP_001157912.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 28758 29348 . + . ID=gene-SO06_RS03675;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=SO06_RS03675 NZ_MYDG01000002.1 Protein Homology CDS 28758 29348 . + 0 ID=cds-WP_001269950.1;Parent=gene-SO06_RS03675;Dbxref=GenBank:WP_001269950.1;Name=WP_001269950.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=SO06_RS03675;product=LPS assembly lipoprotein LptE;protein_id=WP_001269950.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 29348 30379 . + . ID=gene-SO06_RS03680;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=SO06_RS03680 NZ_MYDG01000002.1 Protein Homology CDS 29348 30379 . + 0 ID=cds-WP_001728672.1;Parent=gene-SO06_RS03680;Dbxref=GenBank:WP_001728672.1;Name=WP_001728672.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=SO06_RS03680;product=DNA polymerase III subunit delta;protein_id=WP_001728672.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 30381 31022 . + . ID=gene-SO06_RS03685;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=SO06_RS03685 NZ_MYDG01000002.1 Protein Homology CDS 30381 31022 . + 0 ID=cds-WP_001518902.1;Parent=gene-SO06_RS03685;Dbxref=GenBank:WP_001518902.1;Name=WP_001518902.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=SO06_RS03685;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001518902.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 30997 32091 . - . ID=gene-SO06_RS03690;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=SO06_RS03690 NZ_MYDG01000002.1 Protein Homology CDS 30997 32091 . - 0 ID=cds-WP_023231448.1;Parent=gene-SO06_RS03690;Dbxref=GenBank:WP_023231448.1;Name=WP_023231448.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=SO06_RS03690;product=threonine-phosphate decarboxylase CobD;protein_id=WP_023231448.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 32188 32796 . + . ID=gene-SO06_RS03695;Name=SO06_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03695 NZ_MYDG01000002.1 Protein Homology CDS 32188 32796 . + 0 ID=cds-WP_001241922.1;Parent=gene-SO06_RS03695;Dbxref=GenBank:WP_001241922.1;Name=WP_001241922.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=SO06_RS03695;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241922.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 33125 33442 . + . ID=gene-SO06_RS03700;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=SO06_RS03700 NZ_MYDG01000002.1 Protein Homology CDS 33125 33442 . + 0 ID=cds-WP_001161670.1;Parent=gene-SO06_RS03700;Dbxref=GenBank:WP_001161670.1;Name=WP_001161670.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=SO06_RS03700;product=ribosome silencing factor;protein_id=WP_001161670.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 33446 33913 . + . ID=gene-SO06_RS03705;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=SO06_RS03705 NZ_MYDG01000002.1 Protein Homology CDS 33446 33913 . + 0 ID=cds-WP_000776107.1;Parent=gene-SO06_RS03705;Dbxref=GenBank:WP_000776107.1;Name=WP_000776107.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=SO06_RS03705;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776107.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 33944 35845 . + . ID=gene-SO06_RS03710;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=SO06_RS03710 NZ_MYDG01000002.1 Protein Homology CDS 33944 35845 . + 0 ID=cds-WP_000828700.1;Parent=gene-SO06_RS03710;Dbxref=GenBank:WP_000828700.1;Name=WP_000828700.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=SO06_RS03710;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828700.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 35848 36960 . + . ID=gene-SO06_RS03715;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=SO06_RS03715 NZ_MYDG01000002.1 Protein Homology CDS 35848 36960 . + 0 ID=cds-WP_000131713.1;Parent=gene-SO06_RS03715;Dbxref=GenBank:WP_000131713.1;Name=WP_000131713.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=SO06_RS03715;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131713.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 36971 38104 . + . ID=gene-SO06_RS03720;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=SO06_RS03720 NZ_MYDG01000002.1 Protein Homology CDS 36971 38104 . + 0 ID=cds-WP_023231449.1;Parent=gene-SO06_RS03720;Dbxref=GenBank:WP_023231449.1;Name=WP_023231449.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=SO06_RS03720;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_023231449.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 38244 39455 . + . ID=gene-SO06_RS03725;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=SO06_RS03725 NZ_MYDG01000002.1 Protein Homology CDS 38244 39455 . + 0 ID=cds-WP_000858711.1;Parent=gene-SO06_RS03725;Dbxref=GenBank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=SO06_RS03725;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 39563 39826 . + . ID=gene-SO06_RS03730;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=SO06_RS03730 NZ_MYDG01000002.1 Protein Homology CDS 39563 39826 . + 0 ID=cds-WP_000850547.1;Parent=gene-SO06_RS03730;Dbxref=GenBank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=SO06_RS03730;product=DUF493 family protein YbeD;protein_id=WP_000850547.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 39926 40567 . + . ID=gene-SO06_RS03735;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=SO06_RS03735 NZ_MYDG01000002.1 Protein Homology CDS 39926 40567 . + 0 ID=cds-WP_000284009.1;Parent=gene-SO06_RS03735;Dbxref=GenBank:WP_000284009.1;Name=WP_000284009.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=SO06_RS03735;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284009.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 40869 41822 . + . ID=gene-SO06_RS03740;Name=SO06_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03740 NZ_MYDG01000002.1 Protein Homology CDS 40869 41822 . + 0 ID=cds-WP_001282817.1;Parent=gene-SO06_RS03740;Dbxref=GenBank:WP_001282817.1;Name=WP_001282817.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=SO06_RS03740;product=YbeF family transcriptional regulator;protein_id=WP_001282817.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 42028 42993 . + . ID=gene-SO06_RS03745;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=SO06_RS03745 NZ_MYDG01000002.1 Protein Homology CDS 42028 42993 . + 0 ID=cds-WP_000042640.1;Parent=gene-SO06_RS03745;Dbxref=GenBank:WP_000042640.1;Name=WP_000042640.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=SO06_RS03745;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 43079 43282 . - . ID=gene-SO06_RS03750;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=SO06_RS03750 NZ_MYDG01000002.1 Protein Homology CDS 43079 43282 . - 0 ID=cds-WP_000503938.1;Parent=gene-SO06_RS03750;Dbxref=GenBank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=SO06_RS03750;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 43411 44199 . - . ID=gene-SO06_RS03755;Name=SO06_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03755 NZ_MYDG01000002.1 Protein Homology CDS 43411 44199 . - 0 ID=cds-WP_000495787.1;Parent=gene-SO06_RS03755;Dbxref=GenBank:WP_000495787.1;Name=WP_000495787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=SO06_RS03755;product=deaminated glutathione amidase;protein_id=WP_000495787.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 44290 44673 . + . ID=gene-SO06_RS03760;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=SO06_RS03760 NZ_MYDG01000002.1 Protein Homology CDS 44290 44673 . + 0 ID=cds-WP_000939753.1;Parent=gene-SO06_RS03760;Dbxref=GenBank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=SO06_RS03760;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 44731 44940 . - . ID=gene-SO06_RS03765;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=SO06_RS03765 NZ_MYDG01000002.1 Protein Homology CDS 44731 44940 . - 0 ID=cds-WP_000034826.1;Parent=gene-SO06_RS03765;Dbxref=GenBank:WP_000034826.1;Name=WP_000034826.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=SO06_RS03765;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 45128 45700 . - . ID=gene-SO06_RS03770;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=SO06_RS03770 NZ_MYDG01000002.1 Protein Homology CDS 45128 45700 . - 0 ID=cds-WP_001623090.1;Parent=gene-SO06_RS03770;Dbxref=GenBank:WP_001623090.1;Name=WP_001623090.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=SO06_RS03770;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001623090.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 46079 47464 . + . ID=gene-SO06_RS03775;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=SO06_RS03775 NZ_MYDG01000002.1 Protein Homology CDS 46079 47464 . + 0 ID=cds-WP_000958619.1;Parent=gene-SO06_RS03775;Dbxref=GenBank:WP_000958619.1;Name=WP_000958619.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=SO06_RS03775;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000958619.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 47518 48198 . - . ID=gene-SO06_RS03780;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=SO06_RS03780 NZ_MYDG01000002.1 Protein Homology CDS 47518 48198 . - 0 ID=cds-WP_000138786.1;Parent=gene-SO06_RS03780;Dbxref=GenBank:WP_000138786.1;Name=WP_000138786.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=SO06_RS03780;product=two-component response regulator DpiA;protein_id=WP_000138786.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 48167 49828 . - . ID=gene-SO06_RS03785;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=SO06_RS03785 NZ_MYDG01000002.1 Protein Homology CDS 48167 49828 . - 0 ID=cds-WP_023206859.1;Parent=gene-SO06_RS03785;Dbxref=GenBank:WP_023206859.1;Name=WP_023206859.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=SO06_RS03785;product=sensor histidine kinase DpiB;protein_id=WP_023206859.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 50213 51289 . + . ID=gene-SO06_RS03790;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=SO06_RS03790 NZ_MYDG01000002.1 Protein Homology CDS 50213 51289 . + 0 ID=cds-WP_000467872.1;Parent=gene-SO06_RS03790;Dbxref=GenBank:WP_000467872.1;Name=WP_000467872.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=SO06_RS03790;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467872.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 51286 51582 . + . ID=gene-SO06_RS03795;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=SO06_RS03795 NZ_MYDG01000002.1 Protein Homology CDS 51286 51582 . + 0 ID=cds-WP_000700679.1;Parent=gene-SO06_RS03795;Dbxref=GenBank:WP_000700679.1;Name=WP_000700679.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=SO06_RS03795;product=citrate lyase acyl carrier protein;protein_id=WP_000700679.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 51579 52487 . + . ID=gene-SO06_RS03800;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=SO06_RS03800 NZ_MYDG01000002.1 Protein Homology CDS 51579 52487 . + 0 ID=cds-WP_000622342.1;Parent=gene-SO06_RS03800;Dbxref=GenBank:WP_000622342.1;Name=WP_000622342.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=SO06_RS03800;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622342.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 52497 54026 . + . ID=gene-SO06_RS03805;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=SO06_RS03805 NZ_MYDG01000002.1 Protein Homology CDS 52497 54026 . + 0 ID=cds-WP_000192334.1;Parent=gene-SO06_RS03805;Dbxref=GenBank:WP_000192334.1;Name=WP_000192334.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=SO06_RS03805;product=citrate lyase subunit alpha;protein_id=WP_000192334.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 54030 54581 . + . ID=gene-SO06_RS03810;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=SO06_RS03810 NZ_MYDG01000002.1 Protein Homology CDS 54030 54581 . + 0 ID=cds-WP_023231644.1;Parent=gene-SO06_RS03810;Dbxref=GenBank:WP_023231644.1;Name=WP_023231644.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=SO06_RS03810;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_023231644.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 54553 55449 . + . ID=gene-SO06_RS03815;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=SO06_RS03815 NZ_MYDG01000002.1 Protein Homology CDS 54553 55449 . + 0 ID=cds-WP_000982670.1;Parent=gene-SO06_RS03815;Dbxref=GenBank:WP_000982670.1;Name=WP_000982670.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=SO06_RS03815;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982670.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 55487 56950 . + . ID=gene-SO06_RS03820;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=SO06_RS03820 NZ_MYDG01000002.1 Protein Homology CDS 55487 56950 . + 0 ID=cds-WP_000059029.1;Parent=gene-SO06_RS03820;Dbxref=GenBank:WP_000059029.1;Name=WP_000059029.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=SO06_RS03820;product=citrate/succinate antiporter CitT;protein_id=WP_000059029.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 57060 57866 . + . ID=gene-SO06_RS03825;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=SO06_RS03825 NZ_MYDG01000002.1 Protein Homology CDS 57060 57866 . + 0 ID=cds-WP_001092585.1;Parent=gene-SO06_RS03825;Dbxref=GenBank:WP_001092585.1;Name=WP_001092585.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=SO06_RS03825;product=ribonuclease I;protein_id=WP_001092585.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 58101 58511 . + . ID=gene-SO06_RS03835;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=SO06_RS03835 NZ_MYDG01000002.1 Protein Homology CDS 58101 58511 . + 0 ID=cds-WP_000089748.1;Parent=gene-SO06_RS03835;Dbxref=GenBank:WP_000089748.1;Name=WP_000089748.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=SO06_RS03835;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 58594 59832 . - . ID=gene-SO06_RS03840;Name=SO06_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03840 NZ_MYDG01000002.1 Protein Homology CDS 58594 59832 . - 0 ID=cds-WP_001749275.1;Parent=gene-SO06_RS03840;Dbxref=GenBank:WP_001749275.1;Name=WP_001749275.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=SO06_RS03840;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_001749275.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 60055 60483 . + . ID=gene-SO06_RS03850;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=SO06_RS03850 NZ_MYDG01000002.1 Protein Homology CDS 60055 60483 . + 0 ID=cds-WP_000278499.1;Parent=gene-SO06_RS03850;Dbxref=GenBank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=SO06_RS03850;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 60551 61318 . - . ID=gene-SO06_RS03855;Name=SO06_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03855 NZ_MYDG01000002.1 Protein Homology CDS 60551 61318 . - 0 ID=cds-WP_000417102.1;Parent=gene-SO06_RS03855;Dbxref=GenBank:WP_000417102.1;Name=WP_000417102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=SO06_RS03855;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000417102.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 61318 61875 . - . ID=gene-SO06_RS03860;Name=SO06_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03860 NZ_MYDG01000002.1 Protein Homology CDS 61318 61875 . - 0 ID=cds-WP_001250381.1;Parent=gene-SO06_RS03860;Dbxref=GenBank:WP_001250381.1;Name=WP_001250381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=SO06_RS03860;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001250381.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 61872 64151 . - . ID=gene-SO06_RS03865;Name=SO06_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03865 NZ_MYDG01000002.1 Protein Homology CDS 61872 64151 . - 0 ID=cds-WP_048348767.1;Parent=gene-SO06_RS03865;Dbxref=GenBank:WP_048348767.1;Name=WP_048348767.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=SO06_RS03865;product=molybdopterin-dependent oxidoreductase;protein_id=WP_048348767.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 64144 64704 . - . ID=gene-SO06_RS03870;Name=SO06_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03870 NZ_MYDG01000002.1 Protein Homology CDS 64144 64704 . - 0 ID=cds-WP_000377434.1;Parent=gene-SO06_RS03870;Dbxref=GenBank:WP_000377434.1;Name=WP_000377434.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=SO06_RS03870;product=TorD/DmsD family molecular chaperone;protein_id=WP_000377434.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 65037 66602 . - . ID=gene-SO06_RS03875;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=SO06_RS03875 NZ_MYDG01000002.1 Protein Homology CDS 65037 66602 . - 0 ID=cds-WP_000887644.1;Parent=gene-SO06_RS03875;Dbxref=GenBank:WP_000887644.1;Name=WP_000887644.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=SO06_RS03875;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887644.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 66844 67407 . - . ID=gene-SO06_RS03880;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=SO06_RS03880 NZ_MYDG01000002.1 Protein Homology CDS 66844 67407 . - 0 ID=cds-WP_000052802.1;Parent=gene-SO06_RS03880;Dbxref=GenBank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=SO06_RS03880;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 67848 68594 . + . ID=gene-SO06_RS03885;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=SO06_RS03885 NZ_MYDG01000002.1 Protein Homology CDS 67848 68594 . + 0 ID=cds-WP_000597122.1;Parent=gene-SO06_RS03885;Dbxref=GenBank:WP_000597122.1;Name=WP_000597122.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=SO06_RS03885;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000597122.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 68911 69813 . + . ID=gene-SO06_RS03895;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=SO06_RS03895 NZ_MYDG01000002.1 Protein Homology CDS 68911 69813 . + 0 ID=cds-WP_000002501.1;Parent=gene-SO06_RS03895;Dbxref=GenBank:WP_000002501.1;Name=WP_000002501.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=SO06_RS03895;product=DNA-binding transcriptional repressor CitR;protein_id=WP_000002501.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 69979 71214 . + . ID=gene-SO06_RS03900;Name=SO06_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03900 NZ_MYDG01000002.1 Protein Homology CDS 69979 71214 . + 0 ID=cds-WP_000118142.1;Parent=gene-SO06_RS03900;Dbxref=GenBank:WP_000118142.1;Name=WP_000118142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=SO06_RS03900;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000118142.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 71187 71804 . + . ID=gene-SO06_RS03905;Name=SO06_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03905 NZ_MYDG01000002.1 Protein Homology CDS 71187 71804 . + 0 ID=cds-WP_001164751.1;Parent=gene-SO06_RS03905;Dbxref=GenBank:WP_001164751.1;Name=WP_001164751.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=SO06_RS03905;product=IbrB-like domain-containing protein;protein_id=WP_001164751.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 71805 72965 . - . ID=gene-SO06_RS03910;Name=SO06_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03910 NZ_MYDG01000002.1 Protein Homology CDS 71805 72965 . - 0 ID=cds-WP_001245599.1;Parent=gene-SO06_RS03910;Dbxref=GenBank:WP_001245599.1;Name=WP_001245599.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=SO06_RS03910;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_001245599.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 73092 74180 . + . ID=gene-SO06_RS03915;Name=SO06_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03915 NZ_MYDG01000002.1 Protein Homology CDS 73092 74180 . + 0 ID=cds-WP_023231635.1;Parent=gene-SO06_RS03915;Dbxref=GenBank:WP_023231635.1;Name=WP_023231635.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=SO06_RS03915;product=oxidoreductase;protein_id=WP_023231635.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 74216 74413 . - . ID=gene-SO06_RS03920;Name=SO06_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03920 NZ_MYDG01000002.1 Protein Homology CDS 74216 74413 . - 0 ID=cds-WP_000460619.1;Parent=gene-SO06_RS03920;Dbxref=GenBank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=SO06_RS03920;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 74477 76582 . - . ID=gene-SO06_RS03925;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=SO06_RS03925 NZ_MYDG01000002.1 Protein Homology CDS 74477 76582 . - 0 ID=cds-WP_001043108.1;Parent=gene-SO06_RS03925;Dbxref=GenBank:WP_001043108.1;Name=WP_001043108.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=SO06_RS03925;product=pyruvate/proton symporter CstA;protein_id=WP_001043108.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 76764 77177 . - . ID=gene-SO06_RS03930;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=SO06_RS03930 NZ_MYDG01000002.1 Protein Homology CDS 76764 77177 . - 0 ID=cds-WP_020898524.1;Parent=gene-SO06_RS03930;Dbxref=GenBank:WP_020898524.1;Name=WP_020898524.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=SO06_RS03930;product=proofreading thioesterase EntH;protein_id=WP_020898524.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 77180 77935 . - . ID=gene-SO06_RS03935;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=SO06_RS03935 NZ_MYDG01000002.1 Protein Homology CDS 77180 77935 . - 0 ID=cds-WP_023231634.1;Parent=gene-SO06_RS03935;Dbxref=GenBank:WP_023231634.1;Name=WP_023231634.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=SO06_RS03935;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_023231634.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 77935 78792 . - . ID=gene-SO06_RS03940;Name=SO06_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03940 NZ_MYDG01000002.1 Protein Homology CDS 77935 78792 . - 0 ID=cds-WP_001007166.1;Parent=gene-SO06_RS03940;Dbxref=GenBank:WP_001007166.1;Name=WP_001007166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=SO06_RS03940;product=isochorismatase;protein_id=WP_001007166.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 78806 80416 . - . ID=gene-SO06_RS03945;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=SO06_RS03945 NZ_MYDG01000002.1 Protein Homology CDS 78806 80416 . - 0 ID=cds-WP_023231633.1;Parent=gene-SO06_RS03945;Dbxref=GenBank:WP_023231633.1;Name=WP_023231633.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=SO06_RS03945;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_023231633.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 80426 81601 . - . ID=gene-SO06_RS03950;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=SO06_RS03950 NZ_MYDG01000002.1 Protein Homology CDS 80426 81601 . - 0 ID=cds-WP_023231632.1;Parent=gene-SO06_RS03950;Dbxref=GenBank:WP_023231632.1;Name=WP_023231632.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=SO06_RS03950;product=isochorismate synthase EntC;protein_id=WP_023231632.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 81909 82865 . + . ID=gene-SO06_RS03955;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=SO06_RS03955 NZ_MYDG01000002.1 Protein Homology CDS 81909 82865 . + 0 ID=cds-WP_001238988.1;Parent=gene-SO06_RS03955;Dbxref=GenBank:WP_001238988.1;Name=WP_001238988.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=SO06_RS03955;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001238988.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 82928 84172 . - . ID=gene-SO06_RS03960;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=SO06_RS03960 NZ_MYDG01000002.1 Protein Homology CDS 82928 84172 . - 0 ID=cds-WP_001081666.1;Parent=gene-SO06_RS03960;Dbxref=GenBank:WP_001081666.1;Name=WP_001081666.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=SO06_RS03960;product=enterobactin transporter EntS;protein_id=WP_001081666.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 84283 85290 . + . ID=gene-SO06_RS03965;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=SO06_RS03965 NZ_MYDG01000002.1 Protein Homology CDS 84283 85290 . + 0 ID=cds-WP_001277879.1;Parent=gene-SO06_RS03965;Dbxref=GenBank:WP_001277879.1;Name=WP_001277879.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=SO06_RS03965;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277879.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 85290 86279 . + . ID=gene-SO06_RS03970;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=SO06_RS03970 NZ_MYDG01000002.1 Protein Homology CDS 85290 86279 . + 0 ID=cds-WP_000480053.1;Parent=gene-SO06_RS03970;Dbxref=GenBank:WP_000480053.1;Name=WP_000480053.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=SO06_RS03970;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480053.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 86276 87070 . + . ID=gene-SO06_RS03975;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=SO06_RS03975 NZ_MYDG01000002.1 Protein Homology CDS 86276 87070 . + 0 ID=cds-WP_023231631.1;Parent=gene-SO06_RS03975;Dbxref=GenBank:WP_023231631.1;Name=WP_023231631.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=SO06_RS03975;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_023231631.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 87123 88259 . - . ID=gene-SO06_RS03980;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=SO06_RS03980 NZ_MYDG01000002.1 Protein Homology CDS 87123 88259 . - 0 ID=cds-WP_023231630.1;Parent=gene-SO06_RS03980;Dbxref=GenBank:WP_023231630.1;Name=WP_023231630.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=SO06_RS03980;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_023231630.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 88509 92393 . - . ID=gene-SO06_RS03985;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=SO06_RS03985 NZ_MYDG01000002.1 Protein Homology CDS 88509 92393 . - 0 ID=cds-WP_023231629.1;Parent=gene-SO06_RS03985;Dbxref=GenBank:WP_023231629.1;Name=WP_023231629.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=SO06_RS03985;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_023231629.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 92390 92608 . - . ID=gene-SO06_RS03990;Name=SO06_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS03990 NZ_MYDG01000002.1 Protein Homology CDS 92390 92608 . - 0 ID=cds-WP_000396008.1;Parent=gene-SO06_RS03990;Dbxref=GenBank:WP_000396008.1;Name=WP_000396008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=SO06_RS03990;product=MbtH family protein;protein_id=WP_000396008.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 92639 93853 . - . ID=gene-SO06_RS03995;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=SO06_RS03995 NZ_MYDG01000002.1 Protein Homology CDS 92639 93853 . - 0 ID=cds-WP_024797995.1;Parent=gene-SO06_RS03995;Dbxref=GenBank:WP_024797995.1;Name=WP_024797995.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=SO06_RS03995;product=enterochelin esterase;protein_id=WP_024797995.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 94042 96297 . + . ID=gene-SO06_RS04000;Name=SO06_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04000 NZ_MYDG01000002.1 Protein Homology CDS 94042 96297 . + 0 ID=cds-WP_017466026.1;Parent=gene-SO06_RS04000;Dbxref=GenBank:WP_017466026.1;Name=WP_017466026.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=SO06_RS04000;product=TonB-dependent siderophore receptor;protein_id=WP_017466026.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 96343 97047 . + . ID=gene-SO06_RS04005;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=SO06_RS04005 NZ_MYDG01000002.1 Protein Homology CDS 96343 97047 . + 0 ID=cds-WP_023231626.1;Parent=gene-SO06_RS04005;Dbxref=GenBank:WP_023231626.1;Name=WP_023231626.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=SO06_RS04005;product=enterobactin synthase subunit EntD;protein_id=WP_023231626.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 97059 98177 . + . ID=gene-SO06_RS04010;Name=SO06_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04010 NZ_MYDG01000002.1 Protein Homology CDS 97059 98177 . + 0 ID=cds-WP_001196918.1;Parent=gene-SO06_RS04010;Dbxref=GenBank:WP_001196918.1;Name=WP_001196918.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=SO06_RS04010;product=YbdK family carboxylate-amine ligase;protein_id=WP_001196918.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 98244 98492 . + . ID=gene-SO06_RS04015;Name=SO06_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04015 NZ_MYDG01000002.1 Protein Homology CDS 98244 98492 . + 0 ID=cds-WP_000682497.1;Parent=gene-SO06_RS04015;Dbxref=GenBank:WP_000682497.1;Name=WP_000682497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=SO06_RS04015;product=DUF1158 family protein;protein_id=WP_000682497.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 98498 98839 . - . ID=gene-SO06_RS04020;Name=SO06_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04020 NZ_MYDG01000002.1 Protein Homology CDS 98498 98839 . - 0 ID=cds-WP_000155631.1;Parent=gene-SO06_RS04020;Dbxref=GenBank:WP_000155631.1;Name=WP_000155631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=SO06_RS04020;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155631.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 99128 99709 . + . ID=gene-SO06_RS04025;Name=SO06_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04025 NZ_MYDG01000002.1 Protein Homology CDS 99128 99709 . + 0 ID=cds-WP_000113609.1;Parent=gene-SO06_RS04025;Dbxref=GenBank:WP_000113609.1;Name=WP_000113609.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=SO06_RS04025;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113609.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 99709 100077 . + . ID=gene-SO06_RS04030;Name=SO06_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04030 NZ_MYDG01000002.1 Protein Homology CDS 99709 100077 . + 0 ID=cds-WP_023231625.1;Parent=gene-SO06_RS04030;Dbxref=GenBank:WP_023231625.1;Name=WP_023231625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=SO06_RS04030;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_023231625.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 100174 100827 . + . ID=gene-SO06_RS04035;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=SO06_RS04035 NZ_MYDG01000002.1 Protein Homology CDS 100174 100827 . + 0 ID=cds-WP_000355879.1;Parent=gene-SO06_RS04035;Dbxref=GenBank:WP_000355879.1;Name=WP_000355879.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=SO06_RS04035;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000355879.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 101027 101476 . + . ID=gene-SO06_RS04040;Name=SO06_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04040 NZ_MYDG01000002.1 Protein Homology CDS 101027 101476 . + 0 ID=cds-WP_001216659.1;Parent=gene-SO06_RS04040;Dbxref=GenBank:WP_001216659.1;Name=WP_001216659.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459569.1;locus_tag=SO06_RS04040;product=PTS sugar transporter subunit IIA;protein_id=WP_001216659.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 101454 101924 . + . ID=gene-SO06_RS04045;Name=SO06_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04045 NZ_MYDG01000002.1 Protein Homology CDS 101454 101924 . + 0 ID=cds-WP_000594177.1;Parent=gene-SO06_RS04045;Dbxref=GenBank:WP_000594177.1;Name=WP_000594177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459568.1;locus_tag=SO06_RS04045;product=PTS sugar transporter subunit IIB;protein_id=WP_000594177.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 101939 102682 . + . ID=gene-SO06_RS04050;Name=SO06_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04050 NZ_MYDG01000002.1 Protein Homology CDS 101939 102682 . + 0 ID=cds-WP_000927522.1;Parent=gene-SO06_RS04050;Dbxref=GenBank:WP_000927522.1;Name=WP_000927522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459567.1;locus_tag=SO06_RS04050;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000927522.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 102685 103539 . + . ID=gene-SO06_RS04055;Name=SO06_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04055 NZ_MYDG01000002.1 Protein Homology CDS 102685 103539 . + 0 ID=cds-WP_000005802.1;Parent=gene-SO06_RS04055;Dbxref=GenBank:WP_000005802.1;Name=WP_000005802.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459566.1;locus_tag=SO06_RS04055;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000005802.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 103572 104615 . + . ID=gene-SO06_RS04060;Name=SO06_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04060 NZ_MYDG01000002.1 Protein Homology CDS 103572 104615 . + 0 ID=cds-WP_023139453.1;Parent=gene-SO06_RS04060;Dbxref=GenBank:WP_023139453.1;Name=WP_023139453.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459565.1;locus_tag=SO06_RS04060;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=WP_023139453.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 104682 105668 . + . ID=gene-SO06_RS04065;Name=SO06_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04065 NZ_MYDG01000002.1 Protein Homology CDS 104682 105668 . + 0 ID=cds-WP_023206877.1;Parent=gene-SO06_RS04065;Dbxref=GenBank:WP_023206877.1;Name=WP_023206877.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459564.1;locus_tag=SO06_RS04065;product=SIS domain-containing protein;protein_id=WP_023206877.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 105796 108525 . - . ID=gene-SO06_RS04070;Name=SO06_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04070 NZ_MYDG01000002.1 Protein Homology CDS 105796 108525 . - 0 ID=cds-WP_023231622.1;Parent=gene-SO06_RS04070;Dbxref=GenBank:WP_023231622.1;Name=WP_023231622.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459563.1;locus_tag=SO06_RS04070;product=sigma 54-interacting transcriptional regulator;protein_id=WP_023231622.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 108692 110662 . - . ID=gene-SO06_RS04075;Name=SO06_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04075 NZ_MYDG01000002.1 Protein Homology CDS 108692 110662 . - 0 ID=cds-WP_023231621.1;Parent=gene-SO06_RS04075;Dbxref=GenBank:WP_023231621.1;Name=WP_023231621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=SO06_RS04075;product=autotransporter domain-containing esterase;protein_id=WP_023231621.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 110973 112220 . + . ID=gene-SO06_RS04085;Name=SO06_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04085 NZ_MYDG01000002.1 Protein Homology CDS 110973 112220 . + 0 ID=cds-WP_023231620.1;Parent=gene-SO06_RS04085;Dbxref=GenBank:WP_023231620.1;Name=WP_023231620.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=SO06_RS04085;product=mechanosensitive ion channel family protein;protein_id=WP_023231620.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 112262 113656 . - . ID=gene-SO06_RS04090;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=SO06_RS04090 NZ_MYDG01000002.1 Protein Homology CDS 112262 113656 . - 0 ID=cds-WP_000786283.1;Parent=gene-SO06_RS04090;Dbxref=GenBank:WP_000786283.1;Name=WP_000786283.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=SO06_RS04090;product=phenylalanine transporter;protein_id=WP_000786283.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 113982 115157 . + . ID=gene-SO06_RS04095;Name=SO06_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04095 NZ_MYDG01000002.1 Protein Homology CDS 113982 115157 . + 0 ID=cds-WP_001033450.1;Parent=gene-SO06_RS04095;Dbxref=GenBank:WP_001033450.1;Name=WP_001033450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=SO06_RS04095;product=DnaJ family molecular chaperone;protein_id=WP_001033450.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 115244 115804 . - . ID=gene-SO06_RS04100;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=SO06_RS04100 NZ_MYDG01000002.1 Protein Homology CDS 115244 115804 . - 0 ID=cds-WP_000362177.1;Parent=gene-SO06_RS04100;Dbxref=GenBank:WP_000362177.1;Name=WP_000362177.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=SO06_RS04100;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362177.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 115817 116053 . - . ID=gene-SO06_RS04105;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=SO06_RS04105 NZ_MYDG01000002.1 Protein Homology CDS 115817 116053 . - 0 ID=cds-WP_000913122.1;Parent=gene-SO06_RS04105;Dbxref=GenBank:WP_000913122.1;Name=WP_000913122.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=SO06_RS04105;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000913122.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 116210 117535 . - . ID=gene-SO06_RS04110;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=SO06_RS04110 NZ_MYDG01000002.1 Protein Homology CDS 116210 117535 . - 0 ID=cds-WP_023137892.1;Parent=gene-SO06_RS04110;Dbxref=GenBank:WP_023137892.1;Name=WP_023137892.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=SO06_RS04110;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_023137892.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 117751 118605 . + . ID=gene-SO06_RS04115;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=SO06_RS04115 NZ_MYDG01000002.1 Protein Homology CDS 117751 118605 . + 0 ID=cds-WP_023231618.1;Parent=gene-SO06_RS04115;Dbxref=GenBank:WP_023231618.1;Name=WP_023231618.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=SO06_RS04115;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_023231618.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 118656 118913 . - . ID=gene-SO06_RS04120;Name=SO06_RS04120;end_range=118913,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS04120;partial=true;pseudo=true NZ_MYDG01000002.1 Protein Homology CDS 118656 118913 . - 0 ID=cds-SO06_RS04120;Parent=gene-SO06_RS04120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=118913,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=SO06_RS04120;partial=true;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 118917 119289 . + . ID=gene-SO06_RS04125;Name=SO06_RS04125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS04125;partial=true;pseudo=true;start_range=.,118917 NZ_MYDG01000002.1 Protein Homology CDS 118917 119289 . + 0 ID=cds-SO06_RS04125;Parent=gene-SO06_RS04125;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=SO06_RS04125;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,118917;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 119489 119734 . + . ID=gene-SO06_RS04130;Name=SO06_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04130 NZ_MYDG01000002.1 Protein Homology CDS 119489 119734 . + 0 ID=cds-WP_000445904.1;Parent=gene-SO06_RS04130;Dbxref=GenBank:WP_000445904.1;Name=WP_000445904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230236.1;locus_tag=SO06_RS04130;product=hypothetical protein;protein_id=WP_000445904.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 120157 120519 . + . ID=gene-SO06_RS04135;Name=SO06_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04135 NZ_MYDG01000002.1 Protein Homology CDS 120157 120519 . + 0 ID=cds-WP_000915520.1;Parent=gene-SO06_RS04135;Dbxref=GenBank:WP_000915520.1;Name=WP_000915520.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=SO06_RS04135;product=GtrA family protein;protein_id=WP_000915520.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 120516 121442 . + . ID=gene-SO06_RS04140;Name=SO06_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04140 NZ_MYDG01000002.1 Protein Homology CDS 120516 121442 . + 0 ID=cds-WP_000703645.1;Parent=gene-SO06_RS04140;Dbxref=GenBank:WP_000703645.1;Name=WP_000703645.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=SO06_RS04140;product=glycosyltransferase family 2 protein;protein_id=WP_000703645.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 121423 123075 . + . ID=gene-SO06_RS04145;Name=gtrC1;gbkey=Gene;gene=gtrC1;gene_biotype=protein_coding;locus_tag=SO06_RS04145 NZ_MYDG01000002.1 Protein Homology CDS 121423 123075 . + 0 ID=cds-WP_010988978.1;Parent=gene-SO06_RS04145;Dbxref=GenBank:WP_010988978.1;Name=WP_010988978.1;gbkey=CDS;gene=gtrC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459550.1;locus_tag=SO06_RS04145;product=putative glucosyltransferase GtrC1;protein_id=WP_010988978.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 123462 123680 . + . ID=gene-SO06_RS25435;Name=SO06_RS25435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25435 NZ_MYDG01000002.1 Protein Homology CDS 123462 123680 . + 0 ID=cds-WP_001541675.1;Parent=gene-SO06_RS25435;Dbxref=GenBank:WP_001541675.1;Name=WP_001541675.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=SO06_RS25435;product=IS3 family transposase;protein_id=WP_001541675.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 123715 124129 . + . ID=gene-SO06_RS25440;Name=SO06_RS25440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25440;partial=true;pseudo=true;start_range=.,123715 NZ_MYDG01000002.1 Protein Homology CDS 123715 124129 . + 0 ID=cds-SO06_RS25440;Parent=gene-SO06_RS25440;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612006.1;locus_tag=SO06_RS25440;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,123715;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 124098 124223 . + . ID=gene-SO06_RS04155;Name=SO06_RS04155;end_range=124223,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS04155;partial=true;pseudo=true;start_range=.,124098 NZ_MYDG01000002.1 Protein Homology CDS 124098 124223 . + 0 ID=cds-SO06_RS04155;Parent=gene-SO06_RS04155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=124223,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=SO06_RS04155;partial=true;product=integrase;pseudo=true;start_range=.,124098;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 124245 124321 . - . ID=gene-SO06_RS04160;Name=SO06_RS04160;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS04160 NZ_MYDG01000002.1 tRNAscan-SE tRNA 124245 124321 . - . ID=rna-SO06_RS04160;Parent=gene-SO06_RS04160;anticodon=(pos:complement(124285..124287));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS04160;product=tRNA-Arg NZ_MYDG01000002.1 tRNAscan-SE exon 124245 124321 . - . ID=exon-SO06_RS04160-1;Parent=rna-SO06_RS04160;anticodon=(pos:complement(124285..124287));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS04160;product=tRNA-Arg NZ_MYDG01000002.1 RefSeq gene 124576 125172 . + . ID=gene-SO06_RS04170;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=SO06_RS04170 NZ_MYDG01000002.1 Protein Homology CDS 124576 125172 . + 0 ID=cds-WP_001523348.1;Parent=gene-SO06_RS04170;Dbxref=GenBank:WP_001523348.1;Name=WP_001523348.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=SO06_RS04170;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_001523348.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 125334 125645 . + . ID=gene-SO06_RS04175;Name=SO06_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04175 NZ_MYDG01000002.1 Protein Homology CDS 125334 125645 . + 0 ID=cds-WP_000226492.1;Parent=gene-SO06_RS04175;Dbxref=GenBank:WP_000226492.1;Name=WP_000226492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=SO06_RS04175;product=hypothetical protein;protein_id=WP_000226492.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 125664 126386 . + . ID=gene-SO06_RS04180;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=SO06_RS04180 NZ_MYDG01000002.1 Protein Homology CDS 125664 126386 . + 0 ID=cds-WP_023231615.1;Parent=gene-SO06_RS04180;Dbxref=GenBank:WP_023231615.1;Name=WP_023231615.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=SO06_RS04180;product=fimbria biosynthesis regulator FimY;protein_id=WP_023231615.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 126990 127622 . + . ID=gene-SO06_RS04185;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=SO06_RS04185 NZ_MYDG01000002.1 Protein Homology CDS 126990 127622 . + 0 ID=cds-WP_000801273.1;Parent=gene-SO06_RS04185;Dbxref=GenBank:WP_000801273.1;Name=WP_000801273.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=SO06_RS04185;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801273.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 127668 128186 . - . ID=gene-SO06_RS04190;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=SO06_RS04190 NZ_MYDG01000002.1 Protein Homology CDS 127668 128186 . - 0 ID=cds-WP_000577507.1;Parent=gene-SO06_RS04190;Dbxref=GenBank:WP_000577507.1;Name=WP_000577507.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=SO06_RS04190;product=fimbria assembly protein;protein_id=WP_000577507.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 128196 129203 . - . ID=gene-SO06_RS04195;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=SO06_RS04195 NZ_MYDG01000002.1 Protein Homology CDS 128196 129203 . - 0 ID=cds-WP_023231614.1;Parent=gene-SO06_RS04195;Dbxref=GenBank:WP_023231614.1;Name=WP_023231614.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=SO06_RS04195;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_023231614.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 129218 131830 . - . ID=gene-SO06_RS04200;Name=SO06_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04200 NZ_MYDG01000002.1 Protein Homology CDS 129218 131830 . - 0 ID=cds-WP_023231613.1;Parent=gene-SO06_RS04200;Dbxref=GenBank:WP_023231613.1;Name=WP_023231613.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=SO06_RS04200;product=fimbrial biogenesis usher protein;protein_id=WP_023231613.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 131861 132553 . - . ID=gene-SO06_RS04205;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=SO06_RS04205 NZ_MYDG01000002.1 Protein Homology CDS 131861 132553 . - 0 ID=cds-WP_001519112.1;Parent=gene-SO06_RS04205;Dbxref=GenBank:WP_001519112.1;Name=WP_001519112.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=SO06_RS04205;product=type 1 fimbria chaperone FimC;protein_id=WP_001519112.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 132597 133130 . - . ID=gene-SO06_RS04210;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=SO06_RS04210 NZ_MYDG01000002.1 Protein Homology CDS 132597 133130 . - 0 ID=cds-WP_000619614.1;Parent=gene-SO06_RS04210;Dbxref=GenBank:WP_000619614.1;Name=WP_000619614.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=SO06_RS04210;product=type 1 fimbrial protein subunit FimI;protein_id=WP_000619614.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 133205 133762 . - . ID=gene-SO06_RS04215;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=SO06_RS04215 NZ_MYDG01000002.1 Protein Homology CDS 133205 133762 . - 0 ID=cds-WP_000681025.1;Parent=gene-SO06_RS04215;Dbxref=GenBank:WP_000681025.1;Name=WP_000681025.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=SO06_RS04215;product=type 1 fimbrial protein subunit FimA;protein_id=WP_000681025.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 134309 135175 . + . ID=gene-SO06_RS04225;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=SO06_RS04225 NZ_MYDG01000002.1 Protein Homology CDS 134309 135175 . + 0 ID=cds-WP_000729165.1;Parent=gene-SO06_RS04225;Dbxref=GenBank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=SO06_RS04225;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 135177 135389 . + . ID=gene-SO06_RS04230;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=SO06_RS04230 NZ_MYDG01000002.1 Protein Homology CDS 135177 135389 . + 0 ID=cds-WP_000190281.1;Parent=gene-SO06_RS04230;Dbxref=GenBank:WP_000190281.1;Name=WP_000190281.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=SO06_RS04230;product=ribosome-associated protein YbcJ;protein_id=WP_000190281.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 135516 136061 . + . ID=gene-SO06_RS04235;Name=SO06_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04235 NZ_MYDG01000002.1 Protein Homology CDS 135516 136061 . + 0 ID=cds-WP_001143571.1;Parent=gene-SO06_RS04235;Dbxref=GenBank:WP_001143571.1;Name=WP_001143571.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=SO06_RS04235;product=metal-dependent hydrolase;protein_id=WP_001143571.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 136054 136491 . + . ID=gene-SO06_RS04240;Name=SO06_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04240 NZ_MYDG01000002.1 Protein Homology CDS 136054 136491 . + 0 ID=cds-WP_001038574.1;Parent=gene-SO06_RS04240;Dbxref=GenBank:WP_001038574.1;Name=WP_001038574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=SO06_RS04240;product=STM0539 family protein;protein_id=WP_001038574.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 136488 137312 . + . ID=gene-SO06_RS04245;Name=SO06_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04245 NZ_MYDG01000002.1 Protein Homology CDS 136488 137312 . + 0 ID=cds-WP_000818111.1;Parent=gene-SO06_RS04245;Dbxref=GenBank:WP_000818111.1;Name=WP_000818111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=SO06_RS04245;product=DUF2145 domain-containing protein;protein_id=WP_000818111.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 137356 138741 . - . ID=gene-SO06_RS04250;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=SO06_RS04250 NZ_MYDG01000002.1 Protein Homology CDS 137356 138741 . - 0 ID=cds-WP_023231612.1;Parent=gene-SO06_RS04250;Dbxref=GenBank:WP_023231612.1;Name=WP_023231612.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=SO06_RS04250;product=cysteine--tRNA ligase;protein_id=WP_023231612.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 138914 139408 . + . ID=gene-SO06_RS04255;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=SO06_RS04255 NZ_MYDG01000002.1 Protein Homology CDS 138914 139408 . + 0 ID=cds-WP_000255991.1;Parent=gene-SO06_RS04255;Dbxref=GenBank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=SO06_RS04255;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 139411 140133 . + . ID=gene-SO06_RS04260;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=SO06_RS04260 NZ_MYDG01000002.1 Protein Homology CDS 139411 140133 . + 0 ID=cds-WP_000212284.1;Parent=gene-SO06_RS04260;Dbxref=GenBank:WP_000212284.1;Name=WP_000212284.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=SO06_RS04260;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212284.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 140251 140760 . + . ID=gene-SO06_RS04270;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=SO06_RS04270 NZ_MYDG01000002.1 Protein Homology CDS 140251 140760 . + 0 ID=cds-WP_000098736.1;Parent=gene-SO06_RS04270;Dbxref=GenBank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=SO06_RS04270;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 140757 141824 . + . ID=gene-SO06_RS04275;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=SO06_RS04275 NZ_MYDG01000002.1 Protein Homology CDS 140757 141824 . + 0 ID=cds-WP_000815601.1;Parent=gene-SO06_RS04275;Dbxref=GenBank:WP_000815601.1;Name=WP_000815601.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=SO06_RS04275;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815601.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 141865 142758 . - . ID=gene-SO06_RS04280;Name=SO06_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04280 NZ_MYDG01000002.1 Protein Homology CDS 141865 142758 . - 0 ID=cds-WP_000855343.1;Parent=gene-SO06_RS04280;Dbxref=GenBank:WP_000855343.1;Name=WP_000855343.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=SO06_RS04280;product=carbamate kinase;protein_id=WP_000855343.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 142762 143571 . - . ID=gene-SO06_RS04285;Name=SO06_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04285 NZ_MYDG01000002.1 Protein Homology CDS 142762 143571 . - 0 ID=cds-WP_017465363.1;Parent=gene-SO06_RS04285;Dbxref=GenBank:WP_017465363.1;Name=WP_017465363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=SO06_RS04285;product=DUF2877 domain-containing protein;protein_id=WP_017465363.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 143583 144842 . - . ID=gene-SO06_RS04290;Name=SO06_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04290 NZ_MYDG01000002.1 Protein Homology CDS 143583 144842 . - 0 ID=cds-WP_000495330.1;Parent=gene-SO06_RS04290;Dbxref=GenBank:WP_000495330.1;Name=WP_000495330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=SO06_RS04290;product=DUF1116 domain-containing protein;protein_id=WP_000495330.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 144852 146516 . - . ID=gene-SO06_RS04295;Name=SO06_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04295 NZ_MYDG01000002.1 Protein Homology CDS 144852 146516 . - 0 ID=cds-WP_080204161.1;Parent=gene-SO06_RS04295;Dbxref=GenBank:WP_080204161.1;Name=WP_080204161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=SO06_RS04295;product=acyl-CoA synthetase FdrA;protein_id=WP_080204161.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 146832 147881 . + . ID=gene-SO06_RS04300;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=SO06_RS04300 NZ_MYDG01000002.1 Protein Homology CDS 146832 147881 . + 0 ID=cds-WP_000703937.1;Parent=gene-SO06_RS04300;Dbxref=GenBank:WP_000703937.1;Name=WP_000703937.1;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=SO06_RS04300;product=ureidoglycolate dehydrogenase AllD;protein_id=WP_000703937.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 147903 149138 . + . ID=gene-SO06_RS04305;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=SO06_RS04305 NZ_MYDG01000002.1 Protein Homology CDS 147903 149138 . + 0 ID=cds-WP_000589759.1;Parent=gene-SO06_RS04305;Dbxref=GenBank:WP_000589759.1;Name=WP_000589759.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=SO06_RS04305;product=allantoate deiminase;protein_id=WP_000589759.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 149149 149934 . + . ID=gene-SO06_RS04310;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=SO06_RS04310 NZ_MYDG01000002.1 Protein Homology CDS 149149 149934 . + 0 ID=cds-WP_000540985.1;Parent=gene-SO06_RS04310;Dbxref=GenBank:WP_000540985.1;Name=WP_000540985.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=SO06_RS04310;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540985.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 150014 151162 . - . ID=gene-SO06_RS04315;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=SO06_RS04315 NZ_MYDG01000002.1 Protein Homology CDS 150014 151162 . - 0 ID=cds-WP_000706331.1;Parent=gene-SO06_RS04315;Dbxref=GenBank:WP_000706331.1;Name=WP_000706331.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=SO06_RS04315;product=glycerate 3-kinase;protein_id=WP_000706331.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 151185 152483 . - . ID=gene-SO06_RS04320;Name=SO06_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04320 NZ_MYDG01000002.1 Protein Homology CDS 151185 152483 . - 0 ID=cds-WP_080204162.1;Parent=gene-SO06_RS04320;Dbxref=GenBank:WP_080204162.1;Name=WP_080204162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=SO06_RS04320;product=uracil/xanthine transporter;protein_id=WP_080204162.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 152542 153903 . - . ID=gene-SO06_RS04325;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=SO06_RS04325 NZ_MYDG01000002.1 Protein Homology CDS 152542 153903 . - 0 ID=cds-WP_000006865.1;Parent=gene-SO06_RS04325;Dbxref=GenBank:WP_000006865.1;Name=WP_000006865.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=SO06_RS04325;product=allantoinase AllB;protein_id=WP_000006865.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 153982 155436 . - . ID=gene-SO06_RS04330;Name=SO06_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04330 NZ_MYDG01000002.1 Protein Homology CDS 153982 155436 . - 0 ID=cds-WP_000401063.1;Parent=gene-SO06_RS04330;Dbxref=GenBank:WP_000401063.1;Name=WP_000401063.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=SO06_RS04330;product=allantoin transporter;protein_id=WP_000401063.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 155532 156779 . - . ID=gene-SO06_RS04335;Name=SO06_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04335 NZ_MYDG01000002.1 Protein Homology CDS 155532 156779 . - 0 ID=cds-WP_001749004.1;Parent=gene-SO06_RS04335;Dbxref=GenBank:WP_001749004.1;Name=WP_001749004.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=SO06_RS04335;product=MFS transporter;protein_id=WP_001749004.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 156845 157723 . - . ID=gene-SO06_RS04340;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=SO06_RS04340 NZ_MYDG01000002.1 Protein Homology CDS 156845 157723 . - 0 ID=cds-WP_000765815.1;Parent=gene-SO06_RS04340;Dbxref=GenBank:WP_000765815.1;Name=WP_000765815.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=SO06_RS04340;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765815.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 157824 158600 . - . ID=gene-SO06_RS04345;Name=gip;gbkey=Gene;gene=gip;gene_biotype=protein_coding;locus_tag=SO06_RS04345 NZ_MYDG01000002.1 Protein Homology CDS 157824 158600 . - 0 ID=cds-WP_000943591.1;Parent=gene-SO06_RS04345;Dbxref=GenBank:WP_000943591.1;Name=WP_000943591.1;gbkey=CDS;gene=gip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=SO06_RS04345;product=hydroxypyruvate isomerase Gip;protein_id=WP_000943591.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 158613 160394 . - . ID=gene-SO06_RS04350;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=SO06_RS04350 NZ_MYDG01000002.1 Protein Homology CDS 158613 160394 . - 0 ID=cds-WP_001096865.1;Parent=gene-SO06_RS04350;Dbxref=GenBank:WP_001096865.1;Name=WP_001096865.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=SO06_RS04350;product=glyoxylate carboligase;protein_id=WP_001096865.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 160479 161297 . - . ID=gene-SO06_RS04355;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=SO06_RS04355 NZ_MYDG01000002.1 Protein Homology CDS 160479 161297 . - 0 ID=cds-WP_000141265.1;Parent=gene-SO06_RS04355;Dbxref=GenBank:WP_000141265.1;Name=WP_000141265.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=SO06_RS04355;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141265.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 161376 161858 . - . ID=gene-SO06_RS04360;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=SO06_RS04360 NZ_MYDG01000002.1 Protein Homology CDS 161376 161858 . - 0 ID=cds-WP_000764659.1;Parent=gene-SO06_RS04360;Dbxref=GenBank:WP_000764659.1;Name=WP_000764659.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=SO06_RS04360;product=ureidoglycolate lyase;protein_id=WP_000764659.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 162085 163011 . + . ID=gene-SO06_RS04365;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=SO06_RS04365 NZ_MYDG01000002.1 Protein Homology CDS 162085 163011 . + 0 ID=cds-WP_000460169.1;Parent=gene-SO06_RS04365;Dbxref=GenBank:WP_000460169.1;Name=WP_000460169.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=SO06_RS04365;product=HTH-type transcriptional activator AllS;protein_id=WP_000460169.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 163081 164175 . + . ID=gene-SO06_RS04370;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=SO06_RS04370 NZ_MYDG01000002.1 Protein Homology CDS 163081 164175 . + 0 ID=cds-WP_023231610.1;Parent=gene-SO06_RS04370;Dbxref=GenBank:WP_023231610.1;Name=WP_023231610.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=SO06_RS04370;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_023231610.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 164204 164863 . - . ID=gene-SO06_RS04375;Name=SO06_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04375 NZ_MYDG01000002.1 Protein Homology CDS 164204 164863 . - 0 ID=cds-WP_000342247.1;Parent=gene-SO06_RS04375;Dbxref=GenBank:WP_000342247.1;Name=WP_000342247.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=SO06_RS04375;product=methionine ABC transporter permease;protein_id=WP_000342247.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 164856 165872 . - . ID=gene-SO06_RS04380;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=SO06_RS04380 NZ_MYDG01000002.1 Protein Homology CDS 164856 165872 . - 0 ID=cds-WP_000569660.1;Parent=gene-SO06_RS04380;Dbxref=GenBank:WP_000569660.1;Name=WP_000569660.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=SO06_RS04380;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569660.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 165909 166739 . - . ID=gene-SO06_RS04385;Name=SO06_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04385 NZ_MYDG01000002.1 Protein Homology CDS 165909 166739 . - 0 ID=cds-WP_000524311.1;Parent=gene-SO06_RS04385;Dbxref=GenBank:WP_000524311.1;Name=WP_000524311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=SO06_RS04385;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000524311.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 166996 168129 . - . ID=gene-SO06_RS04390;Name=SO06_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04390 NZ_MYDG01000002.1 Protein Homology CDS 166996 168129 . - 0 ID=cds-WP_000152869.1;Parent=gene-SO06_RS04390;Dbxref=GenBank:WP_000152869.1;Name=WP_000152869.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=SO06_RS04390;product=porin;protein_id=WP_000152869.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 168316 170730 . - . ID=gene-SO06_RS04395;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=SO06_RS04395 NZ_MYDG01000002.1 Protein Homology CDS 168316 170730 . - 0 ID=cds-WP_023231838.1;Parent=gene-SO06_RS04395;Dbxref=GenBank:WP_023231838.1;Name=WP_023231838.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=SO06_RS04395;product=putative ABC transporter permease subunit YbbP;protein_id=WP_023231838.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 170727 171413 . - . ID=gene-SO06_RS04400;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=SO06_RS04400 NZ_MYDG01000002.1 Protein Homology CDS 170727 171413 . - 0 ID=cds-WP_001110598.1;Parent=gene-SO06_RS04400;Dbxref=GenBank:WP_001110598.1;Name=WP_001110598.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=SO06_RS04400;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110598.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 171384 171998 . + . ID=gene-SO06_RS04405;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=SO06_RS04405 NZ_MYDG01000002.1 Protein Homology CDS 171384 171998 . + 0 ID=cds-WP_001010574.1;Parent=gene-SO06_RS04405;Dbxref=GenBank:WP_001010574.1;Name=WP_001010574.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=SO06_RS04405;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001010574.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 172153 172923 . + . ID=gene-SO06_RS04410;Name=SO06_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04410 NZ_MYDG01000002.1 Protein Homology CDS 172153 172923 . + 0 ID=cds-WP_001172804.1;Parent=gene-SO06_RS04410;Dbxref=GenBank:WP_001172804.1;Name=WP_001172804.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=SO06_RS04410;product=SDR family oxidoreductase;protein_id=WP_001172804.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 172983 173837 . + . ID=gene-SO06_RS04415;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=SO06_RS04415 NZ_MYDG01000002.1 Protein Homology CDS 172983 173837 . + 0 ID=cds-WP_023231837.1;Parent=gene-SO06_RS04415;Dbxref=GenBank:WP_023231837.1;Name=WP_023231837.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=SO06_RS04415;product=chaperedoxin;protein_id=WP_023231837.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 173923 174702 . - . ID=gene-SO06_RS04420;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=SO06_RS04420 NZ_MYDG01000002.1 Protein Homology CDS 173923 174702 . - 0 ID=cds-WP_001002130.1;Parent=gene-SO06_RS04420;Dbxref=GenBank:WP_001002130.1;Name=WP_001002130.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=SO06_RS04420;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001002130.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 174689 175366 . - . ID=gene-SO06_RS04425;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=SO06_RS04425 NZ_MYDG01000002.1 Protein Homology CDS 174689 175366 . - 0 ID=cds-WP_000140195.1;Parent=gene-SO06_RS04425;Dbxref=GenBank:WP_000140195.1;Name=WP_000140195.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=SO06_RS04425;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_000140195.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 175513 176430 . + . ID=gene-SO06_RS04430;Name=SO06_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04430 NZ_MYDG01000002.1 Protein Homology CDS 175513 176430 . + 0 ID=cds-WP_000906146.1;Parent=gene-SO06_RS04430;Dbxref=GenBank:WP_000906146.1;Name=WP_000906146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=SO06_RS04430;product=SPFH domain-containing protein;protein_id=WP_000906146.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 176427 176879 . + . ID=gene-SO06_RS04435;Name=SO06_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04435 NZ_MYDG01000002.1 Protein Homology CDS 176427 176879 . + 0 ID=cds-WP_000561177.1;Parent=gene-SO06_RS04435;Dbxref=GenBank:WP_000561177.1;Name=WP_000561177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=SO06_RS04435;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 176880 177296 . - . ID=gene-SO06_RS04440;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=SO06_RS04440 NZ_MYDG01000002.1 Protein Homology CDS 176880 177296 . - 0 ID=cds-WP_023231836.1;Parent=gene-SO06_RS04440;Dbxref=GenBank:WP_023231836.1;Name=WP_023231836.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=SO06_RS04440;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_023231836.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 177406 179907 . + . ID=gene-SO06_RS04445;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=SO06_RS04445 NZ_MYDG01000002.1 Protein Homology CDS 177406 179907 . + 0 ID=cds-WP_000083910.1;Parent=gene-SO06_RS04445;Dbxref=GenBank:WP_000083910.1;Name=WP_000083910.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=SO06_RS04445;product=copper-exporting P-type ATPase CopA;protein_id=WP_000083910.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 180060 180887 . + . ID=gene-SO06_RS04450;Name=SO06_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04450 NZ_MYDG01000002.1 Protein Homology CDS 180060 180887 . + 0 ID=cds-WP_023231835.1;Parent=gene-SO06_RS04450;Dbxref=GenBank:WP_023231835.1;Name=WP_023231835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=SO06_RS04450;product=lysozyme inhibitor LprI family protein;protein_id=WP_023231835.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 180973 181767 . + . ID=gene-SO06_RS04455;Name=SO06_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04455 NZ_MYDG01000002.1 Protein Homology CDS 180973 181767 . + 0 ID=cds-WP_000421861.1;Parent=gene-SO06_RS04455;Dbxref=GenBank:WP_000421861.1;Name=WP_000421861.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=SO06_RS04455;product=TraB/GumN family protein;protein_id=WP_000421861.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 181969 182448 . + . ID=gene-SO06_RS04460;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=SO06_RS04460 NZ_MYDG01000002.1 Protein Homology CDS 181969 182448 . + 0 ID=cds-WP_000186618.1;Parent=gene-SO06_RS04460;Dbxref=GenBank:WP_000186618.1;Name=WP_000186618.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=SO06_RS04460;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186618.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 182565 184217 . - . ID=gene-SO06_RS04465;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=SO06_RS04465 NZ_MYDG01000002.1 Protein Homology CDS 182565 184217 . - 0 ID=cds-WP_048348766.1;Parent=gene-SO06_RS04465;Dbxref=GenBank:WP_048348766.1;Name=WP_048348766.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=SO06_RS04465;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_048348766.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 184390 185610 . + . ID=gene-SO06_RS04470;Name=SO06_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04470 NZ_MYDG01000002.1 Protein Homology CDS 184390 185610 . + 0 ID=cds-WP_001251593.1;Parent=gene-SO06_RS04470;Dbxref=GenBank:WP_001251593.1;Name=WP_001251593.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=SO06_RS04470;product=MFS transporter;protein_id=WP_001251593.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 185825 187501 . + . ID=gene-SO06_RS04475;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=SO06_RS04475 NZ_MYDG01000002.1 Protein Homology CDS 185825 187501 . + 0 ID=cds-WP_000546202.1;Parent=gene-SO06_RS04475;Dbxref=GenBank:WP_000546202.1;Name=WP_000546202.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=SO06_RS04475;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546202.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 187550 188854 . - . ID=gene-SO06_RS04480;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=SO06_RS04480 NZ_MYDG01000002.1 Protein Homology CDS 187550 188854 . - 0 ID=cds-WP_000671592.1;Parent=gene-SO06_RS04480;Dbxref=GenBank:WP_000671592.1;Name=WP_000671592.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=SO06_RS04480;product=inosine/guanosine kinase;protein_id=WP_000671592.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 189007 189978 . + . ID=gene-SO06_RS04485;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=SO06_RS04485 NZ_MYDG01000002.1 Protein Homology CDS 189007 189978 . + 0 ID=cds-WP_023231698.1;Parent=gene-SO06_RS04485;Dbxref=GenBank:WP_023231698.1;Name=WP_023231698.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=SO06_RS04485;product=acetyl esterase;protein_id=WP_023231698.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 189975 190937 . - . ID=gene-SO06_RS04490;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=SO06_RS04490 NZ_MYDG01000002.1 Protein Homology CDS 189975 190937 . - 0 ID=cds-WP_001250078.1;Parent=gene-SO06_RS04490;Dbxref=GenBank:WP_001250078.1;Name=WP_001250078.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=SO06_RS04490;product=ferrochelatase;protein_id=WP_001250078.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 191166 191810 . - . ID=gene-SO06_RS04495;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=SO06_RS04495 NZ_MYDG01000002.1 Protein Homology CDS 191166 191810 . - 0 ID=cds-WP_001220237.1;Parent=gene-SO06_RS04495;Dbxref=GenBank:WP_001220237.1;Name=WP_001220237.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=SO06_RS04495;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 192168 194042 . - . ID=gene-SO06_RS04505;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=SO06_RS04505 NZ_MYDG01000002.1 Protein Homology CDS 192168 194042 . - 0 ID=cds-WP_023231699.1;Parent=gene-SO06_RS04505;Dbxref=GenBank:WP_023231699.1;Name=WP_023231699.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=SO06_RS04505;product=molecular chaperone HtpG;protein_id=WP_023231699.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 194153 194758 . - . ID=gene-SO06_RS04510;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=SO06_RS04510 NZ_MYDG01000002.1 Protein Homology CDS 194153 194758 . - 0 ID=cds-WP_001195023.1;Parent=gene-SO06_RS04510;Dbxref=GenBank:WP_001195023.1;Name=WP_001195023.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=SO06_RS04510;product=recombination mediator RecR;protein_id=WP_001195023.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 194758 195087 . - . ID=gene-SO06_RS04515;Name=SO06_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04515 NZ_MYDG01000002.1 Protein Homology CDS 194758 195087 . - 0 ID=cds-WP_000467098.1;Parent=gene-SO06_RS04515;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=SO06_RS04515;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 195133 197061 . - . ID=gene-SO06_RS04520;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=SO06_RS04520 NZ_MYDG01000002.1 Protein Homology CDS 195133 197061 . - 0 ID=cds-WP_023231700.1;Parent=gene-SO06_RS04520;Dbxref=GenBank:WP_023231700.1;Name=WP_023231700.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=SO06_RS04520;product=DNA polymerase III subunit gamma/tau;protein_id=WP_023231700.1;transl_table=11 NZ_MYDG01000002.1 cmsearch sequence_feature 195736 195800 . - . ID=id-SO06_RS04520;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS04520 NZ_MYDG01000002.1 RefSeq gene 197175 197726 . - . ID=gene-SO06_RS04525;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=SO06_RS04525 NZ_MYDG01000002.1 Protein Homology CDS 197175 197726 . - 0 ID=cds-WP_000127350.1;Parent=gene-SO06_RS04525;Dbxref=GenBank:WP_000127350.1;Name=WP_000127350.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=SO06_RS04525;product=adenine phosphoribosyltransferase;protein_id=WP_000127350.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 197879 198256 . - . ID=gene-SO06_RS04535;Name=SO06_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04535 NZ_MYDG01000002.1 Protein Homology CDS 197879 198256 . - 0 ID=cds-WP_023231701.1;Parent=gene-SO06_RS04535;Dbxref=GenBank:WP_023231701.1;Name=WP_023231701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=SO06_RS04535;product=DUF454 family protein;protein_id=WP_023231701.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 198325 198852 . + . ID=gene-SO06_RS04540;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=SO06_RS04540 NZ_MYDG01000002.1 Protein Homology CDS 198325 198852 . + 0 ID=cds-WP_023231702.1;Parent=gene-SO06_RS04540;Dbxref=GenBank:WP_023231702.1;Name=WP_023231702.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=SO06_RS04540;product=primosomal replication protein N'';protein_id=WP_023231702.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 198866 199033 . + . ID=gene-SO06_RS04545;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=SO06_RS04545 NZ_MYDG01000002.1 Protein Homology CDS 198866 199033 . + 0 ID=cds-WP_000051161.1;Parent=gene-SO06_RS04545;Dbxref=GenBank:WP_000051161.1;Name=WP_000051161.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=SO06_RS04545;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051161.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 199103 200038 . + . ID=gene-SO06_RS04550;Name=SO06_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04550 NZ_MYDG01000002.1 Protein Homology CDS 199103 200038 . + 0 ID=cds-WP_023231703.1;Parent=gene-SO06_RS04550;Dbxref=GenBank:WP_023231703.1;Name=WP_023231703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=SO06_RS04550;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_023231703.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 200080 203442 . - . ID=gene-SO06_RS04555;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=SO06_RS04555 NZ_MYDG01000002.1 Protein Homology CDS 200080 203442 . - 0 ID=cds-WP_023231704.1;Parent=gene-SO06_RS04555;Dbxref=GenBank:WP_023231704.1;Name=WP_023231704.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=SO06_RS04555;product=mechanosensitive channel MscK;protein_id=WP_023231704.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 203561 204214 . - . ID=gene-SO06_RS04560;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=SO06_RS04560 NZ_MYDG01000002.1 Protein Homology CDS 203561 204214 . - 0 ID=cds-WP_023231705.1;Parent=gene-SO06_RS04560;Dbxref=GenBank:WP_023231705.1;Name=WP_023231705.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=SO06_RS04560;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_023231705.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 204356 205549 . + . ID=gene-SO06_RS04565;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=SO06_RS04565 NZ_MYDG01000002.1 Protein Homology CDS 204356 205549 . + 0 ID=cds-WP_023231706.1;Parent=gene-SO06_RS04565;Dbxref=GenBank:WP_023231706.1;Name=WP_023231706.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=SO06_RS04565;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_023231706.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 205572 208721 . + . ID=gene-SO06_RS04570;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=SO06_RS04570 NZ_MYDG01000002.1 Protein Homology CDS 205572 208721 . + 0 ID=cds-WP_001132508.1;Parent=gene-SO06_RS04570;Dbxref=GenBank:WP_001132508.1;Name=WP_001132508.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=SO06_RS04570;product=efflux RND transporter permease AcrB;protein_id=WP_001132508.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 209217 209591 . + . ID=gene-SO06_RS04575;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=SO06_RS04575 NZ_MYDG01000002.1 Protein Homology CDS 209217 209591 . + 0 ID=cds-WP_023231707.1;Parent=gene-SO06_RS04575;Dbxref=GenBank:WP_023231707.1;Name=WP_023231707.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=SO06_RS04575;product=Hha toxicity modulator TomB;protein_id=WP_023231707.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 209619 209837 . + . ID=gene-SO06_RS04580;Name=SO06_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04580 NZ_MYDG01000002.1 Protein Homology CDS 209619 209837 . + 0 ID=cds-WP_001280991.1;Parent=gene-SO06_RS04580;Dbxref=GenBank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=SO06_RS04580;product=HHA domain-containing protein;protein_id=WP_001280991.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 210016 210567 . + . ID=gene-SO06_RS04585;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=SO06_RS04585 NZ_MYDG01000002.1 Protein Homology CDS 210016 210567 . + 0 ID=cds-WP_001278793.1;Parent=gene-SO06_RS04585;Dbxref=GenBank:WP_001278793.1;Name=WP_001278793.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=SO06_RS04585;product=maltose O-acetyltransferase;protein_id=WP_001278793.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 210685 211155 . + . ID=gene-SO06_RS04590;Name=SO06_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04590 NZ_MYDG01000002.1 Protein Homology CDS 210685 211155 . + 0 ID=cds-WP_000136183.1;Parent=gene-SO06_RS04590;Dbxref=GenBank:WP_000136183.1;Name=WP_000136183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=SO06_RS04590;product=YlaC family protein;protein_id=WP_000136183.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 211211 211351 . - . ID=gene-SO06_RS04595;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=SO06_RS04595 NZ_MYDG01000002.1 Protein Homology CDS 211211 211351 . - 0 ID=cds-WP_001197749.1;Parent=gene-SO06_RS04595;Dbxref=GenBank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=SO06_RS04595;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 211357 211617 . - . ID=gene-SO06_RS04600;Name=SO06_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04600 NZ_MYDG01000002.1 Protein Homology CDS 211357 211617 . - 0 ID=cds-WP_000801415.1;Parent=gene-SO06_RS04600;Dbxref=GenBank:WP_000801415.1;Name=WP_000801415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=SO06_RS04600;product=type B 50S ribosomal protein L31;protein_id=WP_000801415.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 211842 213392 . + . ID=gene-SO06_RS04605;Name=SO06_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04605 NZ_MYDG01000002.1 Protein Homology CDS 211842 213392 . + 0 ID=cds-WP_023231708.1;Parent=gene-SO06_RS04605;Dbxref=GenBank:WP_023231708.1;Name=WP_023231708.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=SO06_RS04605;product=EAL domain-containing protein;protein_id=WP_023231708.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 213442 213538 . - . ID=gene-SO06_RS04610;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=SO06_RS04610 NZ_MYDG01000002.1 cmsearch SRP_RNA 213442 213538 . - . ID=rna-SO06_RS04610;Parent=gene-SO06_RS04610;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS04610;product=signal recognition particle sRNA small type NZ_MYDG01000002.1 cmsearch exon 213442 213538 . - . ID=exon-SO06_RS04610-1;Parent=rna-SO06_RS04610;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS04610;product=signal recognition particle sRNA small type NZ_MYDG01000002.1 RefSeq gene 213623 214012 . + . ID=gene-SO06_RS04615;Name=SO06_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04615 NZ_MYDG01000002.1 Protein Homology CDS 213623 214012 . + 0 ID=cds-WP_000961285.1;Parent=gene-SO06_RS04615;Dbxref=GenBank:WP_000961285.1;Name=WP_000961285.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=SO06_RS04615;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 214045 214614 . - . ID=gene-SO06_RS04620;Name=SO06_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04620 NZ_MYDG01000002.1 Protein Homology CDS 214045 214614 . - 0 ID=cds-WP_000779802.1;Parent=gene-SO06_RS04620;Dbxref=GenBank:WP_000779802.1;Name=WP_000779802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=SO06_RS04620;product=YbaY family lipoprotein;protein_id=WP_000779802.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 214829 215689 . + . ID=gene-SO06_RS04625;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=SO06_RS04625 NZ_MYDG01000002.1 Protein Homology CDS 214829 215689 . + 0 ID=cds-WP_000084176.1;Parent=gene-SO06_RS04625;Dbxref=GenBank:WP_000084176.1;Name=WP_000084176.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=SO06_RS04625;product=acyl-CoA thioesterase II;protein_id=WP_000084176.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 215789 217075 . - . ID=gene-SO06_RS04630;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=SO06_RS04630 NZ_MYDG01000002.1 Protein Homology CDS 215789 217075 . - 0 ID=cds-WP_000684912.1;Parent=gene-SO06_RS04630;Dbxref=GenBank:WP_000684912.1;Name=WP_000684912.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=SO06_RS04630;product=ammonium transporter AmtB;protein_id=WP_000684912.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 217107 217445 . - . ID=gene-SO06_RS04635;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=SO06_RS04635 NZ_MYDG01000002.1 Protein Homology CDS 217107 217445 . - 0 ID=cds-WP_000780341.1;Parent=gene-SO06_RS04635;Dbxref=GenBank:WP_000780341.1;Name=WP_000780341.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=SO06_RS04635;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 217658 219439 . - . ID=gene-SO06_RS04640;Name=SO06_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04640 NZ_MYDG01000002.1 Protein Homology CDS 217658 219439 . - 0 ID=cds-WP_023231709.1;Parent=gene-SO06_RS04640;Dbxref=GenBank:WP_023231709.1;Name=WP_023231709.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=SO06_RS04640;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_023231709.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 219432 221204 . - . ID=gene-SO06_RS04645;Name=SO06_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04645 NZ_MYDG01000002.1 Protein Homology CDS 219432 221204 . - 0 ID=cds-WP_023231710.1;Parent=gene-SO06_RS04645;Dbxref=GenBank:WP_023231710.1;Name=WP_023231710.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=SO06_RS04645;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_023231710.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 221245 221703 . - . ID=gene-SO06_RS04650;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=SO06_RS04650 NZ_MYDG01000002.1 Protein Homology CDS 221245 221703 . - 0 ID=cds-WP_000884593.1;Parent=gene-SO06_RS04650;Dbxref=GenBank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=SO06_RS04650;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 221816 222871 . + . ID=gene-SO06_RS04655;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=SO06_RS04655 NZ_MYDG01000002.1 Protein Homology CDS 221816 222871 . + 0 ID=cds-WP_072103664.1;Parent=gene-SO06_RS04655;Dbxref=GenBank:WP_072103664.1;Name=WP_072103664.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=SO06_RS04655;product=cysteine desulfhydrase;protein_id=WP_072103664.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 222921 223739 . - . ID=gene-SO06_RS04660;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=SO06_RS04660 NZ_MYDG01000002.1 Protein Homology CDS 222921 223739 . - 0 ID=cds-WP_023231712.1;Parent=gene-SO06_RS04660;Dbxref=GenBank:WP_023231712.1;Name=WP_023231712.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=SO06_RS04660;product=HMP-PP phosphatase;protein_id=WP_023231712.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 223840 225540 . + . ID=gene-SO06_RS04665;Name=SO06_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04665 NZ_MYDG01000002.1 Protein Homology CDS 223840 225540 . + 0 ID=cds-WP_001238174.1;Parent=gene-SO06_RS04665;Dbxref=GenBank:WP_001238174.1;Name=WP_001238174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=SO06_RS04665;product=SgrR family transcriptional regulator;protein_id=WP_001238174.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 225605 226300 . + . ID=gene-SO06_RS04670;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=SO06_RS04670 NZ_MYDG01000002.1 Protein Homology CDS 225605 226300 . + 0 ID=cds-WP_000817201.1;Parent=gene-SO06_RS04670;Dbxref=GenBank:WP_000817201.1;Name=WP_000817201.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=SO06_RS04670;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817201.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 226407 226805 . - . ID=gene-SO06_RS04675;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=SO06_RS04675 NZ_MYDG01000002.1 Protein Homology CDS 226407 226805 . - 0 ID=cds-WP_001194543.1;Parent=gene-SO06_RS04675;Dbxref=GenBank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=SO06_RS04675;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 226909 227283 . - . ID=gene-SO06_RS04680;Name=SO06_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04680 NZ_MYDG01000002.1 Protein Homology CDS 226909 227283 . - 0 ID=cds-WP_000680322.1;Parent=gene-SO06_RS04680;Dbxref=GenBank:WP_000680322.1;Name=WP_000680322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=SO06_RS04680;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680322.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 227433 229304 . - . ID=gene-SO06_RS04685;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=SO06_RS04685 NZ_MYDG01000002.1 Protein Homology CDS 227433 229304 . - 0 ID=cds-WP_000969434.1;Parent=gene-SO06_RS04685;Dbxref=GenBank:WP_000969434.1;Name=WP_000969434.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=SO06_RS04685;product=peptidylprolyl isomerase;protein_id=WP_000969434.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 229595 229885 . - . ID=gene-SO06_RS04690;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=SO06_RS04690 NZ_MYDG01000002.1 Protein Homology CDS 229595 229885 . - 0 ID=cds-WP_254888479.1;Parent=gene-SO06_RS04690;Dbxref=GenBank:WP_254888479.1;Name=WP_254888479.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=SO06_RS04690;product=nucleoid-associated protein HU-beta;protein_id=WP_254888479.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 230076 232430 . - . ID=gene-SO06_RS04695;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=SO06_RS04695 NZ_MYDG01000002.1 Protein Homology CDS 230076 232430 . - 0 ID=cds-WP_001067728.1;Parent=gene-SO06_RS04695;Dbxref=GenBank:WP_001067728.1;Name=WP_001067728.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=SO06_RS04695;product=endopeptidase La;protein_id=WP_001067728.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 232616 233887 . - . ID=gene-SO06_RS04700;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=SO06_RS04700 NZ_MYDG01000002.1 Protein Homology CDS 232616 233887 . - 0 ID=cds-WP_023231261.1;Parent=gene-SO06_RS04700;Dbxref=GenBank:WP_023231261.1;Name=WP_023231261.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=SO06_RS04700;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_023231261.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 234139 234762 . - . ID=gene-SO06_RS04705;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=SO06_RS04705 NZ_MYDG01000002.1 Protein Homology CDS 234139 234762 . - 0 ID=cds-WP_000122257.1;Parent=gene-SO06_RS04705;Dbxref=GenBank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=SO06_RS04705;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 235009 236307 . - . ID=gene-SO06_RS04710;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=SO06_RS04710 NZ_MYDG01000002.1 Protein Homology CDS 235009 236307 . - 0 ID=cds-WP_001198403.1;Parent=gene-SO06_RS04710;Dbxref=GenBank:WP_001198403.1;Name=WP_001198403.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=SO06_RS04710;product=trigger factor;protein_id=WP_001198403.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 236654 236971 . - . ID=gene-SO06_RS04720;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=SO06_RS04720 NZ_MYDG01000002.1 Protein Homology CDS 236654 236971 . - 0 ID=cds-WP_000973433.1;Parent=gene-SO06_RS04720;Dbxref=GenBank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=SO06_RS04720;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 237275 237853 . + . ID=gene-SO06_RS04730;Name=SO06_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04730 NZ_MYDG01000002.1 Protein Homology CDS 237275 237853 . + 0 ID=cds-WP_001537832.1;Parent=gene-SO06_RS04730;Dbxref=GenBank:WP_001537832.1;Name=WP_001537832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=SO06_RS04730;product=lipoprotein;protein_id=WP_001537832.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 237897 239372 . + . ID=gene-SO06_RS04735;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=SO06_RS04735 NZ_MYDG01000002.1 Protein Homology CDS 237897 239372 . + 0 ID=cds-WP_000098472.1;Parent=gene-SO06_RS04735;Dbxref=GenBank:WP_000098472.1;Name=WP_000098472.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=SO06_RS04735;product=muropeptide MFS transporter AmpG;protein_id=WP_000098472.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 239825 240781 . + . ID=gene-SO06_RS04740;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=SO06_RS04740 NZ_MYDG01000002.1 Protein Homology CDS 239825 240781 . + 0 ID=cds-WP_001239449.1;Parent=gene-SO06_RS04740;Dbxref=GenBank:WP_001239449.1;Name=WP_001239449.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=SO06_RS04740;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239449.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 240792 242783 . + . ID=gene-SO06_RS04745;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=SO06_RS04745 NZ_MYDG01000002.1 Protein Homology CDS 240792 242783 . + 0 ID=cds-WP_000467158.1;Parent=gene-SO06_RS04745;Dbxref=GenBank:WP_000467158.1;Name=WP_000467158.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=SO06_RS04745;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467158.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 242773 243387 . + . ID=gene-SO06_RS04750;Name=SO06_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04750 NZ_MYDG01000002.1 Protein Homology CDS 242773 243387 . + 0 ID=cds-WP_000179833.1;Parent=gene-SO06_RS04750;Dbxref=GenBank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=SO06_RS04750;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 243387 243716 . + . ID=gene-SO06_RS04755;Name=SO06_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04755 NZ_MYDG01000002.1 Protein Homology CDS 243387 243716 . + 0 ID=cds-WP_000019878.1;Parent=gene-SO06_RS04755;Dbxref=GenBank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=SO06_RS04755;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 243728 244618 . + . ID=gene-SO06_RS04760;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=SO06_RS04760 NZ_MYDG01000002.1 Protein Homology CDS 243728 244618 . + 0 ID=cds-WP_000971352.1;Parent=gene-SO06_RS04760;Dbxref=GenBank:WP_000971352.1;Name=WP_000971352.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=SO06_RS04760;product=heme o synthase;protein_id=WP_000971352.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 244704 246194 . - . ID=gene-SO06_RS04765;Name=SO06_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04765 NZ_MYDG01000002.1 Protein Homology CDS 244704 246194 . - 0 ID=cds-WP_023231317.1;Parent=gene-SO06_RS04765;Dbxref=GenBank:WP_023231317.1;Name=WP_023231317.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595318.1;locus_tag=SO06_RS04765;product=SEL1-like repeat protein;protein_id=WP_023231317.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 246206 247717 . - . ID=gene-SO06_RS04770;Name=SO06_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04770 NZ_MYDG01000002.1 Protein Homology CDS 246206 247717 . - 0 ID=cds-WP_023231318.1;Parent=gene-SO06_RS04770;Dbxref=GenBank:WP_023231318.1;Name=WP_023231318.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=SO06_RS04770;product=SEL1-like repeat protein;protein_id=WP_023231318.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 247892 248023 . + . ID=gene-SO06_RS25445;Name=SO06_RS25445;end_range=248023,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25445;partial=true;pseudo=true NZ_MYDG01000002.1 Protein Homology CDS 247892 248023 . + 0 ID=cds-SO06_RS25445;Parent=gene-SO06_RS25445;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=248023,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1;locus_tag=SO06_RS25445;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 248254 249618 . + . ID=gene-SO06_RS04780;Name=SO06_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04780 NZ_MYDG01000002.1 Protein Homology CDS 248254 249618 . + 0 ID=cds-WP_001000938.1;Parent=gene-SO06_RS04780;Dbxref=GenBank:WP_001000938.1;Name=WP_001000938.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=SO06_RS04780;product=MFS transporter;protein_id=WP_001000938.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 249665 250156 . - . ID=gene-SO06_RS04785;Name=SO06_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04785 NZ_MYDG01000002.1 Protein Homology CDS 249665 250156 . - 0 ID=cds-WP_001138913.1;Parent=gene-SO06_RS04785;Dbxref=GenBank:WP_001138913.1;Name=WP_001138913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=SO06_RS04785;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_001138913.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 250282 251193 . + . ID=gene-SO06_RS04790;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=SO06_RS04790 NZ_MYDG01000002.1 Protein Homology CDS 250282 251193 . + 0 ID=cds-WP_000705816.1;Parent=gene-SO06_RS04790;Dbxref=GenBank:WP_000705816.1;Name=WP_000705816.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=SO06_RS04790;product=2-dehydropantoate 2-reductase;protein_id=WP_000705816.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 251156 251746 . + . ID=gene-SO06_RS04795;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=SO06_RS04795 NZ_MYDG01000002.1 Protein Homology CDS 251156 251746 . + 0 ID=cds-WP_001275807.1;Parent=gene-SO06_RS04795;Dbxref=GenBank:WP_001275807.1;Name=WP_001275807.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=SO06_RS04795;product=protein deglycase YajL;protein_id=WP_001275807.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 251843 252652 . - . ID=gene-SO06_RS04800;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=SO06_RS04800 NZ_MYDG01000002.1 Protein Homology CDS 251843 252652 . - 0 ID=cds-WP_023231319.1;Parent=gene-SO06_RS04800;Dbxref=GenBank:WP_023231319.1;Name=WP_023231319.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;gene=phnX;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=SO06_RS04800;product=phosphonoacetaldehyde hydrolase;protein_id=WP_023231319.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 252662 253765 . - . ID=gene-SO06_RS04805;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=SO06_RS04805 NZ_MYDG01000002.1 Protein Homology CDS 252662 253765 . - 0 ID=cds-WP_023231320.1;Parent=gene-SO06_RS04805;Dbxref=GenBank:WP_023231320.1;Name=WP_023231320.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=SO06_RS04805;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_023231320.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 253905 254624 . + . ID=gene-SO06_RS04810;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=SO06_RS04810 NZ_MYDG01000002.1 Protein Homology CDS 253905 254624 . + 0 ID=cds-WP_000836268.1;Parent=gene-SO06_RS04810;Dbxref=GenBank:WP_000836268.1;Name=WP_000836268.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=SO06_RS04810;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_000836268.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 254822 255835 . + . ID=gene-SO06_RS04815;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=SO06_RS04815 NZ_MYDG01000002.1 Protein Homology CDS 254822 255835 . + 0 ID=cds-WP_023231321.1;Parent=gene-SO06_RS04815;Dbxref=GenBank:WP_023231321.1;Name=WP_023231321.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=SO06_RS04815;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_023231321.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 255841 256950 . + . ID=gene-SO06_RS04820;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=SO06_RS04820 NZ_MYDG01000002.1 Protein Homology CDS 255841 256950 . + 0 ID=cds-WP_023231322.1;Parent=gene-SO06_RS04820;Dbxref=GenBank:WP_023231322.1;Name=WP_023231322.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=SO06_RS04820;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_023231322.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 256953 257822 . + . ID=gene-SO06_RS04825;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=SO06_RS04825 NZ_MYDG01000002.1 Protein Homology CDS 256953 257822 . + 0 ID=cds-WP_001658871.1;Parent=gene-SO06_RS04825;Dbxref=GenBank:WP_001658871.1;Name=WP_001658871.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052714.1;locus_tag=SO06_RS04825;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_001658871.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 257816 258613 . + . ID=gene-SO06_RS04830;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=SO06_RS04830 NZ_MYDG01000002.1 Protein Homology CDS 257816 258613 . + 0 ID=cds-WP_023231323.1;Parent=gene-SO06_RS04830;Dbxref=GenBank:WP_023231323.1;Name=WP_023231323.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=SO06_RS04830;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_023231323.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 258656 260104 . - . ID=gene-SO06_RS04835;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=SO06_RS04835 NZ_MYDG01000002.1 Protein Homology CDS 258656 260104 . - 0 ID=cds-WP_000668649.1;Parent=gene-SO06_RS04835;Dbxref=GenBank:WP_000668649.1;Name=WP_000668649.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=SO06_RS04835;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668649.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 260314 260556 . + . ID=gene-SO06_RS04840;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=SO06_RS04840 NZ_MYDG01000002.1 Protein Homology CDS 260314 260556 . + 0 ID=cds-WP_001124944.1;Parent=gene-SO06_RS04840;Dbxref=GenBank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=SO06_RS04840;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 260557 261456 . + . ID=gene-SO06_RS04845;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=SO06_RS04845 NZ_MYDG01000002.1 Protein Homology CDS 260557 261456 . + 0 ID=cds-WP_000348074.1;Parent=gene-SO06_RS04845;Dbxref=GenBank:WP_000348074.1;Name=WP_000348074.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=SO06_RS04845;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348074.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 261480 263342 . + . ID=gene-SO06_RS04850;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=SO06_RS04850 NZ_MYDG01000002.1 Protein Homology CDS 261480 263342 . + 0 ID=cds-WP_000006777.1;Parent=gene-SO06_RS04850;Dbxref=GenBank:WP_000006777.1;Name=WP_000006777.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=SO06_RS04850;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006777.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 263399 264373 . + . ID=gene-SO06_RS04855;Name=SO06_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04855 NZ_MYDG01000002.1 Protein Homology CDS 263399 264373 . + 0 ID=cds-WP_001199869.1;Parent=gene-SO06_RS04855;Dbxref=GenBank:WP_001199869.1;Name=WP_001199869.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=SO06_RS04855;product=aldo/keto reductase;protein_id=WP_001199869.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 264381 264472 . + . ID=gene-SO06_RS25755;Name=SO06_RS25755;end_range=264472,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25755;partial=true;pseudo=true;start_range=.,264381 NZ_MYDG01000002.1 Protein Homology CDS 264381 264472 . + 0 ID=cds-SO06_RS25755;Parent=gene-SO06_RS25755;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=264472,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=SO06_RS25755;partial=true;product=hypothetical protein;pseudo=true;start_range=.,264381;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 264477 264992 . - . ID=gene-SO06_RS04860;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=SO06_RS04860 NZ_MYDG01000002.1 Protein Homology CDS 264477 264992 . - 0 ID=cds-WP_000154063.1;Parent=gene-SO06_RS04860;Dbxref=GenBank:WP_000154063.1;Name=WP_000154063.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=SO06_RS04860;product=phosphatidylglycerophosphatase A;protein_id=WP_000154063.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 264970 265950 . - . ID=gene-SO06_RS04865;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=SO06_RS04865 NZ_MYDG01000002.1 Protein Homology CDS 264970 265950 . - 0 ID=cds-WP_000752133.1;Parent=gene-SO06_RS04865;Dbxref=GenBank:WP_000752133.1;Name=WP_000752133.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=SO06_RS04865;product=thiamine-phosphate kinase;protein_id=WP_000752133.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 266032 266451 . - . ID=gene-SO06_RS04870;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=SO06_RS04870 NZ_MYDG01000002.1 Protein Homology CDS 266032 266451 . - 0 ID=cds-WP_000801129.1;Parent=gene-SO06_RS04870;Dbxref=GenBank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=SO06_RS04870;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 266472 266942 . - . ID=gene-SO06_RS04875;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=SO06_RS04875 NZ_MYDG01000002.1 Protein Homology CDS 266472 266942 . - 0 ID=cds-WP_001021372.1;Parent=gene-SO06_RS04875;Dbxref=GenBank:WP_001021372.1;Name=WP_001021372.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=SO06_RS04875;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021372.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 267031 268134 . - . ID=gene-SO06_RS04880;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=SO06_RS04880 NZ_MYDG01000002.1 Protein Homology CDS 267031 268134 . - 0 ID=cds-WP_001150229.1;Parent=gene-SO06_RS04880;Dbxref=GenBank:WP_001150229.1;Name=WP_001150229.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=SO06_RS04880;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150229.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 268138 268587 . - . ID=gene-SO06_RS04885;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=SO06_RS04885 NZ_MYDG01000002.1 Protein Homology CDS 268138 268587 . - 0 ID=cds-WP_000543533.1;Parent=gene-SO06_RS04885;Dbxref=GenBank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=SO06_RS04885;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 268739 269278 . + . ID=gene-SO06_RS04890;Name=SO06_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04890 NZ_MYDG01000002.1 Protein Homology CDS 268739 269278 . + 0 ID=cds-WP_000198486.1;Parent=gene-SO06_RS04890;Dbxref=GenBank:WP_000198486.1;Name=WP_000198486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=SO06_RS04890;product=DUF3251 domain-containing protein;protein_id=WP_000198486.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 269578 270441 . + . ID=gene-SO06_RS04895;Name=SO06_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04895 NZ_MYDG01000002.1 Protein Homology CDS 269578 270441 . + 0 ID=cds-WP_000752021.1;Parent=gene-SO06_RS04895;Dbxref=GenBank:WP_000752021.1;Name=WP_000752021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=SO06_RS04895;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_000752021.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 270525 270632 . - . ID=gene-SO06_RS25670;Name=SO06_RS25670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25670 NZ_MYDG01000002.1 Protein Homology CDS 270525 270632 . - 0 ID=cds-WP_000176312.1;Parent=gene-SO06_RS25670;Dbxref=GenBank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=SO06_RS25670;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 271070 271417 . - . ID=gene-SO06_RS04910;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=SO06_RS04910 NZ_MYDG01000002.1 Protein Homology CDS 271070 271417 . - 0 ID=cds-WP_000974818.1;Parent=gene-SO06_RS04910;Dbxref=GenBank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=SO06_RS04910;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 271511 272482 . - . ID=gene-SO06_RS04915;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=SO06_RS04915 NZ_MYDG01000002.1 Protein Homology CDS 271511 272482 . - 0 ID=cds-WP_000046629.1;Parent=gene-SO06_RS04915;Dbxref=GenBank:WP_000046629.1;Name=WP_000046629.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=SO06_RS04915;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 272493 274340 . - . ID=gene-SO06_RS04920;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=SO06_RS04920 NZ_MYDG01000002.1 Protein Homology CDS 272493 274340 . - 0 ID=cds-WP_000934811.1;Parent=gene-SO06_RS04920;Dbxref=GenBank:WP_000934811.1;Name=WP_000934811.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=SO06_RS04920;product=protein translocase subunit SecD;protein_id=WP_000934811.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 274368 274700 . - . ID=gene-SO06_RS04925;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=SO06_RS04925 NZ_MYDG01000002.1 Protein Homology CDS 274368 274700 . - 0 ID=cds-WP_000007628.1;Parent=gene-SO06_RS04925;Dbxref=GenBank:WP_000007628.1;Name=WP_000007628.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=SO06_RS04925;product=preprotein translocase subunit YajC;protein_id=WP_000007628.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 274723 275850 . - . ID=gene-SO06_RS04930;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=SO06_RS04930 NZ_MYDG01000002.1 Protein Homology CDS 274723 275850 . - 0 ID=cds-WP_000667305.1;Parent=gene-SO06_RS04930;Dbxref=GenBank:WP_000667305.1;Name=WP_000667305.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=SO06_RS04930;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667305.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 276047 277111 . - . ID=gene-SO06_RS04940;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=SO06_RS04940 NZ_MYDG01000002.1 Protein Homology CDS 276047 277111 . - 0 ID=cds-WP_023232057.1;Parent=gene-SO06_RS04940;Dbxref=GenBank:WP_023232057.1;Name=WP_023232057.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=SO06_RS04940;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_023232057.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 277205 277786 . + . ID=gene-SO06_RS04945;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=SO06_RS04945 NZ_MYDG01000002.1 Protein Homology CDS 277205 277786 . + 0 ID=cds-WP_001009858.1;Parent=gene-SO06_RS04945;Dbxref=GenBank:WP_001009858.1;Name=WP_001009858.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=SO06_RS04945;product=ACP phosphodiesterase;protein_id=WP_001009858.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 277996 278598 . + . ID=gene-SO06_RS04950;Name=SO06_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS04950 NZ_MYDG01000002.1 Protein Homology CDS 277996 278598 . + 0 ID=cds-WP_000244731.1;Parent=gene-SO06_RS04950;Dbxref=GenBank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=SO06_RS04950;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 278670 280487 . - . ID=gene-SO06_RS04955;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=SO06_RS04955 NZ_MYDG01000002.1 Protein Homology CDS 278670 280487 . - 0 ID=cds-WP_023232056.1;Parent=gene-SO06_RS04955;Dbxref=GenBank:WP_023232056.1;Name=WP_023232056.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=SO06_RS04955;product=maltodextrin glucosidase;protein_id=WP_023232056.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 280649 282019 . - . ID=gene-SO06_RS04960;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=SO06_RS04960 NZ_MYDG01000002.1 Protein Homology CDS 280649 282019 . - 0 ID=cds-WP_000445556.1;Parent=gene-SO06_RS04960;Dbxref=GenBank:WP_000445556.1;Name=WP_000445556.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=SO06_RS04960;product=proline-specific permease ProY;protein_id=WP_000445556.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 282094 283413 . - . ID=gene-SO06_RS04965;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=SO06_RS04965 NZ_MYDG01000002.1 Protein Homology CDS 282094 283413 . - 0 ID=cds-WP_000149625.1;Parent=gene-SO06_RS04965;Dbxref=GenBank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=SO06_RS04965;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 283822 285117 . - . ID=gene-SO06_RS04970;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=SO06_RS04970 NZ_MYDG01000002.1 Protein Homology CDS 283822 285117 . - 0 ID=cds-WP_023232055.1;Parent=gene-SO06_RS04970;Dbxref=GenBank:WP_023232055.1;Name=WP_023232055.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=SO06_RS04970;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_023232055.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 285187 285876 . - . ID=gene-SO06_RS04975;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=SO06_RS04975 NZ_MYDG01000002.1 Protein Homology CDS 285187 285876 . - 0 ID=cds-WP_000113921.1;Parent=gene-SO06_RS04975;Dbxref=GenBank:WP_000113921.1;Name=WP_000113921.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=SO06_RS04975;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113921.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 286091 287293 . + . ID=gene-SO06_RS04980;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=SO06_RS04980 NZ_MYDG01000002.1 Protein Homology CDS 286091 287293 . + 0 ID=cds-WP_023232054.1;Parent=gene-SO06_RS04980;Dbxref=GenBank:WP_023232054.1;Name=WP_023232054.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=SO06_RS04980;product=exonuclease subunit SbcD;protein_id=WP_023232054.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 287290 290430 . + . ID=gene-SO06_RS04985;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=SO06_RS04985 NZ_MYDG01000002.1 Protein Homology CDS 287290 290430 . + 0 ID=cds-WP_001748989.1;Parent=gene-SO06_RS04985;Dbxref=GenBank:WP_001748989.1;Name=WP_001748989.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=SO06_RS04985;product=exonuclease subunit SbcC;protein_id=WP_001748989.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 290602 291774 . + . ID=gene-SO06_RS04990;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=SO06_RS04990 NZ_MYDG01000002.1 Protein Homology CDS 290602 291774 . + 0 ID=cds-WP_000755630.1;Parent=gene-SO06_RS04990;Dbxref=GenBank:WP_000755630.1;Name=WP_000755630.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=SO06_RS04990;product=MFS transporter AraJ;protein_id=WP_000755630.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 291796 292704 . - . ID=gene-SO06_RS04995;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=SO06_RS04995 NZ_MYDG01000002.1 Protein Homology CDS 291796 292704 . - 0 ID=cds-WP_023232052.1;Parent=gene-SO06_RS04995;Dbxref=GenBank:WP_023232052.1;Name=WP_023232052.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=SO06_RS04995;product=fructokinase;protein_id=WP_023232052.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 292830 293741 . + . ID=gene-SO06_RS05000;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=SO06_RS05000 NZ_MYDG01000002.1 Protein Homology CDS 292830 293741 . + 0 ID=cds-WP_000964305.1;Parent=gene-SO06_RS05000;Dbxref=GenBank:WP_000964305.1;Name=WP_000964305.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=SO06_RS05000;product=recombination-associated protein RdgC;protein_id=WP_000964305.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 293779 294063 . - . ID=gene-SO06_RS05005;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=SO06_RS05005 NZ_MYDG01000002.1 Protein Homology CDS 293779 294063 . - 0 ID=cds-WP_023224693.1;Parent=gene-SO06_RS05005;Dbxref=GenBank:WP_023224693.1;Name=WP_023224693.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=SO06_RS05005;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_023224693.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 294134 294811 . - . ID=gene-SO06_RS05010;Name=SO06_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05010 NZ_MYDG01000002.1 Protein Homology CDS 294134 294811 . - 0 ID=cds-WP_001276437.1;Parent=gene-SO06_RS05010;Dbxref=GenBank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=SO06_RS05010;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 295062 295253 . - . ID=gene-SO06_RS05015;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=SO06_RS05015 NZ_MYDG01000002.1 Protein Homology CDS 295062 295253 . - 0 ID=cds-WP_001143161.1;Parent=gene-SO06_RS05015;Dbxref=GenBank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=SO06_RS05015;product=protein YaiA;protein_id=WP_001143161.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 295280 295825 . - . ID=gene-SO06_RS05020;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=SO06_RS05020 NZ_MYDG01000002.1 Protein Homology CDS 295280 295825 . - 0 ID=cds-WP_000983570.1;Parent=gene-SO06_RS05020;Dbxref=GenBank:WP_000983570.1;Name=WP_000983570.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=SO06_RS05020;product=shikimate kinase AroL;protein_id=WP_000983570.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 296010 296465 . - . ID=gene-SO06_RS05025;Name=SO06_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05025 NZ_MYDG01000002.1 Protein Homology CDS 296010 296465 . - 0 ID=cds-WP_000158134.1;Parent=gene-SO06_RS05025;Dbxref=GenBank:WP_000158134.1;Name=WP_000158134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=SO06_RS05025;product=YaiI/YqxD family protein;protein_id=WP_000158134.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 296605 297414 . + . ID=gene-SO06_RS05030;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=SO06_RS05030 NZ_MYDG01000002.1 Protein Homology CDS 296605 297414 . + 0 ID=cds-WP_000412193.1;Parent=gene-SO06_RS05030;Dbxref=GenBank:WP_000412193.1;Name=WP_000412193.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=SO06_RS05030;product=pyrroline-5-carboxylate reductase;protein_id=WP_000412193.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 297429 298541 . - . ID=gene-SO06_RS05035;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=SO06_RS05035 NZ_MYDG01000002.1 Protein Homology CDS 297429 298541 . - 0 ID=cds-WP_000484097.1;Parent=gene-SO06_RS05035;Dbxref=GenBank:WP_000484097.1;Name=WP_000484097.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=SO06_RS05035;product=diguanylate cyclase AdrA;protein_id=WP_000484097.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 298633 298953 . - . ID=gene-SO06_RS05040;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=SO06_RS05040 NZ_MYDG01000002.1 Protein Homology CDS 298633 298953 . - 0 ID=cds-WP_000705165.1;Parent=gene-SO06_RS05040;Dbxref=GenBank:WP_000705165.1;Name=WP_000705165.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=SO06_RS05040;product=phosphate starvation-inducible protein PsiF;protein_id=WP_000705165.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 299302 299562 . - . ID=gene-SO06_RS05045;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=SO06_RS05045 NZ_MYDG01000002.1 Protein Homology CDS 299302 299562 . - 0 ID=cds-WP_001518423.1;Parent=gene-SO06_RS05045;Dbxref=GenBank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=SO06_RS05045;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 299859 301070 . - . ID=gene-SO06_RS05050;Name=SO06_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05050 NZ_MYDG01000002.1 Protein Homology CDS 299859 301070 . - 0 ID=cds-WP_000446772.1;Parent=gene-SO06_RS05050;Dbxref=GenBank:WP_000446772.1;Name=WP_000446772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=SO06_RS05050;product=multidrug efflux MFS transporter;protein_id=WP_000446772.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 301239 301952 . - . ID=gene-SO06_RS05055;Name=SO06_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05055 NZ_MYDG01000002.1 Protein Homology CDS 301239 301952 . - 0 ID=cds-WP_000480794.1;Parent=gene-SO06_RS05055;Dbxref=GenBank:WP_000480794.1;Name=WP_000480794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=SO06_RS05055;product=extensin-like domain-containing protein;protein_id=WP_000480794.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 302030 303124 . + . ID=gene-SO06_RS05060;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=SO06_RS05060 NZ_MYDG01000002.1 Protein Homology CDS 302030 303124 . + 0 ID=cds-WP_001096588.1;Parent=gene-SO06_RS05060;Dbxref=GenBank:WP_001096588.1;Name=WP_001096588.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=SO06_RS05060;product=D-alanine--D-alanine ligase;protein_id=WP_001096588.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 303150 303365 . - . ID=gene-SO06_RS05065;Name=SO06_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05065 NZ_MYDG01000002.1 Protein Homology CDS 303150 303365 . - 0 ID=cds-WP_001239242.1;Parent=gene-SO06_RS05065;Dbxref=GenBank:WP_001239242.1;Name=WP_001239242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=SO06_RS05065;product=DUF2754 family protein;protein_id=WP_001239242.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 303633 303941 . + . ID=gene-SO06_RS05070;Name=SO06_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05070 NZ_MYDG01000002.1 Protein Homology CDS 303633 303941 . + 0 ID=cds-WP_000763139.1;Parent=gene-SO06_RS05070;Dbxref=GenBank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=SO06_RS05070;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 303979 305073 . - . ID=gene-SO06_RS05075;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=SO06_RS05075 NZ_MYDG01000002.1 Protein Homology CDS 303979 305073 . - 0 ID=cds-WP_023232050.1;Parent=gene-SO06_RS05075;Dbxref=GenBank:WP_023232050.1;Name=WP_023232050.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=SO06_RS05075;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_023232050.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 305088 306308 . - . ID=gene-SO06_RS05080;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=SO06_RS05080 NZ_MYDG01000002.1 Protein Homology CDS 305088 306308 . - 0 ID=cds-WP_000477023.1;Parent=gene-SO06_RS05080;Dbxref=GenBank:WP_000477023.1;Name=WP_000477023.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=SO06_RS05080;product=peptide antibiotic transporter SbmA;protein_id=WP_000477023.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 306655 307812 . + . ID=gene-SO06_RS05090;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=SO06_RS05090 NZ_MYDG01000002.1 Protein Homology CDS 306655 307812 . + 0 ID=cds-WP_000830777.1;Parent=gene-SO06_RS05090;Dbxref=GenBank:WP_000830777.1;Name=WP_000830777.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=SO06_RS05090;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830777.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 307856 308479 . - . ID=gene-SO06_RS05095;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=SO06_RS05095 NZ_MYDG01000002.1 Protein Homology CDS 307856 308479 . - 0 ID=cds-WP_000950242.1;Parent=gene-SO06_RS05095;Dbxref=GenBank:WP_000950242.1;Name=WP_000950242.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=SO06_RS05095;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950242.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 308565 311510 . - . ID=gene-SO06_RS05100;Name=SO06_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05100 NZ_MYDG01000002.1 Protein Homology CDS 308565 311510 . - 0 ID=cds-WP_023232049.1;Parent=gene-SO06_RS05100;Dbxref=GenBank:WP_023232049.1;Name=WP_023232049.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=SO06_RS05100;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_023232049.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 312023 312997 . + . ID=gene-SO06_RS05105;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=SO06_RS05105 NZ_MYDG01000002.1 Protein Homology CDS 312023 312997 . + 0 ID=cds-WP_000130728.1;Parent=gene-SO06_RS05105;Dbxref=GenBank:WP_000130728.1;Name=WP_000130728.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=SO06_RS05105;product=porphobilinogen synthase;protein_id=WP_000130728.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 313101 314987 . - . ID=gene-SO06_RS05110;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=SO06_RS05110 NZ_MYDG01000002.1 Protein Homology CDS 313101 314987 . - 0 ID=cds-WP_023232048.1;Parent=gene-SO06_RS05110;Dbxref=GenBank:WP_023232048.1;Name=WP_023232048.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=SO06_RS05110;product=propionate--CoA ligase;protein_id=WP_023232048.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 315028 316479 . - . ID=gene-SO06_RS05115;Name=SO06_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05115 NZ_MYDG01000002.1 Protein Homology CDS 315028 316479 . - 0 ID=cds-WP_010835256.1;Parent=gene-SO06_RS05115;Dbxref=GenBank:WP_010835256.1;Name=WP_010835256.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=SO06_RS05115;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_010835256.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 316519 317688 . - . ID=gene-SO06_RS05120;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=SO06_RS05120 NZ_MYDG01000002.1 Protein Homology CDS 316519 317688 . - 0 ID=cds-WP_000132746.1;Parent=gene-SO06_RS05120;Dbxref=GenBank:WP_000132746.1;Name=WP_000132746.1;Ontology_term=GO:0019679,GO:0036440,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate synthase activity|0036440||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=SO06_RS05120;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_000132746.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 317811 318698 . - . ID=gene-SO06_RS05125;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=SO06_RS05125 NZ_MYDG01000002.1 Protein Homology CDS 317811 318698 . - 0 ID=cds-WP_023231393.1;Parent=gene-SO06_RS05125;Dbxref=GenBank:WP_023231393.1;Name=WP_023231393.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=SO06_RS05125;product=methylisocitrate lyase;protein_id=WP_023231393.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 318964 320589 . + . ID=gene-SO06_RS05130;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=SO06_RS05130 NZ_MYDG01000002.1 Protein Homology CDS 318964 320589 . + 0 ID=cds-WP_023231392.1;Parent=gene-SO06_RS05130;Dbxref=GenBank:WP_023231392.1;Name=WP_023231392.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=SO06_RS05130;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_023231392.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 320725 321000 . - . ID=gene-SO06_RS05135;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=SO06_RS05135 NZ_MYDG01000002.1 Protein Homology CDS 320725 321000 . - 0 ID=cds-WP_000848026.1;Parent=gene-SO06_RS05135;Dbxref=GenBank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=SO06_RS05135;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000848026.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 321232 321864 . + . ID=gene-SO06_RS05140;Name=SO06_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05140 NZ_MYDG01000002.1 Protein Homology CDS 321232 321864 . + 0 ID=cds-WP_000433131.1;Parent=gene-SO06_RS05140;Dbxref=GenBank:WP_000433131.1;Name=WP_000433131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=SO06_RS05140;product=LysE family transporter;protein_id=WP_000433131.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 321905 324013 . - . ID=gene-SO06_RS05145;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=SO06_RS05145 NZ_MYDG01000002.1 Protein Homology CDS 321905 324013 . - 0 ID=cds-WP_109821309.1;Parent=gene-SO06_RS05145;Dbxref=GenBank:WP_109821309.1;Name=WP_109821309.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=SO06_RS05145;product=ferrioxamine B receptor FoxA;protein_id=WP_109821309.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 324159 325163 . - . ID=gene-SO06_RS05150;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=SO06_RS05150 NZ_MYDG01000002.1 Protein Homology CDS 324159 325163 . - 0 ID=cds-WP_000074609.1;Parent=gene-SO06_RS05150;Dbxref=GenBank:WP_000074609.1;Name=WP_000074609.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=SO06_RS05150;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=WP_000074609.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 325259 325451 . - . ID=gene-SO06_RS25455;Name=SO06_RS25455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25455;pseudo=true NZ_MYDG01000002.1 Protein Homology CDS 325259 325451 . - 0 ID=cds-SO06_RS25455;Parent=gene-SO06_RS25455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=SO06_RS25455;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 325370 325555 . - . ID=gene-SO06_RS25675;Name=SO06_RS25675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25675 NZ_MYDG01000002.1 Protein Homology CDS 325370 325555 . - 0 ID=cds-WP_305954967.1;Parent=gene-SO06_RS25675;Dbxref=GenBank:WP_305954967.1;Name=WP_305954967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.6;locus_tag=SO06_RS25675;product=DUF2474 domain-containing protein;protein_id=WP_305954967.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 325501 326511 . - . ID=gene-SO06_RS05160;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=SO06_RS05160 NZ_MYDG01000002.1 Protein Homology CDS 325501 326511 . - 0 ID=cds-WP_000151047.1;Parent=gene-SO06_RS05160;Dbxref=GenBank:WP_000151047.1;Name=WP_000151047.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=SO06_RS05160;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151047.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 326508 327911 . - . ID=gene-SO06_RS05165;Name=SO06_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05165 NZ_MYDG01000002.1 Protein Homology CDS 326508 327911 . - 0 ID=cds-WP_023231390.1;Parent=gene-SO06_RS05165;Dbxref=GenBank:WP_023231390.1;Name=WP_023231390.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=SO06_RS05165;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_023231390.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 328028 328129 . - . ID=gene-SO06_RS05170;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=SO06_RS05170 NZ_MYDG01000002.1 Protein Homology CDS 328028 328129 . - 0 ID=cds-WP_000934834.1;Parent=gene-SO06_RS05170;Dbxref=GenBank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=SO06_RS05170;product=small effector SsaA;protein_id=WP_000934834.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 328405 331377 . - . ID=gene-SO06_RS05175;Name=SO06_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05175 NZ_MYDG01000002.1 Protein Homology CDS 328405 331377 . - 0 ID=cds-WP_001651666.1;Parent=gene-SO06_RS05175;Dbxref=GenBank:WP_001651666.1;Name=WP_001651666.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=SO06_RS05175;product=type III restriction-modification system endonuclease;protein_id=WP_001651666.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 331387 333345 . - . ID=gene-SO06_RS05180;Name=SO06_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05180 NZ_MYDG01000002.1 Protein Homology CDS 331387 333345 . - 0 ID=cds-WP_023231389.1;Parent=gene-SO06_RS05180;Dbxref=GenBank:WP_023231389.1;Name=WP_023231389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=SO06_RS05180;product=site-specific DNA-methyltransferase;protein_id=WP_023231389.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 333534 334787 . - . ID=gene-SO06_RS05185;Name=SO06_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05185 NZ_MYDG01000002.1 Protein Homology CDS 333534 334787 . - 0 ID=cds-WP_023231388.1;Parent=gene-SO06_RS05185;Dbxref=GenBank:WP_023231388.1;Name=WP_023231388.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=SO06_RS05185;product=MFS transporter;protein_id=WP_023231388.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 335079 335273 . - . ID=gene-SO06_RS05190;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=SO06_RS05190 NZ_MYDG01000002.1 Protein Homology CDS 335079 335273 . - 0 ID=cds-WP_001159470.1;Parent=gene-SO06_RS05190;Dbxref=GenBank:WP_001159470.1;Name=WP_001159470.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=SO06_RS05190;product=gold resistance metallochaperone GolB;protein_id=WP_001159470.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 335351 335815 . - . ID=gene-SO06_RS05195;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=SO06_RS05195 NZ_MYDG01000002.1 Protein Homology CDS 335351 335815 . - 0 ID=cds-WP_001020583.1;Parent=gene-SO06_RS05195;Dbxref=GenBank:WP_001020583.1;Name=WP_001020583.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=SO06_RS05195;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020583.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 335827 338115 . - . ID=gene-SO06_RS05200;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=SO06_RS05200 NZ_MYDG01000002.1 Protein Homology CDS 335827 338115 . - 0 ID=cds-WP_023231387.1;Parent=gene-SO06_RS05200;Dbxref=GenBank:WP_023231387.1;Name=WP_023231387.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=SO06_RS05200;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_023231387.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 338392 339618 . + . ID=gene-SO06_RS05205;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=SO06_RS05205 NZ_MYDG01000002.1 Protein Homology CDS 338392 339618 . + 0 ID=cds-WP_023193432.1;Parent=gene-SO06_RS05205;Dbxref=GenBank:WP_023193432.1;Name=WP_023193432.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=SO06_RS05205;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_023193432.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 339615 342782 . + . ID=gene-SO06_RS05210;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=SO06_RS05210 NZ_MYDG01000002.1 Protein Homology CDS 339615 342782 . + 0 ID=cds-WP_000673146.1;Parent=gene-SO06_RS05210;Dbxref=GenBank:WP_000673146.1;Name=WP_000673146.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=SO06_RS05210;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WP_000673146.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 342799 344256 . + . ID=gene-SO06_RS05215;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=SO06_RS05215 NZ_MYDG01000002.1 Protein Homology CDS 342799 344256 . + 0 ID=cds-WP_001533995.1;Parent=gene-SO06_RS05215;Dbxref=GenBank:WP_001533995.1;Name=WP_001533995.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=SO06_RS05215;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WP_001533995.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 344326 344685 . - . ID=gene-SO06_RS05220;Name=SO06_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05220 NZ_MYDG01000002.1 Protein Homology CDS 344326 344685 . - 0 ID=cds-WP_000722978.1;Parent=gene-SO06_RS05220;Dbxref=GenBank:WP_000722978.1;Name=WP_000722978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=SO06_RS05220;product=DUF4156 domain-containing protein;protein_id=WP_000722978.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 344743 344967 . - . ID=gene-SO06_RS05225;Name=SO06_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05225 NZ_MYDG01000002.1 Protein Homology CDS 344743 344967 . - 0 ID=cds-WP_000737127.1;Parent=gene-SO06_RS05225;Dbxref=GenBank:WP_000737127.1;Name=WP_000737127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=SO06_RS05225;product=membrane protein;protein_id=WP_000737127.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 344978 345619 . - . ID=gene-SO06_RS05230;Name=SO06_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05230 NZ_MYDG01000002.1 Protein Homology CDS 344978 345619 . - 0 ID=cds-WP_000610827.1;Parent=gene-SO06_RS05230;Dbxref=GenBank:WP_000610827.1;Name=WP_000610827.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=SO06_RS05230;product=helix-turn-helix transcriptional regulator;protein_id=WP_000610827.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 345763 346287 . - . ID=gene-SO06_RS05235;Name=SO06_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05235 NZ_MYDG01000002.1 Protein Homology CDS 345763 346287 . - 0 ID=cds-WP_000830237.1;Parent=gene-SO06_RS05235;Dbxref=GenBank:WP_000830237.1;Name=WP_000830237.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=SO06_RS05235;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830237.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 346689 347177 . - . ID=gene-SO06_RS05240;Name=SO06_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05240 NZ_MYDG01000002.1 Protein Homology CDS 346689 347177 . - 0 ID=cds-WP_000545419.1;Parent=gene-SO06_RS05240;Dbxref=GenBank:WP_000545419.1;Name=WP_000545419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=SO06_RS05240;product=hypothetical protein;protein_id=WP_000545419.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 347150 347893 . - . ID=gene-SO06_RS05245;Name=SO06_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05245 NZ_MYDG01000002.1 Protein Homology CDS 347150 347893 . - 0 ID=cds-WP_023231385.1;Parent=gene-SO06_RS05245;Dbxref=GenBank:WP_023231385.1;Name=WP_023231385.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=SO06_RS05245;product=transcriptional regulator;protein_id=WP_023231385.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 347993 349567 . - . ID=gene-SO06_RS05250;Name=SO06_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05250 NZ_MYDG01000002.1 Protein Homology CDS 347993 349567 . - 0 ID=cds-WP_072103694.1;Parent=gene-SO06_RS05250;Dbxref=GenBank:WP_072103694.1;Name=WP_072103694.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=SO06_RS05250;product=EAL domain-containing protein;protein_id=WP_072103694.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 350069 350369 . - . ID=gene-SO06_RS05260;Name=SO06_RS05260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS05260;pseudo=true NZ_MYDG01000002.1 Protein Homology CDS 350069 350369 . - 0 ID=cds-SO06_RS05260;Parent=gene-SO06_RS05260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=SO06_RS05260;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 350342 351076 . - . ID=gene-SO06_RS05265;Name=SO06_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05265 NZ_MYDG01000002.1 Protein Homology CDS 350342 351076 . - 0 ID=cds-WP_023228271.1;Parent=gene-SO06_RS05265;Dbxref=GenBank:WP_023228271.1;Name=WP_023228271.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=SO06_RS05265;product=winged helix-turn-helix domain-containing protein;protein_id=WP_023228271.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 351740 352276 . + . ID=gene-SO06_RS05275;Name=SO06_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05275 NZ_MYDG01000002.1 Protein Homology CDS 351740 352276 . + 0 ID=cds-WP_000062033.1;Parent=gene-SO06_RS05275;Dbxref=GenBank:WP_000062033.1;Name=WP_000062033.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=SO06_RS05275;product=fimbrial protein;protein_id=WP_000062033.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 352338 353099 . + . ID=gene-SO06_RS05280;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=SO06_RS05280 NZ_MYDG01000002.1 Protein Homology CDS 352338 353099 . + 0 ID=cds-WP_000781485.1;Parent=gene-SO06_RS05280;Dbxref=GenBank:WP_000781485.1;Name=WP_000781485.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=SO06_RS05280;product=fimbrial biogenesis chaperone StbB;protein_id=WP_000781485.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 353083 355656 . + . ID=gene-SO06_RS05285;Name=SO06_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05285 NZ_MYDG01000002.1 Protein Homology CDS 353083 355656 . + 0 ID=cds-WP_023231383.1;Parent=gene-SO06_RS05285;Dbxref=GenBank:WP_023231383.1;Name=WP_023231383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=SO06_RS05285;product=fimbrial outer membrane usher protein;protein_id=WP_023231383.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 355661 356986 . + . ID=gene-SO06_RS05290;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=SO06_RS05290 NZ_MYDG01000002.1 Protein Homology CDS 355661 356986 . + 0 ID=cds-WP_023221527.1;Parent=gene-SO06_RS05290;Dbxref=GenBank:WP_023221527.1;Name=WP_023221527.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=SO06_RS05290;product=fimbrial usher protein StbD;protein_id=WP_023221527.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 356952 357710 . + . ID=gene-SO06_RS05295;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=SO06_RS05295 NZ_MYDG01000002.1 Protein Homology CDS 356952 357710 . + 0 ID=cds-WP_023231382.1;Parent=gene-SO06_RS05295;Dbxref=GenBank:WP_023231382.1;Name=WP_023231382.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=SO06_RS05295;product=fimbrial biogenesis chaperone StbE;protein_id=WP_023231382.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 357758 358156 . - . ID=gene-SO06_RS05300;Name=SO06_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05300 NZ_MYDG01000002.1 Protein Homology CDS 357758 358156 . - 0 ID=cds-WP_023231381.1;Parent=gene-SO06_RS05300;Dbxref=GenBank:WP_023231381.1;Name=WP_023231381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=SO06_RS05300;product=hypothetical protein;protein_id=WP_023231381.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 358848 359120 . + . ID=gene-SO06_RS05305;Name=SO06_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05305 NZ_MYDG01000002.1 Protein Homology CDS 358848 359120 . + 0 ID=cds-WP_023231380.1;Parent=gene-SO06_RS05305;Dbxref=GenBank:WP_023231380.1;Name=WP_023231380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=SO06_RS05305;product=hypothetical protein;protein_id=WP_023231380.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 359065 360030 . - . ID=gene-SO06_RS05310;Name=SO06_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05310 NZ_MYDG01000002.1 Protein Homology CDS 359065 360030 . - 0 ID=cds-WP_023231379.1;Parent=gene-SO06_RS05310;Dbxref=GenBank:WP_023231379.1;Name=WP_023231379.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=SO06_RS05310;product=LysR family transcriptional regulator;protein_id=WP_023231379.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 360064 360978 . - . ID=gene-SO06_RS05315;Name=SO06_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05315 NZ_MYDG01000002.1 Protein Homology CDS 360064 360978 . - 0 ID=cds-WP_000105592.1;Parent=gene-SO06_RS05315;Dbxref=GenBank:WP_000105592.1;Name=WP_000105592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=SO06_RS05315;product=alpha/beta fold hydrolase;protein_id=WP_000105592.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 360978 361856 . - . ID=gene-SO06_RS05320;Name=SO06_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05320 NZ_MYDG01000002.1 Protein Homology CDS 360978 361856 . - 0 ID=cds-WP_000780212.1;Parent=gene-SO06_RS05320;Dbxref=GenBank:WP_000780212.1;Name=WP_000780212.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=SO06_RS05320;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000780212.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 361871 362497 . - . ID=gene-SO06_RS05325;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=SO06_RS05325 NZ_MYDG01000002.1 Protein Homology CDS 361871 362497 . - 0 ID=cds-WP_000379342.1;Parent=gene-SO06_RS05325;Dbxref=GenBank:WP_000379342.1;Name=WP_000379342.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=SO06_RS05325;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000379342.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 362499 363920 . - . ID=gene-SO06_RS05330;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=SO06_RS05330 NZ_MYDG01000002.1 Protein Homology CDS 362499 363920 . - 0 ID=cds-WP_001274854.1;Parent=gene-SO06_RS05330;Dbxref=GenBank:WP_001274854.1;Name=WP_001274854.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=SO06_RS05330;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001274854.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 364052 365290 . - . ID=gene-SO06_RS05335;Name=SO06_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05335 NZ_MYDG01000002.1 Protein Homology CDS 364052 365290 . - 0 ID=cds-WP_077248364.1;Parent=gene-SO06_RS05335;Dbxref=GenBank:WP_077248364.1;Name=WP_077248364.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=SO06_RS05335;product=MFS transporter;protein_id=WP_077248364.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 365632 365955 . - . ID=gene-SO06_RS05340;Name=SO06_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05340 NZ_MYDG01000002.1 Protein Homology CDS 365632 365955 . - 0 ID=cds-WP_001573898.1;Parent=gene-SO06_RS05340;Dbxref=GenBank:WP_001573898.1;Name=WP_001573898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=SO06_RS05340;product=DUF1889 family protein;protein_id=WP_001573898.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 366065 366193 . - . ID=gene-SO06_RS05345;Name=SO06_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05345 NZ_MYDG01000002.1 Protein Homology CDS 366065 366193 . - 0 ID=cds-WP_077221214.1;Parent=gene-SO06_RS05345;Dbxref=GenBank:WP_077221214.1;Name=WP_077221214.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020417.6;locus_tag=SO06_RS05345;product=diol dehydratase reactivase ATPase-like domain-containing protein;protein_id=WP_077221214.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 366141 366353 . - . ID=gene-SO06_RS05350;Name=SO06_RS05350;end_range=366353,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS05350;partial=true;pseudo=true;start_range=.,366141 NZ_MYDG01000002.1 Protein Homology CDS 366141 366353 . - 0 ID=cds-SO06_RS05350;Parent=gene-SO06_RS05350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=366353,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=SO06_RS05350;partial=true;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;start_range=.,366141;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 366355 367135 . + . ID=gene-SO06_RS05355;Name=SO06_RS05355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS05355;partial=true;pseudo=true;start_range=.,366355 NZ_MYDG01000002.1 Protein Homology CDS 366355 367135 . + 0 ID=cds-SO06_RS05355;Parent=gene-SO06_RS05355;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=SO06_RS05355;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,366355;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 367153 367407 . - . ID=gene-SO06_RS05360;Name=SO06_RS05360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS05360;partial=true;pseudo=true;start_range=.,367153 NZ_MYDG01000002.1 Protein Homology CDS 367153 367407 . - 0 ID=cds-SO06_RS05360;Parent=gene-SO06_RS05360;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=SO06_RS05360;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,367153;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 367739 368114 . - . ID=gene-SO06_RS25460;Name=SO06_RS25460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25460;pseudo=true NZ_MYDG01000002.1 Protein Homology CDS 367739 368114 . - 0 ID=cds-SO06_RS25460;Parent=gene-SO06_RS25460;Note=frameshifted%3B internal stop;Ontology_term=GO:0042276;gbkey=CDS;go_process=error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572904.1;locus_tag=SO06_RS25460;product=HumD family translesion DNA polymerase;pseudo=true;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 368228 368503 . + . ID=gene-SO06_RS24940;Name=SO06_RS24940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24940 NZ_MYDG01000002.1 GeneMarkS-2+ CDS 368228 368503 . + 0 ID=cds-WP_137989726.1;Parent=gene-SO06_RS24940;Dbxref=GenBank:WP_137989726.1;Name=WP_137989726.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS24940;product=GtrA family protein;protein_id=WP_137989726.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 368575 370497 . + . ID=gene-SO06_RS05375;Name=SO06_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05375 NZ_MYDG01000002.1 Protein Homology CDS 368575 370497 . + 0 ID=cds-WP_023241470.1;Parent=gene-SO06_RS05375;Dbxref=GenBank:WP_023241470.1;Name=WP_023241470.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400614.1;locus_tag=SO06_RS05375;product=acyltransferase family protein;protein_id=WP_023241470.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 370537 372522 . - . ID=gene-SO06_RS05380;Name=SO06_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05380 NZ_MYDG01000002.1 Protein Homology CDS 370537 372522 . - 0 ID=cds-WP_080204163.1;Parent=gene-SO06_RS05380;Dbxref=GenBank:WP_080204163.1;Name=WP_080204163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016048838.1;locus_tag=SO06_RS05380;product=tail spike protein;protein_id=WP_080204163.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 372678 374675 . - . ID=gene-SO06_RS05385;Name=SO06_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05385 NZ_MYDG01000002.1 Protein Homology CDS 372678 374675 . - 0 ID=cds-WP_080204164.1;Parent=gene-SO06_RS05385;Dbxref=GenBank:WP_080204164.1;Name=WP_080204164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001605580.1;locus_tag=SO06_RS05385;product=DNA transfer protein;protein_id=WP_080204164.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 374675 376030 . - . ID=gene-SO06_RS05390;Name=SO06_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05390 NZ_MYDG01000002.1 Protein Homology CDS 374675 376030 . - 0 ID=cds-WP_176208148.1;Parent=gene-SO06_RS05390;Dbxref=GenBank:WP_176208148.1;Name=WP_176208148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000246948.1;locus_tag=SO06_RS05390;product=phage DNA ejection protein;protein_id=WP_176208148.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 376040 376729 . - . ID=gene-SO06_RS05395;Name=SO06_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05395 NZ_MYDG01000002.1 Protein Homology CDS 376040 376729 . - 0 ID=cds-WP_023135926.1;Parent=gene-SO06_RS05395;Dbxref=GenBank:WP_023135926.1;Name=WP_023135926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539209.1;locus_tag=SO06_RS05395;product=hypothetical protein;protein_id=WP_023135926.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 376732 377187 . - . ID=gene-SO06_RS05400;Name=SO06_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05400 NZ_MYDG01000002.1 Protein Homology CDS 376732 377187 . - 0 ID=cds-WP_023241417.1;Parent=gene-SO06_RS05400;Dbxref=GenBank:WP_023241417.1;Name=WP_023241417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706178.2;locus_tag=SO06_RS05400;product=DUF2824 family protein;protein_id=WP_023241417.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 377187 377888 . - . ID=gene-SO06_RS05405;Name=SO06_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05405 NZ_MYDG01000002.1 Protein Homology CDS 377187 377888 . - 0 ID=cds-WP_023135928.1;Parent=gene-SO06_RS05405;Dbxref=GenBank:WP_023135928.1;Name=WP_023135928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774926.1;locus_tag=SO06_RS05405;product=hypothetical protein;protein_id=WP_023135928.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 377892 379310 . - . ID=gene-SO06_RS05410;Name=SO06_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05410 NZ_MYDG01000002.1 Protein Homology CDS 377892 379310 . - 0 ID=cds-WP_023135929.1;Parent=gene-SO06_RS05410;Dbxref=GenBank:WP_023135929.1;Name=WP_023135929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706176.1;locus_tag=SO06_RS05410;product=packaged DNA stabilization protein gp10;protein_id=WP_023135929.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 379270 379770 . - . ID=gene-SO06_RS05415;Name=SO06_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05415 NZ_MYDG01000002.1 Protein Homology CDS 379270 379770 . - 0 ID=cds-WP_001166103.1;Parent=gene-SO06_RS05415;Dbxref=GenBank:WP_001166103.1;Name=WP_001166103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015975196.1;locus_tag=SO06_RS05415;product=packaged DNA stabilization gp4 family protein;protein_id=WP_001166103.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 379754 380314 . - . ID=gene-SO06_RS05420;Name=SO06_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05420 NZ_MYDG01000002.1 Protein Homology CDS 379754 380314 . - 0 ID=cds-WP_000538670.1;Parent=gene-SO06_RS05420;Dbxref=GenBank:WP_000538670.1;Name=WP_000538670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000538670.1;locus_tag=SO06_RS05420;product=WDGH domain-containing protein;protein_id=WP_000538670.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 380355 381647 . - . ID=gene-SO06_RS05425;Name=SO06_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05425 NZ_MYDG01000002.1 Protein Homology CDS 380355 381647 . - 0 ID=cds-WP_080204165.1;Parent=gene-SO06_RS05425;Dbxref=GenBank:WP_080204165.1;Name=WP_080204165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015995280.1;locus_tag=SO06_RS05425;product=P22 phage major capsid protein family protein;protein_id=WP_080204165.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 381647 382558 . - . ID=gene-SO06_RS05430;Name=SO06_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05430 NZ_MYDG01000002.1 Protein Homology CDS 381647 382558 . - 0 ID=cds-WP_080204166.1;Parent=gene-SO06_RS05430;Dbxref=GenBank:WP_080204166.1;Name=WP_080204166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706172.1;locus_tag=SO06_RS05430;product=scaffolding protein;protein_id=WP_080204166.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 382572 384749 . - . ID=gene-SO06_RS05435;Name=SO06_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05435 NZ_MYDG01000002.1 Protein Homology CDS 382572 384749 . - 0 ID=cds-WP_080204167.1;Parent=gene-SO06_RS05435;Dbxref=GenBank:WP_080204167.1;Name=WP_080204167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441432.1;locus_tag=SO06_RS05435;product=portal protein;protein_id=WP_080204167.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 384798 385298 . + . ID=gene-SO06_RS05440;Name=SO06_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05440 NZ_MYDG01000002.1 Protein Homology CDS 384798 385298 . + 0 ID=cds-WP_000736482.1;Parent=gene-SO06_RS05440;Dbxref=GenBank:WP_000736482.1;Name=WP_000736482.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF024784.6;locus_tag=SO06_RS05440;product=HNH endonuclease signature motif containing protein;protein_id=WP_000736482.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 385302 386762 . - . ID=gene-SO06_RS05445;Name=SO06_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05445 NZ_MYDG01000002.1 Protein Homology CDS 385302 386762 . - 0 ID=cds-WP_023217188.1;Parent=gene-SO06_RS05445;Dbxref=GenBank:WP_023217188.1;Name=WP_023217188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749919.1;locus_tag=SO06_RS05445;product=hypothetical protein;protein_id=WP_023217188.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 386762 387220 . - . ID=gene-SO06_RS05450;Name=SO06_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05450 NZ_MYDG01000002.1 Protein Homology CDS 386762 387220 . - 0 ID=cds-WP_001629224.1;Parent=gene-SO06_RS05450;Dbxref=GenBank:WP_001629224.1;Name=WP_001629224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750256.1;locus_tag=SO06_RS05450;product=hypothetical protein;protein_id=WP_001629224.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 387233 387637 . - . ID=gene-SO06_RS05455;Name=SO06_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05455 NZ_MYDG01000002.1 Protein Homology CDS 387233 387637 . - 0 ID=cds-WP_080204168.1;Parent=gene-SO06_RS05455;Dbxref=GenBank:WP_080204168.1;Name=WP_080204168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441430.1;locus_tag=SO06_RS05455;product=Decoration protein;protein_id=WP_080204168.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 387640 387882 . - . ID=gene-SO06_RS05460;Name=SO06_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05460 NZ_MYDG01000002.1 Protein Homology CDS 387640 387882 . - 0 ID=cds-WP_000807793.1;Parent=gene-SO06_RS05460;Dbxref=GenBank:WP_000807793.1;Name=WP_000807793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001561773.1;locus_tag=SO06_RS05460;product=DUF2560 family protein;protein_id=WP_000807793.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 388185 388871 . - . ID=gene-SO06_RS05465;Name=SO06_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05465 NZ_MYDG01000002.1 Protein Homology CDS 388185 388871 . - 0 ID=cds-WP_001177703.1;Parent=gene-SO06_RS05465;Dbxref=GenBank:WP_001177703.1;Name=WP_001177703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535513.1;locus_tag=SO06_RS05465;product=Rha family transcriptional regulator;protein_id=WP_001177703.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 389084 389521 . - . ID=gene-SO06_RS05475;Name=SO06_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05475 NZ_MYDG01000002.1 Protein Homology CDS 389084 389521 . - 0 ID=cds-WP_001531485.1;Parent=gene-SO06_RS05475;Dbxref=GenBank:WP_001531485.1;Name=WP_001531485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009453323.1;locus_tag=SO06_RS05475;product=lysis protein;protein_id=WP_001531485.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 389610 390107 . - . ID=gene-SO06_RS05480;Name=SO06_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05480 NZ_MYDG01000002.1 Protein Homology CDS 389610 390107 . - 0 ID=cds-WP_000074137.1;Parent=gene-SO06_RS05480;Dbxref=GenBank:WP_000074137.1;Name=WP_000074137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415087.1;locus_tag=SO06_RS05480;product=lysozyme;protein_id=WP_000074137.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 390085 390288 . - . ID=gene-SO06_RS05485;Name=SO06_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05485 NZ_MYDG01000002.1 Protein Homology CDS 390085 390288 . - 0 ID=cds-WP_000286100.1;Parent=gene-SO06_RS05485;Dbxref=GenBank:WP_000286100.1;Name=WP_000286100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000286100.1;locus_tag=SO06_RS05485;product=phage holin family protein;protein_id=WP_000286100.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 390727 391350 . - . ID=gene-SO06_RS05495;Name=SO06_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05495 NZ_MYDG01000002.1 Protein Homology CDS 390727 391350 . - 0 ID=cds-WP_001235453.1;Parent=gene-SO06_RS05495;Dbxref=GenBank:WP_001235453.1;Name=WP_001235453.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311528.1;locus_tag=SO06_RS05495;product=antitermination protein;protein_id=WP_001235453.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 391347 391526 . - . ID=gene-SO06_RS05500;Name=SO06_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05500 NZ_MYDG01000002.1 Protein Homology CDS 391347 391526 . - 0 ID=cds-WP_000219131.1;Parent=gene-SO06_RS05500;Dbxref=GenBank:WP_000219131.1;Name=WP_000219131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016048830.1;locus_tag=SO06_RS05500;product=hypothetical protein;protein_id=WP_000219131.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 391507 391710 . - . ID=gene-SO06_RS05505;Name=SO06_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05505 NZ_MYDG01000002.1 Protein Homology CDS 391507 391710 . - 0 ID=cds-WP_000149925.1;Parent=gene-SO06_RS05505;Dbxref=GenBank:WP_000149925.1;Name=WP_000149925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149880.1;locus_tag=SO06_RS05505;product=phage NinH family protein;protein_id=WP_000149925.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 391707 391931 . - . ID=gene-SO06_RS05510;Name=SO06_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05510 NZ_MYDG01000002.1 Protein Homology CDS 391707 391931 . - 0 ID=cds-WP_000036317.1;Parent=gene-SO06_RS05510;Dbxref=GenBank:WP_000036317.1;Name=WP_000036317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748048.1;locus_tag=SO06_RS05510;product=hypothetical protein;protein_id=WP_000036317.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 391928 392539 . - . ID=gene-SO06_RS05515;Name=SO06_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05515 NZ_MYDG01000002.1 Protein Homology CDS 391928 392539 . - 0 ID=cds-WP_001129733.1;Parent=gene-SO06_RS05515;Dbxref=GenBank:WP_001129733.1;Name=WP_001129733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001597929.1;locus_tag=SO06_RS05515;product=recombination protein NinG;protein_id=WP_001129733.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 392532 392708 . - . ID=gene-SO06_RS05520;Name=SO06_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05520 NZ_MYDG01000002.1 Protein Homology CDS 392532 392708 . - 0 ID=cds-WP_000950959.1;Parent=gene-SO06_RS05520;Dbxref=GenBank:WP_000950959.1;Name=WP_000950959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950944.1;locus_tag=SO06_RS05520;product=protein NinF;protein_id=WP_000950959.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 392701 393033 . - . ID=gene-SO06_RS05525;Name=SO06_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05525 NZ_MYDG01000002.1 Protein Homology CDS 392701 393033 . - 0 ID=cds-WP_001531428.1;Parent=gene-SO06_RS05525;Dbxref=GenBank:WP_001531428.1;Name=WP_001531428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531428.1;locus_tag=SO06_RS05525;product=DUF2591 domain-containing protein;protein_id=WP_001531428.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 393036 393212 . - . ID=gene-SO06_RS05530;Name=SO06_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05530 NZ_MYDG01000002.1 Protein Homology CDS 393036 393212 . - 0 ID=cds-WP_000113772.1;Parent=gene-SO06_RS05530;Dbxref=GenBank:WP_000113772.1;Name=WP_000113772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311007.1;locus_tag=SO06_RS05530;product=NinE family protein;protein_id=WP_000113772.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 393179 393352 . - . ID=gene-SO06_RS05535;Name=ninD;gbkey=Gene;gene=ninD;gene_biotype=protein_coding;locus_tag=SO06_RS05535 NZ_MYDG01000002.1 Protein Homology CDS 393179 393352 . - 0 ID=cds-WP_000679702.1;Parent=gene-SO06_RS05535;Dbxref=GenBank:WP_000679702.1;Name=WP_000679702.1;gbkey=CDS;gene=ninD;inference=COORDINATES: protein motif:HMM:NF036649.6;locus_tag=SO06_RS05535;product=protein NinD;protein_id=WP_000679702.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 393349 393774 . - . ID=gene-SO06_RS05540;Name=SO06_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05540 NZ_MYDG01000002.1 Protein Homology CDS 393349 393774 . - 0 ID=cds-WP_080204169.1;Parent=gene-SO06_RS05540;Dbxref=GenBank:WP_080204169.1;Name=WP_080204169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441425.1;locus_tag=SO06_RS05540;product=recombination protein NinB;protein_id=WP_080204169.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 393776 394270 . - . ID=gene-SO06_RS05545;Name=SO06_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05545 NZ_MYDG01000002.1 Protein Homology CDS 393776 394270 . - 0 ID=cds-WP_024193984.1;Parent=gene-SO06_RS05545;Dbxref=GenBank:WP_024193984.1;Name=WP_024193984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441424.1;locus_tag=SO06_RS05545;product=HNH endonuclease;protein_id=WP_024193984.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 394247 394363 . - . ID=gene-SO06_RS25760;Name=SO06_RS25760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25760;partial=true;pseudo=true;start_range=.,394247 NZ_MYDG01000002.1 Protein Homology CDS 394247 394363 . - 0 ID=cds-SO06_RS25760;Parent=gene-SO06_RS25760;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001513013.1;locus_tag=SO06_RS25760;partial=true;product=HNH endonuclease;pseudo=true;start_range=.,394247;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 394437 395813 . - . ID=gene-SO06_RS05550;Name=SO06_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05550 NZ_MYDG01000002.1 Protein Homology CDS 394437 395813 . - 0 ID=cds-WP_080204170.1;Parent=gene-SO06_RS05550;Dbxref=GenBank:WP_080204170.1;Name=WP_080204170.1;Ontology_term=GO:0006269,GO:0003677,GO:0003678,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248398.1;locus_tag=SO06_RS05550;product=replicative DNA helicase;protein_id=WP_080204170.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 395810 396697 . - . ID=gene-SO06_RS05555;Name=SO06_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05555 NZ_MYDG01000002.1 Protein Homology CDS 395810 396697 . - 0 ID=cds-WP_069722714.1;Parent=gene-SO06_RS05555;Dbxref=GenBank:WP_069722714.1;Name=WP_069722714.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640796.1;locus_tag=SO06_RS05555;product=replication protein;protein_id=WP_069722714.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 396760 397032 . - . ID=gene-SO06_RS05560;Name=SO06_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05560 NZ_MYDG01000002.1 Protein Homology CDS 396760 397032 . - 0 ID=cds-WP_001244621.1;Parent=gene-SO06_RS05560;Dbxref=GenBank:WP_001244621.1;Name=WP_001244621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244752.1;locus_tag=SO06_RS05560;product=hypothetical protein;protein_id=WP_001244621.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 397055 397351 . - . ID=gene-SO06_RS05565;Name=SO06_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05565 NZ_MYDG01000002.1 Protein Homology CDS 397055 397351 . - 0 ID=cds-WP_000438533.1;Parent=gene-SO06_RS05565;Dbxref=GenBank:WP_000438533.1;Name=WP_000438533.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309214.1;locus_tag=SO06_RS05565;product=CII family transcriptional regulator;protein_id=WP_000438533.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 397461 397676 . - . ID=gene-SO06_RS05570;Name=SO06_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05570 NZ_MYDG01000002.1 Protein Homology CDS 397461 397676 . - 0 ID=cds-WP_000067727.1;Parent=gene-SO06_RS05570;Dbxref=GenBank:WP_000067727.1;Name=WP_000067727.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309213.1;locus_tag=SO06_RS05570;product=helix-turn-helix transcriptional regulator;protein_id=WP_000067727.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 397788 398447 . + . ID=gene-SO06_RS05575;Name=SO06_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05575 NZ_MYDG01000002.1 Protein Homology CDS 397788 398447 . + 0 ID=cds-WP_179077806.1;Parent=gene-SO06_RS05575;Dbxref=GenBank:WP_179077806.1;Name=WP_179077806.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014532159.1;locus_tag=SO06_RS05575;product=LexA family protein;protein_id=WP_179077806.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 398834 399136 . + . ID=gene-SO06_RS05585;Name=SO06_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05585 NZ_MYDG01000002.1 Protein Homology CDS 398834 399136 . + 0 ID=cds-WP_000216175.1;Parent=gene-SO06_RS05585;Dbxref=GenBank:WP_000216175.1;Name=WP_000216175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216178.1;locus_tag=SO06_RS05585;product=hypothetical protein;protein_id=WP_000216175.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 399157 399735 . - . ID=gene-SO06_RS05590;Name=SO06_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05590 NZ_MYDG01000002.1 Protein Homology CDS 399157 399735 . - 0 ID=cds-WP_001682202.1;Parent=gene-SO06_RS05590;Dbxref=GenBank:WP_001682202.1;Name=WP_001682202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682202.1;locus_tag=SO06_RS05590;product=superinfection exclusion B family protein;protein_id=WP_001682202.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 399950 400144 . + . ID=gene-SO06_RS05595;Name=SO06_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05595 NZ_MYDG01000002.1 Protein Homology CDS 399950 400144 . + 0 ID=cds-WP_000213983.1;Parent=gene-SO06_RS05595;Dbxref=GenBank:WP_000213983.1;Name=WP_000213983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213983.1;locus_tag=SO06_RS05595;product=antirestriction Ral family protein;protein_id=WP_000213983.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 400181 400417 . + . ID=gene-SO06_RS05600;Name=SO06_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05600 NZ_MYDG01000002.1 Protein Homology CDS 400181 400417 . + 0 ID=cds-WP_000651935.1;Parent=gene-SO06_RS05600;Dbxref=GenBank:WP_000651935.1;Name=WP_000651935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651935.1;locus_tag=SO06_RS05600;product=hypothetical protein;protein_id=WP_000651935.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 400417 400620 . + . ID=gene-SO06_RS05605;Name=SO06_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05605 NZ_MYDG01000002.1 Protein Homology CDS 400417 400620 . + 0 ID=cds-WP_001737461.1;Parent=gene-SO06_RS05605;Dbxref=GenBank:WP_001737461.1;Name=WP_001737461.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016343.6;locus_tag=SO06_RS05605;product=DUF551 domain-containing protein;protein_id=WP_001737461.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 400768 401079 . + . ID=gene-SO06_RS05610;Name=SO06_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05610 NZ_MYDG01000002.1 Protein Homology CDS 400768 401079 . + 0 ID=cds-WP_000776964.1;Parent=gene-SO06_RS05610;Dbxref=GenBank:WP_000776964.1;Name=WP_000776964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000776959.1;locus_tag=SO06_RS05610;product=superinfection exclusion protein;protein_id=WP_000776964.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 401165 401323 . + . ID=gene-SO06_RS05615;Name=SO06_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05615 NZ_MYDG01000002.1 Protein Homology CDS 401165 401323 . + 0 ID=cds-WP_000582314.1;Parent=gene-SO06_RS05615;Dbxref=GenBank:WP_000582314.1;Name=WP_000582314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582314.1;locus_tag=SO06_RS05615;product=protease FtsH-inhibitory lysogeny factor CIII;protein_id=WP_000582314.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 401304 401492 . + . ID=gene-SO06_RS05620;Name=SO06_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05620 NZ_MYDG01000002.1 Protein Homology CDS 401304 401492 . + 0 ID=cds-WP_000158027.1;Parent=gene-SO06_RS05620;Dbxref=GenBank:WP_000158027.1;Name=WP_000158027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749553.1;locus_tag=SO06_RS05620;product=DUF5444 family protein;protein_id=WP_000158027.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 401482 401625 . + . ID=gene-SO06_RS25250;Name=SO06_RS25250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25250 NZ_MYDG01000002.1 Protein Homology CDS 401482 401625 . + 0 ID=cds-WP_001163402.1;Parent=gene-SO06_RS25250;Dbxref=GenBank:WP_001163402.1;Name=WP_001163402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000902093.1;locus_tag=SO06_RS25250;product=hypothetical protein;protein_id=WP_001163402.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 401622 402239 . + . ID=gene-SO06_RS05625;Name=SO06_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05625 NZ_MYDG01000002.1 Protein Homology CDS 401622 402239 . + 0 ID=cds-WP_000031375.1;Parent=gene-SO06_RS05625;Dbxref=GenBank:WP_000031375.1;Name=WP_000031375.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000031375.1;locus_tag=SO06_RS05625;product=ERF family protein;protein_id=WP_000031375.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 402570 402863 . + . ID=gene-SO06_RS05635;Name=SO06_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05635 NZ_MYDG01000002.1 Protein Homology CDS 402570 402863 . + 0 ID=cds-WP_015975204.1;Parent=gene-SO06_RS05635;Dbxref=GenBank:WP_015975204.1;Name=WP_015975204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001111277.1;locus_tag=SO06_RS05635;product=phage anti-RecBCD protein;protein_id=WP_015975204.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 402874 403044 . + . ID=gene-SO06_RS05640;Name=SO06_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05640 NZ_MYDG01000002.1 Protein Homology CDS 402874 403044 . + 0 ID=cds-WP_001214434.1;Parent=gene-SO06_RS05640;Dbxref=GenBank:WP_001214434.1;Name=WP_001214434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001552366.1;locus_tag=SO06_RS05640;product=DUF2737 family protein;protein_id=WP_001214434.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 403032 403529 . + . ID=gene-SO06_RS05645;Name=SO06_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05645 NZ_MYDG01000002.1 Protein Homology CDS 403032 403529 . + 0 ID=cds-WP_015975203.1;Parent=gene-SO06_RS05645;Dbxref=GenBank:WP_015975203.1;Name=WP_015975203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000665849.1;locus_tag=SO06_RS05645;product=hypothetical protein;protein_id=WP_015975203.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 403638 403997 . + . ID=gene-SO06_RS05650;Name=SO06_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05650 NZ_MYDG01000002.1 Protein Homology CDS 403638 403997 . + 0 ID=cds-WP_015975202.1;Parent=gene-SO06_RS05650;Dbxref=GenBank:WP_015975202.1;Name=WP_015975202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065086.1;locus_tag=SO06_RS05650;product=DUF5448 family protein;protein_id=WP_015975202.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 404039 404587 . + . ID=gene-SO06_RS05655;Name=SO06_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05655 NZ_MYDG01000002.1 Protein Homology CDS 404039 404587 . + 0 ID=cds-WP_310794685.1;Parent=gene-SO06_RS05655;Dbxref=GenBank:WP_310794685.1;Name=WP_310794685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006786555.1;locus_tag=SO06_RS05655;product=ead/Ea22-like family protein;protein_id=WP_310794685.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 404590 404778 . + . ID=gene-SO06_RS05660;Name=SO06_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05660 NZ_MYDG01000002.1 Protein Homology CDS 404590 404778 . + 0 ID=cds-WP_024152293.1;Parent=gene-SO06_RS05660;Dbxref=GenBank:WP_024152293.1;Name=WP_024152293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664306.1;locus_tag=SO06_RS05660;product=hypothetical protein;protein_id=WP_024152293.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 404782 405735 . + . ID=gene-SO06_RS05665;Name=SO06_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05665 NZ_MYDG01000002.1 Protein Homology CDS 404782 405735 . + 0 ID=cds-WP_000208022.1;Parent=gene-SO06_RS05665;Dbxref=GenBank:WP_000208022.1;Name=WP_000208022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208022.1;locus_tag=SO06_RS05665;product=dATP/dGTP pyrophosphohydrolase domain-containing protein;protein_id=WP_000208022.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 405832 406011 . + . ID=gene-SO06_RS05670;Name=SO06_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05670 NZ_MYDG01000002.1 Protein Homology CDS 405832 406011 . + 0 ID=cds-WP_001277764.1;Parent=gene-SO06_RS05670;Dbxref=GenBank:WP_001277764.1;Name=WP_001277764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277760.1;locus_tag=SO06_RS05670;product=Eag protein;protein_id=WP_001277764.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 406112 406747 . + . ID=gene-SO06_RS05675;Name=SO06_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05675 NZ_MYDG01000002.1 Protein Homology CDS 406112 406747 . + 0 ID=cds-WP_000016640.1;Parent=gene-SO06_RS05675;Dbxref=GenBank:WP_000016640.1;Name=WP_000016640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000016640.1;locus_tag=SO06_RS05675;product=hypothetical protein;protein_id=WP_000016640.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 406750 407100 . + . ID=gene-SO06_RS05680;Name=SO06_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05680 NZ_MYDG01000002.1 Protein Homology CDS 406750 407100 . + 0 ID=cds-WP_000443634.1;Parent=gene-SO06_RS05680;Dbxref=GenBank:WP_000443634.1;Name=WP_000443634.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000443634.1;locus_tag=SO06_RS05680;product=helix-turn-helix domain-containing protein;protein_id=WP_000443634.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 407022 408140 . + . ID=gene-SO06_RS05685;Name=SO06_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05685 NZ_MYDG01000002.1 Protein Homology CDS 407022 408140 . + 0 ID=cds-WP_001132560.1;Parent=gene-SO06_RS05685;Dbxref=GenBank:WP_001132560.1;Name=WP_001132560.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835868.1;locus_tag=SO06_RS05685;product=site-specific integrase;protein_id=WP_001132560.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 408155 408230 . - . ID=gene-SO06_RS05690;Name=SO06_RS05690;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS05690 NZ_MYDG01000002.1 tRNAscan-SE tRNA 408155 408230 . - . ID=rna-SO06_RS05690;Parent=gene-SO06_RS05690;anticodon=(pos:complement(408195..408197));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS05690;product=tRNA-Thr NZ_MYDG01000002.1 tRNAscan-SE exon 408155 408230 . - . ID=exon-SO06_RS05690-1;Parent=rna-SO06_RS05690;anticodon=(pos:complement(408195..408197));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS05690;product=tRNA-Thr NZ_MYDG01000002.1 RefSeq gene 408346 409596 . - . ID=gene-SO06_RS05695;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=SO06_RS05695 NZ_MYDG01000002.1 Protein Homology CDS 408346 409596 . - 0 ID=cds-WP_023231375.1;Parent=gene-SO06_RS05695;Dbxref=GenBank:WP_023231375.1;Name=WP_023231375.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=SO06_RS05695;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_023231375.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 409608 410711 . - . ID=gene-SO06_RS05700;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=SO06_RS05700 NZ_MYDG01000002.1 Protein Homology CDS 409608 410711 . - 0 ID=cds-WP_001285275.1;Parent=gene-SO06_RS05700;Dbxref=GenBank:WP_001285275.1;Name=WP_001285275.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=SO06_RS05700;product=glutamate 5-kinase;protein_id=WP_001285275.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 410994 412046 . + . ID=gene-SO06_RS05705;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=SO06_RS05705 NZ_MYDG01000002.1 Protein Homology CDS 410994 412046 . + 0 ID=cds-WP_001043672.1;Parent=gene-SO06_RS05705;Dbxref=GenBank:WP_001043672.1;Name=WP_001043672.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=SO06_RS05705;product=phosphoporin PhoE;protein_id=WP_001043672.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 412097 412498 . - . ID=gene-SO06_RS05710;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=SO06_RS05710 NZ_MYDG01000002.1 Protein Homology CDS 412097 412498 . - 0 ID=cds-WP_000174693.1;Parent=gene-SO06_RS05710;Dbxref=GenBank:WP_000174693.1;Name=WP_000174693.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=SO06_RS05710;product=sigma factor-binding protein Crl;protein_id=WP_000174693.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 412556 413800 . - . ID=gene-SO06_RS05715;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=SO06_RS05715 NZ_MYDG01000002.1 Protein Homology CDS 412556 413800 . - 0 ID=cds-WP_023231374.1;Parent=gene-SO06_RS05715;Dbxref=GenBank:WP_023231374.1;Name=WP_023231374.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=SO06_RS05715;product=esterase FrsA;protein_id=WP_023231374.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 413889 414347 . - . ID=gene-SO06_RS05720;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=SO06_RS05720 NZ_MYDG01000002.1 Protein Homology CDS 413889 414347 . - 0 ID=cds-WP_001292018.1;Parent=gene-SO06_RS05720;Dbxref=GenBank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=SO06_RS05720;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 414596 416053 . + . ID=gene-SO06_RS05725;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=SO06_RS05725 NZ_MYDG01000002.1 Protein Homology CDS 414596 416053 . + 0 ID=cds-WP_001292977.1;Parent=gene-SO06_RS05725;Dbxref=GenBank:WP_001292977.1;Name=WP_001292977.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=SO06_RS05725;product=cytosol nonspecific dipeptidase;protein_id=WP_001292977.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 416125 416670 . + . ID=gene-SO06_RS05730;Name=SO06_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05730 NZ_MYDG01000002.1 GeneMarkS-2+ CDS 416125 416670 . + 0 ID=cds-WP_023231373.1;Parent=gene-SO06_RS05730;Dbxref=GenBank:WP_023231373.1;Name=WP_023231373.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS05730;product=hypothetical protein;protein_id=WP_023231373.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 416728 417342 . - . ID=gene-SO06_RS05735;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=SO06_RS05735 NZ_MYDG01000002.1 Protein Homology CDS 416728 417342 . - 0 ID=cds-WP_023231372.1;Parent=gene-SO06_RS05735;Dbxref=GenBank:WP_023231372.1;Name=WP_023231372.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=SO06_RS05735;product=peptide chain release factor H;protein_id=WP_023231372.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 417339 418478 . - . ID=gene-SO06_RS05740;Name=SO06_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05740 NZ_MYDG01000002.1 Protein Homology CDS 417339 418478 . - 0 ID=cds-WP_000528888.1;Parent=gene-SO06_RS05740;Dbxref=GenBank:WP_000528888.1;Name=WP_000528888.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=SO06_RS05740;product=RNA ligase RtcB family protein;protein_id=WP_000528888.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 418697 419752 . - . ID=gene-SO06_RS05745;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=SO06_RS05745 NZ_MYDG01000002.1 Protein Homology CDS 418697 419752 . - 0 ID=cds-WP_023231371.1;Parent=gene-SO06_RS05745;Dbxref=GenBank:WP_023231371.1;Name=WP_023231371.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=SO06_RS05745;product=DNA polymerase IV;protein_id=WP_023231371.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 420002 420742 . + . ID=gene-SO06_RS05750;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=SO06_RS05750 NZ_MYDG01000002.1 Protein Homology CDS 420002 420742 . + 0 ID=cds-WP_001225658.1;Parent=gene-SO06_RS05750;Dbxref=GenBank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=SO06_RS05750;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 420713 421480 . - . ID=gene-SO06_RS05755;Name=SO06_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05755 NZ_MYDG01000002.1 Protein Homology CDS 420713 421480 . - 0 ID=cds-WP_000333387.1;Parent=gene-SO06_RS05755;Dbxref=GenBank:WP_000333387.1;Name=WP_000333387.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=SO06_RS05755;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 421693 422271 . - . ID=gene-SO06_RS05760;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=SO06_RS05760 NZ_MYDG01000002.1 Protein Homology CDS 421693 422271 . - 0 ID=cds-WP_000284051.1;Parent=gene-SO06_RS05760;Dbxref=GenBank:WP_000284051.1;Name=WP_000284051.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=SO06_RS05760;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284051.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 422511 424955 . + . ID=gene-SO06_RS05765;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=SO06_RS05765 NZ_MYDG01000002.1 Protein Homology CDS 422511 424955 . + 0 ID=cds-WP_023209690.1;Parent=gene-SO06_RS05765;Dbxref=GenBank:WP_023209690.1;Name=WP_023209690.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=SO06_RS05765;product=acyl-CoA dehydrogenase FadE;protein_id=WP_023209690.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 425064 425831 . + . ID=gene-SO06_RS05770;Name=SO06_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05770 NZ_MYDG01000002.1 Protein Homology CDS 425064 425831 . + 0 ID=cds-WP_000015789.1;Parent=gene-SO06_RS05770;Dbxref=GenBank:WP_000015789.1;Name=WP_000015789.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=SO06_RS05770;product=amidohydrolase;protein_id=WP_000015789.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 426202 426609 . + . ID=gene-SO06_RS05775;Name=SO06_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05775 NZ_MYDG01000002.1 Protein Homology CDS 426202 426609 . + 0 ID=cds-WP_000788200.1;Parent=gene-SO06_RS05775;Dbxref=GenBank:WP_000788200.1;Name=WP_000788200.1;Ontology_term=GO:0006457,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=SO06_RS05775;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_000788200.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 426955 427674 . + . ID=gene-SO06_RS05780;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=SO06_RS05780 NZ_MYDG01000002.1 Protein Homology CDS 426955 427674 . + 0 ID=cds-WP_000787603.1;Parent=gene-SO06_RS05780;Dbxref=GenBank:WP_000787603.1;Name=WP_000787603.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=SO06_RS05780;product=adhesin/invasin protein PagN;protein_id=WP_000787603.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 427678 427892 . - . ID=gene-SO06_RS25255;Name=SO06_RS25255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25255;pseudo=true NZ_MYDG01000002.1 Protein Homology CDS 427678 427892 . - 0 ID=cds-SO06_RS25255;Parent=gene-SO06_RS25255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=SO06_RS25255;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 428012 428959 . - . ID=gene-SO06_RS05795;Name=SO06_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05795 NZ_MYDG01000002.1 Protein Homology CDS 428012 428959 . - 0 ID=cds-WP_000970302.1;Parent=gene-SO06_RS05795;Dbxref=GenBank:WP_000970302.1;Name=WP_000970302.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=SO06_RS05795;product=LysR family transcriptional regulator;protein_id=WP_000970302.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 429456 429693 . - . ID=gene-SO06_RS05800;Name=SO06_RS05800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS05800;partial=true;pseudo=true;start_range=.,429456 NZ_MYDG01000002.1 Protein Homology CDS 429456 429693 . - 0 ID=cds-SO06_RS05800;Parent=gene-SO06_RS05800;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=SO06_RS05800;partial=true;product=PerC family transcriptional regulator;pseudo=true;start_range=.,429456;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 429776 430597 . - . ID=gene-SO06_RS05805;Name=SO06_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05805 NZ_MYDG01000002.1 Protein Homology CDS 429776 430597 . - 0 ID=cds-WP_000119391.1;Parent=gene-SO06_RS05805;Dbxref=GenBank:WP_000119391.1;Name=WP_000119391.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=SO06_RS05805;product=polysaccharide deacetylase family protein;protein_id=WP_000119391.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 431005 431475 . - . ID=gene-SO06_RS05810;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=SO06_RS05810 NZ_MYDG01000002.1 Protein Homology CDS 431005 431475 . - 0 ID=cds-WP_023231370.1;Parent=gene-SO06_RS05810;Dbxref=GenBank:WP_023231370.1;Name=WP_023231370.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=SO06_RS05810;product=AfaD family invasin;protein_id=WP_023231370.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 431497 434007 . - . ID=gene-SO06_RS05815;Name=SO06_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05815 NZ_MYDG01000002.1 Protein Homology CDS 431497 434007 . - 0 ID=cds-WP_023231369.1;Parent=gene-SO06_RS05815;Dbxref=GenBank:WP_023231369.1;Name=WP_023231369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=SO06_RS05815;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_023231369.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 434031 434771 . - . ID=gene-SO06_RS05820;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=SO06_RS05820 NZ_MYDG01000002.1 Protein Homology CDS 434031 434771 . - 0 ID=cds-WP_000691916.1;Parent=gene-SO06_RS05820;Dbxref=GenBank:WP_000691916.1;Name=WP_000691916.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=SO06_RS05820;product=pili assembly chaperone SafB;protein_id=WP_000691916.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 434846 435343 . - . ID=gene-SO06_RS05825;Name=SO06_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05825 NZ_MYDG01000002.1 Protein Homology CDS 434846 435343 . - 0 ID=cds-WP_048348967.1;Parent=gene-SO06_RS05825;Dbxref=GenBank:WP_048348967.1;Name=WP_048348967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789648.1;locus_tag=SO06_RS05825;product=Saf-pilin pilus formation protein SafA;protein_id=WP_048348967.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 436092 436665 . - . ID=gene-SO06_RS05830;Name=SO06_RS05830;end_range=436665,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS05830;partial=true;pseudo=true NZ_MYDG01000002.1 Protein Homology CDS 436092 436665 . - 0 ID=cds-SO06_RS05830;Parent=gene-SO06_RS05830;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=436665,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=SO06_RS05830;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 436599 436796 . - . ID=gene-SO06_RS25765;Name=SO06_RS25765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25765 NZ_MYDG01000002.1 Protein Homology CDS 436599 436796 . - 0 ID=cds-WP_001224041.1;Parent=gene-SO06_RS25765;Dbxref=GenBank:WP_001224041.1;Name=WP_001224041.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=SO06_RS25765;product=transposase;protein_id=WP_001224041.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 436849 437163 . + . ID=gene-SO06_RS05840;Name=SO06_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05840 NZ_MYDG01000002.1 Protein Homology CDS 436849 437163 . + 0 ID=cds-WP_023892102.1;Parent=gene-SO06_RS05840;Dbxref=GenBank:WP_023892102.1;Name=WP_023892102.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=SO06_RS05840;product=SymE family type I addiction module toxin;protein_id=WP_023892102.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 437230 437508 . - . ID=gene-SO06_RS05845;Name=SO06_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05845 NZ_MYDG01000002.1 Protein Homology CDS 437230 437508 . - 0 ID=cds-WP_012543321.1;Parent=gene-SO06_RS05845;Dbxref=GenBank:WP_012543321.1;Name=WP_012543321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=SO06_RS05845;product=hypothetical protein;protein_id=WP_012543321.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 437639 437796 . - . ID=gene-SO06_RS25770;Name=SO06_RS25770;end_range=437796,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25770;partial=true;pseudo=true;start_range=.,437639 NZ_MYDG01000002.1 Protein Homology CDS 437639 437796 . - 0 ID=cds-SO06_RS25770;Parent=gene-SO06_RS25770;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=437796,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238642.1;locus_tag=SO06_RS25770;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,437639;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 437826 438293 . - . ID=gene-SO06_RS05855;Name=SO06_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05855 NZ_MYDG01000002.1 Protein Homology CDS 437826 438293 . - 0 ID=cds-WP_023232370.1;Parent=gene-SO06_RS05855;Dbxref=GenBank:WP_023232370.1;Name=WP_023232370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828176.1;locus_tag=SO06_RS05855;product=hypothetical protein;protein_id=WP_023232370.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 439166 439399 . - . ID=gene-SO06_RS24945;Name=SO06_RS24945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24945 NZ_MYDG01000002.1 GeneMarkS-2+ CDS 439166 439399 . - 0 ID=cds-WP_124741005.1;Parent=gene-SO06_RS24945;Dbxref=GenBank:WP_124741005.1;Name=WP_124741005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS24945;product=hypothetical protein;protein_id=WP_124741005.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 439424 439597 . - . ID=gene-SO06_RS25680;Name=SO06_RS25680;end_range=439597,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25680;partial=true;pseudo=true;start_range=.,439424 NZ_MYDG01000002.1 Protein Homology CDS 439424 439597 . - 0 ID=cds-SO06_RS25680;Parent=gene-SO06_RS25680;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=439597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=SO06_RS25680;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,439424;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 439724 439999 . + . ID=gene-SO06_RS05870;Name=SO06_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05870 NZ_MYDG01000002.1 Protein Homology CDS 439724 439999 . + 0 ID=cds-WP_023232369.1;Parent=gene-SO06_RS05870;Dbxref=GenBank:WP_023232369.1;Name=WP_023232369.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994228.1;locus_tag=SO06_RS05870;product=SymE family type I addiction module toxin;protein_id=WP_023232369.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 440056 440388 . - . ID=gene-SO06_RS05875;Name=SO06_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05875 NZ_MYDG01000002.1 Protein Homology CDS 440056 440388 . - 0 ID=cds-WP_001750702.1;Parent=gene-SO06_RS05875;Dbxref=GenBank:WP_001750702.1;Name=WP_001750702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750702.1;locus_tag=SO06_RS05875;product=barstar family protein;protein_id=WP_001750702.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 440388 445082 . - . ID=gene-SO06_RS25465;Name=SO06_RS25465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25465 NZ_MYDG01000002.1 Protein Homology CDS 440388 445082 . - 0 ID=cds-WP_023232368.1;Parent=gene-SO06_RS25465;Dbxref=GenBank:WP_023232368.1;Name=WP_023232368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539107.1;locus_tag=SO06_RS25465;product=RHS repeat-associated core domain-containing protein;protein_id=WP_023232368.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 445098 445556 . - . ID=gene-SO06_RS05885;Name=SO06_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05885 NZ_MYDG01000002.1 Protein Homology CDS 445098 445556 . - 0 ID=cds-WP_000186514.1;Parent=gene-SO06_RS05885;Dbxref=GenBank:WP_000186514.1;Name=WP_000186514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186512.1;locus_tag=SO06_RS05885;product=DcrB-related protein;protein_id=WP_000186514.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 445616 447850 . - . ID=gene-SO06_RS05890;Name=SO06_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05890 NZ_MYDG01000002.1 Protein Homology CDS 445616 447850 . - 0 ID=cds-WP_023232367.1;Parent=gene-SO06_RS05890;Dbxref=GenBank:WP_023232367.1;Name=WP_023232367.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505545.1;locus_tag=SO06_RS05890;product=type VI secretion system Vgr family protein;protein_id=WP_023232367.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 448246 448767 . - . ID=gene-SO06_RS05900;Name=SO06_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05900 NZ_MYDG01000002.1 Protein Homology CDS 448246 448767 . - 0 ID=cds-WP_000968384.1;Parent=gene-SO06_RS05900;Dbxref=GenBank:WP_000968384.1;Name=WP_000968384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=SO06_RS05900;product=DUF2778 domain-containing protein;protein_id=WP_000968384.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 448791 449207 . - . ID=gene-SO06_RS05905;Name=SO06_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05905 NZ_MYDG01000002.1 Protein Homology CDS 448791 449207 . - 0 ID=cds-WP_001596567.1;Parent=gene-SO06_RS05905;Dbxref=GenBank:WP_001596567.1;Name=WP_001596567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=SO06_RS05905;product=DUF2195 family protein;protein_id=WP_001596567.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 449204 449326 . - . ID=gene-SO06_RS25470;Name=SO06_RS25470;end_range=449326,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25470;partial=true;pseudo=true NZ_MYDG01000002.1 Protein Homology CDS 449204 449326 . - 0 ID=cds-SO06_RS25470;Parent=gene-SO06_RS25470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=449326,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459284.1;locus_tag=SO06_RS25470;partial=true;product=TagF domain-containing protein;pseudo=true;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 449335 449796 . - . ID=gene-SO06_RS05910;Name=SO06_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05910 NZ_MYDG01000002.1 Protein Homology CDS 449335 449796 . - 0 ID=cds-WP_001529547.1;Parent=gene-SO06_RS05910;Dbxref=GenBank:WP_001529547.1;Name=WP_001529547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670388.1;locus_tag=SO06_RS05910;product=hypothetical protein;protein_id=WP_001529547.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 449781 450251 . - . ID=gene-SO06_RS05915;Name=SO06_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05915 NZ_MYDG01000002.1 Protein Homology CDS 449781 450251 . - 0 ID=cds-WP_000528843.1;Parent=gene-SO06_RS05915;Dbxref=GenBank:WP_000528843.1;Name=WP_000528843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528842.1;locus_tag=SO06_RS05915;product=glucosaminidase domain-containing protein;protein_id=WP_000528843.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 450294 451061 . - . ID=gene-SO06_RS05920;Name=SO06_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05920 NZ_MYDG01000002.1 Protein Homology CDS 450294 451061 . - 0 ID=cds-WP_023232366.1;Parent=gene-SO06_RS05920;Dbxref=GenBank:WP_023232366.1;Name=WP_023232366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254119.1;locus_tag=SO06_RS05920;product=TagF domain-containing protein;protein_id=WP_023232366.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 451061 454930 . - . ID=gene-SO06_RS05925;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=SO06_RS05925 NZ_MYDG01000002.1 Protein Homology CDS 451061 454930 . - 0 ID=cds-WP_023232365.1;Parent=gene-SO06_RS05925;Dbxref=GenBank:WP_023232365.1;Name=WP_023232365.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=SO06_RS05925;product=Type VI secretion protein IcmF;protein_id=WP_023232365.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 455167 455661 . - . ID=gene-SO06_RS05930;Name=SO06_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05930 NZ_MYDG01000002.1 Protein Homology CDS 455167 455661 . - 0 ID=cds-WP_023216589.1;Parent=gene-SO06_RS05930;Dbxref=GenBank:WP_023216589.1;Name=WP_023216589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000803074.1;locus_tag=SO06_RS05930;product=T6SS effector amidase Tae4 family protein;protein_id=WP_023216589.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 455658 456443 . - . ID=gene-SO06_RS05935;Name=SO06_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05935 NZ_MYDG01000002.1 Protein Homology CDS 455658 456443 . - 0 ID=cds-WP_023232364.1;Parent=gene-SO06_RS05935;Dbxref=GenBank:WP_023232364.1;Name=WP_023232364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592737.1;locus_tag=SO06_RS05935;product=Rap1a/Tai family immunity protein;protein_id=WP_023232364.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 456448 457752 . - . ID=gene-SO06_RS05940;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=SO06_RS05940 NZ_MYDG01000002.1 Protein Homology CDS 456448 457752 . - 0 ID=cds-WP_023232363.1;Parent=gene-SO06_RS05940;Dbxref=GenBank:WP_023232363.1;Name=WP_023232363.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=SO06_RS05940;product=type VI secretion system protein TssL%2C long form;protein_id=WP_023232363.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 457749 459092 . - . ID=gene-SO06_RS05945;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=SO06_RS05945 NZ_MYDG01000002.1 Protein Homology CDS 457749 459092 . - 0 ID=cds-WP_000118732.1;Parent=gene-SO06_RS05945;Dbxref=GenBank:WP_000118732.1;Name=WP_000118732.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=SO06_RS05945;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118732.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 459096 459632 . - . ID=gene-SO06_RS05950;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=SO06_RS05950 NZ_MYDG01000002.1 Protein Homology CDS 459096 459632 . - 0 ID=cds-WP_023206382.1;Parent=gene-SO06_RS05950;Dbxref=GenBank:WP_023206382.1;Name=WP_023206382.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=SO06_RS05950;product=type VI secretion system lipoprotein TssJ;protein_id=WP_023206382.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 459699 460184 . - . ID=gene-SO06_RS05955;Name=SO06_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05955 NZ_MYDG01000002.1 Protein Homology CDS 459699 460184 . - 0 ID=cds-WP_000119443.1;Parent=gene-SO06_RS05955;Dbxref=GenBank:WP_000119443.1;Name=WP_000119443.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459277.1;locus_tag=SO06_RS05955;product=Hcp family type VI secretion system effector;protein_id=WP_000119443.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 460327 460710 . - . ID=gene-SO06_RS05960;Name=SO06_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05960 NZ_MYDG01000002.1 Protein Homology CDS 460327 460710 . - 0 ID=cds-WP_000379146.1;Parent=gene-SO06_RS05960;Dbxref=GenBank:WP_000379146.1;Name=WP_000379146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=SO06_RS05960;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_000379146.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 460695 461180 . - . ID=gene-SO06_RS05965;Name=SO06_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05965 NZ_MYDG01000002.1 Protein Homology CDS 460695 461180 . - 0 ID=cds-WP_001081550.1;Parent=gene-SO06_RS05965;Dbxref=GenBank:WP_001081550.1;Name=WP_001081550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=SO06_RS05965;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_001081550.1;transl_table=11 NZ_MYDG01000002.1 RefSeq pseudogene 461223 461417 . - . ID=gene-SO06_RS25475;Name=SO06_RS25475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25475;partial=true;pseudo=true;start_range=.,461223 NZ_MYDG01000002.1 Protein Homology CDS 461223 461417 . - 0 ID=cds-SO06_RS25475;Parent=gene-SO06_RS25475;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=SO06_RS25475;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;start_range=.,461223;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 461484 461969 . - . ID=gene-SO06_RS05970;Name=SO06_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05970 NZ_MYDG01000002.1 Protein Homology CDS 461484 461969 . - 0 ID=cds-WP_000312802.1;Parent=gene-SO06_RS05970;Dbxref=GenBank:WP_000312802.1;Name=WP_000312802.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=SO06_RS05970;product=Hcp family type VI secretion system effector;protein_id=WP_000312802.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 462223 462669 . - . ID=gene-SO06_RS05975;Name=SO06_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05975 NZ_MYDG01000002.1 Protein Homology CDS 462223 462669 . - 0 ID=cds-WP_306292545.1;Parent=gene-SO06_RS05975;Dbxref=GenBank:WP_306292545.1;Name=WP_306292545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535435.1;locus_tag=SO06_RS05975;product=STY0301 family protein;protein_id=WP_306292545.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 462682 462840 . - . ID=gene-SO06_RS05980;Name=SO06_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS05980 NZ_MYDG01000002.1 Protein Homology CDS 462682 462840 . - 0 ID=cds-WP_001584850.1;Parent=gene-SO06_RS05980;Dbxref=GenBank:WP_001584850.1;Name=WP_001584850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033857.1;locus_tag=SO06_RS05980;product=BPSL0067 family protein;protein_id=WP_001584850.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 462855 464363 . - . ID=gene-SO06_RS05985;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=SO06_RS05985 NZ_MYDG01000002.1 Protein Homology CDS 462855 464363 . - 0 ID=cds-WP_000013884.1;Parent=gene-SO06_RS05985;Dbxref=GenBank:WP_000013884.1;Name=WP_000013884.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=SO06_RS05985;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000013884.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 464387 464929 . - . ID=gene-SO06_RS05990;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=SO06_RS05990 NZ_MYDG01000002.1 Protein Homology CDS 464387 464929 . - 0 ID=cds-WP_000996815.1;Parent=gene-SO06_RS05990;Dbxref=GenBank:WP_000996815.1;Name=WP_000996815.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=SO06_RS05990;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996815.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 465029 467668 . - . ID=gene-SO06_RS05995;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=SO06_RS05995 NZ_MYDG01000002.1 Protein Homology CDS 465029 467668 . - 0 ID=cds-WP_023232361.1;Parent=gene-SO06_RS05995;Dbxref=GenBank:WP_023232361.1;Name=WP_023232361.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=SO06_RS05995;product=type VI secretion system ATPase TssH;protein_id=WP_023232361.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 468035 468937 . + . ID=gene-SO06_RS06000;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=SO06_RS06000 NZ_MYDG01000002.1 Protein Homology CDS 468035 468937 . + 0 ID=cds-WP_000806686.1;Parent=gene-SO06_RS06000;Dbxref=GenBank:WP_000806686.1;Name=WP_000806686.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=SO06_RS06000;product=type VI secretion system-associated protein TagK;protein_id=WP_000806686.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 468924 469748 . + . ID=gene-SO06_RS06005;Name=SO06_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06005 NZ_MYDG01000002.1 Protein Homology CDS 468924 469748 . + 0 ID=cds-WP_023232360.1;Parent=gene-SO06_RS06005;Dbxref=GenBank:WP_023232360.1;Name=WP_023232360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=SO06_RS06005;product=type VI secretion system accessory protein TagJ;protein_id=WP_023232360.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 469745 470239 . + . ID=gene-SO06_RS06010;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=SO06_RS06010 NZ_MYDG01000002.1 Protein Homology CDS 469745 470239 . + 0 ID=cds-WP_000108007.1;Parent=gene-SO06_RS06010;Dbxref=GenBank:WP_000108007.1;Name=WP_000108007.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=SO06_RS06010;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108007.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 470255 472138 . + . ID=gene-SO06_RS06015;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=SO06_RS06015 NZ_MYDG01000002.1 Protein Homology CDS 470255 472138 . + 0 ID=cds-WP_000371506.1;Parent=gene-SO06_RS06015;Dbxref=GenBank:WP_000371506.1;Name=WP_000371506.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=SO06_RS06015;product=type VI secretion system baseplate subunit TssF;protein_id=WP_000371506.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 472135 473130 . + . ID=gene-SO06_RS06020;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=SO06_RS06020 NZ_MYDG01000002.1 Protein Homology CDS 472135 473130 . + 0 ID=cds-WP_000145244.1;Parent=gene-SO06_RS06020;Dbxref=GenBank:WP_000145244.1;Name=WP_000145244.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=SO06_RS06020;product=type VI secretion system baseplate subunit TssG;protein_id=WP_000145244.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 473141 474196 . + . ID=gene-SO06_RS06025;Name=SO06_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06025 NZ_MYDG01000002.1 Protein Homology CDS 473141 474196 . + 0 ID=cds-WP_000367619.1;Parent=gene-SO06_RS06025;Dbxref=GenBank:WP_000367619.1;Name=WP_000367619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=SO06_RS06025;product=ImpA family type VI secretion system protein;protein_id=WP_000367619.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 474520 474596 . - . ID=gene-SO06_RS06030;Name=SO06_RS06030;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS06030 NZ_MYDG01000002.1 tRNAscan-SE tRNA 474520 474596 . - . ID=rna-SO06_RS06030;Parent=gene-SO06_RS06030;anticodon=(pos:complement(474560..474562));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS06030;product=tRNA-Asp NZ_MYDG01000002.1 tRNAscan-SE exon 474520 474596 . - . ID=exon-SO06_RS06030-1;Parent=rna-SO06_RS06030;anticodon=(pos:complement(474560..474562));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS06030;product=tRNA-Asp NZ_MYDG01000002.1 RefSeq gene 474730 475461 . - . ID=gene-SO06_RS06035;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=SO06_RS06035 NZ_MYDG01000002.1 Protein Homology CDS 474730 475461 . - 0 ID=cds-WP_001670675.1;Parent=gene-SO06_RS06035;Dbxref=GenBank:WP_001670675.1;Name=WP_001670675.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=SO06_RS06035;product=DNA polymerase III subunit epsilon;protein_id=WP_001670675.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 475525 475992 . + . ID=gene-SO06_RS06040;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=SO06_RS06040 NZ_MYDG01000002.1 Protein Homology CDS 475525 475992 . + 0 ID=cds-WP_000917872.1;Parent=gene-SO06_RS06040;Dbxref=GenBank:WP_000917872.1;Name=WP_000917872.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=SO06_RS06040;product=ribonuclease HI;protein_id=WP_000917872.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 475989 476711 . - . ID=gene-SO06_RS06045;Name=SO06_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06045 NZ_MYDG01000002.1 Protein Homology CDS 475989 476711 . - 0 ID=cds-WP_000801238.1;Parent=gene-SO06_RS06045;Dbxref=GenBank:WP_000801238.1;Name=WP_000801238.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=SO06_RS06045;product=class I SAM-dependent methyltransferase;protein_id=WP_000801238.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 476746 477501 . + . ID=gene-SO06_RS06050;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=SO06_RS06050 NZ_MYDG01000002.1 Protein Homology CDS 476746 477501 . + 0 ID=cds-WP_001052773.1;Parent=gene-SO06_RS06050;Dbxref=GenBank:WP_001052773.1;Name=WP_001052773.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=SO06_RS06050;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052773.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 477573 478940 . + . ID=gene-SO06_RS06055;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=SO06_RS06055 NZ_MYDG01000002.1 Protein Homology CDS 477573 478940 . + 0 ID=cds-WP_000644706.1;Parent=gene-SO06_RS06055;Dbxref=GenBank:WP_000644706.1;Name=WP_000644706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=SO06_RS06055;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 478996 479766 . - . ID=gene-SO06_RS06060;Name=SO06_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06060 NZ_MYDG01000002.1 Protein Homology CDS 478996 479766 . - 0 ID=cds-WP_000207237.1;Parent=gene-SO06_RS06060;Dbxref=GenBank:WP_000207237.1;Name=WP_000207237.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=SO06_RS06060;product=class I SAM-dependent methyltransferase;protein_id=WP_000207237.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 479844 480644 . - . ID=gene-SO06_RS06065;Name=SO06_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06065 NZ_MYDG01000002.1 Protein Homology CDS 479844 480644 . - 0 ID=cds-WP_001230970.1;Parent=gene-SO06_RS06065;Dbxref=GenBank:WP_001230970.1;Name=WP_001230970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=SO06_RS06065;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230970.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 480776 481951 . - . ID=gene-SO06_RS06070;Name=SO06_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06070 NZ_MYDG01000002.1 Protein Homology CDS 480776 481951 . - 0 ID=cds-WP_023232359.1;Parent=gene-SO06_RS06070;Dbxref=GenBank:WP_023232359.1;Name=WP_023232359.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=SO06_RS06070;product=MFS transporter;protein_id=WP_023232359.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 482056 482970 . + . ID=gene-SO06_RS06075;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=SO06_RS06075 NZ_MYDG01000002.1 Protein Homology CDS 482056 482970 . + 0 ID=cds-WP_000648534.1;Parent=gene-SO06_RS06075;Dbxref=GenBank:WP_000648534.1;Name=WP_000648534.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=SO06_RS06075;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648534.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 482991 483794 . - . ID=gene-SO06_RS06080;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=SO06_RS06080 NZ_MYDG01000002.1 Protein Homology CDS 482991 483794 . - 0 ID=cds-WP_000154878.1;Parent=gene-SO06_RS06080;Dbxref=GenBank:WP_000154878.1;Name=WP_000154878.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=SO06_RS06080;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000154878.1;transl_table=11 NZ_MYDG01000002.1 RefSeq gene 483959 484035 . - . ID=gene-SO06_RS06085;Name=SO06_RS06085;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS06085 NZ_MYDG01000002.1 tRNAscan-SE tRNA 483959 484035 . - . ID=rna-SO06_RS06085;Parent=gene-SO06_RS06085;anticodon=(pos:complement(483999..484001));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS06085;product=tRNA-Asp NZ_MYDG01000002.1 tRNAscan-SE exon 483959 484035 . - . ID=exon-SO06_RS06085-1;Parent=rna-SO06_RS06085;anticodon=(pos:complement(483999..484001));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS06085;product=tRNA-Asp NZ_MYDG01000002.1 RefSeq gene 484227 484342 . - . ID=gene-SO06_RS06090;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=SO06_RS06090 NZ_MYDG01000002.1 cmsearch rRNA 484227 484342 . - . ID=rna-SO06_RS06090;Parent=gene-SO06_RS06090;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS06090;product=5S ribosomal RNA NZ_MYDG01000002.1 cmsearch exon 484227 484342 . - . ID=exon-SO06_RS06090-1;Parent=rna-SO06_RS06090;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS06090;product=5S ribosomal RNA NZ_MYDG01000002.1 RefSeq gene 484539 484712 . - . ID=gene-SO06_RS06095;Name=SO06_RS06095;end_range=484712,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=SO06_RS06095;partial=true NZ_MYDG01000002.1 cmsearch rRNA 484539 484712 . - . ID=rna-SO06_RS06095;Parent=gene-SO06_RS06095;Dbxref=RFAM:RF02541;end_range=484712,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS06095;partial=true;product=23S ribosomal RNA NZ_MYDG01000002.1 cmsearch exon 484539 484712 . - . ID=exon-SO06_RS06095-1;Parent=rna-SO06_RS06095;Dbxref=RFAM:RF02541;end_range=484712,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS06095;partial=true;product=23S ribosomal RNA ##sequence-region NZ_MYDG01000030.1 1 43385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000030.1 RefSeq region 1 43385 . + . ID=NZ_MYDG01000030.1:1..43385;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000030.1 RefSeq gene 296 1243 . + . ID=gene-SO06_RS22760;Name=SO06_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22760 NZ_MYDG01000030.1 Protein Homology CDS 296 1243 . + 0 ID=cds-WP_000534911.1;Parent=gene-SO06_RS22760;Dbxref=GenBank:WP_000534911.1;Name=WP_000534911.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=SO06_RS22760;product=LysR family transcriptional regulator;protein_id=WP_000534911.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 1370 1714 . + . ID=gene-SO06_RS22765;Name=SO06_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22765 NZ_MYDG01000030.1 Protein Homology CDS 1370 1714 . + 0 ID=cds-WP_000026889.1;Parent=gene-SO06_RS22765;Dbxref=GenBank:WP_000026889.1;Name=WP_000026889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=SO06_RS22765;product=phage holin family protein;protein_id=WP_000026889.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 1775 2308 . - . ID=gene-SO06_RS22770;Name=SO06_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22770 NZ_MYDG01000030.1 Protein Homology CDS 1775 2308 . - 0 ID=cds-WP_080204287.1;Parent=gene-SO06_RS22770;Dbxref=GenBank:WP_080204287.1;Name=WP_080204287.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=SO06_RS22770;product=glycoside hydrolase family 108 protein;protein_id=WP_080204287.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 2325 2768 . - . ID=gene-SO06_RS22775;Name=SO06_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22775 NZ_MYDG01000030.1 Protein Homology CDS 2325 2768 . - 0 ID=cds-WP_000860681.1;Parent=gene-SO06_RS22775;Dbxref=GenBank:WP_000860681.1;Name=WP_000860681.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=SO06_RS22775;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000860681.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 3149 5248 . + . ID=gene-SO06_RS22780;Name=SO06_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22780 NZ_MYDG01000030.1 Protein Homology CDS 3149 5248 . + 0 ID=cds-WP_001647498.1;Parent=gene-SO06_RS22780;Dbxref=GenBank:WP_001647498.1;Name=WP_001647498.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=SO06_RS22780;product=glycosyl hydrolase family 18 protein;protein_id=WP_001647498.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 5341 8337 . + . ID=gene-SO06_RS22785;Name=SO06_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22785 NZ_MYDG01000030.1 Protein Homology CDS 5341 8337 . + 0 ID=cds-WP_023232155.1;Parent=gene-SO06_RS22785;Dbxref=GenBank:WP_023232155.1;Name=WP_023232155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=SO06_RS22785;product=hypothetical protein;protein_id=WP_023232155.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 8618 9322 . + . ID=gene-SO06_RS22790;Name=SO06_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22790 NZ_MYDG01000030.1 Protein Homology CDS 8618 9322 . + 0 ID=cds-WP_000738619.1;Parent=gene-SO06_RS22790;Dbxref=GenBank:WP_000738619.1;Name=WP_000738619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=SO06_RS22790;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000738619.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 9752 10294 . + . ID=gene-SO06_RS22795;Name=SO06_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22795 NZ_MYDG01000030.1 Protein Homology CDS 9752 10294 . + 0 ID=cds-WP_023232154.1;Parent=gene-SO06_RS22795;Dbxref=GenBank:WP_023232154.1;Name=WP_023232154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=SO06_RS22795;product=fimbrial protein BcfA;protein_id=WP_023232154.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 10395 11081 . + . ID=gene-SO06_RS22800;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=SO06_RS22800 NZ_MYDG01000030.1 Protein Homology CDS 10395 11081 . + 0 ID=cds-WP_000739906.1;Parent=gene-SO06_RS22800;Dbxref=GenBank:WP_000739906.1;Name=WP_000739906.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=SO06_RS22800;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_000739906.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 11086 13707 . + . ID=gene-SO06_RS22805;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=SO06_RS22805 NZ_MYDG01000030.1 Protein Homology CDS 11086 13707 . + 0 ID=cds-WP_048349004.1;Parent=gene-SO06_RS22805;Dbxref=GenBank:WP_048349004.1;Name=WP_048349004.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=SO06_RS22805;product=fimbrial usher BcfC;protein_id=WP_048349004.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 13708 14715 . + . ID=gene-SO06_RS22810;Name=SO06_RS22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22810 NZ_MYDG01000030.1 Protein Homology CDS 13708 14715 . + 0 ID=cds-WP_080204288.1;Parent=gene-SO06_RS22810;Dbxref=GenBank:WP_080204288.1;Name=WP_080204288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=SO06_RS22810;product=fimbrial protein BcfD;protein_id=WP_080204288.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 14716 15261 . + . ID=gene-SO06_RS22815;Name=SO06_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22815 NZ_MYDG01000030.1 Protein Homology CDS 14716 15261 . + 0 ID=cds-WP_001082038.1;Parent=gene-SO06_RS22815;Dbxref=GenBank:WP_001082038.1;Name=WP_001082038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=SO06_RS22815;product=fimbrial protein BcfE;protein_id=WP_001082038.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 15277 15795 . + . ID=gene-SO06_RS22820;Name=SO06_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22820 NZ_MYDG01000030.1 Protein Homology CDS 15277 15795 . + 0 ID=cds-WP_001243233.1;Parent=gene-SO06_RS22820;Dbxref=GenBank:WP_001243233.1;Name=WP_001243233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=SO06_RS22820;product=fimbrial protein BcfF;protein_id=WP_001243233.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 15761 16492 . + . ID=gene-SO06_RS22825;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=SO06_RS22825 NZ_MYDG01000030.1 Protein Homology CDS 15761 16492 . + 0 ID=cds-WP_001135034.1;Parent=gene-SO06_RS22825;Dbxref=GenBank:WP_001135034.1;Name=WP_001135034.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=SO06_RS22825;product=fimbrial chaperone BcfG;protein_id=WP_001135034.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 16557 17402 . + . ID=gene-SO06_RS22830;Name=SO06_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22830 NZ_MYDG01000030.1 Protein Homology CDS 16557 17402 . + 0 ID=cds-WP_000291393.1;Parent=gene-SO06_RS22830;Dbxref=GenBank:WP_000291393.1;Name=WP_000291393.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=SO06_RS22830;product=DsbA family protein;protein_id=WP_000291393.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 17441 17728 . + . ID=gene-SO06_RS22835;Name=SO06_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22835 NZ_MYDG01000030.1 Protein Homology CDS 17441 17728 . + 0 ID=cds-WP_000839833.1;Parent=gene-SO06_RS22835;Dbxref=GenBank:WP_000839833.1;Name=WP_000839833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=SO06_RS22835;product=hypothetical protein;protein_id=WP_000839833.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 17828 18277 . - . ID=gene-SO06_RS22840;Name=SO06_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22840 NZ_MYDG01000030.1 Protein Homology CDS 17828 18277 . - 0 ID=cds-WP_039517481.1;Parent=gene-SO06_RS22840;Dbxref=GenBank:WP_039517481.1;Name=WP_039517481.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=SO06_RS22840;product=winged helix-turn-helix domain-containing protein;protein_id=WP_039517481.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 19067 19228 . + . ID=gene-SO06_RS22845;Name=SO06_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22845 NZ_MYDG01000030.1 Protein Homology CDS 19067 19228 . + 0 ID=cds-WP_001658456.1;Parent=gene-SO06_RS22845;Dbxref=GenBank:WP_001658456.1;Name=WP_001658456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001658456.1;locus_tag=SO06_RS22845;product=hypothetical protein;protein_id=WP_001658456.1;transl_table=11 NZ_MYDG01000030.1 RefSeq pseudogene 19346 19740 . - . ID=gene-SO06_RS25625;Name=SO06_RS25625;end_range=19740,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25625;partial=true;pseudo=true NZ_MYDG01000030.1 Protein Homology CDS 19346 19740 . - 0 ID=cds-SO06_RS25625;Parent=gene-SO06_RS25625;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009166,GO:0016787;end_range=19740,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015633260.1;locus_tag=SO06_RS25625;partial=true;product=5'-nucleotidase C-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_MYDG01000030.1 RefSeq pseudogene 19755 19927 . - . ID=gene-SO06_RS25630;Name=SO06_RS25630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25630;partial=true;pseudo=true;start_range=.,19755 NZ_MYDG01000030.1 Protein Homology CDS 19755 19927 . - 0 ID=cds-SO06_RS25630;Parent=gene-SO06_RS25630;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=SO06_RS25630;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,19755;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 20183 20947 . + . ID=gene-SO06_RS22855;Name=SO06_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22855 NZ_MYDG01000030.1 Protein Homology CDS 20183 20947 . + 0 ID=cds-WP_000052612.1;Parent=gene-SO06_RS22855;Dbxref=GenBank:WP_000052612.1;Name=WP_000052612.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052612.1;locus_tag=SO06_RS22855;product=outer membrane protein OmpK;protein_id=WP_000052612.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 20968 22461 . + . ID=gene-SO06_RS22860;Name=SO06_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22860 NZ_MYDG01000030.1 Protein Homology CDS 20968 22461 . + 0 ID=cds-WP_000754367.1;Parent=gene-SO06_RS22860;Dbxref=GenBank:WP_000754367.1;Name=WP_000754367.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=SO06_RS22860;product=sulfatase family protein;protein_id=WP_000754367.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 22565 23761 . + . ID=gene-SO06_RS22865;Name=SO06_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22865 NZ_MYDG01000030.1 Protein Homology CDS 22565 23761 . + 0 ID=cds-WP_001519625.1;Parent=gene-SO06_RS22865;Dbxref=GenBank:WP_001519625.1;Name=WP_001519625.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519625.1;locus_tag=SO06_RS22865;product=anaerobic sulfatase maturase;protein_id=WP_001519625.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 23779 25032 . + . ID=gene-SO06_RS22870;Name=SO06_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22870 NZ_MYDG01000030.1 Protein Homology CDS 23779 25032 . + 0 ID=cds-WP_000457885.1;Parent=gene-SO06_RS22870;Dbxref=GenBank:WP_000457885.1;Name=WP_000457885.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457886.1;locus_tag=SO06_RS22870;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=WP_000457885.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 25151 25408 . + . ID=gene-SO06_RS22875;Name=SO06_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22875 NZ_MYDG01000030.1 Protein Homology CDS 25151 25408 . + 0 ID=cds-WP_000528983.1;Parent=gene-SO06_RS22875;Dbxref=GenBank:WP_000528983.1;Name=WP_000528983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528979.1;locus_tag=SO06_RS22875;product=hypothetical protein;protein_id=WP_000528983.1;transl_table=11 NZ_MYDG01000030.1 RefSeq pseudogene 25330 25557 . + . ID=gene-SO06_RS22880;Name=SO06_RS22880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS22880;partial=true;pseudo=true;start_range=.,25330 NZ_MYDG01000030.1 Protein Homology CDS 25330 25557 . + 0 ID=cds-SO06_RS22880;Parent=gene-SO06_RS22880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=SO06_RS22880;partial=true;product=aryl-sulfate sulfotransferase;pseudo=true;start_range=.,25330;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 25720 26886 . + . ID=gene-SO06_RS22885;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=SO06_RS22885 NZ_MYDG01000030.1 Protein Homology CDS 25720 26886 . + 0 ID=cds-WP_000681340.1;Parent=gene-SO06_RS22885;Dbxref=GenBank:WP_000681340.1;Name=WP_000681340.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=SO06_RS22885;product=Na+/H+ antiporter NhaA;protein_id=WP_000681340.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 26948 27847 . + . ID=gene-SO06_RS22890;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=SO06_RS22890 NZ_MYDG01000030.1 Protein Homology CDS 26948 27847 . + 0 ID=cds-WP_000062872.1;Parent=gene-SO06_RS22890;Dbxref=GenBank:WP_000062872.1;Name=WP_000062872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=SO06_RS22890;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 27902 29941 . - . ID=gene-SO06_RS22895;Name=SO06_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22895 NZ_MYDG01000030.1 Protein Homology CDS 27902 29941 . - 0 ID=cds-WP_001647565.1;Parent=gene-SO06_RS22895;Dbxref=GenBank:WP_001647565.1;Name=WP_001647565.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=SO06_RS22895;product=glycoside hydrolase family 31 protein;protein_id=WP_001647565.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 29981 31354 . - . ID=gene-SO06_RS22900;Name=SO06_RS22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22900 NZ_MYDG01000030.1 Protein Homology CDS 29981 31354 . - 0 ID=cds-WP_000099989.1;Parent=gene-SO06_RS22900;Dbxref=GenBank:WP_000099989.1;Name=WP_000099989.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=SO06_RS22900;product=MFS transporter;protein_id=WP_000099989.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 31810 32073 . - . ID=gene-SO06_RS22905;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=SO06_RS22905 NZ_MYDG01000030.1 Protein Homology CDS 31810 32073 . - 0 ID=cds-WP_001518655.1;Parent=gene-SO06_RS22905;Dbxref=GenBank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=SO06_RS22905;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 32179 32394 . + . ID=gene-SO06_RS22910;Name=SO06_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22910 NZ_MYDG01000030.1 Protein Homology CDS 32179 32394 . + 0 ID=cds-WP_001726890.1;Parent=gene-SO06_RS22910;Dbxref=GenBank:WP_001726890.1;Name=WP_001726890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=SO06_RS22910;product=DUF2575 family protein;protein_id=WP_001726890.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 32402 33340 . + . ID=gene-SO06_RS22915;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=SO06_RS22915 NZ_MYDG01000030.1 Protein Homology CDS 32402 33340 . + 0 ID=cds-WP_000767311.1;Parent=gene-SO06_RS22915;Dbxref=GenBank:WP_000767311.1;Name=WP_000767311.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=SO06_RS22915;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767311.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 33385 36219 . + . ID=gene-SO06_RS22920;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=SO06_RS22920 NZ_MYDG01000030.1 Protein Homology CDS 33385 36219 . + 0 ID=cds-WP_023232148.1;Parent=gene-SO06_RS22920;Dbxref=GenBank:WP_023232148.1;Name=WP_023232148.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=SO06_RS22920;product=isoleucine--tRNA ligase;protein_id=WP_023232148.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 36219 36719 . + . ID=gene-SO06_RS22925;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=SO06_RS22925 NZ_MYDG01000030.1 Protein Homology CDS 36219 36719 . + 0 ID=cds-WP_000042736.1;Parent=gene-SO06_RS22925;Dbxref=GenBank:WP_000042736.1;Name=WP_000042736.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=SO06_RS22925;product=signal peptidase II;protein_id=WP_000042736.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 36874 37323 . + . ID=gene-SO06_RS22935;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=SO06_RS22935 NZ_MYDG01000030.1 Protein Homology CDS 36874 37323 . + 0 ID=cds-WP_000047269.1;Parent=gene-SO06_RS22935;Dbxref=GenBank:WP_000047269.1;Name=WP_000047269.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=SO06_RS22935;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 37326 38276 . + . ID=gene-SO06_RS22940;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=SO06_RS22940 NZ_MYDG01000030.1 Protein Homology CDS 37326 38276 . + 0 ID=cds-WP_001166428.1;Parent=gene-SO06_RS22940;Dbxref=GenBank:WP_001166428.1;Name=WP_001166428.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=SO06_RS22940;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166428.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 38476 39678 . + . ID=gene-SO06_RS22945;Name=SO06_RS22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22945 NZ_MYDG01000030.1 Protein Homology CDS 38476 39678 . + 0 ID=cds-WP_023232147.1;Parent=gene-SO06_RS22945;Dbxref=GenBank:WP_023232147.1;Name=WP_023232147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=SO06_RS22945;product=XAC2610-related protein;protein_id=WP_023232147.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 39694 40614 . + . ID=gene-SO06_RS22950;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=SO06_RS22950 NZ_MYDG01000030.1 Protein Homology CDS 39694 40614 . + 0 ID=cds-WP_023232146.1;Parent=gene-SO06_RS22950;Dbxref=GenBank:WP_023232146.1;Name=WP_023232146.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=SO06_RS22950;product=ribonucleoside hydrolase RihC;protein_id=WP_023232146.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 40636 41322 . - . ID=gene-SO06_RS22955;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=SO06_RS22955 NZ_MYDG01000030.1 Protein Homology CDS 40636 41322 . - 0 ID=cds-WP_000377415.1;Parent=gene-SO06_RS22955;Dbxref=GenBank:WP_000377415.1;Name=WP_000377415.1;gbkey=CDS;gene=citB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=SO06_RS22955;product=citrate response regulator transcription factor CitB;protein_id=WP_000377415.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 41324 42943 . - . ID=gene-SO06_RS22960;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=SO06_RS22960 NZ_MYDG01000030.1 Protein Homology CDS 41324 42943 . - 0 ID=cds-WP_023216942.1;Parent=gene-SO06_RS22960;Dbxref=GenBank:WP_023216942.1;Name=WP_023216942.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=SO06_RS22960;product=citrate sensor histidine kinase CitA;protein_id=WP_023216942.1;transl_table=11 NZ_MYDG01000030.1 RefSeq gene 43078 43385 . - . ID=gene-SO06_RS22965;Name=SO06_RS22965;end_range=43385,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22965;partial=true NZ_MYDG01000030.1 Protein Homology CDS 43078 43385 . - 2 ID=cds-WP_139771308.1;Parent=gene-SO06_RS22965;Dbxref=GenBank:WP_139771308.1;Name=WP_139771308.1;Ontology_term=GO:0006814,GO:0016829;end_range=43385,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462261.1;locus_tag=SO06_RS22965;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_139771308.1;transl_table=11 ##sequence-region NZ_MYDG01000031.1 1 34436 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000031.1 RefSeq region 1 34436 . + . ID=NZ_MYDG01000031.1:1..34436;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000031.1 RefSeq gene 1 122 . + . ID=gene-SO06_RS22970;Name=SO06_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22970;partial=true;start_range=.,1 NZ_MYDG01000031.1 Protein Homology CDS 1 122 . + 2 ID=cds-WP_176210692.1;Parent=gene-SO06_RS22970;Dbxref=GenBank:WP_176210692.1;Name=WP_176210692.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=SO06_RS22970;partial=true;product=ethanolamine ammonia-lyase light chain EutC;protein_id=WP_176210692.1;start_range=.,1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 132 791 . + . ID=gene-SO06_RS22975;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=SO06_RS22975 NZ_MYDG01000031.1 Protein Homology CDS 132 791 . + 0 ID=cds-WP_001111056.1;Parent=gene-SO06_RS22975;Dbxref=GenBank:WP_001111056.1;Name=WP_001111056.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=SO06_RS22975;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111056.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 804 1298 . + . ID=gene-SO06_RS22980;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=SO06_RS22980 NZ_MYDG01000031.1 Protein Homology CDS 804 1298 . + 0 ID=cds-WP_000606271.1;Parent=gene-SO06_RS22980;Dbxref=GenBank:WP_000606271.1;Name=WP_000606271.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=SO06_RS22980;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606271.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 1346 2398 . + . ID=gene-SO06_RS22985;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=SO06_RS22985 NZ_MYDG01000031.1 Protein Homology CDS 1346 2398 . + 0 ID=cds-WP_079984581.1;Parent=gene-SO06_RS22985;Dbxref=GenBank:WP_079984581.1;Name=WP_079984581.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=SO06_RS22985;product=HTH-type transcriptional regulator EutR;protein_id=WP_079984581.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 2597 3874 . - . ID=gene-SO06_RS22990;Name=SO06_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22990 NZ_MYDG01000031.1 Protein Homology CDS 2597 3874 . - 0 ID=cds-WP_080204289.1;Parent=gene-SO06_RS22990;Dbxref=GenBank:WP_080204289.1;Name=WP_080204289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=SO06_RS22990;product=DUF1963 domain-containing protein;protein_id=WP_080204289.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 4003 4332 . - . ID=gene-SO06_RS22995;Name=SO06_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS22995 NZ_MYDG01000031.1 Protein Homology CDS 4003 4332 . - 0 ID=cds-WP_001194342.1;Parent=gene-SO06_RS22995;Dbxref=GenBank:WP_001194342.1;Name=WP_001194342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=SO06_RS22995;product=hypothetical protein;protein_id=WP_001194342.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 4353 5252 . - . ID=gene-SO06_RS23000;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=SO06_RS23000 NZ_MYDG01000031.1 Protein Homology CDS 4353 5252 . - 0 ID=cds-WP_080204290.1;Parent=gene-SO06_RS23000;Dbxref=GenBank:WP_080204290.1;Name=WP_080204290.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=SO06_RS23000;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_080204290.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 5255 6124 . - . ID=gene-SO06_RS23005;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=SO06_RS23005 NZ_MYDG01000031.1 Protein Homology CDS 5255 6124 . - 0 ID=cds-WP_000102880.1;Parent=gene-SO06_RS23005;Dbxref=GenBank:WP_000102880.1;Name=WP_000102880.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=SO06_RS23005;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102880.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 6337 6762 . + . ID=gene-SO06_RS23010;Name=SO06_RS23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23010 NZ_MYDG01000031.1 Protein Homology CDS 6337 6762 . + 0 ID=cds-WP_000406008.1;Parent=gene-SO06_RS23010;Dbxref=GenBank:WP_000406008.1;Name=WP_000406008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=SO06_RS23010;product=GNAT family acetyltransferase;protein_id=WP_000406008.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 6749 7198 . + . ID=gene-SO06_RS23015;Name=SO06_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23015 NZ_MYDG01000031.1 Protein Homology CDS 6749 7198 . + 0 ID=cds-WP_000842940.1;Parent=gene-SO06_RS23015;Dbxref=GenBank:WP_000842940.1;Name=WP_000842940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=SO06_RS23015;product=DUF2919 domain-containing protein;protein_id=WP_000842940.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 7260 7835 . + . ID=gene-SO06_RS23020;Name=SO06_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23020 NZ_MYDG01000031.1 Protein Homology CDS 7260 7835 . + 0 ID=cds-WP_000838968.1;Parent=gene-SO06_RS23020;Dbxref=GenBank:WP_000838968.1;Name=WP_000838968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=SO06_RS23020;product=RpoE-regulated lipoprotein;protein_id=WP_000838968.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 7930 8829 . + . ID=gene-SO06_RS23025;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=SO06_RS23025 NZ_MYDG01000031.1 Protein Homology CDS 7930 8829 . + 0 ID=cds-WP_000084583.1;Parent=gene-SO06_RS23025;Dbxref=GenBank:WP_000084583.1;Name=WP_000084583.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=SO06_RS23025;product=porphyrinogen peroxidase;protein_id=WP_000084583.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 9067 9858 . + . ID=gene-SO06_RS23030;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=SO06_RS23030 NZ_MYDG01000031.1 Protein Homology CDS 9067 9858 . + 0 ID=cds-WP_000517460.1;Parent=gene-SO06_RS23030;Dbxref=GenBank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=SO06_RS23030;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 10016 11032 . + . ID=gene-SO06_RS23035;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=SO06_RS23035 NZ_MYDG01000031.1 Protein Homology CDS 10016 11032 . + 0 ID=cds-WP_000290274.1;Parent=gene-SO06_RS23035;Dbxref=GenBank:WP_000290274.1;Name=WP_000290274.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=SO06_RS23035;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290274.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 11032 11865 . + . ID=gene-SO06_RS23040;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=SO06_RS23040 NZ_MYDG01000031.1 Protein Homology CDS 11032 11865 . + 0 ID=cds-WP_000881746.1;Parent=gene-SO06_RS23040;Dbxref=GenBank:WP_000881746.1;Name=WP_000881746.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=SO06_RS23040;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000881746.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 11865 12740 . + . ID=gene-SO06_RS23045;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=SO06_RS23045 NZ_MYDG01000031.1 Protein Homology CDS 11865 12740 . + 0 ID=cds-WP_000852705.1;Parent=gene-SO06_RS23045;Dbxref=GenBank:WP_000852705.1;Name=WP_000852705.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=SO06_RS23045;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852705.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 12730 13827 . + . ID=gene-SO06_RS23050;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=SO06_RS23050 NZ_MYDG01000031.1 Protein Homology CDS 12730 13827 . + 0 ID=cds-WP_000021076.1;Parent=gene-SO06_RS23050;Dbxref=GenBank:WP_000021076.1;Name=WP_000021076.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=SO06_RS23050;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021076.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 13895 14806 . + . ID=gene-SO06_RS23055;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=SO06_RS23055 NZ_MYDG01000031.1 Protein Homology CDS 13895 14806 . + 0 ID=cds-WP_023231426.1;Parent=gene-SO06_RS23055;Dbxref=GenBank:WP_023231426.1;Name=WP_023231426.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=SO06_RS23055;product=cysteine synthase CysM;protein_id=WP_023231426.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 14937 15476 . - . ID=gene-SO06_RS23065;Name=SO06_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23065 NZ_MYDG01000031.1 Protein Homology CDS 14937 15476 . - 0 ID=cds-WP_023231427.1;Parent=gene-SO06_RS23065;Dbxref=GenBank:WP_023231427.1;Name=WP_023231427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461374.1;locus_tag=SO06_RS23065;product=transglycosylase domain-containing protein;protein_id=WP_023231427.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 15489 15869 . - . ID=gene-SO06_RS23070;Name=SO06_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23070 NZ_MYDG01000031.1 Protein Homology CDS 15489 15869 . - 0 ID=cds-WP_000710730.1;Parent=gene-SO06_RS23070;Dbxref=GenBank:WP_000710730.1;Name=WP_000710730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461373.2;locus_tag=SO06_RS23070;product=YfeK family protein;protein_id=WP_000710730.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 15928 16647 . - . ID=gene-SO06_RS23075;Name=SO06_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23075 NZ_MYDG01000031.1 Protein Homology CDS 15928 16647 . - 0 ID=cds-WP_023231428.1;Parent=gene-SO06_RS23075;Dbxref=GenBank:WP_023231428.1;Name=WP_023231428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=SO06_RS23075;product=type 1 glutamine amidotransferase;protein_id=WP_023231428.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 16662 17954 . - . ID=gene-SO06_RS23080;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=SO06_RS23080 NZ_MYDG01000031.1 Protein Homology CDS 16662 17954 . - 0 ID=cds-WP_023231429.1;Parent=gene-SO06_RS23080;Dbxref=GenBank:WP_023231429.1;Name=WP_023231429.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=SO06_RS23080;product=MocR-like B6 salvage transcription factor PtsJ;protein_id=WP_023231429.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 18037 18903 . + . ID=gene-SO06_RS23085;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=SO06_RS23085 NZ_MYDG01000031.1 Protein Homology CDS 18037 18903 . + 0 ID=cds-WP_000529613.1;Parent=gene-SO06_RS23085;Dbxref=GenBank:WP_000529613.1;Name=WP_000529613.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=SO06_RS23085;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000529613.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 18900 19139 . + . ID=gene-SO06_RS23090;Name=SO06_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23090 NZ_MYDG01000031.1 Protein Homology CDS 18900 19139 . + 0 ID=cds-WP_000844541.1;Parent=gene-SO06_RS23090;Dbxref=GenBank:WP_000844541.1;Name=WP_000844541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=SO06_RS23090;product=hypothetical protein;protein_id=WP_000844541.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 19303 19812 . - . ID=gene-SO06_RS23095;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=SO06_RS23095 NZ_MYDG01000031.1 Protein Homology CDS 19303 19812 . - 0 ID=cds-WP_000522253.1;Parent=gene-SO06_RS23095;Dbxref=GenBank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=SO06_RS23095;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 19853 21580 . - . ID=gene-SO06_RS23100;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=SO06_RS23100 NZ_MYDG01000031.1 Protein Homology CDS 19853 21580 . - 0 ID=cds-WP_000623118.1;Parent=gene-SO06_RS23100;Dbxref=GenBank:WP_000623118.1;Name=WP_000623118.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=SO06_RS23100;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623118.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 21629 21886 . - . ID=gene-SO06_RS23105;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=SO06_RS23105 NZ_MYDG01000031.1 Protein Homology CDS 21629 21886 . - 0 ID=cds-WP_000487600.1;Parent=gene-SO06_RS23105;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=SO06_RS23105;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 22270 23241 . - . ID=gene-SO06_RS23110;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=SO06_RS23110 NZ_MYDG01000031.1 Protein Homology CDS 22270 23241 . - 0 ID=cds-WP_000036904.1;Parent=gene-SO06_RS23110;Dbxref=GenBank:WP_000036904.1;Name=WP_000036904.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=SO06_RS23110;product=cysteine synthase A;protein_id=WP_000036904.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 23405 24166 . - . ID=gene-SO06_RS23115;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=SO06_RS23115 NZ_MYDG01000031.1 Protein Homology CDS 23405 24166 . - 0 ID=cds-WP_000255008.1;Parent=gene-SO06_RS23115;Dbxref=GenBank:WP_000255008.1;Name=WP_000255008.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=SO06_RS23115;product=sulfate transporter CysZ;protein_id=WP_000255008.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 24398 25384 . + . ID=gene-SO06_RS23125;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=SO06_RS23125 NZ_MYDG01000031.1 Protein Homology CDS 24398 25384 . + 0 ID=cds-WP_023231430.1;Parent=gene-SO06_RS23125;Dbxref=GenBank:WP_023231430.1;Name=WP_023231430.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=SO06_RS23125;product=cell division protein ZipA;protein_id=WP_023231430.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 25456 27471 . + . ID=gene-SO06_RS23130;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=SO06_RS23130 NZ_MYDG01000031.1 Protein Homology CDS 25456 27471 . + 0 ID=cds-WP_023201637.1;Parent=gene-SO06_RS23130;Dbxref=GenBank:WP_023201637.1;Name=WP_023201637.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=SO06_RS23130;product=NAD-dependent DNA ligase LigA;protein_id=WP_023201637.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 27473 27691 . + . ID=gene-SO06_RS23135;Name=SO06_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23135 NZ_MYDG01000031.1 Protein Homology CDS 27473 27691 . + 0 ID=cds-WP_001519708.1;Parent=gene-SO06_RS23135;Dbxref=GenBank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=SO06_RS23135;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 27688 28686 . - . ID=gene-SO06_RS23140;Name=SO06_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23140 NZ_MYDG01000031.1 Protein Homology CDS 27688 28686 . - 0 ID=cds-WP_000765569.1;Parent=gene-SO06_RS23140;Dbxref=GenBank:WP_000765569.1;Name=WP_000765569.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=SO06_RS23140;product=bile acid:sodium symporter family protein;protein_id=WP_000765569.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 28776 29702 . + . ID=gene-SO06_RS23145;Name=SO06_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23145 NZ_MYDG01000031.1 Protein Homology CDS 28776 29702 . + 0 ID=cds-WP_001109831.1;Parent=gene-SO06_RS23145;Dbxref=GenBank:WP_001109831.1;Name=WP_001109831.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=SO06_RS23145;product=LysR family transcriptional regulator;protein_id=WP_001109831.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 29764 30525 . - . ID=gene-SO06_RS23150;Name=SO06_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23150 NZ_MYDG01000031.1 Protein Homology CDS 29764 30525 . - 0 ID=cds-WP_000722926.1;Parent=gene-SO06_RS23150;Dbxref=GenBank:WP_000722926.1;Name=WP_000722926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=SO06_RS23150;product=outer membrane protein;protein_id=WP_000722926.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 30781 31614 . + . ID=gene-SO06_RS23155;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=SO06_RS23155 NZ_MYDG01000031.1 Protein Homology CDS 30781 31614 . + 0 ID=cds-WP_001119742.1;Parent=gene-SO06_RS23155;Dbxref=GenBank:WP_001119742.1;Name=WP_001119742.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=SO06_RS23155;product=xanthosine phosphorylase;protein_id=WP_001119742.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 31669 32925 . + . ID=gene-SO06_RS23160;Name=SO06_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23160 NZ_MYDG01000031.1 Protein Homology CDS 31669 32925 . + 0 ID=cds-WP_000513241.1;Parent=gene-SO06_RS23160;Dbxref=GenBank:WP_000513241.1;Name=WP_000513241.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=SO06_RS23160;product=nucleoside permease;protein_id=WP_000513241.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 32984 33142 . + . ID=gene-SO06_RS23165;Name=SO06_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23165 NZ_MYDG01000031.1 Protein Homology CDS 32984 33142 . + 0 ID=cds-WP_000658727.1;Parent=gene-SO06_RS23165;Dbxref=GenBank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=SO06_RS23165;product=XapX domain-containing protein;protein_id=WP_000658727.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 33194 34078 . + . ID=gene-SO06_RS23170;Name=SO06_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23170 NZ_MYDG01000031.1 Protein Homology CDS 33194 34078 . + 0 ID=cds-WP_000438882.1;Parent=gene-SO06_RS23170;Dbxref=GenBank:WP_000438882.1;Name=WP_000438882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=SO06_RS23170;product=LysR family transcriptional regulator;protein_id=WP_000438882.1;transl_table=11 NZ_MYDG01000031.1 RefSeq gene 34293 34368 . - . ID=gene-SO06_RS23175;Name=SO06_RS23175;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS23175 NZ_MYDG01000031.1 tRNAscan-SE tRNA 34293 34368 . - . ID=rna-SO06_RS23175;Parent=gene-SO06_RS23175;anticodon=(pos:complement(34333..34335));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS23175;product=tRNA-Lys NZ_MYDG01000031.1 tRNAscan-SE exon 34293 34368 . - . ID=exon-SO06_RS23175-1;Parent=rna-SO06_RS23175;anticodon=(pos:complement(34333..34335));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS23175;product=tRNA-Lys ##sequence-region NZ_MYDG01000032.1 1 32453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000032.1 RefSeq region 1 32453 . + . ID=NZ_MYDG01000032.1:1..32453;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000032.1 RefSeq gene 1 74 . + . ID=gene-SO06_RS23180;Name=SO06_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23180;partial=true;start_range=.,1 NZ_MYDG01000032.1 Protein Homology CDS 1 74 . + 2 ID=cds-WP_001680644.1;Parent=gene-SO06_RS23180;Dbxref=GenBank:WP_001680644.1;Name=WP_001680644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=SO06_RS23180;partial=true;product=hypothetical protein;protein_id=WP_001680644.1;start_range=.,1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 304 687 . + . ID=gene-SO06_RS23185;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=SO06_RS23185 NZ_MYDG01000032.1 Protein Homology CDS 304 687 . + 0 ID=cds-WP_001275691.1;Parent=gene-SO06_RS23185;Dbxref=GenBank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=SO06_RS23185;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 689 1234 . + . ID=gene-SO06_RS23190;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=SO06_RS23190 NZ_MYDG01000032.1 Protein Homology CDS 689 1234 . + 0 ID=cds-WP_001287521.1;Parent=gene-SO06_RS23190;Dbxref=GenBank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=SO06_RS23190;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 1392 1820 . + . ID=gene-SO06_RS23195;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=SO06_RS23195 NZ_MYDG01000032.1 Protein Homology CDS 1392 1820 . + 0 ID=cds-WP_001085926.1;Parent=gene-SO06_RS23195;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=SO06_RS23195;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 1824 2528 . + . ID=gene-SO06_RS23200;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=SO06_RS23200 NZ_MYDG01000032.1 Protein Homology CDS 1824 2528 . + 0 ID=cds-WP_001096676.1;Parent=gene-SO06_RS23200;Dbxref=GenBank:WP_001096676.1;Name=WP_001096676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=SO06_RS23200;product=50S ribosomal protein L1;protein_id=WP_001096676.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 2961 3458 . + . ID=gene-SO06_RS23210;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=SO06_RS23210 NZ_MYDG01000032.1 Protein Homology CDS 2961 3458 . + 0 ID=cds-WP_001207203.1;Parent=gene-SO06_RS23210;Dbxref=GenBank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=SO06_RS23210;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 3525 3890 . + . ID=gene-SO06_RS23215;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=SO06_RS23215 NZ_MYDG01000032.1 Protein Homology CDS 3525 3890 . + 0 ID=cds-WP_000028882.1;Parent=gene-SO06_RS23215;Dbxref=GenBank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=SO06_RS23215;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 4208 8236 . + . ID=gene-SO06_RS23220;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=SO06_RS23220 NZ_MYDG01000032.1 Protein Homology CDS 4208 8236 . + 0 ID=cds-WP_000263105.1;Parent=gene-SO06_RS23220;Dbxref=GenBank:WP_000263105.1;Name=WP_000263105.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=SO06_RS23220;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263105.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 8313 12536 . + . ID=gene-SO06_RS23225;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=SO06_RS23225 NZ_MYDG01000032.1 Protein Homology CDS 8313 12536 . + 0 ID=cds-WP_000653965.1;Parent=gene-SO06_RS23225;Dbxref=GenBank:WP_000653965.1;Name=WP_000653965.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=SO06_RS23225;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653965.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 12578 12904 . + . ID=gene-SO06_RS23230;Name=SO06_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23230 NZ_MYDG01000032.1 Protein Homology CDS 12578 12904 . + 0 ID=cds-WP_077909207.1;Parent=gene-SO06_RS23230;Dbxref=GenBank:WP_077909207.1;Name=WP_077909207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675457.1;locus_tag=SO06_RS23230;product=hypothetical protein;protein_id=WP_077909207.1;transl_table=11 NZ_MYDG01000032.1 RefSeq pseudogene 12906 13249 . - . ID=gene-SO06_RS23235;Name=SO06_RS23235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS23235;pseudo=true NZ_MYDG01000032.1 Protein Homology CDS 12906 13249 . - 0 ID=cds-SO06_RS23235;Parent=gene-SO06_RS23235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=SO06_RS23235;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 13630 14658 . + . ID=gene-SO06_RS23245;Name=SO06_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23245 NZ_MYDG01000032.1 Protein Homology CDS 13630 14658 . + 0 ID=cds-WP_023231862.1;Parent=gene-SO06_RS23245;Dbxref=GenBank:WP_023231862.1;Name=WP_023231862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=SO06_RS23245;product=type III secretion system effector arginine glycosyltransferase SseK1;protein_id=WP_023231862.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 14879 16012 . - . ID=gene-SO06_RS23250;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=SO06_RS23250 NZ_MYDG01000032.1 Protein Homology CDS 14879 16012 . - 0 ID=cds-WP_023231861.1;Parent=gene-SO06_RS23250;Dbxref=GenBank:WP_023231861.1;Name=WP_023231861.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=SO06_RS23250;product=2-iminoacetate synthase ThiH;protein_id=WP_023231861.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 16009 16779 . - . ID=gene-SO06_RS23255;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=SO06_RS23255 NZ_MYDG01000032.1 Protein Homology CDS 16009 16779 . - 0 ID=cds-WP_000944074.1;Parent=gene-SO06_RS23255;Dbxref=GenBank:WP_000944074.1;Name=WP_000944074.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=SO06_RS23255;product=thiazole synthase;protein_id=WP_000944074.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 16781 16981 . - . ID=gene-SO06_RS23260;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=SO06_RS23260 NZ_MYDG01000032.1 Protein Homology CDS 16781 16981 . - 0 ID=cds-WP_023231860.1;Parent=gene-SO06_RS23260;Dbxref=GenBank:WP_023231860.1;Name=WP_023231860.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=SO06_RS23260;product=sulfur carrier protein ThiS;protein_id=WP_023231860.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 16962 17720 . - . ID=gene-SO06_RS23265;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=SO06_RS23265 NZ_MYDG01000032.1 Protein Homology CDS 16962 17720 . - 0 ID=cds-WP_023231859.1;Parent=gene-SO06_RS23265;Dbxref=GenBank:WP_023231859.1;Name=WP_023231859.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=SO06_RS23265;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_023231859.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 17713 18348 . - . ID=gene-SO06_RS23270;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=SO06_RS23270 NZ_MYDG01000032.1 Protein Homology CDS 17713 18348 . - 0 ID=cds-WP_023231858.1;Parent=gene-SO06_RS23270;Dbxref=GenBank:WP_023231858.1;Name=WP_023231858.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=SO06_RS23270;product=thiamine phosphate synthase;protein_id=WP_023231858.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 18348 20243 . - . ID=gene-SO06_RS23275;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=SO06_RS23275 NZ_MYDG01000032.1 Protein Homology CDS 18348 20243 . - 0 ID=cds-WP_023231857.1;Parent=gene-SO06_RS23275;Dbxref=GenBank:WP_023231857.1;Name=WP_023231857.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541272.1;locus_tag=SO06_RS23275;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_023231857.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 20607 21095 . - . ID=gene-SO06_RS23280;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=SO06_RS23280 NZ_MYDG01000032.1 Protein Homology CDS 20607 21095 . - 0 ID=cds-WP_000934315.1;Parent=gene-SO06_RS23280;Dbxref=GenBank:WP_000934315.1;Name=WP_000934315.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=SO06_RS23280;product=sigma D regulator;protein_id=WP_000934315.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 21188 21961 . + . ID=gene-SO06_RS23285;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=SO06_RS23285 NZ_MYDG01000032.1 Protein Homology CDS 21188 21961 . + 0 ID=cds-WP_079822866.1;Parent=gene-SO06_RS23285;Dbxref=GenBank:WP_079822866.1;Name=WP_079822866.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=SO06_RS23285;product=NAD(+) diphosphatase;protein_id=WP_079822866.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 22002 23066 . + . ID=gene-SO06_RS23290;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=SO06_RS23290 NZ_MYDG01000032.1 Protein Homology CDS 22002 23066 . + 0 ID=cds-WP_023231856.1;Parent=gene-SO06_RS23290;Dbxref=GenBank:WP_023231856.1;Name=WP_023231856.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=SO06_RS23290;product=uroporphyrinogen decarboxylase;protein_id=WP_023231856.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 23076 23747 . + . ID=gene-SO06_RS23295;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=SO06_RS23295 NZ_MYDG01000032.1 Protein Homology CDS 23076 23747 . + 0 ID=cds-WP_000362359.1;Parent=gene-SO06_RS23295;Dbxref=GenBank:WP_000362359.1;Name=WP_000362359.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=SO06_RS23295;product=deoxyribonuclease V;protein_id=WP_000362359.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 23789 24379 . + . ID=gene-SO06_RS23300;Name=SO06_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23300 NZ_MYDG01000032.1 Protein Homology CDS 23789 24379 . + 0 ID=cds-WP_000940092.1;Parent=gene-SO06_RS23300;Dbxref=GenBank:WP_000940092.1;Name=WP_000940092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=SO06_RS23300;product=YjaG family protein;protein_id=WP_000940092.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 24566 24838 . + . ID=gene-SO06_RS23305;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=SO06_RS23305 NZ_MYDG01000032.1 Protein Homology CDS 24566 24838 . + 0 ID=cds-WP_001044509.1;Parent=gene-SO06_RS23305;Dbxref=GenBank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=SO06_RS23305;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044509.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 24850 25542 . + . ID=gene-SO06_RS23310;Name=SO06_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23310 NZ_MYDG01000032.1 Protein Homology CDS 24850 25542 . + 0 ID=cds-WP_001083940.1;Parent=gene-SO06_RS23310;Dbxref=GenBank:WP_001083940.1;Name=WP_001083940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=SO06_RS23310;product=DUF1481 domain-containing protein;protein_id=WP_001083940.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 25584 26039 . - . ID=gene-SO06_RS23315;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=SO06_RS23315 NZ_MYDG01000032.1 Protein Homology CDS 25584 26039 . - 0 ID=cds-WP_000828129.1;Parent=gene-SO06_RS23315;Dbxref=GenBank:WP_000828129.1;Name=WP_000828129.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=SO06_RS23315;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828129.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 26293 27690 . + . ID=gene-SO06_RS23320;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=SO06_RS23320 NZ_MYDG01000032.1 Protein Homology CDS 26293 27690 . + 0 ID=cds-WP_023231855.1;Parent=gene-SO06_RS23320;Dbxref=GenBank:WP_023231855.1;Name=WP_023231855.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=SO06_RS23320;product=two-component system sensor histidine kinase ZraS;protein_id=WP_023231855.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 27696 29021 . + . ID=gene-SO06_RS23325;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=SO06_RS23325 NZ_MYDG01000032.1 Protein Homology CDS 27696 29021 . + 0 ID=cds-WP_000617928.1;Parent=gene-SO06_RS23325;Dbxref=GenBank:WP_000617928.1;Name=WP_000617928.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=SO06_RS23325;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000617928.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 29018 30307 . - . ID=gene-SO06_RS23330;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=SO06_RS23330 NZ_MYDG01000032.1 Protein Homology CDS 29018 30307 . - 0 ID=cds-WP_000866771.1;Parent=gene-SO06_RS23330;Dbxref=GenBank:WP_000866771.1;Name=WP_000866771.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=SO06_RS23330;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866771.1;transl_table=11 NZ_MYDG01000032.1 RefSeq gene 30323 31912 . - . ID=gene-SO06_RS23335;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=SO06_RS23335 NZ_MYDG01000032.1 Protein Homology CDS 30323 31912 . - 0 ID=cds-WP_023231854.1;Parent=gene-SO06_RS23335;Dbxref=GenBank:WP_023231854.1;Name=WP_023231854.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=SO06_RS23335;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_023231854.1;transl_table=11 ##sequence-region NZ_MYDG01000033.1 1 30458 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000033.1 RefSeq region 1 30458 . + . ID=NZ_MYDG01000033.1:1..30458;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000033.1 RefSeq gene 1 202 . - . ID=gene-SO06_RS23340;Name=SO06_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23340;partial=true;start_range=.,1 NZ_MYDG01000033.1 Protein Homology CDS 1 202 . - 0 ID=cds-WP_000031658.1;Parent=gene-SO06_RS23340;Dbxref=GenBank:WP_000031658.1;Name=WP_000031658.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=SO06_RS23340;partial=true;product=GTP-binding protein;protein_id=WP_000031658.1;start_range=.,1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 274 2388 . - . ID=gene-SO06_RS23345;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=SO06_RS23345 NZ_MYDG01000033.1 Protein Homology CDS 274 2388 . - 0 ID=cds-WP_000124693.1;Parent=gene-SO06_RS23345;Dbxref=GenBank:WP_000124693.1;Name=WP_000124693.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=SO06_RS23345;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 2485 2955 . - . ID=gene-SO06_RS23350;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=SO06_RS23350 NZ_MYDG01000033.1 Protein Homology CDS 2485 2955 . - 0 ID=cds-WP_001138043.1;Parent=gene-SO06_RS23350;Dbxref=GenBank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=SO06_RS23350;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 3051 3425 . - . ID=gene-SO06_RS23355;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=SO06_RS23355 NZ_MYDG01000033.1 Protein Homology CDS 3051 3425 . - 0 ID=cds-WP_000246815.1;Parent=gene-SO06_RS23355;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=SO06_RS23355;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 3551 3838 . - . ID=gene-SO06_RS23360;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=SO06_RS23360 NZ_MYDG01000033.1 Protein Homology CDS 3551 3838 . - 0 ID=cds-WP_000903400.1;Parent=gene-SO06_RS23360;Dbxref=GenBank:WP_000903400.1;Name=WP_000903400.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=SO06_RS23360;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903400.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 3846 4202 . - . ID=gene-SO06_RS23365;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=SO06_RS23365 NZ_MYDG01000033.1 Protein Homology CDS 3846 4202 . - 0 ID=cds-WP_000820705.1;Parent=gene-SO06_RS23365;Dbxref=GenBank:WP_000820705.1;Name=WP_000820705.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=SO06_RS23365;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820705.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 4202 4588 . - . ID=gene-SO06_RS23370;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=SO06_RS23370 NZ_MYDG01000033.1 Protein Homology CDS 4202 4588 . - 0 ID=cds-WP_001268011.1;Parent=gene-SO06_RS23370;Dbxref=GenBank:WP_001268011.1;Name=WP_001268011.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=SO06_RS23370;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268011.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 4588 5310 . - . ID=gene-SO06_RS23375;Name=SO06_RS23375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23375 NZ_MYDG01000033.1 Protein Homology CDS 4588 5310 . - 0 ID=cds-WP_000091471.1;Parent=gene-SO06_RS23375;Dbxref=GenBank:WP_000091471.1;Name=WP_000091471.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=SO06_RS23375;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091471.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 5587 6405 . - . ID=gene-SO06_RS23380;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=SO06_RS23380 NZ_MYDG01000033.1 Protein Homology CDS 5587 6405 . - 0 ID=cds-WP_079827363.1;Parent=gene-SO06_RS23380;Dbxref=GenBank:WP_079827363.1;Name=WP_079827363.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=SO06_RS23380;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_079827363.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 6625 6843 . + . ID=gene-SO06_RS23385;Name=SO06_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23385 NZ_MYDG01000033.1 Protein Homology CDS 6625 6843 . + 0 ID=cds-WP_001152701.1;Parent=gene-SO06_RS23385;Dbxref=GenBank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=SO06_RS23385;product=protein SlyX;protein_id=WP_001152701.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 7032 7622 . - . ID=gene-SO06_RS23390;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=SO06_RS23390 NZ_MYDG01000033.1 Protein Homology CDS 7032 7622 . - 0 ID=cds-WP_000861341.1;Parent=gene-SO06_RS23390;Dbxref=GenBank:WP_000861341.1;Name=WP_000861341.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=SO06_RS23390;product=peptidylprolyl isomerase;protein_id=WP_000861341.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 7717 7917 . - . ID=gene-SO06_RS23395;Name=SO06_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23395 NZ_MYDG01000033.1 Protein Homology CDS 7717 7917 . - 0 ID=cds-WP_001007735.1;Parent=gene-SO06_RS23395;Dbxref=GenBank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=SO06_RS23395;product=YheV family putative zinc ribbon protein;protein_id=WP_001007735.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 7927 9732 . - . ID=gene-SO06_RS23400;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=SO06_RS23400 NZ_MYDG01000033.1 Protein Homology CDS 7927 9732 . - 0 ID=cds-WP_000398133.1;Parent=gene-SO06_RS23400;Dbxref=GenBank:WP_000398133.1;Name=WP_000398133.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=SO06_RS23400;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000398133.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 9732 10283 . - . ID=gene-SO06_RS23405;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=SO06_RS23405 NZ_MYDG01000033.1 Protein Homology CDS 9732 10283 . - 0 ID=cds-WP_000081820.1;Parent=gene-SO06_RS23405;Dbxref=GenBank:WP_000081820.1;Name=WP_000081820.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=SO06_RS23405;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_000081820.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 10549 12456 . + . ID=gene-SO06_RS23410;Name=SO06_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23410 NZ_MYDG01000033.1 Protein Homology CDS 10549 12456 . + 0 ID=cds-WP_000634764.1;Parent=gene-SO06_RS23410;Dbxref=GenBank:WP_000634764.1;Name=WP_000634764.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=SO06_RS23410;product=ABC transporter ATP-binding protein;protein_id=WP_000634764.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 12619 12840 . + . ID=gene-SO06_RS23415;Name=SO06_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23415 NZ_MYDG01000033.1 Protein Homology CDS 12619 12840 . + 0 ID=cds-WP_023231898.1;Parent=gene-SO06_RS23415;Dbxref=GenBank:WP_023231898.1;Name=WP_023231898.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=SO06_RS23415;product=helix-turn-helix domain-containing protein;protein_id=WP_023231898.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 12842 13153 . - . ID=gene-SO06_RS23420;Name=SO06_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23420 NZ_MYDG01000033.1 Protein Homology CDS 12842 13153 . - 0 ID=cds-WP_000047689.1;Parent=gene-SO06_RS23420;Dbxref=GenBank:WP_000047689.1;Name=WP_000047689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=SO06_RS23420;product=monooxygenase;protein_id=WP_000047689.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 13351 14418 . + . ID=gene-SO06_RS23425;Name=SO06_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23425 NZ_MYDG01000033.1 Protein Homology CDS 13351 14418 . + 0 ID=cds-WP_077248395.1;Parent=gene-SO06_RS23425;Dbxref=GenBank:WP_077248395.1;Name=WP_077248395.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=SO06_RS23425;product=hydrolase;protein_id=WP_077248395.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 14415 14633 . + . ID=gene-SO06_RS23430;Name=SO06_RS23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23430 NZ_MYDG01000033.1 Protein Homology CDS 14415 14633 . + 0 ID=cds-WP_000586568.1;Parent=gene-SO06_RS23430;Dbxref=GenBank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=SO06_RS23430;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 14685 15554 . + . ID=gene-SO06_RS23435;Name=SO06_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23435 NZ_MYDG01000033.1 Protein Homology CDS 14685 15554 . + 0 ID=cds-WP_001274690.1;Parent=gene-SO06_RS23435;Dbxref=GenBank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=SO06_RS23435;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 15650 16054 . - . ID=gene-SO06_RS23440;Name=SO06_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23440 NZ_MYDG01000033.1 Protein Homology CDS 15650 16054 . - 0 ID=cds-WP_001148919.1;Parent=gene-SO06_RS23440;Dbxref=GenBank:WP_001148919.1;Name=WP_001148919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=SO06_RS23440;product=OsmC family protein;protein_id=WP_001148919.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 16362 16994 . + . ID=gene-SO06_RS23455;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=SO06_RS23455 NZ_MYDG01000033.1 Protein Homology CDS 16362 16994 . + 0 ID=cds-WP_000242758.1;Parent=gene-SO06_RS23455;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=SO06_RS23455;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 17043 19130 . + . ID=gene-SO06_RS23460;Name=SO06_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23460 NZ_MYDG01000033.1 Protein Homology CDS 17043 19130 . + 0 ID=cds-WP_000269312.1;Parent=gene-SO06_RS23460;Dbxref=GenBank:WP_000269312.1;Name=WP_000269312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=SO06_RS23460;product=YccS/YhfK family putative transporter;protein_id=WP_000269312.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 19173 20390 . - . ID=gene-SO06_RS23465;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=SO06_RS23465 NZ_MYDG01000033.1 Protein Homology CDS 19173 20390 . - 0 ID=cds-WP_023181213.1;Parent=gene-SO06_RS23465;Dbxref=GenBank:WP_023181213.1;Name=WP_023181213.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=SO06_RS23465;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_023181213.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 20476 21039 . - . ID=gene-SO06_RS23470;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=SO06_RS23470 NZ_MYDG01000033.1 Protein Homology CDS 20476 21039 . - 0 ID=cds-WP_080204291.1;Parent=gene-SO06_RS23470;Dbxref=GenBank:WP_080204291.1;Name=WP_080204291.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=SO06_RS23470;product=aminodeoxychorismate synthase component 2;protein_id=WP_080204291.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 21071 21673 . - . ID=gene-SO06_RS23475;Name=SO06_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23475 NZ_MYDG01000033.1 Protein Homology CDS 21071 21673 . - 0 ID=cds-WP_001280665.1;Parent=gene-SO06_RS23475;Dbxref=GenBank:WP_001280665.1;Name=WP_001280665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=SO06_RS23475;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280665.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 21663 21830 . - . ID=gene-SO06_RS23480;Name=SO06_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23480 NZ_MYDG01000033.1 Protein Homology CDS 21663 21830 . - 0 ID=cds-WP_001519136.1;Parent=gene-SO06_RS23480;Dbxref=GenBank:WP_001519136.1;Name=WP_001519136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=SO06_RS23480;product=YhfG family protein;protein_id=WP_001519136.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 21939 22511 . - . ID=gene-SO06_RS23485;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=SO06_RS23485 NZ_MYDG01000033.1 Protein Homology CDS 21939 22511 . - 0 ID=cds-WP_000920478.1;Parent=gene-SO06_RS23485;Dbxref=GenBank:WP_000920478.1;Name=WP_000920478.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=SO06_RS23485;product=peptidylprolyl isomerase A;protein_id=WP_000920478.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 22788 23969 . + . ID=gene-SO06_RS23490;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=SO06_RS23490 NZ_MYDG01000033.1 Protein Homology CDS 22788 23969 . + 0 ID=cds-WP_023231897.1;Parent=gene-SO06_RS23490;Dbxref=GenBank:WP_023231897.1;Name=WP_023231897.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=SO06_RS23490;product=MFS transporter TsgA;protein_id=WP_023231897.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 24287 26830 . + . ID=gene-SO06_RS23495;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=SO06_RS23495 NZ_MYDG01000033.1 Protein Homology CDS 24287 26830 . + 0 ID=cds-WP_023231896.1;Parent=gene-SO06_RS23495;Dbxref=GenBank:WP_023231896.1;Name=WP_023231896.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=SO06_RS23495;product=NADPH-nitrite reductase large subunit;protein_id=WP_023231896.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 26827 27153 . + . ID=gene-SO06_RS23500;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=SO06_RS23500 NZ_MYDG01000033.1 Protein Homology CDS 26827 27153 . + 0 ID=cds-WP_000084817.1;Parent=gene-SO06_RS23500;Dbxref=GenBank:WP_000084817.1;Name=WP_000084817.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=SO06_RS23500;product=nitrite reductase small subunit NirD;protein_id=WP_000084817.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 27419 28228 . + . ID=gene-SO06_RS23505;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=SO06_RS23505 NZ_MYDG01000033.1 Protein Homology CDS 27419 28228 . + 0 ID=cds-WP_023231895.1;Parent=gene-SO06_RS23505;Dbxref=GenBank:WP_023231895.1;Name=WP_023231895.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=SO06_RS23505;product=nitrite transporter NirC;protein_id=WP_023231895.1;transl_table=11 NZ_MYDG01000033.1 RefSeq gene 28240 29613 . + . ID=gene-SO06_RS23510;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=SO06_RS23510 NZ_MYDG01000033.1 Protein Homology CDS 28240 29613 . + 0 ID=cds-WP_020899313.1;Parent=gene-SO06_RS23510;Dbxref=GenBank:WP_020899313.1;Name=WP_020899313.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=SO06_RS23510;product=siroheme synthase CysG;protein_id=WP_020899313.1;transl_table=11 NZ_MYDG01000033.1 RefSeq pseudogene 29942 30458 . + . ID=gene-SO06_RS23515;Name=SO06_RS23515;end_range=30458,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS23515;partial=true;pseudo=true NZ_MYDG01000033.1 Protein Homology CDS 29942 30458 . + 0 ID=cds-SO06_RS23515;Parent=gene-SO06_RS23515;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=30458,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=SO06_RS23515;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_MYDG01000034.1 1 28682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000034.1 RefSeq region 1 28682 . + . ID=NZ_MYDG01000034.1:1..28682;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000034.1 RefSeq gene 173 1609 . - . ID=gene-SO06_RS23520;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=SO06_RS23520 NZ_MYDG01000034.1 Protein Homology CDS 173 1609 . - 0 ID=cds-WP_000069440.1;Parent=gene-SO06_RS23520;Dbxref=GenBank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=SO06_RS23520;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 1950 2426 . + . ID=gene-SO06_RS23525;Name=SO06_RS23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23525 NZ_MYDG01000034.1 Protein Homology CDS 1950 2426 . + 0 ID=cds-WP_001267291.1;Parent=gene-SO06_RS23525;Dbxref=GenBank:WP_001267291.1;Name=WP_001267291.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=SO06_RS23525;product=FxsA family protein;protein_id=WP_001267291.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 2485 3726 . - . ID=gene-SO06_RS23530;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=SO06_RS23530 NZ_MYDG01000034.1 Protein Homology CDS 2485 3726 . - 0 ID=cds-WP_023231654.1;Parent=gene-SO06_RS23530;Dbxref=GenBank:WP_023231654.1;Name=WP_023231654.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=SO06_RS23530;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_023231654.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 4002 4295 . + . ID=gene-SO06_RS23535;Name=SO06_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23535 NZ_MYDG01000034.1 Protein Homology CDS 4002 4295 . + 0 ID=cds-WP_000027827.1;Parent=gene-SO06_RS23535;Dbxref=GenBank:WP_000027827.1;Name=WP_000027827.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=SO06_RS23535;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 4339 5985 . + . ID=gene-SO06_RS23540;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=SO06_RS23540 NZ_MYDG01000034.1 Protein Homology CDS 4339 5985 . + 0 ID=cds-WP_000729126.1;Parent=gene-SO06_RS23540;Dbxref=GenBank:WP_000729126.1;Name=WP_000729126.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=SO06_RS23540;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 7079 8776 . + . ID=gene-SO06_RS23545;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=SO06_RS23545 NZ_MYDG01000034.1 Protein Homology CDS 7079 8776 . + 0 ID=cds-WP_023231653.1;Parent=gene-SO06_RS23545;Dbxref=GenBank:WP_023231653.1;Name=WP_023231653.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441217.1;locus_tag=SO06_RS23545;product=group II intron reverse transcriptase/maturase;protein_id=WP_023231653.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 9110 9463 . + . ID=gene-SO06_RS23550;Name=SO06_RS23550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23550 NZ_MYDG01000034.1 Protein Homology CDS 9110 9463 . + 0 ID=cds-WP_000558210.1;Parent=gene-SO06_RS23550;Dbxref=GenBank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=SO06_RS23550;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 9511 10368 . - . ID=gene-SO06_RS23555;Name=SO06_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23555 NZ_MYDG01000034.1 Protein Homology CDS 9511 10368 . - 0 ID=cds-WP_001229227.1;Parent=gene-SO06_RS23555;Dbxref=GenBank:WP_001229227.1;Name=WP_001229227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=SO06_RS23555;product=YjeJ family protein;protein_id=WP_001229227.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 10650 11678 . - . ID=gene-SO06_RS23560;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=SO06_RS23560 NZ_MYDG01000034.1 Protein Homology CDS 10650 11678 . - 0 ID=cds-WP_000940482.1;Parent=gene-SO06_RS23560;Dbxref=GenBank:WP_000940482.1;Name=WP_000940482.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=SO06_RS23560;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940482.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 11719 12285 . + . ID=gene-SO06_RS23565;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=SO06_RS23565 NZ_MYDG01000034.1 Protein Homology CDS 11719 12285 . + 0 ID=cds-WP_000257282.1;Parent=gene-SO06_RS23565;Dbxref=GenBank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=SO06_RS23565;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 12346 12480 . + . ID=gene-SO06_RS23570;Name=SO06_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23570 NZ_MYDG01000034.1 Protein Homology CDS 12346 12480 . + 0 ID=cds-WP_001670700.1;Parent=gene-SO06_RS23570;Dbxref=GenBank:WP_001670700.1;Name=WP_001670700.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=SO06_RS23570;product=entericidin A/B family lipoprotein;protein_id=WP_001670700.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 12588 12734 . + . ID=gene-SO06_RS23575;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=SO06_RS23575 NZ_MYDG01000034.1 Protein Homology CDS 12588 12734 . + 0 ID=cds-WP_000239598.1;Parent=gene-SO06_RS23575;Dbxref=GenBank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=SO06_RS23575;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 12765 13352 . - . ID=gene-SO06_RS23580;Name=SO06_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23580 NZ_MYDG01000034.1 Protein Homology CDS 12765 13352 . - 0 ID=cds-WP_000912959.1;Parent=gene-SO06_RS23580;Dbxref=GenBank:WP_000912959.1;Name=WP_000912959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=SO06_RS23580;product=helix-turn-helix transcriptional regulator;protein_id=WP_000912959.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 13609 13926 . + . ID=gene-SO06_RS23585;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=SO06_RS23585 NZ_MYDG01000034.1 Protein Homology CDS 13609 13926 . + 0 ID=cds-WP_000118469.1;Parent=gene-SO06_RS23585;Dbxref=GenBank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=SO06_RS23585;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 13943 14476 . - . ID=gene-SO06_RS23590;Name=SO06_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23590 NZ_MYDG01000034.1 Protein Homology CDS 13943 14476 . - 0 ID=cds-WP_001238398.1;Parent=gene-SO06_RS23590;Dbxref=GenBank:WP_001238398.1;Name=WP_001238398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=SO06_RS23590;product=lipocalin family protein;protein_id=WP_001238398.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 14587 14946 . - . ID=gene-SO06_RS23595;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=SO06_RS23595 NZ_MYDG01000034.1 Protein Homology CDS 14587 14946 . - 0 ID=cds-WP_000609650.1;Parent=gene-SO06_RS23595;Dbxref=GenBank:WP_000609650.1;Name=WP_000609650.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=SO06_RS23595;product=fumarate reductase subunit FrdD;protein_id=WP_000609650.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 14957 15352 . - . ID=gene-SO06_RS23600;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=SO06_RS23600 NZ_MYDG01000034.1 Protein Homology CDS 14957 15352 . - 0 ID=cds-WP_000208749.1;Parent=gene-SO06_RS23600;Dbxref=GenBank:WP_000208749.1;Name=WP_000208749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=SO06_RS23600;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 15363 16097 . - . ID=gene-SO06_RS23605;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=SO06_RS23605 NZ_MYDG01000034.1 Protein Homology CDS 15363 16097 . - 0 ID=cds-WP_000829509.1;Parent=gene-SO06_RS23605;Dbxref=GenBank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=SO06_RS23605;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 16090 17880 . - . ID=gene-SO06_RS23610;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=SO06_RS23610 NZ_MYDG01000034.1 Protein Homology CDS 16090 17880 . - 0 ID=cds-WP_001192954.1;Parent=gene-SO06_RS23610;Dbxref=GenBank:WP_001192954.1;Name=WP_001192954.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=SO06_RS23610;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192954.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 18203 19180 . + . ID=gene-SO06_RS23615;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=SO06_RS23615 NZ_MYDG01000034.1 Protein Homology CDS 18203 19180 . + 0 ID=cds-WP_023231652.1;Parent=gene-SO06_RS23615;Dbxref=GenBank:WP_023231652.1;Name=WP_023231652.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=SO06_RS23615;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_023231652.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 19406 20908 . + . ID=gene-SO06_RS23620;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=SO06_RS23620 NZ_MYDG01000034.1 Protein Homology CDS 19406 20908 . + 0 ID=cds-WP_023231651.1;Parent=gene-SO06_RS23620;Dbxref=GenBank:WP_023231651.1;Name=WP_023231651.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=SO06_RS23620;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_023231651.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 20973 21293 . + . ID=gene-SO06_RS23625;Name=SO06_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23625 NZ_MYDG01000034.1 Protein Homology CDS 20973 21293 . + 0 ID=cds-WP_001737341.1;Parent=gene-SO06_RS23625;Dbxref=GenBank:WP_001737341.1;Name=WP_001737341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682126.1;locus_tag=SO06_RS23625;product=hypothetical protein;protein_id=WP_001737341.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 21430 24756 . - . ID=gene-SO06_RS23630;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=SO06_RS23630 NZ_MYDG01000034.1 Protein Homology CDS 21430 24756 . - 0 ID=cds-WP_001236755.1;Parent=gene-SO06_RS23630;Dbxref=GenBank:WP_001236755.1;Name=WP_001236755.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=SO06_RS23630;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236755.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 24775 25743 . - . ID=gene-SO06_RS23635;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=SO06_RS23635 NZ_MYDG01000034.1 Protein Homology CDS 24775 25743 . - 0 ID=cds-WP_023231650.1;Parent=gene-SO06_RS23635;Dbxref=GenBank:WP_023231650.1;Name=WP_023231650.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=SO06_RS23635;product=archaetidylserine decarboxylase;protein_id=WP_023231650.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 25835 26887 . - . ID=gene-SO06_RS23640;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=SO06_RS23640 NZ_MYDG01000034.1 Protein Homology CDS 25835 26887 . - 0 ID=cds-WP_023231649.1;Parent=gene-SO06_RS23640;Dbxref=GenBank:WP_023231649.1;Name=WP_023231649.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=SO06_RS23640;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_023231649.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 26994 27539 . + . ID=gene-SO06_RS23645;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=SO06_RS23645 NZ_MYDG01000034.1 Protein Homology CDS 26994 27539 . + 0 ID=cds-WP_001271546.1;Parent=gene-SO06_RS23645;Dbxref=GenBank:WP_001271546.1;Name=WP_001271546.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=SO06_RS23645;product=oligoribonuclease;protein_id=WP_001271546.1;transl_table=11 NZ_MYDG01000034.1 RefSeq gene 27601 28341 . - . ID=gene-SO06_RS23650;Name=SO06_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23650 NZ_MYDG01000034.1 Protein Homology CDS 27601 28341 . - 0 ID=cds-WP_000727897.1;Parent=gene-SO06_RS23650;Dbxref=GenBank:WP_000727897.1;Name=WP_000727897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=SO06_RS23650;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000727897.1;transl_table=11 ##sequence-region NZ_MYDG01000035.1 1 28217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000035.1 RefSeq region 1 28217 . + . ID=NZ_MYDG01000035.1:1..28217;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000035.1 RefSeq gene 78 833 . - . ID=gene-SO06_RS23660;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=SO06_RS23660 NZ_MYDG01000035.1 Protein Homology CDS 78 833 . - 0 ID=cds-WP_000776787.1;Parent=gene-SO06_RS23660;Dbxref=GenBank:WP_000776787.1;Name=WP_000776787.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=SO06_RS23660;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776787.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 1122 2063 . + . ID=gene-SO06_RS23665;Name=SO06_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23665 NZ_MYDG01000035.1 Protein Homology CDS 1122 2063 . + 0 ID=cds-WP_000377772.1;Parent=gene-SO06_RS23665;Dbxref=GenBank:WP_000377772.1;Name=WP_000377772.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=SO06_RS23665;product=formate/nitrite transporter family protein;protein_id=WP_000377772.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 2139 2213 . + . ID=gene-SO06_RS23670;Name=SO06_RS23670;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS23670 NZ_MYDG01000035.1 tRNAscan-SE tRNA 2139 2213 . + . ID=rna-SO06_RS23670;Parent=gene-SO06_RS23670;anticodon=(pos:2172..2174);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS23670;product=tRNA-Arg NZ_MYDG01000035.1 tRNAscan-SE exon 2139 2213 . + . ID=exon-SO06_RS23670-1;Parent=rna-SO06_RS23670;anticodon=(pos:2172..2174);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS23670;product=tRNA-Arg NZ_MYDG01000035.1 RefSeq gene 2370 3308 . - . ID=gene-SO06_RS23675;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=SO06_RS23675 NZ_MYDG01000035.1 Protein Homology CDS 2370 3308 . - 0 ID=cds-WP_000716011.1;Parent=gene-SO06_RS23675;Dbxref=GenBank:WP_000716011.1;Name=WP_000716011.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=SO06_RS23675;product=omptin family outer membrane protease PgtE;protein_id=WP_000716011.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 3576 4823 . - . ID=gene-SO06_RS23680;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=SO06_RS23680 NZ_MYDG01000035.1 Protein Homology CDS 3576 4823 . - 0 ID=cds-WP_000930843.1;Parent=gene-SO06_RS23680;Dbxref=GenBank:WP_000930843.1;Name=WP_000930843.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=SO06_RS23680;product=two-component system response regulator PgtA;protein_id=WP_000930843.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 4813 6819 . - . ID=gene-SO06_RS23685;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=SO06_RS23685 NZ_MYDG01000035.1 Protein Homology CDS 4813 6819 . - 0 ID=cds-WP_000678493.1;Parent=gene-SO06_RS23685;Dbxref=GenBank:WP_000678493.1;Name=WP_000678493.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=SO06_RS23685;product=two-component system sensor histidine kinase PgtB;protein_id=WP_000678493.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 6816 8009 . - . ID=gene-SO06_RS23690;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=SO06_RS23690 NZ_MYDG01000035.1 Protein Homology CDS 6816 8009 . - 0 ID=cds-WP_000467983.1;Parent=gene-SO06_RS23690;Dbxref=GenBank:WP_000467983.1;Name=WP_000467983.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=SO06_RS23690;product=phosphoglycerate transport regulator PgtC;protein_id=WP_000467983.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 8445 9836 . + . ID=gene-SO06_RS23700;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=SO06_RS23700 NZ_MYDG01000035.1 Protein Homology CDS 8445 9836 . + 0 ID=cds-WP_000955747.1;Parent=gene-SO06_RS23700;Dbxref=GenBank:WP_000955747.1;Name=WP_000955747.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=SO06_RS23700;product=phosphoglycerate transporter PgtP;protein_id=WP_000955747.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 10111 10353 . - . ID=gene-SO06_RS23710;Name=SO06_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23710 NZ_MYDG01000035.1 Protein Homology CDS 10111 10353 . - 0 ID=cds-WP_000639889.1;Parent=gene-SO06_RS23710;Dbxref=GenBank:WP_000639889.1;Name=WP_000639889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=SO06_RS23710;product=YfdY family protein;protein_id=WP_000639889.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 10875 11795 . + . ID=gene-SO06_RS23715;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=SO06_RS23715 NZ_MYDG01000035.1 Protein Homology CDS 10875 11795 . + 0 ID=cds-WP_000484431.1;Parent=gene-SO06_RS23715;Dbxref=GenBank:WP_000484431.1;Name=WP_000484431.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=SO06_RS23715;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484431.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 12198 12269 . + . ID=gene-SO06_RS25195;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=SO06_RS25195 NZ_MYDG01000035.1 Protein Homology CDS 12198 12269 . + 0 ID=cds-WP_010723117.1;Parent=gene-SO06_RS25195;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=SO06_RS25195;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 12319 13557 . - . ID=gene-SO06_RS23720;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=SO06_RS23720 NZ_MYDG01000035.1 Protein Homology CDS 12319 13557 . - 0 ID=cds-WP_000763118.1;Parent=gene-SO06_RS23720;Dbxref=GenBank:WP_000763118.1;Name=WP_000763118.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=SO06_RS23720;product=alanine transaminase;protein_id=WP_000763118.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 14278 15243 . - . ID=gene-SO06_RS23725;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=SO06_RS23725 NZ_MYDG01000035.1 Protein Homology CDS 14278 15243 . - 0 ID=cds-WP_000170376.1;Parent=gene-SO06_RS23725;Dbxref=GenBank:WP_000170376.1;Name=WP_000170376.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=SO06_RS23725;product=glucokinase;protein_id=WP_000170376.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 15447 16682 . + . ID=gene-SO06_RS23730;Name=SO06_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23730 NZ_MYDG01000035.1 Protein Homology CDS 15447 16682 . + 0 ID=cds-WP_000468920.1;Parent=gene-SO06_RS23730;Dbxref=GenBank:WP_000468920.1;Name=WP_000468920.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=SO06_RS23730;product=ion channel protein;protein_id=WP_000468920.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 16702 18354 . - . ID=gene-SO06_RS23735;Name=SO06_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23735 NZ_MYDG01000035.1 Protein Homology CDS 16702 18354 . - 0 ID=cds-WP_023232131.1;Parent=gene-SO06_RS23735;Dbxref=GenBank:WP_023232131.1;Name=WP_023232131.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=SO06_RS23735;product=alpha-keto acid decarboxylase family protein;protein_id=WP_023232131.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 18534 19532 . + . ID=gene-SO06_RS23745;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=SO06_RS23745 NZ_MYDG01000035.1 Protein Homology CDS 18534 19532 . + 0 ID=cds-WP_020899059.1;Parent=gene-SO06_RS23745;Dbxref=GenBank:WP_020899059.1;Name=WP_020899059.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=SO06_RS23745;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_020899059.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 19646 19972 . + . ID=gene-SO06_RS23750;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=SO06_RS23750 NZ_MYDG01000035.1 Protein Homology CDS 19646 19972 . + 0 ID=cds-WP_000490091.1;Parent=gene-SO06_RS23750;Dbxref=GenBank:WP_000490091.1;Name=WP_000490091.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=SO06_RS23750;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490091.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 20033 21274 . - . ID=gene-SO06_RS23755;Name=SO06_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23755 NZ_MYDG01000035.1 Protein Homology CDS 20033 21274 . - 0 ID=cds-WP_000131734.1;Parent=gene-SO06_RS23755;Dbxref=GenBank:WP_000131734.1;Name=WP_000131734.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=SO06_RS23755;product=Nramp family divalent metal transporter;protein_id=WP_000131734.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 21267 21344 . - . ID=gene-SO06_RS25855;Name=SO06_RS25855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25855 NZ_MYDG01000035.1 Protein Homology CDS 21267 21344 . - 0 ID=cds-WP_418144572.1;Parent=gene-SO06_RS25855;Dbxref=GenBank:WP_418144572.1;Name=WP_418144572.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=SO06_RS25855;product=hypothetical protein;protein_id=WP_418144572.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 21617 22819 . + . ID=gene-SO06_RS23760;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=SO06_RS23760 NZ_MYDG01000035.1 Protein Homology CDS 21617 22819 . + 0 ID=cds-WP_000376347.1;Parent=gene-SO06_RS23760;Dbxref=GenBank:WP_000376347.1;Name=WP_000376347.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=SO06_RS23760;product=nucleoside permease NupC;protein_id=WP_000376347.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 22872 25061 . - . ID=gene-SO06_RS23765;Name=SO06_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23765 NZ_MYDG01000035.1 Protein Homology CDS 22872 25061 . - 0 ID=cds-WP_001112941.1;Parent=gene-SO06_RS23765;Dbxref=GenBank:WP_001112941.1;Name=WP_001112941.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=SO06_RS23765;product=EAL domain-containing protein;protein_id=WP_001112941.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 25252 25327 . - . ID=gene-SO06_RS23770;Name=SO06_RS23770;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS23770 NZ_MYDG01000035.1 tRNAscan-SE tRNA 25252 25327 . - . ID=rna-SO06_RS23770;Parent=gene-SO06_RS23770;anticodon=(pos:complement(25292..25294));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS23770;product=tRNA-Ala NZ_MYDG01000035.1 tRNAscan-SE exon 25252 25327 . - . ID=exon-SO06_RS23770-1;Parent=rna-SO06_RS23770;anticodon=(pos:complement(25292..25294));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS23770;product=tRNA-Ala NZ_MYDG01000035.1 RefSeq gene 25370 25445 . - . ID=gene-SO06_RS23775;Name=SO06_RS23775;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS23775 NZ_MYDG01000035.1 tRNAscan-SE tRNA 25370 25445 . - . ID=rna-SO06_RS23775;Parent=gene-SO06_RS23775;anticodon=(pos:complement(25410..25412));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS23775;product=tRNA-Ala NZ_MYDG01000035.1 tRNAscan-SE exon 25370 25445 . - . ID=exon-SO06_RS23775-1;Parent=rna-SO06_RS23775;anticodon=(pos:complement(25410..25412));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS23775;product=tRNA-Ala NZ_MYDG01000035.1 RefSeq gene 25667 26029 . + . ID=gene-SO06_RS23785;Name=SO06_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23785 NZ_MYDG01000035.1 Protein Homology CDS 25667 26029 . + 0 ID=cds-WP_000472034.1;Parent=gene-SO06_RS23785;Dbxref=GenBank:WP_000472034.1;Name=WP_000472034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=SO06_RS23785;product=MerR family transcriptional regulator;protein_id=WP_000472034.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 26031 26423 . + . ID=gene-SO06_RS23790;Name=SO06_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23790 NZ_MYDG01000035.1 Protein Homology CDS 26031 26423 . + 0 ID=cds-WP_000826514.1;Parent=gene-SO06_RS23790;Dbxref=GenBank:WP_000826514.1;Name=WP_000826514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=SO06_RS23790;product=MerR family transcriptional regulator;protein_id=WP_000826514.1;transl_table=11 NZ_MYDG01000035.1 RefSeq gene 26477 27892 . - . ID=gene-SO06_RS23795;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=SO06_RS23795 NZ_MYDG01000035.1 Protein Homology CDS 26477 27892 . - 0 ID=cds-WP_000695623.1;Parent=gene-SO06_RS23795;Dbxref=GenBank:WP_000695623.1;Name=WP_000695623.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=SO06_RS23795;product=glutamate--tRNA ligase;protein_id=WP_000695623.1;transl_table=11 ##sequence-region NZ_MYDG01000036.1 1 26347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000036.1 RefSeq region 1 26347 . + . ID=NZ_MYDG01000036.1:1..26347;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000036.1 RefSeq gene 187 339 . - . ID=gene-SO06_RS25325;Name=SO06_RS25325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25325 NZ_MYDG01000036.1 GeneMarkS-2+ CDS 187 339 . - 0 ID=cds-WP_023232596.1;Parent=gene-SO06_RS25325;Dbxref=GenBank:WP_023232596.1;Name=WP_023232596.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS25325;product=hypothetical protein;protein_id=WP_023232596.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 453 1007 . + . ID=gene-SO06_RS23805;Name=SO06_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23805 NZ_MYDG01000036.1 Protein Homology CDS 453 1007 . + 0 ID=cds-WP_001285635.1;Parent=gene-SO06_RS23805;Dbxref=GenBank:WP_001285635.1;Name=WP_001285635.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=SO06_RS23805;product=gamma carbonic anhydrase family protein;protein_id=WP_001285635.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 983 1240 . - . ID=gene-SO06_RS23810;Name=SO06_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23810 NZ_MYDG01000036.1 Protein Homology CDS 983 1240 . - 0 ID=cds-WP_001070575.1;Parent=gene-SO06_RS23810;Dbxref=GenBank:WP_001070575.1;Name=WP_001070575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=SO06_RS23810;product=DUF1488 domain-containing protein;protein_id=WP_001070575.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 1237 2055 . - . ID=gene-SO06_RS23815;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=SO06_RS23815 NZ_MYDG01000036.1 Protein Homology CDS 1237 2055 . - 0 ID=cds-WP_000451202.1;Parent=gene-SO06_RS23815;Dbxref=GenBank:WP_000451202.1;Name=WP_000451202.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=SO06_RS23815;product=shikimate dehydrogenase;protein_id=WP_000451202.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 2060 2632 . - . ID=gene-SO06_RS23820;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=SO06_RS23820 NZ_MYDG01000036.1 Protein Homology CDS 2060 2632 . - 0 ID=cds-WP_001063613.1;Parent=gene-SO06_RS23820;Dbxref=GenBank:WP_001063613.1;Name=WP_001063613.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=SO06_RS23820;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001063613.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 2637 3179 . - . ID=gene-SO06_RS23825;Name=SO06_RS23825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23825 NZ_MYDG01000036.1 Protein Homology CDS 2637 3179 . - 0 ID=cds-WP_001129708.1;Parent=gene-SO06_RS23825;Dbxref=GenBank:WP_001129708.1;Name=WP_001129708.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=SO06_RS23825;product=DNA topoisomerase family protein;protein_id=WP_001129708.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 3206 3679 . - . ID=gene-SO06_RS23830;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=SO06_RS23830 NZ_MYDG01000036.1 Protein Homology CDS 3206 3679 . - 0 ID=cds-WP_010835147.1;Parent=gene-SO06_RS23830;Dbxref=GenBank:WP_010835147.1;Name=WP_010835147.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=SO06_RS23830;product=DUF494 family protein Smg;protein_id=WP_010835147.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 3651 4775 . - . ID=gene-SO06_RS23835;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=SO06_RS23835 NZ_MYDG01000036.1 Protein Homology CDS 3651 4775 . - 0 ID=cds-WP_000124526.1;Parent=gene-SO06_RS23835;Dbxref=GenBank:WP_000124526.1;Name=WP_000124526.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=SO06_RS23835;product=DNA-protecting protein DprA;protein_id=WP_000124526.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 4907 5416 . + . ID=gene-SO06_RS23840;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=SO06_RS23840 NZ_MYDG01000036.1 Protein Homology CDS 4907 5416 . + 0 ID=cds-WP_000114987.1;Parent=gene-SO06_RS23840;Dbxref=GenBank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=SO06_RS23840;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 5432 6379 . + . ID=gene-SO06_RS23845;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=SO06_RS23845 NZ_MYDG01000036.1 Protein Homology CDS 5432 6379 . + 0 ID=cds-WP_001285164.1;Parent=gene-SO06_RS23845;Dbxref=GenBank:WP_001285164.1;Name=WP_001285164.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=SO06_RS23845;product=methionyl-tRNA formyltransferase;protein_id=WP_001285164.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 6431 7720 . + . ID=gene-SO06_RS23850;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=SO06_RS23850 NZ_MYDG01000036.1 Protein Homology CDS 6431 7720 . + 0 ID=cds-WP_023232597.1;Parent=gene-SO06_RS23850;Dbxref=GenBank:WP_023232597.1;Name=WP_023232597.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=SO06_RS23850;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_023232597.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 7742 9118 . + . ID=gene-SO06_RS23855;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=SO06_RS23855 NZ_MYDG01000036.1 Protein Homology CDS 7742 9118 . + 0 ID=cds-WP_000691374.1;Parent=gene-SO06_RS23855;Dbxref=GenBank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=SO06_RS23855;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 9261 9674 . + . ID=gene-SO06_RS23860;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=SO06_RS23860 NZ_MYDG01000036.1 Protein Homology CDS 9261 9674 . + 0 ID=cds-WP_000008119.1;Parent=gene-SO06_RS23860;Dbxref=GenBank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=SO06_RS23860;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11 NZ_MYDG01000036.1 RefSeq pseudogene 9676 9879 . - . ID=gene-SO06_RS23865;Name=SO06_RS23865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS23865;partial=true;pseudo=true;start_range=.,9676 NZ_MYDG01000036.1 Protein Homology CDS 9676 9879 . - 0 ID=cds-SO06_RS23865;Parent=gene-SO06_RS23865;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=SO06_RS23865;partial=true;product=alternative ribosome-rescue factor A;pseudo=true;start_range=.,9676;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 9937 10362 . - . ID=gene-SO06_RS23870;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=SO06_RS23870 NZ_MYDG01000036.1 Protein Homology CDS 9937 10362 . - 0 ID=cds-WP_000285585.1;Parent=gene-SO06_RS23870;Dbxref=GenBank:WP_000285585.1;Name=WP_000285585.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=SO06_RS23870;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285585.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 10373 10741 . - . ID=gene-SO06_RS23875;Name=SO06_RS23875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23875 NZ_MYDG01000036.1 Protein Homology CDS 10373 10741 . - 0 ID=cds-WP_023232598.1;Parent=gene-SO06_RS23875;Dbxref=GenBank:WP_023232598.1;Name=WP_023232598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=SO06_RS23875;product=DUF1992 domain-containing protein;protein_id=WP_023232598.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 10849 11232 . - . ID=gene-SO06_RS23880;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=SO06_RS23880 NZ_MYDG01000036.1 Protein Homology CDS 10849 11232 . - 0 ID=cds-WP_001216370.1;Parent=gene-SO06_RS23880;Dbxref=GenBank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=SO06_RS23880;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 11273 12262 . - . ID=gene-SO06_RS23885;Name=SO06_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS23885 NZ_MYDG01000036.1 Protein Homology CDS 11273 12262 . - 0 ID=cds-WP_001162094.1;Parent=gene-SO06_RS23885;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=SO06_RS23885;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 12288 12908 . - . ID=gene-SO06_RS23890;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=SO06_RS23890 NZ_MYDG01000036.1 Protein Homology CDS 12288 12908 . - 0 ID=cds-WP_000135226.1;Parent=gene-SO06_RS23890;Dbxref=GenBank:WP_000135226.1;Name=WP_000135226.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=SO06_RS23890;product=30S ribosomal protein S4;protein_id=WP_000135226.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 12942 13331 . - . ID=gene-SO06_RS23895;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=SO06_RS23895 NZ_MYDG01000036.1 Protein Homology CDS 12942 13331 . - 0 ID=cds-WP_001029758.1;Parent=gene-SO06_RS23895;Dbxref=GenBank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=SO06_RS23895;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 13348 13704 . - . ID=gene-SO06_RS23900;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=SO06_RS23900 NZ_MYDG01000036.1 Protein Homology CDS 13348 13704 . - 0 ID=cds-WP_000090780.1;Parent=gene-SO06_RS23900;Dbxref=GenBank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=SO06_RS23900;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 13851 13967 . - . ID=gene-SO06_RS23905;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=SO06_RS23905 NZ_MYDG01000036.1 Protein Homology CDS 13851 13967 . - 0 ID=cds-WP_000868187.1;Parent=gene-SO06_RS23905;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=SO06_RS23905;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 13999 15330 . - . ID=gene-SO06_RS23910;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=SO06_RS23910 NZ_MYDG01000036.1 Protein Homology CDS 13999 15330 . - 0 ID=cds-WP_001118864.1;Parent=gene-SO06_RS23910;Dbxref=GenBank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=SO06_RS23910;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 15338 15772 . - . ID=gene-SO06_RS23915;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=SO06_RS23915 NZ_MYDG01000036.1 Protein Homology CDS 15338 15772 . - 0 ID=cds-WP_001238917.1;Parent=gene-SO06_RS23915;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=SO06_RS23915;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 15776 15955 . - . ID=gene-SO06_RS23920;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=SO06_RS23920 NZ_MYDG01000036.1 Protein Homology CDS 15776 15955 . - 0 ID=cds-WP_001140434.1;Parent=gene-SO06_RS23920;Dbxref=GenBank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=SO06_RS23920;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 15959 16462 . - . ID=gene-SO06_RS23925;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=SO06_RS23925 NZ_MYDG01000036.1 Protein Homology CDS 15959 16462 . - 0 ID=cds-WP_000940121.1;Parent=gene-SO06_RS23925;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=SO06_RS23925;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 16477 16830 . - . ID=gene-SO06_RS23930;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=SO06_RS23930 NZ_MYDG01000036.1 Protein Homology CDS 16477 16830 . - 0 ID=cds-WP_000358956.1;Parent=gene-SO06_RS23930;Dbxref=GenBank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=SO06_RS23930;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 16840 17373 . - . ID=gene-SO06_RS23935;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=SO06_RS23935 NZ_MYDG01000036.1 Protein Homology CDS 16840 17373 . - 0 ID=cds-WP_000091939.1;Parent=gene-SO06_RS23935;Dbxref=GenBank:WP_000091939.1;Name=WP_000091939.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=SO06_RS23935;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 17386 17778 . - . ID=gene-SO06_RS23940;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=SO06_RS23940 NZ_MYDG01000036.1 Protein Homology CDS 17386 17778 . - 0 ID=cds-WP_000062611.1;Parent=gene-SO06_RS23940;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=SO06_RS23940;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 17812 18117 . - . ID=gene-SO06_RS23945;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=SO06_RS23945 NZ_MYDG01000036.1 Protein Homology CDS 17812 18117 . - 0 ID=cds-WP_001118932.1;Parent=gene-SO06_RS23945;Dbxref=GenBank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=SO06_RS23945;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 18132 18671 . - . ID=gene-SO06_RS23950;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=SO06_RS23950 NZ_MYDG01000036.1 Protein Homology CDS 18132 18671 . - 0 ID=cds-WP_001096206.1;Parent=gene-SO06_RS23950;Dbxref=GenBank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=SO06_RS23950;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 18686 19000 . - . ID=gene-SO06_RS23955;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=SO06_RS23955 NZ_MYDG01000036.1 Protein Homology CDS 18686 19000 . - 0 ID=cds-WP_000729185.1;Parent=gene-SO06_RS23955;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=SO06_RS23955;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 19011 19382 . - . ID=gene-SO06_RS23960;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=SO06_RS23960 NZ_MYDG01000036.1 Protein Homology CDS 19011 19382 . - 0 ID=cds-WP_000613954.1;Parent=gene-SO06_RS23960;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=SO06_RS23960;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 19546 19800 . - . ID=gene-SO06_RS23965;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=SO06_RS23965 NZ_MYDG01000036.1 Protein Homology CDS 19546 19800 . - 0 ID=cds-WP_000130101.1;Parent=gene-SO06_RS23965;Dbxref=GenBank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=SO06_RS23965;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 19800 19991 . - . ID=gene-SO06_RS23970;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=SO06_RS23970 NZ_MYDG01000036.1 Protein Homology CDS 19800 19991 . - 0 ID=cds-WP_000644742.1;Parent=gene-SO06_RS23970;Dbxref=GenBank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=SO06_RS23970;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 19991 20401 . - . ID=gene-SO06_RS23975;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=SO06_RS23975 NZ_MYDG01000036.1 Protein Homology CDS 19991 20401 . - 0 ID=cds-WP_000941208.1;Parent=gene-SO06_RS23975;Dbxref=GenBank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=SO06_RS23975;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 20414 21115 . - . ID=gene-SO06_RS23980;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=SO06_RS23980 NZ_MYDG01000036.1 Protein Homology CDS 20414 21115 . - 0 ID=cds-WP_000529945.1;Parent=gene-SO06_RS23980;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=SO06_RS23980;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 21133 21465 . - . ID=gene-SO06_RS23985;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=SO06_RS23985 NZ_MYDG01000036.1 Protein Homology CDS 21133 21465 . - 0 ID=cds-WP_000447529.1;Parent=gene-SO06_RS23985;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=SO06_RS23985;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 21480 21758 . - . ID=gene-SO06_RS23990;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=SO06_RS23990 NZ_MYDG01000036.1 Protein Homology CDS 21480 21758 . - 0 ID=cds-WP_001138115.1;Parent=gene-SO06_RS23990;Dbxref=GenBank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=SO06_RS23990;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 21775 22596 . - . ID=gene-SO06_RS23995;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=SO06_RS23995 NZ_MYDG01000036.1 Protein Homology CDS 21775 22596 . - 0 ID=cds-WP_000301869.1;Parent=gene-SO06_RS23995;Dbxref=GenBank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=SO06_RS23995;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 22614 22916 . - . ID=gene-SO06_RS24000;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=SO06_RS24000 NZ_MYDG01000036.1 Protein Homology CDS 22614 22916 . - 0 ID=cds-WP_000617546.1;Parent=gene-SO06_RS24000;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=SO06_RS24000;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 22913 23518 . - . ID=gene-SO06_RS24005;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=SO06_RS24005 NZ_MYDG01000036.1 Protein Homology CDS 22913 23518 . - 0 ID=cds-WP_000424395.1;Parent=gene-SO06_RS24005;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=SO06_RS24005;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 23529 24158 . - . ID=gene-SO06_RS24010;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=SO06_RS24010 NZ_MYDG01000036.1 Protein Homology CDS 23529 24158 . - 0 ID=cds-WP_000579838.1;Parent=gene-SO06_RS24010;Dbxref=GenBank:WP_000579838.1;Name=WP_000579838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=SO06_RS24010;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 24191 24502 . - . ID=gene-SO06_RS24015;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=SO06_RS24015 NZ_MYDG01000036.1 Protein Homology CDS 24191 24502 . - 0 ID=cds-WP_001181005.1;Parent=gene-SO06_RS24015;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=SO06_RS24015;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 24882 25349 . + . ID=gene-SO06_RS24025;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=SO06_RS24025 NZ_MYDG01000036.1 Protein Homology CDS 24882 25349 . + 0 ID=cds-WP_023232599.1;Parent=gene-SO06_RS24025;Dbxref=GenBank:WP_023232599.1;Name=WP_023232599.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=SO06_RS24025;product=prepilin peptidase;protein_id=WP_023232599.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 25346 25822 . - . ID=gene-SO06_RS24030;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=SO06_RS24030 NZ_MYDG01000036.1 Protein Homology CDS 25346 25822 . - 0 ID=cds-WP_000675530.1;Parent=gene-SO06_RS24030;Dbxref=GenBank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=SO06_RS24030;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 25895 26089 . - . ID=gene-SO06_RS24035;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=SO06_RS24035 NZ_MYDG01000036.1 Protein Homology CDS 25895 26089 . - 0 ID=cds-WP_000289082.1;Parent=gene-SO06_RS24035;Dbxref=GenBank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=SO06_RS24035;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11 NZ_MYDG01000036.1 RefSeq gene 26274 26347 . - . ID=gene-SO06_RS24050;Name=SO06_RS24050;end_range=26347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24050;partial=true NZ_MYDG01000036.1 Protein Homology CDS 26274 26347 . - 2 ID=cds-WP_001680644.1-2;Parent=gene-SO06_RS24050;Dbxref=GenBank:WP_001680644.1;Name=WP_001680644.1;end_range=26347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=SO06_RS24050;partial=true;product=hypothetical protein;protein_id=WP_001680644.1;transl_table=11 ##sequence-region NZ_MYDG01000037.1 1 26305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000037.1 RefSeq region 1 26305 . + . ID=NZ_MYDG01000037.1:1..26305;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000037.1 RefSeq gene 274 465 . - . ID=gene-SO06_RS24065;Name=SO06_RS24065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24065 NZ_MYDG01000037.1 Protein Homology CDS 274 465 . - 0 ID=cds-WP_001027500.1;Parent=gene-SO06_RS24065;Dbxref=GenBank:WP_001027500.1;Name=WP_001027500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=SO06_RS24065;product=hypothetical protein;protein_id=WP_001027500.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 462 884 . - . ID=gene-SO06_RS24070;Name=SO06_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24070 NZ_MYDG01000037.1 Protein Homology CDS 462 884 . - 0 ID=cds-WP_000271725.1;Parent=gene-SO06_RS24070;Dbxref=GenBank:WP_000271725.1;Name=WP_000271725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052650.1;locus_tag=SO06_RS24070;product=DUF1380 family protein;protein_id=WP_000271725.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 931 1356 . - . ID=gene-SO06_RS24075;Name=SO06_RS24075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24075 NZ_MYDG01000037.1 Protein Homology CDS 931 1356 . - 0 ID=cds-WP_001198928.1;Parent=gene-SO06_RS24075;Dbxref=GenBank:WP_001198928.1;Name=WP_001198928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=SO06_RS24075;product=antirestriction protein;protein_id=WP_001198928.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 1774 2544 . - . ID=gene-SO06_RS25200;Name=SO06_RS25200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25200 NZ_MYDG01000037.1 Protein Homology CDS 1774 2544 . - 0 ID=cds-WP_024133193.1;Parent=gene-SO06_RS25200;Dbxref=GenBank:WP_024133193.1;Name=WP_024133193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523829.1;locus_tag=SO06_RS25200;product=hypothetical protein;protein_id=WP_024133193.1;transl_table=11 NZ_MYDG01000037.1 RefSeq pseudogene 2595 3081 . - . ID=gene-SO06_RS24090;Name=SO06_RS24090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS24090;pseudo=true NZ_MYDG01000037.1 Protein Homology CDS 2595 3081 . - 0 ID=cds-SO06_RS24090;Parent=gene-SO06_RS24090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052646.1;locus_tag=SO06_RS24090;product=DUF1380 family protein;pseudo=true;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 3041 3262 . - . ID=gene-SO06_RS24095;Name=SO06_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24095 NZ_MYDG01000037.1 Protein Homology CDS 3041 3262 . - 0 ID=cds-WP_001104887.1;Parent=gene-SO06_RS24095;Dbxref=GenBank:WP_001104887.1;Name=WP_001104887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858332.1;locus_tag=SO06_RS24095;product=hypothetical protein;protein_id=WP_001104887.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 3263 3946 . - . ID=gene-SO06_RS24100;Name=SO06_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24100 NZ_MYDG01000037.1 Protein Homology CDS 3263 3946 . - 0 ID=cds-WP_000086178.1;Parent=gene-SO06_RS24100;Dbxref=GenBank:WP_000086178.1;Name=WP_000086178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858331.2;locus_tag=SO06_RS24100;product=DNA methylase;protein_id=WP_000086178.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 4023 4334 . - . ID=gene-SO06_RS25205;Name=SO06_RS25205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25205 NZ_MYDG01000037.1 Protein Homology CDS 4023 4334 . - 0 ID=cds-WP_010891263.1;Parent=gene-SO06_RS25205;Dbxref=GenBank:WP_010891263.1;Name=WP_010891263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858330.2;locus_tag=SO06_RS25205;product=hypothetical protein;protein_id=WP_010891263.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 4331 5233 . - . ID=gene-SO06_RS24105;Name=SO06_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24105 NZ_MYDG01000037.1 Protein Homology CDS 4331 5233 . - 0 ID=cds-WP_000273918.1;Parent=gene-SO06_RS24105;Dbxref=GenBank:WP_000273918.1;Name=WP_000273918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052643.1;locus_tag=SO06_RS24105;product=DUF1281 domain-containing protein;protein_id=WP_000273918.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 5651 5899 . + . ID=gene-SO06_RS24115;Name=SO06_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24115 NZ_MYDG01000037.1 Protein Homology CDS 5651 5899 . + 0 ID=cds-WP_000618110.1;Parent=gene-SO06_RS24115;Dbxref=GenBank:WP_000618110.1;Name=WP_000618110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697964.1;locus_tag=SO06_RS24115;product=DinI-like family protein;protein_id=WP_000618110.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 5896 6333 . + . ID=gene-SO06_RS24120;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=SO06_RS24120 NZ_MYDG01000037.1 Protein Homology CDS 5896 6333 . + 0 ID=cds-WP_000109071.1;Parent=gene-SO06_RS24120;Dbxref=GenBank:WP_000109071.1;Name=WP_000109071.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536590.1;locus_tag=SO06_RS24120;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000109071.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 6333 7607 . + . ID=gene-SO06_RS24125;Name=SO06_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24125 NZ_MYDG01000037.1 Protein Homology CDS 6333 7607 . + 0 ID=cds-WP_000457493.1;Parent=gene-SO06_RS24125;Dbxref=GenBank:WP_000457493.1;Name=WP_000457493.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001566943.1;locus_tag=SO06_RS24125;product=Y-family DNA polymerase;protein_id=WP_000457493.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 7609 8025 . - . ID=gene-SO06_RS24130;Name=SO06_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24130 NZ_MYDG01000037.1 Protein Homology CDS 7609 8025 . - 0 ID=cds-WP_001278818.1;Parent=gene-SO06_RS24130;Dbxref=GenBank:WP_001278818.1;Name=WP_001278818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278810.1;locus_tag=SO06_RS24130;product=plasmid partitioning/stability family protein;protein_id=WP_001278818.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 8018 8998 . - . ID=gene-SO06_RS24135;Name=SO06_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24135 NZ_MYDG01000037.1 Protein Homology CDS 8018 8998 . - 0 ID=cds-WP_000688514.1;Parent=gene-SO06_RS24135;Dbxref=GenBank:WP_000688514.1;Name=WP_000688514.1;Ontology_term=GO:0030541,GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;go_process=plasmid partitioning|0030541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401593.1;locus_tag=SO06_RS24135;product=plasmid segregation protein ParM;protein_id=WP_000688514.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 9412 9720 . - . ID=gene-SO06_RS24140;Name=SO06_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24140 NZ_MYDG01000037.1 Protein Homology CDS 9412 9720 . - 0 ID=cds-WP_000030199.1;Parent=gene-SO06_RS24140;Dbxref=GenBank:WP_000030199.1;Name=WP_000030199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030202.1;locus_tag=SO06_RS24140;product=hypothetical protein;protein_id=WP_000030199.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 9807 10451 . - . ID=gene-SO06_RS24145;Name=SO06_RS24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24145 NZ_MYDG01000037.1 Protein Homology CDS 9807 10451 . - 0 ID=cds-WP_001144036.1;Parent=gene-SO06_RS24145;Dbxref=GenBank:WP_001144036.1;Name=WP_001144036.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001144037.1;locus_tag=SO06_RS24145;product=ParA family protein;protein_id=WP_001144036.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 10631 11410 . - . ID=gene-SO06_RS24150;Name=SO06_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24150 NZ_MYDG01000037.1 Protein Homology CDS 10631 11410 . - 0 ID=cds-WP_001164198.1;Parent=gene-SO06_RS24150;Dbxref=GenBank:WP_001164198.1;Name=WP_001164198.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001164196.1;locus_tag=SO06_RS24150;product=site-specific integrase;protein_id=WP_001164198.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 11412 11825 . - . ID=gene-SO06_RS24155;Name=SO06_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24155 NZ_MYDG01000037.1 Protein Homology CDS 11412 11825 . - 0 ID=cds-WP_000465036.1;Parent=gene-SO06_RS24155;Dbxref=GenBank:WP_000465036.1;Name=WP_000465036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536595.1;locus_tag=SO06_RS24155;product=hypothetical protein;protein_id=WP_000465036.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 12357 13283 . + . ID=gene-SO06_RS24160;Name=SO06_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24160 NZ_MYDG01000037.1 Protein Homology CDS 12357 13283 . + 0 ID=cds-WP_001290416.1;Parent=gene-SO06_RS24160;Dbxref=GenBank:WP_001290416.1;Name=WP_001290416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290416.1;locus_tag=SO06_RS24160;product=hypothetical protein;protein_id=WP_001290416.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 13328 13582 . + . ID=gene-SO06_RS24165;Name=SO06_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24165 NZ_MYDG01000037.1 Protein Homology CDS 13328 13582 . + 0 ID=cds-WP_000678527.1;Parent=gene-SO06_RS24165;Dbxref=GenBank:WP_000678527.1;Name=WP_000678527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000678527.1;locus_tag=SO06_RS24165;product=hypothetical protein;protein_id=WP_000678527.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 14081 14425 . + . ID=gene-SO06_RS24170;Name=SO06_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24170 NZ_MYDG01000037.1 Protein Homology CDS 14081 14425 . + 0 ID=cds-WP_000793307.1;Parent=gene-SO06_RS24170;Dbxref=GenBank:WP_000793307.1;Name=WP_000793307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793307.1;locus_tag=SO06_RS24170;product=hypothetical protein;protein_id=WP_000793307.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 14601 15602 . - . ID=gene-SO06_RS24175;Name=SO06_RS24175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24175 NZ_MYDG01000037.1 Protein Homology CDS 14601 15602 . - 0 ID=cds-WP_000774874.1;Parent=gene-SO06_RS24175;Dbxref=GenBank:WP_000774874.1;Name=WP_000774874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000785695.1;locus_tag=SO06_RS24175;product=DUF4238 domain-containing protein;protein_id=WP_000774874.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 15954 16208 . + . ID=gene-SO06_RS24180;Name=SO06_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24180 NZ_MYDG01000037.1 Protein Homology CDS 15954 16208 . + 0 ID=cds-WP_000343103.1;Parent=gene-SO06_RS24180;Dbxref=GenBank:WP_000343103.1;Name=WP_000343103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343103.1;locus_tag=SO06_RS24180;product=hypothetical protein;protein_id=WP_000343103.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 16208 16798 . + . ID=gene-SO06_RS24185;Name=SO06_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24185 NZ_MYDG01000037.1 Protein Homology CDS 16208 16798 . + 0 ID=cds-WP_000194550.1;Parent=gene-SO06_RS24185;Dbxref=GenBank:WP_000194550.1;Name=WP_000194550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001545742.1;locus_tag=SO06_RS24185;product=hypothetical protein;protein_id=WP_000194550.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 16816 17163 . - . ID=gene-SO06_RS24190;Name=SO06_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24190 NZ_MYDG01000037.1 Protein Homology CDS 16816 17163 . - 0 ID=cds-WP_000142436.1;Parent=gene-SO06_RS24190;Dbxref=GenBank:WP_000142436.1;Name=WP_000142436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563283.1;locus_tag=SO06_RS24190;product=DUF6404 family protein;protein_id=WP_000142436.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 17282 17629 . + . ID=gene-SO06_RS24195;Name=SO06_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24195 NZ_MYDG01000037.1 Protein Homology CDS 17282 17629 . + 0 ID=cds-WP_000762570.1;Parent=gene-SO06_RS24195;Dbxref=GenBank:WP_000762570.1;Name=WP_000762570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762570.1;locus_tag=SO06_RS24195;product=colicin 1B immunity protein;protein_id=WP_000762570.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 17647 19527 . - . ID=gene-SO06_RS24200;Name=SO06_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24200 NZ_MYDG01000037.1 Protein Homology CDS 17647 19527 . - 0 ID=cds-WP_001283341.1;Parent=gene-SO06_RS24200;Dbxref=GenBank:WP_001283341.1;Name=WP_001283341.1;Ontology_term=GO:0019835,GO:0031640,GO:0050829,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cytolysis|0019835||IEA,killing of cells of another organism|0031640||IEA,defense response to Gram-negative bacterium|0050829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610315.1;locus_tag=SO06_RS24200;product=colicin Ia central receptor-binding domain-containing protein;protein_id=WP_001283341.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 19806 21152 . - . ID=gene-SO06_RS24205;Name=yagA;gbkey=Gene;gene=yagA;gene_biotype=protein_coding;locus_tag=SO06_RS24205 NZ_MYDG01000037.1 Protein Homology CDS 19806 21152 . - 0 ID=cds-WP_001132032.1;Parent=gene-SO06_RS24205;Dbxref=GenBank:WP_001132032.1;Name=WP_001132032.1;gbkey=CDS;gene=yagA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001132032.1;locus_tag=SO06_RS24205;product=protein YagA;protein_id=WP_001132032.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 21506 22108 . + . ID=gene-SO06_RS24215;Name=SO06_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24215 NZ_MYDG01000037.1 Protein Homology CDS 21506 22108 . + 0 ID=cds-WP_000517695.1;Parent=gene-SO06_RS24215;Dbxref=GenBank:WP_000517695.1;Name=WP_000517695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697843.1;locus_tag=SO06_RS24215;product=ProQ/FINO family protein;protein_id=WP_000517695.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 22164 22658 . + . ID=gene-SO06_RS24220;Name=SO06_RS24220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24220 NZ_MYDG01000037.1 Protein Homology CDS 22164 22658 . + 0 ID=cds-WP_001459505.1;Parent=gene-SO06_RS24220;Dbxref=GenBank:WP_001459505.1;Name=WP_001459505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001582574.1;locus_tag=SO06_RS24220;product=hypothetical protein;protein_id=WP_001459505.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 22658 22924 . + . ID=gene-SO06_RS24225;Name=SO06_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24225 NZ_MYDG01000037.1 Protein Homology CDS 22658 22924 . + 0 ID=cds-WP_000955263.1;Parent=gene-SO06_RS24225;Dbxref=GenBank:WP_000955263.1;Name=WP_000955263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627831.1;locus_tag=SO06_RS24225;product=hypothetical protein;protein_id=WP_000955263.1;transl_table=11 NZ_MYDG01000037.1 RefSeq gene 23401 23892 . - . ID=gene-SO06_RS24235;Name=SO06_RS24235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24235 NZ_MYDG01000037.1 Protein Homology CDS 23401 23892 . - 0 ID=cds-WP_000068661.1;Parent=gene-SO06_RS24235;Dbxref=GenBank:WP_000068661.1;Name=WP_000068661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196892.1;locus_tag=SO06_RS24235;product=hypothetical protein;protein_id=WP_000068661.1;transl_table=11 NZ_MYDG01000037.1 RefSeq pseudogene 23826 26237 . - . ID=gene-SO06_RS24240;Name=SO06_RS24240;end_range=26237,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS24240;partial=true;pseudo=true NZ_MYDG01000037.1 Protein Homology CDS 23826 26237 . - 0 ID=cds-SO06_RS24240;Parent=gene-SO06_RS24240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=26237,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138064.1;locus_tag=SO06_RS24240;partial=true;product=Tn3-like element TnAs3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_MYDG01000038.1 1 15112 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000038.1 RefSeq region 1 15112 . + . ID=NZ_MYDG01000038.1:1..15112;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000038.1 RefSeq gene 198 1961 . + . ID=gene-SO06_RS24245;Name=SO06_RS24245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24245 NZ_MYDG01000038.1 Protein Homology CDS 198 1961 . + 0 ID=cds-WP_000524171.1;Parent=gene-SO06_RS24245;Dbxref=GenBank:WP_000524171.1;Name=WP_000524171.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=SO06_RS24245;product=chitinase;protein_id=WP_000524171.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 2037 4178 . + . ID=gene-SO06_RS24250;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=SO06_RS24250 NZ_MYDG01000038.1 Protein Homology CDS 2037 4178 . + 0 ID=cds-WP_023231607.1;Parent=gene-SO06_RS24250;Dbxref=GenBank:WP_023231607.1;Name=WP_023231607.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=SO06_RS24250;product=lysine decarboxylase LdcC;protein_id=WP_023231607.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 4234 4623 . + . ID=gene-SO06_RS24255;Name=SO06_RS24255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24255 NZ_MYDG01000038.1 Protein Homology CDS 4234 4623 . + 0 ID=cds-WP_000901088.1;Parent=gene-SO06_RS24255;Dbxref=GenBank:WP_000901088.1;Name=WP_000901088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=SO06_RS24255;product=VOC family protein;protein_id=WP_000901088.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 4686 5978 . + . ID=gene-SO06_RS24260;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=SO06_RS24260 NZ_MYDG01000038.1 Protein Homology CDS 4686 5978 . + 0 ID=cds-WP_048348919.1;Parent=gene-SO06_RS24260;Dbxref=GenBank:WP_048348919.1;Name=WP_048348919.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=SO06_RS24260;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_048348919.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 6062 6322 . - . ID=gene-SO06_RS24265;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=SO06_RS24265 NZ_MYDG01000038.1 Protein Homology CDS 6062 6322 . - 0 ID=cds-WP_000062330.1;Parent=gene-SO06_RS24265;Dbxref=GenBank:WP_000062330.1;Name=WP_000062330.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=SO06_RS24265;product=Rho-binding antiterminator;protein_id=WP_000062330.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 6309 6509 . - . ID=gene-SO06_RS24270;Name=SO06_RS24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24270 NZ_MYDG01000038.1 Protein Homology CDS 6309 6509 . - 0 ID=cds-WP_001518678.1;Parent=gene-SO06_RS24270;Dbxref=GenBank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=SO06_RS24270;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 6707 7252 . + . ID=gene-SO06_RS24275;Name=SO06_RS24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24275 NZ_MYDG01000038.1 Protein Homology CDS 6707 7252 . + 0 ID=cds-WP_001185319.1;Parent=gene-SO06_RS24275;Dbxref=GenBank:WP_001185319.1;Name=WP_001185319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=SO06_RS24275;product=YaeQ family protein;protein_id=WP_001185319.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 7249 7671 . + . ID=gene-SO06_RS24280;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=SO06_RS24280 NZ_MYDG01000038.1 Protein Homology CDS 7249 7671 . + 0 ID=cds-WP_000560527.1;Parent=gene-SO06_RS24280;Dbxref=GenBank:WP_000560527.1;Name=WP_000560527.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=SO06_RS24280;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560527.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 7703 8404 . + . ID=gene-SO06_RS24285;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=SO06_RS24285 NZ_MYDG01000038.1 Protein Homology CDS 7703 8404 . + 0 ID=cds-WP_000252575.1;Parent=gene-SO06_RS24285;Dbxref=GenBank:WP_000252575.1;Name=WP_000252575.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=SO06_RS24285;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000252575.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 8478 10196 . - . ID=gene-SO06_RS24290;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=SO06_RS24290 NZ_MYDG01000038.1 Protein Homology CDS 8478 10196 . - 0 ID=cds-WP_001260684.1;Parent=gene-SO06_RS24290;Dbxref=GenBank:WP_001260684.1;Name=WP_001260684.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=SO06_RS24290;product=proline--tRNA ligase;protein_id=WP_001260684.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 10306 11013 . - . ID=gene-SO06_RS24295;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=SO06_RS24295 NZ_MYDG01000038.1 Protein Homology CDS 10306 11013 . - 0 ID=cds-WP_000093988.1;Parent=gene-SO06_RS24295;Dbxref=GenBank:WP_000093988.1;Name=WP_000093988.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=SO06_RS24295;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000093988.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 11010 11414 . - . ID=gene-SO06_RS24300;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=SO06_RS24300 NZ_MYDG01000038.1 Protein Homology CDS 11010 11414 . - 0 ID=cds-WP_001202315.1;Parent=gene-SO06_RS24300;Dbxref=GenBank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=SO06_RS24300;product=Rcs stress response system protein RcsF;protein_id=WP_001202315.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 11533 12348 . - . ID=gene-SO06_RS24305;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=SO06_RS24305 NZ_MYDG01000038.1 Protein Homology CDS 11533 12348 . - 0 ID=cds-WP_000874215.1;Parent=gene-SO06_RS24305;Dbxref=GenBank:WP_000874215.1;Name=WP_000874215.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=SO06_RS24305;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874215.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 12387 13040 . - . ID=gene-SO06_RS24310;Name=SO06_RS24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24310 NZ_MYDG01000038.1 Protein Homology CDS 12387 13040 . - 0 ID=cds-WP_001287486.1;Parent=gene-SO06_RS24310;Dbxref=GenBank:WP_001287486.1;Name=WP_001287486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=SO06_RS24310;product=methionine ABC transporter permease MetI;protein_id=WP_001287486.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 13033 14064 . - . ID=gene-SO06_RS24315;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=SO06_RS24315 NZ_MYDG01000038.1 Protein Homology CDS 13033 14064 . - 0 ID=cds-WP_023232522.1;Parent=gene-SO06_RS24315;Dbxref=GenBank:WP_023232522.1;Name=WP_023232522.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=SO06_RS24315;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_023232522.1;transl_table=11 NZ_MYDG01000038.1 RefSeq gene 14254 14820 . + . ID=gene-SO06_RS24320;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=SO06_RS24320 NZ_MYDG01000038.1 Protein Homology CDS 14254 14820 . + 0 ID=cds-WP_001140158.1;Parent=gene-SO06_RS24320;Dbxref=GenBank:WP_001140158.1;Name=WP_001140158.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=SO06_RS24320;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140158.1;transl_table=11 ##sequence-region NZ_MYDG01000039.1 1 13398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000039.1 RefSeq region 1 13398 . + . ID=NZ_MYDG01000039.1:1..13398;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000039.1 RefSeq pseudogene 1 1508 . - . ID=gene-SO06_RS24325;Name=SO06_RS24325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS24325;partial=true;pseudo=true;start_range=.,1 NZ_MYDG01000039.1 Protein Homology CDS 1 1508 . - 0 ID=cds-SO06_RS24325;Parent=gene-SO06_RS24325;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495017.1;locus_tag=SO06_RS24325;partial=true;product=Tn3-like element Tn3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_MYDG01000039.1 RefSeq gene 1672 2229 . + . ID=gene-SO06_RS24330;Name=SO06_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24330 NZ_MYDG01000039.1 Protein Homology CDS 1672 2229 . + 0 ID=cds-WP_001235713.1;Parent=gene-SO06_RS24330;Dbxref=GenBank:WP_001235713.1;Name=WP_001235713.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005687610.1;locus_tag=SO06_RS24330;product=recombinase family protein;protein_id=WP_001235713.1;transl_table=11 NZ_MYDG01000039.1 RefSeq gene 2412 3272 . + . ID=gene-SO06_RS24335;Name=SO06_RS24335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24335 NZ_MYDG01000039.1 Protein Homology CDS 2412 3272 . + 0 ID=cds-WP_032492330.1;Parent=gene-SO06_RS24335;Dbxref=GenBank:WP_032492330.1;Name=WP_032492330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=SO06_RS24335;product=broad-spectrum class A beta-lactamase TEM-57;protein_id=WP_032492330.1;transl_table=11 NZ_MYDG01000039.1 RefSeq pseudogene 3419 4459 . - . ID=gene-SO06_RS24340;Name=SO06_RS24340;end_range=4459,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS24340;partial=true;pseudo=true;start_range=.,3419 NZ_MYDG01000039.1 Protein Homology CDS 3419 4459 . - 0 ID=cds-SO06_RS24340;Parent=gene-SO06_RS24340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=4459,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1;locus_tag=SO06_RS24340;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,3419;transl_table=11 NZ_MYDG01000039.1 RefSeq gene 4463 4855 . + . ID=gene-SO06_RS24345;Name=SO06_RS24345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24345 NZ_MYDG01000039.1 Protein Homology CDS 4463 4855 . + 0 ID=cds-WP_001351729.1;Parent=gene-SO06_RS24345;Dbxref=GenBank:WP_001351729.1;Name=WP_001351729.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013053.7;locus_tag=SO06_RS24345;product=cysteine hydrolase family protein;protein_id=WP_001351729.1;transl_table=11 NZ_MYDG01000039.1 RefSeq gene 4993 5877 . + . ID=gene-SO06_RS24350;Name=SO06_RS24350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24350 NZ_MYDG01000039.1 Protein Homology CDS 4993 5877 . + 0 ID=cds-WP_000058717.1;Parent=gene-SO06_RS24350;Dbxref=GenBank:WP_000058717.1;Name=WP_000058717.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058717.1;locus_tag=SO06_RS24350;product=DMT family transporter;protein_id=WP_000058717.1;transl_table=11 NZ_MYDG01000039.1 RefSeq gene 5909 7108 . - . ID=gene-SO06_RS24355;Name=tet(A);gbkey=Gene;gene=tet(A);gene_biotype=protein_coding;locus_tag=SO06_RS24355 NZ_MYDG01000039.1 Protein Homology CDS 5909 7108 . - 0 ID=cds-WP_021559057.1;Parent=gene-SO06_RS24355;Dbxref=GenBank:WP_021559057.1;Name=WP_021559057.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(A);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804064.1;locus_tag=SO06_RS24355;product=tetracycline efflux MFS transporter Tet(A);protein_id=WP_021559057.1;transl_table=11 NZ_MYDG01000039.1 RefSeq gene 7214 7864 . + . ID=gene-SO06_RS24360;Name=tetR(A);gbkey=Gene;gene=tetR(A);gene_biotype=protein_coding;locus_tag=SO06_RS24360 NZ_MYDG01000039.1 Protein Homology CDS 7214 7864 . + 0 ID=cds-WP_001493764.1;Parent=gene-SO06_RS24360;Dbxref=GenBank:WP_001493764.1;Name=WP_001493764.1;gbkey=CDS;gene=tetR(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164043.1;locus_tag=SO06_RS24360;product=tetracycline resistance transcriptional repressor TetR(A);protein_id=WP_001493764.1;transl_table=11 NZ_MYDG01000039.1 RefSeq gene 8195 9586 . - . ID=gene-SO06_RS24370;Name=SO06_RS24370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24370 NZ_MYDG01000039.1 Protein Homology CDS 8195 9586 . - 0 ID=cds-WP_014839878.1;Parent=gene-SO06_RS24370;Dbxref=GenBank:WP_014839878.1;Name=WP_014839878.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001493761.1;locus_tag=SO06_RS24370;product=ISKra4-like element ISKpn19 family transposase;protein_id=WP_014839878.1;transl_table=11 NZ_MYDG01000039.1 RefSeq gene 9623 10195 . - . ID=gene-SO06_RS24375;Name=SO06_RS24375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24375 NZ_MYDG01000039.1 Protein Homology CDS 9623 10195 . - 0 ID=cds-WP_001493762.1;Parent=gene-SO06_RS24375;Dbxref=GenBank:WP_001493762.1;Name=WP_001493762.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001493762.1;locus_tag=SO06_RS24375;product=recombinase family protein;protein_id=WP_001493762.1;transl_table=11 NZ_MYDG01000039.1 RefSeq gene 10332 10922 . - . ID=gene-SO06_RS24380;Name=SO06_RS24380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24380 NZ_MYDG01000039.1 Protein Homology CDS 10332 10922 . - 0 ID=cds-WP_012477564.1;Parent=gene-SO06_RS24380;Dbxref=GenBank:WP_012477564.1;Name=WP_012477564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001366942.1;locus_tag=SO06_RS24380;product=plasmid pRiA4b ORF-3 family protein;protein_id=WP_012477564.1;transl_table=11 NZ_MYDG01000039.1 RefSeq pseudogene 11013 11195 . - . ID=gene-SO06_RS24385;Name=SO06_RS24385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS24385;partial=true;pseudo=true;start_range=.,11013 NZ_MYDG01000039.1 Protein Homology CDS 11013 11195 . - 0 ID=cds-SO06_RS24385;Parent=gene-SO06_RS24385;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152392.1;locus_tag=SO06_RS24385;partial=true;product=DUF4158 domain-containing protein;pseudo=true;start_range=.,11013;transl_table=11 NZ_MYDG01000039.1 RefSeq gene 11357 11971 . + . ID=gene-SO06_RS24390;Name=SO06_RS24390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24390 NZ_MYDG01000039.1 Protein Homology CDS 11357 11971 . + 0 ID=cds-WP_014839983.1;Parent=gene-SO06_RS24390;Dbxref=GenBank:WP_014839983.1;Name=WP_014839983.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839983.1;locus_tag=SO06_RS24390;product=recombinase family protein;protein_id=WP_014839983.1;transl_table=11 NZ_MYDG01000039.1 RefSeq gene 12290 12946 . - . ID=gene-SO06_RS24395;Name=SO06_RS24395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24395 NZ_MYDG01000039.1 Protein Homology CDS 12290 12946 . - 0 ID=cds-WP_001516695.1;Parent=gene-SO06_RS24395;Dbxref=GenBank:WP_001516695.1;Name=WP_001516695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001516695.1;locus_tag=SO06_RS24395;product=quinolone resistance pentapeptide repeat protein QnrS1;protein_id=WP_001516695.1;transl_table=11 ##sequence-region NZ_MYDG01000003.1 1 261532 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000003.1 RefSeq region 1 261532 . + . ID=NZ_MYDG01000003.1:1..261532;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000003.1 RefSeq gene 126 1079 . - . ID=gene-SO06_RS06100;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=SO06_RS06100 NZ_MYDG01000003.1 Protein Homology CDS 126 1079 . - 0 ID=cds-WP_023232702.1;Parent=gene-SO06_RS06100;Dbxref=GenBank:WP_023232702.1;Name=WP_023232702.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441126.1;locus_tag=SO06_RS06100;product=SPI-1 type III secretion system effector SopD;protein_id=WP_023232702.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 1523 4183 . + . ID=gene-SO06_RS06110;Name=SO06_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06110 NZ_MYDG01000003.1 Protein Homology CDS 1523 4183 . + 0 ID=cds-WP_023232703.1;Parent=gene-SO06_RS06110;Dbxref=GenBank:WP_023232703.1;Name=WP_023232703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029742.1;locus_tag=SO06_RS06110;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_023232703.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 4604 6154 . + . ID=gene-SO06_RS06115;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=SO06_RS06115 NZ_MYDG01000003.1 Protein Homology CDS 4604 6154 . + 0 ID=cds-WP_023232704.1;Parent=gene-SO06_RS06115;Dbxref=GenBank:WP_023232704.1;Name=WP_023232704.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000535130.1;locus_tag=SO06_RS06115;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_023232704.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 6151 6693 . + . ID=gene-SO06_RS06120;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=SO06_RS06120 NZ_MYDG01000003.1 Protein Homology CDS 6151 6693 . + 0 ID=cds-WP_023232705.1;Parent=gene-SO06_RS06120;Dbxref=GenBank:WP_023232705.1;Name=WP_023232705.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461863.1;locus_tag=SO06_RS06120;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_023232705.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 6707 7765 . + . ID=gene-SO06_RS06125;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=SO06_RS06125 NZ_MYDG01000003.1 Protein Homology CDS 6707 7765 . + 0 ID=cds-WP_023232706.1;Parent=gene-SO06_RS06125;Dbxref=GenBank:WP_023232706.1;Name=WP_023232706.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=SO06_RS06125;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_023232706.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 7776 8522 . + . ID=gene-SO06_RS06130;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=SO06_RS06130 NZ_MYDG01000003.1 Protein Homology CDS 7776 8522 . + 0 ID=cds-WP_023232707.1;Parent=gene-SO06_RS06130;Dbxref=GenBank:WP_023232707.1;Name=WP_023232707.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=SO06_RS06130;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_023232707.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 8504 9154 . + . ID=gene-SO06_RS06135;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=SO06_RS06135 NZ_MYDG01000003.1 Protein Homology CDS 8504 9154 . + 0 ID=cds-WP_023232708.1;Parent=gene-SO06_RS06135;Dbxref=GenBank:WP_023232708.1;Name=WP_023232708.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=SO06_RS06135;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_023232708.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 9151 10071 . + . ID=gene-SO06_RS06140;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=SO06_RS06140 NZ_MYDG01000003.1 Protein Homology CDS 9151 10071 . + 0 ID=cds-WP_020839116.1;Parent=gene-SO06_RS06140;Dbxref=GenBank:WP_020839116.1;Name=WP_020839116.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=SO06_RS06140;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_020839116.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 10071 10364 . + . ID=gene-SO06_RS06145;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=SO06_RS06145 NZ_MYDG01000003.1 Protein Homology CDS 10071 10364 . + 0 ID=cds-WP_001518648.1;Parent=gene-SO06_RS06145;Dbxref=GenBank:WP_001518648.1;Name=WP_001518648.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=SO06_RS06145;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_001518648.1;transl_table=11 NZ_MYDG01000003.1 RefSeq direct_repeat 10461 12381 . + . ID=id-NZ_MYDG01000003.1:10461..12381;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=10461..10489;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg NZ_MYDG01000003.1 RefSeq gene 12396 13442 . - . ID=gene-SO06_RS06150;Name=SO06_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06150 NZ_MYDG01000003.1 Protein Homology CDS 12396 13442 . - 0 ID=cds-WP_023232709.1;Parent=gene-SO06_RS06150;Dbxref=GenBank:WP_023232709.1;Name=WP_023232709.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=SO06_RS06150;product=aminopeptidase;protein_id=WP_023232709.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 13693 14601 . + . ID=gene-SO06_RS06155;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=SO06_RS06155 NZ_MYDG01000003.1 Protein Homology CDS 13693 14601 . + 0 ID=cds-WP_000372384.1;Parent=gene-SO06_RS06155;Dbxref=GenBank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=SO06_RS06155;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 14611 16050 . + . ID=gene-SO06_RS06160;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=SO06_RS06160 NZ_MYDG01000003.1 Protein Homology CDS 14611 16050 . + 0 ID=cds-WP_023232710.1;Parent=gene-SO06_RS06160;Dbxref=GenBank:WP_023232710.1;Name=WP_023232710.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=SO06_RS06160;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_023232710.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 16037 16642 . + . ID=gene-SO06_RS06165;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=SO06_RS06165 NZ_MYDG01000003.1 Protein Homology CDS 16037 16642 . + 0 ID=cds-WP_080204174.1;Parent=gene-SO06_RS06165;Dbxref=GenBank:WP_080204174.1;Name=WP_080204174.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=SO06_RS06165;product=adenylyl-sulfate kinase;protein_id=WP_080204174.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 16693 17016 . + . ID=gene-SO06_RS06170;Name=SO06_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06170 NZ_MYDG01000003.1 Protein Homology CDS 16693 17016 . + 0 ID=cds-WP_001537530.1;Parent=gene-SO06_RS06170;Dbxref=GenBank:WP_001537530.1;Name=WP_001537530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=SO06_RS06170;product=DUF3561 family protein;protein_id=WP_001537530.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 17207 17518 . + . ID=gene-SO06_RS06175;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=SO06_RS06175 NZ_MYDG01000003.1 Protein Homology CDS 17207 17518 . + 0 ID=cds-WP_000517480.1;Parent=gene-SO06_RS06175;Dbxref=GenBank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=SO06_RS06175;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 17537 18247 . + . ID=gene-SO06_RS06180;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=SO06_RS06180 NZ_MYDG01000003.1 Protein Homology CDS 17537 18247 . + 0 ID=cds-WP_020839118.1;Parent=gene-SO06_RS06180;Dbxref=GenBank:WP_020839118.1;Name=WP_020839118.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=SO06_RS06180;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_020839118.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 18247 18726 . + . ID=gene-SO06_RS06185;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=SO06_RS06185 NZ_MYDG01000003.1 Protein Homology CDS 18247 18726 . + 0 ID=cds-WP_001219245.1;Parent=gene-SO06_RS06185;Dbxref=GenBank:WP_001219245.1;Name=WP_001219245.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=SO06_RS06185;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219245.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 18723 19772 . + . ID=gene-SO06_RS06190;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=SO06_RS06190 NZ_MYDG01000003.1 Protein Homology CDS 18723 19772 . + 0 ID=cds-WP_000134246.1;Parent=gene-SO06_RS06190;Dbxref=GenBank:WP_000134246.1;Name=WP_000134246.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=SO06_RS06190;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134246.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 19753 20514 . + . ID=gene-SO06_RS06195;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=SO06_RS06195 NZ_MYDG01000003.1 Protein Homology CDS 19753 20514 . + 0 ID=cds-WP_001221538.1;Parent=gene-SO06_RS06195;Dbxref=GenBank:WP_001221538.1;Name=WP_001221538.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=SO06_RS06195;product=5'/3'-nucleotidase SurE;protein_id=WP_001221538.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 20508 21134 . + . ID=gene-SO06_RS06200;Name=SO06_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06200 NZ_MYDG01000003.1 Protein Homology CDS 20508 21134 . + 0 ID=cds-WP_000253545.1;Parent=gene-SO06_RS06200;Dbxref=GenBank:WP_000253545.1;Name=WP_000253545.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=SO06_RS06200;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253545.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 21273 21431 . - . ID=gene-SO06_RS25480;Name=SO06_RS25480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25480 NZ_MYDG01000003.1 Protein Homology CDS 21273 21431 . - 0 ID=cds-WP_223148970.1;Parent=gene-SO06_RS25480;Dbxref=GenBank:WP_223148970.1;Name=WP_223148970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=SO06_RS25480;product=peptidase;protein_id=WP_223148970.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 21361 22440 . + . ID=gene-SO06_RS06205;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=SO06_RS06205 NZ_MYDG01000003.1 Protein Homology CDS 21361 22440 . + 0 ID=cds-WP_223156435.1;Parent=gene-SO06_RS06205;Dbxref=GenBank:WP_223156435.1;Name=WP_223156435.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=SO06_RS06205;product=murein hydrolase activator NlpD;protein_id=WP_223156435.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 22503 23495 . + . ID=gene-SO06_RS06210;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=SO06_RS06210 NZ_MYDG01000003.1 Protein Homology CDS 22503 23495 . + 0 ID=cds-WP_000081498.1;Parent=gene-SO06_RS06210;Dbxref=GenBank:WP_000081498.1;Name=WP_000081498.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=SO06_RS06210;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081498.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 23541 23777 . - . ID=gene-SO06_RS06215;Name=SO06_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06215 NZ_MYDG01000003.1 Protein Homology CDS 23541 23777 . - 0 ID=cds-WP_000562964.1;Parent=gene-SO06_RS06215;Dbxref=GenBank:WP_000562964.1;Name=WP_000562964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=SO06_RS06215;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562964.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 23788 25215 . - . ID=gene-SO06_RS06220;Name=SO06_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06220 NZ_MYDG01000003.1 Protein Homology CDS 23788 25215 . - 0 ID=cds-WP_023232713.1;Parent=gene-SO06_RS06220;Dbxref=GenBank:WP_023232713.1;Name=WP_023232713.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=SO06_RS06220;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_023232713.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 25215 25808 . - . ID=gene-SO06_RS06225;Name=SO06_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06225 NZ_MYDG01000003.1 Protein Homology CDS 25215 25808 . - 0 ID=cds-WP_001237183.1;Parent=gene-SO06_RS06225;Dbxref=GenBank:WP_001237183.1;Name=WP_001237183.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=SO06_RS06225;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_001237183.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 25979 26383 . + . ID=gene-SO06_RS06230;Name=SO06_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06230 NZ_MYDG01000003.1 Protein Homology CDS 25979 26383 . + 0 ID=cds-WP_000423338.1;Parent=gene-SO06_RS06230;Dbxref=GenBank:WP_000423338.1;Name=WP_000423338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=SO06_RS06230;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 26402 27166 . - . ID=gene-SO06_RS06235;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=SO06_RS06235 NZ_MYDG01000003.1 Protein Homology CDS 26402 27166 . - 0 ID=cds-WP_000613179.1;Parent=gene-SO06_RS06235;Dbxref=GenBank:WP_000613179.1;Name=WP_000613179.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=SO06_RS06235;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_000613179.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 27363 28286 . + . ID=gene-SO06_RS06240;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=SO06_RS06240 NZ_MYDG01000003.1 Protein Homology CDS 27363 28286 . + 0 ID=cds-WP_000206958.1;Parent=gene-SO06_RS06240;Dbxref=GenBank:WP_000206958.1;Name=WP_000206958.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=SO06_RS06240;product=L-threonate dehydrogenase;protein_id=WP_000206958.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 28280 29542 . + . ID=gene-SO06_RS06245;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=SO06_RS06245 NZ_MYDG01000003.1 Protein Homology CDS 28280 29542 . + 0 ID=cds-WP_000912488.1;Parent=gene-SO06_RS06245;Dbxref=GenBank:WP_000912488.1;Name=WP_000912488.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=SO06_RS06245;product=3-oxo-tetronate kinase;protein_id=WP_000912488.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 29539 30177 . + . ID=gene-SO06_RS06250;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=protein_coding;locus_tag=SO06_RS06250 NZ_MYDG01000003.1 Protein Homology CDS 29539 30177 . + 0 ID=cds-WP_000209068.1;Parent=gene-SO06_RS06250;Dbxref=GenBank:WP_000209068.1;Name=WP_000209068.1;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=SO06_RS06250;product=3-oxo-tetronate 4-phosphate decarboxylase;protein_id=WP_000209068.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 30182 30958 . + . ID=gene-SO06_RS06255;Name=SO06_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06255 NZ_MYDG01000003.1 Protein Homology CDS 30182 30958 . + 0 ID=cds-WP_048348954.1;Parent=gene-SO06_RS06255;Dbxref=GenBank:WP_048348954.1;Name=WP_048348954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=SO06_RS06255;product=HPr family phosphocarrier protein;protein_id=WP_048348954.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 30998 31948 . + . ID=gene-SO06_RS06260;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=SO06_RS06260 NZ_MYDG01000003.1 Protein Homology CDS 30998 31948 . + 0 ID=cds-WP_001165731.1;Parent=gene-SO06_RS06260;Dbxref=GenBank:WP_001165731.1;Name=WP_001165731.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=SO06_RS06260;product=D-erythronate dehydrogenase;protein_id=WP_001165731.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 31945 33441 . + . ID=gene-SO06_RS06265;Name=SO06_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06265 NZ_MYDG01000003.1 Protein Homology CDS 31945 33441 . + 0 ID=cds-WP_000202725.1;Parent=gene-SO06_RS06265;Dbxref=GenBank:WP_000202725.1;Name=WP_000202725.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=SO06_RS06265;product=GntP family permease;protein_id=WP_000202725.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 33483 34415 . - . ID=gene-SO06_RS06270;Name=SO06_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06270 NZ_MYDG01000003.1 Protein Homology CDS 33483 34415 . - 0 ID=cds-WP_072103646.1;Parent=gene-SO06_RS06270;Dbxref=GenBank:WP_072103646.1;Name=WP_072103646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216314.1;locus_tag=SO06_RS06270;product=LysR family transcriptional regulator;protein_id=WP_072103646.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 34503 35711 . + . ID=gene-SO06_RS06275;Name=SO06_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06275 NZ_MYDG01000003.1 Protein Homology CDS 34503 35711 . + 0 ID=cds-WP_023231400.1;Parent=gene-SO06_RS06275;Dbxref=GenBank:WP_023231400.1;Name=WP_023231400.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=SO06_RS06275;product=MFS transporter;protein_id=WP_023231400.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 35708 36088 . + . ID=gene-SO06_RS06280;Name=SO06_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06280 NZ_MYDG01000003.1 Protein Homology CDS 35708 36088 . + 0 ID=cds-WP_001070475.1;Parent=gene-SO06_RS06280;Dbxref=GenBank:WP_001070475.1;Name=WP_001070475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=SO06_RS06280;product=DUF4440 domain-containing protein;protein_id=WP_001070475.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 36144 38711 . - . ID=gene-SO06_RS06285;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=SO06_RS06285 NZ_MYDG01000003.1 Protein Homology CDS 36144 38711 . - 0 ID=cds-WP_001005814.1;Parent=gene-SO06_RS06285;Dbxref=GenBank:WP_001005814.1;Name=WP_001005814.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=SO06_RS06285;product=DNA mismatch repair protein MutS;protein_id=WP_001005814.1;transl_table=11 NZ_MYDG01000003.1 RefSeq pseudogene 38870 39396 . + . ID=gene-SO06_RS06290;Name=SO06_RS06290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS06290;pseudo=true NZ_MYDG01000003.1 Protein Homology CDS 38870 39396 . + 0 ID=cds-SO06_RS06290;Parent=gene-SO06_RS06290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=SO06_RS06290;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 39639 40295 . - . ID=gene-SO06_RS06295;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=SO06_RS06295 NZ_MYDG01000003.1 Protein Homology CDS 39639 40295 . - 0 ID=cds-WP_000420451.1;Parent=gene-SO06_RS06295;Dbxref=GenBank:WP_000420451.1;Name=WP_000420451.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=SO06_RS06295;product=protein-serine/threonine phosphatase;protein_id=WP_000420451.1;transl_table=11 NZ_MYDG01000003.1 RefSeq pseudogene 40642 40859 . + . ID=gene-SO06_RS06300;Name=SO06_RS06300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS06300;partial=true;pseudo=true;start_range=.,40642 NZ_MYDG01000003.1 Protein Homology CDS 40642 40859 . + 0 ID=cds-SO06_RS06300;Parent=gene-SO06_RS06300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=SO06_RS06300;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,40642;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 40932 41459 . - . ID=gene-SO06_RS06305;Name=SO06_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06305 NZ_MYDG01000003.1 Protein Homology CDS 40932 41459 . - 0 ID=cds-WP_023231965.1;Parent=gene-SO06_RS06305;Dbxref=GenBank:WP_023231965.1;Name=WP_023231965.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=SO06_RS06305;product=GNAT family N-acetyltransferase;protein_id=WP_023231965.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 41456 41746 . - . ID=gene-SO06_RS06310;Name=SO06_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06310 NZ_MYDG01000003.1 Protein Homology CDS 41456 41746 . - 0 ID=cds-WP_000855694.1;Parent=gene-SO06_RS06310;Dbxref=GenBank:WP_000855694.1;Name=WP_000855694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=SO06_RS06310;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_000855694.1;transl_table=11 NZ_MYDG01000003.1 RefSeq pseudogene 42016 42205 . - . ID=gene-SO06_RS06315;Name=SO06_RS06315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS06315;partial=true;pseudo=true;start_range=.,42016 NZ_MYDG01000003.1 Protein Homology CDS 42016 42205 . - 0 ID=cds-SO06_RS06315;Parent=gene-SO06_RS06315;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=SO06_RS06315;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,42016;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 42610 43053 . - . ID=gene-SO06_RS06320;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=SO06_RS06320 NZ_MYDG01000003.1 Protein Homology CDS 42610 43053 . - 0 ID=cds-WP_000715096.1;Parent=gene-SO06_RS06320;Dbxref=GenBank:WP_000715096.1;Name=WP_000715096.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=SO06_RS06320;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_000715096.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 43510 44160 . + . ID=gene-SO06_RS06325;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=SO06_RS06325 NZ_MYDG01000003.1 Protein Homology CDS 43510 44160 . + 0 ID=cds-WP_001728903.1;Parent=gene-SO06_RS06325;Dbxref=GenBank:WP_001728903.1;Name=WP_001728903.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=SO06_RS06325;product=type III secretion system transcriptional activator InvF;protein_id=WP_001728903.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 44157 45845 . + . ID=gene-SO06_RS06330;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=SO06_RS06330 NZ_MYDG01000003.1 Protein Homology CDS 44157 45845 . + 0 ID=cds-WP_000848114.1;Parent=gene-SO06_RS06330;Dbxref=GenBank:WP_000848114.1;Name=WP_000848114.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=SO06_RS06330;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848114.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 45842 46960 . + . ID=gene-SO06_RS06335;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=SO06_RS06335 NZ_MYDG01000003.1 Protein Homology CDS 45842 46960 . + 0 ID=cds-WP_000612166.1;Parent=gene-SO06_RS06335;Dbxref=GenBank:WP_000612166.1;Name=WP_000612166.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=SO06_RS06335;product=type III secretion system gatekeeper InvE;protein_id=WP_000612166.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 46985 49042 . + . ID=gene-SO06_RS06340;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=SO06_RS06340 NZ_MYDG01000003.1 Protein Homology CDS 46985 49042 . + 0 ID=cds-WP_000927219.1;Parent=gene-SO06_RS06340;Dbxref=GenBank:WP_000927219.1;Name=WP_000927219.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=SO06_RS06340;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927219.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 49066 49473 . + . ID=gene-SO06_RS06345;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=SO06_RS06345 NZ_MYDG01000003.1 Protein Homology CDS 49066 49473 . + 0 ID=cds-WP_001164066.1;Parent=gene-SO06_RS06345;Dbxref=GenBank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=SO06_RS06345;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 49470 50765 . + . ID=gene-SO06_RS06350;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=SO06_RS06350 NZ_MYDG01000003.1 Protein Homology CDS 49470 50765 . + 0 ID=cds-WP_000856766.1;Parent=gene-SO06_RS06350;Dbxref=GenBank:WP_000856766.1;Name=WP_000856766.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=SO06_RS06350;product=SctN family type III secretion system ATPase InvC;protein_id=WP_000856766.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 50743 51186 . + . ID=gene-SO06_RS06355;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=SO06_RS06355 NZ_MYDG01000003.1 Protein Homology CDS 50743 51186 . + 0 ID=cds-WP_000555884.1;Parent=gene-SO06_RS06355;Dbxref=GenBank:WP_000555884.1;Name=WP_000555884.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=SO06_RS06355;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_000555884.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 51186 52196 . + . ID=gene-SO06_RS06360;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=SO06_RS06360 NZ_MYDG01000003.1 Protein Homology CDS 51186 52196 . + 0 ID=cds-WP_023231967.1;Parent=gene-SO06_RS06360;Dbxref=GenBank:WP_023231967.1;Name=WP_023231967.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=SO06_RS06360;product=SPI-1 type III secretion system protein SpaN;protein_id=WP_023231967.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 52196 53107 . + . ID=gene-SO06_RS06365;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=SO06_RS06365 NZ_MYDG01000003.1 Protein Homology CDS 52196 53107 . + 0 ID=cds-WP_000058734.1;Parent=gene-SO06_RS06365;Dbxref=GenBank:WP_000058734.1;Name=WP_000058734.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=SO06_RS06365;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058734.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 53097 53771 . + . ID=gene-SO06_RS06370;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=SO06_RS06370 NZ_MYDG01000003.1 Protein Homology CDS 53097 53771 . + 0 ID=cds-WP_000526016.1;Parent=gene-SO06_RS06370;Dbxref=GenBank:WP_000526016.1;Name=WP_000526016.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=SO06_RS06370;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_000526016.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 53797 54057 . + . ID=gene-SO06_RS06375;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=SO06_RS06375 NZ_MYDG01000003.1 Protein Homology CDS 53797 54057 . + 0 ID=cds-WP_000342503.1;Parent=gene-SO06_RS06375;Dbxref=GenBank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=SO06_RS06375;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 54061 54852 . + . ID=gene-SO06_RS06380;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=SO06_RS06380 NZ_MYDG01000003.1 Protein Homology CDS 54061 54852 . + 0 ID=cds-WP_000498965.1;Parent=gene-SO06_RS06380;Dbxref=GenBank:WP_000498965.1;Name=WP_000498965.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=SO06_RS06380;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_000498965.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 54839 55909 . + . ID=gene-SO06_RS06385;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=SO06_RS06385 NZ_MYDG01000003.1 Protein Homology CDS 54839 55909 . + 0 ID=cds-WP_000097719.1;Parent=gene-SO06_RS06385;Dbxref=GenBank:WP_000097719.1;Name=WP_000097719.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=SO06_RS06385;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097719.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 56047 56544 . + . ID=gene-SO06_RS06390;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=SO06_RS06390 NZ_MYDG01000003.1 Protein Homology CDS 56047 56544 . + 0 ID=cds-WP_000386309.1;Parent=gene-SO06_RS06390;Dbxref=GenBank:WP_000386309.1;Name=WP_000386309.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=SO06_RS06390;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_000386309.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 56547 58328 . + . ID=gene-SO06_RS06395;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=SO06_RS06395 NZ_MYDG01000003.1 Protein Homology CDS 56547 58328 . + 0 ID=cds-WP_000245782.1;Parent=gene-SO06_RS06395;Dbxref=GenBank:WP_000245782.1;Name=WP_000245782.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=SO06_RS06395;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_000245782.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 58356 59585 . + . ID=gene-SO06_RS06400;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=SO06_RS06400 NZ_MYDG01000003.1 Protein Homology CDS 58356 59585 . + 0 ID=cds-WP_000909019.1;Parent=gene-SO06_RS06400;Dbxref=GenBank:WP_000909019.1;Name=WP_000909019.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=SO06_RS06400;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909019.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 59656 60687 . + . ID=gene-SO06_RS06405;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=SO06_RS06405 NZ_MYDG01000003.1 Protein Homology CDS 59656 60687 . + 0 ID=cds-WP_023231968.1;Parent=gene-SO06_RS06405;Dbxref=GenBank:WP_023231968.1;Name=WP_023231968.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=SO06_RS06405;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_023231968.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 60706 62763 . + . ID=gene-SO06_RS06410;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=SO06_RS06410 NZ_MYDG01000003.1 Protein Homology CDS 60706 62763 . + 0 ID=cds-WP_048348952.1;Parent=gene-SO06_RS06410;Dbxref=GenBank:WP_048348952.1;Name=WP_048348952.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=SO06_RS06410;product=SPI-1 type III secretion system effector SipA;protein_id=WP_048348952.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 62782 63030 . + . ID=gene-SO06_RS06415;Name=SO06_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06415 NZ_MYDG01000003.1 Protein Homology CDS 62782 63030 . + 0 ID=cds-WP_001055579.1;Parent=gene-SO06_RS06415;Dbxref=GenBank:WP_001055579.1;Name=WP_001055579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=SO06_RS06415;product=acyl carrier protein;protein_id=WP_001055579.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 63074 63334 . + . ID=gene-SO06_RS06420;Name=SO06_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06420 NZ_MYDG01000003.1 Protein Homology CDS 63074 63334 . + 0 ID=cds-WP_000692252.1;Parent=gene-SO06_RS06420;Dbxref=GenBank:WP_000692252.1;Name=WP_000692252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=SO06_RS06420;product=hypothetical protein;protein_id=WP_000692252.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 63361 63753 . + . ID=gene-SO06_RS06425;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=SO06_RS06425 NZ_MYDG01000003.1 Protein Homology CDS 63361 63753 . + 0 ID=cds-WP_001748715.1;Parent=gene-SO06_RS06425;Dbxref=GenBank:WP_001748715.1;Name=WP_001748715.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=SO06_RS06425;product=chaperone SicP;protein_id=WP_001748715.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 63740 65371 . + . ID=gene-SO06_RS06430;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=SO06_RS06430 NZ_MYDG01000003.1 Protein Homology CDS 63740 65371 . + 0 ID=cds-WP_023231971.1;Parent=gene-SO06_RS06430;Dbxref=GenBank:WP_023231971.1;Name=WP_023231971.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=SO06_RS06430;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WP_023231971.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 65425 65907 . - . ID=gene-SO06_RS06435;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=SO06_RS06435 NZ_MYDG01000003.1 Protein Homology CDS 65425 65907 . - 0 ID=cds-WP_000558930.1;Parent=gene-SO06_RS06435;Dbxref=GenBank:WP_000558930.1;Name=WP_000558930.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=SO06_RS06435;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_000558930.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 65925 67586 . - . ID=gene-SO06_RS06440;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=SO06_RS06440 NZ_MYDG01000003.1 Protein Homology CDS 65925 67586 . - 0 ID=cds-WP_001120085.1;Parent=gene-SO06_RS06440;Dbxref=GenBank:WP_001120085.1;Name=WP_001120085.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=SO06_RS06440;product=transcriptional regulator HilA;protein_id=WP_001120085.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 68675 69604 . - . ID=gene-SO06_RS06445;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=SO06_RS06445 NZ_MYDG01000003.1 Protein Homology CDS 68675 69604 . - 0 ID=cds-WP_000432699.1;Parent=gene-SO06_RS06445;Dbxref=GenBank:WP_000432699.1;Name=WP_000432699.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=SO06_RS06445;product=transcriptional regulator HilD;protein_id=WP_000432699.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 69920 71098 . + . ID=gene-SO06_RS06450;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=SO06_RS06450 NZ_MYDG01000003.1 Protein Homology CDS 69920 71098 . + 0 ID=cds-WP_000450196.1;Parent=gene-SO06_RS06450;Dbxref=GenBank:WP_000450196.1;Name=WP_000450196.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=SO06_RS06450;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_000450196.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 71123 71365 . + . ID=gene-SO06_RS06455;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=SO06_RS06455 NZ_MYDG01000003.1 Protein Homology CDS 71123 71365 . + 0 ID=cds-WP_000235229.1;Parent=gene-SO06_RS06455;Dbxref=GenBank:WP_000235229.1;Name=WP_000235229.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=SO06_RS06455;product=type III secretion system needle filament protein PrgI;protein_id=WP_000235229.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 71384 71689 . + . ID=gene-SO06_RS06460;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=SO06_RS06460 NZ_MYDG01000003.1 Protein Homology CDS 71384 71689 . + 0 ID=cds-WP_000020431.1;Parent=gene-SO06_RS06460;Dbxref=GenBank:WP_000020431.1;Name=WP_000020431.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=SO06_RS06460;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020431.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 71686 72444 . + . ID=gene-SO06_RS06465;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=SO06_RS06465 NZ_MYDG01000003.1 Protein Homology CDS 71686 72444 . + 0 ID=cds-WP_000621238.1;Parent=gene-SO06_RS06465;Dbxref=GenBank:WP_000621238.1;Name=WP_000621238.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=SO06_RS06465;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000621238.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 72416 73015 . + . ID=gene-SO06_RS06470;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=SO06_RS06470 NZ_MYDG01000003.1 Protein Homology CDS 72416 73015 . + 0 ID=cds-WP_001591231.1;Parent=gene-SO06_RS06470;Dbxref=GenBank:WP_001591231.1;Name=WP_001591231.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=SO06_RS06470;product=oxygen-regulated invasion protein OrgA;protein_id=WP_001591231.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 72972 73643 . + . ID=gene-SO06_RS06475;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=SO06_RS06475 NZ_MYDG01000003.1 Protein Homology CDS 72972 73643 . + 0 ID=cds-WP_000916655.1;Parent=gene-SO06_RS06475;Dbxref=GenBank:WP_000916655.1;Name=WP_000916655.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835247.1;locus_tag=SO06_RS06475;product=type III secretion system linker protein OrgB;protein_id=WP_000916655.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 73659 74111 . + . ID=gene-SO06_RS06480;Name=SO06_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06480 NZ_MYDG01000003.1 Protein Homology CDS 73659 74111 . + 0 ID=cds-WP_000612178.1;Parent=gene-SO06_RS06480;Dbxref=GenBank:WP_000612178.1;Name=WP_000612178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=SO06_RS06480;product=type III secretion system effector protein OrgC;protein_id=WP_000612178.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 74457 75344 . + . ID=gene-SO06_RS06485;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=SO06_RS06485 NZ_MYDG01000003.1 Protein Homology CDS 74457 75344 . + 0 ID=cds-WP_000243998.1;Parent=gene-SO06_RS06485;Dbxref=GenBank:WP_000243998.1;Name=WP_000243998.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=SO06_RS06485;product=invasion transcriptional regulator HilC;protein_id=WP_000243998.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 75729 76484 . + . ID=gene-SO06_RS06495;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=SO06_RS06495 NZ_MYDG01000003.1 Protein Homology CDS 75729 76484 . + 0 ID=cds-WP_001246666.1;Parent=gene-SO06_RS06495;Dbxref=GenBank:WP_001246666.1;Name=WP_001246666.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=SO06_RS06495;product=transcriptional regulator SprB;protein_id=WP_001246666.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 76645 77553 . + . ID=gene-SO06_RS06500;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=SO06_RS06500 NZ_MYDG01000003.1 Protein Homology CDS 76645 77553 . + 0 ID=cds-WP_021000700.1;Parent=gene-SO06_RS06500;Dbxref=GenBank:WP_021000700.1;Name=WP_021000700.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461786.1;locus_tag=SO06_RS06500;product=type III secretion system YopJ family effector AvrA;protein_id=WP_021000700.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 77652 78500 . - . ID=gene-SO06_RS06505;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=SO06_RS06505 NZ_MYDG01000003.1 Protein Homology CDS 77652 78500 . - 0 ID=cds-WP_000480209.1;Parent=gene-SO06_RS06505;Dbxref=GenBank:WP_000480209.1;Name=WP_000480209.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=SO06_RS06505;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000480209.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 78491 79351 . - . ID=gene-SO06_RS06510;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=SO06_RS06510 NZ_MYDG01000003.1 Protein Homology CDS 78491 79351 . - 0 ID=cds-WP_001104336.1;Parent=gene-SO06_RS06510;Dbxref=GenBank:WP_001104336.1;Name=WP_001104336.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=SO06_RS06510;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104336.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 79348 80169 . - . ID=gene-SO06_RS06515;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=SO06_RS06515 NZ_MYDG01000003.1 Protein Homology CDS 79348 80169 . - 0 ID=cds-WP_000083153.1;Parent=gene-SO06_RS06515;Dbxref=GenBank:WP_000083153.1;Name=WP_000083153.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=SO06_RS06515;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_000083153.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 80166 81083 . - . ID=gene-SO06_RS06520;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=SO06_RS06520 NZ_MYDG01000003.1 Protein Homology CDS 80166 81083 . - 0 ID=cds-WP_000182930.1;Parent=gene-SO06_RS06520;Dbxref=GenBank:WP_000182930.1;Name=WP_000182930.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=SO06_RS06520;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182930.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 81265 81609 . + . ID=gene-SO06_RS06525;Name=SO06_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06525 NZ_MYDG01000003.1 Protein Homology CDS 81265 81609 . + 0 ID=cds-WP_001117940.1;Parent=gene-SO06_RS06525;Dbxref=GenBank:WP_001117940.1;Name=WP_001117940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=SO06_RS06525;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_001117940.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 81671 83749 . - . ID=gene-SO06_RS06530;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=SO06_RS06530 NZ_MYDG01000003.1 Protein Homology CDS 81671 83749 . - 0 ID=cds-WP_000122692.1;Parent=gene-SO06_RS06530;Dbxref=GenBank:WP_000122692.1;Name=WP_000122692.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=SO06_RS06530;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122692.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 83968 84978 . - . ID=gene-SO06_RS06535;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=SO06_RS06535 NZ_MYDG01000003.1 Protein Homology CDS 83968 84978 . - 0 ID=cds-WP_001059962.1;Parent=gene-SO06_RS06535;Dbxref=GenBank:WP_001059962.1;Name=WP_001059962.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=SO06_RS06535;product=hydrogenase expression/formation protein HypE;protein_id=WP_001059962.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 84975 86096 . - . ID=gene-SO06_RS06540;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=SO06_RS06540 NZ_MYDG01000003.1 Protein Homology CDS 84975 86096 . - 0 ID=cds-WP_001212958.1;Parent=gene-SO06_RS06540;Dbxref=GenBank:WP_001212958.1;Name=WP_001212958.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=SO06_RS06540;product=hydrogenase formation protein HypD;protein_id=WP_001212958.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 86096 86368 . - . ID=gene-SO06_RS06545;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=SO06_RS06545 NZ_MYDG01000003.1 Protein Homology CDS 86096 86368 . - 0 ID=cds-WP_000334871.1;Parent=gene-SO06_RS06545;Dbxref=GenBank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=SO06_RS06545;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 86359 87231 . - . ID=gene-SO06_RS06550;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=SO06_RS06550 NZ_MYDG01000003.1 Protein Homology CDS 86359 87231 . - 0 ID=cds-WP_000337640.1;Parent=gene-SO06_RS06550;Dbxref=GenBank:WP_000337640.1;Name=WP_000337640.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=SO06_RS06550;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337640.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 87300 87656 . - . ID=gene-SO06_RS06555;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=SO06_RS06555 NZ_MYDG01000003.1 Protein Homology CDS 87300 87656 . - 0 ID=cds-WP_000544461.1;Parent=gene-SO06_RS06555;Dbxref=GenBank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=SO06_RS06555;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 87866 88327 . + . ID=gene-SO06_RS06565;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=SO06_RS06565 NZ_MYDG01000003.1 Protein Homology CDS 87866 88327 . + 0 ID=cds-WP_000158075.1;Parent=gene-SO06_RS06565;Dbxref=GenBank:WP_000158075.1;Name=WP_000158075.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=SO06_RS06565;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158075.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 88473 89081 . + . ID=gene-SO06_RS06570;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=SO06_RS06570 NZ_MYDG01000003.1 Protein Homology CDS 88473 89081 . + 0 ID=cds-WP_001079164.1;Parent=gene-SO06_RS06570;Dbxref=GenBank:WP_001079164.1;Name=WP_001079164.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=SO06_RS06570;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079164.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 89081 90907 . + . ID=gene-SO06_RS06575;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=SO06_RS06575 NZ_MYDG01000003.1 Protein Homology CDS 89081 90907 . + 0 ID=cds-WP_000097041.1;Parent=gene-SO06_RS06575;Dbxref=GenBank:WP_000097041.1;Name=WP_000097041.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=SO06_RS06575;product=formate hydrogenlyase subunit 3;protein_id=WP_000097041.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 90910 91833 . + . ID=gene-SO06_RS06580;Name=SO06_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06580 NZ_MYDG01000003.1 Protein Homology CDS 90910 91833 . + 0 ID=cds-WP_000110563.1;Parent=gene-SO06_RS06580;Dbxref=GenBank:WP_000110563.1;Name=WP_000110563.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=SO06_RS06580;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_000110563.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 91851 93560 . + . ID=gene-SO06_RS06585;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=SO06_RS06585 NZ_MYDG01000003.1 Protein Homology CDS 91851 93560 . + 0 ID=cds-WP_001288155.1;Parent=gene-SO06_RS06585;Dbxref=GenBank:WP_001288155.1;Name=WP_001288155.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=SO06_RS06585;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288155.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 93570 94112 . + . ID=gene-SO06_RS06590;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=SO06_RS06590 NZ_MYDG01000003.1 Protein Homology CDS 93570 94112 . + 0 ID=cds-WP_000493773.1;Parent=gene-SO06_RS06590;Dbxref=GenBank:WP_000493773.1;Name=WP_000493773.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=SO06_RS06590;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493773.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 94112 94879 . + . ID=gene-SO06_RS06595;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=SO06_RS06595 NZ_MYDG01000003.1 Protein Homology CDS 94112 94879 . + 0 ID=cds-WP_000067422.1;Parent=gene-SO06_RS06595;Dbxref=GenBank:WP_000067422.1;Name=WP_000067422.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=SO06_RS06595;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067422.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 94876 95286 . + . ID=gene-SO06_RS06600;Name=SO06_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06600 NZ_MYDG01000003.1 Protein Homology CDS 94876 95286 . + 0 ID=cds-WP_000003725.1;Parent=gene-SO06_RS06600;Dbxref=GenBank:WP_000003725.1;Name=WP_000003725.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=SO06_RS06600;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_000003725.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 95279 95749 . + . ID=gene-SO06_RS06605;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=SO06_RS06605 NZ_MYDG01000003.1 Protein Homology CDS 95279 95749 . + 0 ID=cds-WP_000132987.1;Parent=gene-SO06_RS06605;Dbxref=GenBank:WP_000132987.1;Name=WP_000132987.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=SO06_RS06605;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132987.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 95776 96585 . + . ID=gene-SO06_RS06610;Name=SO06_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06610 NZ_MYDG01000003.1 Protein Homology CDS 95776 96585 . + 0 ID=cds-WP_000936681.1;Parent=gene-SO06_RS06610;Dbxref=GenBank:WP_000936681.1;Name=WP_000936681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=SO06_RS06610;product=hypothetical protein;protein_id=WP_000936681.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 96786 97331 . + . ID=gene-SO06_RS06615;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=SO06_RS06615 NZ_MYDG01000003.1 Protein Homology CDS 96786 97331 . + 0 ID=cds-WP_001078791.1;Parent=gene-SO06_RS06615;Dbxref=GenBank:WP_001078791.1;Name=WP_001078791.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=SO06_RS06615;product=electron transport protein HydN;protein_id=WP_001078791.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 97477 99717 . + . ID=gene-SO06_RS06620;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=SO06_RS06620 NZ_MYDG01000003.1 Protein Homology CDS 97477 99717 . + 0 ID=cds-WP_023231976.1;Parent=gene-SO06_RS06620;Dbxref=GenBank:WP_023231976.1;Name=WP_023231976.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=SO06_RS06620;product=carbamoyltransferase HypF;protein_id=WP_023231976.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 99814 100947 . - . ID=gene-SO06_RS06625;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=SO06_RS06625 NZ_MYDG01000003.1 Protein Homology CDS 99814 100947 . - 0 ID=cds-WP_000086335.1;Parent=gene-SO06_RS06625;Dbxref=GenBank:WP_000086335.1;Name=WP_000086335.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=SO06_RS06625;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000086335.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 100944 102383 . - . ID=gene-SO06_RS06630;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=SO06_RS06630 NZ_MYDG01000003.1 Protein Homology CDS 100944 102383 . - 0 ID=cds-WP_000026012.1;Parent=gene-SO06_RS06630;Dbxref=GenBank:WP_000026012.1;Name=WP_000026012.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=SO06_RS06630;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000026012.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 102569 104089 . + . ID=gene-SO06_RS06635;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=SO06_RS06635 NZ_MYDG01000003.1 Protein Homology CDS 102569 104089 . + 0 ID=cds-WP_000010816.1;Parent=gene-SO06_RS06635;Dbxref=GenBank:WP_000010816.1;Name=WP_000010816.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=SO06_RS06635;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010816.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 104086 105051 . - . ID=gene-SO06_RS06640;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=SO06_RS06640 NZ_MYDG01000003.1 Protein Homology CDS 104086 105051 . - 0 ID=cds-WP_001278206.1;Parent=gene-SO06_RS06640;Dbxref=GenBank:WP_001278206.1;Name=WP_001278206.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=SO06_RS06640;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001278206.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 105044 105817 . - . ID=gene-SO06_RS06645;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=SO06_RS06645 NZ_MYDG01000003.1 Protein Homology CDS 105044 105817 . - 0 ID=cds-WP_000804536.1;Parent=gene-SO06_RS06645;Dbxref=GenBank:WP_000804536.1;Name=WP_000804536.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=SO06_RS06645;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 106015 106374 . - . ID=gene-SO06_RS06650;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=SO06_RS06650 NZ_MYDG01000003.1 Protein Homology CDS 106015 106374 . - 0 ID=cds-WP_000255198.1;Parent=gene-SO06_RS06650;Dbxref=GenBank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=SO06_RS06650;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 106451 107230 . - . ID=gene-SO06_RS06655;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=SO06_RS06655 NZ_MYDG01000003.1 Protein Homology CDS 106451 107230 . - 0 ID=cds-WP_023232041.1;Parent=gene-SO06_RS06655;Dbxref=GenBank:WP_023232041.1;Name=WP_023232041.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=SO06_RS06655;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_023232041.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 107242 107604 . - . ID=gene-SO06_RS06660;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=SO06_RS06660 NZ_MYDG01000003.1 Protein Homology CDS 107242 107604 . - 0 ID=cds-WP_000111555.1;Parent=gene-SO06_RS06660;Dbxref=GenBank:WP_000111555.1;Name=WP_000111555.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=SO06_RS06660;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000111555.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 107616 108587 . - . ID=gene-SO06_RS06665;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=SO06_RS06665 NZ_MYDG01000003.1 Protein Homology CDS 107616 108587 . - 0 ID=cds-WP_000199039.1;Parent=gene-SO06_RS06665;Dbxref=GenBank:WP_000199039.1;Name=WP_000199039.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=SO06_RS06665;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000199039.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 108584 109147 . - . ID=gene-SO06_RS06670;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=SO06_RS06670 NZ_MYDG01000003.1 Protein Homology CDS 108584 109147 . - 0 ID=cds-WP_000573333.1;Parent=gene-SO06_RS06670;Dbxref=GenBank:WP_000573333.1;Name=WP_000573333.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=SO06_RS06670;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573333.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 109400 110479 . + . ID=gene-SO06_RS06675;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=SO06_RS06675 NZ_MYDG01000003.1 Protein Homology CDS 109400 110479 . + 0 ID=cds-WP_000476822.1;Parent=gene-SO06_RS06675;Dbxref=GenBank:WP_000476822.1;Name=WP_000476822.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=SO06_RS06675;product=lytic murein transglycosylase B;protein_id=WP_000476822.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 110517 110762 . - . ID=gene-SO06_RS25485;Name=SO06_RS25485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25485 NZ_MYDG01000003.1 Protein Homology CDS 110517 110762 . - 0 ID=cds-WP_001519391.1;Parent=gene-SO06_RS25485;Dbxref=GenBank:WP_001519391.1;Name=WP_001519391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=SO06_RS25485;product=hypothetical protein;protein_id=WP_001519391.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 110958 111455 . + . ID=gene-SO06_RS06685;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=SO06_RS06685 NZ_MYDG01000003.1 Protein Homology CDS 110958 111455 . + 0 ID=cds-WP_023232042.1;Parent=gene-SO06_RS06685;Dbxref=GenBank:WP_023232042.1;Name=WP_023232042.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=SO06_RS06685;product=nicotinamide-nucleotide amidase;protein_id=WP_023232042.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 111540 112601 . + . ID=gene-SO06_RS06690;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=SO06_RS06690 NZ_MYDG01000003.1 Protein Homology CDS 111540 112601 . + 0 ID=cds-WP_000963150.1;Parent=gene-SO06_RS06690;Dbxref=GenBank:WP_000963150.1;Name=WP_000963150.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=SO06_RS06690;product=recombinase RecA;protein_id=WP_000963150.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 112718 113218 . + . ID=gene-SO06_RS06695;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=SO06_RS06695 NZ_MYDG01000003.1 Protein Homology CDS 112718 113218 . + 0 ID=cds-WP_001294863.1;Parent=gene-SO06_RS06695;Dbxref=GenBank:WP_001294863.1;Name=WP_001294863.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=SO06_RS06695;product=recombination regulator RecX;protein_id=WP_001294863.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 113454 116084 . + . ID=gene-SO06_RS06705;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=SO06_RS06705 NZ_MYDG01000003.1 Protein Homology CDS 113454 116084 . + 0 ID=cds-WP_023232043.1;Parent=gene-SO06_RS06705;Dbxref=GenBank:WP_023232043.1;Name=WP_023232043.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=SO06_RS06705;product=alanine--tRNA ligase;protein_id=WP_023232043.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 116319 116504 . + . ID=gene-SO06_RS06710;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=SO06_RS06710 NZ_MYDG01000003.1 Protein Homology CDS 116319 116504 . + 0 ID=cds-WP_000906486.1;Parent=gene-SO06_RS06710;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=SO06_RS06710;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 116808 116900 . + . ID=gene-SO06_RS06720;Name=SO06_RS06720;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS06720 NZ_MYDG01000003.1 tRNAscan-SE tRNA 116808 116900 . + . ID=rna-SO06_RS06720;Parent=gene-SO06_RS06720;anticodon=(pos:116842..116844);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS06720;product=tRNA-Ser NZ_MYDG01000003.1 tRNAscan-SE exon 116808 116900 . + . ID=exon-SO06_RS06720-1;Parent=rna-SO06_RS06720;anticodon=(pos:116842..116844);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS06720;product=tRNA-Ser NZ_MYDG01000003.1 RefSeq gene 116904 116980 . + . ID=gene-SO06_RS06725;Name=SO06_RS06725;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS06725 NZ_MYDG01000003.1 tRNAscan-SE tRNA 116904 116980 . + . ID=rna-SO06_RS06725;Parent=gene-SO06_RS06725;anticodon=(pos:116938..116940);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS06725;product=tRNA-Arg NZ_MYDG01000003.1 tRNAscan-SE exon 116904 116980 . + . ID=exon-SO06_RS06725-1;Parent=rna-SO06_RS06725;anticodon=(pos:116938..116940);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS06725;product=tRNA-Arg NZ_MYDG01000003.1 RefSeq gene 117043 117119 . + . ID=gene-SO06_RS06730;Name=SO06_RS06730;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS06730 NZ_MYDG01000003.1 tRNAscan-SE tRNA 117043 117119 . + . ID=rna-SO06_RS06730;Parent=gene-SO06_RS06730;anticodon=(pos:117077..117079);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS06730;product=tRNA-Arg NZ_MYDG01000003.1 tRNAscan-SE exon 117043 117119 . + . ID=exon-SO06_RS06730-1;Parent=rna-SO06_RS06730;anticodon=(pos:117077..117079);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS06730;product=tRNA-Arg NZ_MYDG01000003.1 RefSeq gene 117349 117915 . + . ID=gene-SO06_RS06735;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=SO06_RS06735 NZ_MYDG01000003.1 Protein Homology CDS 117349 117915 . + 0 ID=cds-WP_000271291.1;Parent=gene-SO06_RS06735;Dbxref=GenBank:WP_000271291.1;Name=WP_000271291.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=SO06_RS06735;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000271291.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 117912 118337 . + . ID=gene-SO06_RS06740;Name=SO06_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06740 NZ_MYDG01000003.1 Protein Homology CDS 117912 118337 . + 0 ID=cds-WP_001279499.1;Parent=gene-SO06_RS06740;Dbxref=GenBank:WP_001279499.1;Name=WP_001279499.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=SO06_RS06740;product=YqaA family protein;protein_id=WP_001279499.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 118414 119970 . + . ID=gene-SO06_RS06745;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=SO06_RS06745 NZ_MYDG01000003.1 Protein Homology CDS 118414 119970 . + 0 ID=cds-WP_000611821.1;Parent=gene-SO06_RS06745;Dbxref=GenBank:WP_000611821.1;Name=WP_000611821.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=SO06_RS06745;product=glutamate--cysteine ligase;protein_id=WP_000611821.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 120120 120635 . + . ID=gene-SO06_RS06750;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=SO06_RS06750 NZ_MYDG01000003.1 Protein Homology CDS 120120 120635 . + 0 ID=cds-WP_001130194.1;Parent=gene-SO06_RS06750;Dbxref=GenBank:WP_001130194.1;Name=WP_001130194.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=SO06_RS06750;product=S-ribosylhomocysteine lyase;protein_id=WP_001130194.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 120981 122351 . + . ID=gene-SO06_RS06755;Name=SO06_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06755 NZ_MYDG01000003.1 Protein Homology CDS 120981 122351 . + 0 ID=cds-WP_000645137.1;Parent=gene-SO06_RS06755;Dbxref=GenBank:WP_000645137.1;Name=WP_000645137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=SO06_RS06755;product=carbohydrate porin;protein_id=WP_000645137.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 122400 123938 . - . ID=gene-SO06_RS06760;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=SO06_RS06760 NZ_MYDG01000003.1 Protein Homology CDS 122400 123938 . - 0 ID=cds-WP_001187297.1;Parent=gene-SO06_RS06760;Dbxref=GenBank:WP_001187297.1;Name=WP_001187297.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=SO06_RS06760;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001187297.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 123955 125127 . - . ID=gene-SO06_RS06765;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=SO06_RS06765 NZ_MYDG01000003.1 Protein Homology CDS 123955 125127 . - 0 ID=cds-WP_001275603.1;Parent=gene-SO06_RS06765;Dbxref=GenBank:WP_001275603.1;Name=WP_001275603.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=SO06_RS06765;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275603.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 125254 125784 . - . ID=gene-SO06_RS06770;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=SO06_RS06770 NZ_MYDG01000003.1 Protein Homology CDS 125254 125784 . - 0 ID=cds-WP_000378431.1;Parent=gene-SO06_RS06770;Dbxref=GenBank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=SO06_RS06770;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 126281 127465 . - . ID=gene-SO06_RS06775;Name=SO06_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06775 NZ_MYDG01000003.1 Protein Homology CDS 126281 127465 . - 0 ID=cds-WP_000165769.1;Parent=gene-SO06_RS06775;Dbxref=GenBank:WP_000165769.1;Name=WP_000165769.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=SO06_RS06775;product=MFS transporter;protein_id=WP_000165769.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 127630 128625 . - . ID=gene-SO06_RS06780;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=SO06_RS06780 NZ_MYDG01000003.1 Protein Homology CDS 127630 128625 . - 0 ID=cds-WP_001216613.1;Parent=gene-SO06_RS06780;Dbxref=GenBank:WP_001216613.1;Name=WP_001216613.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=SO06_RS06780;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216613.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 128694 129758 . - . ID=gene-SO06_RS06785;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=SO06_RS06785 NZ_MYDG01000003.1 Protein Homology CDS 128694 129758 . - 0 ID=cds-WP_000775015.1;Parent=gene-SO06_RS06785;Dbxref=GenBank:WP_000775015.1;Name=WP_000775015.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=SO06_RS06785;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000775015.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 129751 130953 . - . ID=gene-SO06_RS06790;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=SO06_RS06790 NZ_MYDG01000003.1 Protein Homology CDS 129751 130953 . - 0 ID=cds-WP_000985529.1;Parent=gene-SO06_RS06790;Dbxref=GenBank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=SO06_RS06790;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 131308 132267 . - . ID=gene-SO06_RS06795;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=SO06_RS06795 NZ_MYDG01000003.1 Protein Homology CDS 131308 132267 . - 0 ID=cds-WP_000777901.1;Parent=gene-SO06_RS06795;Dbxref=GenBank:WP_000777901.1;Name=WP_000777901.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=SO06_RS06795;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777901.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 132278 134422 . - . ID=gene-SO06_RS06800;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=SO06_RS06800 NZ_MYDG01000003.1 Protein Homology CDS 132278 134422 . - 0 ID=cds-WP_024148457.1;Parent=gene-SO06_RS06800;Dbxref=GenBank:WP_024148457.1;Name=WP_024148457.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=SO06_RS06800;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_024148457.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 134395 134805 . - . ID=gene-SO06_RS06805;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=SO06_RS06805 NZ_MYDG01000003.1 Protein Homology CDS 134395 134805 . - 0 ID=cds-WP_001275401.1;Parent=gene-SO06_RS06805;Dbxref=GenBank:WP_001275401.1;Name=WP_001275401.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=SO06_RS06805;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001275401.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 134802 135047 . - . ID=gene-SO06_RS06810;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=SO06_RS06810 NZ_MYDG01000003.1 Protein Homology CDS 134802 135047 . - 0 ID=cds-WP_000028873.1;Parent=gene-SO06_RS06810;Dbxref=GenBank:WP_000028873.1;Name=WP_000028873.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=SO06_RS06810;product=glutaredoxin-like protein NrdH;protein_id=WP_000028873.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 135319 135750 . - . ID=gene-SO06_RS06820;Name=SO06_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06820 NZ_MYDG01000003.1 Protein Homology CDS 135319 135750 . - 0 ID=cds-WP_080150078.1;Parent=gene-SO06_RS06820;Dbxref=GenBank:WP_080150078.1;Name=WP_080150078.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=SO06_RS06820;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_080150078.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 135839 137173 . + . ID=gene-SO06_RS06825;Name=SO06_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06825 NZ_MYDG01000003.1 Protein Homology CDS 135839 137173 . + 0 ID=cds-WP_080204175.1;Parent=gene-SO06_RS06825;Dbxref=GenBank:WP_080204175.1;Name=WP_080204175.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=SO06_RS06825;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_080204175.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 137257 137583 . - . ID=gene-SO06_RS06830;Name=SO06_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06830 NZ_MYDG01000003.1 Protein Homology CDS 137257 137583 . - 0 ID=cds-WP_001650455.1;Parent=gene-SO06_RS06830;Dbxref=GenBank:WP_001650455.1;Name=WP_001650455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=SO06_RS06830;product=DUF883 domain-containing protein;protein_id=WP_001650455.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 137745 138095 . + . ID=gene-SO06_RS06835;Name=SO06_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06835 NZ_MYDG01000003.1 Protein Homology CDS 137745 138095 . + 0 ID=cds-WP_000281305.1;Parent=gene-SO06_RS06835;Dbxref=GenBank:WP_000281305.1;Name=WP_000281305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=SO06_RS06835;product=DUF2002 family protein;protein_id=WP_000281305.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 138130 138579 . - . ID=gene-SO06_RS06840;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=SO06_RS06840 NZ_MYDG01000003.1 Protein Homology CDS 138130 138579 . - 0 ID=cds-WP_000492669.1;Parent=gene-SO06_RS06840;Dbxref=GenBank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=SO06_RS06840;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 139278 139679 . + . ID=gene-SO06_RS06850;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=SO06_RS06850 NZ_MYDG01000003.1 Protein Homology CDS 139278 139679 . + 0 ID=cds-WP_001051100.1;Parent=gene-SO06_RS06850;Dbxref=GenBank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=SO06_RS06850;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 139769 139948 . - . ID=gene-SO06_RS06855;Name=SO06_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06855 NZ_MYDG01000003.1 Protein Homology CDS 139769 139948 . - 0 ID=cds-WP_000494943.1;Parent=gene-SO06_RS06855;Dbxref=GenBank:WP_000494943.1;Name=WP_000494943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=SO06_RS06855;product=hypothetical protein;protein_id=WP_000494943.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 140027 140554 . - . ID=gene-SO06_RS06860;Name=SO06_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06860 NZ_MYDG01000003.1 Protein Homology CDS 140027 140554 . - 0 ID=cds-WP_000022010.1;Parent=gene-SO06_RS06860;Dbxref=GenBank:WP_000022010.1;Name=WP_000022010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=SO06_RS06860;product=rhodanese family protein;protein_id=WP_000022010.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 140564 140863 . - . ID=gene-SO06_RS06865;Name=SO06_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06865 NZ_MYDG01000003.1 Protein Homology CDS 140564 140863 . - 0 ID=cds-WP_000137432.1;Parent=gene-SO06_RS06865;Dbxref=GenBank:WP_000137432.1;Name=WP_000137432.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=SO06_RS06865;product=ArsR/SmtB family transcription factor;protein_id=WP_000137432.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 141046 141204 . + . ID=gene-SO06_RS06870;Name=SO06_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06870 NZ_MYDG01000003.1 Protein Homology CDS 141046 141204 . + 0 ID=cds-WP_000508175.1;Parent=gene-SO06_RS06870;Dbxref=GenBank:WP_000508175.1;Name=WP_000508175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=SO06_RS06870;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 141304 141753 . + . ID=gene-SO06_RS06875;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=SO06_RS06875 NZ_MYDG01000003.1 Protein Homology CDS 141304 141753 . + 0 ID=cds-WP_000522406.1;Parent=gene-SO06_RS06875;Dbxref=GenBank:WP_000522406.1;Name=WP_000522406.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=SO06_RS06875;product=peptidoglycan-binding protein LysM;protein_id=WP_000522406.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 141775 142452 . - . ID=gene-SO06_RS06880;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=SO06_RS06880 NZ_MYDG01000003.1 Protein Homology CDS 141775 142452 . - 0 ID=cds-WP_000126152.1;Parent=gene-SO06_RS06880;Dbxref=GenBank:WP_000126152.1;Name=WP_000126152.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=SO06_RS06880;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126152.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 142494 143894 . - . ID=gene-SO06_RS06885;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=SO06_RS06885 NZ_MYDG01000003.1 Protein Homology CDS 142494 143894 . - 0 ID=cds-WP_000531282.1;Parent=gene-SO06_RS06885;Dbxref=GenBank:WP_000531282.1;Name=WP_000531282.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=SO06_RS06885;product=GABA permease;protein_id=WP_000531282.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 144024 145307 . - . ID=gene-SO06_RS06890;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=SO06_RS06890 NZ_MYDG01000003.1 Protein Homology CDS 144024 145307 . - 0 ID=cds-WP_080204176.1;Parent=gene-SO06_RS06890;Dbxref=GenBank:WP_080204176.1;Name=WP_080204176.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=SO06_RS06890;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_080204176.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 145322 146770 . - . ID=gene-SO06_RS06895;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=SO06_RS06895 NZ_MYDG01000003.1 Protein Homology CDS 145322 146770 . - 0 ID=cds-WP_001176523.1;Parent=gene-SO06_RS06895;Dbxref=GenBank:WP_001176523.1;Name=WP_001176523.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=SO06_RS06895;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_001176523.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 146792 148060 . - . ID=gene-SO06_RS06900;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=SO06_RS06900 NZ_MYDG01000003.1 Protein Homology CDS 146792 148060 . - 0 ID=cds-WP_063808936.1;Parent=gene-SO06_RS06900;Dbxref=GenBank:WP_063808936.1;Name=WP_063808936.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=SO06_RS06900;product=L-2-hydroxyglutarate oxidase;protein_id=WP_063808936.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 148086 149063 . - . ID=gene-SO06_RS06905;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=SO06_RS06905 NZ_MYDG01000003.1 Protein Homology CDS 148086 149063 . - 0 ID=cds-WP_000993092.1;Parent=gene-SO06_RS06905;Dbxref=GenBank:WP_000993092.1;Name=WP_000993092.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=SO06_RS06905;product=glutarate dioxygenase GlaH;protein_id=WP_000993092.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 149366 150880 . - . ID=gene-SO06_RS06910;Name=SO06_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06910 NZ_MYDG01000003.1 Protein Homology CDS 149366 150880 . - 0 ID=cds-WP_000382034.1;Parent=gene-SO06_RS06910;Dbxref=GenBank:WP_000382034.1;Name=WP_000382034.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=SO06_RS06910;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382034.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 150891 151325 . - . ID=gene-SO06_RS06915;Name=SO06_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06915 NZ_MYDG01000003.1 Protein Homology CDS 150891 151325 . - 0 ID=cds-WP_001574835.1;Parent=gene-SO06_RS06915;Dbxref=GenBank:WP_001574835.1;Name=WP_001574835.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=SO06_RS06915;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_001574835.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 151337 152314 . - . ID=gene-SO06_RS06920;Name=SO06_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06920 NZ_MYDG01000003.1 Protein Homology CDS 151337 152314 . - 0 ID=cds-WP_080204177.1;Parent=gene-SO06_RS06920;Dbxref=GenBank:WP_080204177.1;Name=WP_080204177.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=SO06_RS06920;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_080204177.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 152469 153143 . + . ID=gene-SO06_RS06925;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=SO06_RS06925 NZ_MYDG01000003.1 Protein Homology CDS 152469 153143 . + 0 ID=cds-WP_001237934.1;Parent=gene-SO06_RS06925;Dbxref=GenBank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=SO06_RS06925;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 153130 154545 . + . ID=gene-SO06_RS06930;Name=SO06_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06930 NZ_MYDG01000003.1 Protein Homology CDS 153130 154545 . + 0 ID=cds-WP_080204178.1;Parent=gene-SO06_RS06930;Dbxref=GenBank:WP_080204178.1;Name=WP_080204178.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=SO06_RS06930;product=sensor histidine kinase;protein_id=WP_080204178.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 154677 155690 . + . ID=gene-SO06_RS06935;Name=SO06_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06935 NZ_MYDG01000003.1 Protein Homology CDS 154677 155690 . + 0 ID=cds-WP_001059351.1;Parent=gene-SO06_RS06935;Dbxref=GenBank:WP_001059351.1;Name=WP_001059351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=SO06_RS06935;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_001059351.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 156412 157308 . - . ID=gene-SO06_RS06940;Name=SO06_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06940 NZ_MYDG01000003.1 Protein Homology CDS 156412 157308 . - 0 ID=cds-WP_080204179.1;Parent=gene-SO06_RS06940;Dbxref=GenBank:WP_080204179.1;Name=WP_080204179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=SO06_RS06940;product=antimicrobial resistance protein Mig-14;protein_id=WP_080204179.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 157601 158530 . - . ID=gene-SO06_RS06950;Name=SO06_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06950 NZ_MYDG01000003.1 Protein Homology CDS 157601 158530 . - 0 ID=cds-WP_023258686.1;Parent=gene-SO06_RS06950;Dbxref=GenBank:WP_023258686.1;Name=WP_023258686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=SO06_RS06950;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_023258686.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 159049 160101 . + . ID=gene-SO06_RS06955;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=SO06_RS06955 NZ_MYDG01000003.1 Protein Homology CDS 159049 160101 . + 0 ID=cds-WP_080204180.1;Parent=gene-SO06_RS06955;Dbxref=GenBank:WP_080204180.1;Name=WP_080204180.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=SO06_RS06955;product=type III secretion system effector PipB2;protein_id=WP_080204180.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 160276 160608 . + . ID=gene-SO06_RS06960;Name=SO06_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06960 NZ_MYDG01000003.1 Protein Homology CDS 160276 160608 . + 0 ID=cds-WP_079983905.1;Parent=gene-SO06_RS06960;Dbxref=GenBank:WP_079983905.1;Name=WP_079983905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=SO06_RS06960;product=hypothetical protein;protein_id=WP_079983905.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 161138 163312 . + . ID=gene-SO06_RS06970;Name=SO06_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06970 NZ_MYDG01000003.1 Protein Homology CDS 161138 163312 . + 0 ID=cds-WP_275086910.1;Parent=gene-SO06_RS06970;Dbxref=GenBank:WP_275086910.1;Name=WP_275086910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=SO06_RS06970;product=TonB-dependent siderophore receptor;protein_id=WP_275086910.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 163354 164289 . - . ID=gene-SO06_RS06975;Name=SO06_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06975 NZ_MYDG01000003.1 Protein Homology CDS 163354 164289 . - 0 ID=cds-WP_023231819.1;Parent=gene-SO06_RS06975;Dbxref=GenBank:WP_023231819.1;Name=WP_023231819.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=SO06_RS06975;product=alpha/beta hydrolase;protein_id=WP_023231819.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 164321 165565 . - . ID=gene-SO06_RS06980;Name=SO06_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS06980 NZ_MYDG01000003.1 Protein Homology CDS 164321 165565 . - 0 ID=cds-WP_023231820.1;Parent=gene-SO06_RS06980;Dbxref=GenBank:WP_023231820.1;Name=WP_023231820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=SO06_RS06980;product=esterase family protein;protein_id=WP_023231820.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 165675 169331 . - . ID=gene-SO06_RS06985;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=SO06_RS06985 NZ_MYDG01000003.1 Protein Homology CDS 165675 169331 . - 0 ID=cds-WP_080204181.1;Parent=gene-SO06_RS06985;Dbxref=GenBank:WP_080204181.1;Name=WP_080204181.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=SO06_RS06985;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_080204181.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 169412 170527 . - . ID=gene-SO06_RS06990;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=SO06_RS06990 NZ_MYDG01000003.1 Protein Homology CDS 169412 170527 . - 0 ID=cds-WP_023231822.1;Parent=gene-SO06_RS06990;Dbxref=GenBank:WP_023231822.1;Name=WP_023231822.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=SO06_RS06990;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_023231822.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 171483 175259 . + . ID=gene-SO06_RS07005;Name=SO06_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07005 NZ_MYDG01000003.1 GeneMarkS-2+ CDS 171483 175259 . + 0 ID=cds-WP_023231823.1;Parent=gene-SO06_RS07005;Dbxref=GenBank:WP_023231823.1;Name=WP_023231823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS07005;product=hypothetical protein;protein_id=WP_023231823.1;transl_table=11 NZ_MYDG01000003.1 RefSeq pseudogene 175476 175738 . + . ID=gene-SO06_RS25490;Name=SO06_RS25490;end_range=175738,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25490;partial=true;pseudo=true NZ_MYDG01000003.1 Protein Homology CDS 175476 175738 . + 0 ID=cds-SO06_RS25490;Parent=gene-SO06_RS25490;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=175738,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147524.1;locus_tag=SO06_RS25490;partial=true;product=phage polarity suppression protein;pseudo=true;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 175853 177262 . - . ID=gene-SO06_RS07015;Name=SO06_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07015 NZ_MYDG01000003.1 Protein Homology CDS 175853 177262 . - 0 ID=cds-WP_198661948.1;Parent=gene-SO06_RS07015;Dbxref=GenBank:WP_198661948.1;Name=WP_198661948.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022062.6;locus_tag=SO06_RS07015;product=AIPR family protein;protein_id=WP_198661948.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 177555 178751 . - . ID=gene-SO06_RS07020;Name=SO06_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07020 NZ_MYDG01000003.1 Protein Homology CDS 177555 178751 . - 0 ID=cds-WP_023231826.1;Parent=gene-SO06_RS07020;Dbxref=GenBank:WP_023231826.1;Name=WP_023231826.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000124730.1;locus_tag=SO06_RS07020;product=integrase domain-containing protein;protein_id=WP_023231826.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 178991 179803 . - . ID=gene-SO06_RS07025;Name=SO06_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07025 NZ_MYDG01000003.1 GeneMarkS-2+ CDS 178991 179803 . - 0 ID=cds-WP_052895176.1;Parent=gene-SO06_RS07025;Dbxref=GenBank:WP_052895176.1;Name=WP_052895176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS07025;product=hypothetical protein;protein_id=WP_052895176.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 179842 181017 . - . ID=gene-SO06_RS07030;Name=SO06_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07030 NZ_MYDG01000003.1 Protein Homology CDS 179842 181017 . - 0 ID=cds-WP_048348949.1;Parent=gene-SO06_RS07030;Dbxref=GenBank:WP_048348949.1;Name=WP_048348949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000531801.1;locus_tag=SO06_RS07030;product=site-specific integrase;protein_id=WP_048348949.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 180978 181184 . - . ID=gene-SO06_RS07035;Name=SO06_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07035 NZ_MYDG01000003.1 Protein Homology CDS 180978 181184 . - 0 ID=cds-WP_024145650.1;Parent=gene-SO06_RS07035;Dbxref=GenBank:WP_024145650.1;Name=WP_024145650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001440432.1;locus_tag=SO06_RS07035;product=hypothetical protein;protein_id=WP_024145650.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 181226 182092 . - . ID=gene-SO06_RS07040;Name=SO06_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07040 NZ_MYDG01000003.1 Protein Homology CDS 181226 182092 . - 0 ID=cds-WP_048348948.1;Parent=gene-SO06_RS07040;Dbxref=GenBank:WP_048348948.1;Name=WP_048348948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075213.1;locus_tag=SO06_RS07040;product=hypothetical protein;protein_id=WP_048348948.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 182201 182725 . - . ID=gene-SO06_RS07045;Name=SO06_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07045 NZ_MYDG01000003.1 Protein Homology CDS 182201 182725 . - 0 ID=cds-WP_042826885.1;Parent=gene-SO06_RS07045;Dbxref=GenBank:WP_042826885.1;Name=WP_042826885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008351.1;locus_tag=SO06_RS07045;product=hypothetical protein;protein_id=WP_042826885.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 182862 183689 . - . ID=gene-SO06_RS07050;Name=SO06_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07050 NZ_MYDG01000003.1 Protein Homology CDS 182862 183689 . - 0 ID=cds-WP_048348947.1;Parent=gene-SO06_RS07050;Dbxref=GenBank:WP_048348947.1;Name=WP_048348947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080411.1;locus_tag=SO06_RS07050;product=YfdQ family protein;protein_id=WP_048348947.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 183747 184118 . - . ID=gene-SO06_RS07055;Name=SO06_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07055 NZ_MYDG01000003.1 Protein Homology CDS 183747 184118 . - 0 ID=cds-WP_000997190.1;Parent=gene-SO06_RS07055;Dbxref=GenBank:WP_000997190.1;Name=WP_000997190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668372.1;locus_tag=SO06_RS07055;product=hypothetical protein;protein_id=WP_000997190.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 184933 185628 . - . ID=gene-SO06_RS07065;Name=SO06_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07065 NZ_MYDG01000003.1 Protein Homology CDS 184933 185628 . - 0 ID=cds-WP_048348946.1;Parent=gene-SO06_RS07065;Dbxref=GenBank:WP_048348946.1;Name=WP_048348946.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001358750.1;locus_tag=SO06_RS07065;product=XRE family transcriptional regulator;protein_id=WP_048348946.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 185726 185950 . + . ID=gene-SO06_RS07075;Name=SO06_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07075 NZ_MYDG01000003.1 Protein Homology CDS 185726 185950 . + 0 ID=cds-WP_001191666.1;Parent=gene-SO06_RS07075;Dbxref=GenBank:WP_001191666.1;Name=WP_001191666.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191959.1;locus_tag=SO06_RS07075;product=helix-turn-helix domain-containing protein;protein_id=WP_001191666.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 185979 186533 . + . ID=gene-SO06_RS07080;Name=SO06_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07080 NZ_MYDG01000003.1 Protein Homology CDS 185979 186533 . + 0 ID=cds-WP_048348945.1;Parent=gene-SO06_RS07080;Dbxref=GenBank:WP_048348945.1;Name=WP_048348945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509732.1;locus_tag=SO06_RS07080;product=YmfL family putative regulatory protein;protein_id=WP_048348945.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 186530 187672 . + . ID=gene-SO06_RS07085;Name=SO06_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07085 NZ_MYDG01000003.1 Protein Homology CDS 186530 187672 . + 0 ID=cds-WP_048348944.1;Parent=gene-SO06_RS07085;Dbxref=GenBank:WP_048348944.1;Name=WP_048348944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087306.1;locus_tag=SO06_RS07085;product=Rha family phage regulatory protein;protein_id=WP_048348944.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 187669 187893 . + . ID=gene-SO06_RS07090;Name=SO06_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07090 NZ_MYDG01000003.1 Protein Homology CDS 187669 187893 . + 0 ID=cds-WP_000620702.1;Parent=gene-SO06_RS07090;Dbxref=GenBank:WP_000620702.1;Name=WP_000620702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401086.1;locus_tag=SO06_RS07090;product=hypothetical protein;protein_id=WP_000620702.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 187890 188864 . + . ID=gene-SO06_RS07095;Name=SO06_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07095 NZ_MYDG01000003.1 Protein Homology CDS 187890 188864 . + 0 ID=cds-WP_048348943.1;Parent=gene-SO06_RS07095;Dbxref=GenBank:WP_048348943.1;Name=WP_048348943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006669533.1;locus_tag=SO06_RS07095;product=conserved phage C-terminal domain-containing protein;protein_id=WP_048348943.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 188861 189334 . + . ID=gene-SO06_RS07100;Name=SO06_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07100 NZ_MYDG01000003.1 Protein Homology CDS 188861 189334 . + 0 ID=cds-WP_000054227.1;Parent=gene-SO06_RS07100;Dbxref=GenBank:WP_000054227.1;Name=WP_000054227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000054228.1;locus_tag=SO06_RS07100;product=PerC family transcriptional regulator;protein_id=WP_000054227.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 189331 190212 . + . ID=gene-SO06_RS07105;Name=SO06_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07105 NZ_MYDG01000003.1 Protein Homology CDS 189331 190212 . + 0 ID=cds-WP_052895178.1;Parent=gene-SO06_RS07105;Dbxref=GenBank:WP_052895178.1;Name=WP_052895178.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200163.1;locus_tag=SO06_RS07105;product=DNA adenine methylase;protein_id=WP_052895178.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 190221 190610 . + . ID=gene-SO06_RS07110;Name=SO06_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07110 NZ_MYDG01000003.1 Protein Homology CDS 190221 190610 . + 0 ID=cds-WP_000779148.1;Parent=gene-SO06_RS07110;Dbxref=GenBank:WP_000779148.1;Name=WP_000779148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767134.1;locus_tag=SO06_RS07110;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_000779148.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 190627 191487 . + . ID=gene-SO06_RS07115;Name=SO06_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07115 NZ_MYDG01000003.1 Protein Homology CDS 190627 191487 . + 0 ID=cds-WP_001061459.1;Parent=gene-SO06_RS07115;Dbxref=GenBank:WP_001061459.1;Name=WP_001061459.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061457.1;locus_tag=SO06_RS07115;product=KilA-N domain-containing protein;protein_id=WP_001061459.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 191495 192484 . + . ID=gene-SO06_RS07120;Name=SO06_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07120 NZ_MYDG01000003.1 Protein Homology CDS 191495 192484 . + 0 ID=cds-WP_048348961.1;Parent=gene-SO06_RS07120;Dbxref=GenBank:WP_048348961.1;Name=WP_048348961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461183.1;locus_tag=SO06_RS07120;product=DUF968 domain-containing protein;protein_id=WP_048348961.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 192499 192867 . + . ID=gene-SO06_RS07125;Name=SO06_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07125 NZ_MYDG01000003.1 Protein Homology CDS 192499 192867 . + 0 ID=cds-WP_077248400.1;Parent=gene-SO06_RS07125;Dbxref=GenBank:WP_077248400.1;Name=WP_077248400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461182.1;locus_tag=SO06_RS07125;product=antiterminator Q family protein;protein_id=WP_077248400.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 192896 194227 . - . ID=gene-SO06_RS07130;Name=SO06_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07130 NZ_MYDG01000003.1 Protein Homology CDS 192896 194227 . - 0 ID=cds-WP_023231269.1;Parent=gene-SO06_RS07130;Dbxref=GenBank:WP_023231269.1;Name=WP_023231269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461181.1;locus_tag=SO06_RS07130;product=KAP family NTPase;protein_id=WP_023231269.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 194524 194859 . + . ID=gene-SO06_RS07135;Name=SO06_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07135 NZ_MYDG01000003.1 Protein Homology CDS 194524 194859 . + 0 ID=cds-WP_023219695.1;Parent=gene-SO06_RS07135;Dbxref=GenBank:WP_023219695.1;Name=WP_023219695.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120500.1;locus_tag=SO06_RS07135;product=phage holin%2C lambda family;protein_id=WP_023219695.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 194863 195339 . + . ID=gene-SO06_RS07140;Name=SO06_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07140 NZ_MYDG01000003.1 Protein Homology CDS 194863 195339 . + 0 ID=cds-WP_023231272.1;Parent=gene-SO06_RS07140;Dbxref=GenBank:WP_023231272.1;Name=WP_023231272.1;Ontology_term=GO:0005975,GO:0003796,GO:0004553;gbkey=CDS;go_function=lysozyme activity|0003796||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159277.1;locus_tag=SO06_RS07140;product=glycoside hydrolase family 24 protein;protein_id=WP_023231272.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 195323 195757 . + . ID=gene-SO06_RS07145;Name=SO06_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07145 NZ_MYDG01000003.1 Protein Homology CDS 195323 195757 . + 0 ID=cds-WP_042826857.1;Parent=gene-SO06_RS07145;Dbxref=GenBank:WP_042826857.1;Name=WP_042826857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778467.1;locus_tag=SO06_RS07145;product=DUF2570 domain-containing protein;protein_id=WP_042826857.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 195687 195848 . + . ID=gene-SO06_RS25775;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=SO06_RS25775 NZ_MYDG01000003.1 Protein Homology CDS 195687 195848 . + 0 ID=cds-WP_420066265.1;Parent=gene-SO06_RS25775;Dbxref=GenBank:WP_420066265.1;Name=WP_420066265.1;gbkey=CDS;gene=lysC;inference=COORDINATES: protein motif:HMM:NF048206.1;locus_tag=SO06_RS25775;product=Rz1-like lysis system protein LysC;protein_id=WP_420066265.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 195911 196399 . + . ID=gene-SO06_RS07150;Name=SO06_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07150 NZ_MYDG01000003.1 GeneMarkS-2+ CDS 195911 196399 . + 0 ID=cds-WP_024148414.1;Parent=gene-SO06_RS07150;Dbxref=GenBank:WP_024148414.1;Name=WP_024148414.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS07150;product=hypothetical protein;protein_id=WP_024148414.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 196446 196796 . + . ID=gene-SO06_RS07155;Name=SO06_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07155 NZ_MYDG01000003.1 Protein Homology CDS 196446 196796 . + 0 ID=cds-WP_023231277.1;Parent=gene-SO06_RS07155;Dbxref=GenBank:WP_023231277.1;Name=WP_023231277.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135225.1;locus_tag=SO06_RS07155;product=HNH endonuclease;protein_id=WP_023231277.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 196921 197415 . + . ID=gene-SO06_RS07160;Name=SO06_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07160 NZ_MYDG01000003.1 Protein Homology CDS 196921 197415 . + 0 ID=cds-WP_023231279.1;Parent=gene-SO06_RS07160;Dbxref=GenBank:WP_023231279.1;Name=WP_023231279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016249564.1;locus_tag=SO06_RS07160;product=phage terminase small subunit P27 family;protein_id=WP_023231279.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 197412 199145 . + . ID=gene-SO06_RS07165;Name=SO06_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07165 NZ_MYDG01000003.1 Protein Homology CDS 197412 199145 . + 0 ID=cds-WP_039501161.1;Parent=gene-SO06_RS07165;Dbxref=GenBank:WP_039501161.1;Name=WP_039501161.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088170.1;locus_tag=SO06_RS07165;product=terminase large subunit;protein_id=WP_039501161.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 199157 199339 . + . ID=gene-SO06_RS07170;Name=ymfR;gbkey=Gene;gene=ymfR;gene_biotype=protein_coding;locus_tag=SO06_RS07170 NZ_MYDG01000003.1 Protein Homology CDS 199157 199339 . + 0 ID=cds-WP_000605609.1;Parent=gene-SO06_RS07170;Dbxref=GenBank:WP_000605609.1;Name=WP_000605609.1;gbkey=CDS;gene=ymfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415668.1;locus_tag=SO06_RS07170;product=protein YmfR;protein_id=WP_000605609.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 199339 200580 . + . ID=gene-SO06_RS07175;Name=SO06_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07175 NZ_MYDG01000003.1 Protein Homology CDS 199339 200580 . + 0 ID=cds-WP_023231283.1;Parent=gene-SO06_RS07175;Dbxref=GenBank:WP_023231283.1;Name=WP_023231283.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000466237.1;locus_tag=SO06_RS07175;product=phage portal protein;protein_id=WP_023231283.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 200558 201208 . + . ID=gene-SO06_RS07180;Name=SO06_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07180 NZ_MYDG01000003.1 Protein Homology CDS 200558 201208 . + 0 ID=cds-WP_024148415.1;Parent=gene-SO06_RS07180;Dbxref=GenBank:WP_024148415.1;Name=WP_024148415.1;Ontology_term=GO:0019068,GO:0019082,GO:0005198,GO:0008233;gbkey=CDS;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA,viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193639.1;locus_tag=SO06_RS07180;product=HK97 family phage prohead protease;protein_id=WP_024148415.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 201223 202428 . + . ID=gene-SO06_RS07185;Name=SO06_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07185 NZ_MYDG01000003.1 Protein Homology CDS 201223 202428 . + 0 ID=cds-WP_023231285.1;Parent=gene-SO06_RS07185;Dbxref=GenBank:WP_023231285.1;Name=WP_023231285.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559678.1;locus_tag=SO06_RS07185;product=phage major capsid protein;protein_id=WP_023231285.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 202479 202679 . + . ID=gene-SO06_RS07190;Name=SO06_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07190 NZ_MYDG01000003.1 Protein Homology CDS 202479 202679 . + 0 ID=cds-WP_000601353.1;Parent=gene-SO06_RS07190;Dbxref=GenBank:WP_000601353.1;Name=WP_000601353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001735262.1;locus_tag=SO06_RS07190;product=hypothetical protein;protein_id=WP_000601353.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 202682 203005 . + . ID=gene-SO06_RS07195;Name=SO06_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07195 NZ_MYDG01000003.1 Protein Homology CDS 202682 203005 . + 0 ID=cds-WP_000927378.1;Parent=gene-SO06_RS07195;Dbxref=GenBank:WP_000927378.1;Name=WP_000927378.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001492759.1;locus_tag=SO06_RS07195;product=head-tail connector protein;protein_id=WP_000927378.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 203002 203406 . + . ID=gene-SO06_RS07200;Name=SO06_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07200 NZ_MYDG01000003.1 Protein Homology CDS 203002 203406 . + 0 ID=cds-WP_039501164.1;Parent=gene-SO06_RS07200;Dbxref=GenBank:WP_039501164.1;Name=WP_039501164.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000776847.1;locus_tag=SO06_RS07200;product=phage head closure protein;protein_id=WP_039501164.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 203378 203890 . + . ID=gene-SO06_RS07205;Name=SO06_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07205 NZ_MYDG01000003.1 Protein Homology CDS 203378 203890 . + 0 ID=cds-WP_048348920.1;Parent=gene-SO06_RS07205;Dbxref=GenBank:WP_048348920.1;Name=WP_048348920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135699.1;locus_tag=SO06_RS07205;product=hypothetical protein;protein_id=WP_048348920.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 203887 204447 . + . ID=gene-SO06_RS07210;Name=SO06_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07210 NZ_MYDG01000003.1 Protein Homology CDS 203887 204447 . + 0 ID=cds-WP_023231767.1;Parent=gene-SO06_RS07210;Dbxref=GenBank:WP_023231767.1;Name=WP_023231767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000779217.1;locus_tag=SO06_RS07210;product=phage tail terminator protein;protein_id=WP_023231767.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 204451 204615 . + . ID=gene-SO06_RS07215;Name=SO06_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07215 NZ_MYDG01000003.1 Protein Homology CDS 204451 204615 . + 0 ID=cds-WP_000497739.1;Parent=gene-SO06_RS07215;Dbxref=GenBank:WP_000497739.1;Name=WP_000497739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497754.1;locus_tag=SO06_RS07215;product=DUF2635 domain-containing protein;protein_id=WP_000497739.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 204605 206101 . + . ID=gene-SO06_RS07220;Name=SO06_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07220 NZ_MYDG01000003.1 Protein Homology CDS 204605 206101 . + 0 ID=cds-WP_057520465.1;Parent=gene-SO06_RS07220;Dbxref=GenBank:WP_057520465.1;Name=WP_057520465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707867.1;locus_tag=SO06_RS07220;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_057520465.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 206101 206457 . + . ID=gene-SO06_RS07225;Name=SO06_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07225 NZ_MYDG01000003.1 Protein Homology CDS 206101 206457 . + 0 ID=cds-WP_000515952.1;Parent=gene-SO06_RS07225;Dbxref=GenBank:WP_000515952.1;Name=WP_000515952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707866.1;locus_tag=SO06_RS07225;product=phage tail tube protein;protein_id=WP_000515952.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 206454 206780 . + . ID=gene-SO06_RS07230;Name=SO06_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07230 NZ_MYDG01000003.1 Protein Homology CDS 206454 206780 . + 0 ID=cds-WP_000588851.1;Parent=gene-SO06_RS07230;Dbxref=GenBank:WP_000588851.1;Name=WP_000588851.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588853.1;locus_tag=SO06_RS07230;product=phage tail assembly protein;protein_id=WP_000588851.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 206865 208793 . + . ID=gene-SO06_RS07235;Name=SO06_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07235 NZ_MYDG01000003.1 Protein Homology CDS 206865 208793 . + 0 ID=cds-WP_031608922.1;Parent=gene-SO06_RS07235;Dbxref=GenBank:WP_031608922.1;Name=WP_031608922.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015968581.1;locus_tag=SO06_RS07235;product=phage tail tape measure protein;protein_id=WP_031608922.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 208827 210167 . + . ID=gene-SO06_RS07240;Name=SO06_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07240 NZ_MYDG01000003.1 Protein Homology CDS 208827 210167 . + 0 ID=cds-WP_000863824.1;Parent=gene-SO06_RS07240;Dbxref=GenBank:WP_000863824.1;Name=WP_000863824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742721.1;locus_tag=SO06_RS07240;product=DNA circularization protein;protein_id=WP_000863824.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 210164 211222 . + . ID=gene-SO06_RS07245;Name=SO06_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07245 NZ_MYDG01000003.1 Protein Homology CDS 210164 211222 . + 0 ID=cds-WP_001066633.1;Parent=gene-SO06_RS07245;Dbxref=GenBank:WP_001066633.1;Name=WP_001066633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066639.1;locus_tag=SO06_RS07245;product=phage baseplate assembly protein;protein_id=WP_001066633.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 211222 211755 . + . ID=gene-SO06_RS07250;Name=SO06_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07250 NZ_MYDG01000003.1 Protein Homology CDS 211222 211755 . + 0 ID=cds-WP_001273652.1;Parent=gene-SO06_RS07250;Dbxref=GenBank:WP_001273652.1;Name=WP_001273652.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273649.1;locus_tag=SO06_RS07250;product=phage baseplate assembly protein V;protein_id=WP_001273652.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 211760 212173 . + . ID=gene-SO06_RS07255;Name=SO06_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07255 NZ_MYDG01000003.1 Protein Homology CDS 211760 212173 . + 0 ID=cds-WP_000605051.1;Parent=gene-SO06_RS07255;Dbxref=GenBank:WP_000605051.1;Name=WP_000605051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605050.1;locus_tag=SO06_RS07255;product=phage GP46 family protein;protein_id=WP_000605051.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 212166 213245 . + . ID=gene-SO06_RS07260;Name=SO06_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07260 NZ_MYDG01000003.1 Protein Homology CDS 212166 213245 . + 0 ID=cds-WP_000785582.1;Parent=gene-SO06_RS07260;Dbxref=GenBank:WP_000785582.1;Name=WP_000785582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000785580.1;locus_tag=SO06_RS07260;product=baseplate J/gp47 family protein;protein_id=WP_000785582.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 213248 213835 . + . ID=gene-SO06_RS07265;Name=SO06_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07265 NZ_MYDG01000003.1 Protein Homology CDS 213248 213835 . + 0 ID=cds-WP_001207833.1;Parent=gene-SO06_RS07265;Dbxref=GenBank:WP_001207833.1;Name=WP_001207833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001207831.1;locus_tag=SO06_RS07265;product=YmfQ family protein;protein_id=WP_001207833.1;transl_table=11 NZ_MYDG01000003.1 RefSeq pseudogene 214122 214997 . + . ID=gene-SO06_RS07270;Name=SO06_RS07270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS07270;partial=true;pseudo=true;start_range=.,214122 NZ_MYDG01000003.1 Protein Homology CDS 214122 214997 . + 0 ID=cds-SO06_RS07270;Parent=gene-SO06_RS07270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461524.1;locus_tag=SO06_RS07270;partial=true;product=phage tail protein;pseudo=true;start_range=.,214122;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 214994 215818 . + . ID=gene-SO06_RS07275;Name=SO06_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07275 NZ_MYDG01000003.1 Protein Homology CDS 214994 215818 . + 0 ID=cds-WP_000593427.1;Parent=gene-SO06_RS07275;Dbxref=GenBank:WP_000593427.1;Name=WP_000593427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461523.1;locus_tag=SO06_RS07275;product=macro domain-containing protein;protein_id=WP_000593427.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 215808 216377 . + . ID=gene-SO06_RS07280;Name=SO06_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07280 NZ_MYDG01000003.1 Protein Homology CDS 215808 216377 . + 0 ID=cds-WP_000143151.1;Parent=gene-SO06_RS07280;Dbxref=GenBank:WP_000143151.1;Name=WP_000143151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525039.1;locus_tag=SO06_RS07280;product=tail fiber assembly protein;protein_id=WP_000143151.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 216704 217624 . - . ID=gene-SO06_RS07285;Name=SO06_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07285 NZ_MYDG01000003.1 Protein Homology CDS 216704 217624 . - 0 ID=cds-WP_001072751.1;Parent=gene-SO06_RS07285;Dbxref=GenBank:WP_001072751.1;Name=WP_001072751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610639.1;locus_tag=SO06_RS07285;product=AbiTii domain-containing protein;protein_id=WP_001072751.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 217792 218154 . - . ID=gene-SO06_RS07290;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=SO06_RS07290 NZ_MYDG01000003.1 cmsearch tmRNA 217792 218154 . - . ID=rna-SO06_RS07290;Parent=gene-SO06_RS07290;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS07290;product=transfer-messenger RNA NZ_MYDG01000003.1 cmsearch exon 217792 218154 . - . ID=exon-SO06_RS07290-1;Parent=rna-SO06_RS07290;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS07290;product=transfer-messenger RNA NZ_MYDG01000003.1 RefSeq gene 218226 219389 . - . ID=gene-SO06_RS07295;Name=SO06_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07295 NZ_MYDG01000003.1 Protein Homology CDS 218226 219389 . - 0 ID=cds-WP_000342601.1;Parent=gene-SO06_RS07295;Dbxref=GenBank:WP_000342601.1;Name=WP_000342601.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=SO06_RS07295;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_000342601.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 219397 221577 . - . ID=gene-SO06_RS07300;Name=SO06_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07300 NZ_MYDG01000003.1 Protein Homology CDS 219397 221577 . - 0 ID=cds-WP_023231955.1;Parent=gene-SO06_RS07300;Dbxref=GenBank:WP_023231955.1;Name=WP_023231955.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=SO06_RS07300;product=type I secretion system permease/ATPase;protein_id=WP_023231955.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 221574 222983 . - . ID=gene-SO06_RS07305;Name=SO06_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07305 NZ_MYDG01000003.1 Protein Homology CDS 221574 222983 . - 0 ID=cds-WP_023231956.1;Parent=gene-SO06_RS07305;Dbxref=GenBank:WP_023231956.1;Name=WP_023231956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=SO06_RS07305;product=TolC family outer membrane protein;protein_id=WP_023231956.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 223048 234522 . - . ID=gene-SO06_RS07310;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=SO06_RS07310 NZ_MYDG01000003.1 Protein Homology CDS 223048 234522 . - 0 ID=cds-WP_023231957.1;Parent=gene-SO06_RS07310;Dbxref=GenBank:WP_023231957.1;Name=WP_023231957.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=SO06_RS07310;product=biofilm-associated protein BapA;protein_id=WP_023231957.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 235137 235619 . - . ID=gene-SO06_RS07315;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=SO06_RS07315 NZ_MYDG01000003.1 Protein Homology CDS 235137 235619 . - 0 ID=cds-WP_001518569.1;Parent=gene-SO06_RS07315;Dbxref=GenBank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=SO06_RS07315;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 235808 236245 . + . ID=gene-SO06_RS07320;Name=SO06_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07320 NZ_MYDG01000003.1 Protein Homology CDS 235808 236245 . + 0 ID=cds-WP_001543334.1;Parent=gene-SO06_RS07320;Dbxref=GenBank:WP_001543334.1;Name=WP_001543334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=SO06_RS07320;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_001543334.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 236235 236525 . + . ID=gene-SO06_RS07325;Name=SO06_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07325 NZ_MYDG01000003.1 Protein Homology CDS 236235 236525 . + 0 ID=cds-WP_001112990.1;Parent=gene-SO06_RS07325;Dbxref=GenBank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=SO06_RS07325;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 236691 237029 . - . ID=gene-SO06_RS07330;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=SO06_RS07330 NZ_MYDG01000003.1 Protein Homology CDS 236691 237029 . - 0 ID=cds-WP_001203445.1;Parent=gene-SO06_RS07330;Dbxref=GenBank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=SO06_RS07330;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 237178 238839 . - . ID=gene-SO06_RS07335;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=SO06_RS07335 NZ_MYDG01000003.1 Protein Homology CDS 237178 238839 . - 0 ID=cds-WP_023231958.1;Parent=gene-SO06_RS07335;Dbxref=GenBank:WP_023231958.1;Name=WP_023231958.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=SO06_RS07335;product=DNA repair protein RecN;protein_id=WP_023231958.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 238925 239803 . - . ID=gene-SO06_RS07340;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=SO06_RS07340 NZ_MYDG01000003.1 Protein Homology CDS 238925 239803 . - 0 ID=cds-WP_001059155.1;Parent=gene-SO06_RS07340;Dbxref=GenBank:WP_001059155.1;Name=WP_001059155.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=SO06_RS07340;product=NAD(+) kinase;protein_id=WP_001059155.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 239927 240517 . + . ID=gene-SO06_RS07350;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=SO06_RS07350 NZ_MYDG01000003.1 Protein Homology CDS 239927 240517 . + 0 ID=cds-WP_001518875.1;Parent=gene-SO06_RS07350;Dbxref=GenBank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=SO06_RS07350;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 240552 241157 . - . ID=gene-SO06_RS07355;Name=SO06_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07355 NZ_MYDG01000003.1 Protein Homology CDS 240552 241157 . - 0 ID=cds-WP_023202584.1;Parent=gene-SO06_RS07355;Dbxref=GenBank:WP_023202584.1;Name=WP_023202584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271805.1;locus_tag=SO06_RS07355;product=DUF6630 family protein;protein_id=WP_023202584.1;transl_table=11 NZ_MYDG01000003.1 RefSeq pseudogene 241290 241571 . - . ID=gene-SO06_RS07360;Name=SO06_RS07360;end_range=241571,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS07360;partial=true;pseudo=true;start_range=.,241290 NZ_MYDG01000003.1 Protein Homology CDS 241290 241571 . - 0 ID=cds-SO06_RS07360;Parent=gene-SO06_RS07360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=241571,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=SO06_RS07360;partial=true;product=transporter associated domain-containing protein;pseudo=true;start_range=.,241290;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 241652 242257 . - . ID=gene-SO06_RS07365;Name=SO06_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07365 NZ_MYDG01000003.1 Protein Homology CDS 241652 242257 . - 0 ID=cds-WP_001294017.1;Parent=gene-SO06_RS07365;Dbxref=GenBank:WP_001294017.1;Name=WP_001294017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=SO06_RS07365;product=DUF6630 family protein;protein_id=WP_001294017.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 242378 243664 . - . ID=gene-SO06_RS07370;Name=SO06_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07370 NZ_MYDG01000003.1 Protein Homology CDS 242378 243664 . - 0 ID=cds-WP_127172650.1;Parent=gene-SO06_RS07370;Dbxref=GenBank:WP_127172650.1;Name=WP_127172650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=SO06_RS07370;product=HlyC/CorC family transporter;protein_id=WP_127172650.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 243684 244475 . - . ID=gene-SO06_RS07375;Name=SO06_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07375 NZ_MYDG01000003.1 Protein Homology CDS 243684 244475 . - 0 ID=cds-WP_001537507.1;Parent=gene-SO06_RS07375;Dbxref=GenBank:WP_001537507.1;Name=WP_001537507.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=SO06_RS07375;product=cytochrome C assembly family protein;protein_id=WP_001537507.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 244641 246002 . + . ID=gene-SO06_RS07385;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=SO06_RS07385 NZ_MYDG01000003.1 Protein Homology CDS 244641 246002 . + 0 ID=cds-WP_000460052.1;Parent=gene-SO06_RS07385;Dbxref=GenBank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=SO06_RS07385;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 246316 246564 . + . ID=gene-SO06_RS07390;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=SO06_RS07390 NZ_MYDG01000003.1 Protein Homology CDS 246316 246564 . + 0 ID=cds-WP_000256453.1;Parent=gene-SO06_RS07390;Dbxref=GenBank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=SO06_RS07390;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 246583 247131 . + . ID=gene-SO06_RS07395;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=SO06_RS07395 NZ_MYDG01000003.1 Protein Homology CDS 246583 247131 . + 0 ID=cds-WP_000043266.1;Parent=gene-SO06_RS07395;Dbxref=GenBank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=SO06_RS07395;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 247176 247943 . + . ID=gene-SO06_RS07400;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=SO06_RS07400 NZ_MYDG01000003.1 Protein Homology CDS 247176 247943 . + 0 ID=cds-WP_000469813.1;Parent=gene-SO06_RS07400;Dbxref=GenBank:WP_000469813.1;Name=WP_000469813.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=SO06_RS07400;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469813.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 247984 248331 . + . ID=gene-SO06_RS07405;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=SO06_RS07405 NZ_MYDG01000003.1 Protein Homology CDS 247984 248331 . + 0 ID=cds-WP_000065257.1;Parent=gene-SO06_RS07405;Dbxref=GenBank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=SO06_RS07405;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 248488 249708 . - . ID=gene-SO06_RS07410;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=SO06_RS07410 NZ_MYDG01000003.1 Protein Homology CDS 248488 249708 . - 0 ID=cds-WP_023231960.1;Parent=gene-SO06_RS07410;Dbxref=GenBank:WP_023231960.1;Name=WP_023231960.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=SO06_RS07410;product=diguanylate cyclase DgcN;protein_id=WP_023231960.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 249701 250219 . - . ID=gene-SO06_RS07415;Name=SO06_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07415 NZ_MYDG01000003.1 Protein Homology CDS 249701 250219 . - 0 ID=cds-WP_001212380.1;Parent=gene-SO06_RS07415;Dbxref=GenBank:WP_001212380.1;Name=WP_001212380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=SO06_RS07415;product=YfiR family protein;protein_id=WP_001212380.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 250659 251729 . + . ID=gene-SO06_RS07420;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=SO06_RS07420 NZ_MYDG01000003.1 Protein Homology CDS 250659 251729 . + 0 ID=cds-WP_023231961.1;Parent=gene-SO06_RS07420;Dbxref=GenBank:WP_023231961.1;Name=WP_023231961.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=SO06_RS07420;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_023231961.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 251739 252860 . + . ID=gene-SO06_RS07425;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=SO06_RS07425 NZ_MYDG01000003.1 Protein Homology CDS 251739 252860 . + 0 ID=cds-WP_023231962.1;Parent=gene-SO06_RS07425;Dbxref=GenBank:WP_023231962.1;Name=WP_023231962.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=SO06_RS07425;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_023231962.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 252918 253826 . + . ID=gene-SO06_RS07430;Name=SO06_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07430 NZ_MYDG01000003.1 Protein Homology CDS 252918 253826 . + 0 ID=cds-WP_000210991.1;Parent=gene-SO06_RS07430;Dbxref=GenBank:WP_000210991.1;Name=WP_000210991.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=SO06_RS07430;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_000210991.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 253787 254947 . - . ID=gene-SO06_RS07435;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=SO06_RS07435 NZ_MYDG01000003.1 Protein Homology CDS 253787 254947 . - 0 ID=cds-WP_023184658.1;Parent=gene-SO06_RS07435;Dbxref=GenBank:WP_023184658.1;Name=WP_023184658.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=SO06_RS07435;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_023184658.1;transl_table=11 NZ_MYDG01000003.1 cmsearch sequence_feature 254970 255095 . - . ID=id-NZ_MYDG01000003.1:254970..255095;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_MYDG01000003.1 RefSeq gene 255047 255094 . - . ID=gene-SO06_RS24960;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=SO06_RS24960 NZ_MYDG01000003.1 Protein Homology CDS 255047 255094 . - 0 ID=cds-WP_010989056.1;Parent=gene-SO06_RS24960;Dbxref=GenBank:WP_010989056.1;Name=WP_010989056.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=SO06_RS24960;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 255198 255536 . - . ID=gene-SO06_RS07440;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=SO06_RS07440 NZ_MYDG01000003.1 Protein Homology CDS 255198 255536 . - 0 ID=cds-WP_000178449.1;Parent=gene-SO06_RS07440;Dbxref=GenBank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=SO06_RS07440;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 255808 256545 . - . ID=gene-SO06_RS07445;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=SO06_RS07445 NZ_MYDG01000003.1 Protein Homology CDS 255808 256545 . - 0 ID=cds-WP_000197660.1;Parent=gene-SO06_RS07445;Dbxref=GenBank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=SO06_RS07445;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 256677 257657 . + . ID=gene-SO06_RS07450;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=SO06_RS07450 NZ_MYDG01000003.1 Protein Homology CDS 256677 257657 . + 0 ID=cds-WP_000079130.1;Parent=gene-SO06_RS07450;Dbxref=GenBank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=SO06_RS07450;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 257654 258385 . + . ID=gene-SO06_RS07455;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=SO06_RS07455 NZ_MYDG01000003.1 Protein Homology CDS 257654 258385 . + 0 ID=cds-WP_000992639.1;Parent=gene-SO06_RS07455;Dbxref=GenBank:WP_000992639.1;Name=WP_000992639.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=SO06_RS07455;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000992639.1;transl_table=11 NZ_MYDG01000003.1 RefSeq gene 258515 261088 . + . ID=gene-SO06_RS07460;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=SO06_RS07460 NZ_MYDG01000003.1 Protein Homology CDS 258515 261088 . + 0 ID=cds-WP_001235092.1;Parent=gene-SO06_RS07460;Dbxref=GenBank:WP_001235092.1;Name=WP_001235092.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=SO06_RS07460;product=ATP-dependent chaperone ClpB;protein_id=WP_001235092.1;transl_table=11 ##sequence-region NZ_MYDG01000040.1 1 10913 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000040.1 RefSeq region 1 10913 . + . ID=NZ_MYDG01000040.1:1..10913;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000040.1 RefSeq gene 289 1956 . - . ID=gene-SO06_RS24400;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=SO06_RS24400 NZ_MYDG01000040.1 Protein Homology CDS 289 1956 . - 0 ID=cds-WP_001287181.1;Parent=gene-SO06_RS24400;Dbxref=GenBank:WP_001287181.1;Name=WP_001287181.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=SO06_RS24400;product=glutamine--tRNA ligase;protein_id=WP_001287181.1;transl_table=11 NZ_MYDG01000040.1 RefSeq gene 2167 4119 . - . ID=gene-SO06_RS24405;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=SO06_RS24405 NZ_MYDG01000040.1 Protein Homology CDS 2167 4119 . - 0 ID=cds-WP_023202197.1;Parent=gene-SO06_RS24405;Dbxref=GenBank:WP_023202197.1;Name=WP_023202197.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=SO06_RS24405;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_023202197.1;transl_table=11 NZ_MYDG01000040.1 RefSeq gene 4446 5246 . + . ID=gene-SO06_RS24410;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=SO06_RS24410 NZ_MYDG01000040.1 Protein Homology CDS 4446 5246 . + 0 ID=cds-WP_001237059.1;Parent=gene-SO06_RS24410;Dbxref=GenBank:WP_001237059.1;Name=WP_001237059.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=SO06_RS24410;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237059.1;transl_table=11 NZ_MYDG01000040.1 RefSeq gene 5306 6460 . + . ID=gene-SO06_RS24415;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=SO06_RS24415 NZ_MYDG01000040.1 Protein Homology CDS 5306 6460 . + 0 ID=cds-WP_000271186.1;Parent=gene-SO06_RS24415;Dbxref=GenBank:WP_000271186.1;Name=WP_000271186.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=SO06_RS24415;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271186.1;transl_table=11 NZ_MYDG01000040.1 RefSeq gene 6465 7685 . + . ID=gene-SO06_RS24420;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=SO06_RS24420 NZ_MYDG01000040.1 Protein Homology CDS 6465 7685 . + 0 ID=cds-WP_000187578.1;Parent=gene-SO06_RS24420;Dbxref=GenBank:WP_000187578.1;Name=WP_000187578.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=SO06_RS24420;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187578.1;transl_table=11 NZ_MYDG01000040.1 RefSeq gene 7732 8484 . + . ID=gene-SO06_RS24425;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=SO06_RS24425 NZ_MYDG01000040.1 Protein Homology CDS 7732 8484 . + 0 ID=cds-WP_000153143.1;Parent=gene-SO06_RS24425;Dbxref=GenBank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=SO06_RS24425;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11 NZ_MYDG01000040.1 RefSeq gene 8774 10438 . + . ID=gene-SO06_RS24435;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=SO06_RS24435 NZ_MYDG01000040.1 Protein Homology CDS 8774 10438 . + 0 ID=cds-WP_000337039.1;Parent=gene-SO06_RS24435;Dbxref=GenBank:WP_000337039.1;Name=WP_000337039.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=SO06_RS24435;product=asparagine synthase B;protein_id=WP_000337039.1;transl_table=11 NZ_MYDG01000040.1 RefSeq gene 10660 10736 . + . ID=gene-SO06_RS24440;Name=SO06_RS24440;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24440 NZ_MYDG01000040.1 tRNAscan-SE tRNA 10660 10736 . + . ID=rna-SO06_RS24440;Parent=gene-SO06_RS24440;anticodon=(pos:10694..10696);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24440;product=tRNA-Met NZ_MYDG01000040.1 tRNAscan-SE exon 10660 10736 . + . ID=exon-SO06_RS24440-1;Parent=rna-SO06_RS24440;anticodon=(pos:10694..10696);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24440;product=tRNA-Met NZ_MYDG01000040.1 RefSeq gene 10745 10829 . + . ID=gene-SO06_RS24445;Name=SO06_RS24445;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24445 NZ_MYDG01000040.1 tRNAscan-SE tRNA 10745 10829 . + . ID=rna-SO06_RS24445;Parent=gene-SO06_RS24445;anticodon=(pos:10779..10781);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24445;product=tRNA-Leu NZ_MYDG01000040.1 tRNAscan-SE exon 10745 10829 . + . ID=exon-SO06_RS24445-1;Parent=rna-SO06_RS24445;anticodon=(pos:10779..10781);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24445;product=tRNA-Leu ##sequence-region NZ_MYDG01000041.1 1 10640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000041.1 RefSeq region 1 10640 . + . ID=NZ_MYDG01000041.1:1..10640;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000041.1 RefSeq pseudogene 1 115 . - . ID=gene-SO06_RS24450;Name=SO06_RS24450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS24450;partial=true;pseudo=true;start_range=.,1 NZ_MYDG01000041.1 Protein Homology CDS 1 115 . - 0 ID=cds-SO06_RS24450;Parent=gene-SO06_RS24450;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=SO06_RS24450;partial=true;product=oxaloacetate decarboxylase;pseudo=true;start_range=.,1;transl_table=11 NZ_MYDG01000041.1 RefSeq gene 131 379 . - . ID=gene-SO06_RS24455;Name=SO06_RS24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24455 NZ_MYDG01000041.1 Protein Homology CDS 131 379 . - 0 ID=cds-WP_023232566.1;Parent=gene-SO06_RS24455;Dbxref=GenBank:WP_023232566.1;Name=WP_023232566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=SO06_RS24455;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_023232566.1;transl_table=11 NZ_MYDG01000041.1 RefSeq gene 429 1697 . - . ID=gene-SO06_RS24460;Name=SO06_RS24460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24460 NZ_MYDG01000041.1 Protein Homology CDS 429 1697 . - 0 ID=cds-WP_023232565.1;Parent=gene-SO06_RS24460;Dbxref=GenBank:WP_023232565.1;Name=WP_023232565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=SO06_RS24460;product=SLC13 family permease;protein_id=WP_023232565.1;transl_table=11 NZ_MYDG01000041.1 RefSeq gene 1920 2903 . + . ID=gene-SO06_RS24465;Name=SO06_RS24465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24465 NZ_MYDG01000041.1 Protein Homology CDS 1920 2903 . + 0 ID=cds-WP_000282119.1;Parent=gene-SO06_RS24465;Dbxref=GenBank:WP_000282119.1;Name=WP_000282119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=SO06_RS24465;product=LysR family transcriptional regulator;protein_id=WP_000282119.1;transl_table=11 NZ_MYDG01000041.1 RefSeq gene 2904 3794 . - . ID=gene-SO06_RS24470;Name=SO06_RS24470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24470 NZ_MYDG01000041.1 Protein Homology CDS 2904 3794 . - 0 ID=cds-WP_000405924.1;Parent=gene-SO06_RS24470;Dbxref=GenBank:WP_000405924.1;Name=WP_000405924.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=SO06_RS24470;product=LysR family transcriptional regulator;protein_id=WP_000405924.1;transl_table=11 NZ_MYDG01000041.1 RefSeq gene 3924 4769 . + . ID=gene-SO06_RS24475;Name=SO06_RS24475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24475 NZ_MYDG01000041.1 Protein Homology CDS 3924 4769 . + 0 ID=cds-WP_000086831.1;Parent=gene-SO06_RS24475;Dbxref=GenBank:WP_000086831.1;Name=WP_000086831.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=SO06_RS24475;product=fumarate hydratase;protein_id=WP_000086831.1;transl_table=11 NZ_MYDG01000041.1 RefSeq gene 4784 5329 . + . ID=gene-SO06_RS24480;Name=SO06_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24480 NZ_MYDG01000041.1 Protein Homology CDS 4784 5329 . + 0 ID=cds-WP_000970374.1;Parent=gene-SO06_RS24480;Dbxref=GenBank:WP_000970374.1;Name=WP_000970374.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=SO06_RS24480;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WP_000970374.1;transl_table=11 NZ_MYDG01000041.1 RefSeq gene 5423 6475 . - . ID=gene-SO06_RS24485;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=SO06_RS24485 NZ_MYDG01000041.1 Protein Homology CDS 5423 6475 . - 0 ID=cds-WP_001109234.1;Parent=gene-SO06_RS24485;Dbxref=GenBank:WP_001109234.1;Name=WP_001109234.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=SO06_RS24485;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109234.1;transl_table=11 NZ_MYDG01000041.1 RefSeq gene 6795 7181 . + . ID=gene-SO06_RS24490;Name=SO06_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24490 NZ_MYDG01000041.1 Protein Homology CDS 6795 7181 . + 0 ID=cds-WP_000784380.1;Parent=gene-SO06_RS24490;Dbxref=GenBank:WP_000784380.1;Name=WP_000784380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=SO06_RS24490;product=YbgS-like family protein;protein_id=WP_000784380.1;transl_table=11 NZ_MYDG01000041.1 RefSeq gene 7292 8230 . + . ID=gene-SO06_RS24495;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=SO06_RS24495 NZ_MYDG01000041.1 Protein Homology CDS 7292 8230 . + 0 ID=cds-WP_000951250.1;Parent=gene-SO06_RS24495;Dbxref=GenBank:WP_000951250.1;Name=WP_000951250.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=SO06_RS24495;product=CDF family zinc transporter ZitB;protein_id=WP_000951250.1;transl_table=11 NZ_MYDG01000041.1 RefSeq gene 8227 8946 . - . ID=gene-SO06_RS24500;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=SO06_RS24500 NZ_MYDG01000041.1 Protein Homology CDS 8227 8946 . - 0 ID=cds-WP_001728872.1;Parent=gene-SO06_RS24500;Dbxref=GenBank:WP_001728872.1;Name=WP_001728872.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=SO06_RS24500;product=nicotinamide riboside transporter PnuC;protein_id=WP_001728872.1;transl_table=11 NZ_MYDG01000041.1 RefSeq gene 8972 10015 . - . ID=gene-SO06_RS24505;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=SO06_RS24505 NZ_MYDG01000041.1 Protein Homology CDS 8972 10015 . - 0 ID=cds-WP_023232564.1;Parent=gene-SO06_RS24505;Dbxref=GenBank:WP_023232564.1;Name=WP_023232564.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=SO06_RS24505;product=quinolinate synthase NadA;protein_id=WP_023232564.1;transl_table=11 NZ_MYDG01000041.1 RefSeq gene 10310 10435 . - . ID=gene-SO06_RS24510;Name=SO06_RS24510;gbkey=Gene;gene_biotype=ncRNA;locus_tag=SO06_RS24510 NZ_MYDG01000041.1 cmsearch ncRNA 10310 10435 . - . ID=rna-SO06_RS24510;Parent=gene-SO06_RS24510;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24510;product=RtT sRNA NZ_MYDG01000041.1 cmsearch exon 10310 10435 . - . ID=exon-SO06_RS24510-1;Parent=rna-SO06_RS24510;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24510;product=RtT sRNA NZ_MYDG01000041.1 RefSeq gene 10564 10639 . - . ID=gene-SO06_RS24515;Name=SO06_RS24515;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24515 NZ_MYDG01000041.1 tRNAscan-SE tRNA 10564 10639 . - . ID=rna-SO06_RS24515;Parent=gene-SO06_RS24515;anticodon=(pos:complement(10604..10606));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24515;product=tRNA-Lys NZ_MYDG01000041.1 tRNAscan-SE exon 10564 10639 . - . ID=exon-SO06_RS24515-1;Parent=rna-SO06_RS24515;anticodon=(pos:complement(10604..10606));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24515;product=tRNA-Lys ##sequence-region NZ_MYDG01000042.1 1 6311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000042.1 RefSeq region 1 6311 . + . ID=NZ_MYDG01000042.1:1..6311;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000042.1 RefSeq gene 42 1085 . - . ID=gene-SO06_RS24520;Name=SO06_RS24520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24520 NZ_MYDG01000042.1 Protein Homology CDS 42 1085 . - 0 ID=cds-WP_080204293.1;Parent=gene-SO06_RS24520;Dbxref=GenBank:WP_080204293.1;Name=WP_080204293.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=SO06_RS24520;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_080204293.1;transl_table=11 NZ_MYDG01000042.1 RefSeq gene 1082 1639 . - . ID=gene-SO06_RS24525;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=SO06_RS24525 NZ_MYDG01000042.1 Protein Homology CDS 1082 1639 . - 0 ID=cds-WP_000828304.1;Parent=gene-SO06_RS24525;Dbxref=GenBank:WP_000828304.1;Name=WP_000828304.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=SO06_RS24525;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000828304.1;transl_table=11 NZ_MYDG01000042.1 RefSeq gene 1636 3567 . - . ID=gene-SO06_RS24530;Name=SO06_RS24530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24530 NZ_MYDG01000042.1 Protein Homology CDS 1636 3567 . - 0 ID=cds-WP_061378613.1;Parent=gene-SO06_RS24530;Dbxref=GenBank:WP_061378613.1;Name=WP_061378613.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=SO06_RS24530;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_061378613.1;transl_table=11 NZ_MYDG01000042.1 RefSeq gene 3564 4043 . - . ID=gene-SO06_RS24535;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=SO06_RS24535 NZ_MYDG01000042.1 Protein Homology CDS 3564 4043 . - 0 ID=cds-WP_001053600.1;Parent=gene-SO06_RS24535;Dbxref=GenBank:WP_001053600.1;Name=WP_001053600.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=SO06_RS24535;product=cytochrome c maturation protein CcmE;protein_id=WP_001053600.1;transl_table=11 NZ_MYDG01000042.1 RefSeq gene 4040 4252 . - . ID=gene-SO06_RS24540;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=SO06_RS24540 NZ_MYDG01000042.1 Protein Homology CDS 4040 4252 . - 0 ID=cds-WP_000074113.1;Parent=gene-SO06_RS24540;Dbxref=GenBank:WP_000074113.1;Name=WP_000074113.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=SO06_RS24540;product=heme exporter protein CcmD;protein_id=WP_000074113.1;transl_table=11 NZ_MYDG01000042.1 RefSeq gene 4249 4986 . - . ID=gene-SO06_RS24545;Name=SO06_RS24545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24545 NZ_MYDG01000042.1 Protein Homology CDS 4249 4986 . - 0 ID=cds-WP_017442047.1;Parent=gene-SO06_RS24545;Dbxref=GenBank:WP_017442047.1;Name=WP_017442047.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=SO06_RS24545;product=heme ABC transporter permease;protein_id=WP_017442047.1;transl_table=11 NZ_MYDG01000042.1 RefSeq gene 5038 5697 . - . ID=gene-SO06_RS24550;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=SO06_RS24550 NZ_MYDG01000042.1 Protein Homology CDS 5038 5697 . - 0 ID=cds-WP_000990033.1;Parent=gene-SO06_RS24550;Dbxref=GenBank:WP_000990033.1;Name=WP_000990033.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=SO06_RS24550;product=heme exporter protein CcmB;protein_id=WP_000990033.1;transl_table=11 NZ_MYDG01000042.1 RefSeq gene 5694 6311 . - . ID=gene-SO06_RS24555;Name=ccmA;end_range=6311,.;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=SO06_RS24555;partial=true NZ_MYDG01000042.1 Protein Homology CDS 5694 6311 . - 0 ID=cds-WP_023242830.1;Parent=gene-SO06_RS24555;Dbxref=GenBank:WP_023242830.1;Name=WP_023242830.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;end_range=6311,.;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=SO06_RS24555;partial=true;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_023242830.1;transl_table=11 ##sequence-region NZ_MYDG01000043.1 1 4660 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000043.1 RefSeq region 1 4660 . + . ID=NZ_MYDG01000043.1:1..4660;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000043.1 RefSeq pseudogene 1 196 . + . ID=gene-SO06_RS25405;Name=SO06_RS25405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25405;partial=true;pseudo=true;start_range=.,1 NZ_MYDG01000043.1 Protein Homology CDS 1 196 . + 1 ID=cds-SO06_RS25405;Parent=gene-SO06_RS25405;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001354646.1;locus_tag=SO06_RS25405;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_MYDG01000043.1 RefSeq gene 884 1117 . - . ID=gene-SO06_RS25220;Name=SO06_RS25220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25220 NZ_MYDG01000043.1 Protein Homology CDS 884 1117 . - 0 ID=cds-WP_000137388.1;Parent=gene-SO06_RS25220;Dbxref=GenBank:WP_000137388.1;Name=WP_000137388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016769.6;locus_tag=SO06_RS25220;product=MbeD family mobilization/exclusion protein;protein_id=WP_000137388.1;transl_table=11 NZ_MYDG01000043.1 RefSeq gene 1124 1684 . - . ID=gene-SO06_RS25225;Name=SO06_RS25225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25225 NZ_MYDG01000043.1 Protein Homology CDS 1124 1684 . - 0 ID=cds-WP_000067488.1;Parent=gene-SO06_RS25225;Dbxref=GenBank:WP_000067488.1;Name=WP_000067488.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016710.6;locus_tag=SO06_RS25225;product=MbeB family mobilization protein;protein_id=WP_000067488.1;transl_table=11 NZ_MYDG01000043.1 RefSeq pseudogene 2055 2372 . - . ID=gene-SO06_RS25860;Name=SO06_RS25860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25860;partial=true;pseudo=true;start_range=.,2055 NZ_MYDG01000043.1 Protein Homology CDS 2055 2372 . - 0 ID=cds-SO06_RS25860;Parent=gene-SO06_RS25860;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015397.6;locus_tag=SO06_RS25860;partial=true;product=plasmid mobilization relaxase MbeA;pseudo=true;start_range=.,2055;transl_table=11 NZ_MYDG01000043.1 RefSeq gene 2362 2685 . - . ID=gene-SO06_RS24575;Name=SO06_RS24575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24575 NZ_MYDG01000043.1 Protein Homology CDS 2362 2685 . - 0 ID=cds-WP_001677263.1;Parent=gene-SO06_RS24575;Dbxref=GenBank:WP_001677263.1;Name=WP_001677263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956000.1;locus_tag=SO06_RS24575;product=MobC family plasmid mobilization relaxosome protein;protein_id=WP_001677263.1;transl_table=11 NZ_MYDG01000043.1 RefSeq gene 2748 2939 . + . ID=gene-SO06_RS24580;Name=SO06_RS24580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24580 NZ_MYDG01000043.1 Protein Homology CDS 2748 2939 . + 0 ID=cds-WP_001677262.1;Parent=gene-SO06_RS24580;Dbxref=GenBank:WP_001677262.1;Name=WP_001677262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165979.1;locus_tag=SO06_RS24580;product=Rop family plasmid primer RNA-binding protein;protein_id=WP_001677262.1;transl_table=11 NZ_MYDG01000043.1 RefSeq gene 3609 3758 . + . ID=gene-SO06_RS25730;Name=SO06_RS25730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25730 NZ_MYDG01000043.1 Protein Homology CDS 3609 3758 . + 0 ID=cds-WP_032194431.1;Parent=gene-SO06_RS25730;Dbxref=GenBank:WP_032194431.1;Name=WP_032194431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001717510.1;locus_tag=SO06_RS25730;product=hypothetical protein;protein_id=WP_032194431.1;transl_table=11 NZ_MYDG01000043.1 RefSeq gene 3950 4660 . + . ID=gene-SO06_RS24590;Name=SO06_RS24590;end_range=4660,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24590;partial=true NZ_MYDG01000043.1 Protein Homology CDS 3950 4660 . + 0 ID=cds-WP_080204294.1;Parent=gene-SO06_RS24590;Dbxref=GenBank:WP_080204294.1;Name=WP_080204294.1;end_range=4660,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001354646.1;locus_tag=SO06_RS24590;partial=true;product=hypothetical protein;protein_id=WP_080204294.1;transl_table=11 ##sequence-region NZ_MYDG01000044.1 1 4420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000044.1 RefSeq region 1 4420 . + . ID=NZ_MYDG01000044.1:1..4420;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000044.1 RefSeq gene 1 106 . + . ID=gene-SO06_RS24595;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=SO06_RS24595;partial=true;start_range=.,1 NZ_MYDG01000044.1 cmsearch rRNA 1 106 . + . ID=rna-SO06_RS24595;Parent=gene-SO06_RS24595;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24595;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_MYDG01000044.1 cmsearch exon 1 106 . + . ID=exon-SO06_RS24595-1;Parent=rna-SO06_RS24595;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24595;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_MYDG01000044.1 RefSeq gene 288 1316 . + . ID=gene-SO06_RS24600;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=SO06_RS24600 NZ_MYDG01000044.1 Protein Homology CDS 288 1316 . + 0 ID=cds-WP_000149795.1;Parent=gene-SO06_RS24600;Dbxref=GenBank:WP_000149795.1;Name=WP_000149795.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=SO06_RS24600;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_000149795.1;transl_table=11 NZ_MYDG01000044.1 RefSeq gene 1313 2275 . + . ID=gene-SO06_RS24605;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=SO06_RS24605 NZ_MYDG01000044.1 Protein Homology CDS 1313 2275 . + 0 ID=cds-WP_000655746.1;Parent=gene-SO06_RS24605;Dbxref=GenBank:WP_000655746.1;Name=WP_000655746.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=SO06_RS24605;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655746.1;transl_table=11 NZ_MYDG01000044.1 RefSeq gene 2310 3260 . - . ID=gene-SO06_RS24610;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=SO06_RS24610 NZ_MYDG01000044.1 Protein Homology CDS 2310 3260 . - 0 ID=cds-WP_000023068.1;Parent=gene-SO06_RS24610;Dbxref=GenBank:WP_000023068.1;Name=WP_000023068.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=SO06_RS24610;product=type I pantothenate kinase;protein_id=WP_000023068.1;transl_table=11 NZ_MYDG01000044.1 RefSeq gene 3469 3642 . - . ID=gene-SO06_RS24620;Name=SO06_RS24620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24620 NZ_MYDG01000044.1 Protein Homology CDS 3469 3642 . - 0 ID=cds-WP_001621476.1;Parent=gene-SO06_RS24620;Dbxref=GenBank:WP_001621476.1;Name=WP_001621476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=SO06_RS24620;product=hypothetical protein;protein_id=WP_001621476.1;transl_table=11 NZ_MYDG01000044.1 RefSeq gene 3662 3737 . + . ID=gene-SO06_RS24625;Name=SO06_RS24625;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24625 NZ_MYDG01000044.1 tRNAscan-SE tRNA 3662 3737 . + . ID=rna-SO06_RS24625;Parent=gene-SO06_RS24625;anticodon=(pos:3695..3697);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24625;product=tRNA-Thr NZ_MYDG01000044.1 tRNAscan-SE exon 3662 3737 . + . ID=exon-SO06_RS24625-1;Parent=rna-SO06_RS24625;anticodon=(pos:3695..3697);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24625;product=tRNA-Thr NZ_MYDG01000044.1 RefSeq gene 3746 3830 . + . ID=gene-SO06_RS24630;Name=SO06_RS24630;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24630 NZ_MYDG01000044.1 tRNAscan-SE tRNA 3746 3830 . + . ID=rna-SO06_RS24630;Parent=gene-SO06_RS24630;anticodon=(pos:3780..3782);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24630;product=tRNA-Tyr NZ_MYDG01000044.1 tRNAscan-SE exon 3746 3830 . + . ID=exon-SO06_RS24630-1;Parent=rna-SO06_RS24630;anticodon=(pos:3780..3782);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24630;product=tRNA-Tyr NZ_MYDG01000044.1 RefSeq gene 3947 4021 . + . ID=gene-SO06_RS24635;Name=SO06_RS24635;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24635 NZ_MYDG01000044.1 tRNAscan-SE tRNA 3947 4021 . + . ID=rna-SO06_RS24635;Parent=gene-SO06_RS24635;anticodon=(pos:3980..3982);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24635;product=tRNA-Gly NZ_MYDG01000044.1 tRNAscan-SE exon 3947 4021 . + . ID=exon-SO06_RS24635-1;Parent=rna-SO06_RS24635;anticodon=(pos:3980..3982);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24635;product=tRNA-Gly NZ_MYDG01000044.1 RefSeq gene 4028 4103 . + . ID=gene-SO06_RS24640;Name=SO06_RS24640;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24640 NZ_MYDG01000044.1 tRNAscan-SE tRNA 4028 4103 . + . ID=rna-SO06_RS24640;Parent=gene-SO06_RS24640;anticodon=(pos:4061..4063);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24640;product=tRNA-Thr NZ_MYDG01000044.1 tRNAscan-SE exon 4028 4103 . + . ID=exon-SO06_RS24640-1;Parent=rna-SO06_RS24640;anticodon=(pos:4061..4063);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24640;product=tRNA-Thr NZ_MYDG01000044.1 RefSeq gene 4219 4420 . + . ID=gene-SO06_RS24645;Name=SO06_RS24645;end_range=4420,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24645;partial=true NZ_MYDG01000044.1 Protein Homology CDS 4219 4420 . + 0 ID=cds-WP_000031658.1-2;Parent=gene-SO06_RS24645;Dbxref=GenBank:WP_000031658.1;Name=WP_000031658.1;Ontology_term=GO:0003924,GO:0005525;end_range=4420,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=SO06_RS24645;partial=true;product=GTP-binding protein;protein_id=WP_000031658.1;transl_table=11 ##sequence-region NZ_MYDG01000045.1 1 3808 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000045.1 RefSeq region 1 3808 . + . ID=NZ_MYDG01000045.1:1..3808;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000045.1 RefSeq gene 3 78 . - . ID=gene-SO06_RS24650;Name=SO06_RS24650;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24650 NZ_MYDG01000045.1 tRNAscan-SE tRNA 3 78 . - . ID=rna-SO06_RS24650;Parent=gene-SO06_RS24650;anticodon=(pos:complement(43..45));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24650;product=tRNA-Lys NZ_MYDG01000045.1 tRNAscan-SE exon 3 78 . - . ID=exon-SO06_RS24650-1;Parent=rna-SO06_RS24650;anticodon=(pos:complement(43..45));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24650;product=tRNA-Lys NZ_MYDG01000045.1 RefSeq gene 82 157 . - . ID=gene-SO06_RS24655;Name=SO06_RS24655;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24655 NZ_MYDG01000045.1 tRNAscan-SE tRNA 82 157 . - . ID=rna-SO06_RS24655;Parent=gene-SO06_RS24655;anticodon=(pos:complement(122..124));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24655;product=tRNA-Val NZ_MYDG01000045.1 tRNAscan-SE exon 82 157 . - . ID=exon-SO06_RS24655-1;Parent=rna-SO06_RS24655;anticodon=(pos:complement(122..124));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24655;product=tRNA-Val NZ_MYDG01000045.1 RefSeq gene 294 369 . - . ID=gene-SO06_RS24660;Name=SO06_RS24660;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24660 NZ_MYDG01000045.1 tRNAscan-SE tRNA 294 369 . - . ID=rna-SO06_RS24660;Parent=gene-SO06_RS24660;anticodon=(pos:complement(334..336));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24660;product=tRNA-Lys NZ_MYDG01000045.1 tRNAscan-SE exon 294 369 . - . ID=exon-SO06_RS24660-1;Parent=rna-SO06_RS24660;anticodon=(pos:complement(334..336));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24660;product=tRNA-Lys NZ_MYDG01000045.1 RefSeq gene 534 1322 . - . ID=gene-SO06_RS24665;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=SO06_RS24665 NZ_MYDG01000045.1 Protein Homology CDS 534 1322 . - 0 ID=cds-WP_000097553.1;Parent=gene-SO06_RS24665;Dbxref=GenBank:WP_000097553.1;Name=WP_000097553.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=SO06_RS24665;product=cell division protein CpoB;protein_id=WP_000097553.1;transl_table=11 NZ_MYDG01000045.1 RefSeq gene 1332 1856 . - . ID=gene-SO06_RS24670;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=SO06_RS24670 NZ_MYDG01000045.1 Protein Homology CDS 1332 1856 . - 0 ID=cds-WP_001176621.1;Parent=gene-SO06_RS24670;Dbxref=GenBank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=SO06_RS24670;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11 NZ_MYDG01000045.1 RefSeq gene 1891 3183 . - . ID=gene-SO06_RS24675;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=SO06_RS24675 NZ_MYDG01000045.1 Protein Homology CDS 1891 3183 . - 0 ID=cds-WP_001562341.1;Parent=gene-SO06_RS24675;Dbxref=GenBank:WP_001562341.1;Name=WP_001562341.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=SO06_RS24675;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001562341.1;transl_table=11 NZ_MYDG01000045.1 RefSeq gene 3307 3808 . - . ID=gene-SO06_RS24680;Name=tolA;end_range=3808,.;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=SO06_RS24680;partial=true NZ_MYDG01000045.1 Protein Homology CDS 3307 3808 . - 1 ID=cds-WP_139783748.1;Parent=gene-SO06_RS24680;Dbxref=GenBank:WP_139783748.1;Name=WP_139783748.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;end_range=3808,.;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=SO06_RS24680;partial=true;product=cell envelope integrity protein TolA;protein_id=WP_139783748.1;transl_table=11 ##sequence-region NZ_MYDG01000046.1 1 3268 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000046.1 RefSeq region 1 3268 . + . ID=NZ_MYDG01000046.1:1..3268;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000046.1 RefSeq gene 1 59 . - . ID=gene-SO06_RS24685;Name=SO06_RS24685;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24685 NZ_MYDG01000046.1 tRNAscan-SE tRNA 1 59 . - . ID=rna-SO06_RS24685;Parent=gene-SO06_RS24685;anticodon=(pos:complement(31..33));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24685;product=tRNA-Met NZ_MYDG01000046.1 tRNAscan-SE exon 1 59 . - . ID=exon-SO06_RS24685-1;Parent=rna-SO06_RS24685;anticodon=(pos:complement(31..33));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24685;product=tRNA-Met NZ_MYDG01000046.1 RefSeq gene 411 1754 . + . ID=gene-SO06_RS24690;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=SO06_RS24690 NZ_MYDG01000046.1 Protein Homology CDS 411 1754 . + 0 ID=cds-WP_000207646.1;Parent=gene-SO06_RS24690;Dbxref=GenBank:WP_000207646.1;Name=WP_000207646.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=SO06_RS24690;product=argininosuccinate synthase;protein_id=WP_000207646.1;transl_table=11 NZ_MYDG01000046.1 RefSeq gene 1841 2905 . - . ID=gene-SO06_RS24695;Name=SO06_RS24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24695 NZ_MYDG01000046.1 Protein Homology CDS 1841 2905 . - 0 ID=cds-WP_000051504.1;Parent=gene-SO06_RS24695;Dbxref=GenBank:WP_000051504.1;Name=WP_000051504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462203.1;locus_tag=SO06_RS24695;product=DUF1963 domain-containing protein;protein_id=WP_000051504.1;transl_table=11 ##sequence-region NZ_MYDG01000047.1 1 1663 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000047.1 RefSeq region 1 1663 . + . ID=NZ_MYDG01000047.1:1..1663;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000047.1 RefSeq gene 79 1619 . + . ID=gene-SO06_RS24700;Name=SO06_RS24700;gbkey=Gene;gene_biotype=rRNA;locus_tag=SO06_RS24700 NZ_MYDG01000047.1 cmsearch rRNA 79 1619 . + . ID=rna-SO06_RS24700;Parent=gene-SO06_RS24700;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24700;product=16S ribosomal RNA NZ_MYDG01000047.1 cmsearch exon 79 1619 . + . ID=exon-SO06_RS24700-1;Parent=rna-SO06_RS24700;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24700;product=16S ribosomal RNA ##sequence-region NZ_MYDG01000048.1 1 1569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000048.1 RefSeq region 1 1569 . + . ID=NZ_MYDG01000048.1:1..1569;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000048.1 RefSeq gene 1 1569 . - . ID=gene-SO06_RS24705;Name=SO06_RS24705;end_range=1569,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=SO06_RS24705;partial=true;start_range=.,1 NZ_MYDG01000048.1 cmsearch rRNA 1 1569 . - . ID=rna-SO06_RS24705;Parent=gene-SO06_RS24705;Dbxref=RFAM:RF02541;end_range=1569,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24705;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_MYDG01000048.1 cmsearch exon 1 1569 . - . ID=exon-SO06_RS24705-1;Parent=rna-SO06_RS24705;Dbxref=RFAM:RF02541;end_range=1569,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24705;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_MYDG01000049.1 1 1496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000049.1 RefSeq region 1 1496 . + . ID=NZ_MYDG01000049.1:1..1496;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000049.1 RefSeq gene 1 1496 . - . ID=gene-SO06_RS24710;Name=oadA;end_range=1496,.;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=SO06_RS24710;partial=true;start_range=.,1 NZ_MYDG01000049.1 Protein Homology CDS 1 1496 . - 1 ID=cds-WP_139783749.1;Parent=gene-SO06_RS24710;Dbxref=GenBank:WP_139783749.1;Name=WP_139783749.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;end_range=1496,.;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=SO06_RS24710;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_139783749.1;start_range=.,1;transl_table=11 ##sequence-region NZ_MYDG01000004.1 1 253537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000004.1 RefSeq region 1 253537 . + . ID=NZ_MYDG01000004.1:1..253537;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000004.1 RefSeq gene 238 540 . + . ID=gene-SO06_RS07480;Name=SO06_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07480 NZ_MYDG01000004.1 Protein Homology CDS 238 540 . + 0 ID=cds-WP_023231730.1;Parent=gene-SO06_RS07480;Dbxref=GenBank:WP_023231730.1;Name=WP_023231730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835997.1;locus_tag=SO06_RS07480;product=Arm DNA-binding domain-containing protein;protein_id=WP_023231730.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 559 1608 . - . ID=gene-SO06_RS07485;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=SO06_RS07485 NZ_MYDG01000004.1 Protein Homology CDS 559 1608 . - 0 ID=cds-WP_001276040.1;Parent=gene-SO06_RS07485;Dbxref=GenBank:WP_001276040.1;Name=WP_001276040.1;Ontology_term=GO:0015700,GO:0046685,GO:0008490,GO:0015103,GO:0015297,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite secondary active transmembrane transporter activity|0008490||IEA,inorganic anion transmembrane transporter activity|0015103||IEA,antiporter activity|0015297||IEA;go_process=arsenite transport|0015700||IEA,response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276037.1;locus_tag=SO06_RS07485;product=ACR3 family arsenite efflux transporter;protein_id=WP_001276040.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 1626 3386 . - . ID=gene-SO06_RS07490;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=SO06_RS07490 NZ_MYDG01000004.1 Protein Homology CDS 1626 3386 . - 0 ID=cds-WP_023231729.1;Parent=gene-SO06_RS07490;Dbxref=GenBank:WP_023231729.1;Name=WP_023231729.1;Ontology_term=GO:0071722,GO:0005524,GO:0015446,GO:0016887;gbkey=CDS;gene=arsA;go_function=ATP binding|0005524||IEA,ATPase-coupled arsenite transmembrane transporter activity|0015446||IEA,ATP hydrolysis activity|0016887||IEA;go_process=detoxification of arsenic-containing substance|0071722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497796.1;locus_tag=SO06_RS07490;product=arsenical pump-driving ATPase;protein_id=WP_023231729.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 3430 3792 . - . ID=gene-SO06_RS07495;Name=arsD;gbkey=Gene;gene=arsD;gene_biotype=protein_coding;locus_tag=SO06_RS07495 NZ_MYDG01000004.1 Protein Homology CDS 3430 3792 . - 0 ID=cds-WP_000849418.1;Parent=gene-SO06_RS07495;Dbxref=GenBank:WP_000849418.1;Name=WP_000849418.1;Ontology_term=GO:0046685,GO:0003677;gbkey=CDS;gene=arsD;go_function=DNA binding|0003677||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000849419.1;locus_tag=SO06_RS07495;product=arsenite efflux transporter metallochaperone ArsD;protein_id=WP_000849418.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 3826 4302 . - . ID=gene-SO06_RS07500;Name=SO06_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07500 NZ_MYDG01000004.1 Protein Homology CDS 3826 4302 . - 0 ID=cds-WP_001101540.1;Parent=gene-SO06_RS07500;Dbxref=GenBank:WP_001101540.1;Name=WP_001101540.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101538.1;locus_tag=SO06_RS07500;product=arsenate reductase ArsC;protein_id=WP_001101540.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 4299 4673 . - . ID=gene-SO06_RS07505;Name=SO06_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07505 NZ_MYDG01000004.1 Protein Homology CDS 4299 4673 . - 0 ID=cds-WP_001041817.1;Parent=gene-SO06_RS07505;Dbxref=GenBank:WP_001041817.1;Name=WP_001041817.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041816.1;locus_tag=SO06_RS07505;product=ArsR/SmtB family transcription factor;protein_id=WP_001041817.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 5087 5272 . + . ID=gene-SO06_RS25685;Name=SO06_RS25685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25685 NZ_MYDG01000004.1 Protein Homology CDS 5087 5272 . + 0 ID=cds-WP_023231728.1;Parent=gene-SO06_RS25685;Dbxref=GenBank:WP_023231728.1;Name=WP_023231728.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024750.6;locus_tag=SO06_RS25685;product=Arm DNA-binding domain-containing protein;protein_id=WP_023231728.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 5420 6349 . - . ID=gene-SO06_RS07515;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=SO06_RS07515 NZ_MYDG01000004.1 Protein Homology CDS 5420 6349 . - 0 ID=cds-WP_023195176.1;Parent=gene-SO06_RS07515;Dbxref=GenBank:WP_023195176.1;Name=WP_023195176.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=SO06_RS07515;product=L%2CD-transpeptidase;protein_id=WP_023195176.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 6427 7497 . - . ID=gene-SO06_RS07520;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=SO06_RS07520 NZ_MYDG01000004.1 Protein Homology CDS 6427 7497 . - 0 ID=cds-WP_001193976.1;Parent=gene-SO06_RS07520;Dbxref=GenBank:WP_001193976.1;Name=WP_001193976.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=SO06_RS07520;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193976.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 7524 8267 . - . ID=gene-SO06_RS07525;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=SO06_RS07525 NZ_MYDG01000004.1 Protein Homology CDS 7524 8267 . - 0 ID=cds-WP_000040003.1;Parent=gene-SO06_RS07525;Dbxref=GenBank:WP_000040003.1;Name=WP_000040003.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=SO06_RS07525;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_000040003.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 8264 8809 . - . ID=gene-SO06_RS07530;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=SO06_RS07530 NZ_MYDG01000004.1 Protein Homology CDS 8264 8809 . - 0 ID=cds-WP_000973145.1;Parent=gene-SO06_RS07530;Dbxref=GenBank:WP_000973145.1;Name=WP_000973145.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=SO06_RS07530;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973145.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 8806 10326 . - . ID=gene-SO06_RS07535;Name=SO06_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07535 NZ_MYDG01000004.1 Protein Homology CDS 8806 10326 . - 0 ID=cds-WP_001528462.1;Parent=gene-SO06_RS07535;Dbxref=GenBank:WP_001528462.1;Name=WP_001528462.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=SO06_RS07535;product=cobyric acid synthase;protein_id=WP_001528462.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 10323 11138 . - . ID=gene-SO06_RS07540;Name=SO06_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07540 NZ_MYDG01000004.1 Protein Homology CDS 10323 11138 . - 0 ID=cds-WP_048348870.1;Parent=gene-SO06_RS07540;Dbxref=GenBank:WP_048348870.1;Name=WP_048348870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=SO06_RS07540;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_048348870.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 11147 11824 . - . ID=gene-SO06_RS07545;Name=SO06_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07545 NZ_MYDG01000004.1 Protein Homology CDS 11147 11824 . - 0 ID=cds-WP_000147137.1;Parent=gene-SO06_RS07545;Dbxref=GenBank:WP_000147137.1;Name=WP_000147137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=SO06_RS07545;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_000147137.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 11811 12092 . - . ID=gene-SO06_RS07550;Name=SO06_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07550 NZ_MYDG01000004.1 Protein Homology CDS 11811 12092 . - 0 ID=cds-WP_000753212.1;Parent=gene-SO06_RS07550;Dbxref=GenBank:WP_000753212.1;Name=WP_000753212.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=SO06_RS07550;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753212.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 12094 12831 . - . ID=gene-SO06_RS07555;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=SO06_RS07555 NZ_MYDG01000004.1 Protein Homology CDS 12094 12831 . - 0 ID=cds-WP_000764336.1;Parent=gene-SO06_RS07555;Dbxref=GenBank:WP_000764336.1;Name=WP_000764336.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=SO06_RS07555;product=cobalt ECF transporter S component CbiM;protein_id=WP_000764336.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 12828 13541 . - . ID=gene-SO06_RS07560;Name=SO06_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07560 NZ_MYDG01000004.1 Protein Homology CDS 12828 13541 . - 0 ID=cds-WP_001013552.1;Parent=gene-SO06_RS07560;Dbxref=GenBank:WP_001013552.1;Name=WP_001013552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=SO06_RS07560;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_001013552.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 13538 14332 . - . ID=gene-SO06_RS07565;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=SO06_RS07565 NZ_MYDG01000004.1 Protein Homology CDS 13538 14332 . - 0 ID=cds-WP_023231725.1;Parent=gene-SO06_RS07565;Dbxref=GenBank:WP_023231725.1;Name=WP_023231725.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=SO06_RS07565;product=sirohydrochlorin cobaltochelatase;protein_id=WP_023231725.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 14335 15126 . - . ID=gene-SO06_RS07570;Name=SO06_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07570 NZ_MYDG01000004.1 Protein Homology CDS 14335 15126 . - 0 ID=cds-WP_023231724.1;Parent=gene-SO06_RS07570;Dbxref=GenBank:WP_023231724.1;Name=WP_023231724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=SO06_RS07570;product=cobalt-precorrin-6A reductase;protein_id=WP_023231724.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 15123 15848 . - . ID=gene-SO06_RS07575;Name=SO06_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07575 NZ_MYDG01000004.1 Protein Homology CDS 15123 15848 . - 0 ID=cds-WP_000953637.1;Parent=gene-SO06_RS07575;Dbxref=GenBank:WP_000953637.1;Name=WP_000953637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=SO06_RS07575;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_000953637.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 15848 16903 . - . ID=gene-SO06_RS07580;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=SO06_RS07580 NZ_MYDG01000004.1 Protein Homology CDS 15848 16903 . - 0 ID=cds-WP_048348871.1;Parent=gene-SO06_RS07580;Dbxref=GenBank:WP_048348871.1;Name=WP_048348871.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=SO06_RS07580;product=cobalt-precorrin 5A hydrolase;protein_id=WP_048348871.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 16884 17657 . - . ID=gene-SO06_RS07585;Name=SO06_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07585 NZ_MYDG01000004.1 Protein Homology CDS 16884 17657 . - 0 ID=cds-WP_000004867.1;Parent=gene-SO06_RS07585;Dbxref=GenBank:WP_000004867.1;Name=WP_000004867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=SO06_RS07585;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_000004867.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 17641 18219 . - . ID=gene-SO06_RS07590;Name=SO06_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07590 NZ_MYDG01000004.1 Protein Homology CDS 17641 18219 . - 0 ID=cds-WP_023231721.1;Parent=gene-SO06_RS07590;Dbxref=GenBank:WP_023231721.1;Name=WP_023231721.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=SO06_RS07590;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_023231721.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 18209 18814 . - . ID=gene-SO06_RS07595;Name=SO06_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07595 NZ_MYDG01000004.1 Protein Homology CDS 18209 18814 . - 0 ID=cds-WP_000958841.1;Parent=gene-SO06_RS07595;Dbxref=GenBank:WP_000958841.1;Name=WP_000958841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=SO06_RS07595;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_000958841.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 18808 19947 . - . ID=gene-SO06_RS07600;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=SO06_RS07600 NZ_MYDG01000004.1 Protein Homology CDS 18808 19947 . - 0 ID=cds-WP_001292917.1;Parent=gene-SO06_RS07600;Dbxref=GenBank:WP_001292917.1;Name=WP_001292917.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=SO06_RS07600;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_001292917.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 19947 20579 . - . ID=gene-SO06_RS07605;Name=SO06_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07605 NZ_MYDG01000004.1 Protein Homology CDS 19947 20579 . - 0 ID=cds-WP_023214779.1;Parent=gene-SO06_RS07605;Dbxref=GenBank:WP_023214779.1;Name=WP_023214779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=SO06_RS07605;product=cobalt-precorrin-8 methylmutase;protein_id=WP_023214779.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 20590 21549 . - . ID=gene-SO06_RS07610;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=SO06_RS07610 NZ_MYDG01000004.1 Protein Homology CDS 20590 21549 . - 0 ID=cds-WP_000153654.1;Parent=gene-SO06_RS07610;Dbxref=GenBank:WP_000153654.1;Name=WP_000153654.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=SO06_RS07610;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_000153654.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 21546 22925 . - . ID=gene-SO06_RS07615;Name=SO06_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07615 NZ_MYDG01000004.1 Protein Homology CDS 21546 22925 . - 0 ID=cds-WP_023231720.1;Parent=gene-SO06_RS07615;Dbxref=GenBank:WP_023231720.1;Name=WP_023231720.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=SO06_RS07615;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_023231720.1;transl_table=11 NZ_MYDG01000004.1 cmsearch riboswitch 23023 23197 . - . ID=id-NZ_MYDG01000004.1:23023..23197;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_MYDG01000004.1 RefSeq gene 23523 24434 . - . ID=gene-SO06_RS07620;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=SO06_RS07620 NZ_MYDG01000004.1 Protein Homology CDS 23523 24434 . - 0 ID=cds-WP_023231719.1;Parent=gene-SO06_RS07620;Dbxref=GenBank:WP_023231719.1;Name=WP_023231719.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,1%2C2-propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=SO06_RS07620;product=transcriptional regulator PocR;protein_id=WP_023231719.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 24651 25445 . - . ID=gene-SO06_RS07625;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=SO06_RS07625 NZ_MYDG01000004.1 Protein Homology CDS 24651 25445 . - 0 ID=cds-WP_001000023.1;Parent=gene-SO06_RS07625;Dbxref=GenBank:WP_001000023.1;Name=WP_001000023.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=SO06_RS07625;product=propanediol diffusion facilitator PduF;protein_id=WP_001000023.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 25970 26254 . + . ID=gene-SO06_RS07630;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=SO06_RS07630 NZ_MYDG01000004.1 Protein Homology CDS 25970 26254 . + 0 ID=cds-WP_001183618.1;Parent=gene-SO06_RS07630;Dbxref=GenBank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=SO06_RS07630;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 26251 27063 . + . ID=gene-SO06_RS07635;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=SO06_RS07635 NZ_MYDG01000004.1 Protein Homology CDS 26251 27063 . + 0 ID=cds-WP_000097492.1;Parent=gene-SO06_RS07635;Dbxref=GenBank:WP_000097492.1;Name=WP_000097492.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=SO06_RS07635;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097492.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 27082 28746 . + . ID=gene-SO06_RS07640;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=SO06_RS07640 NZ_MYDG01000004.1 Protein Homology CDS 27082 28746 . + 0 ID=cds-WP_001256899.1;Parent=gene-SO06_RS07640;Dbxref=GenBank:WP_001256899.1;Name=WP_001256899.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=SO06_RS07640;product=propanediol dehydratase large subunit PduC;protein_id=WP_001256899.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 28757 29431 . + . ID=gene-SO06_RS07645;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=SO06_RS07645 NZ_MYDG01000004.1 Protein Homology CDS 28757 29431 . + 0 ID=cds-WP_000405048.1;Parent=gene-SO06_RS07645;Dbxref=GenBank:WP_000405048.1;Name=WP_000405048.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=SO06_RS07645;product=propanediol dehydratase medium subunit PduD;protein_id=WP_000405048.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 29446 29967 . + . ID=gene-SO06_RS07650;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=SO06_RS07650 NZ_MYDG01000004.1 Protein Homology CDS 29446 29967 . + 0 ID=cds-WP_001090599.1;Parent=gene-SO06_RS07650;Dbxref=GenBank:WP_001090599.1;Name=WP_001090599.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=SO06_RS07650;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090599.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 30174 32006 . + . ID=gene-SO06_RS07655;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=SO06_RS07655 NZ_MYDG01000004.1 Protein Homology CDS 30174 32006 . + 0 ID=cds-WP_023231718.1;Parent=gene-SO06_RS07655;Dbxref=GenBank:WP_023231718.1;Name=WP_023231718.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=SO06_RS07655;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_023231718.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 31996 32346 . + . ID=gene-SO06_RS07660;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=SO06_RS07660 NZ_MYDG01000004.1 Protein Homology CDS 31996 32346 . + 0 ID=cds-WP_000377969.1;Parent=gene-SO06_RS07660;Dbxref=GenBank:WP_000377969.1;Name=WP_000377969.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=SO06_RS07660;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_000377969.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 32365 32640 . + . ID=gene-SO06_RS07665;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=SO06_RS07665 NZ_MYDG01000004.1 Protein Homology CDS 32365 32640 . + 0 ID=cds-WP_001057755.1;Parent=gene-SO06_RS07665;Dbxref=GenBank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=SO06_RS07665;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 32644 33126 . + . ID=gene-SO06_RS07670;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=SO06_RS07670 NZ_MYDG01000004.1 Protein Homology CDS 32644 33126 . + 0 ID=cds-WP_077248383.1;Parent=gene-SO06_RS07670;Dbxref=GenBank:WP_077248383.1;Name=WP_077248383.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=SO06_RS07670;product=propanediol utilization microcompartment protein PduK;protein_id=WP_077248383.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 33126 33758 . + . ID=gene-SO06_RS07675;Name=SO06_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07675 NZ_MYDG01000004.1 Protein Homology CDS 33126 33758 . + 0 ID=cds-WP_023231315.1;Parent=gene-SO06_RS07675;Dbxref=GenBank:WP_023231315.1;Name=WP_023231315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=SO06_RS07675;product=phosphate propanoyltransferase;protein_id=WP_023231315.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 33755 34246 . + . ID=gene-SO06_RS07680;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=SO06_RS07680 NZ_MYDG01000004.1 Protein Homology CDS 33755 34246 . + 0 ID=cds-WP_048348872.1;Parent=gene-SO06_RS07680;Dbxref=GenBank:WP_048348872.1;Name=WP_048348872.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=SO06_RS07680;product=propanediol utilization microcompartment protein PduM;protein_id=WP_048348872.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 34250 34525 . + . ID=gene-SO06_RS07685;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=SO06_RS07685 NZ_MYDG01000004.1 Protein Homology CDS 34250 34525 . + 0 ID=cds-WP_000549825.1;Parent=gene-SO06_RS07685;Dbxref=GenBank:WP_000549825.1;Name=WP_000549825.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=SO06_RS07685;product=propanediol utilization microcompartment protein PduN;protein_id=WP_000549825.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 34535 35545 . + . ID=gene-SO06_RS07690;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=SO06_RS07690 NZ_MYDG01000004.1 Protein Homology CDS 34535 35545 . + 0 ID=cds-WP_023231312.1;Parent=gene-SO06_RS07690;Dbxref=GenBank:WP_023231312.1;Name=WP_023231312.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=SO06_RS07690;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_023231312.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 35542 36936 . + . ID=gene-SO06_RS07695;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=SO06_RS07695 NZ_MYDG01000004.1 Protein Homology CDS 35542 36936 . + 0 ID=cds-WP_023202805.1;Parent=gene-SO06_RS07695;Dbxref=GenBank:WP_023202805.1;Name=WP_023202805.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=SO06_RS07695;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_023202805.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 36948 38060 . + . ID=gene-SO06_RS07700;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=SO06_RS07700 NZ_MYDG01000004.1 Protein Homology CDS 36948 38060 . + 0 ID=cds-WP_023231311.1;Parent=gene-SO06_RS07700;Dbxref=GenBank:WP_023231311.1;Name=WP_023231311.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=SO06_RS07700;product=1-propanol dehydrogenase PduQ;protein_id=WP_023231311.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 38057 39412 . + . ID=gene-SO06_RS07705;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=SO06_RS07705 NZ_MYDG01000004.1 Protein Homology CDS 38057 39412 . + 0 ID=cds-WP_023231310.1;Parent=gene-SO06_RS07705;Dbxref=GenBank:WP_023231310.1;Name=WP_023231310.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=SO06_RS07705;product=cobalamin reductase PduS;protein_id=WP_023231310.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 39415 39969 . + . ID=gene-SO06_RS07710;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=SO06_RS07710 NZ_MYDG01000004.1 Protein Homology CDS 39415 39969 . + 0 ID=cds-WP_000075777.1;Parent=gene-SO06_RS07710;Dbxref=GenBank:WP_000075777.1;Name=WP_000075777.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=SO06_RS07710;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075777.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 39969 40319 . + . ID=gene-SO06_RS07715;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=SO06_RS07715 NZ_MYDG01000004.1 Protein Homology CDS 39969 40319 . + 0 ID=cds-WP_000441103.1;Parent=gene-SO06_RS07715;Dbxref=GenBank:WP_000441103.1;Name=WP_000441103.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=SO06_RS07715;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441103.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 40324 40776 . + . ID=gene-SO06_RS07720;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=SO06_RS07720 NZ_MYDG01000004.1 Protein Homology CDS 40324 40776 . + 0 ID=cds-WP_000826272.1;Parent=gene-SO06_RS07720;Dbxref=GenBank:WP_000826272.1;Name=WP_000826272.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=SO06_RS07720;product=propanediol utilization protein PduV;protein_id=WP_000826272.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 40761 41975 . + . ID=gene-SO06_RS07725;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=SO06_RS07725 NZ_MYDG01000004.1 Protein Homology CDS 40761 41975 . + 0 ID=cds-WP_020898960.1;Parent=gene-SO06_RS07725;Dbxref=GenBank:WP_020898960.1;Name=WP_020898960.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=SO06_RS07725;product=propanediol utilization propionate kinase PduW;protein_id=WP_020898960.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 42069 42935 . + . ID=gene-SO06_RS07730;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=SO06_RS07730 NZ_MYDG01000004.1 Protein Homology CDS 42069 42935 . + 0 ID=cds-WP_001805106.1;Parent=gene-SO06_RS07730;Dbxref=GenBank:WP_001805106.1;Name=WP_001805106.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=SO06_RS07730;product=L-threonine kinase PduX;protein_id=WP_001805106.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 42969 43304 . - . ID=gene-SO06_RS07735;Name=SO06_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07735 NZ_MYDG01000004.1 Protein Homology CDS 42969 43304 . - 0 ID=cds-WP_000450405.1;Parent=gene-SO06_RS07735;Dbxref=GenBank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=SO06_RS07735;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 43549 44607 . - . ID=gene-SO06_RS07740;Name=SO06_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07740 NZ_MYDG01000004.1 Protein Homology CDS 43549 44607 . - 0 ID=cds-WP_001200858.1;Parent=gene-SO06_RS07740;Dbxref=GenBank:WP_001200858.1;Name=WP_001200858.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=SO06_RS07740;product=FUSC family protein;protein_id=WP_001200858.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 44726 45193 . - . ID=gene-SO06_RS07750;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=SO06_RS07750 NZ_MYDG01000004.1 Protein Homology CDS 44726 45193 . - 0 ID=cds-WP_020898962.1;Parent=gene-SO06_RS07750;Dbxref=GenBank:WP_020898962.1;Name=WP_020898962.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=SO06_RS07750;product=DNA gyrase inhibitor SbmC;protein_id=WP_020898962.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 45344 46516 . - . ID=gene-SO06_RS07755;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=SO06_RS07755 NZ_MYDG01000004.1 Protein Homology CDS 45344 46516 . - 0 ID=cds-WP_000925042.1;Parent=gene-SO06_RS07755;Dbxref=GenBank:WP_000925042.1;Name=WP_000925042.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=SO06_RS07755;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_000925042.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 46640 47404 . - . ID=gene-SO06_RS07760;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=SO06_RS07760 NZ_MYDG01000004.1 Protein Homology CDS 46640 47404 . - 0 ID=cds-WP_001092553.1;Parent=gene-SO06_RS07760;Dbxref=GenBank:WP_001092553.1;Name=WP_001092553.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=SO06_RS07760;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001092553.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 47401 47979 . - . ID=gene-SO06_RS07765;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=SO06_RS07765 NZ_MYDG01000004.1 Protein Homology CDS 47401 47979 . - 0 ID=cds-WP_001016236.1;Parent=gene-SO06_RS07765;Dbxref=GenBank:WP_001016236.1;Name=WP_001016236.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=SO06_RS07765;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016236.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 47994 50270 . - . ID=gene-SO06_RS07770;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=SO06_RS07770 NZ_MYDG01000004.1 Protein Homology CDS 47994 50270 . - 0 ID=cds-WP_023231308.1;Parent=gene-SO06_RS07770;Dbxref=GenBank:WP_023231308.1;Name=WP_023231308.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=SO06_RS07770;product=thiosulfate reductase PhsA;protein_id=WP_023231308.1;transl_table=11 NZ_MYDG01000004.1 RefSeq pseudogene 50530 50622 . - . ID=gene-SO06_RS07775;Name=SO06_RS07775;end_range=50622,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS07775;partial=true;pseudo=true;start_range=.,50530 NZ_MYDG01000004.1 Protein Homology CDS 50530 50622 . - 0 ID=cds-SO06_RS07775;Parent=gene-SO06_RS07775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=50622,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=SO06_RS07775;partial=true;product=heavy metal-binding domain-containing protein;pseudo=true;start_range=.,50530;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 50889 53237 . + . ID=gene-SO06_RS07785;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=SO06_RS07785 NZ_MYDG01000004.1 Protein Homology CDS 50889 53237 . + 0 ID=cds-WP_023231307.1;Parent=gene-SO06_RS07785;Dbxref=GenBank:WP_023231307.1;Name=WP_023231307.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=SO06_RS07785;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=WP_023231307.1;transl_table=11 NZ_MYDG01000004.1 RefSeq pseudogene 53367 53444 . - . ID=gene-SO06_RS25505;Name=SO06_RS25505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25505;partial=true;pseudo=true;start_range=.,53367 NZ_MYDG01000004.1 Protein Homology CDS 53367 53444 . - 0 ID=cds-SO06_RS25505;Parent=gene-SO06_RS25505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=SO06_RS25505;partial=true;product=hypothetical protein;pseudo=true;start_range=.,53367;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 53604 55034 . + . ID=gene-SO06_RS07790;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=SO06_RS07790 NZ_MYDG01000004.1 Protein Homology CDS 53604 55034 . + 0 ID=cds-WP_000216702.1;Parent=gene-SO06_RS07790;Dbxref=GenBank:WP_000216702.1;Name=WP_000216702.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=SO06_RS07790;product=exodeoxyribonuclease I;protein_id=WP_000216702.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 55170 56528 . - . ID=gene-SO06_RS07795;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=SO06_RS07795 NZ_MYDG01000004.1 Protein Homology CDS 55170 56528 . - 0 ID=cds-WP_001519005.1;Parent=gene-SO06_RS07795;Dbxref=GenBank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=SO06_RS07795;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 56518 56580 . - . ID=gene-SO06_RS24970;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=SO06_RS24970 NZ_MYDG01000004.1 Protein Homology CDS 56518 56580 . - 0 ID=cds-WP_096335044.1;Parent=gene-SO06_RS24970;Dbxref=GenBank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=SO06_RS24970;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 56814 57728 . - . ID=gene-SO06_RS07800;Name=SO06_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07800 NZ_MYDG01000004.1 Protein Homology CDS 56814 57728 . - 0 ID=cds-WP_000803316.1;Parent=gene-SO06_RS07800;Dbxref=GenBank:WP_000803316.1;Name=WP_000803316.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=SO06_RS07800;product=LysR family transcriptional regulator;protein_id=WP_000803316.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 57774 58598 . - . ID=gene-SO06_RS07805;Name=SO06_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07805 NZ_MYDG01000004.1 Protein Homology CDS 57774 58598 . - 0 ID=cds-WP_000754712.1;Parent=gene-SO06_RS07805;Dbxref=GenBank:WP_000754712.1;Name=WP_000754712.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=SO06_RS07805;product=SDR family oxidoreductase;protein_id=WP_000754712.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 58761 58811 . + . ID=gene-SO06_RS24975;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=SO06_RS24975 NZ_MYDG01000004.1 Protein Homology CDS 58761 58811 . + 0 ID=cds-WP_001364200.1;Parent=gene-SO06_RS24975;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=SO06_RS24975;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_MYDG01000004.1 cmsearch sequence_feature 58787 58910 . + . ID=id-NZ_MYDG01000004.1:58787..58910;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_MYDG01000004.1 RefSeq gene 58957 59856 . + . ID=gene-SO06_RS07810;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=SO06_RS07810 NZ_MYDG01000004.1 Protein Homology CDS 58957 59856 . + 0 ID=cds-WP_000886600.1;Parent=gene-SO06_RS07810;Dbxref=GenBank:WP_000886600.1;Name=WP_000886600.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=SO06_RS07810;product=ATP phosphoribosyltransferase;protein_id=WP_000886600.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 59959 61263 . + . ID=gene-SO06_RS07815;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=SO06_RS07815 NZ_MYDG01000004.1 Protein Homology CDS 59959 61263 . + 0 ID=cds-WP_023231306.1;Parent=gene-SO06_RS07815;Dbxref=GenBank:WP_023231306.1;Name=WP_023231306.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=SO06_RS07815;product=histidinol dehydrogenase;protein_id=WP_023231306.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 61260 62339 . + . ID=gene-SO06_RS07820;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=SO06_RS07820 NZ_MYDG01000004.1 Protein Homology CDS 61260 62339 . + 0 ID=cds-WP_000102715.1;Parent=gene-SO06_RS07820;Dbxref=GenBank:WP_000102715.1;Name=WP_000102715.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=SO06_RS07820;product=histidinol-phosphate transaminase;protein_id=WP_000102715.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 62336 63403 . + . ID=gene-SO06_RS07825;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=SO06_RS07825 NZ_MYDG01000004.1 Protein Homology CDS 62336 63403 . + 0 ID=cds-WP_023231305.1;Parent=gene-SO06_RS07825;Dbxref=GenBank:WP_023231305.1;Name=WP_023231305.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=SO06_RS07825;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_023231305.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 63403 63993 . + . ID=gene-SO06_RS07830;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=SO06_RS07830 NZ_MYDG01000004.1 Protein Homology CDS 63403 63993 . + 0 ID=cds-WP_001103591.1;Parent=gene-SO06_RS07830;Dbxref=GenBank:WP_001103591.1;Name=WP_001103591.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=SO06_RS07830;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103591.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 63993 64730 . + . ID=gene-SO06_RS07835;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=SO06_RS07835 NZ_MYDG01000004.1 Protein Homology CDS 63993 64730 . + 0 ID=cds-WP_000586406.1;Parent=gene-SO06_RS07835;Dbxref=GenBank:WP_000586406.1;Name=WP_000586406.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=SO06_RS07835;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586406.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 64712 65488 . + . ID=gene-SO06_RS07840;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=SO06_RS07840 NZ_MYDG01000004.1 Protein Homology CDS 64712 65488 . + 0 ID=cds-WP_000880125.1;Parent=gene-SO06_RS07840;Dbxref=GenBank:WP_000880125.1;Name=WP_000880125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=SO06_RS07840;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 65482 66093 . + . ID=gene-SO06_RS07845;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=SO06_RS07845 NZ_MYDG01000004.1 Protein Homology CDS 65482 66093 . + 0 ID=cds-WP_017441797.1;Parent=gene-SO06_RS07845;Dbxref=GenBank:WP_017441797.1;Name=WP_017441797.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=SO06_RS07845;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_017441797.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 66173 67156 . - . ID=gene-SO06_RS07850;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=SO06_RS07850 NZ_MYDG01000004.1 Protein Homology CDS 66173 67156 . - 0 ID=cds-WP_023231304.1;Parent=gene-SO06_RS07850;Dbxref=GenBank:WP_023231304.1;Name=WP_023231304.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=SO06_RS07850;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_023231304.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 67299 68465 . - . ID=gene-SO06_RS07855;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=SO06_RS07855 NZ_MYDG01000004.1 Protein Homology CDS 67299 68465 . - 0 ID=cds-WP_000704825.1;Parent=gene-SO06_RS07855;Dbxref=GenBank:WP_000704825.1;Name=WP_000704825.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=SO06_RS07855;product=UDP-glucose 6-dehydrogenase;protein_id=WP_000704825.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 68702 70108 . - . ID=gene-SO06_RS07865;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=SO06_RS07865 NZ_MYDG01000004.1 Protein Homology CDS 68702 70108 . - 0 ID=cds-WP_023231303.1;Parent=gene-SO06_RS07865;Dbxref=GenBank:WP_023231303.1;Name=WP_023231303.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=SO06_RS07865;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_023231303.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 70272 71702 . - . ID=gene-SO06_RS07870;Name=SO06_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07870 NZ_MYDG01000004.1 Protein Homology CDS 70272 71702 . - 0 ID=cds-WP_023181972.1;Parent=gene-SO06_RS07870;Dbxref=GenBank:WP_023181972.1;Name=WP_023181972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=SO06_RS07870;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=WP_023181972.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 71774 73207 . - . ID=gene-SO06_RS07875;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=SO06_RS07875 NZ_MYDG01000004.1 Protein Homology CDS 71774 73207 . - 0 ID=cds-WP_023181971.1;Parent=gene-SO06_RS07875;Dbxref=GenBank:WP_023181971.1;Name=WP_023181971.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461028.1;locus_tag=SO06_RS07875;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=WP_023181971.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 73194 74633 . - . ID=gene-SO06_RS07880;Name=SO06_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07880 NZ_MYDG01000004.1 Protein Homology CDS 73194 74633 . - 0 ID=cds-WP_023231302.1;Parent=gene-SO06_RS07880;Dbxref=GenBank:WP_023231302.1;Name=WP_023231302.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=SO06_RS07880;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_023231302.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 74634 75578 . - . ID=gene-SO06_RS07885;Name=rfbN;gbkey=Gene;gene=rfbN;gene_biotype=protein_coding;locus_tag=SO06_RS07885 NZ_MYDG01000004.1 Protein Homology CDS 74634 75578 . - 0 ID=cds-WP_023231301.1;Parent=gene-SO06_RS07885;Dbxref=GenBank:WP_023231301.1;Name=WP_023231301.1;gbkey=CDS;gene=rfbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461030.1;locus_tag=SO06_RS07885;product=O antigen biosynthesis rhamnosyltransferase RfbN;protein_id=WP_023231301.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 75579 76640 . - . ID=gene-SO06_RS07890;Name=SO06_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07890 NZ_MYDG01000004.1 Protein Homology CDS 75579 76640 . - 0 ID=cds-WP_048348874.1;Parent=gene-SO06_RS07890;Dbxref=GenBank:WP_048348874.1;Name=WP_048348874.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461031.1;locus_tag=SO06_RS07890;product=glycosyltransferase family 4 protein;protein_id=WP_048348874.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 76959 77960 . - . ID=gene-SO06_RS07895;Name=rfbV;gbkey=Gene;gene=rfbV;gene_biotype=protein_coding;locus_tag=SO06_RS07895 NZ_MYDG01000004.1 Protein Homology CDS 76959 77960 . - 0 ID=cds-WP_023231300.1;Parent=gene-SO06_RS07895;Dbxref=GenBank:WP_023231300.1;Name=WP_023231300.1;gbkey=CDS;gene=rfbV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461032.1;locus_tag=SO06_RS07895;product=abequosyltransferase RfbV;protein_id=WP_023231300.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 77965 79257 . - . ID=gene-SO06_RS07900;Name=SO06_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07900 NZ_MYDG01000004.1 Protein Homology CDS 77965 79257 . - 0 ID=cds-WP_077941719.1;Parent=gene-SO06_RS07900;Dbxref=GenBank:WP_077941719.1;Name=WP_077941719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461033.1;locus_tag=SO06_RS07900;product=MATE family efflux transporter;protein_id=WP_077941719.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 79339 80238 . - . ID=gene-SO06_RS07905;Name=rfbJ;gbkey=Gene;gene=rfbJ;gene_biotype=protein_coding;locus_tag=SO06_RS07905 NZ_MYDG01000004.1 Protein Homology CDS 79339 80238 . - 0 ID=cds-WP_023231298.1;Parent=gene-SO06_RS07905;Dbxref=GenBank:WP_023231298.1;Name=WP_023231298.1;gbkey=CDS;gene=rfbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461034.1;locus_tag=SO06_RS07905;product=CDP-abequose synthase;protein_id=WP_023231298.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 80266 81579 . - . ID=gene-SO06_RS07910;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=SO06_RS07910 NZ_MYDG01000004.1 Protein Homology CDS 80266 81579 . - 0 ID=cds-WP_023231297.1;Parent=gene-SO06_RS07910;Dbxref=GenBank:WP_023231297.1;Name=WP_023231297.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=SO06_RS07910;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WP_023231297.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 81606 82685 . - . ID=gene-SO06_RS07915;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=SO06_RS07915 NZ_MYDG01000004.1 Protein Homology CDS 81606 82685 . - 0 ID=cds-WP_023231296.1;Parent=gene-SO06_RS07915;Dbxref=GenBank:WP_023231296.1;Name=WP_023231296.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=SO06_RS07915;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_023231296.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 82690 83463 . - . ID=gene-SO06_RS07920;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=SO06_RS07920 NZ_MYDG01000004.1 Protein Homology CDS 82690 83463 . - 0 ID=cds-WP_000648783.1;Parent=gene-SO06_RS07920;Dbxref=GenBank:WP_000648783.1;Name=WP_000648783.1;Ontology_term=GO:0009243,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=SO06_RS07920;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_000648783.1;transl_table=11 NZ_MYDG01000004.1 RefSeq pseudogene 83460 84453 . - . ID=gene-SO06_RS07925;Name=SO06_RS07925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS07925;pseudo=true NZ_MYDG01000004.1 Protein Homology CDS 83460 84453 . - 0 ID=cds-SO06_RS07925;Parent=gene-SO06_RS07925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=SO06_RS07925;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;pseudo=true;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 84459 85010 . - . ID=gene-SO06_RS07930;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=SO06_RS07930 NZ_MYDG01000004.1 Protein Homology CDS 84459 85010 . - 0 ID=cds-WP_000973709.1;Parent=gene-SO06_RS07930;Dbxref=GenBank:WP_000973709.1;Name=WP_000973709.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=SO06_RS07930;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_000973709.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 85011 85889 . - . ID=gene-SO06_RS07935;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=SO06_RS07935 NZ_MYDG01000004.1 Protein Homology CDS 85011 85889 . - 0 ID=cds-WP_023181969.1;Parent=gene-SO06_RS07935;Dbxref=GenBank:WP_023181969.1;Name=WP_023181969.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=SO06_RS07935;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_023181969.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 85937 86836 . - . ID=gene-SO06_RS07940;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=SO06_RS07940 NZ_MYDG01000004.1 Protein Homology CDS 85937 86836 . - 0 ID=cds-WP_001023661.1;Parent=gene-SO06_RS07940;Dbxref=GenBank:WP_001023661.1;Name=WP_001023661.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=SO06_RS07940;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_001023661.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 86836 87921 . - . ID=gene-SO06_RS07945;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=SO06_RS07945 NZ_MYDG01000004.1 Protein Homology CDS 86836 87921 . - 0 ID=cds-WP_024158618.1;Parent=gene-SO06_RS07945;Dbxref=GenBank:WP_024158618.1;Name=WP_024158618.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=SO06_RS07945;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_024158618.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 88298 89191 . - . ID=gene-SO06_RS07950;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=SO06_RS07950 NZ_MYDG01000004.1 Protein Homology CDS 88298 89191 . - 0 ID=cds-WP_000981469.1;Parent=gene-SO06_RS07950;Dbxref=GenBank:WP_000981469.1;Name=WP_000981469.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=SO06_RS07950;product=GalU regulator GalF;protein_id=WP_000981469.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 89369 90772 . - . ID=gene-SO06_RS07955;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=SO06_RS07955 NZ_MYDG01000004.1 Protein Homology CDS 89369 90772 . - 0 ID=cds-WP_080204182.1;Parent=gene-SO06_RS07955;Dbxref=GenBank:WP_080204182.1;Name=WP_080204182.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=SO06_RS07955;product=colanic acid biosynthesis protein WcaM;protein_id=WP_080204182.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 90783 92003 . - . ID=gene-SO06_RS07960;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=SO06_RS07960 NZ_MYDG01000004.1 Protein Homology CDS 90783 92003 . - 0 ID=cds-WP_080204183.1;Parent=gene-SO06_RS07960;Dbxref=GenBank:WP_080204183.1;Name=WP_080204183.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=SO06_RS07960;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_080204183.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 92000 93280 . - . ID=gene-SO06_RS07965;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=SO06_RS07965 NZ_MYDG01000004.1 Protein Homology CDS 92000 93280 . - 0 ID=cds-WP_023231292.1;Parent=gene-SO06_RS07965;Dbxref=GenBank:WP_023231292.1;Name=WP_023231292.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=SO06_RS07965;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_023231292.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 93302 94780 . - . ID=gene-SO06_RS07970;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=SO06_RS07970 NZ_MYDG01000004.1 Protein Homology CDS 93302 94780 . - 0 ID=cds-WP_000058681.1;Parent=gene-SO06_RS07970;Dbxref=GenBank:WP_000058681.1;Name=WP_000058681.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=SO06_RS07970;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_000058681.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 94882 96276 . - . ID=gene-SO06_RS07975;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=SO06_RS07975 NZ_MYDG01000004.1 Protein Homology CDS 94882 96276 . - 0 ID=cds-WP_000183163.1;Parent=gene-SO06_RS07975;Dbxref=GenBank:WP_000183163.1;Name=WP_000183163.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=SO06_RS07975;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183163.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 96330 97700 . - . ID=gene-SO06_RS07980;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=SO06_RS07980 NZ_MYDG01000004.1 Protein Homology CDS 96330 97700 . - 0 ID=cds-WP_023231291.1;Parent=gene-SO06_RS07980;Dbxref=GenBank:WP_023231291.1;Name=WP_023231291.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=SO06_RS07980;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_023231291.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 97811 99253 . - . ID=gene-SO06_RS07985;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=SO06_RS07985 NZ_MYDG01000004.1 Protein Homology CDS 97811 99253 . - 0 ID=cds-WP_000605946.1;Parent=gene-SO06_RS07985;Dbxref=GenBank:WP_000605946.1;Name=WP_000605946.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=SO06_RS07985;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000605946.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 99250 100473 . - . ID=gene-SO06_RS07990;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=SO06_RS07990 NZ_MYDG01000004.1 Protein Homology CDS 99250 100473 . - 0 ID=cds-WP_023231347.1;Parent=gene-SO06_RS07990;Dbxref=GenBank:WP_023231347.1;Name=WP_023231347.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=SO06_RS07990;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_023231347.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 100470 100943 . - . ID=gene-SO06_RS07995;Name=SO06_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS07995 NZ_MYDG01000004.1 Protein Homology CDS 100470 100943 . - 0 ID=cds-WP_001748574.1;Parent=gene-SO06_RS07995;Dbxref=GenBank:WP_001748574.1;Name=WP_001748574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=SO06_RS07995;product=GDP-mannose mannosyl hydrolase;protein_id=WP_001748574.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 100946 101911 . - . ID=gene-SO06_RS08000;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=SO06_RS08000 NZ_MYDG01000004.1 Protein Homology CDS 100946 101911 . - 0 ID=cds-WP_023231345.1;Parent=gene-SO06_RS08000;Dbxref=GenBank:WP_023231345.1;Name=WP_023231345.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=SO06_RS08000;product=GDP-L-fucose synthase;protein_id=WP_023231345.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 101914 103035 . - . ID=gene-SO06_RS08005;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=SO06_RS08005 NZ_MYDG01000004.1 Protein Homology CDS 101914 103035 . - 0 ID=cds-WP_000048165.1;Parent=gene-SO06_RS08005;Dbxref=GenBank:WP_000048165.1;Name=WP_000048165.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=SO06_RS08005;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048165.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 103059 103613 . - . ID=gene-SO06_RS08010;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=SO06_RS08010 NZ_MYDG01000004.1 Protein Homology CDS 103059 103613 . - 0 ID=cds-WP_001153603.1;Parent=gene-SO06_RS08010;Dbxref=GenBank:WP_001153603.1;Name=WP_001153603.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=SO06_RS08010;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153603.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 103629 104375 . - . ID=gene-SO06_RS08015;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=SO06_RS08015 NZ_MYDG01000004.1 Protein Homology CDS 103629 104375 . - 0 ID=cds-WP_000480132.1;Parent=gene-SO06_RS08015;Dbxref=GenBank:WP_000480132.1;Name=WP_000480132.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=SO06_RS08015;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000480132.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 104388 105602 . - . ID=gene-SO06_RS08020;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=SO06_RS08020 NZ_MYDG01000004.1 Protein Homology CDS 104388 105602 . - 0 ID=cds-WP_000091392.1;Parent=gene-SO06_RS08020;Dbxref=GenBank:WP_000091392.1;Name=WP_000091392.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=SO06_RS08020;product=colanic acid polymerase WcaD;protein_id=WP_000091392.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 105577 106794 . - . ID=gene-SO06_RS08025;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=SO06_RS08025 NZ_MYDG01000004.1 Protein Homology CDS 105577 106794 . - 0 ID=cds-WP_023231344.1;Parent=gene-SO06_RS08025;Dbxref=GenBank:WP_023231344.1;Name=WP_023231344.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=SO06_RS08025;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_023231344.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 106791 107279 . - . ID=gene-SO06_RS08030;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=SO06_RS08030 NZ_MYDG01000004.1 Protein Homology CDS 106791 107279 . - 0 ID=cds-WP_000888724.1;Parent=gene-SO06_RS08030;Dbxref=GenBank:WP_000888724.1;Name=WP_000888724.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=SO06_RS08030;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888724.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 107282 108124 . - . ID=gene-SO06_RS08035;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=SO06_RS08035 NZ_MYDG01000004.1 Protein Homology CDS 107282 108124 . - 0 ID=cds-WP_000205695.1;Parent=gene-SO06_RS08035;Dbxref=GenBank:WP_000205695.1;Name=WP_000205695.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=SO06_RS08035;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205695.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 108211 110370 . - . ID=gene-SO06_RS08040;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=SO06_RS08040 NZ_MYDG01000004.1 Protein Homology CDS 108211 110370 . - 0 ID=cds-WP_023231343.1;Parent=gene-SO06_RS08040;Dbxref=GenBank:WP_023231343.1;Name=WP_023231343.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=SO06_RS08040;product=tyrosine-protein kinase Wzc;protein_id=WP_023231343.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 110367 110816 . - . ID=gene-SO06_RS08045;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=SO06_RS08045 NZ_MYDG01000004.1 Protein Homology CDS 110367 110816 . - 0 ID=cds-WP_000482226.1;Parent=gene-SO06_RS08045;Dbxref=GenBank:WP_000482226.1;Name=WP_000482226.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=SO06_RS08045;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482226.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 110822 111961 . - . ID=gene-SO06_RS08050;Name=SO06_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08050 NZ_MYDG01000004.1 Protein Homology CDS 110822 111961 . - 0 ID=cds-WP_000978076.1;Parent=gene-SO06_RS08050;Dbxref=GenBank:WP_000978076.1;Name=WP_000978076.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=SO06_RS08050;product=polysaccharide export protein;protein_id=WP_000978076.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 112636 114216 . + . ID=gene-SO06_RS08060;Name=SO06_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08060 NZ_MYDG01000004.1 Protein Homology CDS 112636 114216 . + 0 ID=cds-WP_023231342.1;Parent=gene-SO06_RS08060;Dbxref=GenBank:WP_023231342.1;Name=WP_023231342.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=SO06_RS08060;product=TerC family protein;protein_id=WP_023231342.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 114302 116158 . - . ID=gene-SO06_RS08065;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=SO06_RS08065 NZ_MYDG01000004.1 Protein Homology CDS 114302 116158 . - 0 ID=cds-WP_023231341.1;Parent=gene-SO06_RS08065;Dbxref=GenBank:WP_023231341.1;Name=WP_023231341.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=SO06_RS08065;product=outer membrane assembly protein AsmA;protein_id=WP_023231341.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 116197 116778 . - . ID=gene-SO06_RS08070;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=SO06_RS08070 NZ_MYDG01000004.1 Protein Homology CDS 116197 116778 . - 0 ID=cds-WP_001234783.1;Parent=gene-SO06_RS08070;Dbxref=GenBank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=SO06_RS08070;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 116869 117510 . - . ID=gene-SO06_RS08075;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=SO06_RS08075 NZ_MYDG01000004.1 Protein Homology CDS 116869 117510 . - 0 ID=cds-WP_000132082.1;Parent=gene-SO06_RS08075;Dbxref=GenBank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=SO06_RS08075;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 117841 120831 . + . ID=gene-SO06_RS08080;Name=SO06_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08080 NZ_MYDG01000004.1 Protein Homology CDS 117841 120831 . + 0 ID=cds-WP_023231340.1;Parent=gene-SO06_RS08080;Dbxref=GenBank:WP_023231340.1;Name=WP_023231340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=SO06_RS08080;product=MASE1 domain-containing protein;protein_id=WP_023231340.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 120799 121668 . - . ID=gene-SO06_RS08085;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=SO06_RS08085 NZ_MYDG01000004.1 Protein Homology CDS 120799 121668 . - 0 ID=cds-WP_023195399.1;Parent=gene-SO06_RS08085;Dbxref=GenBank:WP_023195399.1;Name=WP_023195399.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=SO06_RS08085;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_023195399.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 121802 123154 . + . ID=gene-SO06_RS08095;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=SO06_RS08095 NZ_MYDG01000004.1 Protein Homology CDS 121802 123154 . + 0 ID=cds-WP_048348879.1;Parent=gene-SO06_RS08095;Dbxref=GenBank:WP_048348879.1;Name=WP_048348879.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=SO06_RS08095;product=molecular chaperone;protein_id=WP_048348879.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 123253 123312 . - . ID=gene-SO06_RS24980;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=SO06_RS24980 NZ_MYDG01000004.1 Protein Homology CDS 123253 123312 . - 0 ID=cds-WP_001805500.1;Parent=gene-SO06_RS24980;Dbxref=GenBank:WP_001805500.1;Name=WP_001805500.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=SO06_RS24980;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001805500.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 123595 124836 . + . ID=gene-SO06_RS08100;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=SO06_RS08100 NZ_MYDG01000004.1 Protein Homology CDS 123595 124836 . + 0 ID=cds-WP_000678814.1;Parent=gene-SO06_RS08100;Dbxref=GenBank:WP_000678814.1;Name=WP_000678814.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=SO06_RS08100;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000678814.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 124836 127958 . + . ID=gene-SO06_RS08105;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=SO06_RS08105 NZ_MYDG01000004.1 Protein Homology CDS 124836 127958 . + 0 ID=cds-WP_023231577.1;Parent=gene-SO06_RS08105;Dbxref=GenBank:WP_023231577.1;Name=WP_023231577.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=SO06_RS08105;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_023231577.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 127959 131039 . + . ID=gene-SO06_RS08110;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=SO06_RS08110 NZ_MYDG01000004.1 Protein Homology CDS 127959 131039 . + 0 ID=cds-WP_080204184.1;Parent=gene-SO06_RS08110;Dbxref=GenBank:WP_080204184.1;Name=WP_080204184.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=SO06_RS08110;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_080204184.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 131036 132448 . + . ID=gene-SO06_RS08115;Name=SO06_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08115 NZ_MYDG01000004.1 Protein Homology CDS 131036 132448 . + 0 ID=cds-WP_080204185.1;Parent=gene-SO06_RS08115;Dbxref=GenBank:WP_080204185.1;Name=WP_080204185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=SO06_RS08115;product=MFS transporter;protein_id=WP_080204185.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 132448 133851 . + . ID=gene-SO06_RS08120;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=SO06_RS08120 NZ_MYDG01000004.1 Protein Homology CDS 132448 133851 . + 0 ID=cds-WP_023248274.1;Parent=gene-SO06_RS08120;Dbxref=GenBank:WP_023248274.1;Name=WP_023248274.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=SO06_RS08120;product=two-component system sensor histidine kinase BaeS;protein_id=WP_023248274.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 133848 134570 . + . ID=gene-SO06_RS08125;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=SO06_RS08125 NZ_MYDG01000004.1 Protein Homology CDS 133848 134570 . + 0 ID=cds-WP_000137854.1;Parent=gene-SO06_RS08125;Dbxref=GenBank:WP_000137854.1;Name=WP_000137854.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=SO06_RS08125;product=two-component system response regulator BaeR;protein_id=WP_000137854.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 134839 136041 . + . ID=gene-SO06_RS08135;Name=SO06_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08135 NZ_MYDG01000004.1 Protein Homology CDS 134839 136041 . + 0 ID=cds-WP_139777302.1;Parent=gene-SO06_RS08135;Dbxref=GenBank:WP_139777302.1;Name=WP_139777302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=SO06_RS08135;product=cytoplasmic protein;protein_id=WP_139777302.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 136041 136757 . + . ID=gene-SO06_RS08140;Name=SO06_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08140 NZ_MYDG01000004.1 Protein Homology CDS 136041 136757 . + 0 ID=cds-WP_000498587.1;Parent=gene-SO06_RS08140;Dbxref=GenBank:WP_000498587.1;Name=WP_000498587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=SO06_RS08140;product=DUF1266 domain-containing protein;protein_id=WP_000498587.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 136768 138879 . + . ID=gene-SO06_RS08145;Name=SO06_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08145 NZ_MYDG01000004.1 Protein Homology CDS 136768 138879 . + 0 ID=cds-WP_080204186.1;Parent=gene-SO06_RS08145;Dbxref=GenBank:WP_080204186.1;Name=WP_080204186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=SO06_RS08145;product=DUF4034 domain-containing protein;protein_id=WP_080204186.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 138884 139603 . + . ID=gene-SO06_RS08150;Name=SO06_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08150 NZ_MYDG01000004.1 Protein Homology CDS 138884 139603 . + 0 ID=cds-WP_080204187.1;Parent=gene-SO06_RS08150;Dbxref=GenBank:WP_080204187.1;Name=WP_080204187.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586683.1;locus_tag=SO06_RS08150;product=tetratricopeptide repeat protein;protein_id=WP_080204187.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 139731 140471 . - . ID=gene-SO06_RS08155;Name=SO06_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08155 NZ_MYDG01000004.1 Protein Homology CDS 139731 140471 . - 0 ID=cds-WP_080204199.1;Parent=gene-SO06_RS08155;Dbxref=GenBank:WP_080204199.1;Name=WP_080204199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497704.1;locus_tag=SO06_RS08155;product=hypothetical protein;protein_id=WP_080204199.1;transl_table=11 NZ_MYDG01000004.1 RefSeq pseudogene 140586 140786 . - . ID=gene-SO06_RS25510;Name=SO06_RS25510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25510;partial=true;pseudo=true;start_range=.,140586 NZ_MYDG01000004.1 Protein Homology CDS 140586 140786 . - 0 ID=cds-SO06_RS25510;Parent=gene-SO06_RS25510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=SO06_RS25510;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,140586;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 140927 141424 . - . ID=gene-SO06_RS08165;Name=SO06_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08165 NZ_MYDG01000004.1 Protein Homology CDS 140927 141424 . - 0 ID=cds-WP_000037401.1;Parent=gene-SO06_RS08165;Dbxref=GenBank:WP_000037401.1;Name=WP_000037401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000037626.1;locus_tag=SO06_RS08165;product=hypothetical protein;protein_id=WP_000037401.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 141624 142001 . - . ID=gene-SO06_RS08170;Name=SO06_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08170 NZ_MYDG01000004.1 Protein Homology CDS 141624 142001 . - 0 ID=cds-WP_079984442.1;Parent=gene-SO06_RS08170;Dbxref=GenBank:WP_079984442.1;Name=WP_079984442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357876.1;locus_tag=SO06_RS08170;product=hypothetical protein;protein_id=WP_079984442.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 142370 142804 . - . ID=gene-SO06_RS08175;Name=SO06_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08175 NZ_MYDG01000004.1 Protein Homology CDS 142370 142804 . - 0 ID=cds-WP_080204188.1;Parent=gene-SO06_RS08175;Dbxref=GenBank:WP_080204188.1;Name=WP_080204188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001213035.1;locus_tag=SO06_RS08175;product=sel1 repeat family protein;protein_id=WP_080204188.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 143009 143875 . - . ID=gene-SO06_RS08180;Name=SO06_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08180 NZ_MYDG01000004.1 Protein Homology CDS 143009 143875 . - 0 ID=cds-WP_080204189.1;Parent=gene-SO06_RS08180;Dbxref=GenBank:WP_080204189.1;Name=WP_080204189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864146.1;locus_tag=SO06_RS08180;product=HEAT repeat domain-containing protein;protein_id=WP_080204189.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 143937 144140 . - . ID=gene-SO06_RS25690;Name=SO06_RS25690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25690 NZ_MYDG01000004.1 Protein Homology CDS 143937 144140 . - 0 ID=cds-WP_133308360.1;Parent=gene-SO06_RS25690;Dbxref=GenBank:WP_133308360.1;Name=WP_133308360.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026944.6;locus_tag=SO06_RS25690;product=polymorphic toxin type 34 domain-containing protein;protein_id=WP_133308360.1;transl_table=11 NZ_MYDG01000004.1 RefSeq pseudogene 144091 144318 . - . ID=gene-SO06_RS08185;Name=SO06_RS08185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS08185;partial=true;pseudo=true;start_range=.,144091 NZ_MYDG01000004.1 Protein Homology CDS 144091 144318 . - 0 ID=cds-SO06_RS08185;Parent=gene-SO06_RS08185;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=SO06_RS08185;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,144091;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 144382 144645 . - . ID=gene-SO06_RS08190;Name=SO06_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08190 NZ_MYDG01000004.1 GeneMarkS-2+ CDS 144382 144645 . - 0 ID=cds-WP_174565985.1;Parent=gene-SO06_RS08190;Dbxref=GenBank:WP_174565985.1;Name=WP_174565985.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS08190;product=hypothetical protein;protein_id=WP_174565985.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 144730 145110 . - . ID=gene-SO06_RS08195;Name=SO06_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08195 NZ_MYDG01000004.1 Protein Homology CDS 144730 145110 . - 0 ID=cds-WP_023235690.1;Parent=gene-SO06_RS08195;Dbxref=GenBank:WP_023235690.1;Name=WP_023235690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727381.1;locus_tag=SO06_RS08195;product=hypothetical protein;protein_id=WP_023235690.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 145188 145556 . - . ID=gene-SO06_RS25340;Name=SO06_RS25340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25340 NZ_MYDG01000004.1 GeneMarkS-2+ CDS 145188 145556 . - 0 ID=cds-WP_198661949.1;Parent=gene-SO06_RS25340;Dbxref=GenBank:WP_198661949.1;Name=WP_198661949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS25340;product=hypothetical protein;protein_id=WP_198661949.1;transl_table=11 NZ_MYDG01000004.1 RefSeq pseudogene 145709 145912 . - . ID=gene-SO06_RS25345;Name=SO06_RS25345;end_range=145912,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25345;partial=true;pseudo=true;start_range=.,145709 NZ_MYDG01000004.1 Protein Homology CDS 145709 145912 . - 0 ID=cds-SO06_RS25345;Parent=gene-SO06_RS25345;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=145912,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=SO06_RS25345;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,145709;transl_table=11 NZ_MYDG01000004.1 RefSeq pseudogene 146407 146704 . - . ID=gene-SO06_RS24990;Name=SO06_RS24990;end_range=146704,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS24990;partial=true;pseudo=true;start_range=.,146407 NZ_MYDG01000004.1 Protein Homology CDS 146407 146704 . - 0 ID=cds-SO06_RS24990;Parent=gene-SO06_RS24990;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=146704,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=SO06_RS24990;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,146407;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 147092 147535 . - . ID=gene-SO06_RS08210;Name=SO06_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08210 NZ_MYDG01000004.1 Protein Homology CDS 147092 147535 . - 0 ID=cds-WP_080204190.1;Parent=gene-SO06_RS08210;Dbxref=GenBank:WP_080204190.1;Name=WP_080204190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646715.1;locus_tag=SO06_RS08210;product=hypothetical protein;protein_id=WP_080204190.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 148083 148502 . - . ID=gene-SO06_RS08215;Name=SO06_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08215 NZ_MYDG01000004.1 Protein Homology CDS 148083 148502 . - 0 ID=cds-WP_079951765.1;Parent=gene-SO06_RS08215;Dbxref=GenBank:WP_079951765.1;Name=WP_079951765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502176.1;locus_tag=SO06_RS08215;product=hypothetical protein;protein_id=WP_079951765.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 149159 149776 . - . ID=gene-SO06_RS08220;Name=SO06_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08220 NZ_MYDG01000004.1 Protein Homology CDS 149159 149776 . - 0 ID=cds-WP_080204191.1;Parent=gene-SO06_RS08220;Dbxref=GenBank:WP_080204191.1;Name=WP_080204191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528503.1;locus_tag=SO06_RS08220;product=hypothetical protein;protein_id=WP_080204191.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 149940 151301 . + . ID=gene-SO06_RS08225;Name=trhP;gbkey=Gene;gene=trhP;gene_biotype=protein_coding;gene_synonym=yegQ;locus_tag=SO06_RS08225 NZ_MYDG01000004.1 Protein Homology CDS 149940 151301 . + 0 ID=cds-WP_023179264.1;Parent=gene-SO06_RS08225;Dbxref=GenBank:WP_023179264.1;Name=WP_023179264.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhP;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=SO06_RS08225;product=prephenate-dependent tRNA uridine(34) hydroxylase TrhP;protein_id=WP_023179264.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 151752 152798 . + . ID=gene-SO06_RS08230;Name=sseK2;gbkey=Gene;gene=sseK2;gene_biotype=protein_coding;locus_tag=SO06_RS08230 NZ_MYDG01000004.1 Protein Homology CDS 151752 152798 . + 0 ID=cds-WP_001662688.1;Parent=gene-SO06_RS08230;Dbxref=GenBank:WP_001662688.1;Name=WP_001662688.1;gbkey=CDS;gene=sseK2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=SO06_RS08230;product=type III secretion system effector arginine glycosyltransferase SseK2;protein_id=WP_001662688.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 152834 153250 . - . ID=gene-SO06_RS08235;Name=SO06_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08235 NZ_MYDG01000004.1 Protein Homology CDS 152834 153250 . - 0 ID=cds-WP_001555792.1;Parent=gene-SO06_RS08235;Dbxref=GenBank:WP_001555792.1;Name=WP_001555792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=SO06_RS08235;product=CesT family type III secretion system chaperone;protein_id=WP_001555792.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 153372 153707 . - . ID=gene-SO06_RS08240;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=SO06_RS08240 NZ_MYDG01000004.1 Protein Homology CDS 153372 153707 . - 0 ID=cds-WP_080204192.1;Parent=gene-SO06_RS08240;Dbxref=GenBank:WP_080204192.1;Name=WP_080204192.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=SO06_RS08240;product=type III secretion system effector SteD;protein_id=WP_080204192.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 154272 155171 . + . ID=gene-SO06_RS08245;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=SO06_RS08245 NZ_MYDG01000004.1 Protein Homology CDS 154272 155171 . + 0 ID=cds-WP_001273393.1;Parent=gene-SO06_RS08245;Dbxref=GenBank:WP_001273393.1;Name=WP_001273393.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=SO06_RS08245;product=lipid kinase YegS;protein_id=WP_001273393.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 155224 156276 . - . ID=gene-SO06_RS08250;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=SO06_RS08250 NZ_MYDG01000004.1 Protein Homology CDS 155224 156276 . - 0 ID=cds-WP_000129590.1;Parent=gene-SO06_RS08250;Dbxref=GenBank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=SO06_RS08250;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 156530 157801 . + . ID=gene-SO06_RS08255;Name=SO06_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08255 NZ_MYDG01000004.1 Protein Homology CDS 156530 157801 . + 0 ID=cds-WP_000858692.1;Parent=gene-SO06_RS08255;Dbxref=GenBank:WP_000858692.1;Name=WP_000858692.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=SO06_RS08255;product=nucleoside permease;protein_id=WP_000858692.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 157798 158802 . + . ID=gene-SO06_RS08260;Name=SO06_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08260 NZ_MYDG01000004.1 Protein Homology CDS 157798 158802 . + 0 ID=cds-WP_000642793.1;Parent=gene-SO06_RS08260;Dbxref=GenBank:WP_000642793.1;Name=WP_000642793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=SO06_RS08260;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642793.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 158799 159764 . + . ID=gene-SO06_RS08265;Name=SO06_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08265 NZ_MYDG01000004.1 Protein Homology CDS 158799 159764 . + 0 ID=cds-WP_001012665.1;Parent=gene-SO06_RS08265;Dbxref=GenBank:WP_001012665.1;Name=WP_001012665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=SO06_RS08265;product=PfkB family carbohydrate kinase;protein_id=WP_001012665.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 159738 160484 . - . ID=gene-SO06_RS08270;Name=SO06_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08270 NZ_MYDG01000004.1 Protein Homology CDS 159738 160484 . - 0 ID=cds-WP_080204193.1;Parent=gene-SO06_RS08270;Dbxref=GenBank:WP_080204193.1;Name=WP_080204193.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=SO06_RS08270;product=GntR family transcriptional regulator;protein_id=WP_080204193.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 160520 161320 . - . ID=gene-SO06_RS08275;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=SO06_RS08275 NZ_MYDG01000004.1 Protein Homology CDS 160520 161320 . - 0 ID=cds-WP_001188957.1;Parent=gene-SO06_RS08275;Dbxref=GenBank:WP_001188957.1;Name=WP_001188957.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=SO06_RS08275;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_001188957.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 161307 162104 . - . ID=gene-SO06_RS08280;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=SO06_RS08280 NZ_MYDG01000004.1 Protein Homology CDS 161307 162104 . - 0 ID=cds-WP_001182156.1;Parent=gene-SO06_RS08280;Dbxref=GenBank:WP_001182156.1;Name=WP_001182156.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=SO06_RS08280;product=hydroxyethylthiazole kinase;protein_id=WP_001182156.1;transl_table=11 NZ_MYDG01000004.1 cmsearch riboswitch 162136 162232 . - . ID=id-NZ_MYDG01000004.1:162136..162232;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_MYDG01000004.1 RefSeq gene 162514 162828 . + . ID=gene-SO06_RS08285;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=SO06_RS08285 NZ_MYDG01000004.1 Protein Homology CDS 162514 162828 . + 0 ID=cds-WP_000837534.1;Parent=gene-SO06_RS08285;Dbxref=GenBank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=SO06_RS08285;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 163091 164098 . - . ID=gene-SO06_RS08290;Name=SO06_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08290 NZ_MYDG01000004.1 Protein Homology CDS 163091 164098 . - 0 ID=cds-WP_000765280.1;Parent=gene-SO06_RS08290;Dbxref=GenBank:WP_000765280.1;Name=WP_000765280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461093.1;locus_tag=SO06_RS08290;product=putative fimbrial-like adhesin protein;protein_id=WP_000765280.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 164114 166603 . - . ID=gene-SO06_RS08295;Name=SO06_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08295 NZ_MYDG01000004.1 Protein Homology CDS 164114 166603 . - 0 ID=cds-WP_000945363.1;Parent=gene-SO06_RS08295;Dbxref=GenBank:WP_000945363.1;Name=WP_000945363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461094.1;locus_tag=SO06_RS08295;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000945363.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 166617 167300 . - . ID=gene-SO06_RS08300;Name=stcB;gbkey=Gene;gene=stcB;gene_biotype=protein_coding;locus_tag=SO06_RS08300 NZ_MYDG01000004.1 Protein Homology CDS 166617 167300 . - 0 ID=cds-WP_000698775.1;Parent=gene-SO06_RS08300;Dbxref=GenBank:WP_000698775.1;Name=WP_000698775.1;gbkey=CDS;gene=stcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461095.1;locus_tag=SO06_RS08300;product=fimbrial biogenesis chaperone StcB;protein_id=WP_000698775.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 167356 167886 . - . ID=gene-SO06_RS08305;Name=stcA;gbkey=Gene;gene=stcA;gene_biotype=protein_coding;locus_tag=SO06_RS08305 NZ_MYDG01000004.1 Protein Homology CDS 167356 167886 . - 0 ID=cds-WP_031605542.1;Parent=gene-SO06_RS08305;Dbxref=GenBank:WP_031605542.1;Name=WP_031605542.1;gbkey=CDS;gene=stcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461096.1;locus_tag=SO06_RS08305;product=Stc fimbria major subunit StcA;protein_id=WP_031605542.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 168165 168446 . - . ID=gene-SO06_RS08310;Name=SO06_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08310 NZ_MYDG01000004.1 Protein Homology CDS 168165 168446 . - 0 ID=cds-WP_000760404.1;Parent=gene-SO06_RS08310;Dbxref=GenBank:WP_000760404.1;Name=WP_000760404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=SO06_RS08310;product=YehE family protein;protein_id=WP_000760404.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 168724 169833 . - . ID=gene-SO06_RS08315;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=SO06_RS08315 NZ_MYDG01000004.1 Protein Homology CDS 168724 169833 . - 0 ID=cds-WP_001005424.1;Parent=gene-SO06_RS08315;Dbxref=GenBank:WP_001005424.1;Name=WP_001005424.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=SO06_RS08315;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005424.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 169998 172031 . + . ID=gene-SO06_RS08320;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=SO06_RS08320 NZ_MYDG01000004.1 Protein Homology CDS 169998 172031 . + 0 ID=cds-WP_080204194.1;Parent=gene-SO06_RS08320;Dbxref=GenBank:WP_080204194.1;Name=WP_080204194.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=SO06_RS08320;product=methionine--tRNA ligase;protein_id=WP_080204194.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 172272 172730 . + . ID=gene-SO06_RS08325;Name=SO06_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08325 NZ_MYDG01000004.1 Protein Homology CDS 172272 172730 . + 0 ID=cds-WP_000703137.1;Parent=gene-SO06_RS08325;Dbxref=GenBank:WP_000703137.1;Name=WP_000703137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=SO06_RS08325;product=YehR family lipoprotein;protein_id=WP_000703137.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 172902 173432 . + . ID=gene-SO06_RS08330;Name=SO06_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08330 NZ_MYDG01000004.1 Protein Homology CDS 172902 173432 . + 0 ID=cds-WP_001197951.1;Parent=gene-SO06_RS08330;Dbxref=GenBank:WP_001197951.1;Name=WP_001197951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=SO06_RS08330;product=YehR family lipoprotein;protein_id=WP_001197951.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 173489 173956 . - . ID=gene-SO06_RS08335;Name=SO06_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08335 NZ_MYDG01000004.1 Protein Homology CDS 173489 173956 . - 0 ID=cds-WP_000950413.1;Parent=gene-SO06_RS08335;Dbxref=GenBank:WP_000950413.1;Name=WP_000950413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=SO06_RS08335;product=DUF1456 family protein;protein_id=WP_000950413.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 174003 174722 . - . ID=gene-SO06_RS08340;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=SO06_RS08340 NZ_MYDG01000004.1 Protein Homology CDS 174003 174722 . - 0 ID=cds-WP_000598637.1;Parent=gene-SO06_RS08340;Dbxref=GenBank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=SO06_RS08340;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 174719 176404 . - . ID=gene-SO06_RS08345;Name=SO06_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08345 NZ_MYDG01000004.1 Protein Homology CDS 174719 176404 . - 0 ID=cds-WP_000272850.1;Parent=gene-SO06_RS08345;Dbxref=GenBank:WP_000272850.1;Name=WP_000272850.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=SO06_RS08345;product=sensor histidine kinase;protein_id=WP_000272850.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 176627 177358 . + . ID=gene-SO06_RS08350;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=SO06_RS08350 NZ_MYDG01000004.1 Protein Homology CDS 176627 177358 . + 0 ID=cds-WP_001240418.1;Parent=gene-SO06_RS08350;Dbxref=GenBank:WP_001240418.1;Name=WP_001240418.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=SO06_RS08350;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240418.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 177418 177525 . + . ID=gene-SO06_RS08355;Name=SO06_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08355 NZ_MYDG01000004.1 Protein Homology CDS 177418 177525 . + 0 ID=cds-WP_001261696.1;Parent=gene-SO06_RS08355;Dbxref=GenBank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=SO06_RS08355;product=protein YohO;protein_id=WP_001261696.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 177506 178237 . - . ID=gene-SO06_RS08360;Name=SO06_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08360 NZ_MYDG01000004.1 Protein Homology CDS 177506 178237 . - 0 ID=cds-WP_000824854.1;Parent=gene-SO06_RS08360;Dbxref=GenBank:WP_000824854.1;Name=WP_000824854.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=SO06_RS08360;product=ABC transporter permease;protein_id=WP_000824854.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 178221 179168 . - . ID=gene-SO06_RS08365;Name=SO06_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08365 NZ_MYDG01000004.1 Protein Homology CDS 178221 179168 . - 0 ID=cds-WP_000569166.1;Parent=gene-SO06_RS08365;Dbxref=GenBank:WP_000569166.1;Name=WP_000569166.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=SO06_RS08365;product=ABC transporter ATP-binding protein;protein_id=WP_000569166.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 179161 180330 . - . ID=gene-SO06_RS08370;Name=SO06_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08370 NZ_MYDG01000004.1 Protein Homology CDS 179161 180330 . - 0 ID=cds-WP_048348882.1;Parent=gene-SO06_RS08370;Dbxref=GenBank:WP_048348882.1;Name=WP_048348882.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=SO06_RS08370;product=ABC transporter permease;protein_id=WP_048348882.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 180334 181251 . - . ID=gene-SO06_RS08375;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=SO06_RS08375 NZ_MYDG01000004.1 Protein Homology CDS 180334 181251 . - 0 ID=cds-WP_023232024.1;Parent=gene-SO06_RS08375;Dbxref=GenBank:WP_023232024.1;Name=WP_023232024.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=SO06_RS08375;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_023232024.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 181432 183729 . - . ID=gene-SO06_RS08380;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=SO06_RS08380 NZ_MYDG01000004.1 Protein Homology CDS 181432 183729 . - 0 ID=cds-WP_023232025.1;Parent=gene-SO06_RS08380;Dbxref=GenBank:WP_023232025.1;Name=WP_023232025.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=SO06_RS08380;product=beta-glucosidase BglX;protein_id=WP_023232025.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 183996 185726 . + . ID=gene-SO06_RS08385;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=SO06_RS08385 NZ_MYDG01000004.1 Protein Homology CDS 183996 185726 . + 0 ID=cds-WP_000095232.1;Parent=gene-SO06_RS08385;Dbxref=GenBank:WP_000095232.1;Name=WP_000095232.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=SO06_RS08385;product=D-lactate dehydrogenase;protein_id=WP_000095232.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 185784 186731 . - . ID=gene-SO06_RS08390;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=SO06_RS08390 NZ_MYDG01000004.1 Protein Homology CDS 185784 186731 . - 0 ID=cds-WP_000911555.1;Parent=gene-SO06_RS08390;Dbxref=GenBank:WP_000911555.1;Name=WP_000911555.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=SO06_RS08390;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911555.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 186897 187484 . - . ID=gene-SO06_RS08400;Name=SO06_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08400 NZ_MYDG01000004.1 Protein Homology CDS 186897 187484 . - 0 ID=cds-WP_001017057.1;Parent=gene-SO06_RS08400;Dbxref=GenBank:WP_001017057.1;Name=WP_001017057.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=SO06_RS08400;product=Yip1 family protein;protein_id=WP_001017057.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 187643 188212 . + . ID=gene-SO06_RS08405;Name=SO06_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08405 NZ_MYDG01000004.1 Protein Homology CDS 187643 188212 . + 0 ID=cds-WP_001523476.1;Parent=gene-SO06_RS08405;Dbxref=GenBank:WP_001523476.1;Name=WP_001523476.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=SO06_RS08405;product=DedA family protein;protein_id=WP_001523476.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 188261 189022 . - . ID=gene-SO06_RS08410;Name=SO06_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08410 NZ_MYDG01000004.1 Protein Homology CDS 188261 189022 . - 0 ID=cds-WP_000169608.1;Parent=gene-SO06_RS08410;Dbxref=GenBank:WP_000169608.1;Name=WP_000169608.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=SO06_RS08410;product=SDR family oxidoreductase;protein_id=WP_000169608.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 189088 190524 . - . ID=gene-SO06_RS08415;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=SO06_RS08415 NZ_MYDG01000004.1 Protein Homology CDS 189088 190524 . - 0 ID=cds-WP_001081458.1;Parent=gene-SO06_RS08415;Dbxref=GenBank:WP_001081458.1;Name=WP_001081458.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=SO06_RS08415;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001081458.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 190842 190925 . + . ID=gene-SO06_RS08420;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=SO06_RS08420 NZ_MYDG01000004.1 Protein Homology CDS 190842 190925 . + 0 ID=cds-WP_000698460.1;Parent=gene-SO06_RS08420;Dbxref=GenBank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=SO06_RS08420;product=small membrane protein YohP;protein_id=WP_000698460.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 190983 191921 . - . ID=gene-SO06_RS08425;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=SO06_RS08425 NZ_MYDG01000004.1 Protein Homology CDS 190983 191921 . - 0 ID=cds-WP_023232026.1;Parent=gene-SO06_RS08425;Dbxref=GenBank:WP_023232026.1;Name=WP_023232026.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=SO06_RS08425;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_023232026.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 192030 193223 . - . ID=gene-SO06_RS08430;Name=SO06_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08430 NZ_MYDG01000004.1 Protein Homology CDS 192030 193223 . - 0 ID=cds-WP_000150113.1;Parent=gene-SO06_RS08430;Dbxref=GenBank:WP_000150113.1;Name=WP_000150113.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=SO06_RS08430;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_000150113.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 193238 193882 . - . ID=gene-SO06_RS08435;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=SO06_RS08435 NZ_MYDG01000004.1 Protein Homology CDS 193238 193882 . - 0 ID=cds-WP_000781195.1;Parent=gene-SO06_RS08435;Dbxref=GenBank:WP_000781195.1;Name=WP_000781195.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=SO06_RS08435;product=maleylacetoacetate isomerase;protein_id=WP_000781195.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 193891 194592 . - . ID=gene-SO06_RS08440;Name=SO06_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08440 NZ_MYDG01000004.1 Protein Homology CDS 193891 194592 . - 0 ID=cds-WP_000170621.1;Parent=gene-SO06_RS08440;Dbxref=GenBank:WP_000170621.1;Name=WP_000170621.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=SO06_RS08440;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170621.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 194608 195645 . - . ID=gene-SO06_RS08445;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=SO06_RS08445 NZ_MYDG01000004.1 Protein Homology CDS 194608 195645 . - 0 ID=cds-WP_001289857.1;Parent=gene-SO06_RS08445;Dbxref=GenBank:WP_001289857.1;Name=WP_001289857.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=SO06_RS08445;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289857.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 195657 197015 . - . ID=gene-SO06_RS08450;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=SO06_RS08450 NZ_MYDG01000004.1 Protein Homology CDS 195657 197015 . - 0 ID=cds-WP_023232027.1;Parent=gene-SO06_RS08450;Dbxref=GenBank:WP_023232027.1;Name=WP_023232027.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=SO06_RS08450;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_023232027.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 197141 198049 . + . ID=gene-SO06_RS08455;Name=SO06_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08455 NZ_MYDG01000004.1 Protein Homology CDS 197141 198049 . + 0 ID=cds-WP_000024658.1;Parent=gene-SO06_RS08455;Dbxref=GenBank:WP_000024658.1;Name=WP_000024658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=SO06_RS08455;product=LysR substrate-binding domain-containing protein;protein_id=WP_000024658.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 198181 198579 . + . ID=gene-SO06_RS08460;Name=SO06_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08460 NZ_MYDG01000004.1 Protein Homology CDS 198181 198579 . + 0 ID=cds-WP_000045719.1;Parent=gene-SO06_RS08460;Dbxref=GenBank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=SO06_RS08460;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 198576 199271 . + . ID=gene-SO06_RS08465;Name=SO06_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08465 NZ_MYDG01000004.1 Protein Homology CDS 198576 199271 . + 0 ID=cds-WP_000989296.1;Parent=gene-SO06_RS08465;Dbxref=GenBank:WP_000989296.1;Name=WP_000989296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=SO06_RS08465;product=CidB/LrgB family autolysis modulator;protein_id=WP_000989296.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 199425 200309 . + . ID=gene-SO06_RS08470;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=SO06_RS08470 NZ_MYDG01000004.1 Protein Homology CDS 199425 200309 . + 0 ID=cds-WP_000553526.1;Parent=gene-SO06_RS08470;Dbxref=GenBank:WP_000553526.1;Name=WP_000553526.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=SO06_RS08470;product=cytidine deaminase;protein_id=WP_000553526.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 200486 201205 . + . ID=gene-SO06_RS08475;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=SO06_RS08475 NZ_MYDG01000004.1 Protein Homology CDS 200486 201205 . + 0 ID=cds-WP_000920081.1;Parent=gene-SO06_RS08475;Dbxref=GenBank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=SO06_RS08475;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 201202 201447 . + . ID=gene-SO06_RS08480;Name=SO06_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08480 NZ_MYDG01000004.1 Protein Homology CDS 201202 201447 . + 0 ID=cds-WP_000605187.1;Parent=gene-SO06_RS08480;Dbxref=GenBank:WP_000605187.1;Name=WP_000605187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=SO06_RS08480;product=DUF2542 family protein;protein_id=WP_000605187.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 201652 202893 . + . ID=gene-SO06_RS08485;Name=SO06_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08485 NZ_MYDG01000004.1 Protein Homology CDS 201652 202893 . + 0 ID=cds-WP_023202763.1;Parent=gene-SO06_RS08485;Dbxref=GenBank:WP_023202763.1;Name=WP_023202763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=SO06_RS08485;product=NAD(P)-dependent oxidoreductase;protein_id=WP_023202763.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 202887 204122 . + . ID=gene-SO06_RS08490;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=SO06_RS08490 NZ_MYDG01000004.1 Protein Homology CDS 202887 204122 . + 0 ID=cds-WP_000956095.1;Parent=gene-SO06_RS08490;Dbxref=GenBank:WP_000956095.1;Name=WP_000956095.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=SO06_RS08490;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956095.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 204197 205207 . - . ID=gene-SO06_RS08495;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=SO06_RS08495 NZ_MYDG01000004.1 Protein Homology CDS 204197 205207 . - 0 ID=cds-WP_001275101.1;Parent=gene-SO06_RS08495;Dbxref=GenBank:WP_001275101.1;Name=WP_001275101.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=SO06_RS08495;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275101.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 205223 206743 . - . ID=gene-SO06_RS08500;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=SO06_RS08500 NZ_MYDG01000004.1 Protein Homology CDS 205223 206743 . - 0 ID=cds-WP_000535907.1;Parent=gene-SO06_RS08500;Dbxref=GenBank:WP_000535907.1;Name=WP_000535907.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461134.1;locus_tag=SO06_RS08500;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_000535907.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 206877 207875 . - . ID=gene-SO06_RS08505;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=SO06_RS08505 NZ_MYDG01000004.1 Protein Homology CDS 206877 207875 . - 0 ID=cds-WP_023232028.1;Parent=gene-SO06_RS08505;Dbxref=GenBank:WP_023232028.1;Name=WP_023232028.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=SO06_RS08505;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_023232028.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 208374 209396 . - . ID=gene-SO06_RS08510;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=SO06_RS08510 NZ_MYDG01000004.1 Protein Homology CDS 208374 209396 . - 0 ID=cds-WP_000628631.1;Parent=gene-SO06_RS08510;Dbxref=GenBank:WP_000628631.1;Name=WP_000628631.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=SO06_RS08510;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628631.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 209546 210688 . - . ID=gene-SO06_RS08515;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=SO06_RS08515 NZ_MYDG01000004.1 Protein Homology CDS 209546 210688 . - 0 ID=cds-WP_001518079.1;Parent=gene-SO06_RS08515;Dbxref=GenBank:WP_001518079.1;Name=WP_001518079.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=SO06_RS08515;product=DUF418 domain-containing protein YeiB;protein_id=WP_001518079.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 210703 211371 . - . ID=gene-SO06_RS08520;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=SO06_RS08520 NZ_MYDG01000004.1 Protein Homology CDS 210703 211371 . - 0 ID=cds-WP_001139611.1;Parent=gene-SO06_RS08520;Dbxref=GenBank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=SO06_RS08520;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 211701 212558 . + . ID=gene-SO06_RS08530;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=SO06_RS08530 NZ_MYDG01000004.1 Protein Homology CDS 211701 212558 . + 0 ID=cds-WP_023232524.1;Parent=gene-SO06_RS08530;Dbxref=GenBank:WP_023232524.1;Name=WP_023232524.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=SO06_RS08530;product=S-formylglutathione hydrolase;protein_id=WP_023232524.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 212547 212936 . - . ID=gene-SO06_RS08535;Name=SO06_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08535 NZ_MYDG01000004.1 Protein Homology CDS 212547 212936 . - 0 ID=cds-WP_000876817.1;Parent=gene-SO06_RS08535;Dbxref=GenBank:WP_000876817.1;Name=WP_000876817.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=SO06_RS08535;product=helix-turn-helix domain-containing protein;protein_id=WP_000876817.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 212941 214308 . - . ID=gene-SO06_RS08540;Name=SO06_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08540 NZ_MYDG01000004.1 Protein Homology CDS 212941 214308 . - 0 ID=cds-WP_021000519.1;Parent=gene-SO06_RS08540;Dbxref=GenBank:WP_021000519.1;Name=WP_021000519.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=SO06_RS08540;product=L-serine ammonia-lyase;protein_id=WP_021000519.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 214525 215412 . + . ID=gene-SO06_RS08545;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=SO06_RS08545 NZ_MYDG01000004.1 Protein Homology CDS 214525 215412 . + 0 ID=cds-WP_000022914.1;Parent=gene-SO06_RS08545;Dbxref=GenBank:WP_000022914.1;Name=WP_000022914.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=SO06_RS08545;product=phosphoserine phosphatase SerB;protein_id=WP_000022914.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 215445 216767 . + . ID=gene-SO06_RS08550;Name=SO06_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08550 NZ_MYDG01000004.1 Protein Homology CDS 215445 216767 . + 0 ID=cds-WP_000023806.1;Parent=gene-SO06_RS08550;Dbxref=GenBank:WP_000023806.1;Name=WP_000023806.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=SO06_RS08550;product=MFS transporter;protein_id=WP_000023806.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 216811 218802 . - . ID=gene-SO06_RS08555;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=SO06_RS08555 NZ_MYDG01000004.1 Protein Homology CDS 216811 218802 . - 0 ID=cds-WP_000488255.1;Parent=gene-SO06_RS08555;Dbxref=GenBank:WP_000488255.1;Name=WP_000488255.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=SO06_RS08555;product=catecholate siderophore receptor CirA;protein_id=WP_000488255.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 219149 220618 . - . ID=gene-SO06_RS08565;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=SO06_RS08565 NZ_MYDG01000004.1 Protein Homology CDS 219149 220618 . - 0 ID=cds-WP_000534999.1;Parent=gene-SO06_RS08565;Dbxref=GenBank:WP_000534999.1;Name=WP_000534999.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=SO06_RS08565;product=lysine-specific permease;protein_id=WP_000534999.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 220808 221671 . - . ID=gene-SO06_RS08570;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=SO06_RS08570 NZ_MYDG01000004.1 Protein Homology CDS 220808 221671 . - 0 ID=cds-WP_000548316.1;Parent=gene-SO06_RS08570;Dbxref=GenBank:WP_000548316.1;Name=WP_000548316.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=SO06_RS08570;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548316.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 221792 222841 . + . ID=gene-SO06_RS08575;Name=SO06_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08575 NZ_MYDG01000004.1 Protein Homology CDS 221792 222841 . + 0 ID=cds-WP_023232525.1;Parent=gene-SO06_RS08575;Dbxref=GenBank:WP_023232525.1;Name=WP_023232525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=SO06_RS08575;product=YeiH family protein;protein_id=WP_023232525.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 222920 223777 . + . ID=gene-SO06_RS08580;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=SO06_RS08580 NZ_MYDG01000004.1 Protein Homology CDS 222920 223777 . + 0 ID=cds-WP_023232526.1;Parent=gene-SO06_RS08580;Dbxref=GenBank:WP_023232526.1;Name=WP_023232526.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=SO06_RS08580;product=deoxyribonuclease IV;protein_id=WP_023232526.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 223842 225530 . - . ID=gene-SO06_RS08585;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=SO06_RS08585 NZ_MYDG01000004.1 Protein Homology CDS 223842 225530 . - 0 ID=cds-WP_023232527.1;Parent=gene-SO06_RS08585;Dbxref=GenBank:WP_023232527.1;Name=WP_023232527.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=SO06_RS08585;product=PTS fructose transporter subunit IIBC;protein_id=WP_023232527.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 225547 226485 . - . ID=gene-SO06_RS08590;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=SO06_RS08590 NZ_MYDG01000004.1 Protein Homology CDS 225547 226485 . - 0 ID=cds-WP_000091249.1;Parent=gene-SO06_RS08590;Dbxref=GenBank:WP_000091249.1;Name=WP_000091249.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=SO06_RS08590;product=1-phosphofructokinase;protein_id=WP_000091249.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 226485 227615 . - . ID=gene-SO06_RS08595;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=SO06_RS08595 NZ_MYDG01000004.1 Protein Homology CDS 226485 227615 . - 0 ID=cds-WP_000487287.1;Parent=gene-SO06_RS08595;Dbxref=GenBank:WP_000487287.1;Name=WP_000487287.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=SO06_RS08595;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487287.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 227985 229166 . + . ID=gene-SO06_RS08600;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=SO06_RS08600 NZ_MYDG01000004.1 Protein Homology CDS 227985 229166 . + 0 ID=cds-WP_000551926.1;Parent=gene-SO06_RS08600;Dbxref=GenBank:WP_000551926.1;Name=WP_000551926.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=SO06_RS08600;product=sugar efflux transporter SetB;protein_id=WP_000551926.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 229231 229896 . - . ID=gene-SO06_RS08605;Name=SO06_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08605 NZ_MYDG01000004.1 Protein Homology CDS 229231 229896 . - 0 ID=cds-WP_023231328.1;Parent=gene-SO06_RS08605;Dbxref=GenBank:WP_023231328.1;Name=WP_023231328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=SO06_RS08605;product=GNVR domain-containing protein;protein_id=WP_023231328.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 229898 230020 . - . ID=gene-SO06_RS08610;Name=SO06_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08610 NZ_MYDG01000004.1 Protein Homology CDS 229898 230020 . - 0 ID=cds-WP_001519564.1;Parent=gene-SO06_RS08610;Dbxref=GenBank:WP_001519564.1;Name=WP_001519564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=SO06_RS08610;product=membrane protein;protein_id=WP_001519564.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 230408 230662 . - . ID=gene-SO06_RS08615;Name=SO06_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08615 NZ_MYDG01000004.1 Protein Homology CDS 230408 230662 . - 0 ID=cds-WP_001523448.1;Parent=gene-SO06_RS08615;Dbxref=GenBank:WP_001523448.1;Name=WP_001523448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=SO06_RS08615;product=YkgJ family cysteine cluster protein;protein_id=WP_001523448.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 230986 231558 . + . ID=gene-SO06_RS08620;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=SO06_RS08620 NZ_MYDG01000004.1 Protein Homology CDS 230986 231558 . + 0 ID=cds-WP_001136822.1;Parent=gene-SO06_RS08620;Dbxref=GenBank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=SO06_RS08620;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 231771 232757 . + . ID=gene-SO06_RS08625;Name=SO06_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08625 NZ_MYDG01000004.1 Protein Homology CDS 231771 232757 . + 0 ID=cds-WP_023231329.1;Parent=gene-SO06_RS08625;Dbxref=GenBank:WP_023231329.1;Name=WP_023231329.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=SO06_RS08625;product=CobW family GTP-binding protein;protein_id=WP_023231329.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 232787 233506 . + . ID=gene-SO06_RS08630;Name=SO06_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08630 NZ_MYDG01000004.1 Protein Homology CDS 232787 233506 . + 0 ID=cds-WP_000178091.1;Parent=gene-SO06_RS08630;Dbxref=GenBank:WP_000178091.1;Name=WP_000178091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=SO06_RS08630;product=phosphatase PAP2 family protein;protein_id=WP_000178091.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 233920 234492 . + . ID=gene-SO06_RS08640;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=SO06_RS08640 NZ_MYDG01000004.1 Protein Homology CDS 233920 234492 . + 0 ID=cds-WP_000241015.1;Parent=gene-SO06_RS08640;Dbxref=GenBank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=SO06_RS08640;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 234818 236374 . + . ID=gene-SO06_RS08650;Name=SO06_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08650 NZ_MYDG01000004.1 Protein Homology CDS 234818 236374 . + 0 ID=cds-WP_000957746.1;Parent=gene-SO06_RS08650;Dbxref=GenBank:WP_000957746.1;Name=WP_000957746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=SO06_RS08650;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000957746.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 236481 238286 . + . ID=gene-SO06_RS08655;Name=SO06_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08655 NZ_MYDG01000004.1 Protein Homology CDS 236481 238286 . + 0 ID=cds-WP_000561742.1;Parent=gene-SO06_RS08655;Dbxref=GenBank:WP_000561742.1;Name=WP_000561742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=SO06_RS08655;product=extracellular solute-binding protein;protein_id=WP_000561742.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 238296 239390 . + . ID=gene-SO06_RS08660;Name=SO06_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08660 NZ_MYDG01000004.1 Protein Homology CDS 238296 239390 . + 0 ID=cds-WP_000501623.1;Parent=gene-SO06_RS08660;Dbxref=GenBank:WP_000501623.1;Name=WP_000501623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=SO06_RS08660;product=microcin C ABC transporter permease YejB;protein_id=WP_000501623.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 239390 240415 . + . ID=gene-SO06_RS08665;Name=SO06_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08665 NZ_MYDG01000004.1 Protein Homology CDS 239390 240415 . + 0 ID=cds-WP_001137761.1;Parent=gene-SO06_RS08665;Dbxref=GenBank:WP_001137761.1;Name=WP_001137761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=SO06_RS08665;product=ABC transporter permease;protein_id=WP_001137761.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 240417 242006 . + . ID=gene-SO06_RS08670;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=SO06_RS08670 NZ_MYDG01000004.1 Protein Homology CDS 240417 242006 . + 0 ID=cds-WP_000203612.1;Parent=gene-SO06_RS08670;Dbxref=GenBank:WP_000203612.1;Name=WP_000203612.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=SO06_RS08670;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_000203612.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 242010 242354 . - . ID=gene-SO06_RS08675;Name=SO06_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08675 NZ_MYDG01000004.1 Protein Homology CDS 242010 242354 . - 0 ID=cds-WP_001094639.1;Parent=gene-SO06_RS08675;Dbxref=GenBank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=SO06_RS08675;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 242745 243935 . - . ID=gene-SO06_RS08685;Name=SO06_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08685 NZ_MYDG01000004.1 Protein Homology CDS 242745 243935 . - 0 ID=cds-WP_080204195.1;Parent=gene-SO06_RS08685;Dbxref=GenBank:WP_080204195.1;Name=WP_080204195.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=SO06_RS08685;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_080204195.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 243963 244658 . - . ID=gene-SO06_RS08690;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=SO06_RS08690 NZ_MYDG01000004.1 Protein Homology CDS 243963 244658 . - 0 ID=cds-WP_001234836.1;Parent=gene-SO06_RS08690;Dbxref=GenBank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=SO06_RS08690;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 244810 246570 . + . ID=gene-SO06_RS08695;Name=SO06_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08695 NZ_MYDG01000004.1 Protein Homology CDS 244810 246570 . + 0 ID=cds-WP_080204196.1;Parent=gene-SO06_RS08695;Dbxref=GenBank:WP_080204196.1;Name=WP_080204196.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=SO06_RS08695;product=DEAD/DEAH box helicase;protein_id=WP_080204196.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 246695 246979 . + . ID=gene-SO06_RS08700;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=SO06_RS08700 NZ_MYDG01000004.1 Protein Homology CDS 246695 246979 . + 0 ID=cds-WP_000494192.1;Parent=gene-SO06_RS08700;Dbxref=GenBank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=SO06_RS08700;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 247087 247707 . - . ID=gene-SO06_RS08705;Name=SO06_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08705 NZ_MYDG01000004.1 Protein Homology CDS 247087 247707 . - 0 ID=cds-WP_000033440.1;Parent=gene-SO06_RS08705;Dbxref=GenBank:WP_000033440.1;Name=WP_000033440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=SO06_RS08705;product=hypothetical protein;protein_id=WP_000033440.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 247735 248742 . - . ID=gene-SO06_RS08710;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=SO06_RS08710 NZ_MYDG01000004.1 Protein Homology CDS 247735 248742 . - 0 ID=cds-WP_000050806.1;Parent=gene-SO06_RS08710;Dbxref=GenBank:WP_000050806.1;Name=WP_000050806.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=SO06_RS08710;product=nucleoid-associated protein YejK;protein_id=WP_000050806.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 248922 249149 . + . ID=gene-SO06_RS08715;Name=SO06_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08715 NZ_MYDG01000004.1 Protein Homology CDS 248922 249149 . + 0 ID=cds-WP_001135904.1;Parent=gene-SO06_RS08715;Dbxref=GenBank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=SO06_RS08715;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 249181 250941 . + . ID=gene-SO06_RS08720;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=SO06_RS08720 NZ_MYDG01000004.1 Protein Homology CDS 249181 250941 . + 0 ID=cds-WP_080204197.1;Parent=gene-SO06_RS08720;Dbxref=GenBank:WP_080204197.1;Name=WP_080204197.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=SO06_RS08720;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_080204197.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 251015 251091 . + . ID=gene-SO06_RS08725;Name=SO06_RS08725;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS08725 NZ_MYDG01000004.1 tRNAscan-SE tRNA 251015 251091 . + . ID=rna-SO06_RS08725;Parent=gene-SO06_RS08725;anticodon=(pos:251049..251051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS08725;product=tRNA-Pro NZ_MYDG01000004.1 tRNAscan-SE exon 251015 251091 . + . ID=exon-SO06_RS08725-1;Parent=rna-SO06_RS08725;anticodon=(pos:251049..251051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS08725;product=tRNA-Pro NZ_MYDG01000004.1 RefSeq pseudogene 251047 251139 . + . ID=gene-SO06_RS25515;Name=SO06_RS25515;end_range=251139,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25515;partial=true;pseudo=true NZ_MYDG01000004.1 Protein Homology CDS 251047 251139 . + 0 ID=cds-SO06_RS25515;Parent=gene-SO06_RS25515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=251139,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=SO06_RS25515;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 251133 251336 . + . ID=gene-SO06_RS08730;Name=SO06_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08730 NZ_MYDG01000004.1 Protein Homology CDS 251133 251336 . + 0 ID=cds-WP_023138354.1;Parent=gene-SO06_RS08730;Dbxref=GenBank:WP_023138354.1;Name=WP_023138354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=SO06_RS08730;product=DinI-like family protein;protein_id=WP_023138354.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 251529 252092 . - . ID=gene-SO06_RS08735;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=SO06_RS08735 NZ_MYDG01000004.1 Protein Homology CDS 251529 252092 . - 0 ID=cds-WP_080204198.1;Parent=gene-SO06_RS08735;Dbxref=GenBank:WP_080204198.1;Name=WP_080204198.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=SO06_RS08735;product=lipid A 3-O-deacylase PagL;protein_id=WP_080204198.1;transl_table=11 NZ_MYDG01000004.1 RefSeq gene 252821 253468 . + . ID=gene-SO06_RS08745;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=SO06_RS08745 NZ_MYDG01000004.1 Protein Homology CDS 252821 253468 . + 0 ID=cds-WP_001115500.1;Parent=gene-SO06_RS08745;Dbxref=GenBank:WP_001115500.1;Name=WP_001115500.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=SO06_RS08745;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115500.1;transl_table=11 ##sequence-region NZ_MYDG01000050.1 1 1478 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000050.1 RefSeq region 1 1478 . + . ID=NZ_MYDG01000050.1:1..1478;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000050.1 RefSeq gene 1 1478 . + . ID=gene-SO06_RS24715;Name=SO06_RS24715;end_range=1478,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24715;partial=true;start_range=.,1 NZ_MYDG01000050.1 Protein Homology CDS 1 1478 . + 2 ID=cds-WP_139771327.1;Parent=gene-SO06_RS24715;Dbxref=GenBank:WP_139771327.1;Name=WP_139771327.1;Ontology_term=GO:0016491,GO:0046872;end_range=1478,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=SO06_RS24715;partial=true;product=iron-containing alcohol dehydrogenase;protein_id=WP_139771327.1;start_range=.,1;transl_table=11 ##sequence-region NZ_MYDG01000051.1 1 1043 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000051.1 RefSeq region 1 1043 . + . ID=NZ_MYDG01000051.1:1..1043;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000051.1 RefSeq gene 1 1043 . - . ID=gene-SO06_RS24720;Name=tuf;end_range=1043,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=SO06_RS24720;partial=true;start_range=.,1 NZ_MYDG01000051.1 Protein Homology CDS 1 1043 . - 0 ID=cds-WP_016740776.1;Parent=gene-SO06_RS24720;Dbxref=GenBank:WP_016740776.1;Name=WP_016740776.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=1043,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=SO06_RS24720;partial=true;product=elongation factor Tu;protein_id=WP_016740776.1;start_range=.,1;transl_table=11 ##sequence-region NZ_MYDG01000052.1 1 1031 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000052.1 RefSeq region 1 1031 . + . ID=NZ_MYDG01000052.1:1..1031;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000052.1 RefSeq gene 1 1031 . + . ID=gene-SO06_RS24725;Name=SO06_RS24725;end_range=1031,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24725;partial=true;start_range=.,1 NZ_MYDG01000052.1 Protein Homology CDS 1 1031 . + 0 ID=cds-WP_139771332.1;Parent=gene-SO06_RS24725;Dbxref=GenBank:WP_139771332.1;Name=WP_139771332.1;end_range=1031,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=SO06_RS24725;partial=true;product=Ig-like domain-containing protein;protein_id=WP_139771332.1;start_range=.,1;transl_table=11 ##sequence-region NZ_MYDG01000053.1 1 995 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000053.1 RefSeq region 1 995 . + . ID=NZ_MYDG01000053.1:1..995;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000053.1 RefSeq gene 1 733 . - . ID=gene-SO06_RS24730;Name=SO06_RS24730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24730;partial=true;start_range=.,1 NZ_MYDG01000053.1 Protein Homology CDS 1 733 . - 0 ID=cds-WP_139783750.1;Parent=gene-SO06_RS24730;Dbxref=GenBank:WP_139783750.1;Name=WP_139783750.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=SO06_RS24730;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_139783750.1;start_range=.,1;transl_table=11 NZ_MYDG01000053.1 RefSeq gene 746 995 . - . ID=gene-SO06_RS24735;Name=SO06_RS24735;end_range=995,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24735;partial=true NZ_MYDG01000053.1 Protein Homology CDS 746 995 . - 1 ID=cds-WP_080204296.1;Parent=gene-SO06_RS24735;Dbxref=GenBank:WP_080204296.1;Name=WP_080204296.1;end_range=995,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=SO06_RS24735;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_080204296.1;transl_table=11 ##sequence-region NZ_MYDG01000054.1 1 820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000054.1 RefSeq region 1 820 . + . ID=NZ_MYDG01000054.1:1..820;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000054.1 RefSeq gene 64 768 . + . ID=gene-SO06_RS24740;Name=SO06_RS24740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24740 NZ_MYDG01000054.1 Protein Homology CDS 64 768 . + 0 ID=cds-WP_001067855.1;Parent=gene-SO06_RS24740;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=SO06_RS24740;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 ##sequence-region NZ_MYDG01000055.1 1 690 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000055.1 RefSeq region 1 690 . + . ID=NZ_MYDG01000055.1:1..690;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000055.1 RefSeq gene 1 690 . + . ID=gene-SO06_RS24745;Name=SO06_RS24745;end_range=690,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24745;partial=true;start_range=.,1 NZ_MYDG01000055.1 Protein Homology CDS 1 690 . + 2 ID=cds-WP_139783751.1;Parent=gene-SO06_RS24745;Dbxref=GenBank:WP_139783751.1;Name=WP_139783751.1;Ontology_term=GO:0006814,GO:0016829;end_range=690,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=SO06_RS24745;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_139783751.1;start_range=.,1;transl_table=11 ##sequence-region NZ_MYDG01000056.1 1 662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000056.1 RefSeq region 1 662 . + . ID=NZ_MYDG01000056.1:1..662;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000056.1 RefSeq gene 123 662 . + . ID=gene-SO06_RS24750;Name=SO06_RS24750;end_range=662,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=SO06_RS24750;partial=true NZ_MYDG01000056.1 cmsearch rRNA 123 662 . + . ID=rna-SO06_RS24750;Parent=gene-SO06_RS24750;Dbxref=RFAM:RF02541;end_range=662,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24750;partial=true;product=23S ribosomal RNA NZ_MYDG01000056.1 cmsearch exon 123 662 . + . ID=exon-SO06_RS24750-1;Parent=rna-SO06_RS24750;Dbxref=RFAM:RF02541;end_range=662,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24750;partial=true;product=23S ribosomal RNA ##sequence-region NZ_MYDG01000057.1 1 655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000057.1 RefSeq region 1 655 . + . ID=NZ_MYDG01000057.1:1..655;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000057.1 RefSeq gene 88 546 . + . ID=gene-SO06_RS24755;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=SO06_RS24755 NZ_MYDG01000057.1 Protein Homology CDS 88 546 . + 0 ID=cds-WP_000502119.1;Parent=gene-SO06_RS24755;Dbxref=GenBank:WP_000502119.1;Name=WP_000502119.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=SO06_RS24755;product=IS200/IS605-like element IS200F family transposase;protein_id=WP_000502119.1;transl_table=11 ##sequence-region NZ_MYDG01000058.1 1 617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000058.1 RefSeq region 1 617 . + . ID=NZ_MYDG01000058.1:1..617;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000058.1 RefSeq gene 1 617 . - . ID=gene-SO06_RS24765;Name=SO06_RS24765;end_range=617,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=SO06_RS24765;partial=true;start_range=.,1 NZ_MYDG01000058.1 cmsearch rRNA 1 617 . - . ID=rna-SO06_RS24765;Parent=gene-SO06_RS24765;Dbxref=RFAM:RF02541;end_range=617,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24765;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_MYDG01000058.1 cmsearch exon 1 617 . - . ID=exon-SO06_RS24765-1;Parent=rna-SO06_RS24765;Dbxref=RFAM:RF02541;end_range=617,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24765;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_MYDG01000059.1 1 481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000059.1 RefSeq region 1 481 . + . ID=NZ_MYDG01000059.1:1..481;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000059.1 RefSeq gene 93 169 . + . ID=gene-SO06_RS24770;Name=SO06_RS24770;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24770 NZ_MYDG01000059.1 tRNAscan-SE tRNA 93 169 . + . ID=rna-SO06_RS24770;Parent=gene-SO06_RS24770;anticodon=(pos:127..129);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24770;product=tRNA-Ile NZ_MYDG01000059.1 tRNAscan-SE exon 93 169 . + . ID=exon-SO06_RS24770-1;Parent=rna-SO06_RS24770;anticodon=(pos:127..129);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24770;product=tRNA-Ile NZ_MYDG01000059.1 RefSeq gene 279 354 . + . ID=gene-SO06_RS24775;Name=SO06_RS24775;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24775 NZ_MYDG01000059.1 tRNAscan-SE tRNA 279 354 . + . ID=rna-SO06_RS24775;Parent=gene-SO06_RS24775;anticodon=(pos:312..314);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24775;product=tRNA-Ala NZ_MYDG01000059.1 tRNAscan-SE exon 279 354 . + . ID=exon-SO06_RS24775-1;Parent=rna-SO06_RS24775;anticodon=(pos:312..314);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24775;product=tRNA-Ala ##sequence-region NZ_MYDG01000005.1 1 247537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000005.1 RefSeq region 1 247537 . + . ID=NZ_MYDG01000005.1:1..247537;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000005.1 RefSeq pseudogene 1 911 . - . ID=gene-SO06_RS08750;Name=sspH3;gbkey=Gene;gene=sspH3;gene_biotype=pseudogene;locus_tag=SO06_RS08750;partial=true;pseudo=true;start_range=.,1 NZ_MYDG01000005.1 Protein Homology CDS 1 911 . - 0 ID=cds-SO06_RS08750;Parent=gene-SO06_RS08750;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=sspH3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117491.1;locus_tag=SO06_RS08750;partial=true;product=type III secretion system effector SspH3;pseudo=true;start_range=.,1;transl_table=11 NZ_MYDG01000005.1 RefSeq pseudogene 1173 1525 . + . ID=gene-SO06_RS08760;Name=SO06_RS08760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS08760;partial=true;pseudo=true;start_range=.,1173 NZ_MYDG01000005.1 Protein Homology CDS 1173 1525 . + 0 ID=cds-SO06_RS08760;Parent=gene-SO06_RS08760;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=SO06_RS08760;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,1173;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 1899 2252 . - . ID=gene-SO06_RS08770;Name=SO06_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08770 NZ_MYDG01000005.1 Protein Homology CDS 1899 2252 . - 0 ID=cds-WP_000722368.1;Parent=gene-SO06_RS08770;Dbxref=GenBank:WP_000722368.1;Name=WP_000722368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=SO06_RS08770;product=YebY family protein;protein_id=WP_000722368.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 2269 3144 . - . ID=gene-SO06_RS08775;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=SO06_RS08775 NZ_MYDG01000005.1 Protein Homology CDS 2269 3144 . - 0 ID=cds-WP_072103686.1;Parent=gene-SO06_RS08775;Dbxref=GenBank:WP_072103686.1;Name=WP_072103686.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=SO06_RS08775;product=copper homeostasis membrane protein CopD;protein_id=WP_072103686.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 3145 3519 . - . ID=gene-SO06_RS08780;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=SO06_RS08780 NZ_MYDG01000005.1 Protein Homology CDS 3145 3519 . - 0 ID=cds-WP_000168393.1;Parent=gene-SO06_RS08780;Dbxref=GenBank:WP_000168393.1;Name=WP_000168393.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=SO06_RS08780;product=CopC domain-containing protein YobA;protein_id=WP_000168393.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 3657 3887 . + . ID=gene-SO06_RS08785;Name=SO06_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08785 NZ_MYDG01000005.1 Protein Homology CDS 3657 3887 . + 0 ID=cds-WP_000856224.1;Parent=gene-SO06_RS08785;Dbxref=GenBank:WP_000856224.1;Name=WP_000856224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=SO06_RS08785;product=DNA polymerase III subunit theta;protein_id=WP_000856224.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 3995 4651 . + . ID=gene-SO06_RS08790;Name=SO06_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08790 NZ_MYDG01000005.1 Protein Homology CDS 3995 4651 . + 0 ID=cds-WP_000100249.1;Parent=gene-SO06_RS08790;Dbxref=GenBank:WP_000100249.1;Name=WP_000100249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=SO06_RS08790;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000100249.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 4675 5373 . + . ID=gene-SO06_RS08795;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=SO06_RS08795 NZ_MYDG01000005.1 Protein Homology CDS 4675 5373 . + 0 ID=cds-WP_000944278.1;Parent=gene-SO06_RS08795;Dbxref=GenBank:WP_000944278.1;Name=WP_000944278.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=SO06_RS08795;product=exodeoxyribonuclease X;protein_id=WP_000944278.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 5408 7459 . - . ID=gene-SO06_RS08800;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=SO06_RS08800 NZ_MYDG01000005.1 Protein Homology CDS 5408 7459 . - 0 ID=cds-WP_048348801.1;Parent=gene-SO06_RS08800;Dbxref=GenBank:WP_048348801.1;Name=WP_048348801.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=SO06_RS08800;product=oligopeptidase B;protein_id=WP_048348801.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 7672 8331 . - . ID=gene-SO06_RS08805;Name=SO06_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08805 NZ_MYDG01000005.1 Protein Homology CDS 7672 8331 . - 0 ID=cds-WP_000024706.1;Parent=gene-SO06_RS08805;Dbxref=GenBank:WP_000024706.1;Name=WP_000024706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=SO06_RS08805;product=tellurite resistance TerB family protein;protein_id=WP_000024706.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 8425 8778 . - . ID=gene-SO06_RS08810;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=SO06_RS08810 NZ_MYDG01000005.1 Protein Homology CDS 8425 8778 . - 0 ID=cds-WP_001042123.1;Parent=gene-SO06_RS08810;Dbxref=GenBank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=SO06_RS08810;product=protein YebF;protein_id=WP_001042123.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 8846 9136 . - . ID=gene-SO06_RS08815;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=SO06_RS08815 NZ_MYDG01000005.1 Protein Homology CDS 8846 9136 . - 0 ID=cds-WP_000257723.1;Parent=gene-SO06_RS08815;Dbxref=GenBank:WP_000257723.1;Name=WP_000257723.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=SO06_RS08815;product=DNA damage-inducible protein YebG;protein_id=WP_000257723.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 9267 10445 . + . ID=gene-SO06_RS08820;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=SO06_RS08820 NZ_MYDG01000005.1 Protein Homology CDS 9267 10445 . + 0 ID=cds-WP_023232544.1;Parent=gene-SO06_RS08820;Dbxref=GenBank:WP_023232544.1;Name=WP_023232544.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=SO06_RS08820;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_023232544.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 10545 11186 . - . ID=gene-SO06_RS08825;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=SO06_RS08825 NZ_MYDG01000005.1 Protein Homology CDS 10545 11186 . - 0 ID=cds-WP_000800494.1;Parent=gene-SO06_RS08825;Dbxref=GenBank:WP_000800494.1;Name=WP_000800494.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=SO06_RS08825;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800494.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 11224 13035 . - . ID=gene-SO06_RS08830;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=SO06_RS08830 NZ_MYDG01000005.1 Protein Homology CDS 11224 13035 . - 0 ID=cds-WP_001069124.1;Parent=gene-SO06_RS08830;Dbxref=GenBank:WP_001069124.1;Name=WP_001069124.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=SO06_RS08830;product=phosphogluconate dehydratase;protein_id=WP_001069124.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 13270 14745 . - . ID=gene-SO06_RS08835;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=SO06_RS08835 NZ_MYDG01000005.1 Protein Homology CDS 13270 14745 . - 0 ID=cds-WP_000301711.1;Parent=gene-SO06_RS08835;Dbxref=GenBank:WP_000301711.1;Name=WP_000301711.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=SO06_RS08835;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301711.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 15087 15956 . + . ID=gene-SO06_RS08845;Name=SO06_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08845 NZ_MYDG01000005.1 Protein Homology CDS 15087 15956 . + 0 ID=cds-WP_001056719.1;Parent=gene-SO06_RS08845;Dbxref=GenBank:WP_001056719.1;Name=WP_001056719.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=SO06_RS08845;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001056719.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 16080 17522 . + . ID=gene-SO06_RS08850;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=SO06_RS08850 NZ_MYDG01000005.1 Protein Homology CDS 16080 17522 . + 0 ID=cds-WP_000091156.1;Parent=gene-SO06_RS08850;Dbxref=GenBank:WP_000091156.1;Name=WP_000091156.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=SO06_RS08850;product=pyruvate kinase;protein_id=WP_000091156.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 17595 18566 . - . ID=gene-SO06_RS08855;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=SO06_RS08855 NZ_MYDG01000005.1 Protein Homology CDS 17595 18566 . - 0 ID=cds-WP_000448401.1;Parent=gene-SO06_RS08855;Dbxref=GenBank:WP_000448401.1;Name=WP_000448401.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=SO06_RS08855;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448401.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 18683 20002 . - . ID=gene-SO06_RS08865;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=SO06_RS08865 NZ_MYDG01000005.1 Protein Homology CDS 18683 20002 . - 0 ID=cds-WP_001184028.1;Parent=gene-SO06_RS08865;Dbxref=GenBank:WP_001184028.1;Name=WP_001184028.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=SO06_RS08865;product=murein DD-endopeptidase MepM;protein_id=WP_001184028.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 20018 20962 . - . ID=gene-SO06_RS08870;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=SO06_RS08870 NZ_MYDG01000005.1 Protein Homology CDS 20018 20962 . - 0 ID=cds-WP_000939597.1;Parent=gene-SO06_RS08870;Dbxref=GenBank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=SO06_RS08870;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 21041 21796 . + . ID=gene-SO06_RS08875;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=SO06_RS08875 NZ_MYDG01000005.1 Protein Homology CDS 21041 21796 . + 0 ID=cds-WP_000203023.1;Parent=gene-SO06_RS08875;Dbxref=GenBank:WP_000203023.1;Name=WP_000203023.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=SO06_RS08875;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000203023.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 21793 22578 . + . ID=gene-SO06_RS08880;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=SO06_RS08880 NZ_MYDG01000005.1 Protein Homology CDS 21793 22578 . + 0 ID=cds-WP_000571508.1;Parent=gene-SO06_RS08880;Dbxref=GenBank:WP_000571508.1;Name=WP_000571508.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=SO06_RS08880;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571508.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 22657 23667 . - . ID=gene-SO06_RS08885;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=SO06_RS08885 NZ_MYDG01000005.1 Protein Homology CDS 22657 23667 . - 0 ID=cds-WP_000568504.1;Parent=gene-SO06_RS08885;Dbxref=GenBank:WP_000568504.1;Name=WP_000568504.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=SO06_RS08885;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568504.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 23676 24287 . - . ID=gene-SO06_RS08890;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=SO06_RS08890 NZ_MYDG01000005.1 Protein Homology CDS 23676 24287 . - 0 ID=cds-WP_000580335.1;Parent=gene-SO06_RS08890;Dbxref=GenBank:WP_000580335.1;Name=WP_000580335.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=SO06_RS08890;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580335.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 24707 25603 . + . ID=gene-SO06_RS08895;Name=SO06_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08895 NZ_MYDG01000005.1 Protein Homology CDS 24707 25603 . + 0 ID=cds-WP_010989032.1;Parent=gene-SO06_RS08895;Dbxref=GenBank:WP_010989032.1;Name=WP_010989032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460853.1;locus_tag=SO06_RS08895;product=DUF4034 domain-containing protein;protein_id=WP_010989032.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 26230 26829 . + . ID=gene-SO06_RS08905;Name=SO06_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08905 NZ_MYDG01000005.1 Protein Homology CDS 26230 26829 . + 0 ID=cds-WP_023232095.1;Parent=gene-SO06_RS08905;Dbxref=GenBank:WP_023232095.1;Name=WP_023232095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=SO06_RS08905;product=YebB family permuted papain-like enzyme;protein_id=WP_023232095.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 26831 27352 . - . ID=gene-SO06_RS08910;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=SO06_RS08910 NZ_MYDG01000005.1 Protein Homology CDS 26831 27352 . - 0 ID=cds-WP_000022509.1;Parent=gene-SO06_RS08910;Dbxref=GenBank:WP_000022509.1;Name=WP_000022509.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=SO06_RS08910;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_000022509.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 27389 28129 . - . ID=gene-SO06_RS08915;Name=SO06_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08915 NZ_MYDG01000005.1 Protein Homology CDS 27389 28129 . - 0 ID=cds-WP_000907242.1;Parent=gene-SO06_RS08915;Dbxref=GenBank:WP_000907242.1;Name=WP_000907242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=SO06_RS08915;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907242.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 28159 28611 . - . ID=gene-SO06_RS08920;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=SO06_RS08920 NZ_MYDG01000005.1 Protein Homology CDS 28159 28611 . - 0 ID=cds-WP_000653693.1;Parent=gene-SO06_RS08920;Dbxref=GenBank:WP_000653693.1;Name=WP_000653693.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=SO06_RS08920;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653693.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 28714 30486 . - . ID=gene-SO06_RS08925;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=SO06_RS08925 NZ_MYDG01000005.1 Protein Homology CDS 28714 30486 . - 0 ID=cds-WP_023232094.1;Parent=gene-SO06_RS08925;Dbxref=GenBank:WP_023232094.1;Name=WP_023232094.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=SO06_RS08925;product=aspartate--tRNA ligase;protein_id=WP_023232094.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 30811 31377 . + . ID=gene-SO06_RS08930;Name=SO06_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08930 NZ_MYDG01000005.1 Protein Homology CDS 30811 31377 . + 0 ID=cds-WP_000916144.1;Parent=gene-SO06_RS08930;Dbxref=GenBank:WP_000916144.1;Name=WP_000916144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=SO06_RS08930;product=hydrolase;protein_id=WP_000916144.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 31374 32192 . + . ID=gene-SO06_RS08935;Name=SO06_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08935 NZ_MYDG01000005.1 Protein Homology CDS 31374 32192 . + 0 ID=cds-WP_000639226.1;Parent=gene-SO06_RS08935;Dbxref=GenBank:WP_000639226.1;Name=WP_000639226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=SO06_RS08935;product=DUF72 domain-containing protein;protein_id=WP_000639226.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 32245 32640 . + . ID=gene-SO06_RS08940;Name=SO06_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08940 NZ_MYDG01000005.1 Protein Homology CDS 32245 32640 . + 0 ID=cds-WP_000252975.1;Parent=gene-SO06_RS08940;Dbxref=GenBank:WP_000252975.1;Name=WP_000252975.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=SO06_RS08940;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 32681 33424 . + . ID=gene-SO06_RS08945;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=SO06_RS08945 NZ_MYDG01000005.1 Protein Homology CDS 32681 33424 . + 0 ID=cds-WP_000019607.1;Parent=gene-SO06_RS08945;Dbxref=GenBank:WP_000019607.1;Name=WP_000019607.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=SO06_RS08945;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019607.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 33421 34392 . + . ID=gene-SO06_RS08950;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=SO06_RS08950 NZ_MYDG01000005.1 Protein Homology CDS 33421 34392 . + 0 ID=cds-WP_031605237.1;Parent=gene-SO06_RS08950;Dbxref=GenBank:WP_031605237.1;Name=WP_031605237.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=SO06_RS08950;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_031605237.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 34628 35374 . - . ID=gene-SO06_RS08960;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=SO06_RS08960 NZ_MYDG01000005.1 Protein Homology CDS 34628 35374 . - 0 ID=cds-WP_001185779.1;Parent=gene-SO06_RS08960;Dbxref=GenBank:WP_001185779.1;Name=WP_001185779.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=SO06_RS08960;product=copper homeostasis protein CutC;protein_id=WP_001185779.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 35394 35963 . - . ID=gene-SO06_RS08965;Name=SO06_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS08965 NZ_MYDG01000005.1 Protein Homology CDS 35394 35963 . - 0 ID=cds-WP_000024794.1;Parent=gene-SO06_RS08965;Dbxref=GenBank:WP_000024794.1;Name=WP_000024794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=SO06_RS08965;product=VOC family protein;protein_id=WP_000024794.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 36200 37933 . + . ID=gene-SO06_RS08970;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=SO06_RS08970 NZ_MYDG01000005.1 Protein Homology CDS 36200 37933 . + 0 ID=cds-WP_001025365.1;Parent=gene-SO06_RS08970;Dbxref=GenBank:WP_001025365.1;Name=WP_001025365.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=SO06_RS08970;product=arginine--tRNA ligase;protein_id=WP_001025365.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 38122 39993 . + . ID=gene-SO06_RS08975;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=SO06_RS08975 NZ_MYDG01000005.1 Protein Homology CDS 38122 39993 . + 0 ID=cds-WP_023200532.1;Parent=gene-SO06_RS08975;Dbxref=GenBank:WP_023200532.1;Name=WP_023200532.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=SO06_RS08975;product=penicillin-binding protein 2;protein_id=WP_023200532.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 40047 41186 . - . ID=gene-SO06_RS08980;Name=bglB;gbkey=Gene;gene=bglB;gene_biotype=protein_coding;locus_tag=SO06_RS08980 NZ_MYDG01000005.1 Protein Homology CDS 40047 41186 . - 0 ID=cds-WP_000989908.1;Parent=gene-SO06_RS08980;Dbxref=GenBank:WP_000989908.1;Name=WP_000989908.1;Ontology_term=GO:0009313,GO:0004556;gbkey=CDS;gene=bglB;go_function=alpha-amylase activity|0004556||IEA;go_process=oligosaccharide catabolic process|0009313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=SO06_RS08980;product=beta-galactosidase BglB;protein_id=WP_000989908.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 41423 41815 . - . ID=gene-SO06_RS08985;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=SO06_RS08985 NZ_MYDG01000005.1 Protein Homology CDS 41423 41815 . - 0 ID=cds-WP_001233619.1;Parent=gene-SO06_RS08985;Dbxref=GenBank:WP_001233619.1;Name=WP_001233619.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=SO06_RS08985;product=flagellar protein FlhE;protein_id=WP_001233619.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 41815 43893 . - . ID=gene-SO06_RS08990;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=SO06_RS08990 NZ_MYDG01000005.1 Protein Homology CDS 41815 43893 . - 0 ID=cds-WP_000002392.1;Parent=gene-SO06_RS08990;Dbxref=GenBank:WP_000002392.1;Name=WP_000002392.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=SO06_RS08990;product=flagellar biosynthesis protein FlhA;protein_id=WP_000002392.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 43886 45037 . - . ID=gene-SO06_RS08995;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=SO06_RS08995 NZ_MYDG01000005.1 Protein Homology CDS 43886 45037 . - 0 ID=cds-WP_000797089.1;Parent=gene-SO06_RS08995;Dbxref=GenBank:WP_000797089.1;Name=WP_000797089.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=SO06_RS08995;product=flagellar biosynthesis protein FlhB;protein_id=WP_000797089.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 45231 45875 . - . ID=gene-SO06_RS09000;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=SO06_RS09000 NZ_MYDG01000005.1 Protein Homology CDS 45231 45875 . - 0 ID=cds-WP_000983585.1;Parent=gene-SO06_RS09000;Dbxref=GenBank:WP_000983585.1;Name=WP_000983585.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=SO06_RS09000;product=protein phosphatase CheZ;protein_id=WP_000983585.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 45886 46275 . - . ID=gene-SO06_RS09005;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=SO06_RS09005 NZ_MYDG01000005.1 Protein Homology CDS 45886 46275 . - 0 ID=cds-WP_000763861.1;Parent=gene-SO06_RS09005;Dbxref=GenBank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=SO06_RS09005;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 46293 47342 . - . ID=gene-SO06_RS09010;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=SO06_RS09010 NZ_MYDG01000005.1 Protein Homology CDS 46293 47342 . - 0 ID=cds-WP_000036392.1;Parent=gene-SO06_RS09010;Dbxref=GenBank:WP_000036392.1;Name=WP_000036392.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=SO06_RS09010;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036392.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 47339 48205 . - . ID=gene-SO06_RS09015;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=SO06_RS09015 NZ_MYDG01000005.1 Protein Homology CDS 47339 48205 . - 0 ID=cds-WP_000204363.1;Parent=gene-SO06_RS09015;Dbxref=GenBank:WP_000204363.1;Name=WP_000204363.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=SO06_RS09015;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204363.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 48366 50027 . - . ID=gene-SO06_RS09020;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=SO06_RS09020 NZ_MYDG01000005.1 Protein Homology CDS 48366 50027 . - 0 ID=cds-WP_080092508.1;Parent=gene-SO06_RS09020;Dbxref=GenBank:WP_080092508.1;Name=WP_080092508.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=SO06_RS09020;product=methyl-accepting chemotaxis protein II;protein_id=WP_080092508.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 50125 50277 . + . ID=gene-SO06_RS25260;Name=SO06_RS25260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25260 NZ_MYDG01000005.1 GeneMarkS-2+ CDS 50125 50277 . + 0 ID=cds-WP_176208153.1;Parent=gene-SO06_RS25260;Dbxref=GenBank:WP_176208153.1;Name=WP_176208153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS25260;product=hypothetical protein;protein_id=WP_176208153.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 50263 50766 . - . ID=gene-SO06_RS09025;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=SO06_RS09025 NZ_MYDG01000005.1 Protein Homology CDS 50263 50766 . - 0 ID=cds-WP_000147295.1;Parent=gene-SO06_RS09025;Dbxref=GenBank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=SO06_RS09025;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 50787 52802 . - . ID=gene-SO06_RS09030;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=SO06_RS09030 NZ_MYDG01000005.1 Protein Homology CDS 50787 52802 . - 0 ID=cds-WP_072103228.1;Parent=gene-SO06_RS09030;Dbxref=GenBank:WP_072103228.1;Name=WP_072103228.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=SO06_RS09030;product=chemotaxis protein CheA;protein_id=WP_072103228.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 52807 53736 . - . ID=gene-SO06_RS09035;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=SO06_RS09035 NZ_MYDG01000005.1 Protein Homology CDS 52807 53736 . - 0 ID=cds-WP_000795653.1;Parent=gene-SO06_RS09035;Dbxref=GenBank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=SO06_RS09035;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 53733 54620 . - . ID=gene-SO06_RS09040;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=SO06_RS09040 NZ_MYDG01000005.1 Protein Homology CDS 53733 54620 . - 0 ID=cds-WP_000906312.1;Parent=gene-SO06_RS09040;Dbxref=GenBank:WP_000906312.1;Name=WP_000906312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=SO06_RS09040;product=flagellar motor stator protein MotA;protein_id=WP_000906312.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 54745 55329 . - . ID=gene-SO06_RS09045;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=SO06_RS09045 NZ_MYDG01000005.1 Protein Homology CDS 54745 55329 . - 0 ID=cds-WP_000605987.1;Parent=gene-SO06_RS09045;Dbxref=GenBank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=SO06_RS09045;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 55326 55667 . - . ID=gene-SO06_RS09050;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=SO06_RS09050 NZ_MYDG01000005.1 Protein Homology CDS 55326 55667 . - 0 ID=cds-WP_001518146.1;Parent=gene-SO06_RS09050;Dbxref=GenBank:WP_001518146.1;Name=WP_001518146.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=SO06_RS09050;product=flagellar transcriptional regulator FlhD;protein_id=WP_001518146.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 56350 56466 . + . ID=gene-SO06_RS09055;Name=SO06_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09055 NZ_MYDG01000005.1 Protein Homology CDS 56350 56466 . + 0 ID=cds-WP_080204201.1;Parent=gene-SO06_RS09055;Dbxref=GenBank:WP_080204201.1;Name=WP_080204201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=SO06_RS09055;product=hypothetical protein;protein_id=WP_080204201.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 56463 56891 . + . ID=gene-SO06_RS09060;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=SO06_RS09060 NZ_MYDG01000005.1 Protein Homology CDS 56463 56891 . + 0 ID=cds-WP_000122606.1;Parent=gene-SO06_RS09060;Dbxref=GenBank:WP_000122606.1;Name=WP_000122606.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=SO06_RS09060;product=universal stress protein UspC;protein_id=WP_000122606.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 56909 58330 . - . ID=gene-SO06_RS09065;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=SO06_RS09065 NZ_MYDG01000005.1 Protein Homology CDS 56909 58330 . - 0 ID=cds-WP_079973243.1;Parent=gene-SO06_RS09065;Dbxref=GenBank:WP_079973243.1;Name=WP_079973243.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=SO06_RS09065;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_079973243.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 58305 59108 . - . ID=gene-SO06_RS09070;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=SO06_RS09070 NZ_MYDG01000005.1 Protein Homology CDS 58305 59108 . - 0 ID=cds-WP_000840114.1;Parent=gene-SO06_RS09070;Dbxref=GenBank:WP_000840114.1;Name=WP_000840114.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=SO06_RS09070;product=trehalose-phosphatase;protein_id=WP_000840114.1;transl_table=11 NZ_MYDG01000005.1 RefSeq pseudogene 59331 59511 . - . ID=gene-SO06_RS09075;Name=araH;end_range=59511,.;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=SO06_RS09075;partial=true;pseudo=true NZ_MYDG01000005.1 Protein Homology CDS 59331 59511 . - 0 ID=cds-SO06_RS09075;Parent=gene-SO06_RS09075;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=59511,.;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=SO06_RS09075;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 59623 60180 . - . ID=gene-SO06_RS09080;Name=SO06_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09080 NZ_MYDG01000005.1 Protein Homology CDS 59623 60180 . - 0 ID=cds-WP_000754796.1;Parent=gene-SO06_RS09080;Dbxref=GenBank:WP_000754796.1;Name=WP_000754796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=SO06_RS09080;product=DJ-1/PfpI family protein;protein_id=WP_000754796.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 60731 61234 . + . ID=gene-SO06_RS09085;Name=SO06_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09085 NZ_MYDG01000005.1 Protein Homology CDS 60731 61234 . + 0 ID=cds-WP_000741707.1;Parent=gene-SO06_RS09085;Dbxref=GenBank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=SO06_RS09085;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 61413 62051 . - . ID=gene-SO06_RS09090;Name=SO06_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09090 NZ_MYDG01000005.1 Protein Homology CDS 61413 62051 . - 0 ID=cds-WP_000684804.1;Parent=gene-SO06_RS09090;Dbxref=GenBank:WP_000684804.1;Name=WP_000684804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=SO06_RS09090;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000684804.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 62307 62642 . + . ID=gene-SO06_RS09095;Name=SO06_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09095 NZ_MYDG01000005.1 Protein Homology CDS 62307 62642 . + 0 ID=cds-WP_000803229.1;Parent=gene-SO06_RS09095;Dbxref=GenBank:WP_000803229.1;Name=WP_000803229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=SO06_RS09095;product=YecR-like lipofamily protein;protein_id=WP_000803229.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 62882 63379 . + . ID=gene-SO06_RS09100;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=SO06_RS09100 NZ_MYDG01000005.1 Protein Homology CDS 62882 63379 . + 0 ID=cds-WP_000920611.1;Parent=gene-SO06_RS09100;Dbxref=GenBank:WP_000920611.1;Name=WP_000920611.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=SO06_RS09100;product=non-heme ferritin;protein_id=WP_000920611.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 63425 63664 . - . ID=gene-SO06_RS09105;Name=SO06_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09105 NZ_MYDG01000005.1 Protein Homology CDS 63425 63664 . - 0 ID=cds-WP_076741631.1;Parent=gene-SO06_RS09105;Dbxref=GenBank:WP_076741631.1;Name=WP_076741631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=SO06_RS09105;product=YecH family metal-binding protein;protein_id=WP_076741631.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 63891 65102 . + . ID=gene-SO06_RS09110;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=SO06_RS09110 NZ_MYDG01000005.1 Protein Homology CDS 63891 65102 . + 0 ID=cds-WP_023204702.1;Parent=gene-SO06_RS09110;Dbxref=GenBank:WP_023204702.1;Name=WP_023204702.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=SO06_RS09110;product=tyrosine transporter TyrP;protein_id=WP_023204702.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 65177 65842 . - . ID=gene-SO06_RS09115;Name=SO06_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09115 NZ_MYDG01000005.1 Protein Homology CDS 65177 65842 . - 0 ID=cds-WP_000781521.1;Parent=gene-SO06_RS09115;Dbxref=GenBank:WP_000781521.1;Name=WP_000781521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=SO06_RS09115;product=YecA/YgfB family protein;protein_id=WP_000781521.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 66081 66407 . - . ID=gene-SO06_RS09120;Name=SO06_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09120 NZ_MYDG01000005.1 Protein Homology CDS 66081 66407 . - 0 ID=cds-WP_000240837.1;Parent=gene-SO06_RS09120;Dbxref=GenBank:WP_000240837.1;Name=WP_000240837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=SO06_RS09120;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240837.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 66619 68058 . - . ID=gene-SO06_RS09125;Name=SO06_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09125 NZ_MYDG01000005.1 Protein Homology CDS 66619 68058 . - 0 ID=cds-WP_080204202.1;Parent=gene-SO06_RS09125;Dbxref=GenBank:WP_080204202.1;Name=WP_080204202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=SO06_RS09125;product=SH3 domain-containing C40 family peptidase;protein_id=WP_080204202.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 68272 68604 . - . ID=gene-SO06_RS09130;Name=SO06_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09130 NZ_MYDG01000005.1 Protein Homology CDS 68272 68604 . - 0 ID=cds-WP_001556026.1;Parent=gene-SO06_RS09130;Dbxref=GenBank:WP_001556026.1;Name=WP_001556026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=SO06_RS09130;product=hypothetical protein;protein_id=WP_001556026.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 68854 68940 . - . ID=gene-SO06_RS09135;Name=SO06_RS09135;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS09135 NZ_MYDG01000005.1 tRNAscan-SE tRNA 68854 68940 . - . ID=rna-SO06_RS09135;Parent=gene-SO06_RS09135;anticodon=(pos:complement(68904..68906));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS09135;product=tRNA-Leu NZ_MYDG01000005.1 tRNAscan-SE exon 68854 68940 . - . ID=exon-SO06_RS09135-1;Parent=rna-SO06_RS09135;anticodon=(pos:complement(68904..68906));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS09135;product=tRNA-Leu NZ_MYDG01000005.1 RefSeq gene 68952 69025 . - . ID=gene-SO06_RS09140;Name=SO06_RS09140;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS09140 NZ_MYDG01000005.1 tRNAscan-SE tRNA 68952 69025 . - . ID=rna-SO06_RS09140;Parent=gene-SO06_RS09140;anticodon=(pos:complement(68991..68993));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS09140;product=tRNA-Cys NZ_MYDG01000005.1 tRNAscan-SE exon 68952 69025 . - . ID=exon-SO06_RS09140-1;Parent=rna-SO06_RS09140;anticodon=(pos:complement(68991..68993));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS09140;product=tRNA-Cys NZ_MYDG01000005.1 RefSeq gene 69077 69152 . - . ID=gene-SO06_RS09145;Name=SO06_RS09145;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS09145 NZ_MYDG01000005.1 tRNAscan-SE tRNA 69077 69152 . - . ID=rna-SO06_RS09145;Parent=gene-SO06_RS09145;anticodon=(pos:complement(69117..69119));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS09145;product=tRNA-Gly NZ_MYDG01000005.1 tRNAscan-SE exon 69077 69152 . - . ID=exon-SO06_RS09145-1;Parent=rna-SO06_RS09145;anticodon=(pos:complement(69117..69119));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS09145;product=tRNA-Gly NZ_MYDG01000005.1 RefSeq gene 69304 69852 . - . ID=gene-SO06_RS09150;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=SO06_RS09150 NZ_MYDG01000005.1 Protein Homology CDS 69304 69852 . - 0 ID=cds-WP_001160192.1;Parent=gene-SO06_RS09150;Dbxref=GenBank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=SO06_RS09150;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 69909 71741 . - . ID=gene-SO06_RS09155;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=SO06_RS09155 NZ_MYDG01000005.1 Protein Homology CDS 69909 71741 . - 0 ID=cds-WP_001289468.1;Parent=gene-SO06_RS09155;Dbxref=GenBank:WP_001289468.1;Name=WP_001289468.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=SO06_RS09155;product=excinuclease ABC subunit UvrC;protein_id=WP_001289468.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 71738 72394 . - . ID=gene-SO06_RS09160;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=SO06_RS09160 NZ_MYDG01000005.1 Protein Homology CDS 71738 72394 . - 0 ID=cds-WP_000611323.1;Parent=gene-SO06_RS09160;Dbxref=GenBank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=SO06_RS09160;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 72706 72861 . + . ID=gene-SO06_RS09165;Name=SO06_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09165 NZ_MYDG01000005.1 Protein Homology CDS 72706 72861 . + 0 ID=cds-WP_000546186.1;Parent=gene-SO06_RS09165;Dbxref=GenBank:WP_000546186.1;Name=WP_000546186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=SO06_RS09165;product=hypothetical protein;protein_id=WP_000546186.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 72858 73082 . + . ID=gene-SO06_RS09170;Name=SO06_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09170 NZ_MYDG01000005.1 Protein Homology CDS 72858 73082 . + 0 ID=cds-WP_000106483.1;Parent=gene-SO06_RS09170;Dbxref=GenBank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=SO06_RS09170;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 73149 73871 . - . ID=gene-SO06_RS09175;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=SO06_RS09175 NZ_MYDG01000005.1 Protein Homology CDS 73149 73871 . - 0 ID=cds-WP_001157172.1;Parent=gene-SO06_RS09175;Dbxref=GenBank:WP_001157172.1;Name=WP_001157172.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=SO06_RS09175;product=transcriptional regulator SdiA;protein_id=WP_001157172.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 74104 74856 . - . ID=gene-SO06_RS09180;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=SO06_RS09180 NZ_MYDG01000005.1 Protein Homology CDS 74104 74856 . - 0 ID=cds-WP_001273038.1;Parent=gene-SO06_RS09180;Dbxref=GenBank:WP_001273038.1;Name=WP_001273038.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=SO06_RS09180;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001273038.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 74853 75521 . - . ID=gene-SO06_RS09185;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=SO06_RS09185 NZ_MYDG01000005.1 Protein Homology CDS 74853 75521 . - 0 ID=cds-WP_023232071.1;Parent=gene-SO06_RS09185;Dbxref=GenBank:WP_023232071.1;Name=WP_023232071.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=SO06_RS09185;product=cystine ABC transporter permease;protein_id=WP_023232071.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 75542 76528 . - . ID=gene-SO06_RS09190;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=SO06_RS09190 NZ_MYDG01000005.1 Protein Homology CDS 75542 76528 . - 0 ID=cds-WP_023232070.1;Parent=gene-SO06_RS09190;Dbxref=GenBank:WP_023232070.1;Name=WP_023232070.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=SO06_RS09190;product=D-cysteine desulfhydrase;protein_id=WP_023232070.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 76682 77482 . - . ID=gene-SO06_RS09195;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=SO06_RS09195 NZ_MYDG01000005.1 Protein Homology CDS 76682 77482 . - 0 ID=cds-WP_000761636.1;Parent=gene-SO06_RS09195;Dbxref=GenBank:WP_000761636.1;Name=WP_000761636.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=SO06_RS09195;product=cystine ABC transporter substrate-binding protein;protein_id=WP_000761636.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 77629 78180 . - . ID=gene-SO06_RS09200;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=SO06_RS09200 NZ_MYDG01000005.1 Protein Homology CDS 77629 78180 . - 0 ID=cds-WP_000218080.1;Parent=gene-SO06_RS09200;Dbxref=GenBank:WP_000218080.1;Name=WP_000218080.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=SO06_RS09200;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218080.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 78239 78958 . - . ID=gene-SO06_RS09205;Name=SO06_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09205 NZ_MYDG01000005.1 Protein Homology CDS 78239 78958 . - 0 ID=cds-WP_001087453.1;Parent=gene-SO06_RS09205;Dbxref=GenBank:WP_001087453.1;Name=WP_001087453.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=SO06_RS09205;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 79155 80360 . - . ID=gene-SO06_RS09210;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=SO06_RS09210 NZ_MYDG01000005.1 Protein Homology CDS 79155 80360 . - 0 ID=cds-WP_048348806.1;Parent=gene-SO06_RS09210;Dbxref=GenBank:WP_048348806.1;Name=WP_048348806.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=SO06_RS09210;product=flagellin lysine-N-methylase;protein_id=WP_048348806.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 80439 81956 . - . ID=gene-SO06_RS09215;Name=SO06_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09215 NZ_MYDG01000005.1 Protein Homology CDS 80439 81956 . - 0 ID=cds-WP_048348807.1;Parent=gene-SO06_RS09215;Dbxref=GenBank:WP_048348807.1;Name=WP_048348807.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079837.1;locus_tag=SO06_RS09215;product=flagellin N-terminal helical domain-containing protein;protein_id=WP_048348807.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 81974 82213 . - . ID=gene-SO06_RS09220;Name=SO06_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09220 NZ_MYDG01000005.1 GeneMarkS-2+ CDS 81974 82213 . - 0 ID=cds-WP_001141165.1;Parent=gene-SO06_RS09220;Dbxref=GenBank:WP_001141165.1;Name=WP_001141165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS09220;product=hypothetical protein;protein_id=WP_001141165.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 82212 83618 . + . ID=gene-SO06_RS09225;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=SO06_RS09225 NZ_MYDG01000005.1 Protein Homology CDS 82212 83618 . + 0 ID=cds-WP_023232067.1;Parent=gene-SO06_RS09225;Dbxref=GenBank:WP_023232067.1;Name=WP_023232067.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=SO06_RS09225;product=flagellar filament capping protein FliD;protein_id=WP_023232067.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 83633 84040 . + . ID=gene-SO06_RS09230;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=SO06_RS09230 NZ_MYDG01000005.1 Protein Homology CDS 83633 84040 . + 0 ID=cds-WP_000287760.1;Parent=gene-SO06_RS09230;Dbxref=GenBank:WP_000287760.1;Name=WP_000287760.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=SO06_RS09230;product=flagellar export chaperone FliS;protein_id=WP_000287760.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 84040 84408 . + . ID=gene-SO06_RS09235;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=SO06_RS09235 NZ_MYDG01000005.1 Protein Homology CDS 84040 84408 . + 0 ID=cds-WP_000204899.1;Parent=gene-SO06_RS09235;Dbxref=GenBank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=SO06_RS09235;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 84480 85964 . + . ID=gene-SO06_RS09240;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=SO06_RS09240 NZ_MYDG01000005.1 Protein Homology CDS 84480 85964 . + 0 ID=cds-WP_000795489.1;Parent=gene-SO06_RS09240;Dbxref=GenBank:WP_000795489.1;Name=WP_000795489.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=SO06_RS09240;product=alpha-amylase;protein_id=WP_000795489.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 86004 86417 . - . ID=gene-SO06_RS09245;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=SO06_RS09245 NZ_MYDG01000005.1 Protein Homology CDS 86004 86417 . - 0 ID=cds-WP_000754694.1;Parent=gene-SO06_RS09245;Dbxref=GenBank:WP_000754694.1;Name=WP_000754694.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=SO06_RS09245;product=lipoprotein YedD;protein_id=WP_000754694.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 86546 87808 . + . ID=gene-SO06_RS09250;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=SO06_RS09250 NZ_MYDG01000005.1 Protein Homology CDS 86546 87808 . + 0 ID=cds-WP_324248798.1;Parent=gene-SO06_RS09250;Dbxref=GenBank:WP_324248798.1;Name=WP_324248798.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=SO06_RS09250;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_324248798.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 87805 88038 . + . ID=gene-SO06_RS09255;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=SO06_RS09255 NZ_MYDG01000005.1 Protein Homology CDS 87805 88038 . + 0 ID=cds-WP_000790504.1;Parent=gene-SO06_RS09255;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=SO06_RS09255;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 88310 88696 . + . ID=gene-SO06_RS09260;Name=SO06_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09260 NZ_MYDG01000005.1 Protein Homology CDS 88310 88696 . + 0 ID=cds-WP_000639596.1;Parent=gene-SO06_RS09260;Dbxref=GenBank:WP_000639596.1;Name=WP_000639596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=SO06_RS09260;product=hypothetical protein;protein_id=WP_000639596.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 88816 89130 . - . ID=gene-SO06_RS09265;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=SO06_RS09265 NZ_MYDG01000005.1 Protein Homology CDS 88816 89130 . - 0 ID=cds-WP_000719037.1;Parent=gene-SO06_RS09265;Dbxref=GenBank:WP_000719037.1;Name=WP_000719037.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=SO06_RS09265;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719037.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 89347 91041 . + . ID=gene-SO06_RS09270;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=SO06_RS09270 NZ_MYDG01000005.1 Protein Homology CDS 89347 91041 . + 0 ID=cds-WP_048348808.1;Parent=gene-SO06_RS09270;Dbxref=GenBank:WP_048348808.1;Name=WP_048348808.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=SO06_RS09270;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_048348808.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 91034 92029 . + . ID=gene-SO06_RS09275;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=SO06_RS09275 NZ_MYDG01000005.1 Protein Homology CDS 91034 92029 . + 0 ID=cds-WP_000067735.1;Parent=gene-SO06_RS09275;Dbxref=GenBank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=SO06_RS09275;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 92022 92729 . + . ID=gene-SO06_RS09280;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=SO06_RS09280 NZ_MYDG01000005.1 Protein Homology CDS 92022 92729 . + 0 ID=cds-WP_000064158.1;Parent=gene-SO06_RS09280;Dbxref=GenBank:WP_000064158.1;Name=WP_000064158.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=SO06_RS09280;product=flagellar assembly protein FliH;protein_id=WP_000064158.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 92729 94099 . + . ID=gene-SO06_RS09285;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=SO06_RS09285 NZ_MYDG01000005.1 Protein Homology CDS 92729 94099 . + 0 ID=cds-WP_080204203.1;Parent=gene-SO06_RS09285;Dbxref=GenBank:WP_080204203.1;Name=WP_080204203.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=SO06_RS09285;product=flagellar protein export ATPase FliI;protein_id=WP_080204203.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 94121 94564 . + . ID=gene-SO06_RS09290;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=SO06_RS09290 NZ_MYDG01000005.1 Protein Homology CDS 94121 94564 . + 0 ID=cds-WP_000046981.1;Parent=gene-SO06_RS09290;Dbxref=GenBank:WP_000046981.1;Name=WP_000046981.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=SO06_RS09290;product=flagellar export protein FliJ;protein_id=WP_000046981.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 94561 95784 . + . ID=gene-SO06_RS09295;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=SO06_RS09295 NZ_MYDG01000005.1 Protein Homology CDS 94561 95784 . + 0 ID=cds-WP_023232062.1;Parent=gene-SO06_RS09295;Dbxref=GenBank:WP_023232062.1;Name=WP_023232062.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=SO06_RS09295;product=flagellar hook length control protein FliK;protein_id=WP_023232062.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 95889 96356 . + . ID=gene-SO06_RS09300;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=SO06_RS09300 NZ_MYDG01000005.1 Protein Homology CDS 95889 96356 . + 0 ID=cds-WP_000132169.1;Parent=gene-SO06_RS09300;Dbxref=GenBank:WP_000132169.1;Name=WP_000132169.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=SO06_RS09300;product=flagellar basal body-associated protein FliL;protein_id=WP_000132169.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 96361 97365 . + . ID=gene-SO06_RS09305;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=SO06_RS09305 NZ_MYDG01000005.1 Protein Homology CDS 96361 97365 . + 0 ID=cds-WP_000502811.1;Parent=gene-SO06_RS09305;Dbxref=GenBank:WP_000502811.1;Name=WP_000502811.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=SO06_RS09305;product=flagellar motor switch protein FliM;protein_id=WP_000502811.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 97362 97775 . + . ID=gene-SO06_RS09310;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=SO06_RS09310 NZ_MYDG01000005.1 Protein Homology CDS 97362 97775 . + 0 ID=cds-WP_001282111.1;Parent=gene-SO06_RS09310;Dbxref=GenBank:WP_001282111.1;Name=WP_001282111.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=SO06_RS09310;product=flagellar motor switch protein FliN;protein_id=WP_001282111.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 97775 98152 . + . ID=gene-SO06_RS09315;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=SO06_RS09315 NZ_MYDG01000005.1 Protein Homology CDS 97775 98152 . + 0 ID=cds-WP_000978276.1;Parent=gene-SO06_RS09315;Dbxref=GenBank:WP_000978276.1;Name=WP_000978276.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=SO06_RS09315;product=flagellar biosynthetic protein FliO;protein_id=WP_000978276.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 98152 98889 . + . ID=gene-SO06_RS09320;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=SO06_RS09320 NZ_MYDG01000005.1 Protein Homology CDS 98152 98889 . + 0 ID=cds-WP_001253411.1;Parent=gene-SO06_RS09320;Dbxref=GenBank:WP_001253411.1;Name=WP_001253411.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=SO06_RS09320;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253411.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 98899 99168 . + . ID=gene-SO06_RS09325;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=SO06_RS09325 NZ_MYDG01000005.1 Protein Homology CDS 98899 99168 . + 0 ID=cds-WP_000187355.1;Parent=gene-SO06_RS09325;Dbxref=GenBank:WP_000187355.1;Name=WP_000187355.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=SO06_RS09325;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 99177 99971 . + . ID=gene-SO06_RS09330;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=SO06_RS09330 NZ_MYDG01000005.1 Protein Homology CDS 99177 99971 . + 0 ID=cds-WP_000616953.1;Parent=gene-SO06_RS09330;Dbxref=GenBank:WP_000616953.1;Name=WP_000616953.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=SO06_RS09330;product=flagellar biosynthetic protein FliR;protein_id=WP_000616953.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 100253 100876 . + . ID=gene-SO06_RS09335;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=SO06_RS09335 NZ_MYDG01000005.1 Protein Homology CDS 100253 100876 . + 0 ID=cds-WP_000103971.1;Parent=gene-SO06_RS09335;Dbxref=GenBank:WP_000103971.1;Name=WP_000103971.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=SO06_RS09335;product=transcriptional regulator RcsA;protein_id=WP_000103971.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 100915 101109 . - . ID=gene-SO06_RS09340;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=SO06_RS09340 NZ_MYDG01000005.1 Protein Homology CDS 100915 101109 . - 0 ID=cds-WP_000867218.1;Parent=gene-SO06_RS09340;Dbxref=GenBank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=SO06_RS09340;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 101238 101465 . + . ID=gene-SO06_RS09345;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=SO06_RS09345 NZ_MYDG01000005.1 Protein Homology CDS 101238 101465 . + 0 ID=cds-WP_000844798.1;Parent=gene-SO06_RS09345;Dbxref=GenBank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=SO06_RS09345;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 101775 102590 . + . ID=gene-SO06_RS09350;Name=SO06_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09350 NZ_MYDG01000005.1 Protein Homology CDS 101775 102590 . + 0 ID=cds-WP_023232061.1;Parent=gene-SO06_RS09350;Dbxref=GenBank:WP_023232061.1;Name=WP_023232061.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=SO06_RS09350;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_023232061.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 102569 104281 . - . ID=gene-SO06_RS09355;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=SO06_RS09355 NZ_MYDG01000005.1 Protein Homology CDS 102569 104281 . - 0 ID=cds-WP_001119828.1;Parent=gene-SO06_RS09355;Dbxref=GenBank:WP_001119828.1;Name=WP_001119828.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=SO06_RS09355;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_001119828.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 104446 104631 . - . ID=gene-SO06_RS09360;Name=SO06_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09360 NZ_MYDG01000005.1 Protein Homology CDS 104446 104631 . - 0 ID=cds-WP_001521741.1;Parent=gene-SO06_RS09360;Dbxref=GenBank:WP_001521741.1;Name=WP_001521741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=SO06_RS09360;product=YodC family protein;protein_id=WP_001521741.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 104708 105625 . - . ID=gene-SO06_RS09365;Name=SO06_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09365 NZ_MYDG01000005.1 Protein Homology CDS 104708 105625 . - 0 ID=cds-WP_085920526.1;Parent=gene-SO06_RS09365;Dbxref=GenBank:WP_085920526.1;Name=WP_085920526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=SO06_RS09365;product=DUF808 domain-containing protein;protein_id=WP_085920526.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 105795 106715 . + . ID=gene-SO06_RS09370;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=SO06_RS09370 NZ_MYDG01000005.1 Protein Homology CDS 105795 106715 . + 0 ID=cds-WP_023232060.1;Parent=gene-SO06_RS09370;Dbxref=GenBank:WP_023232060.1;Name=WP_023232060.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=SO06_RS09370;product=drug/metabolite exporter YedA;protein_id=WP_023232060.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 106704 107174 . - . ID=gene-SO06_RS09375;Name=SO06_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09375 NZ_MYDG01000005.1 Protein Homology CDS 106704 107174 . - 0 ID=cds-WP_000785978.1;Parent=gene-SO06_RS09375;Dbxref=GenBank:WP_000785978.1;Name=WP_000785978.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=SO06_RS09375;product=very short patch repair endonuclease;protein_id=WP_000785978.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 107155 108585 . - . ID=gene-SO06_RS09380;Name=SO06_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09380 NZ_MYDG01000005.1 Protein Homology CDS 107155 108585 . - 0 ID=cds-WP_023232059.1;Parent=gene-SO06_RS09380;Dbxref=GenBank:WP_023232059.1;Name=WP_023232059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=SO06_RS09380;product=DNA cytosine methyltransferase;protein_id=WP_023232059.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 108659 109354 . - . ID=gene-SO06_RS09385;Name=SO06_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09385 NZ_MYDG01000005.1 Protein Homology CDS 108659 109354 . - 0 ID=cds-WP_000377042.1;Parent=gene-SO06_RS09385;Dbxref=GenBank:WP_000377042.1;Name=WP_000377042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=SO06_RS09385;product=phosphohydrolase;protein_id=WP_000377042.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 109434 109745 . - . ID=gene-SO06_RS09390;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=SO06_RS09390 NZ_MYDG01000005.1 Protein Homology CDS 109434 109745 . - 0 ID=cds-WP_000107443.1;Parent=gene-SO06_RS09390;Dbxref=GenBank:WP_000107443.1;Name=WP_000107443.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460945.1;locus_tag=SO06_RS09390;product=cell division protein DrpB;protein_id=WP_000107443.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 110396 111580 . + . ID=gene-SO06_RS09395;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=SO06_RS09395 NZ_MYDG01000005.1 Protein Homology CDS 110396 111580 . + 0 ID=cds-WP_017441838.1;Parent=gene-SO06_RS09395;Dbxref=GenBank:WP_017441838.1;Name=WP_017441838.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=SO06_RS09395;product=porin OmpS1;protein_id=WP_017441838.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 111840 112028 . - . ID=gene-SO06_RS09400;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=SO06_RS09400 NZ_MYDG01000005.1 Protein Homology CDS 111840 112028 . - 0 ID=cds-WP_024131109.1;Parent=gene-SO06_RS09400;Dbxref=GenBank:WP_024131109.1;Name=WP_024131109.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=SO06_RS09400;product=cold shock small protein YmcF;protein_id=WP_024131109.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 112039 112251 . - . ID=gene-SO06_RS09405;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=SO06_RS09405 NZ_MYDG01000005.1 Protein Homology CDS 112039 112251 . - 0 ID=cds-WP_000208509.1;Parent=gene-SO06_RS09405;Dbxref=GenBank:WP_000208509.1;Name=WP_000208509.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=SO06_RS09405;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000208509.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 112830 113940 . - . ID=gene-SO06_RS24995;Name=SO06_RS24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24995 NZ_MYDG01000005.1 Protein Homology CDS 113687 113940 . - 0 ID=cds-WP_094204703.1;Parent=gene-SO06_RS24995;Dbxref=GenBank:WP_094204703.1;Name=WP_094204703.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=SO06_RS24995;product=IS3 family transposase;protein_id=WP_094204703.1;transl_table=11 NZ_MYDG01000005.1 Protein Homology CDS 112830 113688 . - 1 ID=cds-WP_094204703.1;Parent=gene-SO06_RS24995;Dbxref=GenBank:WP_094204703.1;Name=WP_094204703.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=SO06_RS24995;product=IS3 family transposase;protein_id=WP_094204703.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 114377 114559 . + . ID=gene-SO06_RS25265;Name=SO06_RS25265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25265 NZ_MYDG01000005.1 GeneMarkS-2+ CDS 114377 114559 . + 0 ID=cds-WP_023232608.1;Parent=gene-SO06_RS25265;Dbxref=GenBank:WP_023232608.1;Name=WP_023232608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS25265;product=hypothetical protein;protein_id=WP_023232608.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 114625 115260 . + . ID=gene-SO06_RS09430;Name=SO06_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09430 NZ_MYDG01000005.1 Protein Homology CDS 114625 115260 . + 0 ID=cds-WP_023232607.1;Parent=gene-SO06_RS09430;Dbxref=GenBank:WP_023232607.1;Name=WP_023232607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001205572.1;locus_tag=SO06_RS09430;product=GAD-like domain-containing protein;protein_id=WP_023232607.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 115527 115868 . + . ID=gene-SO06_RS25000;Name=SO06_RS25000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25000 NZ_MYDG01000005.1 GeneMarkS-2+ CDS 115527 115868 . + 0 ID=cds-WP_023232606.1;Parent=gene-SO06_RS25000;Dbxref=GenBank:WP_023232606.1;Name=WP_023232606.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS25000;product=hypothetical protein;protein_id=WP_023232606.1;transl_table=11 NZ_MYDG01000005.1 RefSeq pseudogene 117081 117209 . - . ID=gene-SO06_RS25525;Name=SO06_RS25525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25525;partial=true;pseudo=true;start_range=.,117081 NZ_MYDG01000005.1 Protein Homology CDS 117081 117209 . - 0 ID=cds-SO06_RS25525;Parent=gene-SO06_RS25525;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607533.1;locus_tag=SO06_RS25525;partial=true;product=integrase;pseudo=true;start_range=.,117081;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 117488 118276 . - . ID=gene-SO06_RS09450;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=SO06_RS09450 NZ_MYDG01000005.1 Protein Homology CDS 117488 118276 . - 0 ID=cds-WP_000533527.1;Parent=gene-SO06_RS09450;Dbxref=GenBank:WP_000533527.1;Name=WP_000533527.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=SO06_RS09450;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533527.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 119169 120677 . - . ID=gene-SO06_RS09460;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=SO06_RS09460 NZ_MYDG01000005.1 Protein Homology CDS 119169 120677 . - 0 ID=cds-WP_001018467.1;Parent=gene-SO06_RS09460;Dbxref=GenBank:WP_001018467.1;Name=WP_001018467.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=SO06_RS09460;product=sodium/proline symporter PutP;protein_id=WP_001018467.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 121099 125061 . + . ID=gene-SO06_RS09470;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=SO06_RS09470 NZ_MYDG01000005.1 Protein Homology CDS 121099 125061 . + 0 ID=cds-WP_047607648.1;Parent=gene-SO06_RS09470;Dbxref=GenBank:WP_047607648.1;Name=WP_047607648.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=SO06_RS09470;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_047607648.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 125120 125515 . + . ID=gene-SO06_RS09475;Name=SO06_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09475 NZ_MYDG01000005.1 Protein Homology CDS 125120 125515 . + 0 ID=cds-WP_000821059.1;Parent=gene-SO06_RS09475;Dbxref=GenBank:WP_000821059.1;Name=WP_000821059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=SO06_RS09475;product=lysozyme inhibitor LprI family protein;protein_id=WP_000821059.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 125512 126150 . - . ID=gene-SO06_RS09480;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=SO06_RS09480 NZ_MYDG01000005.1 Protein Homology CDS 125512 126150 . - 0 ID=cds-WP_000083128.1;Parent=gene-SO06_RS09480;Dbxref=GenBank:WP_000083128.1;Name=WP_000083128.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=SO06_RS09480;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083128.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 126287 126454 . - . ID=gene-SO06_RS09485;Name=SO06_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09485 NZ_MYDG01000005.1 Protein Homology CDS 126287 126454 . - 0 ID=cds-WP_001273663.1;Parent=gene-SO06_RS09485;Dbxref=GenBank:WP_001273663.1;Name=WP_001273663.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=SO06_RS09485;product=general stress protein;protein_id=WP_001273663.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 126839 127435 . + . ID=gene-SO06_RS09490;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=SO06_RS09490 NZ_MYDG01000005.1 Protein Homology CDS 126839 127435 . + 0 ID=cds-WP_001062898.1;Parent=gene-SO06_RS09490;Dbxref=GenBank:WP_001062898.1;Name=WP_001062898.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=SO06_RS09490;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062898.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 127456 127683 . + . ID=gene-SO06_RS09495;Name=SO06_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09495 NZ_MYDG01000005.1 Protein Homology CDS 127456 127683 . + 0 ID=cds-WP_001143125.1;Parent=gene-SO06_RS09495;Dbxref=GenBank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=SO06_RS09495;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 127717 128958 . - . ID=gene-SO06_RS09500;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=SO06_RS09500 NZ_MYDG01000005.1 Protein Homology CDS 127717 128958 . - 0 ID=cds-WP_000749201.1;Parent=gene-SO06_RS09500;Dbxref=GenBank:WP_000749201.1;Name=WP_000749201.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=SO06_RS09500;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_000749201.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 129091 129597 . - . ID=gene-SO06_RS09505;Name=SO06_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09505 NZ_MYDG01000005.1 Protein Homology CDS 129091 129597 . - 0 ID=cds-WP_080204204.1;Parent=gene-SO06_RS09505;Dbxref=GenBank:WP_080204204.1;Name=WP_080204204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=SO06_RS09505;product=protein disulfide oxidoreductase;protein_id=WP_080204204.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 129587 130210 . - . ID=gene-SO06_RS09510;Name=SO06_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09510 NZ_MYDG01000005.1 Protein Homology CDS 129587 130210 . - 0 ID=cds-WP_000876690.1;Parent=gene-SO06_RS09510;Dbxref=GenBank:WP_000876690.1;Name=WP_000876690.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=SO06_RS09510;product=DsbA family protein;protein_id=WP_000876690.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 130207 132093 . - . ID=gene-SO06_RS09515;Name=SO06_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09515 NZ_MYDG01000005.1 Protein Homology CDS 130207 132093 . - 0 ID=cds-WP_061380400.1;Parent=gene-SO06_RS09515;Dbxref=GenBank:WP_061380400.1;Name=WP_061380400.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=SO06_RS09515;product=protein-disulfide reductase DsbD family protein;protein_id=WP_061380400.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 132142 132504 . - . ID=gene-SO06_RS09520;Name=SO06_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09520 NZ_MYDG01000005.1 Protein Homology CDS 132142 132504 . - 0 ID=cds-WP_001118902.1;Parent=gene-SO06_RS09520;Dbxref=GenBank:WP_001118902.1;Name=WP_001118902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=SO06_RS09520;product=copper resistance protein;protein_id=WP_001118902.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 132739 133659 . + . ID=gene-SO06_RS09530;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=SO06_RS09530 NZ_MYDG01000005.1 Protein Homology CDS 132739 133659 . + 0 ID=cds-WP_079945378.1;Parent=gene-SO06_RS09530;Dbxref=GenBank:WP_079945378.1;Name=WP_079945378.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=SO06_RS09530;product=curved DNA-binding protein;protein_id=WP_079945378.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 133659 133964 . + . ID=gene-SO06_RS09535;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=SO06_RS09535 NZ_MYDG01000005.1 Protein Homology CDS 133659 133964 . + 0 ID=cds-WP_001284251.1;Parent=gene-SO06_RS09535;Dbxref=GenBank:WP_001284251.1;Name=WP_001284251.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=SO06_RS09535;product=chaperone modulator CbpM;protein_id=WP_001284251.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 134618 134980 . + . ID=gene-SO06_RS09545;Name=SO06_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09545 NZ_MYDG01000005.1 Protein Homology CDS 134618 134980 . + 0 ID=cds-WP_001537781.1;Parent=gene-SO06_RS09545;Dbxref=GenBank:WP_001537781.1;Name=WP_001537781.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=SO06_RS09545;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 135388 136326 . - . ID=gene-SO06_RS09550;Name=SO06_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09550 NZ_MYDG01000005.1 Protein Homology CDS 135388 136326 . - 0 ID=cds-WP_000976561.1;Parent=gene-SO06_RS09550;Dbxref=GenBank:WP_000976561.1;Name=WP_000976561.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=SO06_RS09550;product=MBL fold metallo-hydrolase;protein_id=WP_000976561.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 136340 137236 . - . ID=gene-SO06_RS09555;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=SO06_RS09555 NZ_MYDG01000005.1 Protein Homology CDS 136340 137236 . - 0 ID=cds-WP_000336602.1;Parent=gene-SO06_RS09555;Dbxref=GenBank:WP_000336602.1;Name=WP_000336602.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=SO06_RS09555;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000336602.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 137246 138622 . - . ID=gene-SO06_RS09560;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=SO06_RS09560 NZ_MYDG01000005.1 Protein Homology CDS 137246 138622 . - 0 ID=cds-WP_001285795.1;Parent=gene-SO06_RS09560;Dbxref=GenBank:WP_001285795.1;Name=WP_001285795.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=SO06_RS09560;product=4-hydroxyphenylacetate permease;protein_id=WP_001285795.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 138695 139486 . - . ID=gene-SO06_RS09565;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=SO06_RS09565 NZ_MYDG01000005.1 Protein Homology CDS 138695 139486 . - 0 ID=cds-WP_080204205.1;Parent=gene-SO06_RS09565;Dbxref=GenBank:WP_080204205.1;Name=WP_080204205.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=SO06_RS09565;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_080204205.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 139497 140300 . - . ID=gene-SO06_RS09570;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=SO06_RS09570 NZ_MYDG01000005.1 Protein Homology CDS 139497 140300 . - 0 ID=cds-WP_000884795.1;Parent=gene-SO06_RS09570;Dbxref=GenBank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=SO06_RS09570;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000884795.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 140443 140823 . - . ID=gene-SO06_RS09575;Name=SO06_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09575 NZ_MYDG01000005.1 Protein Homology CDS 140443 140823 . - 0 ID=cds-WP_001119849.1;Parent=gene-SO06_RS09575;Dbxref=GenBank:WP_001119849.1;Name=WP_001119849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=SO06_RS09575;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119849.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 140833 141684 . - . ID=gene-SO06_RS09580;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=SO06_RS09580 NZ_MYDG01000005.1 Protein Homology CDS 140833 141684 . - 0 ID=cds-WP_000517001.1;Parent=gene-SO06_RS09580;Dbxref=GenBank:WP_000517001.1;Name=WP_000517001.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=SO06_RS09580;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000517001.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 141686 143152 . - . ID=gene-SO06_RS09585;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=SO06_RS09585 NZ_MYDG01000005.1 Protein Homology CDS 141686 143152 . - 0 ID=cds-WP_000723529.1;Parent=gene-SO06_RS09585;Dbxref=GenBank:WP_000723529.1;Name=WP_000723529.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=SO06_RS09585;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000723529.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 143149 144438 . - . ID=gene-SO06_RS09590;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=SO06_RS09590 NZ_MYDG01000005.1 Protein Homology CDS 143149 144438 . - 0 ID=cds-WP_023227208.1;Parent=gene-SO06_RS09590;Dbxref=GenBank:WP_023227208.1;Name=WP_023227208.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=SO06_RS09590;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_023227208.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 144713 145153 . + . ID=gene-SO06_RS09595;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=SO06_RS09595 NZ_MYDG01000005.1 Protein Homology CDS 144713 145153 . + 0 ID=cds-WP_000543922.1;Parent=gene-SO06_RS09595;Dbxref=GenBank:WP_000543922.1;Name=WP_000543922.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=SO06_RS09595;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543922.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 145371 146933 . + . ID=gene-SO06_RS09600;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=SO06_RS09600 NZ_MYDG01000005.1 Protein Homology CDS 145371 146933 . + 0 ID=cds-WP_000801496.1;Parent=gene-SO06_RS09600;Dbxref=GenBank:WP_000801496.1;Name=WP_000801496.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=SO06_RS09600;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801496.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 146951 147463 . + . ID=gene-SO06_RS09605;Name=SO06_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09605 NZ_MYDG01000005.1 Protein Homology CDS 146951 147463 . + 0 ID=cds-WP_001195556.1;Parent=gene-SO06_RS09605;Dbxref=GenBank:WP_001195556.1;Name=WP_001195556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=SO06_RS09605;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195556.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 147796 148206 . - . ID=gene-SO06_RS09615;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=SO06_RS09615 NZ_MYDG01000005.1 Protein Homology CDS 147796 148206 . - 0 ID=cds-WP_000833188.1;Parent=gene-SO06_RS09615;Dbxref=GenBank:WP_000833188.1;Name=WP_000833188.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=SO06_RS09615;product=hydroxyisourate hydrolase;protein_id=WP_000833188.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 148342 149022 . + . ID=gene-SO06_RS09620;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=SO06_RS09620 NZ_MYDG01000005.1 Protein Homology CDS 148342 149022 . + 0 ID=cds-WP_023231786.1;Parent=gene-SO06_RS09620;Dbxref=GenBank:WP_023231786.1;Name=WP_023231786.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=SO06_RS09620;product=response regulator transcription factor HprR;protein_id=WP_023231786.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 149015 150379 . + . ID=gene-SO06_RS09625;Name=SO06_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09625 NZ_MYDG01000005.1 Protein Homology CDS 149015 150379 . + 0 ID=cds-WP_023216403.1;Parent=gene-SO06_RS09625;Dbxref=GenBank:WP_023216403.1;Name=WP_023216403.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=SO06_RS09625;product=heavy metal sensor histidine kinase;protein_id=WP_023216403.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 150552 152021 . + . ID=gene-SO06_RS09630;Name=SO06_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09630 NZ_MYDG01000005.1 Protein Homology CDS 150552 152021 . + 0 ID=cds-WP_020898652.1;Parent=gene-SO06_RS09630;Dbxref=GenBank:WP_020898652.1;Name=WP_020898652.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=SO06_RS09630;product=C69 family dipeptidase;protein_id=WP_020898652.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 152130 152240 . + . ID=gene-SO06_RS09635;Name=SO06_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09635 NZ_MYDG01000005.1 Protein Homology CDS 152130 152240 . + 0 ID=cds-WP_000174815.1;Parent=gene-SO06_RS09635;Dbxref=GenBank:WP_000174815.1;Name=WP_000174815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=SO06_RS09635;product=hypothetical protein;protein_id=WP_000174815.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 152241 152411 . - . ID=gene-SO06_RS09640;Name=SO06_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09640 NZ_MYDG01000005.1 Protein Homology CDS 152241 152411 . - 0 ID=cds-WP_001111006.1;Parent=gene-SO06_RS09640;Dbxref=GenBank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=SO06_RS09640;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 152743 154428 . + . ID=gene-SO06_RS09645;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=SO06_RS09645 NZ_MYDG01000005.1 Protein Homology CDS 152743 154428 . + 0 ID=cds-WP_023231787.1;Parent=gene-SO06_RS09645;Dbxref=GenBank:WP_023231787.1;Name=WP_023231787.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=SO06_RS09645;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_023231787.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 154445 154786 . + . ID=gene-SO06_RS09650;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=SO06_RS09650 NZ_MYDG01000005.1 Protein Homology CDS 154445 154786 . + 0 ID=cds-WP_000444723.1;Parent=gene-SO06_RS09650;Dbxref=GenBank:WP_000444723.1;Name=WP_000444723.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=SO06_RS09650;product=type III secretion system chaperone SigE;protein_id=WP_000444723.1;transl_table=11 NZ_MYDG01000005.1 RefSeq pseudogene 154796 155117 . - . ID=gene-SO06_RS25530;Name=SO06_RS25530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25530;pseudo=true NZ_MYDG01000005.1 Protein Homology CDS 154796 155117 . - 0 ID=cds-SO06_RS25530;Parent=gene-SO06_RS25530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=SO06_RS25530;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 155767 156642 . + . ID=gene-SO06_RS09655;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=SO06_RS09655 NZ_MYDG01000005.1 Protein Homology CDS 155767 156642 . + 0 ID=cds-WP_023231788.1;Parent=gene-SO06_RS09655;Dbxref=GenBank:WP_023231788.1;Name=WP_023231788.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=SO06_RS09655;product=SPI-2 type III secretion system effector PipB;protein_id=WP_023231788.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 156864 157544 . + . ID=gene-SO06_RS09660;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=SO06_RS09660 NZ_MYDG01000005.1 Protein Homology CDS 156864 157544 . + 0 ID=cds-WP_000938180.1;Parent=gene-SO06_RS09660;Dbxref=GenBank:WP_000938180.1;Name=WP_000938180.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=SO06_RS09660;product=type III secretion system effector protease PipA;protein_id=WP_000938180.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 157681 157768 . - . ID=gene-SO06_RS09665;Name=SO06_RS09665;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS09665 NZ_MYDG01000005.1 tRNAscan-SE tRNA 157681 157768 . - . ID=rna-SO06_RS09665;Parent=gene-SO06_RS09665;anticodon=(pos:complement(157732..157734));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS09665;product=tRNA-Ser NZ_MYDG01000005.1 tRNAscan-SE exon 157681 157768 . - . ID=exon-SO06_RS09665-1;Parent=rna-SO06_RS09665;anticodon=(pos:complement(157732..157734));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS09665;product=tRNA-Ser NZ_MYDG01000005.1 RefSeq gene 158163 158822 . + . ID=gene-SO06_RS09670;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=SO06_RS09670 NZ_MYDG01000005.1 Protein Homology CDS 158163 158822 . + 0 ID=cds-WP_000374046.1;Parent=gene-SO06_RS09670;Dbxref=GenBank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=SO06_RS09670;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 158909 159238 . + . ID=gene-SO06_RS09675;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=SO06_RS09675 NZ_MYDG01000005.1 Protein Homology CDS 158909 159238 . + 0 ID=cds-WP_000904449.1;Parent=gene-SO06_RS09675;Dbxref=GenBank:WP_000904449.1;Name=WP_000904449.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=SO06_RS09675;product=sulfurtransferase TusE;protein_id=WP_000904449.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 159235 159516 . - . ID=gene-SO06_RS09680;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=SO06_RS09680 NZ_MYDG01000005.1 Protein Homology CDS 159235 159516 . - 0 ID=cds-WP_000072884.1;Parent=gene-SO06_RS09680;Dbxref=GenBank:WP_000072884.1;Name=WP_000072884.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=SO06_RS09680;product=acylphosphatase;protein_id=WP_000072884.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 159565 160344 . - . ID=gene-SO06_RS09685;Name=SO06_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09685 NZ_MYDG01000005.1 Protein Homology CDS 159565 160344 . - 0 ID=cds-WP_017465795.1;Parent=gene-SO06_RS09685;Dbxref=GenBank:WP_017465795.1;Name=WP_017465795.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=SO06_RS09685;product=AraC family transcriptional regulator;protein_id=WP_017465795.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 160370 160918 . - . ID=gene-SO06_RS09690;Name=SO06_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09690 NZ_MYDG01000005.1 Protein Homology CDS 160370 160918 . - 0 ID=cds-WP_024155072.1;Parent=gene-SO06_RS09690;Dbxref=GenBank:WP_024155072.1;Name=WP_024155072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=SO06_RS09690;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_024155072.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 161133 162344 . + . ID=gene-SO06_RS09695;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=SO06_RS09695 NZ_MYDG01000005.1 Protein Homology CDS 161133 162344 . + 0 ID=cds-WP_000140480.1;Parent=gene-SO06_RS09695;Dbxref=GenBank:WP_000140480.1;Name=WP_000140480.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=SO06_RS09695;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000140480.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 162402 162719 . + . ID=gene-SO06_RS09700;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=SO06_RS09700 NZ_MYDG01000005.1 Protein Homology CDS 162402 162719 . + 0 ID=cds-WP_000561983.1;Parent=gene-SO06_RS09700;Dbxref=GenBank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=SO06_RS09700;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 162764 163177 . - . ID=gene-SO06_RS09705;Name=SO06_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09705 NZ_MYDG01000005.1 Protein Homology CDS 162764 163177 . - 0 ID=cds-WP_001537782.1;Parent=gene-SO06_RS09705;Dbxref=GenBank:WP_001537782.1;Name=WP_001537782.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=SO06_RS09705;product=CoA-binding protein;protein_id=WP_001537782.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 163351 164013 . + . ID=gene-SO06_RS09710;Name=SO06_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09710 NZ_MYDG01000005.1 Protein Homology CDS 163351 164013 . + 0 ID=cds-WP_000847736.1;Parent=gene-SO06_RS09710;Dbxref=GenBank:WP_000847736.1;Name=WP_000847736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=SO06_RS09710;product=DUF2057 family protein;protein_id=WP_000847736.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 164108 164566 . + . ID=gene-SO06_RS09715;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=SO06_RS09715 NZ_MYDG01000005.1 Protein Homology CDS 164108 164566 . + 0 ID=cds-WP_000424187.1;Parent=gene-SO06_RS09715;Dbxref=GenBank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=SO06_RS09715;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 164602 166656 . - . ID=gene-SO06_RS09720;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=SO06_RS09720 NZ_MYDG01000005.1 Protein Homology CDS 164602 166656 . - 0 ID=cds-WP_023231792.1;Parent=gene-SO06_RS09720;Dbxref=GenBank:WP_023231792.1;Name=WP_023231792.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=SO06_RS09720;product=DNA helicase IV;protein_id=WP_023231792.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 166780 167226 . + . ID=gene-SO06_RS09725;Name=SO06_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09725 NZ_MYDG01000005.1 Protein Homology CDS 166780 167226 . + 0 ID=cds-WP_001261222.1;Parent=gene-SO06_RS09725;Dbxref=GenBank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=SO06_RS09725;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 167245 169398 . + . ID=gene-SO06_RS09730;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=SO06_RS09730 NZ_MYDG01000005.1 Protein Homology CDS 167245 169398 . + 0 ID=cds-WP_000950881.1;Parent=gene-SO06_RS09730;Dbxref=GenBank:WP_000950881.1;Name=WP_000950881.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=SO06_RS09730;product=YccS family putative transporter;protein_id=WP_000950881.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 169385 169990 . - . ID=gene-SO06_RS09735;Name=SO06_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09735 NZ_MYDG01000005.1 Protein Homology CDS 169385 169990 . - 0 ID=cds-WP_023231422.1;Parent=gene-SO06_RS09735;Dbxref=GenBank:WP_023231422.1;Name=WP_023231422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=SO06_RS09735;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_023231422.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 170207 170716 . + . ID=gene-SO06_RS09740;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=SO06_RS09740 NZ_MYDG01000005.1 Protein Homology CDS 170207 170716 . + 0 ID=cds-WP_000288732.1;Parent=gene-SO06_RS09740;Dbxref=GenBank:WP_000288732.1;Name=WP_000288732.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=SO06_RS09740;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288732.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 171073 172125 . + . ID=gene-SO06_RS09745;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=SO06_RS09745 NZ_MYDG01000005.1 Protein Homology CDS 171073 172125 . + 0 ID=cds-WP_001670727.1;Parent=gene-SO06_RS09745;Dbxref=GenBank:WP_001670727.1;Name=WP_001670727.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=SO06_RS09745;product=porin OmpA;protein_id=WP_001670727.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 172197 172649 . - . ID=gene-SO06_RS09750;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=SO06_RS09750 NZ_MYDG01000005.1 Protein Homology CDS 172197 172649 . - 0 ID=cds-WP_000877172.1;Parent=gene-SO06_RS09750;Dbxref=GenBank:WP_000877172.1;Name=WP_000877172.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=SO06_RS09750;product=macrodomain Ter protein MatP;protein_id=WP_000877172.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 172835 174595 . + . ID=gene-SO06_RS09755;Name=SO06_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09755 NZ_MYDG01000005.1 Protein Homology CDS 172835 174595 . + 0 ID=cds-WP_000156448.1;Parent=gene-SO06_RS09755;Dbxref=GenBank:WP_000156448.1;Name=WP_000156448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=SO06_RS09755;product=AAA family ATPase;protein_id=WP_000156448.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 174664 175182 . + . ID=gene-SO06_RS09760;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=SO06_RS09760 NZ_MYDG01000005.1 Protein Homology CDS 174664 175182 . + 0 ID=cds-WP_000227928.1;Parent=gene-SO06_RS09760;Dbxref=GenBank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=SO06_RS09760;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 175282 175449 . - . ID=gene-SO06_RS09765;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=SO06_RS09765 NZ_MYDG01000005.1 Protein Homology CDS 175282 175449 . - 0 ID=cds-WP_001537784.1;Parent=gene-SO06_RS09765;Dbxref=GenBank:WP_001537784.1;Name=WP_001537784.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=SO06_RS09765;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 175705 176268 . - . ID=gene-SO06_RS09770;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=SO06_RS09770 NZ_MYDG01000005.1 Protein Homology CDS 175705 176268 . - 0 ID=cds-WP_000759136.1;Parent=gene-SO06_RS09770;Dbxref=GenBank:WP_000759136.1;Name=WP_000759136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=SO06_RS09770;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759136.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 176265 177905 . - . ID=gene-SO06_RS09775;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=SO06_RS09775 NZ_MYDG01000005.1 Protein Homology CDS 176265 177905 . - 0 ID=cds-WP_000433414.1;Parent=gene-SO06_RS09775;Dbxref=GenBank:WP_000433414.1;Name=WP_000433414.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=SO06_RS09775;product=intermembrane transport protein PqiB;protein_id=WP_000433414.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 177910 179163 . - . ID=gene-SO06_RS09780;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=SO06_RS09780 NZ_MYDG01000005.1 Protein Homology CDS 177910 179163 . - 0 ID=cds-WP_000333153.1;Parent=gene-SO06_RS09780;Dbxref=GenBank:WP_000333153.1;Name=WP_000333153.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=SO06_RS09780;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333153.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 179178 181085 . - . ID=gene-SO06_RS09785;Name=SO06_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09785 NZ_MYDG01000005.1 Protein Homology CDS 179178 181085 . - 0 ID=cds-WP_000053044.1;Parent=gene-SO06_RS09785;Dbxref=GenBank:WP_000053044.1;Name=WP_000053044.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=SO06_RS09785;product=ABC transporter ATP-binding protein;protein_id=WP_000053044.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 181098 183206 . - . ID=gene-SO06_RS09790;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=SO06_RS09790 NZ_MYDG01000005.1 Protein Homology CDS 181098 183206 . - 0 ID=cds-WP_001086485.1;Parent=gene-SO06_RS09790;Dbxref=GenBank:WP_001086485.1;Name=WP_001086485.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=SO06_RS09790;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086485.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 183305 184414 . + . ID=gene-SO06_RS09795;Name=SO06_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09795 NZ_MYDG01000005.1 Protein Homology CDS 183305 184414 . + 0 ID=cds-WP_045340691.1;Parent=gene-SO06_RS09795;Dbxref=GenBank:WP_045340691.1;Name=WP_045340691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=SO06_RS09795;product=YcbX family protein;protein_id=WP_045340691.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 184411 184953 . - . ID=gene-SO06_RS09800;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=SO06_RS09800 NZ_MYDG01000005.1 Protein Homology CDS 184411 184953 . - 0 ID=cds-WP_001220671.1;Parent=gene-SO06_RS09800;Dbxref=GenBank:WP_001220671.1;Name=WP_001220671.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=SO06_RS09800;product=cell division protein ZapC;protein_id=WP_001220671.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 185119 186129 . - . ID=gene-SO06_RS09805;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=SO06_RS09805 NZ_MYDG01000005.1 Protein Homology CDS 185119 186129 . - 0 ID=cds-WP_000291723.1;Parent=gene-SO06_RS09805;Dbxref=GenBank:WP_000291723.1;Name=WP_000291723.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=SO06_RS09805;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_000291723.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 186337 188949 . - . ID=gene-SO06_RS09810;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=SO06_RS09810 NZ_MYDG01000005.1 Protein Homology CDS 186337 188949 . - 0 ID=cds-WP_048348814.1;Parent=gene-SO06_RS09810;Dbxref=GenBank:WP_048348814.1;Name=WP_048348814.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=SO06_RS09810;product=aminopeptidase N;protein_id=WP_048348814.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 189216 190418 . + . ID=gene-SO06_RS09815;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=SO06_RS09815 NZ_MYDG01000005.1 Protein Homology CDS 189216 190418 . + 0 ID=cds-WP_023232662.1;Parent=gene-SO06_RS09815;Dbxref=GenBank:WP_023232662.1;Name=WP_023232662.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=SO06_RS09815;product=nicotinate phosphoribosyltransferase;protein_id=WP_023232662.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 190499 191932 . - . ID=gene-SO06_RS09820;Name=SO06_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09820 NZ_MYDG01000005.1 Protein Homology CDS 190499 191932 . - 0 ID=cds-WP_048348815.1;Parent=gene-SO06_RS09820;Dbxref=GenBank:WP_048348815.1;Name=WP_048348815.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524705.1;locus_tag=SO06_RS09820;product=alanine/glycine:cation symporter family protein;protein_id=WP_048348815.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 192178 193392 . - . ID=gene-SO06_RS09825;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=SO06_RS09825 NZ_MYDG01000005.1 Protein Homology CDS 192178 193392 . - 0 ID=cds-WP_000544858.1;Parent=gene-SO06_RS09825;Dbxref=GenBank:WP_000544858.1;Name=WP_000544858.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=SO06_RS09825;product=diaminopropionate ammonia-lyase;protein_id=WP_000544858.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 193710 194171 . + . ID=gene-SO06_RS09835;Name=SO06_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09835 NZ_MYDG01000005.1 Protein Homology CDS 193710 194171 . + 0 ID=cds-WP_023232659.1;Parent=gene-SO06_RS09835;Dbxref=GenBank:WP_023232659.1;Name=WP_023232659.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=SO06_RS09835;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_023232659.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 194372 195772 . + . ID=gene-SO06_RS09840;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=SO06_RS09840 NZ_MYDG01000005.1 Protein Homology CDS 194372 195772 . + 0 ID=cds-WP_000117867.1;Parent=gene-SO06_RS09840;Dbxref=GenBank:WP_000117867.1;Name=WP_000117867.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=SO06_RS09840;product=asparagine--tRNA ligase;protein_id=WP_000117867.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 196379 197470 . + . ID=gene-SO06_RS09845;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=SO06_RS09845 NZ_MYDG01000005.1 Protein Homology CDS 196379 197470 . + 0 ID=cds-WP_000977709.1;Parent=gene-SO06_RS09845;Dbxref=GenBank:WP_000977709.1;Name=WP_000977709.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=SO06_RS09845;product=porin OmpF;protein_id=WP_000977709.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 197655 198845 . + . ID=gene-SO06_RS09850;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=SO06_RS09850 NZ_MYDG01000005.1 Protein Homology CDS 197655 198845 . + 0 ID=cds-WP_000462653.1;Parent=gene-SO06_RS09850;Dbxref=GenBank:WP_000462653.1;Name=WP_000462653.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=SO06_RS09850;product=aspartate transaminase;protein_id=WP_000462653.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 198907 199554 . - . ID=gene-SO06_RS09855;Name=SO06_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09855 NZ_MYDG01000005.1 Protein Homology CDS 198907 199554 . - 0 ID=cds-WP_001109471.1;Parent=gene-SO06_RS09855;Dbxref=GenBank:WP_001109471.1;Name=WP_001109471.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=SO06_RS09855;product=MBL fold metallo-hydrolase;protein_id=WP_001109471.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 199582 200130 . - . ID=gene-SO06_RS09860;Name=SO06_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09860 NZ_MYDG01000005.1 Protein Homology CDS 199582 200130 . - 0 ID=cds-WP_000357052.1;Parent=gene-SO06_RS09860;Dbxref=GenBank:WP_000357052.1;Name=WP_000357052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=SO06_RS09860;product=YcbK family protein;protein_id=WP_000357052.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 200390 202237 . - . ID=gene-SO06_RS09870;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=SO06_RS09870 NZ_MYDG01000005.1 Protein Homology CDS 200390 202237 . - 0 ID=cds-WP_023204241.1;Parent=gene-SO06_RS09870;Dbxref=GenBank:WP_023204241.1;Name=WP_023204241.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=SO06_RS09870;product=L%2CD-transpeptidase;protein_id=WP_023204241.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 202582 207048 . - . ID=gene-SO06_RS09875;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=SO06_RS09875 NZ_MYDG01000005.1 Protein Homology CDS 202582 207048 . - 0 ID=cds-WP_023231942.1;Parent=gene-SO06_RS09875;Dbxref=GenBank:WP_023231942.1;Name=WP_023231942.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=SO06_RS09875;product=chromosome partition protein MukB;protein_id=WP_023231942.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 207048 207752 . - . ID=gene-SO06_RS09880;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=SO06_RS09880 NZ_MYDG01000005.1 Protein Homology CDS 207048 207752 . - 0 ID=cds-WP_000060024.1;Parent=gene-SO06_RS09880;Dbxref=GenBank:WP_000060024.1;Name=WP_000060024.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=SO06_RS09880;product=chromosome partition protein MukE;protein_id=WP_000060024.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 207733 209055 . - . ID=gene-SO06_RS09885;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=SO06_RS09885 NZ_MYDG01000005.1 Protein Homology CDS 207733 209055 . - 0 ID=cds-WP_001288828.1;Parent=gene-SO06_RS09885;Dbxref=GenBank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=SO06_RS09885;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 209048 209851 . - . ID=gene-SO06_RS09890;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=SO06_RS09890 NZ_MYDG01000005.1 Protein Homology CDS 209048 209851 . - 0 ID=cds-WP_001154025.1;Parent=gene-SO06_RS09890;Dbxref=GenBank:WP_001154025.1;Name=WP_001154025.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=SO06_RS09890;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001154025.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 209987 210763 . + . ID=gene-SO06_RS09895;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=SO06_RS09895 NZ_MYDG01000005.1 Protein Homology CDS 209987 210763 . + 0 ID=cds-WP_023231944.1;Parent=gene-SO06_RS09895;Dbxref=GenBank:WP_023231944.1;Name=WP_023231944.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=SO06_RS09895;product=envelope biogenesis factor ElyC;protein_id=WP_023231944.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 210743 211636 . - . ID=gene-SO06_RS09900;Name=SO06_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09900 NZ_MYDG01000005.1 Protein Homology CDS 210743 211636 . - 0 ID=cds-WP_000436894.1;Parent=gene-SO06_RS09900;Dbxref=GenBank:WP_000436894.1;Name=WP_000436894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=SO06_RS09900;product=YcbJ family phosphotransferase;protein_id=WP_000436894.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 211847 212593 . - . ID=gene-SO06_RS09905;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=SO06_RS09905 NZ_MYDG01000005.1 Protein Homology CDS 211847 212593 . - 0 ID=cds-WP_000011576.1;Parent=gene-SO06_RS09905;Dbxref=GenBank:WP_000011576.1;Name=WP_000011576.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=SO06_RS09905;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011576.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 212590 212772 . - . ID=gene-SO06_RS09910;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=SO06_RS09910 NZ_MYDG01000005.1 Protein Homology CDS 212590 212772 . - 0 ID=cds-WP_000350061.1;Parent=gene-SO06_RS09910;Dbxref=GenBank:WP_000350061.1;Name=WP_000350061.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=SO06_RS09910;product=protein YcaR;protein_id=WP_000350061.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 212824 214056 . - . ID=gene-SO06_RS09915;Name=SO06_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09915 NZ_MYDG01000005.1 Protein Homology CDS 212824 214056 . - 0 ID=cds-WP_023231945.1;Parent=gene-SO06_RS09915;Dbxref=GenBank:WP_023231945.1;Name=WP_023231945.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=SO06_RS09915;product=winged helix-turn-helix domain-containing protein;protein_id=WP_023231945.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 214100 215077 . - . ID=gene-SO06_RS09920;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=SO06_RS09920 NZ_MYDG01000005.1 Protein Homology CDS 214100 215077 . - 0 ID=cds-WP_023231946.1;Parent=gene-SO06_RS09920;Dbxref=GenBank:WP_023231946.1;Name=WP_023231946.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=SO06_RS09920;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_023231946.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 215074 216822 . - . ID=gene-SO06_RS09925;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=SO06_RS09925 NZ_MYDG01000005.1 Protein Homology CDS 215074 216822 . - 0 ID=cds-WP_000551246.1;Parent=gene-SO06_RS09925;Dbxref=GenBank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=SO06_RS09925;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 216859 219123 . - . ID=gene-SO06_RS09930;Name=SO06_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09930 NZ_MYDG01000005.1 Protein Homology CDS 216859 219123 . - 0 ID=cds-WP_017440917.1;Parent=gene-SO06_RS09930;Dbxref=GenBank:WP_017440917.1;Name=WP_017440917.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=SO06_RS09930;product=ComEC family protein;protein_id=WP_017440917.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 219353 219637 . - . ID=gene-SO06_RS09935;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=SO06_RS09935 NZ_MYDG01000005.1 Protein Homology CDS 219353 219637 . - 0 ID=cds-WP_000167332.1;Parent=gene-SO06_RS09935;Dbxref=GenBank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=SO06_RS09935;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 219793 221466 . - . ID=gene-SO06_RS09940;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=SO06_RS09940 NZ_MYDG01000005.1 Protein Homology CDS 219793 221466 . - 0 ID=cds-WP_000140324.1;Parent=gene-SO06_RS09940;Dbxref=GenBank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=SO06_RS09940;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 221580 222263 . - . ID=gene-SO06_RS09945;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=SO06_RS09945 NZ_MYDG01000005.1 Protein Homology CDS 221580 222263 . - 0 ID=cds-WP_000125007.1;Parent=gene-SO06_RS09945;Dbxref=GenBank:WP_000125007.1;Name=WP_000125007.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=SO06_RS09945;product=(d)CMP kinase;protein_id=WP_000125007.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 222436 223197 . - . ID=gene-SO06_RS09950;Name=SO06_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09950 NZ_MYDG01000005.1 Protein Homology CDS 222436 223197 . - 0 ID=cds-WP_000792301.1;Parent=gene-SO06_RS09950;Dbxref=GenBank:WP_000792301.1;Name=WP_000792301.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=SO06_RS09950;product=M48 family metallopeptidase;protein_id=WP_000792301.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 223340 224623 . - . ID=gene-SO06_RS09955;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=SO06_RS09955 NZ_MYDG01000005.1 Protein Homology CDS 223340 224623 . - 0 ID=cds-WP_001528800.1;Parent=gene-SO06_RS09955;Dbxref=GenBank:WP_001528800.1;Name=WP_001528800.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=SO06_RS09955;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_001528800.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 224694 225782 . - . ID=gene-SO06_RS09960;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=SO06_RS09960 NZ_MYDG01000005.1 Protein Homology CDS 224694 225782 . - 0 ID=cds-WP_000079590.1;Parent=gene-SO06_RS09960;Dbxref=GenBank:WP_000079590.1;Name=WP_000079590.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=SO06_RS09960;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000079590.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 225968 226660 . - . ID=gene-SO06_RS09965;Name=SO06_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS09965 NZ_MYDG01000005.1 Protein Homology CDS 225968 226660 . - 0 ID=cds-WP_000642866.1;Parent=gene-SO06_RS09965;Dbxref=GenBank:WP_000642866.1;Name=WP_000642866.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=SO06_RS09965;product=DUF421 domain-containing protein;protein_id=WP_000642866.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 226797 228557 . + . ID=gene-SO06_RS09970;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=SO06_RS09970 NZ_MYDG01000005.1 Protein Homology CDS 226797 228557 . + 0 ID=cds-WP_001747674.1;Parent=gene-SO06_RS09970;Dbxref=GenBank:WP_001747674.1;Name=WP_001747674.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=SO06_RS09970;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_001747674.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 228962 229819 . + . ID=gene-SO06_RS09975;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=SO06_RS09975 NZ_MYDG01000005.1 Protein Homology CDS 228962 229819 . + 0 ID=cds-WP_000642539.1;Parent=gene-SO06_RS09975;Dbxref=GenBank:WP_000642539.1;Name=WP_000642539.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=SO06_RS09975;product=formate transporter FocA;protein_id=WP_000642539.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 229879 232161 . + . ID=gene-SO06_RS09980;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=SO06_RS09980 NZ_MYDG01000005.1 Protein Homology CDS 229879 232161 . + 0 ID=cds-WP_001292799.1;Parent=gene-SO06_RS09980;Dbxref=GenBank:WP_001292799.1;Name=WP_001292799.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=SO06_RS09980;product=formate C-acetyltransferase;protein_id=WP_001292799.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 232234 233193 . - . ID=gene-SO06_RS09985;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=SO06_RS09985 NZ_MYDG01000005.1 Protein Homology CDS 232234 233193 . - 0 ID=cds-WP_048348816.1;Parent=gene-SO06_RS09985;Dbxref=GenBank:WP_048348816.1;Name=WP_048348816.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=SO06_RS09985;product=type III secretion system effector SopD2;protein_id=WP_048348816.1;transl_table=11 NZ_MYDG01000005.1 RefSeq pseudogene 233324 233649 . + . ID=gene-SO06_RS25535;Name=SO06_RS25535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25535;pseudo=true NZ_MYDG01000005.1 Protein Homology CDS 233324 233649 . + 0 ID=cds-SO06_RS25535;Parent=gene-SO06_RS25535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=SO06_RS25535;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 233768 234565 . + . ID=gene-SO06_RS09995;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=SO06_RS09995 NZ_MYDG01000005.1 Protein Homology CDS 233768 234565 . + 0 ID=cds-WP_000067928.1;Parent=gene-SO06_RS09995;Dbxref=GenBank:WP_000067928.1;Name=WP_000067928.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=SO06_RS09995;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067928.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 234857 236278 . - . ID=gene-SO06_RS10000;Name=SO06_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10000 NZ_MYDG01000005.1 Protein Homology CDS 234857 236278 . - 0 ID=cds-WP_001134264.1;Parent=gene-SO06_RS10000;Dbxref=GenBank:WP_001134264.1;Name=WP_001134264.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=SO06_RS10000;product=APC family permease;protein_id=WP_001134264.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 236496 237644 . - . ID=gene-SO06_RS10005;Name=SO06_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10005 NZ_MYDG01000005.1 Protein Homology CDS 236496 237644 . - 0 ID=cds-WP_000109274.1;Parent=gene-SO06_RS10005;Dbxref=GenBank:WP_000109274.1;Name=WP_000109274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=SO06_RS10005;product=MFS transporter;protein_id=WP_000109274.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 237994 238857 . - . ID=gene-SO06_RS10010;Name=SO06_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10010 NZ_MYDG01000005.1 Protein Homology CDS 237994 238857 . - 0 ID=cds-WP_000534681.1;Parent=gene-SO06_RS10010;Dbxref=GenBank:WP_000534681.1;Name=WP_000534681.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=SO06_RS10010;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534681.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 238859 239476 . - . ID=gene-SO06_RS10015;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=SO06_RS10015 NZ_MYDG01000005.1 Protein Homology CDS 238859 239476 . - 0 ID=cds-WP_000213073.1;Parent=gene-SO06_RS10015;Dbxref=GenBank:WP_000213073.1;Name=WP_000213073.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=SO06_RS10015;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213073.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 239487 241931 . - . ID=gene-SO06_RS10020;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=SO06_RS10020 NZ_MYDG01000005.1 Protein Homology CDS 239487 241931 . - 0 ID=cds-WP_000850250.1;Parent=gene-SO06_RS10020;Dbxref=GenBank:WP_000850250.1;Name=WP_000850250.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=SO06_RS10020;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850250.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 242169 243461 . - . ID=gene-SO06_RS10025;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=SO06_RS10025 NZ_MYDG01000005.1 Protein Homology CDS 242169 243461 . - 0 ID=cds-WP_000886697.1;Parent=gene-SO06_RS10025;Dbxref=GenBank:WP_000886697.1;Name=WP_000886697.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=SO06_RS10025;product=serine--tRNA ligase;protein_id=WP_000886697.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 243720 245063 . - . ID=gene-SO06_RS10030;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=SO06_RS10030 NZ_MYDG01000005.1 Protein Homology CDS 243720 245063 . - 0 ID=cds-WP_023232101.1;Parent=gene-SO06_RS10030;Dbxref=GenBank:WP_023232101.1;Name=WP_023232101.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=SO06_RS10030;product=replication-associated recombination protein RarA;protein_id=WP_023232101.1;transl_table=11 NZ_MYDG01000005.1 RefSeq gene 245073 245684 . - . ID=gene-SO06_RS10035;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=SO06_RS10035 NZ_MYDG01000005.1 Protein Homology CDS 245073 245684 . - 0 ID=cds-WP_001519746.1;Parent=gene-SO06_RS10035;Dbxref=GenBank:WP_001519746.1;Name=WP_001519746.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=SO06_RS10035;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001519746.1;transl_table=11 NZ_MYDG01000005.1 RefSeq pseudogene 245827 247537 . - . ID=gene-SO06_RS10040;Name=ftsK;end_range=247537,.;gbkey=Gene;gene=ftsK;gene_biotype=pseudogene;locus_tag=SO06_RS10040;partial=true;pseudo=true NZ_MYDG01000005.1 Protein Homology CDS 245827 247537 . - 1 ID=cds-SO06_RS10040;Parent=gene-SO06_RS10040;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=247537,.;gbkey=CDS;gene=ftsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=SO06_RS10040;partial=true;product=DNA translocase FtsK;pseudo=true;transl_table=11 ##sequence-region NZ_MYDG01000060.1 1 468 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000060.1 RefSeq region 1 468 . + . ID=NZ_MYDG01000060.1:1..468;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000060.1 RefSeq gene 1 468 . - . ID=gene-SO06_RS24780;Name=SO06_RS24780;end_range=468,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24780;partial=true;start_range=.,1 NZ_MYDG01000060.1 Protein Homology CDS 1 468 . - 2 ID=cds-WP_303245755.1;Parent=gene-SO06_RS24780;Dbxref=GenBank:WP_303245755.1;Name=WP_303245755.1;end_range=468,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=SO06_RS24780;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_303245755.1;start_range=.,1;transl_table=11 ##sequence-region NZ_MYDG01000061.1 1 395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000061.1 RefSeq region 1 395 . + . ID=NZ_MYDG01000061.1:1..395;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000061.1 RefSeq gene 1 395 . - . ID=gene-SO06_RS24785;Name=SO06_RS24785;end_range=395,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24785;partial=true;start_range=.,1 NZ_MYDG01000061.1 Protein Homology CDS 1 395 . - 0 ID=cds-WP_139783752.1;Parent=gene-SO06_RS24785;Dbxref=GenBank:WP_139783752.1;Name=WP_139783752.1;Ontology_term=GO:0006814,GO:0016829;end_range=395,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459747.1;locus_tag=SO06_RS24785;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_139783752.1;start_range=.,1;transl_table=11 ##sequence-region NZ_MYDG01000062.1 1 373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000062.1 RefSeq region 1 373 . + . ID=NZ_MYDG01000062.1:1..373;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000062.1 RefSeq pseudogene 1 373 . + . ID=gene-SO06_RS24790;Name=SO06_RS24790;end_range=373,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS24790;partial=true;pseudo=true;start_range=.,1 NZ_MYDG01000062.1 Protein Homology CDS 1 373 . + 2 ID=cds-SO06_RS24790;Parent=gene-SO06_RS24790;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=373,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=SO06_RS24790;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_MYDG01000063.1 1 322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000063.1 RefSeq region 1 322 . + . ID=NZ_MYDG01000063.1:1..322;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000063.1 RefSeq gene 109 184 . + . ID=gene-SO06_RS24795;Name=SO06_RS24795;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24795 NZ_MYDG01000063.1 tRNAscan-SE tRNA 109 184 . + . ID=rna-SO06_RS24795;Parent=gene-SO06_RS24795;anticodon=(pos:143..145);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24795;product=tRNA-Glu NZ_MYDG01000063.1 tRNAscan-SE exon 109 184 . + . ID=exon-SO06_RS24795-1;Parent=rna-SO06_RS24795;anticodon=(pos:143..145);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24795;product=tRNA-Glu ##sequence-region NZ_MYDG01000064.1 1 321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000064.1 RefSeq region 1 321 . + . ID=NZ_MYDG01000064.1:1..321;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000064.1 RefSeq gene 2 88 . - . ID=gene-SO06_RS24800;Name=SO06_RS24800;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24800 NZ_MYDG01000064.1 tRNAscan-SE tRNA 2 88 . - . ID=rna-SO06_RS24800;Parent=gene-SO06_RS24800;anticodon=(pos:complement(52..54));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24800;product=tRNA-Leu NZ_MYDG01000064.1 tRNAscan-SE exon 2 88 . - . ID=exon-SO06_RS24800-1;Parent=rna-SO06_RS24800;anticodon=(pos:complement(52..54));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24800;product=tRNA-Leu NZ_MYDG01000064.1 RefSeq gene 120 206 . - . ID=gene-SO06_RS24805;Name=SO06_RS24805;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24805 NZ_MYDG01000064.1 tRNAscan-SE tRNA 120 206 . - . ID=rna-SO06_RS24805;Parent=gene-SO06_RS24805;anticodon=(pos:complement(170..172));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24805;product=tRNA-Leu NZ_MYDG01000064.1 tRNAscan-SE exon 120 206 . - . ID=exon-SO06_RS24805-1;Parent=rna-SO06_RS24805;anticodon=(pos:complement(170..172));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24805;product=tRNA-Leu NZ_MYDG01000064.1 RefSeq gene 234 320 . - . ID=gene-SO06_RS24810;Name=SO06_RS24810;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24810 NZ_MYDG01000064.1 tRNAscan-SE tRNA 234 320 . - . ID=rna-SO06_RS24810;Parent=gene-SO06_RS24810;anticodon=(pos:complement(284..286));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24810;product=tRNA-Leu NZ_MYDG01000064.1 tRNAscan-SE exon 234 320 . - . ID=exon-SO06_RS24810-1;Parent=rna-SO06_RS24810;anticodon=(pos:complement(284..286));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24810;product=tRNA-Leu ##sequence-region NZ_MYDG01000065.1 1 310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000065.1 RefSeq region 1 310 . + . ID=NZ_MYDG01000065.1:1..310;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000065.1 RefSeq gene 2 77 . - . ID=gene-SO06_RS24815;Name=SO06_RS24815;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24815 NZ_MYDG01000065.1 tRNAscan-SE tRNA 2 77 . - . ID=rna-SO06_RS24815;Parent=gene-SO06_RS24815;anticodon=(pos:complement(42..44));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24815;product=tRNA-Gly NZ_MYDG01000065.1 tRNAscan-SE exon 2 77 . - . ID=exon-SO06_RS24815-1;Parent=rna-SO06_RS24815;anticodon=(pos:complement(42..44));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24815;product=tRNA-Gly NZ_MYDG01000065.1 RefSeq gene 234 309 . - . ID=gene-SO06_RS24820;Name=SO06_RS24820;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24820 NZ_MYDG01000065.1 tRNAscan-SE tRNA 234 309 . - . ID=rna-SO06_RS24820;Parent=gene-SO06_RS24820;anticodon=(pos:complement(274..276));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24820;product=tRNA-Gly NZ_MYDG01000065.1 tRNAscan-SE exon 234 309 . - . ID=exon-SO06_RS24820-1;Parent=rna-SO06_RS24820;anticodon=(pos:complement(274..276));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24820;product=tRNA-Gly ##sequence-region NZ_MYDG01000066.1 1 306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000066.1 RefSeq region 1 306 . + . ID=NZ_MYDG01000066.1:1..306;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000066.1 RefSeq gene 1 306 . - . ID=gene-SO06_RS24825;Name=SO06_RS24825;end_range=306,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24825;partial=true;start_range=.,1 NZ_MYDG01000066.1 Protein Homology CDS 1 306 . - 2 ID=cds-WP_139783753.1;Parent=gene-SO06_RS24825;Dbxref=GenBank:WP_139783753.1;Name=WP_139783753.1;end_range=306,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=SO06_RS24825;partial=true;product=Ig-like domain-containing protein;protein_id=WP_139783753.1;start_range=.,1;transl_table=11 ##sequence-region NZ_MYDG01000067.1 1 281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000067.1 RefSeq region 1 281 . + . ID=NZ_MYDG01000067.1:1..281;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000067.1 RefSeq pseudogene 1 281 . - . ID=gene-SO06_RS24830;Name=lsoA;end_range=281,.;gbkey=Gene;gene=lsoA;gene_biotype=pseudogene;locus_tag=SO06_RS24830;partial=true;pseudo=true;start_range=.,1 NZ_MYDG01000067.1 Protein Homology CDS 1 281 . - 0 ID=cds-SO06_RS24830;Parent=gene-SO06_RS24830;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=281,.;gbkey=CDS;gene=lsoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052606.1;locus_tag=SO06_RS24830;partial=true;product=type II toxin-antitoxin system mRNA endoribonuclease LsoA;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_MYDG01000068.1 1 276 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000068.1 RefSeq region 1 276 . + . ID=NZ_MYDG01000068.1:1..276;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000068.1 RefSeq gene 1 276 . - . ID=gene-SO06_RS24835;Name=SO06_RS24835;end_range=276,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=SO06_RS24835;partial=true;start_range=.,1 NZ_MYDG01000068.1 cmsearch rRNA 1 276 . - . ID=rna-SO06_RS24835;Parent=gene-SO06_RS24835;Dbxref=RFAM:RF02541;end_range=276,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24835;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_MYDG01000068.1 cmsearch exon 1 276 . - . ID=exon-SO06_RS24835-1;Parent=rna-SO06_RS24835;Dbxref=RFAM:RF02541;end_range=276,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24835;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_MYDG01000069.1 1 270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000069.1 RefSeq region 1 270 . + . ID=NZ_MYDG01000069.1:1..270;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000069.1 RefSeq gene 213 270 . + . ID=gene-SO06_RS24840;Name=SO06_RS24840;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS24840 NZ_MYDG01000069.1 tRNAscan-SE tRNA 213 270 . + . ID=rna-SO06_RS24840;Parent=gene-SO06_RS24840;anticodon=(pos:238..240);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24840;product=tRNA-Lys NZ_MYDG01000069.1 tRNAscan-SE exon 213 270 . + . ID=exon-SO06_RS24840-1;Parent=rna-SO06_RS24840;anticodon=(pos:238..240);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS24840;product=tRNA-Lys ##sequence-region NZ_MYDG01000006.1 1 239131 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000006.1 RefSeq region 1 239131 . + . ID=NZ_MYDG01000006.1:1..239131;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000006.1 RefSeq gene 148 1374 . + . ID=gene-SO06_RS10045;Name=SO06_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10045 NZ_MYDG01000006.1 Protein Homology CDS 148 1374 . + 0 ID=cds-WP_023231605.1;Parent=gene-SO06_RS10045;Dbxref=GenBank:WP_023231605.1;Name=WP_023231605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=SO06_RS10045;product=DUF3748 domain-containing protein;protein_id=WP_023231605.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 1376 1708 . - . ID=gene-SO06_RS10050;Name=SO06_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10050 NZ_MYDG01000006.1 Protein Homology CDS 1376 1708 . - 0 ID=cds-WP_001581211.1;Parent=gene-SO06_RS10050;Dbxref=GenBank:WP_001581211.1;Name=WP_001581211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=SO06_RS10050;product=YceK/YidQ family lipoprotein;protein_id=WP_001581211.1;transl_table=11 NZ_MYDG01000006.1 cmsearch sequence_feature 1951 2024 . + . ID=id-NZ_MYDG01000006.1:1951..2024;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_MYDG01000006.1 RefSeq gene 2018 2431 . + . ID=gene-SO06_RS10055;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=SO06_RS10055 NZ_MYDG01000006.1 Protein Homology CDS 2018 2431 . + 0 ID=cds-WP_001532742.1;Parent=gene-SO06_RS10055;Dbxref=GenBank:WP_001532742.1;Name=WP_001532742.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=SO06_RS10055;product=small heat shock chaperone IbpA;protein_id=WP_001532742.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 2541 2969 . + . ID=gene-SO06_RS10060;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=SO06_RS10060 NZ_MYDG01000006.1 Protein Homology CDS 2541 2969 . + 0 ID=cds-WP_001246919.1;Parent=gene-SO06_RS10060;Dbxref=GenBank:WP_001246919.1;Name=WP_001246919.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=SO06_RS10060;product=small heat shock chaperone IbpB;protein_id=WP_001246919.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 3163 4824 . + . ID=gene-SO06_RS10065;Name=SO06_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10065 NZ_MYDG01000006.1 Protein Homology CDS 3163 4824 . + 0 ID=cds-WP_001279793.1;Parent=gene-SO06_RS10065;Dbxref=GenBank:WP_001279793.1;Name=WP_001279793.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=SO06_RS10065;product=putative transporter;protein_id=WP_001279793.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 5268 5615 . + . ID=gene-SO06_RS10070;Name=SO06_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10070 NZ_MYDG01000006.1 Protein Homology CDS 5268 5615 . + 0 ID=cds-WP_000703964.1;Parent=gene-SO06_RS10070;Dbxref=GenBank:WP_000703964.1;Name=WP_000703964.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=SO06_RS10070;product=YidH family protein;protein_id=WP_000703964.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 5605 5967 . + . ID=gene-SO06_RS10075;Name=SO06_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10075 NZ_MYDG01000006.1 Protein Homology CDS 5605 5967 . + 0 ID=cds-WP_001113454.1;Parent=gene-SO06_RS10075;Dbxref=GenBank:WP_001113454.1;Name=WP_001113454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=SO06_RS10075;product=DUF202 domain-containing protein;protein_id=WP_001113454.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 5964 6494 . + . ID=gene-SO06_RS10080;Name=SO06_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10080 NZ_MYDG01000006.1 Protein Homology CDS 5964 6494 . + 0 ID=cds-WP_000147833.1;Parent=gene-SO06_RS10080;Dbxref=GenBank:WP_000147833.1;Name=WP_000147833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=SO06_RS10080;product=radical SAM protein;protein_id=WP_000147833.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 6576 7898 . - . ID=gene-SO06_RS10085;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=SO06_RS10085 NZ_MYDG01000006.1 Protein Homology CDS 6576 7898 . - 0 ID=cds-WP_023231603.1;Parent=gene-SO06_RS10085;Dbxref=GenBank:WP_023231603.1;Name=WP_023231603.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=SO06_RS10085;product=D-serine ammonia-lyase;protein_id=WP_023231603.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 7916 9253 . - . ID=gene-SO06_RS10090;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=SO06_RS10090 NZ_MYDG01000006.1 Protein Homology CDS 7916 9253 . - 0 ID=cds-WP_000543317.1;Parent=gene-SO06_RS10090;Dbxref=GenBank:WP_000543317.1;Name=WP_000543317.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=SO06_RS10090;product=D-serine transporter DsdX;protein_id=WP_000543317.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 9479 10402 . + . ID=gene-SO06_RS10095;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=SO06_RS10095 NZ_MYDG01000006.1 Protein Homology CDS 9479 10402 . + 0 ID=cds-WP_001541637.1;Parent=gene-SO06_RS10095;Dbxref=GenBank:WP_001541637.1;Name=WP_001541637.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=SO06_RS10095;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_001541637.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 10466 11551 . + . ID=gene-SO06_RS10100;Name=SO06_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10100 NZ_MYDG01000006.1 Protein Homology CDS 10466 11551 . + 0 ID=cds-WP_000238925.1;Parent=gene-SO06_RS10100;Dbxref=GenBank:WP_000238925.1;Name=WP_000238925.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=SO06_RS10100;product=cellulase family glycosylhydrolase;protein_id=WP_000238925.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 11478 12662 . - . ID=gene-SO06_RS10105;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=SO06_RS10105 NZ_MYDG01000006.1 Protein Homology CDS 11478 12662 . - 0 ID=cds-WP_000828744.1;Parent=gene-SO06_RS10105;Dbxref=GenBank:WP_000828744.1;Name=WP_000828744.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=SO06_RS10105;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828744.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 12865 13725 . - . ID=gene-SO06_RS10110;Name=SO06_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10110 NZ_MYDG01000006.1 Protein Homology CDS 12865 13725 . - 0 ID=cds-WP_001531658.1;Parent=gene-SO06_RS10110;Dbxref=GenBank:WP_001531658.1;Name=WP_001531658.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=SO06_RS10110;product=DMT family transporter;protein_id=WP_001531658.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 13818 13907 . - . ID=gene-SO06_RS10115;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=SO06_RS10115 NZ_MYDG01000006.1 Protein Homology CDS 13818 13907 . - 0 ID=cds-WP_000117642.1;Parent=gene-SO06_RS10115;Dbxref=GenBank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=SO06_RS10115;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11 NZ_MYDG01000006.1 RefSeq pseudogene 13904 14018 . - . ID=gene-SO06_RS25005;Name=SO06_RS25005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25005;pseudo=true NZ_MYDG01000006.1 Protein Homology CDS 13904 14018 . - 0 ID=cds-SO06_RS25005;Parent=gene-SO06_RS25005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=SO06_RS25005;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 14541 14639 . + . ID=gene-SO06_RS10125;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=SO06_RS10125 NZ_MYDG01000006.1 Protein Homology CDS 14541 14639 . + 0 ID=cds-WP_001541152.1;Parent=gene-SO06_RS10125;Dbxref=GenBank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=SO06_RS10125;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 14746 16434 . + . ID=gene-SO06_RS10130;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=SO06_RS10130 NZ_MYDG01000006.1 Protein Homology CDS 14746 16434 . + 0 ID=cds-WP_000168439.1;Parent=gene-SO06_RS10130;Dbxref=GenBank:WP_000168439.1;Name=WP_000168439.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=SO06_RS10130;product=acetolactate synthase large subunit;protein_id=WP_000168439.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 16438 16728 . + . ID=gene-SO06_RS10135;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=SO06_RS10135 NZ_MYDG01000006.1 Protein Homology CDS 16438 16728 . + 0 ID=cds-WP_023231599.1;Parent=gene-SO06_RS10135;Dbxref=GenBank:WP_023231599.1;Name=WP_023231599.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=SO06_RS10135;product=acetolactate synthase small subunit;protein_id=WP_023231599.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 16730 17515 . - . ID=gene-SO06_RS10140;Name=SO06_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10140 NZ_MYDG01000006.1 Protein Homology CDS 16730 17515 . - 0 ID=cds-WP_000448641.1;Parent=gene-SO06_RS10140;Dbxref=GenBank:WP_000448641.1;Name=WP_000448641.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=SO06_RS10140;product=DeoR family transcriptional regulator;protein_id=WP_000448641.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 17840 18760 . + . ID=gene-SO06_RS10145;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=SO06_RS10145 NZ_MYDG01000006.1 Protein Homology CDS 17840 18760 . + 0 ID=cds-WP_000350272.1;Parent=gene-SO06_RS10145;Dbxref=GenBank:WP_000350272.1;Name=WP_000350272.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=SO06_RS10145;product=ribokinase;protein_id=WP_000350272.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 18791 20107 . + . ID=gene-SO06_RS10150;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=SO06_RS10150 NZ_MYDG01000006.1 Protein Homology CDS 18791 20107 . + 0 ID=cds-WP_000998359.1;Parent=gene-SO06_RS10150;Dbxref=GenBank:WP_000998359.1;Name=WP_000998359.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=SO06_RS10150;product=L-fucose:H+ symporter permease;protein_id=WP_000998359.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 20119 21132 . + . ID=gene-SO06_RS10155;Name=SO06_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10155 NZ_MYDG01000006.1 Protein Homology CDS 20119 21132 . + 0 ID=cds-WP_000213206.1;Parent=gene-SO06_RS10155;Dbxref=GenBank:WP_000213206.1;Name=WP_000213206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=SO06_RS10155;product=aldose 1-epimerase family protein;protein_id=WP_000213206.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 21207 21797 . + . ID=gene-SO06_RS10160;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=SO06_RS10160 NZ_MYDG01000006.1 Protein Homology CDS 21207 21797 . + 0 ID=cds-WP_000633672.1;Parent=gene-SO06_RS10160;Dbxref=GenBank:WP_000633672.1;Name=WP_000633672.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=SO06_RS10160;product=transcriptional regulator UhpA;protein_id=WP_000633672.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 21797 23299 . + . ID=gene-SO06_RS10165;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=SO06_RS10165 NZ_MYDG01000006.1 Protein Homology CDS 21797 23299 . + 0 ID=cds-WP_001091257.1;Parent=gene-SO06_RS10165;Dbxref=GenBank:WP_001091257.1;Name=WP_001091257.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=SO06_RS10165;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001091257.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 23309 24637 . + . ID=gene-SO06_RS10170;Name=SO06_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10170 NZ_MYDG01000006.1 Protein Homology CDS 23309 24637 . + 0 ID=cds-WP_000948164.1;Parent=gene-SO06_RS10170;Dbxref=GenBank:WP_000948164.1;Name=WP_000948164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=SO06_RS10170;product=MFS transporter;protein_id=WP_000948164.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 24780 26171 . + . ID=gene-SO06_RS10175;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=SO06_RS10175 NZ_MYDG01000006.1 Protein Homology CDS 24780 26171 . + 0 ID=cds-WP_000879180.1;Parent=gene-SO06_RS10175;Dbxref=GenBank:WP_000879180.1;Name=WP_000879180.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=SO06_RS10175;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879180.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 26364 26816 . + . ID=gene-SO06_RS10180;Name=SO06_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10180 NZ_MYDG01000006.1 Protein Homology CDS 26364 26816 . + 0 ID=cds-WP_023231596.1;Parent=gene-SO06_RS10180;Dbxref=GenBank:WP_023231596.1;Name=WP_023231596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=SO06_RS10180;product=DUF1198 domain-containing protein;protein_id=WP_023231596.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 27273 27596 . - . ID=gene-SO06_RS10185;Name=SO06_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10185 NZ_MYDG01000006.1 Protein Homology CDS 27273 27596 . - 0 ID=cds-WP_001274842.1;Parent=gene-SO06_RS10185;Dbxref=GenBank:WP_001274842.1;Name=WP_001274842.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=SO06_RS10185;product=helix-turn-helix domain-containing protein;protein_id=WP_001274842.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 27580 27939 . - . ID=gene-SO06_RS10190;Name=SO06_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10190 NZ_MYDG01000006.1 Protein Homology CDS 27580 27939 . - 0 ID=cds-WP_001217953.1;Parent=gene-SO06_RS10190;Dbxref=GenBank:WP_001217953.1;Name=WP_001217953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=SO06_RS10190;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001217953.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 28155 29348 . + . ID=gene-SO06_RS10195;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=SO06_RS10195 NZ_MYDG01000006.1 Protein Homology CDS 28155 29348 . + 0 ID=cds-WP_001004798.1;Parent=gene-SO06_RS10195;Dbxref=GenBank:WP_001004798.1;Name=WP_001004798.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=SO06_RS10195;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001004798.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 29408 30790 . - . ID=gene-SO06_RS10200;Name=SO06_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10200 NZ_MYDG01000006.1 Protein Homology CDS 29408 30790 . - 0 ID=cds-WP_023227863.1;Parent=gene-SO06_RS10200;Dbxref=GenBank:WP_023227863.1;Name=WP_023227863.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=SO06_RS10200;product=glycoside hydrolase family 1 protein;protein_id=WP_023227863.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 30896 31189 . - . ID=gene-SO06_RS10205;Name=SO06_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10205 NZ_MYDG01000006.1 Protein Homology CDS 30896 31189 . - 0 ID=cds-WP_000824212.1;Parent=gene-SO06_RS10205;Dbxref=GenBank:WP_000824212.1;Name=WP_000824212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=SO06_RS10205;product=YicS family protein;protein_id=WP_000824212.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 31386 34184 . + . ID=gene-SO06_RS10210;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=SO06_RS10210 NZ_MYDG01000006.1 Protein Homology CDS 31386 34184 . + 0 ID=cds-WP_001252675.1;Parent=gene-SO06_RS10210;Dbxref=GenBank:WP_001252675.1;Name=WP_001252675.1;Ontology_term=GO:0006355,GO:0009401,GO:0005524,GO:0016887;gbkey=CDS;gene=dagR;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=SO06_RS10210;product=transcriptional regulator DagR;protein_id=WP_001252675.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 34403 34828 . + . ID=gene-SO06_RS10215;Name=SO06_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10215 NZ_MYDG01000006.1 Protein Homology CDS 34403 34828 . + 0 ID=cds-WP_000214111.1;Parent=gene-SO06_RS10215;Dbxref=GenBank:WP_000214111.1;Name=WP_000214111.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=SO06_RS10215;product=PTS sugar transporter subunit IIA;protein_id=WP_000214111.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 34839 35324 . + . ID=gene-SO06_RS10220;Name=SO06_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10220 NZ_MYDG01000006.1 Protein Homology CDS 34839 35324 . + 0 ID=cds-WP_001284295.1;Parent=gene-SO06_RS10220;Dbxref=GenBank:WP_001284295.1;Name=WP_001284295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=SO06_RS10220;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_001284295.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 35470 36219 . + . ID=gene-SO06_RS10230;Name=SO06_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10230 NZ_MYDG01000006.1 Protein Homology CDS 35470 36219 . + 0 ID=cds-WP_023231594.1;Parent=gene-SO06_RS10230;Dbxref=GenBank:WP_023231594.1;Name=WP_023231594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=SO06_RS10230;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_023231594.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 36216 37076 . + . ID=gene-SO06_RS10235;Name=SO06_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10235 NZ_MYDG01000006.1 Protein Homology CDS 36216 37076 . + 0 ID=cds-WP_001526325.1;Parent=gene-SO06_RS10235;Dbxref=GenBank:WP_001526325.1;Name=WP_001526325.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=SO06_RS10235;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_001526325.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 37080 38189 . + . ID=gene-SO06_RS10240;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=SO06_RS10240 NZ_MYDG01000006.1 Protein Homology CDS 37080 38189 . + 0 ID=cds-WP_023231593.1;Parent=gene-SO06_RS10240;Dbxref=GenBank:WP_023231593.1;Name=WP_023231593.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=SO06_RS10240;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_023231593.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 38176 38919 . + . ID=gene-SO06_RS10245;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=SO06_RS10245 NZ_MYDG01000006.1 Protein Homology CDS 38176 38919 . + 0 ID=cds-WP_001186146.1;Parent=gene-SO06_RS10245;Dbxref=GenBank:WP_001186146.1;Name=WP_001186146.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=SO06_RS10245;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_001186146.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 39155 40096 . + . ID=gene-SO06_RS10250;Name=SO06_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10250 NZ_MYDG01000006.1 Protein Homology CDS 39155 40096 . + 0 ID=cds-WP_023231592.1;Parent=gene-SO06_RS10250;Dbxref=GenBank:WP_023231592.1;Name=WP_023231592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=SO06_RS10250;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_023231592.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 40139 41041 . - . ID=gene-SO06_RS10255;Name=SO06_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10255 NZ_MYDG01000006.1 Protein Homology CDS 40139 41041 . - 0 ID=cds-WP_001682335.1;Parent=gene-SO06_RS10255;Dbxref=GenBank:WP_001682335.1;Name=WP_001682335.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=SO06_RS10255;product=EamA family transporter;protein_id=WP_001682335.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 41547 42242 . + . ID=gene-SO06_RS10260;Name=SO06_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10260 NZ_MYDG01000006.1 Protein Homology CDS 41547 42242 . + 0 ID=cds-WP_000392699.1;Parent=gene-SO06_RS10260;Dbxref=GenBank:WP_000392699.1;Name=WP_000392699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=SO06_RS10260;product=MgtC family protein;protein_id=WP_000392699.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 42462 45188 . + . ID=gene-SO06_RS10265;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=SO06_RS10265 NZ_MYDG01000006.1 Protein Homology CDS 42462 45188 . + 0 ID=cds-WP_023205353.1;Parent=gene-SO06_RS10265;Dbxref=GenBank:WP_023205353.1;Name=WP_023205353.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=SO06_RS10265;product=magnesium-translocating P-type ATPase;protein_id=WP_023205353.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 45210 45302 . + . ID=gene-SO06_RS25010;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=SO06_RS25010 NZ_MYDG01000006.1 Protein Homology CDS 45210 45302 . + 0 ID=cds-WP_001082118.1;Parent=gene-SO06_RS25010;Dbxref=GenBank:WP_001082118.1;Name=WP_001082118.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082119.1;locus_tag=SO06_RS25010;product=protein MgtR;protein_id=WP_001082118.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 45315 45401 . + . ID=gene-SO06_RS25540;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=SO06_RS25540 NZ_MYDG01000006.1 Protein Homology CDS 45315 45401 . + 0 ID=cds-WP_251009859.1;Parent=gene-SO06_RS25540;Dbxref=GenBank:WP_251009859.1;Name=WP_251009859.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=SO06_RS25540;product=magnesium transporter protection protein MgtU;protein_id=WP_251009859.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 45503 45982 . + . ID=gene-SO06_RS10270;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=SO06_RS10270 NZ_MYDG01000006.1 Protein Homology CDS 45503 45982 . + 0 ID=cds-WP_023231591.1;Parent=gene-SO06_RS10270;Dbxref=GenBank:WP_023231591.1;Name=WP_023231591.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=SO06_RS10270;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_023231591.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 46211 46891 . - . ID=gene-SO06_RS10275;Name=SO06_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10275 NZ_MYDG01000006.1 Protein Homology CDS 46211 46891 . - 0 ID=cds-WP_000106461.1;Parent=gene-SO06_RS10275;Dbxref=GenBank:WP_000106461.1;Name=WP_000106461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=SO06_RS10275;product=isochorismatase family protein;protein_id=WP_000106461.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 47676 48533 . + . ID=gene-SO06_RS10285;Name=SO06_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10285 NZ_MYDG01000006.1 Protein Homology CDS 47676 48533 . + 0 ID=cds-WP_080204206.1;Parent=gene-SO06_RS10285;Dbxref=GenBank:WP_080204206.1;Name=WP_080204206.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=SO06_RS10285;product=winged helix-turn-helix domain-containing protein;protein_id=WP_080204206.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 48544 49008 . + . ID=gene-SO06_RS10290;Name=SO06_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10290 NZ_MYDG01000006.1 Protein Homology CDS 48544 49008 . + 0 ID=cds-WP_023231590.1;Parent=gene-SO06_RS10290;Dbxref=GenBank:WP_023231590.1;Name=WP_023231590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=SO06_RS10290;product=hypothetical protein;protein_id=WP_023231590.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 49103 51955 . - . ID=gene-SO06_RS10295;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=SO06_RS10295 NZ_MYDG01000006.1 Protein Homology CDS 49103 51955 . - 0 ID=cds-WP_023231589.1;Parent=gene-SO06_RS10295;Dbxref=GenBank:WP_023231589.1;Name=WP_023231589.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=SO06_RS10295;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_023231589.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 52030 52647 . - . ID=gene-SO06_RS10300;Name=SO06_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10300 NZ_MYDG01000006.1 Protein Homology CDS 52030 52647 . - 0 ID=cds-WP_000984809.1;Parent=gene-SO06_RS10300;Dbxref=GenBank:WP_000984809.1;Name=WP_000984809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=SO06_RS10300;product=helix-turn-helix transcriptional regulator;protein_id=WP_000984809.1;transl_table=11 NZ_MYDG01000006.1 RefSeq pseudogene 53404 53514 . - . ID=gene-SO06_RS25350;Name=SO06_RS25350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25350;partial=true;pseudo=true;start_range=.,53404 NZ_MYDG01000006.1 Protein Homology CDS 53404 53514 . - 0 ID=cds-SO06_RS25350;Parent=gene-SO06_RS25350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=SO06_RS25350;partial=true;product=transposase;pseudo=true;start_range=.,53404;transl_table=11 NZ_MYDG01000006.1 RefSeq pseudogene 54184 54439 . + . ID=gene-SO06_RS10305;Name=SO06_RS10305;end_range=54439,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS10305;partial=true;pseudo=true NZ_MYDG01000006.1 Protein Homology CDS 54184 54439 . + 0 ID=cds-SO06_RS10305;Parent=gene-SO06_RS10305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=54439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=SO06_RS10305;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 54829 55458 . + . ID=gene-SO06_RS10310;Name=SO06_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10310 NZ_MYDG01000006.1 Protein Homology CDS 54829 55458 . + 0 ID=cds-WP_023200971.1;Parent=gene-SO06_RS10310;Dbxref=GenBank:WP_023200971.1;Name=WP_023200971.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892400.1;locus_tag=SO06_RS10310;product=fimbrial protein;protein_id=WP_023200971.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 55602 56345 . + . ID=gene-SO06_RS10315;Name=SO06_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10315 NZ_MYDG01000006.1 Protein Homology CDS 55602 56345 . + 0 ID=cds-WP_023231585.1;Parent=gene-SO06_RS10315;Dbxref=GenBank:WP_023231585.1;Name=WP_023231585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000882257.1;locus_tag=SO06_RS10315;product=fimbrial chaperone;protein_id=WP_023231585.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 56366 58966 . + . ID=gene-SO06_RS10320;Name=SO06_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10320 NZ_MYDG01000006.1 Protein Homology CDS 56366 58966 . + 0 ID=cds-WP_023231584.1;Parent=gene-SO06_RS10320;Dbxref=GenBank:WP_023231584.1;Name=WP_023231584.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747525.1;locus_tag=SO06_RS10320;product=outer membrane usher protein;protein_id=WP_023231584.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 58980 59564 . + . ID=gene-SO06_RS10325;Name=SO06_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10325 NZ_MYDG01000006.1 Protein Homology CDS 58980 59564 . + 0 ID=cds-WP_023231583.1;Parent=gene-SO06_RS10325;Dbxref=GenBank:WP_023231583.1;Name=WP_023231583.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892398.1;locus_tag=SO06_RS10325;product=fimbrial protein;protein_id=WP_023231583.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 59579 60187 . + . ID=gene-SO06_RS10330;Name=SO06_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10330 NZ_MYDG01000006.1 Protein Homology CDS 59579 60187 . + 0 ID=cds-WP_001080417.1;Parent=gene-SO06_RS10330;Dbxref=GenBank:WP_001080417.1;Name=WP_001080417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080417.1;locus_tag=SO06_RS10330;product=fimbrial protein;protein_id=WP_001080417.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 60203 60796 . + . ID=gene-SO06_RS10335;Name=SO06_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10335 NZ_MYDG01000006.1 Protein Homology CDS 60203 60796 . + 0 ID=cds-WP_000957977.1;Parent=gene-SO06_RS10335;Dbxref=GenBank:WP_000957977.1;Name=WP_000957977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957977.1;locus_tag=SO06_RS10335;product=fimbrial-like protein;protein_id=WP_000957977.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 60820 62049 . + . ID=gene-SO06_RS10340;Name=SO06_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10340 NZ_MYDG01000006.1 Protein Homology CDS 60820 62049 . + 0 ID=cds-WP_023231582.1;Parent=gene-SO06_RS10340;Dbxref=GenBank:WP_023231582.1;Name=WP_023231582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892393.1;locus_tag=SO06_RS10340;product=fimbrial-like adhesin;protein_id=WP_023231582.1;transl_table=11 NZ_MYDG01000006.1 RefSeq pseudogene 62392 62526 . + . ID=gene-SO06_RS25545;Name=SO06_RS25545;end_range=62526,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25545;partial=true;pseudo=true NZ_MYDG01000006.1 Protein Homology CDS 62392 62526 . + 0 ID=cds-SO06_RS25545;Parent=gene-SO06_RS25545;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=62526,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104290.1;locus_tag=SO06_RS25545;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000006.1 RefSeq pseudogene 62631 62801 . - . ID=gene-SO06_RS25015;Name=SO06_RS25015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25015;partial=true;pseudo=true;start_range=.,62631 NZ_MYDG01000006.1 Protein Homology CDS 62631 62801 . - 0 ID=cds-SO06_RS25015;Parent=gene-SO06_RS25015;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611197.1;locus_tag=SO06_RS25015;partial=true;product=transposase;pseudo=true;start_range=.,62631;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 62852 63010 . - . ID=gene-SO06_RS25695;Name=SO06_RS25695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25695 NZ_MYDG01000006.1 Protein Homology CDS 62852 63010 . - 0 ID=cds-WP_342365454.1;Parent=gene-SO06_RS25695;Dbxref=GenBank:WP_342365454.1;Name=WP_342365454.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024750.6;locus_tag=SO06_RS25695;product=Arm DNA-binding domain-containing protein;protein_id=WP_342365454.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 63239 63333 . - . ID=gene-SO06_RS10350;Name=SO06_RS10350;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS10350 NZ_MYDG01000006.1 tRNAscan-SE tRNA 63239 63333 . - . ID=rna-SO06_RS10350;Parent=gene-SO06_RS10350;anticodon=(pos:complement(63297..63299));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS10350;product=tRNA-Sec NZ_MYDG01000006.1 tRNAscan-SE exon 63239 63333 . - . ID=exon-SO06_RS10350-1;Parent=rna-SO06_RS10350;anticodon=(pos:complement(63297..63299));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS10350;product=tRNA-Sec NZ_MYDG01000006.1 RefSeq gene 63621 65003 . + . ID=gene-SO06_RS10355;Name=SO06_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10355 NZ_MYDG01000006.1 Protein Homology CDS 63621 65003 . + 0 ID=cds-WP_000834256.1;Parent=gene-SO06_RS10355;Dbxref=GenBank:WP_000834256.1;Name=WP_000834256.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=SO06_RS10355;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834256.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 65015 67333 . + . ID=gene-SO06_RS10360;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=SO06_RS10360 NZ_MYDG01000006.1 Protein Homology CDS 65015 67333 . + 0 ID=cds-WP_023202903.1;Parent=gene-SO06_RS10360;Dbxref=GenBank:WP_023202903.1;Name=WP_023202903.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=SO06_RS10360;product=alpha-xylosidase;protein_id=WP_023202903.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 67436 69145 . - . ID=gene-SO06_RS10365;Name=SO06_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10365 NZ_MYDG01000006.1 Protein Homology CDS 67436 69145 . - 0 ID=cds-WP_048348929.1;Parent=gene-SO06_RS10365;Dbxref=GenBank:WP_048348929.1;Name=WP_048348929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=SO06_RS10365;product=AsmA family protein;protein_id=WP_048348929.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 69266 70657 . - . ID=gene-SO06_RS10370;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=SO06_RS10370 NZ_MYDG01000006.1 Protein Homology CDS 69266 70657 . - 0 ID=cds-WP_000115428.1;Parent=gene-SO06_RS10370;Dbxref=GenBank:WP_000115428.1;Name=WP_000115428.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=SO06_RS10370;product=xanthine/proton symporter XanP;protein_id=WP_000115428.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 70885 72090 . + . ID=gene-SO06_RS10375;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=SO06_RS10375 NZ_MYDG01000006.1 Protein Homology CDS 70885 72090 . + 0 ID=cds-WP_000462249.1;Parent=gene-SO06_RS10375;Dbxref=GenBank:WP_000462249.1;Name=WP_000462249.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=SO06_RS10375;product=sodium/glutamate symporter;protein_id=WP_000462249.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 72126 74207 . - . ID=gene-SO06_RS10380;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=SO06_RS10380 NZ_MYDG01000006.1 Protein Homology CDS 72126 74207 . - 0 ID=cds-WP_000016748.1;Parent=gene-SO06_RS10380;Dbxref=GenBank:WP_000016748.1;Name=WP_000016748.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=SO06_RS10380;product=ATP-dependent DNA helicase RecG;protein_id=WP_000016748.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 74213 74902 . - . ID=gene-SO06_RS10385;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=SO06_RS10385 NZ_MYDG01000006.1 Protein Homology CDS 74213 74902 . - 0 ID=cds-WP_001068436.1;Parent=gene-SO06_RS10385;Dbxref=GenBank:WP_001068436.1;Name=WP_001068436.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=SO06_RS10385;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001068436.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 74907 77018 . - . ID=gene-SO06_RS10390;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=SO06_RS10390 NZ_MYDG01000006.1 Protein Homology CDS 74907 77018 . - 0 ID=cds-WP_000280481.1;Parent=gene-SO06_RS10390;Dbxref=GenBank:WP_000280481.1;Name=WP_000280481.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=SO06_RS10390;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280481.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 77037 77312 . - . ID=gene-SO06_RS10395;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=SO06_RS10395 NZ_MYDG01000006.1 Protein Homology CDS 77037 77312 . - 0 ID=cds-WP_000135058.1;Parent=gene-SO06_RS10395;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=SO06_RS10395;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 77367 77990 . - . ID=gene-SO06_RS10400;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=SO06_RS10400 NZ_MYDG01000006.1 Protein Homology CDS 77367 77990 . - 0 ID=cds-WP_000046966.1;Parent=gene-SO06_RS10400;Dbxref=GenBank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=SO06_RS10400;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 78247 79932 . + . ID=gene-SO06_RS10405;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=SO06_RS10405 NZ_MYDG01000006.1 Protein Homology CDS 78247 79932 . + 0 ID=cds-WP_023231683.1;Parent=gene-SO06_RS10405;Dbxref=GenBank:WP_023231683.1;Name=WP_023231683.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=SO06_RS10405;product=NAD-dependent DNA ligase LigB;protein_id=WP_023231683.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 79929 80546 . - . ID=gene-SO06_RS10410;Name=SO06_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10410 NZ_MYDG01000006.1 Protein Homology CDS 79929 80546 . - 0 ID=cds-WP_000924334.1;Parent=gene-SO06_RS10410;Dbxref=GenBank:WP_000924334.1;Name=WP_000924334.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=SO06_RS10410;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 80794 81678 . - . ID=gene-SO06_RS10415;Name=SO06_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10415 NZ_MYDG01000006.1 Protein Homology CDS 80794 81678 . - 0 ID=cds-WP_023231684.1;Parent=gene-SO06_RS10415;Dbxref=GenBank:WP_023231684.1;Name=WP_023231684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083230.1;locus_tag=SO06_RS10415;product=HARLDQ motif MBL-fold protein;protein_id=WP_023231684.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 81752 82654 . + . ID=gene-SO06_RS10420;Name=SO06_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10420 NZ_MYDG01000006.1 Protein Homology CDS 81752 82654 . + 0 ID=cds-WP_001050866.1;Parent=gene-SO06_RS10420;Dbxref=GenBank:WP_001050866.1;Name=WP_001050866.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=SO06_RS10420;product=LysR family transcriptional regulator;protein_id=WP_001050866.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 82704 83567 . - . ID=gene-SO06_RS10425;Name=SO06_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10425 NZ_MYDG01000006.1 Protein Homology CDS 82704 83567 . - 0 ID=cds-WP_000621352.1;Parent=gene-SO06_RS10425;Dbxref=GenBank:WP_000621352.1;Name=WP_000621352.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=SO06_RS10425;product=YicC/YloC family endoribonuclease;protein_id=WP_000621352.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 83693 84409 . + . ID=gene-SO06_RS10435;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=SO06_RS10435 NZ_MYDG01000006.1 Protein Homology CDS 83693 84409 . + 0 ID=cds-WP_001247078.1;Parent=gene-SO06_RS10435;Dbxref=GenBank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=SO06_RS10435;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 84488 85129 . + . ID=gene-SO06_RS10440;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=SO06_RS10440 NZ_MYDG01000006.1 Protein Homology CDS 84488 85129 . + 0 ID=cds-WP_000806167.1;Parent=gene-SO06_RS10440;Dbxref=GenBank:WP_000806167.1;Name=WP_000806167.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=SO06_RS10440;product=orotate phosphoribosyltransferase;protein_id=WP_000806167.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 85207 85803 . - . ID=gene-SO06_RS10445;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=SO06_RS10445 NZ_MYDG01000006.1 Protein Homology CDS 85207 85803 . - 0 ID=cds-WP_000818607.1;Parent=gene-SO06_RS10445;Dbxref=GenBank:WP_000818607.1;Name=WP_000818607.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=SO06_RS10445;product=nucleoid occlusion factor SlmA;protein_id=WP_000818607.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 85911 86369 . - . ID=gene-SO06_RS10450;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=SO06_RS10450 NZ_MYDG01000006.1 Protein Homology CDS 85911 86369 . - 0 ID=cds-WP_000976078.1;Parent=gene-SO06_RS10450;Dbxref=GenBank:WP_000976078.1;Name=WP_000976078.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=SO06_RS10450;product=dUTP diphosphatase;protein_id=WP_000976078.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 86347 87567 . - . ID=gene-SO06_RS10455;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=SO06_RS10455 NZ_MYDG01000006.1 Protein Homology CDS 86347 87567 . - 0 ID=cds-WP_000050176.1;Parent=gene-SO06_RS10455;Dbxref=GenBank:WP_000050176.1;Name=WP_000050176.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=SO06_RS10455;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050176.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 87743 88408 . + . ID=gene-SO06_RS10460;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=SO06_RS10460 NZ_MYDG01000006.1 Protein Homology CDS 87743 88408 . + 0 ID=cds-WP_000380129.1;Parent=gene-SO06_RS10460;Dbxref=GenBank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=SO06_RS10460;product=RadC family protein;protein_id=WP_000380129.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 88626 88862 . + . ID=gene-SO06_RS10465;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=SO06_RS10465 NZ_MYDG01000006.1 Protein Homology CDS 88626 88862 . + 0 ID=cds-WP_001519051.1;Parent=gene-SO06_RS10465;Dbxref=GenBank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=SO06_RS10465;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 88883 89050 . + . ID=gene-SO06_RS10470;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=SO06_RS10470 NZ_MYDG01000006.1 Protein Homology CDS 88883 89050 . + 0 ID=cds-WP_001051798.1;Parent=gene-SO06_RS10470;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=SO06_RS10470;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 89148 89957 . + . ID=gene-SO06_RS10475;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=SO06_RS10475 NZ_MYDG01000006.1 Protein Homology CDS 89148 89957 . + 0 ID=cds-WP_001114515.1;Parent=gene-SO06_RS10475;Dbxref=GenBank:WP_001114515.1;Name=WP_001114515.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=SO06_RS10475;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114515.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 89981 90460 . - . ID=gene-SO06_RS10480;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=SO06_RS10480 NZ_MYDG01000006.1 Protein Homology CDS 89981 90460 . - 0 ID=cds-WP_001171884.1;Parent=gene-SO06_RS10480;Dbxref=GenBank:WP_001171884.1;Name=WP_001171884.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=SO06_RS10480;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171884.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 90469 91746 . - . ID=gene-SO06_RS10485;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=SO06_RS10485 NZ_MYDG01000006.1 Protein Homology CDS 90469 91746 . - 0 ID=cds-WP_001661391.1;Parent=gene-SO06_RS10485;Dbxref=GenBank:WP_001661391.1;Name=WP_001661391.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=SO06_RS10485;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_001661391.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 92155 93225 . + . ID=gene-SO06_RS10490;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=SO06_RS10490 NZ_MYDG01000006.1 Protein Homology CDS 92155 93225 . + 0 ID=cds-WP_001526672.1;Parent=gene-SO06_RS10490;Dbxref=GenBank:WP_001526672.1;Name=WP_001526672.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=SO06_RS10490;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_001526672.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 93222 94346 . + . ID=gene-SO06_RS10495;Name=SO06_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10495 NZ_MYDG01000006.1 Protein Homology CDS 93222 94346 . + 0 ID=cds-WP_001261581.1;Parent=gene-SO06_RS10495;Dbxref=GenBank:WP_001261581.1;Name=WP_001261581.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=SO06_RS10495;product=glycosyltransferase family 4 protein;protein_id=WP_001261581.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 94339 95136 . + . ID=gene-SO06_RS10500;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=SO06_RS10500 NZ_MYDG01000006.1 Protein Homology CDS 94339 95136 . + 0 ID=cds-WP_000229825.1;Parent=gene-SO06_RS10500;Dbxref=GenBank:WP_000229825.1;Name=WP_000229825.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=SO06_RS10500;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229825.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 95472 96551 . + . ID=gene-SO06_RS10510;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=SO06_RS10510 NZ_MYDG01000006.1 Protein Homology CDS 95472 96551 . + 0 ID=cds-WP_023231686.1;Parent=gene-SO06_RS10510;Dbxref=GenBank:WP_023231686.1;Name=WP_023231686.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=SO06_RS10510;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_023231686.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 96557 97570 . + . ID=gene-SO06_RS10515;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=SO06_RS10515 NZ_MYDG01000006.1 Protein Homology CDS 96557 97570 . + 0 ID=cds-WP_020899385.1;Parent=gene-SO06_RS10515;Dbxref=GenBank:WP_020899385.1;Name=WP_020899385.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=SO06_RS10515;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_020899385.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 97588 98598 . + . ID=gene-SO06_RS10520;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=SO06_RS10520 NZ_MYDG01000006.1 Protein Homology CDS 97588 98598 . + 0 ID=cds-WP_023231687.1;Parent=gene-SO06_RS10520;Dbxref=GenBank:WP_023231687.1;Name=WP_023231687.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=SO06_RS10520;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_023231687.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 98621 99319 . + . ID=gene-SO06_RS10525;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=SO06_RS10525 NZ_MYDG01000006.1 Protein Homology CDS 98621 99319 . + 0 ID=cds-WP_000582809.1;Parent=gene-SO06_RS10525;Dbxref=GenBank:WP_000582809.1;Name=WP_000582809.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=SO06_RS10525;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000582809.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 99469 100278 . + . ID=gene-SO06_RS10530;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=SO06_RS10530 NZ_MYDG01000006.1 Protein Homology CDS 99469 100278 . + 0 ID=cds-WP_000536017.1;Parent=gene-SO06_RS10530;Dbxref=GenBank:WP_000536017.1;Name=WP_000536017.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=SO06_RS10530;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_000536017.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 100378 101523 . + . ID=gene-SO06_RS10535;Name=SO06_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10535 NZ_MYDG01000006.1 Protein Homology CDS 100378 101523 . + 0 ID=cds-WP_023231689.1;Parent=gene-SO06_RS10535;Dbxref=GenBank:WP_023231689.1;Name=WP_023231689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=SO06_RS10535;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_023231689.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 101581 102795 . - . ID=gene-SO06_RS10540;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=SO06_RS10540 NZ_MYDG01000006.1 Protein Homology CDS 101581 102795 . - 0 ID=cds-WP_001728215.1;Parent=gene-SO06_RS10540;Dbxref=GenBank:WP_001728215.1;Name=WP_001728215.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=SO06_RS10540;product=O-antigen ligase RfaL;protein_id=WP_001728215.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 102835 103788 . - . ID=gene-SO06_RS10545;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=SO06_RS10545 NZ_MYDG01000006.1 Protein Homology CDS 102835 103788 . - 0 ID=cds-WP_001264617.1;Parent=gene-SO06_RS10545;Dbxref=GenBank:WP_001264617.1;Name=WP_001264617.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=SO06_RS10545;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264617.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 103788 104834 . - . ID=gene-SO06_RS10550;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=SO06_RS10550 NZ_MYDG01000006.1 Protein Homology CDS 103788 104834 . - 0 ID=cds-WP_000699196.1;Parent=gene-SO06_RS10550;Dbxref=GenBank:WP_000699196.1;Name=WP_000699196.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=SO06_RS10550;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699196.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 104837 105769 . - . ID=gene-SO06_RS10555;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=SO06_RS10555 NZ_MYDG01000006.1 Protein Homology CDS 104837 105769 . - 0 ID=cds-WP_000587771.1;Parent=gene-SO06_RS10555;Dbxref=GenBank:WP_000587771.1;Name=WP_000587771.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=SO06_RS10555;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587771.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 105972 107168 . + . ID=gene-SO06_RS10560;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=SO06_RS10560 NZ_MYDG01000006.1 Protein Homology CDS 105972 107168 . + 0 ID=cds-WP_001213790.1;Parent=gene-SO06_RS10560;Dbxref=GenBank:WP_001213790.1;Name=WP_001213790.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=SO06_RS10560;product=glycine C-acetyltransferase;protein_id=WP_001213790.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 107178 108203 . + . ID=gene-SO06_RS10565;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=SO06_RS10565 NZ_MYDG01000006.1 Protein Homology CDS 107178 108203 . + 0 ID=cds-WP_000645990.1;Parent=gene-SO06_RS10565;Dbxref=GenBank:WP_000645990.1;Name=WP_000645990.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=SO06_RS10565;product=L-threonine 3-dehydrogenase;protein_id=WP_000645990.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 108497 109531 . + . ID=gene-SO06_RS10570;Name=SO06_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10570 NZ_MYDG01000006.1 Protein Homology CDS 108497 109531 . + 0 ID=cds-WP_023231690.1;Parent=gene-SO06_RS10570;Dbxref=GenBank:WP_023231690.1;Name=WP_023231690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=SO06_RS10570;product=glycosyltransferase;protein_id=WP_023231690.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 109518 110480 . - . ID=gene-SO06_RS10575;Name=SO06_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10575 NZ_MYDG01000006.1 Protein Homology CDS 109518 110480 . - 0 ID=cds-WP_023231691.1;Parent=gene-SO06_RS10575;Dbxref=GenBank:WP_023231691.1;Name=WP_023231691.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=SO06_RS10575;product=divergent polysaccharide deacetylase family protein;protein_id=WP_023231691.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 110484 111743 . - . ID=gene-SO06_RS10580;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=SO06_RS10580 NZ_MYDG01000006.1 Protein Homology CDS 110484 111743 . - 0 ID=cds-WP_231528403.1;Parent=gene-SO06_RS10580;Dbxref=GenBank:WP_231528403.1;Name=WP_231528403.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=SO06_RS10580;product=murein hydrolase activator EnvC;protein_id=WP_231528403.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 111777 113321 . - . ID=gene-SO06_RS10585;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=SO06_RS10585 NZ_MYDG01000006.1 Protein Homology CDS 111777 113321 . - 0 ID=cds-WP_000116589.1;Parent=gene-SO06_RS10585;Dbxref=GenBank:WP_000116589.1;Name=WP_000116589.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=SO06_RS10585;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116589.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 113569 114000 . + . ID=gene-SO06_RS10590;Name=SO06_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10590 NZ_MYDG01000006.1 Protein Homology CDS 113569 114000 . + 0 ID=cds-WP_001156179.1;Parent=gene-SO06_RS10590;Dbxref=GenBank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=SO06_RS10590;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 114086 114337 . + . ID=gene-SO06_RS10595;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=SO06_RS10595 NZ_MYDG01000006.1 Protein Homology CDS 114086 114337 . + 0 ID=cds-WP_001273795.1;Parent=gene-SO06_RS10595;Dbxref=GenBank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=SO06_RS10595;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 114381 114848 . + . ID=gene-SO06_RS10600;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=SO06_RS10600 NZ_MYDG01000006.1 Protein Homology CDS 114381 114848 . + 0 ID=cds-WP_000003370.1;Parent=gene-SO06_RS10600;Dbxref=GenBank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=SO06_RS10600;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 114848 115867 . + . ID=gene-SO06_RS10605;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=SO06_RS10605 NZ_MYDG01000006.1 Protein Homology CDS 114848 115867 . + 0 ID=cds-WP_001076596.1;Parent=gene-SO06_RS10605;Dbxref=GenBank:WP_001076596.1;Name=WP_001076596.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=SO06_RS10605;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076596.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 115945 116766 . + . ID=gene-SO06_RS10610;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=SO06_RS10610 NZ_MYDG01000006.1 Protein Homology CDS 115945 116766 . + 0 ID=cds-WP_001112114.1;Parent=gene-SO06_RS10610;Dbxref=GenBank:WP_001112114.1;Name=WP_001112114.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=SO06_RS10610;product=serine O-acetyltransferase;protein_id=WP_001112114.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 116849 118159 . - . ID=gene-SO06_RS10615;Name=SO06_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10615 NZ_MYDG01000006.1 Protein Homology CDS 116849 118159 . - 0 ID=cds-WP_001092104.1;Parent=gene-SO06_RS10615;Dbxref=GenBank:WP_001092104.1;Name=WP_001092104.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=SO06_RS10615;product=MFS transporter;protein_id=WP_001092104.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 118233 119429 . - . ID=gene-SO06_RS10620;Name=SO06_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10620 NZ_MYDG01000006.1 Protein Homology CDS 118233 119429 . - 0 ID=cds-WP_023231693.1;Parent=gene-SO06_RS10620;Dbxref=GenBank:WP_023231693.1;Name=WP_023231693.1;Ontology_term=GO:0046392,GO:1903663,GO:0008867,GO:1990594;gbkey=CDS;go_function=galactarate dehydratase activity|0008867||IEA,L-altrarate dehydratase activity|1990594||IEA;go_process=galactarate catabolic process|0046392||IEA,L-altrarate catabolic process|1903663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=SO06_RS10620;product=L-talarate/galactarate dehydratase;protein_id=WP_023231693.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 119748 120752 . + . ID=gene-SO06_RS10630;Name=SO06_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10630 NZ_MYDG01000006.1 Protein Homology CDS 119748 120752 . + 0 ID=cds-WP_001805166.1;Parent=gene-SO06_RS10630;Dbxref=GenBank:WP_001805166.1;Name=WP_001805166.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=SO06_RS10630;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001805166.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 120820 121293 . - . ID=gene-SO06_RS10635;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=SO06_RS10635 NZ_MYDG01000006.1 Protein Homology CDS 120820 121293 . - 0 ID=cds-WP_000932335.1;Parent=gene-SO06_RS10635;Dbxref=GenBank:WP_000932335.1;Name=WP_000932335.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=SO06_RS10635;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932335.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 121358 122548 . - . ID=gene-SO06_RS10640;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=SO06_RS10640 NZ_MYDG01000006.1 Protein Homology CDS 121358 122548 . - 0 ID=cds-WP_000586991.1;Parent=gene-SO06_RS10640;Dbxref=GenBank:WP_000586991.1;Name=WP_000586991.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=SO06_RS10640;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_000586991.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 122545 123321 . - . ID=gene-SO06_RS10645;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=SO06_RS10645 NZ_MYDG01000006.1 Protein Homology CDS 122545 123321 . - 0 ID=cds-WP_080204207.1;Parent=gene-SO06_RS10645;Dbxref=GenBank:WP_080204207.1;Name=WP_080204207.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=SO06_RS10645;product=transcriptional regulator LldR;protein_id=WP_080204207.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 123318 124973 . - . ID=gene-SO06_RS10650;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=SO06_RS10650 NZ_MYDG01000006.1 Protein Homology CDS 123318 124973 . - 0 ID=cds-WP_023241119.1;Parent=gene-SO06_RS10650;Dbxref=GenBank:WP_023241119.1;Name=WP_023241119.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=SO06_RS10650;product=L-lactate permease;protein_id=WP_023241119.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 125272 129510 . - . ID=gene-SO06_RS10655;Name=SO06_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10655 NZ_MYDG01000006.1 Protein Homology CDS 125272 129510 . - 0 ID=cds-WP_080204208.1;Parent=gene-SO06_RS10655;Dbxref=GenBank:WP_080204208.1;Name=WP_080204208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033250.1;locus_tag=SO06_RS10655;product=YadA-like family protein;protein_id=WP_080204208.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 129554 130237 . - . ID=gene-SO06_RS10660;Name=SO06_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10660 NZ_MYDG01000006.1 Protein Homology CDS 129554 130237 . - 0 ID=cds-WP_023232403.1;Parent=gene-SO06_RS10660;Dbxref=GenBank:WP_023232403.1;Name=WP_023232403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049680.1;locus_tag=SO06_RS10660;product=DUF3251 domain-containing protein;protein_id=WP_023232403.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 130721 131083 . - . ID=gene-SO06_RS10665;Name=SO06_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10665 NZ_MYDG01000006.1 Protein Homology CDS 130721 131083 . - 0 ID=cds-WP_023183781.1;Parent=gene-SO06_RS10665;Dbxref=GenBank:WP_023183781.1;Name=WP_023183781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=SO06_RS10665;product=YibL family ribosome-associated protein;protein_id=WP_023183781.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 131374 131583 . + . ID=gene-SO06_RS10670;Name=SO06_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10670 NZ_MYDG01000006.1 Protein Homology CDS 131374 131583 . + 0 ID=cds-WP_023232401.1;Parent=gene-SO06_RS10670;Dbxref=GenBank:WP_023232401.1;Name=WP_023232401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=SO06_RS10670;product=hypothetical protein;protein_id=WP_023232401.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 131593 132183 . - . ID=gene-SO06_RS10675;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=SO06_RS10675 NZ_MYDG01000006.1 Protein Homology CDS 131593 132183 . - 0 ID=cds-WP_000193201.1;Parent=gene-SO06_RS10675;Dbxref=GenBank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=SO06_RS10675;product=mannitol operon repressor MtlR;protein_id=WP_000193201.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 132180 133328 . - . ID=gene-SO06_RS10680;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=SO06_RS10680 NZ_MYDG01000006.1 Protein Homology CDS 132180 133328 . - 0 ID=cds-WP_000645391.1;Parent=gene-SO06_RS10680;Dbxref=GenBank:WP_000645391.1;Name=WP_000645391.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=SO06_RS10680;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645391.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 133559 135475 . - . ID=gene-SO06_RS10685;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=SO06_RS10685 NZ_MYDG01000006.1 Protein Homology CDS 133559 135475 . - 0 ID=cds-WP_000093287.1;Parent=gene-SO06_RS10685;Dbxref=GenBank:WP_000093287.1;Name=WP_000093287.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=SO06_RS10685;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093287.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 135951 136559 . + . ID=gene-SO06_RS10690;Name=SO06_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10690 NZ_MYDG01000006.1 Protein Homology CDS 135951 136559 . + 0 ID=cds-WP_000766681.1;Parent=gene-SO06_RS10690;Dbxref=GenBank:WP_000766681.1;Name=WP_000766681.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=SO06_RS10690;product=glutathione S-transferase;protein_id=WP_000766681.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 136658 138049 . + . ID=gene-SO06_RS10695;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=SO06_RS10695 NZ_MYDG01000006.1 Protein Homology CDS 136658 138049 . + 0 ID=cds-WP_000200188.1;Parent=gene-SO06_RS10695;Dbxref=GenBank:WP_000200188.1;Name=WP_000200188.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=SO06_RS10695;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000200188.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 138046 139896 . + . ID=gene-SO06_RS10700;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=SO06_RS10700 NZ_MYDG01000006.1 Protein Homology CDS 138046 139896 . + 0 ID=cds-WP_023138219.1;Parent=gene-SO06_RS10700;Dbxref=GenBank:WP_023138219.1;Name=WP_023138219.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=SO06_RS10700;product=selenocysteine-specific translation elongation factor;protein_id=WP_023138219.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 140144 141025 . - . ID=gene-SO06_RS10705;Name=SO06_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10705 NZ_MYDG01000006.1 Protein Homology CDS 140144 141025 . - 0 ID=cds-WP_023232398.1;Parent=gene-SO06_RS10705;Dbxref=GenBank:WP_023232398.1;Name=WP_023232398.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=SO06_RS10705;product=ROK family protein;protein_id=WP_023232398.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 141194 142732 . + . ID=gene-SO06_RS10710;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=SO06_RS10710 NZ_MYDG01000006.1 Protein Homology CDS 141194 142732 . + 0 ID=cds-WP_000183988.1;Parent=gene-SO06_RS10710;Dbxref=GenBank:WP_000183988.1;Name=WP_000183988.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=SO06_RS10710;product=aldehyde dehydrogenase AldB;protein_id=WP_000183988.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 143018 144973 . - . ID=gene-SO06_RS10715;Name=SO06_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10715 NZ_MYDG01000006.1 Protein Homology CDS 143018 144973 . - 0 ID=cds-WP_023232397.1;Parent=gene-SO06_RS10715;Dbxref=GenBank:WP_023232397.1;Name=WP_023232397.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=SO06_RS10715;product=glycoside hydrolase family 127 protein;protein_id=WP_023232397.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 145237 146052 . + . ID=gene-SO06_RS10720;Name=SO06_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10720 NZ_MYDG01000006.1 Protein Homology CDS 145237 146052 . + 0 ID=cds-WP_023232396.1;Parent=gene-SO06_RS10720;Dbxref=GenBank:WP_023232396.1;Name=WP_023232396.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=SO06_RS10720;product=AraC family transcriptional regulator;protein_id=WP_023232396.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 146213 146908 . - . ID=gene-SO06_RS10725;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=SO06_RS10725 NZ_MYDG01000006.1 Protein Homology CDS 146213 146908 . - 0 ID=cds-WP_023232395.1;Parent=gene-SO06_RS10725;Dbxref=GenBank:WP_023232395.1;Name=WP_023232395.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=SO06_RS10725;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_023232395.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 146902 147762 . - . ID=gene-SO06_RS10730;Name=SO06_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10730 NZ_MYDG01000006.1 Protein Homology CDS 146902 147762 . - 0 ID=cds-WP_023232394.1;Parent=gene-SO06_RS10730;Dbxref=GenBank:WP_023232394.1;Name=WP_023232394.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=SO06_RS10730;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_023232394.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 147755 148417 . - . ID=gene-SO06_RS10735;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=SO06_RS10735 NZ_MYDG01000006.1 Protein Homology CDS 147755 148417 . - 0 ID=cds-WP_023232393.1;Parent=gene-SO06_RS10735;Dbxref=GenBank:WP_023232393.1;Name=WP_023232393.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=SO06_RS10735;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_023232393.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 148414 149910 . - . ID=gene-SO06_RS10740;Name=SO06_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10740 NZ_MYDG01000006.1 Protein Homology CDS 148414 149910 . - 0 ID=cds-WP_023232392.1;Parent=gene-SO06_RS10740;Dbxref=GenBank:WP_023232392.1;Name=WP_023232392.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=SO06_RS10740;product=FGGY-family carbohydrate kinase;protein_id=WP_023232392.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 149914 150900 . - . ID=gene-SO06_RS10745;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=SO06_RS10745 NZ_MYDG01000006.1 Protein Homology CDS 149914 150900 . - 0 ID=cds-WP_023232391.1;Parent=gene-SO06_RS10745;Dbxref=GenBank:WP_023232391.1;Name=WP_023232391.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=SO06_RS10745;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_023232391.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 150912 152189 . - . ID=gene-SO06_RS10750;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=SO06_RS10750 NZ_MYDG01000006.1 Protein Homology CDS 150912 152189 . - 0 ID=cds-WP_000301822.1;Parent=gene-SO06_RS10750;Dbxref=GenBank:WP_000301822.1;Name=WP_000301822.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=SO06_RS10750;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000301822.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 152192 152665 . - . ID=gene-SO06_RS10755;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=SO06_RS10755 NZ_MYDG01000006.1 Protein Homology CDS 152192 152665 . - 0 ID=cds-WP_023232390.1;Parent=gene-SO06_RS10755;Dbxref=GenBank:WP_023232390.1;Name=WP_023232390.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=SO06_RS10755;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_023232390.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 152804 153736 . - . ID=gene-SO06_RS10760;Name=SO06_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10760 NZ_MYDG01000006.1 Protein Homology CDS 152804 153736 . - 0 ID=cds-WP_023181758.1;Parent=gene-SO06_RS10760;Dbxref=GenBank:WP_023181758.1;Name=WP_023181758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462570.1;locus_tag=SO06_RS10760;product=DUF4862 family protein;protein_id=WP_023181758.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 153760 154224 . - . ID=gene-SO06_RS10765;Name=SO06_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10765 NZ_MYDG01000006.1 Protein Homology CDS 153760 154224 . - 0 ID=cds-WP_000576056.1;Parent=gene-SO06_RS10765;Dbxref=GenBank:WP_000576056.1;Name=WP_000576056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=SO06_RS10765;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576056.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 154236 155234 . - . ID=gene-SO06_RS10770;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=SO06_RS10770 NZ_MYDG01000006.1 Protein Homology CDS 154236 155234 . - 0 ID=cds-WP_023232389.1;Parent=gene-SO06_RS10770;Dbxref=GenBank:WP_023232389.1;Name=WP_023232389.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=SO06_RS10770;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_023232389.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 155464 156264 . + . ID=gene-SO06_RS10775;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=SO06_RS10775 NZ_MYDG01000006.1 Protein Homology CDS 155464 156264 . + 0 ID=cds-WP_000081338.1;Parent=gene-SO06_RS10775;Dbxref=GenBank:WP_000081338.1;Name=WP_000081338.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=SO06_RS10775;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000081338.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 156381 156854 . + . ID=gene-SO06_RS10780;Name=SO06_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10780 NZ_MYDG01000006.1 Protein Homology CDS 156381 156854 . + 0 ID=cds-WP_001078811.1;Parent=gene-SO06_RS10780;Dbxref=GenBank:WP_001078811.1;Name=WP_001078811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=SO06_RS10780;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001078811.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 156891 158141 . - . ID=gene-SO06_RS10785;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=SO06_RS10785 NZ_MYDG01000006.1 Protein Homology CDS 156891 158141 . - 0 ID=cds-WP_023232388.1;Parent=gene-SO06_RS10785;Dbxref=GenBank:WP_023232388.1;Name=WP_023232388.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=SO06_RS10785;product=valine--pyruvate transaminase;protein_id=WP_023232388.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 158315 160342 . - . ID=gene-SO06_RS10790;Name=SO06_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10790 NZ_MYDG01000006.1 Protein Homology CDS 158315 160342 . - 0 ID=cds-WP_023232387.1;Parent=gene-SO06_RS10790;Dbxref=GenBank:WP_023232387.1;Name=WP_023232387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=SO06_RS10790;product=alpha-amylase;protein_id=WP_023232387.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 160658 161482 . + . ID=gene-SO06_RS10795;Name=SO06_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10795 NZ_MYDG01000006.1 Protein Homology CDS 160658 161482 . + 0 ID=cds-WP_001575119.1;Parent=gene-SO06_RS10795;Dbxref=GenBank:WP_001575119.1;Name=WP_001575119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=SO06_RS10795;product=protein bax;protein_id=WP_001575119.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 161543 162721 . - . ID=gene-SO06_RS10800;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=SO06_RS10800 NZ_MYDG01000006.1 Protein Homology CDS 161543 162721 . - 0 ID=cds-WP_000459824.1;Parent=gene-SO06_RS10800;Dbxref=GenBank:WP_000459824.1;Name=WP_000459824.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=SO06_RS10800;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000459824.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 163084 164406 . + . ID=gene-SO06_RS10810;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=SO06_RS10810 NZ_MYDG01000006.1 Protein Homology CDS 163084 164406 . + 0 ID=cds-WP_001149561.1;Parent=gene-SO06_RS10810;Dbxref=GenBank:WP_001149561.1;Name=WP_001149561.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=SO06_RS10810;product=xylose isomerase;protein_id=WP_001149561.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 164506 165960 . + . ID=gene-SO06_RS10815;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=SO06_RS10815 NZ_MYDG01000006.1 Protein Homology CDS 164506 165960 . + 0 ID=cds-WP_000275322.1;Parent=gene-SO06_RS10815;Dbxref=GenBank:WP_000275322.1;Name=WP_000275322.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=SO06_RS10815;product=xylulokinase;protein_id=WP_000275322.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 166135 166488 . + . ID=gene-SO06_RS10820;Name=SO06_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10820 NZ_MYDG01000006.1 Protein Homology CDS 166135 166488 . + 0 ID=cds-WP_000340935.1;Parent=gene-SO06_RS10820;Dbxref=GenBank:WP_000340935.1;Name=WP_000340935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=SO06_RS10820;product=YiaA/YiaB family protein;protein_id=WP_000340935.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 166511 167506 . - . ID=gene-SO06_RS10825;Name=SO06_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10825 NZ_MYDG01000006.1 Protein Homology CDS 166511 167506 . - 0 ID=cds-WP_001182582.1;Parent=gene-SO06_RS10825;Dbxref=GenBank:WP_001182582.1;Name=WP_001182582.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=SO06_RS10825;product=acyltransferase;protein_id=WP_001182582.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 167672 167974 . + . ID=gene-SO06_RS10835;Name=SO06_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10835 NZ_MYDG01000006.1 Protein Homology CDS 167672 167974 . + 0 ID=cds-WP_000605590.1;Parent=gene-SO06_RS10835;Dbxref=GenBank:WP_000605590.1;Name=WP_000605590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=SO06_RS10835;product=YsaB family lipoprotein;protein_id=WP_000605590.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 168113 169024 . + . ID=gene-SO06_RS10840;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=SO06_RS10840 NZ_MYDG01000006.1 Protein Homology CDS 168113 169024 . + 0 ID=cds-WP_001168556.1;Parent=gene-SO06_RS10840;Dbxref=GenBank:WP_001168556.1;Name=WP_001168556.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=SO06_RS10840;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168556.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 169034 171103 . + . ID=gene-SO06_RS10845;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=SO06_RS10845 NZ_MYDG01000006.1 Protein Homology CDS 169034 171103 . + 0 ID=cds-WP_023232386.1;Parent=gene-SO06_RS10845;Dbxref=GenBank:WP_023232386.1;Name=WP_023232386.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=SO06_RS10845;product=glycine--tRNA ligase subunit beta;protein_id=WP_023232386.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 171153 171692 . - . ID=gene-SO06_RS10850;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=SO06_RS10850 NZ_MYDG01000006.1 Protein Homology CDS 171153 171692 . - 0 ID=cds-WP_000047148.1;Parent=gene-SO06_RS10850;Dbxref=GenBank:WP_000047148.1;Name=WP_000047148.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=SO06_RS10850;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_000047148.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 171866 172078 . - . ID=gene-SO06_RS10855;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=SO06_RS10855 NZ_MYDG01000006.1 Protein Homology CDS 171866 172078 . - 0 ID=cds-WP_000014594.1;Parent=gene-SO06_RS10855;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=SO06_RS10855;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 172365 172655 . - . ID=gene-SO06_RS10860;Name=SO06_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10860 NZ_MYDG01000006.1 Protein Homology CDS 172365 172655 . - 0 ID=cds-WP_000455790.1;Parent=gene-SO06_RS10860;Dbxref=GenBank:WP_000455790.1;Name=WP_000455790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=SO06_RS10860;product=HTH-type transcriptional regulator;protein_id=WP_000455790.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 173094 173804 . + . ID=gene-SO06_RS10865;Name=SO06_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10865 NZ_MYDG01000006.1 Protein Homology CDS 173094 173804 . + 0 ID=cds-WP_000190524.1;Parent=gene-SO06_RS10865;Dbxref=GenBank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=SO06_RS10865;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 173854 174828 . - . ID=gene-SO06_RS10870;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=SO06_RS10870 NZ_MYDG01000006.1 Protein Homology CDS 173854 174828 . - 0 ID=cds-WP_000804681.1;Parent=gene-SO06_RS10870;Dbxref=GenBank:WP_000804681.1;Name=WP_000804681.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=SO06_RS10870;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000804681.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 175047 175709 . - . ID=gene-SO06_RS10875;Name=SO06_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10875 NZ_MYDG01000006.1 Protein Homology CDS 175047 175709 . - 0 ID=cds-WP_000747548.1;Parent=gene-SO06_RS10875;Dbxref=GenBank:WP_000747548.1;Name=WP_000747548.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=SO06_RS10875;product=OmpA family lipoprotein;protein_id=WP_000747548.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 175862 178195 . + . ID=gene-SO06_RS10880;Name=SO06_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10880 NZ_MYDG01000006.1 Protein Homology CDS 175862 178195 . + 0 ID=cds-WP_000148455.1;Parent=gene-SO06_RS10880;Dbxref=GenBank:WP_000148455.1;Name=WP_000148455.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=SO06_RS10880;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_000148455.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 178164 178604 . - . ID=gene-SO06_RS10885;Name=SO06_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10885 NZ_MYDG01000006.1 Protein Homology CDS 178164 178604 . - 0 ID=cds-WP_023232385.1;Parent=gene-SO06_RS10885;Dbxref=GenBank:WP_023232385.1;Name=WP_023232385.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=SO06_RS10885;product=N-acetyltransferase;protein_id=WP_023232385.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 178582 179163 . - . ID=gene-SO06_RS10890;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=SO06_RS10890 NZ_MYDG01000006.1 Protein Homology CDS 178582 179163 . - 0 ID=cds-WP_001188421.1;Parent=gene-SO06_RS10890;Dbxref=GenBank:WP_001188421.1;Name=WP_001188421.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=SO06_RS10890;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001188421.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 179320 180024 . + . ID=gene-SO06_RS10895;Name=SO06_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10895 NZ_MYDG01000006.1 Protein Homology CDS 179320 180024 . + 0 ID=cds-WP_000637070.1;Parent=gene-SO06_RS10895;Dbxref=GenBank:WP_000637070.1;Name=WP_000637070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=SO06_RS10895;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637070.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 180255 181946 . + . ID=gene-SO06_RS10900;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=SO06_RS10900 NZ_MYDG01000006.1 Protein Homology CDS 180255 181946 . + 0 ID=cds-WP_023232384.1;Parent=gene-SO06_RS10900;Dbxref=GenBank:WP_023232384.1;Name=WP_023232384.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=SO06_RS10900;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_023232384.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 182037 182113 . + . ID=gene-SO06_RS10905;Name=SO06_RS10905;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS10905 NZ_MYDG01000006.1 tRNAscan-SE tRNA 182037 182113 . + . ID=rna-SO06_RS10905;Parent=gene-SO06_RS10905;anticodon=(pos:182071..182073);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS10905;product=tRNA-Pro NZ_MYDG01000006.1 tRNAscan-SE exon 182037 182113 . + . ID=exon-SO06_RS10905-1;Parent=rna-SO06_RS10905;anticodon=(pos:182071..182073);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS10905;product=tRNA-Pro NZ_MYDG01000006.1 RefSeq gene 182150 182283 . + . ID=gene-SO06_RS10910;Name=SO06_RS10910;gbkey=Gene;gene_biotype=ncRNA;locus_tag=SO06_RS10910 NZ_MYDG01000006.1 cmsearch ncRNA 182150 182283 . + . ID=rna-SO06_RS10910;Parent=gene-SO06_RS10910;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS10910;product=RtT sRNA NZ_MYDG01000006.1 cmsearch exon 182150 182283 . + . ID=exon-SO06_RS10910-1;Parent=rna-SO06_RS10910;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS10910;product=RtT sRNA NZ_MYDG01000006.1 RefSeq gene 182318 182436 . + . ID=gene-SO06_RS10915;Name=SO06_RS10915;gbkey=Gene;gene_biotype=ncRNA;locus_tag=SO06_RS10915 NZ_MYDG01000006.1 cmsearch ncRNA 182318 182436 . + . ID=rna-SO06_RS10915;Parent=gene-SO06_RS10915;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS10915;product=RtT sRNA NZ_MYDG01000006.1 cmsearch exon 182318 182436 . + . ID=exon-SO06_RS10915-1;Parent=rna-SO06_RS10915;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS10915;product=RtT sRNA NZ_MYDG01000006.1 RefSeq gene 182427 183434 . - . ID=gene-SO06_RS10920;Name=SO06_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10920 NZ_MYDG01000006.1 Protein Homology CDS 182427 183434 . - 0 ID=cds-WP_023232383.1;Parent=gene-SO06_RS10920;Dbxref=GenBank:WP_023232383.1;Name=WP_023232383.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=SO06_RS10920;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_023232383.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 183584 184708 . + . ID=gene-SO06_RS10925;Name=SO06_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10925 NZ_MYDG01000006.1 Protein Homology CDS 183584 184708 . + 0 ID=cds-WP_023232382.1;Parent=gene-SO06_RS10925;Dbxref=GenBank:WP_023232382.1;Name=WP_023232382.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=SO06_RS10925;product=aryl-sulfate sulfotransferase;protein_id=WP_023232382.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 184766 186091 . + . ID=gene-SO06_RS10930;Name=SO06_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10930 NZ_MYDG01000006.1 Protein Homology CDS 184766 186091 . + 0 ID=cds-WP_001136079.1;Parent=gene-SO06_RS10930;Dbxref=GenBank:WP_001136079.1;Name=WP_001136079.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=SO06_RS10930;product=uracil-xanthine permease family protein;protein_id=WP_001136079.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 186646 188253 . + . ID=gene-SO06_RS10940;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=SO06_RS10940 NZ_MYDG01000006.1 Protein Homology CDS 186646 188253 . + 0 ID=cds-WP_000028047.1;Parent=gene-SO06_RS10940;Dbxref=GenBank:WP_000028047.1;Name=WP_000028047.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=SO06_RS10940;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_000028047.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 188410 189429 . + . ID=gene-SO06_RS10945;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=SO06_RS10945 NZ_MYDG01000006.1 Protein Homology CDS 188410 189429 . + 0 ID=cds-WP_000938843.1;Parent=gene-SO06_RS10945;Dbxref=GenBank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=SO06_RS10945;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 189439 190341 . + . ID=gene-SO06_RS10950;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=SO06_RS10950 NZ_MYDG01000006.1 Protein Homology CDS 189439 190341 . + 0 ID=cds-WP_000084690.1;Parent=gene-SO06_RS10950;Dbxref=GenBank:WP_000084690.1;Name=WP_000084690.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=SO06_RS10950;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084690.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 190352 191335 . + . ID=gene-SO06_RS10955;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=SO06_RS10955 NZ_MYDG01000006.1 Protein Homology CDS 190352 191335 . + 0 ID=cds-WP_001196509.1;Parent=gene-SO06_RS10955;Dbxref=GenBank:WP_001196509.1;Name=WP_001196509.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=SO06_RS10955;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196509.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 191332 192345 . + . ID=gene-SO06_RS10960;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=SO06_RS10960 NZ_MYDG01000006.1 Protein Homology CDS 191332 192345 . + 0 ID=cds-WP_000103563.1;Parent=gene-SO06_RS10960;Dbxref=GenBank:WP_000103563.1;Name=WP_000103563.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=SO06_RS10960;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000103563.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 192446 193744 . - . ID=gene-SO06_RS10965;Name=SO06_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10965 NZ_MYDG01000006.1 Protein Homology CDS 192446 193744 . - 0 ID=cds-WP_023232381.1;Parent=gene-SO06_RS10965;Dbxref=GenBank:WP_023232381.1;Name=WP_023232381.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=SO06_RS10965;product=aromatic amino acid transport family protein;protein_id=WP_023232381.1;transl_table=11 NZ_MYDG01000006.1 RefSeq pseudogene 193862 194014 . - . ID=gene-SO06_RS25550;Name=SO06_RS25550;end_range=194014,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25550;partial=true;pseudo=true NZ_MYDG01000006.1 Protein Homology CDS 193862 194014 . - 0 ID=cds-SO06_RS25550;Parent=gene-SO06_RS25550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;end_range=194014,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.6;locus_tag=SO06_RS25550;partial=true;product=PLP-dependent transferase;pseudo=true;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 194387 194494 . + . ID=gene-SO06_RS10980;Name=SO06_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS10980 NZ_MYDG01000006.1 Protein Homology CDS 194387 194494 . + 0 ID=cds-WP_001537650.1;Parent=gene-SO06_RS10980;Dbxref=GenBank:WP_001537650.1;Name=WP_001537650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=SO06_RS10980;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001537650.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 194576 196255 . - . ID=gene-SO06_RS10985;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=SO06_RS10985 NZ_MYDG01000006.1 Protein Homology CDS 194576 196255 . - 0 ID=cds-WP_000192022.1;Parent=gene-SO06_RS10985;Dbxref=GenBank:WP_000192022.1;Name=WP_000192022.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=SO06_RS10985;product=cellulose biosynthesis protein BcsG;protein_id=WP_000192022.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 196252 196443 . - . ID=gene-SO06_RS10990;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=SO06_RS10990 NZ_MYDG01000006.1 Protein Homology CDS 196252 196443 . - 0 ID=cds-WP_000988321.1;Parent=gene-SO06_RS10990;Dbxref=GenBank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=SO06_RS10990;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 196440 198011 . - . ID=gene-SO06_RS10995;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=SO06_RS10995 NZ_MYDG01000006.1 Protein Homology CDS 196440 198011 . - 0 ID=cds-WP_023197652.1;Parent=gene-SO06_RS10995;Dbxref=GenBank:WP_023197652.1;Name=WP_023197652.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=SO06_RS10995;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_023197652.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 198256 198459 . + . ID=gene-SO06_RS11000;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=SO06_RS11000 NZ_MYDG01000006.1 Protein Homology CDS 198256 198459 . + 0 ID=cds-WP_000282616.1;Parent=gene-SO06_RS11000;Dbxref=GenBank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=SO06_RS11000;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 198460 199212 . + . ID=gene-SO06_RS11005;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=SO06_RS11005 NZ_MYDG01000006.1 Protein Homology CDS 198460 199212 . + 0 ID=cds-WP_023232380.1;Parent=gene-SO06_RS11005;Dbxref=GenBank:WP_023232380.1;Name=WP_023232380.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=SO06_RS11005;product=cellulose biosynthesis protein BcsQ;protein_id=WP_023232380.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 199209 201833 . + . ID=gene-SO06_RS11010;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=SO06_RS11010 NZ_MYDG01000006.1 Protein Homology CDS 199209 201833 . + 0 ID=cds-WP_001275342.1;Parent=gene-SO06_RS11010;Dbxref=GenBank:WP_001275342.1;Name=WP_001275342.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=SO06_RS11010;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_001275342.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 201844 204144 . + . ID=gene-SO06_RS11015;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=SO06_RS11015 NZ_MYDG01000006.1 Protein Homology CDS 201844 204144 . + 0 ID=cds-WP_000823809.1;Parent=gene-SO06_RS11015;Dbxref=GenBank:WP_000823809.1;Name=WP_000823809.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=SO06_RS11015;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_000823809.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 204148 205257 . + . ID=gene-SO06_RS11020;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=SO06_RS11020 NZ_MYDG01000006.1 Protein Homology CDS 204148 205257 . + 0 ID=cds-WP_000988803.1;Parent=gene-SO06_RS11020;Dbxref=GenBank:WP_000988803.1;Name=WP_000988803.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=SO06_RS11020;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_000988803.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 205239 208781 . + . ID=gene-SO06_RS11025;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=SO06_RS11025 NZ_MYDG01000006.1 Protein Homology CDS 205239 208781 . + 0 ID=cds-WP_023232294.1;Parent=gene-SO06_RS11025;Dbxref=GenBank:WP_023232294.1;Name=WP_023232294.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=SO06_RS11025;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_023232294.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 208955 210961 . + . ID=gene-SO06_RS11035;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=SO06_RS11035 NZ_MYDG01000006.1 Protein Homology CDS 208955 210961 . + 0 ID=cds-WP_001266363.1;Parent=gene-SO06_RS11035;Dbxref=GenBank:WP_001266363.1;Name=WP_001266363.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=SO06_RS11035;product=biofilm formation regulator HmsP;protein_id=WP_001266363.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 211119 212405 . + . ID=gene-SO06_RS11040;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=SO06_RS11040 NZ_MYDG01000006.1 Protein Homology CDS 211119 212405 . + 0 ID=cds-WP_000858228.1;Parent=gene-SO06_RS11040;Dbxref=GenBank:WP_000858228.1;Name=WP_000858228.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=SO06_RS11040;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858228.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 212625 214112 . + . ID=gene-SO06_RS11045;Name=SO06_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11045 NZ_MYDG01000006.1 Protein Homology CDS 212625 214112 . + 0 ID=cds-WP_001163182.1;Parent=gene-SO06_RS11045;Dbxref=GenBank:WP_001163182.1;Name=WP_001163182.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=SO06_RS11045;product=M16 family metallopeptidase;protein_id=WP_001163182.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 214166 215095 . - . ID=gene-SO06_RS11050;Name=SO06_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11050 NZ_MYDG01000006.1 Protein Homology CDS 214166 215095 . - 0 ID=cds-WP_000037583.1;Parent=gene-SO06_RS11050;Dbxref=GenBank:WP_000037583.1;Name=WP_000037583.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=SO06_RS11050;product=sugar kinase;protein_id=WP_000037583.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 215324 216091 . + . ID=gene-SO06_RS11055;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=SO06_RS11055 NZ_MYDG01000006.1 Protein Homology CDS 215324 216091 . + 0 ID=cds-WP_000595626.1;Parent=gene-SO06_RS11055;Dbxref=GenBank:WP_000595626.1;Name=WP_000595626.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=SO06_RS11055;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595626.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 216201 218261 . + . ID=gene-SO06_RS11060;Name=SO06_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11060 NZ_MYDG01000006.1 Protein Homology CDS 216201 218261 . + 0 ID=cds-WP_000158680.1;Parent=gene-SO06_RS11060;Dbxref=GenBank:WP_000158680.1;Name=WP_000158680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=SO06_RS11060;product=AsmA family protein;protein_id=WP_000158680.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 218301 219623 . - . ID=gene-SO06_RS11065;Name=SO06_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11065 NZ_MYDG01000006.1 Protein Homology CDS 218301 219623 . - 0 ID=cds-WP_001148981.1;Parent=gene-SO06_RS11065;Dbxref=GenBank:WP_001148981.1;Name=WP_001148981.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=SO06_RS11065;product=MFS transporter;protein_id=WP_001148981.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 219974 221002 . - . ID=gene-SO06_RS11070;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=SO06_RS11070 NZ_MYDG01000006.1 Protein Homology CDS 219974 221002 . - 0 ID=cds-WP_000191231.1;Parent=gene-SO06_RS11070;Dbxref=GenBank:WP_000191231.1;Name=WP_000191231.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=SO06_RS11070;product=inner membrane protein YhjD;protein_id=WP_000191231.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 221075 221974 . - . ID=gene-SO06_RS11075;Name=SO06_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11075 NZ_MYDG01000006.1 Protein Homology CDS 221075 221974 . - 0 ID=cds-WP_000358051.1;Parent=gene-SO06_RS11075;Dbxref=GenBank:WP_000358051.1;Name=WP_000358051.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=SO06_RS11075;product=LysR family transcriptional regulator;protein_id=WP_000358051.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 222605 223207 . + . ID=gene-SO06_RS11080;Name=SO06_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11080 NZ_MYDG01000006.1 Protein Homology CDS 222605 223207 . + 0 ID=cds-WP_001196084.1;Parent=gene-SO06_RS11080;Dbxref=GenBank:WP_001196084.1;Name=WP_001196084.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=SO06_RS11080;product=helix-turn-helix transcriptional regulator;protein_id=WP_001196084.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 223213 223569 . - . ID=gene-SO06_RS11085;Name=SO06_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11085 NZ_MYDG01000006.1 Protein Homology CDS 223213 223569 . - 0 ID=cds-WP_001120249.1;Parent=gene-SO06_RS11085;Dbxref=GenBank:WP_001120249.1;Name=WP_001120249.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=SO06_RS11085;product=glycoside hydrolase family protein;protein_id=WP_001120249.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 223850 225439 . + . ID=gene-SO06_RS11090;Name=SO06_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11090 NZ_MYDG01000006.1 Protein Homology CDS 223850 225439 . + 0 ID=cds-WP_023232293.1;Parent=gene-SO06_RS11090;Dbxref=GenBank:WP_023232293.1;Name=WP_023232293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=SO06_RS11090;product=STY4199 family HEPN domain-containing protein;protein_id=WP_023232293.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 225452 227101 . - . ID=gene-SO06_RS11095;Name=SO06_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11095 NZ_MYDG01000006.1 Protein Homology CDS 225452 227101 . - 0 ID=cds-WP_000934257.1;Parent=gene-SO06_RS11095;Dbxref=GenBank:WP_000934257.1;Name=WP_000934257.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=SO06_RS11095;product=alpha%2Calpha-trehalase;protein_id=WP_000934257.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 227428 228147 . + . ID=gene-SO06_RS11100;Name=SO06_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11100 NZ_MYDG01000006.1 Protein Homology CDS 227428 228147 . + 0 ID=cds-WP_000572568.1;Parent=gene-SO06_RS11100;Dbxref=GenBank:WP_000572568.1;Name=WP_000572568.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=SO06_RS11100;product=GntR family transcriptional regulator;protein_id=WP_000572568.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 228323 229300 . + . ID=gene-SO06_RS11105;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=SO06_RS11105 NZ_MYDG01000006.1 Protein Homology CDS 228323 229300 . + 0 ID=cds-WP_077248388.1;Parent=gene-SO06_RS11105;Dbxref=GenBank:WP_077248388.1;Name=WP_077248388.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=SO06_RS11105;product=6-phosphofructose-aspartate deglycase;protein_id=WP_077248388.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 229364 230209 . + . ID=gene-SO06_RS11110;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=SO06_RS11110 NZ_MYDG01000006.1 Protein Homology CDS 229364 230209 . + 0 ID=cds-WP_023232291.1;Parent=gene-SO06_RS11110;Dbxref=GenBank:WP_023232291.1;Name=WP_023232291.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=SO06_RS11110;product=fructose-aspartate kinase;protein_id=WP_023232291.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 230263 231582 . + . ID=gene-SO06_RS11115;Name=SO06_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11115 NZ_MYDG01000006.1 Protein Homology CDS 230263 231582 . + 0 ID=cds-WP_000498935.1;Parent=gene-SO06_RS11115;Dbxref=GenBank:WP_000498935.1;Name=WP_000498935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=SO06_RS11115;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_000498935.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 231641 232684 . + . ID=gene-SO06_RS11120;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=SO06_RS11120 NZ_MYDG01000006.1 Protein Homology CDS 231641 232684 . + 0 ID=cds-WP_023232290.1;Parent=gene-SO06_RS11120;Dbxref=GenBank:WP_023232290.1;Name=WP_023232290.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=SO06_RS11120;product=fructose-asparagine asparaginase;protein_id=WP_023232290.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 232731 234083 . - . ID=gene-SO06_RS11125;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=SO06_RS11125 NZ_MYDG01000006.1 Protein Homology CDS 232731 234083 . - 0 ID=cds-WP_023232289.1;Parent=gene-SO06_RS11125;Dbxref=GenBank:WP_023232289.1;Name=WP_023232289.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=SO06_RS11125;product=glutathione-disulfide reductase;protein_id=WP_023232289.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 234188 235030 . - . ID=gene-SO06_RS11130;Name=SO06_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11130 NZ_MYDG01000006.1 Protein Homology CDS 234188 235030 . - 0 ID=cds-WP_023232288.1;Parent=gene-SO06_RS11130;Dbxref=GenBank:WP_023232288.1;Name=WP_023232288.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=SO06_RS11130;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_023232288.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 235241 236512 . + . ID=gene-SO06_RS11135;Name=SO06_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11135 NZ_MYDG01000006.1 Protein Homology CDS 235241 236512 . + 0 ID=cds-WP_000766150.1;Parent=gene-SO06_RS11135;Dbxref=GenBank:WP_000766150.1;Name=WP_000766150.1;Ontology_term=GO:0016311,GO:0003993;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=SO06_RS11135;product=acid phosphatase;protein_id=WP_000766150.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 236694 238736 . + . ID=gene-SO06_RS11140;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=SO06_RS11140 NZ_MYDG01000006.1 Protein Homology CDS 236694 238736 . + 0 ID=cds-WP_000184178.1;Parent=gene-SO06_RS11140;Dbxref=GenBank:WP_000184178.1;Name=WP_000184178.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=SO06_RS11140;product=oligopeptidase A;protein_id=WP_000184178.1;transl_table=11 NZ_MYDG01000006.1 RefSeq gene 238743 239131 . + . ID=gene-SO06_RS11145;Name=SO06_RS11145;end_range=239131,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11145;partial=true NZ_MYDG01000006.1 Protein Homology CDS 238743 239131 . + 0 ID=cds-WP_176210688.1;Parent=gene-SO06_RS11145;Dbxref=GenBank:WP_176210688.1;Name=WP_176210688.1;Ontology_term=GO:0031167,GO:0008990;end_range=239131,.;gbkey=CDS;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=SO06_RS11145;partial=true;product=class I SAM-dependent methyltransferase;protein_id=WP_176210688.1;transl_table=11 ##sequence-region NZ_MYDG01000070.1 1 269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000070.1 RefSeq region 1 269 . + . ID=NZ_MYDG01000070.1:1..269;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000070.1 RefSeq gene 1 147 . + . ID=gene-SO06_RS24845;Name=SO06_RS24845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS24845;partial=true;start_range=.,1 NZ_MYDG01000070.1 Protein Homology CDS 1 147 . + 0 ID=cds-WP_023893864.1;Parent=gene-SO06_RS24845;Dbxref=GenBank:WP_023893864.1;Name=WP_023893864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=SO06_RS24845;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_023893864.1;start_range=.,1;transl_table=11 NZ_MYDG01000070.1 RefSeq pseudogene 160 269 . + . ID=gene-SO06_RS24850;Name=SO06_RS24850;end_range=269,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS24850;partial=true;pseudo=true NZ_MYDG01000070.1 Protein Homology CDS 160 269 . + 0 ID=cds-SO06_RS24850;Parent=gene-SO06_RS24850;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=269,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=SO06_RS24850;partial=true;product=sodium ion-translocating decarboxylase subunit beta;pseudo=true;transl_table=11 ##sequence-region NZ_MYDG01000071.1 1 264 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000071.1 RefSeq region 1 264 . + . ID=NZ_MYDG01000071.1:1..264;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000071.1 RefSeq pseudogene 1 231 . - . ID=gene-SO06_RS24855;Name=SO06_RS24855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS24855;partial=true;pseudo=true;start_range=.,1 NZ_MYDG01000071.1 Protein Homology CDS 1 231 . - 0 ID=cds-SO06_RS24855;Parent=gene-SO06_RS24855;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052606.1;locus_tag=SO06_RS24855;partial=true;product=type II toxin-antitoxin system mRNA endoribonuclease LsoA;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_MYDG01000072.1 1 259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000072.1 RefSeq region 1 259 . + . ID=NZ_MYDG01000072.1:1..259;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000072.1 RefSeq pseudogene 1 259 . + . ID=gene-SO06_RS24860;Name=SO06_RS24860;end_range=259,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS24860;partial=true;pseudo=true;start_range=.,1 NZ_MYDG01000072.1 Protein Homology CDS 1 259 . + 2 ID=cds-SO06_RS24860;Parent=gene-SO06_RS24860;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=259,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=SO06_RS24860;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_MYDG01000073.1 1 257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000073.1 RefSeq region 1 257 . + . ID=NZ_MYDG01000073.1:1..257;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000073.1 RefSeq pseudogene 1 228 . + . ID=gene-SO06_RS24865;Name=SO06_RS24865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS24865;partial=true;pseudo=true;start_range=.,1 NZ_MYDG01000073.1 Protein Homology CDS 1 228 . + 0 ID=cds-SO06_RS24865;Parent=gene-SO06_RS24865;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722544.1;locus_tag=SO06_RS24865;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_MYDG01000074.1 1 247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000074.1 RefSeq region 1 247 . + . ID=NZ_MYDG01000074.1:1..247;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000074.1 RefSeq gene 1 247 . - . ID=gene-SO06_RS24870;Name=SO06_RS24870;end_range=247,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=SO06_RS24870;partial=true;start_range=.,1 NZ_MYDG01000074.1 cmsearch rRNA 1 247 . - . ID=rna-SO06_RS24870;Parent=gene-SO06_RS24870;Dbxref=RFAM:RF02541;end_range=247,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24870;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_MYDG01000074.1 cmsearch exon 1 247 . - . ID=exon-SO06_RS24870-1;Parent=rna-SO06_RS24870;Dbxref=RFAM:RF02541;end_range=247,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS24870;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_MYDG01000075.1 1 224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000075.1 RefSeq region 1 224 . + . ID=NZ_MYDG01000075.1:1..224;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000075.1 RefSeq pseudogene 104 224 . + . ID=gene-SO06_RS25330;Name=SO06_RS25330;end_range=224,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25330;partial=true;pseudo=true NZ_MYDG01000075.1 Protein Homology CDS 104 224 . + 0 ID=cds-SO06_RS25330;Parent=gene-SO06_RS25330;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=224,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052604.1;locus_tag=SO06_RS25330;partial=true;product=nikA protein;pseudo=true;transl_table=11 ##sequence-region NZ_MYDG01000076.1 1 208 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000076.1 RefSeq region 1 208 . + . ID=NZ_MYDG01000076.1:1..208;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica ##sequence-region NZ_MYDG01000007.1 1 216705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000007.1 RefSeq region 1 216705 . + . ID=NZ_MYDG01000007.1:1..216705;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000007.1 RefSeq gene 98 334 . - . ID=gene-SO06_RS11150;Name=SO06_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11150 NZ_MYDG01000007.1 Protein Homology CDS 98 334 . - 0 ID=cds-WP_000941877.1;Parent=gene-SO06_RS11150;Dbxref=GenBank:WP_000941877.1;Name=WP_000941877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=SO06_RS11150;product=DUF1435 domain-containing protein;protein_id=WP_000941877.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 585 1649 . + . ID=gene-SO06_RS11155;Name=SO06_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11155 NZ_MYDG01000007.1 Protein Homology CDS 585 1649 . + 0 ID=cds-WP_000211207.1;Parent=gene-SO06_RS11155;Dbxref=GenBank:WP_000211207.1;Name=WP_000211207.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=SO06_RS11155;product=GGDEF domain-containing protein;protein_id=WP_000211207.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 1770 2558 . + . ID=gene-SO06_RS11160;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=SO06_RS11160 NZ_MYDG01000007.1 Protein Homology CDS 1770 2558 . + 0 ID=cds-WP_001525831.1;Parent=gene-SO06_RS11160;Dbxref=GenBank:WP_001525831.1;Name=WP_001525831.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=SO06_RS11160;product=siderophore-iron reductase FhuF;protein_id=WP_001525831.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 2709 3167 . + . ID=gene-SO06_RS11165;Name=SO06_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11165 NZ_MYDG01000007.1 Protein Homology CDS 2709 3167 . + 0 ID=cds-WP_000058276.1;Parent=gene-SO06_RS11165;Dbxref=GenBank:WP_000058276.1;Name=WP_000058276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=SO06_RS11165;product=YbaK/EbsC family protein;protein_id=WP_000058276.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 3218 3892 . - . ID=gene-SO06_RS11170;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=SO06_RS11170 NZ_MYDG01000007.1 Protein Homology CDS 3218 3892 . - 0 ID=cds-WP_000431551.1;Parent=gene-SO06_RS11170;Dbxref=GenBank:WP_000431551.1;Name=WP_000431551.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=SO06_RS11170;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431551.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 3853 4578 . - . ID=gene-SO06_RS11175;Name=SO06_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11175 NZ_MYDG01000007.1 Protein Homology CDS 3853 4578 . - 0 ID=cds-WP_000936652.1;Parent=gene-SO06_RS11175;Dbxref=GenBank:WP_000936652.1;Name=WP_000936652.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=SO06_RS11175;product=response regulator transcription factor;protein_id=WP_000936652.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 5291 6067 . + . ID=gene-SO06_RS11180;Name=SO06_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11180 NZ_MYDG01000007.1 Protein Homology CDS 5291 6067 . + 0 ID=cds-WP_001747536.1;Parent=gene-SO06_RS11180;Dbxref=GenBank:WP_001747536.1;Name=WP_001747536.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=SO06_RS11180;product=threonine/serine ThrE exporter family protein;protein_id=WP_001747536.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 6058 6531 . + . ID=gene-SO06_RS11185;Name=SO06_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11185 NZ_MYDG01000007.1 Protein Homology CDS 6058 6531 . + 0 ID=cds-WP_000511329.1;Parent=gene-SO06_RS11185;Dbxref=GenBank:WP_000511329.1;Name=WP_000511329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=SO06_RS11185;product=threonine/serine exporter;protein_id=WP_000511329.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 6624 7163 . + . ID=gene-SO06_RS11190;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=SO06_RS11190 NZ_MYDG01000007.1 Protein Homology CDS 6624 7163 . + 0 ID=cds-WP_000098578.1;Parent=gene-SO06_RS11190;Dbxref=GenBank:WP_000098578.1;Name=WP_000098578.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=SO06_RS11190;product=primosomal protein DnaT;protein_id=WP_000098578.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 7166 7903 . + . ID=gene-SO06_RS11195;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=SO06_RS11195 NZ_MYDG01000007.1 Protein Homology CDS 7166 7903 . + 0 ID=cds-WP_000799924.1;Parent=gene-SO06_RS11195;Dbxref=GenBank:WP_000799924.1;Name=WP_000799924.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=SO06_RS11195;product=DNA replication protein DnaC;protein_id=WP_000799924.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 7961 8422 . + . ID=gene-SO06_RS11200;Name=SO06_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11200 NZ_MYDG01000007.1 Protein Homology CDS 7961 8422 . + 0 ID=cds-WP_001090312.1;Parent=gene-SO06_RS11200;Dbxref=GenBank:WP_001090312.1;Name=WP_001090312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=SO06_RS11200;product=DUF2501 domain-containing protein;protein_id=WP_001090312.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 8705 10996 . + . ID=gene-SO06_RS11205;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=SO06_RS11205 NZ_MYDG01000007.1 Protein Homology CDS 8705 10996 . + 0 ID=cds-WP_080204209.1;Parent=gene-SO06_RS11205;Dbxref=GenBank:WP_080204209.1;Name=WP_080204209.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=SO06_RS11205;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_080204209.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 11130 12140 . - . ID=gene-SO06_RS11210;Name=SO06_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11210 NZ_MYDG01000007.1 Protein Homology CDS 11130 12140 . - 0 ID=cds-WP_176208150.1;Parent=gene-SO06_RS11210;Dbxref=GenBank:WP_176208150.1;Name=WP_176208150.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=SO06_RS11210;product=SIS domain-containing protein;protein_id=WP_176208150.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 12158 13219 . - . ID=gene-SO06_RS11215;Name=SO06_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11215 NZ_MYDG01000007.1 Protein Homology CDS 12158 13219 . - 0 ID=cds-WP_023231479.1;Parent=gene-SO06_RS11215;Dbxref=GenBank:WP_023231479.1;Name=WP_023231479.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=SO06_RS11215;product=SIS domain-containing protein;protein_id=WP_023231479.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 13232 14080 . - . ID=gene-SO06_RS11220;Name=SO06_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11220 NZ_MYDG01000007.1 Protein Homology CDS 13232 14080 . - 0 ID=cds-WP_000178065.1;Parent=gene-SO06_RS11220;Dbxref=GenBank:WP_000178065.1;Name=WP_000178065.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=SO06_RS11220;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000178065.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 14058 14837 . - . ID=gene-SO06_RS11225;Name=SO06_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11225 NZ_MYDG01000007.1 Protein Homology CDS 14058 14837 . - 0 ID=cds-WP_000568569.1;Parent=gene-SO06_RS11225;Dbxref=GenBank:WP_000568569.1;Name=WP_000568569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=SO06_RS11225;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000568569.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 14863 15324 . - . ID=gene-SO06_RS11230;Name=SO06_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11230 NZ_MYDG01000007.1 Protein Homology CDS 14863 15324 . - 0 ID=cds-WP_000634729.1;Parent=gene-SO06_RS11230;Dbxref=GenBank:WP_000634729.1;Name=WP_000634729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=SO06_RS11230;product=PTS sugar transporter subunit IIB;protein_id=WP_000634729.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 15339 15761 . - . ID=gene-SO06_RS11235;Name=SO06_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11235 NZ_MYDG01000007.1 Protein Homology CDS 15339 15761 . - 0 ID=cds-WP_080204211.1;Parent=gene-SO06_RS11235;Dbxref=GenBank:WP_080204211.1;Name=WP_080204211.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=SO06_RS11235;product=PTS sugar transporter subunit IIA;protein_id=WP_080204211.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 15863 18628 . - . ID=gene-SO06_RS11240;Name=SO06_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11240 NZ_MYDG01000007.1 Protein Homology CDS 15863 18628 . - 0 ID=cds-WP_045341629.1;Parent=gene-SO06_RS11240;Dbxref=GenBank:WP_045341629.1;Name=WP_045341629.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=SO06_RS11240;product=sigma 54-interacting transcriptional regulator;protein_id=WP_045341629.1;transl_table=11 NZ_MYDG01000007.1 RefSeq pseudogene 18762 18839 . + . ID=gene-SO06_RS25025;Name=SO06_RS25025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25025;partial=true;pseudo=true;start_range=.,18762 NZ_MYDG01000007.1 Protein Homology CDS 18762 18839 . + 0 ID=cds-SO06_RS25025;Parent=gene-SO06_RS25025;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134222.1;locus_tag=SO06_RS25025;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,18762;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 18952 20613 . - . ID=gene-SO06_RS11245;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=SO06_RS11245 NZ_MYDG01000007.1 Protein Homology CDS 18952 20613 . - 0 ID=cds-WP_000919511.1;Parent=gene-SO06_RS11245;Dbxref=GenBank:WP_000919511.1;Name=WP_000919511.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=SO06_RS11245;product=methyl-accepting chemotaxis protein;protein_id=WP_000919511.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 20980 23130 . + . ID=gene-SO06_RS11250;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=SO06_RS11250 NZ_MYDG01000007.1 Protein Homology CDS 20980 23130 . + 0 ID=cds-WP_058820999.1;Parent=gene-SO06_RS11250;Dbxref=GenBank:WP_058820999.1;Name=WP_058820999.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=SO06_RS11250;product=pyruvate/proton symporter BtsT;protein_id=WP_058820999.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 23225 23428 . + . ID=gene-SO06_RS11255;Name=SO06_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11255 NZ_MYDG01000007.1 Protein Homology CDS 23225 23428 . + 0 ID=cds-WP_000460616.1;Parent=gene-SO06_RS11255;Dbxref=GenBank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=SO06_RS11255;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 23439 24395 . + . ID=gene-SO06_RS11260;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=SO06_RS11260 NZ_MYDG01000007.1 Protein Homology CDS 23439 24395 . + 0 ID=cds-WP_001627709.1;Parent=gene-SO06_RS11260;Dbxref=GenBank:WP_001627709.1;Name=WP_001627709.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=SO06_RS11260;product=GTPase;protein_id=WP_001627709.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 24511 25479 . - . ID=gene-SO06_RS11265;Name=SO06_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11265 NZ_MYDG01000007.1 Protein Homology CDS 24511 25479 . - 0 ID=cds-WP_000452022.1;Parent=gene-SO06_RS11265;Dbxref=GenBank:WP_000452022.1;Name=WP_000452022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441751.1;locus_tag=SO06_RS11265;product=hypothetical protein;protein_id=WP_000452022.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 25621 28050 . + . ID=gene-SO06_RS11270;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=SO06_RS11270 NZ_MYDG01000007.1 Protein Homology CDS 25621 28050 . + 0 ID=cds-WP_000774451.1;Parent=gene-SO06_RS11270;Dbxref=GenBank:WP_000774451.1;Name=WP_000774451.1;Ontology_term=GO:0009307,GO:0003678,GO:0015666;gbkey=CDS;gene=hsdR;go_function=DNA helicase activity|0003678||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=SO06_RS11270;product=EcoAI/FtnUII family type I restriction enzme subunit R;protein_id=WP_000774451.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 28121 29590 . + . ID=gene-SO06_RS11275;Name=SO06_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11275 NZ_MYDG01000007.1 Protein Homology CDS 28121 29590 . + 0 ID=cds-WP_080204212.1;Parent=gene-SO06_RS11275;Dbxref=GenBank:WP_080204212.1;Name=WP_080204212.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313334.2;locus_tag=SO06_RS11275;product=N-6 DNA methylase;protein_id=WP_080204212.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 29590 31287 . + . ID=gene-SO06_RS11280;Name=SO06_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11280 NZ_MYDG01000007.1 Protein Homology CDS 29590 31287 . + 0 ID=cds-WP_080204213.1;Parent=gene-SO06_RS11280;Dbxref=GenBank:WP_080204213.1;Name=WP_080204213.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100194.1;locus_tag=SO06_RS11280;product=restriction endonuclease subunit S;protein_id=WP_080204213.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 31505 31825 . + . ID=gene-SO06_RS11285;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=SO06_RS11285 NZ_MYDG01000007.1 Protein Homology CDS 31505 31825 . + 0 ID=cds-WP_079801987.1;Parent=gene-SO06_RS11285;Dbxref=GenBank:WP_079801987.1;Name=WP_079801987.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551937.1;locus_tag=SO06_RS11285;product=endoribonuclease SymE;protein_id=WP_079801987.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 31870 33723 . - . ID=gene-SO06_RS11290;Name=SO06_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11290 NZ_MYDG01000007.1 Protein Homology CDS 31870 33723 . - 0 ID=cds-WP_080204214.1;Parent=gene-SO06_RS11290;Dbxref=GenBank:WP_080204214.1;Name=WP_080204214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102842.1;locus_tag=SO06_RS11290;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_080204214.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 33859 34779 . + . ID=gene-SO06_RS11295;Name=SO06_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11295 NZ_MYDG01000007.1 Protein Homology CDS 33859 34779 . + 0 ID=cds-WP_023231486.1;Parent=gene-SO06_RS11295;Dbxref=GenBank:WP_023231486.1;Name=WP_023231486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=SO06_RS11295;product=DUF5655 domain-containing protein;protein_id=WP_023231486.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 34856 35020 . - . ID=gene-SO06_RS11300;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=SO06_RS11300 NZ_MYDG01000007.1 Protein Homology CDS 34856 35020 . - 0 ID=cds-WP_000397916.1;Parent=gene-SO06_RS11300;Dbxref=GenBank:WP_000397916.1;Name=WP_000397916.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=SO06_RS11300;product=DUF1127 domain-containing protein YjiS;protein_id=WP_000397916.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 34987 35130 . + . ID=gene-SO06_RS11305;Name=SO06_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11305 NZ_MYDG01000007.1 Protein Homology CDS 34987 35130 . + 0 ID=cds-WP_001595639.1;Parent=gene-SO06_RS11305;Dbxref=GenBank:WP_001595639.1;Name=WP_001595639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=SO06_RS11305;product=hypothetical protein;protein_id=WP_001595639.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 35225 36595 . - . ID=gene-SO06_RS11310;Name=SO06_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11310 NZ_MYDG01000007.1 Protein Homology CDS 35225 36595 . - 0 ID=cds-WP_023231487.1;Parent=gene-SO06_RS11310;Dbxref=GenBank:WP_023231487.1;Name=WP_023231487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=SO06_RS11310;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_023231487.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 36776 37741 . - . ID=gene-SO06_RS11315;Name=SO06_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11315 NZ_MYDG01000007.1 Protein Homology CDS 36776 37741 . - 0 ID=cds-WP_000749991.1;Parent=gene-SO06_RS11315;Dbxref=GenBank:WP_000749991.1;Name=WP_000749991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=SO06_RS11315;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749991.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 38220 39461 . + . ID=gene-SO06_RS11320;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=SO06_RS11320 NZ_MYDG01000007.1 Protein Homology CDS 38220 39461 . + 0 ID=cds-WP_023181337.1;Parent=gene-SO06_RS11320;Dbxref=GenBank:WP_023181337.1;Name=WP_023181337.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=SO06_RS11320;product=multidrug efflux MFS transporter MdtM;protein_id=WP_023181337.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 39548 40819 . + . ID=gene-SO06_RS11325;Name=SO06_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11325 NZ_MYDG01000007.1 Protein Homology CDS 39548 40819 . + 0 ID=cds-WP_001033037.1;Parent=gene-SO06_RS11325;Dbxref=GenBank:WP_001033037.1;Name=WP_001033037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=SO06_RS11325;product=DUF445 domain-containing protein;protein_id=WP_001033037.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 41039 42223 . + . ID=gene-SO06_RS11330;Name=SO06_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11330 NZ_MYDG01000007.1 Protein Homology CDS 41039 42223 . + 0 ID=cds-WP_000233266.1;Parent=gene-SO06_RS11330;Dbxref=GenBank:WP_000233266.1;Name=WP_000233266.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=SO06_RS11330;product=MFS transporter;protein_id=WP_000233266.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 43096 43767 . + . ID=gene-SO06_RS11335;Name=SO06_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11335 NZ_MYDG01000007.1 Protein Homology CDS 43096 43767 . + 0 ID=cds-WP_000068752.1;Parent=gene-SO06_RS11335;Dbxref=GenBank:WP_000068752.1;Name=WP_000068752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=SO06_RS11335;product=nucleoside recognition domain-containing protein;protein_id=WP_000068752.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 43764 44225 . + . ID=gene-SO06_RS11340;Name=SO06_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11340 NZ_MYDG01000007.1 Protein Homology CDS 43764 44225 . + 0 ID=cds-WP_000211979.1;Parent=gene-SO06_RS11340;Dbxref=GenBank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=SO06_RS11340;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 44238 45410 . + . ID=gene-SO06_RS11345;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=SO06_RS11345 NZ_MYDG01000007.1 Protein Homology CDS 44238 45410 . + 0 ID=cds-WP_021294479.1;Parent=gene-SO06_RS11345;Dbxref=GenBank:WP_021294479.1;Name=WP_021294479.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=SO06_RS11345;product=beta-aspartyl-peptidase;protein_id=WP_021294479.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 45529 46437 . + . ID=gene-SO06_RS11350;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=SO06_RS11350 NZ_MYDG01000007.1 Protein Homology CDS 45529 46437 . + 0 ID=cds-WP_000383509.1;Parent=gene-SO06_RS11350;Dbxref=GenBank:WP_000383509.1;Name=WP_000383509.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=SO06_RS11350;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383509.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 46443 47177 . - . ID=gene-SO06_RS11355;Name=SO06_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11355 NZ_MYDG01000007.1 Protein Homology CDS 46443 47177 . - 0 ID=cds-WP_000683247.1;Parent=gene-SO06_RS11355;Dbxref=GenBank:WP_000683247.1;Name=WP_000683247.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=SO06_RS11355;product=aspartate/glutamate racemase family protein;protein_id=WP_000683247.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 47416 47946 . - . ID=gene-SO06_RS11365;Name=SO06_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11365 NZ_MYDG01000007.1 Protein Homology CDS 47416 47946 . - 0 ID=cds-WP_000907671.1;Parent=gene-SO06_RS11365;Dbxref=GenBank:WP_000907671.1;Name=WP_000907671.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=SO06_RS11365;product=Hcp family type VI secretion system effector;protein_id=WP_000907671.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 48663 49676 . + . ID=gene-SO06_RS11370;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=SO06_RS11370 NZ_MYDG01000007.1 Protein Homology CDS 48663 49676 . + 0 ID=cds-WP_023231488.1;Parent=gene-SO06_RS11370;Dbxref=GenBank:WP_023231488.1;Name=WP_023231488.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=SO06_RS11370;product=tryptophan--tRNA ligase;protein_id=WP_023231488.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 49677 50450 . - . ID=gene-SO06_RS11375;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=SO06_RS11375 NZ_MYDG01000007.1 Protein Homology CDS 49677 50450 . - 0 ID=cds-WP_000841654.1;Parent=gene-SO06_RS11375;Dbxref=GenBank:WP_000841654.1;Name=WP_000841654.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=SO06_RS11375;product=Uxu operon transcriptional regulator;protein_id=WP_000841654.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 50800 51474 . + . ID=gene-SO06_RS11385;Name=SO06_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11385 NZ_MYDG01000007.1 Protein Homology CDS 50800 51474 . + 0 ID=cds-WP_000588698.1;Parent=gene-SO06_RS11385;Dbxref=GenBank:WP_000588698.1;Name=WP_000588698.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=SO06_RS11385;product=dienelactone hydrolase family protein;protein_id=WP_000588698.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 51471 51932 . - . ID=gene-SO06_RS11390;Name=SO06_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11390 NZ_MYDG01000007.1 Protein Homology CDS 51471 51932 . - 0 ID=cds-WP_023231489.1;Parent=gene-SO06_RS11390;Dbxref=GenBank:WP_023231489.1;Name=WP_023231489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=SO06_RS11390;product=DUF302 domain-containing protein;protein_id=WP_023231489.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 52137 53048 . - . ID=gene-SO06_RS11395;Name=SO06_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11395 NZ_MYDG01000007.1 Protein Homology CDS 52137 53048 . - 0 ID=cds-WP_023203351.1;Parent=gene-SO06_RS11395;Dbxref=GenBank:WP_023203351.1;Name=WP_023203351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=SO06_RS11395;product=STM4504/CBY_0614 family protein;protein_id=WP_023203351.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 53324 54319 . - . ID=gene-SO06_RS11400;Name=SO06_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11400 NZ_MYDG01000007.1 Protein Homology CDS 53324 54319 . - 0 ID=cds-WP_023231490.1;Parent=gene-SO06_RS11400;Dbxref=GenBank:WP_023231490.1;Name=WP_023231490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001240361.1;locus_tag=SO06_RS11400;product=endonuclease NucS domain-containing protein;protein_id=WP_023231490.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 54572 55180 . - . ID=gene-SO06_RS11405;Name=SO06_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11405 NZ_MYDG01000007.1 Protein Homology CDS 54572 55180 . - 0 ID=cds-WP_001727634.1;Parent=gene-SO06_RS11405;Dbxref=GenBank:WP_001727634.1;Name=WP_001727634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=SO06_RS11405;product=DUF1062 domain-containing protein;protein_id=WP_001727634.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 55668 55925 . + . ID=gene-SO06_RS11415;Name=SO06_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11415 NZ_MYDG01000007.1 Protein Homology CDS 55668 55925 . + 0 ID=cds-WP_001054380.1;Parent=gene-SO06_RS11415;Dbxref=GenBank:WP_001054380.1;Name=WP_001054380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=SO06_RS11415;product=YjhX family toxin;protein_id=WP_001054380.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 55930 57561 . + . ID=gene-SO06_RS11420;Name=SO06_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11420 NZ_MYDG01000007.1 Protein Homology CDS 55930 57561 . + 0 ID=cds-WP_080204215.1;Parent=gene-SO06_RS11420;Dbxref=GenBank:WP_080204215.1;Name=WP_080204215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=SO06_RS11420;product=class I SAM-dependent methyltransferase;protein_id=WP_080204215.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 58120 58836 . + . ID=gene-SO06_RS11430;Name=SO06_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11430 NZ_MYDG01000007.1 Protein Homology CDS 58120 58836 . + 0 ID=cds-WP_000532939.1;Parent=gene-SO06_RS11430;Dbxref=GenBank:WP_000532939.1;Name=WP_000532939.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=SO06_RS11430;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532939.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 59316 60191 . - . ID=gene-SO06_RS11440;Name=SO06_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11440 NZ_MYDG01000007.1 Protein Homology CDS 59316 60191 . - 0 ID=cds-WP_080204217.1;Parent=gene-SO06_RS11440;Dbxref=GenBank:WP_080204217.1;Name=WP_080204217.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=SO06_RS11440;product=phosphorothioated DNA-binding restriction endonuclease;protein_id=WP_080204217.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 60544 60966 . - . ID=gene-SO06_RS11445;Name=SO06_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11445 NZ_MYDG01000007.1 Protein Homology CDS 60544 60966 . - 0 ID=cds-WP_000941934.1;Parent=gene-SO06_RS11445;Dbxref=GenBank:WP_000941934.1;Name=WP_000941934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000941934.1;locus_tag=SO06_RS11445;product=fosfomycin resistance glutathione transferase FosA7;protein_id=WP_000941934.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 61090 61257 . + . ID=gene-SO06_RS25270;Name=SO06_RS25270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25270 NZ_MYDG01000007.1 GeneMarkS-2+ CDS 61090 61257 . + 0 ID=cds-WP_153676275.1;Parent=gene-SO06_RS25270;Dbxref=GenBank:WP_153676275.1;Name=WP_153676275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS25270;product=hypothetical protein;protein_id=WP_153676275.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 61399 63516 . - . ID=gene-SO06_RS11450;Name=SO06_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11450 NZ_MYDG01000007.1 Protein Homology CDS 61399 63516 . - 0 ID=cds-WP_023216492.1;Parent=gene-SO06_RS11450;Dbxref=GenBank:WP_023216492.1;Name=WP_023216492.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155072.1;locus_tag=SO06_RS11450;product=ATP-dependent helicase;protein_id=WP_023216492.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 63513 69854 . - . ID=gene-SO06_RS11455;Name=SO06_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11455 NZ_MYDG01000007.1 Protein Homology CDS 63513 69854 . - 0 ID=cds-WP_080204218.1;Parent=gene-SO06_RS11455;Dbxref=GenBank:WP_080204218.1;Name=WP_080204218.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313290.1;locus_tag=SO06_RS11455;product=DEAD/DEAH box helicase;protein_id=WP_080204218.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 69854 74788 . - . ID=gene-SO06_RS11460;Name=SO06_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11460 NZ_MYDG01000007.1 Protein Homology CDS 69854 74788 . - 0 ID=cds-WP_023231498.1;Parent=gene-SO06_RS11460;Dbxref=GenBank:WP_023231498.1;Name=WP_023231498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313289.1;locus_tag=SO06_RS11460;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_023231498.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 74791 77649 . - . ID=gene-SO06_RS11465;Name=SO06_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11465 NZ_MYDG01000007.1 Protein Homology CDS 74791 77649 . - 0 ID=cds-WP_048349006.1;Parent=gene-SO06_RS11465;Dbxref=GenBank:WP_048349006.1;Name=WP_048349006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313288.2;locus_tag=SO06_RS11465;product=DEAD/DEAH box helicase;protein_id=WP_048349006.1;transl_table=11 NZ_MYDG01000007.1 RefSeq pseudogene 78267 79046 . - . ID=gene-SO06_RS11470;Name=SO06_RS11470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS11470;pseudo=true NZ_MYDG01000007.1 Protein Homology CDS 78267 79046 . - 0 ID=cds-SO06_RS11470;Parent=gene-SO06_RS11470;Note=internal stop;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737308.1;locus_tag=SO06_RS11470;product=HNH endonuclease;pseudo=true;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 79207 79521 . + . ID=gene-SO06_RS11475;Name=SO06_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11475 NZ_MYDG01000007.1 Protein Homology CDS 79207 79521 . + 0 ID=cds-WP_023232245.1;Parent=gene-SO06_RS11475;Dbxref=GenBank:WP_023232245.1;Name=WP_023232245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936735.1;locus_tag=SO06_RS11475;product=hypothetical protein;protein_id=WP_023232245.1;transl_table=11 NZ_MYDG01000007.1 RefSeq pseudogene 79501 79808 . - . ID=gene-SO06_RS11480;Name=SO06_RS11480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS11480;pseudo=true NZ_MYDG01000007.1 Protein Homology CDS 79501 79808 . - 0 ID=cds-SO06_RS11480;Parent=gene-SO06_RS11480;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463347.1;locus_tag=SO06_RS11480;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 80243 80551 . - . ID=gene-SO06_RS11485;Name=SO06_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11485 NZ_MYDG01000007.1 Protein Homology CDS 80243 80551 . - 0 ID=cds-WP_001199743.1;Parent=gene-SO06_RS11485;Dbxref=GenBank:WP_001199743.1;Name=WP_001199743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199743.1;locus_tag=SO06_RS11485;product=CcdB family protein;protein_id=WP_001199743.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 80554 80793 . - . ID=gene-SO06_RS11490;Name=SO06_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11490 NZ_MYDG01000007.1 Protein Homology CDS 80554 80793 . - 0 ID=cds-WP_000016244.1;Parent=gene-SO06_RS11490;Dbxref=GenBank:WP_000016244.1;Name=WP_000016244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118105.1;locus_tag=SO06_RS11490;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_000016244.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 80906 81154 . - . ID=gene-SO06_RS11495;Name=SO06_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11495 NZ_MYDG01000007.1 Protein Homology CDS 80906 81154 . - 0 ID=cds-WP_000168385.1;Parent=gene-SO06_RS11495;Dbxref=GenBank:WP_000168385.1;Name=WP_000168385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168389.1;locus_tag=SO06_RS11495;product=CopG family ribbon-helix-helix protein;protein_id=WP_000168385.1;transl_table=11 NZ_MYDG01000007.1 RefSeq pseudogene 81231 81539 . - . ID=gene-SO06_RS11500;Name=SO06_RS11500;end_range=81539,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS11500;partial=true;pseudo=true NZ_MYDG01000007.1 Protein Homology CDS 81231 81539 . - 0 ID=cds-SO06_RS11500;Parent=gene-SO06_RS11500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=81539,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=SO06_RS11500;partial=true;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 81559 82536 . - . ID=gene-SO06_RS11505;Name=SO06_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11505 NZ_MYDG01000007.1 Protein Homology CDS 81559 82536 . - 0 ID=cds-WP_223156438.1;Parent=gene-SO06_RS11505;Dbxref=GenBank:WP_223156438.1;Name=WP_223156438.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041206064.1;locus_tag=SO06_RS11505;product=IS630 family transposase;protein_id=WP_223156438.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 82987 83071 . - . ID=gene-SO06_RS11510;Name=SO06_RS11510;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS11510 NZ_MYDG01000007.1 tRNAscan-SE tRNA 82987 83071 . - . ID=rna-SO06_RS11510;Parent=gene-SO06_RS11510;anticodon=(pos:complement(83035..83037));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS11510;product=tRNA-Leu NZ_MYDG01000007.1 tRNAscan-SE exon 82987 83071 . - . ID=exon-SO06_RS11510-1;Parent=rna-SO06_RS11510;anticodon=(pos:complement(83035..83037));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS11510;product=tRNA-Leu NZ_MYDG01000007.1 RefSeq gene 83294 84313 . + . ID=gene-SO06_RS11515;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=SO06_RS11515 NZ_MYDG01000007.1 Protein Homology CDS 83294 84313 . + 0 ID=cds-WP_000152563.1;Parent=gene-SO06_RS11515;Dbxref=GenBank:WP_000152563.1;Name=WP_000152563.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=SO06_RS11515;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_000152563.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 84341 84871 . - . ID=gene-SO06_RS11520;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=SO06_RS11520 NZ_MYDG01000007.1 Protein Homology CDS 84341 84871 . - 0 ID=cds-WP_000896756.1;Parent=gene-SO06_RS11520;Dbxref=GenBank:WP_000896756.1;Name=WP_000896756.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=SO06_RS11520;product=gluconokinase;protein_id=WP_000896756.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 85088 86119 . + . ID=gene-SO06_RS11525;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=SO06_RS11525 NZ_MYDG01000007.1 Protein Homology CDS 85088 86119 . + 0 ID=cds-WP_000453354.1;Parent=gene-SO06_RS11525;Dbxref=GenBank:WP_000453354.1;Name=WP_000453354.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=SO06_RS11525;product=L-idonate 5-dehydrogenase;protein_id=WP_000453354.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 86144 86908 . + . ID=gene-SO06_RS11530;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=SO06_RS11530 NZ_MYDG01000007.1 Protein Homology CDS 86144 86908 . + 0 ID=cds-WP_000998688.1;Parent=gene-SO06_RS11530;Dbxref=GenBank:WP_000998688.1;Name=WP_000998688.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=SO06_RS11530;product=gluconate 5-dehydrogenase;protein_id=WP_000998688.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 86970 88289 . + . ID=gene-SO06_RS11535;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=SO06_RS11535 NZ_MYDG01000007.1 Protein Homology CDS 86970 88289 . + 0 ID=cds-WP_001128356.1;Parent=gene-SO06_RS11535;Dbxref=GenBank:WP_001128356.1;Name=WP_001128356.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=SO06_RS11535;product=gnt-II system L-idonate transporter;protein_id=WP_001128356.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 88353 89351 . + . ID=gene-SO06_RS11540;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=SO06_RS11540 NZ_MYDG01000007.1 Protein Homology CDS 88353 89351 . + 0 ID=cds-WP_001244065.1;Parent=gene-SO06_RS11540;Dbxref=GenBank:WP_001244065.1;Name=WP_001244065.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=SO06_RS11540;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001244065.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 89547 90629 . - . ID=gene-SO06_RS11545;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=SO06_RS11545 NZ_MYDG01000007.1 Protein Homology CDS 89547 90629 . - 0 ID=cds-WP_001182242.1;Parent=gene-SO06_RS11545;Dbxref=GenBank:WP_001182242.1;Name=WP_001182242.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=SO06_RS11545;product=LPS export ABC transporter permease LptG;protein_id=WP_001182242.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 90629 91729 . - . ID=gene-SO06_RS11550;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=SO06_RS11550 NZ_MYDG01000007.1 Protein Homology CDS 90629 91729 . - 0 ID=cds-WP_000584132.1;Parent=gene-SO06_RS11550;Dbxref=GenBank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=SO06_RS11550;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 91793 91843 . - . ID=gene-SO06_RS25355;Name=SO06_RS25355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25355 NZ_MYDG01000007.1 Protein Homology CDS 91793 91843 . - 0 ID=cds-WP_212724070.1;Parent=gene-SO06_RS25355;Dbxref=GenBank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=SO06_RS25355;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 92124 93635 . + . ID=gene-SO06_RS11565;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=SO06_RS11565 NZ_MYDG01000007.1 Protein Homology CDS 92124 93635 . + 0 ID=cds-WP_000397158.1;Parent=gene-SO06_RS11565;Dbxref=GenBank:WP_000397158.1;Name=WP_000397158.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=SO06_RS11565;product=leucyl aminopeptidase;protein_id=WP_000397158.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 93772 94215 . + . ID=gene-SO06_RS11570;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=SO06_RS11570 NZ_MYDG01000007.1 Protein Homology CDS 93772 94215 . + 0 ID=cds-WP_023194710.1;Parent=gene-SO06_RS11570;Dbxref=GenBank:WP_023194710.1;Name=WP_023194710.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=SO06_RS11570;product=DNA polymerase III subunit chi;protein_id=WP_023194710.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 94215 97070 . + . ID=gene-SO06_RS11575;Name=SO06_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11575 NZ_MYDG01000007.1 Protein Homology CDS 94215 97070 . + 0 ID=cds-WP_080204219.1;Parent=gene-SO06_RS11575;Dbxref=GenBank:WP_080204219.1;Name=WP_080204219.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=SO06_RS11575;product=valine--tRNA ligase;protein_id=WP_080204219.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 97212 98399 . - . ID=gene-SO06_RS11580;Name=SO06_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11580 NZ_MYDG01000007.1 Protein Homology CDS 97212 98399 . - 0 ID=cds-WP_001066975.1;Parent=gene-SO06_RS11580;Dbxref=GenBank:WP_001066975.1;Name=WP_001066975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=SO06_RS11580;product=YjgN family protein;protein_id=WP_001066975.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 98594 99097 . + . ID=gene-SO06_RS11585;Name=SO06_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11585 NZ_MYDG01000007.1 Protein Homology CDS 98594 99097 . + 0 ID=cds-WP_001519079.1;Parent=gene-SO06_RS11585;Dbxref=GenBank:WP_001519079.1;Name=WP_001519079.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=SO06_RS11585;product=GNAT family N-acetyltransferase;protein_id=WP_001519079.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 99204 99692 . + . ID=gene-SO06_RS11590;Name=SO06_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11590 NZ_MYDG01000007.1 Protein Homology CDS 99204 99692 . + 0 ID=cds-WP_000826193.1;Parent=gene-SO06_RS11590;Dbxref=GenBank:WP_000826193.1;Name=WP_000826193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=SO06_RS11590;product=DUF3617 domain-containing protein;protein_id=WP_000826193.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 99771 99893 . + . ID=gene-SO06_RS25555;Name=SO06_RS25555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25555 NZ_MYDG01000007.1 GeneMarkS-2+ CDS 99771 99893 . + 0 ID=cds-WP_001575365.1;Parent=gene-SO06_RS25555;Dbxref=GenBank:WP_001575365.1;Name=WP_001575365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS25555;product=hypothetical protein;protein_id=WP_001575365.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 99926 100738 . - . ID=gene-SO06_RS11595;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=SO06_RS11595 NZ_MYDG01000007.1 Protein Homology CDS 99926 100738 . - 0 ID=cds-WP_000218452.1;Parent=gene-SO06_RS11595;Dbxref=GenBank:WP_000218452.1;Name=WP_000218452.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=SO06_RS11595;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_000218452.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 100750 101166 . - . ID=gene-SO06_RS11600;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=SO06_RS11600 NZ_MYDG01000007.1 Protein Homology CDS 100750 101166 . - 0 ID=cds-WP_000002940.1;Parent=gene-SO06_RS11600;Dbxref=GenBank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=SO06_RS11600;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 101267 101362 . + . ID=gene-SO06_RS25780;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=SO06_RS25780 NZ_MYDG01000007.1 Protein Homology CDS 101267 101362 . + 0 ID=cds-WP_223165954.1;Parent=gene-SO06_RS25780;Dbxref=GenBank:WP_223165954.1;Name=WP_223165954.1;gbkey=CDS;gene=argL;inference=COORDINATES: protein motif:HMM:NF047283.2;locus_tag=SO06_RS25780;product=putative translational regulatory protein ArgL;protein_id=WP_223165954.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 101332 102336 . + . ID=gene-SO06_RS11605;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=SO06_RS11605 NZ_MYDG01000007.1 Protein Homology CDS 101332 102336 . + 0 ID=cds-WP_023216480.1;Parent=gene-SO06_RS11605;Dbxref=GenBank:WP_023216480.1;Name=WP_023216480.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=SO06_RS11605;product=ornithine carbamoyltransferase;protein_id=WP_023216480.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 102410 102862 . - . ID=gene-SO06_RS11610;Name=SO06_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11610 NZ_MYDG01000007.1 Protein Homology CDS 102410 102862 . - 0 ID=cds-WP_023216479.1;Parent=gene-SO06_RS11610;Dbxref=GenBank:WP_023216479.1;Name=WP_023216479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=SO06_RS11610;product=YhcH/YjgK/YiaL family protein;protein_id=WP_023216479.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 103538 104758 . + . ID=gene-SO06_RS11620;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=SO06_RS11620 NZ_MYDG01000007.1 Protein Homology CDS 103538 104758 . + 0 ID=cds-WP_000410846.1;Parent=gene-SO06_RS11620;Dbxref=GenBank:WP_000410846.1;Name=WP_000410846.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=SO06_RS11620;product=arginine deiminase;protein_id=WP_000410846.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 104769 105701 . + . ID=gene-SO06_RS11625;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=SO06_RS11625 NZ_MYDG01000007.1 Protein Homology CDS 104769 105701 . + 0 ID=cds-WP_023232252.1;Parent=gene-SO06_RS11625;Dbxref=GenBank:WP_023232252.1;Name=WP_023232252.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=SO06_RS11625;product=carbamate kinase;protein_id=WP_023232252.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 105813 106817 . + . ID=gene-SO06_RS11630;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=SO06_RS11630 NZ_MYDG01000007.1 Protein Homology CDS 105813 106817 . + 0 ID=cds-WP_023232253.1;Parent=gene-SO06_RS11630;Dbxref=GenBank:WP_023232253.1;Name=WP_023232253.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=SO06_RS11630;product=ornithine carbamoyltransferase;protein_id=WP_023232253.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 106873 108276 . + . ID=gene-SO06_RS11635;Name=SO06_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11635 NZ_MYDG01000007.1 Protein Homology CDS 106873 108276 . + 0 ID=cds-WP_000514435.1;Parent=gene-SO06_RS11635;Dbxref=GenBank:WP_000514435.1;Name=WP_000514435.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=SO06_RS11635;product=YfcC family protein;protein_id=WP_000514435.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 108462 108950 . + . ID=gene-SO06_RS11640;Name=SO06_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11640 NZ_MYDG01000007.1 Protein Homology CDS 108462 108950 . + 0 ID=cds-WP_000666051.1;Parent=gene-SO06_RS11640;Dbxref=GenBank:WP_000666051.1;Name=WP_000666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=SO06_RS11640;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11 NZ_MYDG01000007.1 RefSeq pseudogene 108920 109061 . - . ID=gene-SO06_RS11645;Name=SO06_RS11645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS11645;pseudo=true NZ_MYDG01000007.1 Protein Homology CDS 108920 109061 . - 0 ID=cds-SO06_RS11645;Parent=gene-SO06_RS11645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=SO06_RS11645;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 109041 109142 . + . ID=gene-SO06_RS11650;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=SO06_RS11650 NZ_MYDG01000007.1 Protein Homology CDS 109041 109142 . + 0 ID=cds-WP_000249504.1;Parent=gene-SO06_RS11650;Dbxref=GenBank:WP_000249504.1;Name=WP_000249504.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=SO06_RS11650;product=pyr operon leader peptide;protein_id=WP_000249504.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 109178 110113 . + . ID=gene-SO06_RS11655;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=SO06_RS11655 NZ_MYDG01000007.1 Protein Homology CDS 109178 110113 . + 0 ID=cds-WP_023232254.1;Parent=gene-SO06_RS11655;Dbxref=GenBank:WP_023232254.1;Name=WP_023232254.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=SO06_RS11655;product=aspartate carbamoyltransferase;protein_id=WP_023232254.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 110126 110587 . + . ID=gene-SO06_RS11660;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=SO06_RS11660 NZ_MYDG01000007.1 Protein Homology CDS 110126 110587 . + 0 ID=cds-WP_000148567.1;Parent=gene-SO06_RS11660;Dbxref=GenBank:WP_000148567.1;Name=WP_000148567.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=SO06_RS11660;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148567.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 110664 111050 . + . ID=gene-SO06_RS11665;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=SO06_RS11665 NZ_MYDG01000007.1 Protein Homology CDS 110664 111050 . + 0 ID=cds-WP_000047544.1;Parent=gene-SO06_RS11665;Dbxref=GenBank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=SO06_RS11665;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 111125 111571 . + . ID=gene-SO06_RS11670;Name=SO06_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11670 NZ_MYDG01000007.1 Protein Homology CDS 111125 111571 . + 0 ID=cds-WP_000252555.1;Parent=gene-SO06_RS11670;Dbxref=GenBank:WP_000252555.1;Name=WP_000252555.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=SO06_RS11670;product=transposase;protein_id=WP_000252555.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 111687 114395 . - . ID=gene-SO06_RS11675;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=SO06_RS11675 NZ_MYDG01000007.1 Protein Homology CDS 111687 114395 . - 0 ID=cds-WP_000920862.1;Parent=gene-SO06_RS11675;Dbxref=GenBank:WP_000920862.1;Name=WP_000920862.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=SO06_RS11675;product=magnesium-translocating P-type ATPase;protein_id=WP_000920862.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 114536 114634 . - . ID=gene-SO06_RS25700;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=SO06_RS25700 NZ_MYDG01000007.1 Protein Homology CDS 114536 114634 . - 0 ID=cds-WP_105789234.1;Parent=gene-SO06_RS25700;Dbxref=GenBank:WP_105789234.1;Name=WP_105789234.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=SO06_RS25700;product=mgtA regulatory leader peptide MgtL;protein_id=WP_105789234.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 114779 115726 . + . ID=gene-SO06_RS11680;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=SO06_RS11680 NZ_MYDG01000007.1 Protein Homology CDS 114779 115726 . + 0 ID=cds-WP_001181297.1;Parent=gene-SO06_RS11680;Dbxref=GenBank:WP_001181297.1;Name=WP_001181297.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=SO06_RS11680;product=trehalose operon repressor TreR;protein_id=WP_001181297.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 115864 117282 . + . ID=gene-SO06_RS11685;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=SO06_RS11685 NZ_MYDG01000007.1 Protein Homology CDS 115864 117282 . + 0 ID=cds-WP_023232255.1;Parent=gene-SO06_RS11685;Dbxref=GenBank:WP_023232255.1;Name=WP_023232255.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=SO06_RS11685;product=PTS trehalose transporter subunit IIBC;protein_id=WP_023232255.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 117332 118984 . + . ID=gene-SO06_RS11690;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=SO06_RS11690 NZ_MYDG01000007.1 Protein Homology CDS 117332 118984 . + 0 ID=cds-WP_023232256.1;Parent=gene-SO06_RS11690;Dbxref=GenBank:WP_023232256.1;Name=WP_023232256.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=SO06_RS11690;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_023232256.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 119393 121531 . + . ID=gene-SO06_RS11695;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=SO06_RS11695 NZ_MYDG01000007.1 Protein Homology CDS 119393 121531 . + 0 ID=cds-WP_000187818.1;Parent=gene-SO06_RS11695;Dbxref=GenBank:WP_000187818.1;Name=WP_000187818.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=SO06_RS11695;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187818.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 121652 122116 . + . ID=gene-SO06_RS11700;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=SO06_RS11700 NZ_MYDG01000007.1 Protein Homology CDS 121652 122116 . + 0 ID=cds-WP_023232257.1;Parent=gene-SO06_RS11700;Dbxref=GenBank:WP_023232257.1;Name=WP_023232257.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=SO06_RS11700;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_023232257.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 122283 122513 . + . ID=gene-SO06_RS11705;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=SO06_RS11705 NZ_MYDG01000007.1 Protein Homology CDS 122283 122513 . + 0 ID=cds-WP_001261294.1;Parent=gene-SO06_RS11705;Dbxref=GenBank:WP_001261294.1;Name=WP_001261294.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1;locus_tag=SO06_RS11705;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_001261294.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 122510 122926 . + . ID=gene-SO06_RS11710;Name=SO06_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11710 NZ_MYDG01000007.1 Protein Homology CDS 122510 122926 . + 0 ID=cds-WP_000048134.1;Parent=gene-SO06_RS11710;Dbxref=GenBank:WP_000048134.1;Name=WP_000048134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229630.1;locus_tag=SO06_RS11710;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_000048134.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 122987 124900 . - . ID=gene-SO06_RS11715;Name=SO06_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11715 NZ_MYDG01000007.1 Protein Homology CDS 122987 124900 . - 0 ID=cds-WP_023232258.1;Parent=gene-SO06_RS11715;Dbxref=GenBank:WP_023232258.1;Name=WP_023232258.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=SO06_RS11715;product=BglG family transcription antiterminator;protein_id=WP_023232258.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 124917 125657 . - . ID=gene-SO06_RS11720;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=SO06_RS11720 NZ_MYDG01000007.1 Protein Homology CDS 124917 125657 . - 0 ID=cds-WP_023229489.1;Parent=gene-SO06_RS11720;Dbxref=GenBank:WP_023229489.1;Name=WP_023229489.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=SO06_RS11720;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_023229489.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 125654 126772 . - . ID=gene-SO06_RS11725;Name=SO06_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11725 NZ_MYDG01000007.1 Protein Homology CDS 125654 126772 . - 0 ID=cds-WP_023232259.1;Parent=gene-SO06_RS11725;Dbxref=GenBank:WP_023232259.1;Name=WP_023232259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=SO06_RS11725;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_023232259.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 126756 127889 . - . ID=gene-SO06_RS11730;Name=SO06_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11730 NZ_MYDG01000007.1 Protein Homology CDS 126756 127889 . - 0 ID=cds-WP_023232260.1;Parent=gene-SO06_RS11730;Dbxref=GenBank:WP_023232260.1;Name=WP_023232260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=SO06_RS11730;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_023232260.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 127948 128592 . - . ID=gene-SO06_RS11735;Name=SO06_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11735 NZ_MYDG01000007.1 Protein Homology CDS 127948 128592 . - 0 ID=cds-WP_000392127.1;Parent=gene-SO06_RS11735;Dbxref=GenBank:WP_000392127.1;Name=WP_000392127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=SO06_RS11735;product=DUF4310 family protein;protein_id=WP_000392127.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 128604 129380 . - . ID=gene-SO06_RS11740;Name=SO06_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11740 NZ_MYDG01000007.1 Protein Homology CDS 128604 129380 . - 0 ID=cds-WP_000478578.1;Parent=gene-SO06_RS11740;Dbxref=GenBank:WP_000478578.1;Name=WP_000478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=SO06_RS11740;product=DUF4311 domain-containing protein;protein_id=WP_000478578.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 129403 129705 . - . ID=gene-SO06_RS11745;Name=SO06_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11745 NZ_MYDG01000007.1 Protein Homology CDS 129403 129705 . - 0 ID=cds-WP_000975187.1;Parent=gene-SO06_RS11745;Dbxref=GenBank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=SO06_RS11745;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 129705 130067 . - . ID=gene-SO06_RS11750;Name=SO06_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11750 NZ_MYDG01000007.1 Protein Homology CDS 129705 130067 . - 0 ID=cds-WP_000435389.1;Parent=gene-SO06_RS11750;Dbxref=GenBank:WP_000435389.1;Name=WP_000435389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=SO06_RS11750;product=SFCGS family glycine-rich protein;protein_id=WP_000435389.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 130078 130416 . - . ID=gene-SO06_RS11755;Name=SO06_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11755 NZ_MYDG01000007.1 Protein Homology CDS 130078 130416 . - 0 ID=cds-WP_001255103.1;Parent=gene-SO06_RS11755;Dbxref=GenBank:WP_001255103.1;Name=WP_001255103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=SO06_RS11755;product=glycine dehydrogenase;protein_id=WP_001255103.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 130704 131090 . - . ID=gene-SO06_RS11760;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=SO06_RS11760 NZ_MYDG01000007.1 Protein Homology CDS 130704 131090 . - 0 ID=cds-WP_001232231.1;Parent=gene-SO06_RS11760;Dbxref=GenBank:WP_001232231.1;Name=WP_001232231.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=SO06_RS11760;product=cytochrome b562;protein_id=WP_001232231.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 131189 132541 . - . ID=gene-SO06_RS11765;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=SO06_RS11765 NZ_MYDG01000007.1 Protein Homology CDS 131189 132541 . - 0 ID=cds-WP_000852994.1;Parent=gene-SO06_RS11765;Dbxref=GenBank:WP_000852994.1;Name=WP_000852994.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=SO06_RS11765;product=metalloprotease PmbA;protein_id=WP_000852994.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 132638 133189 . + . ID=gene-SO06_RS11770;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=SO06_RS11770 NZ_MYDG01000007.1 Protein Homology CDS 132638 133189 . + 0 ID=cds-WP_000166287.1;Parent=gene-SO06_RS11770;Dbxref=GenBank:WP_000166287.1;Name=WP_000166287.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=SO06_RS11770;product=ribosome biogenesis factor YjgA;protein_id=WP_000166287.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 133245 134129 . - . ID=gene-SO06_RS11775;Name=iolH;gbkey=Gene;gene=iolH;gene_biotype=protein_coding;locus_tag=SO06_RS11775 NZ_MYDG01000007.1 Protein Homology CDS 133245 134129 . - 0 ID=cds-WP_000683955.1;Parent=gene-SO06_RS11775;Dbxref=GenBank:WP_000683955.1;Name=WP_000683955.1;gbkey=CDS;gene=iolH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463297.1;locus_tag=SO06_RS11775;product=sugar phosphate isomerase/epimerase IolH;protein_id=WP_000683955.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 134182 134997 . - . ID=gene-SO06_RS11780;Name=iolI2;gbkey=Gene;gene=iolI2;gene_biotype=protein_coding;locus_tag=SO06_RS11780 NZ_MYDG01000007.1 Protein Homology CDS 134182 134997 . - 0 ID=cds-WP_001019386.1;Parent=gene-SO06_RS11780;Dbxref=GenBank:WP_001019386.1;Name=WP_001019386.1;gbkey=CDS;gene=iolI2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463296.1;locus_tag=SO06_RS11780;product=2-keto-myo-inositol isomerase IolI2;protein_id=WP_001019386.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 135158 136384 . - . ID=gene-SO06_RS11785;Name=SO06_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11785 NZ_MYDG01000007.1 Protein Homology CDS 135158 136384 . - 0 ID=cds-WP_000661780.1;Parent=gene-SO06_RS11785;Dbxref=GenBank:WP_000661780.1;Name=WP_000661780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463295.1;locus_tag=SO06_RS11785;product=MFS transporter;protein_id=WP_000661780.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 136457 137479 . - . ID=gene-SO06_RS11790;Name=iolG2;gbkey=Gene;gene=iolG2;gene_biotype=protein_coding;locus_tag=SO06_RS11790 NZ_MYDG01000007.1 Protein Homology CDS 136457 137479 . - 0 ID=cds-WP_000736098.1;Parent=gene-SO06_RS11790;Dbxref=GenBank:WP_000736098.1;Name=WP_000736098.1;gbkey=CDS;gene=iolG2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463294.1;locus_tag=SO06_RS11790;product=D-chiro-inositol-2-dehydrogenase IolG2;protein_id=WP_000736098.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 137660 139600 . - . ID=gene-SO06_RS11795;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=SO06_RS11795 NZ_MYDG01000007.1 Protein Homology CDS 137660 139600 . - 0 ID=cds-WP_000849477.1;Parent=gene-SO06_RS11795;Dbxref=GenBank:WP_000849477.1;Name=WP_000849477.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453702.1;locus_tag=SO06_RS11795;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_000849477.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 140017 141954 . + . ID=gene-SO06_RS11800;Name=SO06_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11800 NZ_MYDG01000007.1 Protein Homology CDS 140017 141954 . + 0 ID=cds-WP_014343940.1;Parent=gene-SO06_RS11800;Dbxref=GenBank:WP_014343940.1;Name=WP_014343940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453701.1;locus_tag=SO06_RS11800;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_014343940.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 142015 143181 . + . ID=gene-SO06_RS11805;Name=SO06_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11805 NZ_MYDG01000007.1 Protein Homology CDS 142015 143181 . + 0 ID=cds-WP_001111176.1;Parent=gene-SO06_RS11805;Dbxref=GenBank:WP_001111176.1;Name=WP_001111176.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463289.1;locus_tag=SO06_RS11805;product=MFS transporter;protein_id=WP_001111176.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 143178 144011 . - . ID=gene-SO06_RS11810;Name=iolI1;gbkey=Gene;gene=iolI1;gene_biotype=protein_coding;locus_tag=SO06_RS11810 NZ_MYDG01000007.1 Protein Homology CDS 143178 144011 . - 0 ID=cds-WP_000976927.1;Parent=gene-SO06_RS11810;Dbxref=GenBank:WP_000976927.1;Name=WP_000976927.1;gbkey=CDS;gene=iolI1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463288.1;locus_tag=SO06_RS11810;product=2-keto-myo-inositol isomerase IolI1;protein_id=WP_000976927.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 144012 145355 . - . ID=gene-SO06_RS11815;Name=srfJ;gbkey=Gene;gene=srfJ;gene_biotype=protein_coding;locus_tag=SO06_RS11815 NZ_MYDG01000007.1 Protein Homology CDS 144012 145355 . - 0 ID=cds-WP_023232261.1;Parent=gene-SO06_RS11815;Dbxref=GenBank:WP_023232261.1;Name=WP_023232261.1;gbkey=CDS;gene=srfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463287.1;locus_tag=SO06_RS11815;product=lysosomal glucosyl ceramidase-like type III secretion effector SrfJ;protein_id=WP_023232261.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 145452 146462 . - . ID=gene-SO06_RS11820;Name=iolG1;gbkey=Gene;gene=iolG1;gene_biotype=protein_coding;locus_tag=SO06_RS11820 NZ_MYDG01000007.1 Protein Homology CDS 145452 146462 . - 0 ID=cds-WP_000172704.1;Parent=gene-SO06_RS11820;Dbxref=GenBank:WP_000172704.1;Name=WP_000172704.1;gbkey=CDS;gene=iolG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463286.1;locus_tag=SO06_RS11820;product=inositol 2-dehydrogenase IolG1;protein_id=WP_000172704.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 146481 147401 . - . ID=gene-SO06_RS11825;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=SO06_RS11825 NZ_MYDG01000007.1 Protein Homology CDS 146481 147401 . - 0 ID=cds-WP_080204220.1;Parent=gene-SO06_RS11825;Dbxref=GenBank:WP_080204220.1;Name=WP_080204220.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463285.3;locus_tag=SO06_RS11825;product=myo-inosose-2 dehydratase;protein_id=WP_080204220.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 147661 148485 . - . ID=gene-SO06_RS11830;Name=reiD;gbkey=Gene;gene=reiD;gene_biotype=protein_coding;locus_tag=SO06_RS11830 NZ_MYDG01000007.1 Protein Homology CDS 147661 148485 . - 0 ID=cds-WP_000332219.1;Parent=gene-SO06_RS11830;Dbxref=GenBank:WP_000332219.1;Name=WP_000332219.1;gbkey=CDS;gene=reiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332219.1;locus_tag=SO06_RS11830;product=myo-inositol utilization transcriptional regulator ReiD;protein_id=WP_000332219.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 148608 148910 . + . ID=gene-SO06_RS11835;Name=SO06_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11835 NZ_MYDG01000007.1 Protein Homology CDS 148608 148910 . + 0 ID=cds-WP_071786851.1;Parent=gene-SO06_RS11835;Dbxref=GenBank:WP_071786851.1;Name=WP_071786851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453693.1;locus_tag=SO06_RS11835;product=hypothetical protein;protein_id=WP_071786851.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 148926 150431 . + . ID=gene-SO06_RS11840;Name=iolA;gbkey=Gene;gene=iolA;gene_biotype=protein_coding;locus_tag=SO06_RS11840 NZ_MYDG01000007.1 Protein Homology CDS 148926 150431 . + 0 ID=cds-WP_000450729.1;Parent=gene-SO06_RS11840;Dbxref=GenBank:WP_000450729.1;Name=WP_000450729.1;gbkey=CDS;gene=iolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463282.1;locus_tag=SO06_RS11840;product=malonate-semialdehyde dehydrogenase IolA;protein_id=WP_000450729.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 150456 151265 . + . ID=gene-SO06_RS11845;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=SO06_RS11845 NZ_MYDG01000007.1 Protein Homology CDS 150456 151265 . + 0 ID=cds-WP_000002010.1;Parent=gene-SO06_RS11845;Dbxref=GenBank:WP_000002010.1;Name=WP_000002010.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463281.1;locus_tag=SO06_RS11845;product=5-deoxy-glucuronate isomerase;protein_id=WP_000002010.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 151618 153054 . - . ID=gene-SO06_RS11850;Name=iolT2;gbkey=Gene;gene=iolT2;gene_biotype=protein_coding;locus_tag=SO06_RS11850 NZ_MYDG01000007.1 Protein Homology CDS 151618 153054 . - 0 ID=cds-WP_000083108.1;Parent=gene-SO06_RS11850;Dbxref=GenBank:WP_000083108.1;Name=WP_000083108.1;gbkey=CDS;gene=iolT2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463280.1;locus_tag=SO06_RS11850;product=myo-inositol import MFS transporter IolT2;protein_id=WP_000083108.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 153091 153285 . + . ID=gene-SO06_RS11855;Name=SO06_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11855 NZ_MYDG01000007.1 GeneMarkS-2+ CDS 153091 153285 . + 0 ID=cds-WP_017465835.1;Parent=gene-SO06_RS11855;Dbxref=GenBank:WP_017465835.1;Name=WP_017465835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS11855;product=hypothetical protein;protein_id=WP_017465835.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 153513 154946 . + . ID=gene-SO06_RS11860;Name=iolT1;gbkey=Gene;gene=iolT1;gene_biotype=protein_coding;locus_tag=SO06_RS11860 NZ_MYDG01000007.1 Protein Homology CDS 153513 154946 . + 0 ID=cds-WP_000107709.1;Parent=gene-SO06_RS11860;Dbxref=GenBank:WP_000107709.1;Name=WP_000107709.1;gbkey=CDS;gene=iolT1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463279.1;locus_tag=SO06_RS11860;product=myo-inositol import MFS transporter IolT1;protein_id=WP_000107709.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 154997 155830 . - . ID=gene-SO06_RS11865;Name=iolR;gbkey=Gene;gene=iolR;gene_biotype=protein_coding;locus_tag=SO06_RS11865 NZ_MYDG01000007.1 Protein Homology CDS 154997 155830 . - 0 ID=cds-WP_000033840.1;Parent=gene-SO06_RS11865;Dbxref=GenBank:WP_000033840.1;Name=WP_000033840.1;gbkey=CDS;gene=iolR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463278.1;locus_tag=SO06_RS11865;product=myo-inositol utilization transcriptional regulator IolR;protein_id=WP_000033840.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 156321 157700 . - . ID=gene-SO06_RS11875;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=SO06_RS11875 NZ_MYDG01000007.1 Protein Homology CDS 156321 157700 . - 0 ID=cds-WP_001219833.1;Parent=gene-SO06_RS11875;Dbxref=GenBank:WP_001219833.1;Name=WP_001219833.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463277.1;locus_tag=SO06_RS11875;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219833.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 157875 158873 . + . ID=gene-SO06_RS11880;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=SO06_RS11880 NZ_MYDG01000007.1 Protein Homology CDS 157875 158873 . + 0 ID=cds-WP_000853764.1;Parent=gene-SO06_RS11880;Dbxref=GenBank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=SO06_RS11880;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 159100 159630 . + . ID=gene-SO06_RS11885;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=SO06_RS11885 NZ_MYDG01000007.1 Protein Homology CDS 159100 159630 . + 0 ID=cds-WP_000055079.1;Parent=gene-SO06_RS11885;Dbxref=GenBank:WP_000055079.1;Name=WP_000055079.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=SO06_RS11885;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 160040 161203 . + . ID=gene-SO06_RS11890;Name=SO06_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11890 NZ_MYDG01000007.1 Protein Homology CDS 160040 161203 . + 0 ID=cds-WP_023138836.1;Parent=gene-SO06_RS11890;Dbxref=GenBank:WP_023138836.1;Name=WP_023138836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=SO06_RS11890;product=metallo-dependent hydrolase;protein_id=WP_023138836.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 161200 162408 . + . ID=gene-SO06_RS11895;Name=SO06_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11895 NZ_MYDG01000007.1 Protein Homology CDS 161200 162408 . + 0 ID=cds-WP_000203131.1;Parent=gene-SO06_RS11895;Dbxref=GenBank:WP_000203131.1;Name=WP_000203131.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=SO06_RS11895;product=MFS transporter;protein_id=WP_000203131.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 162463 162807 . - . ID=gene-SO06_RS11900;Name=SO06_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11900 NZ_MYDG01000007.1 Protein Homology CDS 162463 162807 . - 0 ID=cds-WP_001219167.1;Parent=gene-SO06_RS11900;Dbxref=GenBank:WP_001219167.1;Name=WP_001219167.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=SO06_RS11900;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219167.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 162810 166589 . - . ID=gene-SO06_RS11905;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=SO06_RS11905 NZ_MYDG01000007.1 Protein Homology CDS 162810 166589 . - 0 ID=cds-WP_080204221.1;Parent=gene-SO06_RS11905;Dbxref=GenBank:WP_080204221.1;Name=WP_080204221.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=SO06_RS11905;product=autotransporter assembly complex protein TamB;protein_id=WP_080204221.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 166586 168319 . - . ID=gene-SO06_RS11910;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=SO06_RS11910 NZ_MYDG01000007.1 Protein Homology CDS 166586 168319 . - 0 ID=cds-WP_001120235.1;Parent=gene-SO06_RS11910;Dbxref=GenBank:WP_001120235.1;Name=WP_001120235.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=SO06_RS11910;product=autotransporter assembly complex protein TamA;protein_id=WP_001120235.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 168532 169170 . + . ID=gene-SO06_RS11915;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=SO06_RS11915 NZ_MYDG01000007.1 Protein Homology CDS 168532 169170 . + 0 ID=cds-WP_000051471.1;Parent=gene-SO06_RS11915;Dbxref=GenBank:WP_000051471.1;Name=WP_000051471.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=SO06_RS11915;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_000051471.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 169353 170696 . + . ID=gene-SO06_RS11920;Name=SO06_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11920 NZ_MYDG01000007.1 Protein Homology CDS 169353 170696 . + 0 ID=cds-WP_000934974.1;Parent=gene-SO06_RS11920;Dbxref=GenBank:WP_000934974.1;Name=WP_000934974.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=SO06_RS11920;product=hemolysin family protein;protein_id=WP_000934974.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 170781 170987 . - . ID=gene-SO06_RS11925;Name=SO06_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11925 NZ_MYDG01000007.1 Protein Homology CDS 170781 170987 . - 0 ID=cds-WP_000689229.1;Parent=gene-SO06_RS11925;Dbxref=GenBank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=SO06_RS11925;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 171314 171871 . + . ID=gene-SO06_RS11935;Name=SO06_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11935 NZ_MYDG01000007.1 Protein Homology CDS 171314 171871 . + 0 ID=cds-WP_000175302.1;Parent=gene-SO06_RS11935;Dbxref=GenBank:WP_000175302.1;Name=WP_000175302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=SO06_RS11935;product=YtfJ family protein;protein_id=WP_000175302.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 171861 172601 . - . ID=gene-SO06_RS11940;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=SO06_RS11940 NZ_MYDG01000007.1 Protein Homology CDS 171861 172601 . - 0 ID=cds-WP_000893398.1;Parent=gene-SO06_RS11940;Dbxref=GenBank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=SO06_RS11940;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 172869 174812 . + . ID=gene-SO06_RS11950;Name=SO06_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11950 NZ_MYDG01000007.1 Protein Homology CDS 172869 174812 . + 0 ID=cds-WP_023232264.1;Parent=gene-SO06_RS11950;Dbxref=GenBank:WP_023232264.1;Name=WP_023232264.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=SO06_RS11950;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_023232264.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 174870 175256 . - . ID=gene-SO06_RS11955;Name=SO06_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11955 NZ_MYDG01000007.1 Protein Homology CDS 174870 175256 . - 0 ID=cds-WP_001201297.1;Parent=gene-SO06_RS11955;Dbxref=GenBank:WP_001201297.1;Name=WP_001201297.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=SO06_RS11955;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001201297.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 175344 176192 . + . ID=gene-SO06_RS11960;Name=SO06_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11960 NZ_MYDG01000007.1 Protein Homology CDS 175344 176192 . + 0 ID=cds-WP_023232265.1;Parent=gene-SO06_RS11960;Dbxref=GenBank:WP_023232265.1;Name=WP_023232265.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=SO06_RS11960;product=SDR family oxidoreductase;protein_id=WP_023232265.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 176273 177238 . + . ID=gene-SO06_RS11965;Name=SO06_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11965 NZ_MYDG01000007.1 Protein Homology CDS 176273 177238 . + 0 ID=cds-WP_000623290.1;Parent=gene-SO06_RS11965;Dbxref=GenBank:WP_000623290.1;Name=WP_000623290.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=SO06_RS11965;product=DMT family transporter;protein_id=WP_000623290.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 177341 178003 . + . ID=gene-SO06_RS11970;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=SO06_RS11970 NZ_MYDG01000007.1 Protein Homology CDS 177341 178003 . + 0 ID=cds-WP_000331471.1;Parent=gene-SO06_RS11970;Dbxref=GenBank:WP_000331471.1;Name=WP_000331471.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=SO06_RS11970;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331471.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 178115 179524 . - . ID=gene-SO06_RS11975;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=SO06_RS11975 NZ_MYDG01000007.1 Protein Homology CDS 178115 179524 . - 0 ID=cds-WP_000228322.1;Parent=gene-SO06_RS11975;Dbxref=GenBank:WP_000228322.1;Name=WP_000228322.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=SO06_RS11975;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228322.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 179820 180440 . - . ID=gene-SO06_RS11980;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=SO06_RS11980 NZ_MYDG01000007.1 Protein Homology CDS 179820 180440 . - 0 ID=cds-WP_000235161.1;Parent=gene-SO06_RS11980;Dbxref=GenBank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=SO06_RS11980;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000235161.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 180660 181295 . + . ID=gene-SO06_RS11985;Name=SO06_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11985 NZ_MYDG01000007.1 Protein Homology CDS 180660 181295 . + 0 ID=cds-WP_001119448.1;Parent=gene-SO06_RS11985;Dbxref=GenBank:WP_001119448.1;Name=WP_001119448.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=SO06_RS11985;product=OapA family protein;protein_id=WP_001119448.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 181345 182271 . - . ID=gene-SO06_RS11990;Name=SO06_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS11990 NZ_MYDG01000007.1 Protein Homology CDS 181345 182271 . - 0 ID=cds-WP_023232266.1;Parent=gene-SO06_RS11990;Dbxref=GenBank:WP_023232266.1;Name=WP_023232266.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=SO06_RS11990;product=DMT family transporter;protein_id=WP_023232266.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 182419 182868 . - . ID=gene-SO06_RS11995;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=SO06_RS11995 NZ_MYDG01000007.1 Protein Homology CDS 182419 182868 . - 0 ID=cds-WP_001196065.1;Parent=gene-SO06_RS11995;Dbxref=GenBank:WP_001196065.1;Name=WP_001196065.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=SO06_RS11995;product=50S ribosomal protein L9;protein_id=WP_001196065.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 182910 183137 . - . ID=gene-SO06_RS12000;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=SO06_RS12000 NZ_MYDG01000007.1 Protein Homology CDS 182910 183137 . - 0 ID=cds-WP_000135199.1;Parent=gene-SO06_RS12000;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=SO06_RS12000;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 183142 183456 . - . ID=gene-SO06_RS12005;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=SO06_RS12005 NZ_MYDG01000007.1 Protein Homology CDS 183142 183456 . - 0 ID=cds-WP_001519453.1;Parent=gene-SO06_RS12005;Dbxref=GenBank:WP_001519453.1;Name=WP_001519453.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=SO06_RS12005;product=primosomal replication protein N;protein_id=WP_001519453.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 183463 183858 . - . ID=gene-SO06_RS12010;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=SO06_RS12010 NZ_MYDG01000007.1 Protein Homology CDS 183463 183858 . - 0 ID=cds-WP_001216673.1;Parent=gene-SO06_RS12010;Dbxref=GenBank:WP_001216673.1;Name=WP_001216673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=SO06_RS12010;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 183929 184135 . - . ID=gene-SO06_RS12015;Name=SO06_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12015 NZ_MYDG01000007.1 Protein Homology CDS 183929 184135 . - 0 ID=cds-WP_001661855.1;Parent=gene-SO06_RS12015;Dbxref=GenBank:WP_001661855.1;Name=WP_001661855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463251.1;locus_tag=SO06_RS12015;product=hypothetical protein;protein_id=WP_001661855.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 184329 184604 . + . ID=gene-SO06_RS12025;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=SO06_RS12025 NZ_MYDG01000007.1 Protein Homology CDS 184329 184604 . + 0 ID=cds-WP_001529484.1;Parent=gene-SO06_RS12025;Dbxref=GenBank:WP_001529484.1;Name=WP_001529484.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463250.1;locus_tag=SO06_RS12025;product=DUF1471 family protein YjfY;protein_id=WP_001529484.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 184733 185419 . - . ID=gene-SO06_RS12030;Name=SO06_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12030 NZ_MYDG01000007.1 Protein Homology CDS 184733 185419 . - 0 ID=cds-WP_001170771.1;Parent=gene-SO06_RS12030;Dbxref=GenBank:WP_001170771.1;Name=WP_001170771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=SO06_RS12030;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_001170771.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 185419 186273 . - . ID=gene-SO06_RS12035;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=SO06_RS12035 NZ_MYDG01000007.1 Protein Homology CDS 185419 186273 . - 0 ID=cds-WP_000949530.1;Parent=gene-SO06_RS12035;Dbxref=GenBank:WP_000949530.1;Name=WP_000949530.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=SO06_RS12035;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949530.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 186283 186933 . - . ID=gene-SO06_RS12040;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=SO06_RS12040 NZ_MYDG01000007.1 Protein Homology CDS 186283 186933 . - 0 ID=cds-WP_000056761.1;Parent=gene-SO06_RS12040;Dbxref=GenBank:WP_000056761.1;Name=WP_000056761.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=SO06_RS12040;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056761.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 186947 187411 . - . ID=gene-SO06_RS12045;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=SO06_RS12045 NZ_MYDG01000007.1 Protein Homology CDS 186947 187411 . - 0 ID=cds-WP_000776531.1;Parent=gene-SO06_RS12045;Dbxref=GenBank:WP_000776531.1;Name=WP_000776531.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=SO06_RS12045;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776531.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 187421 187726 . - . ID=gene-SO06_RS12050;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=SO06_RS12050 NZ_MYDG01000007.1 Protein Homology CDS 187421 187726 . - 0 ID=cds-WP_000218358.1;Parent=gene-SO06_RS12050;Dbxref=GenBank:WP_000218358.1;Name=WP_000218358.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=SO06_RS12050;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218358.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 187742 189139 . - . ID=gene-SO06_RS12055;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=SO06_RS12055 NZ_MYDG01000007.1 Protein Homology CDS 187742 189139 . - 0 ID=cds-WP_000404873.1;Parent=gene-SO06_RS12055;Dbxref=GenBank:WP_000404873.1;Name=WP_000404873.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=SO06_RS12055;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404873.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 189502 190566 . + . ID=gene-SO06_RS12060;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=SO06_RS12060 NZ_MYDG01000007.1 Protein Homology CDS 189502 190566 . + 0 ID=cds-WP_000049161.1;Parent=gene-SO06_RS12060;Dbxref=GenBank:WP_000049161.1;Name=WP_000049161.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=SO06_RS12060;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049161.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 190671 191426 . + . ID=gene-SO06_RS12065;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=SO06_RS12065 NZ_MYDG01000007.1 Protein Homology CDS 190671 191426 . + 0 ID=cds-WP_000133618.1;Parent=gene-SO06_RS12065;Dbxref=GenBank:WP_000133618.1;Name=WP_000133618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=SO06_RS12065;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133618.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 191423 192172 . - . ID=gene-SO06_RS12070;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=SO06_RS12070 NZ_MYDG01000007.1 Protein Homology CDS 191423 192172 . - 0 ID=cds-WP_000560303.1;Parent=gene-SO06_RS12070;Dbxref=GenBank:WP_000560303.1;Name=WP_000560303.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=SO06_RS12070;product=esterase;protein_id=WP_000560303.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 192356 192685 . + . ID=gene-SO06_RS12075;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=SO06_RS12075 NZ_MYDG01000007.1 Protein Homology CDS 192356 192685 . + 0 ID=cds-WP_000586835.1;Parent=gene-SO06_RS12075;Dbxref=GenBank:WP_000586835.1;Name=WP_000586835.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=SO06_RS12075;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000586835.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 192816 193091 . + . ID=gene-SO06_RS12080;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=SO06_RS12080 NZ_MYDG01000007.1 Protein Homology CDS 192816 193091 . + 0 ID=cds-WP_001518964.1;Parent=gene-SO06_RS12080;Dbxref=GenBank:WP_001518964.1;Name=WP_001518964.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=SO06_RS12080;product=DUF1471 family protease activator YjfN;protein_id=WP_001518964.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 193169 194791 . - . ID=gene-SO06_RS12085;Name=SO06_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12085 NZ_MYDG01000007.1 Protein Homology CDS 193169 194791 . - 0 ID=cds-WP_000118965.1;Parent=gene-SO06_RS12085;Dbxref=GenBank:WP_000118965.1;Name=WP_000118965.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=SO06_RS12085;product=isovaleryl-CoA dehydrogenase;protein_id=WP_000118965.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 194876 196039 . - . ID=gene-SO06_RS12090;Name=SO06_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12090 NZ_MYDG01000007.1 Protein Homology CDS 194876 196039 . - 0 ID=cds-WP_000943934.1;Parent=gene-SO06_RS12090;Dbxref=GenBank:WP_000943934.1;Name=WP_000943934.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=SO06_RS12090;product=glutathionylspermidine synthase family protein;protein_id=WP_000943934.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 196042 196680 . - . ID=gene-SO06_RS12095;Name=SO06_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12095 NZ_MYDG01000007.1 Protein Homology CDS 196042 196680 . - 0 ID=cds-WP_001085606.1;Parent=gene-SO06_RS12095;Dbxref=GenBank:WP_001085606.1;Name=WP_001085606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=SO06_RS12095;product=DUF1190 domain-containing protein;protein_id=WP_001085606.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 196690 197088 . - . ID=gene-SO06_RS12100;Name=SO06_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12100 NZ_MYDG01000007.1 Protein Homology CDS 196690 197088 . - 0 ID=cds-WP_000547738.1;Parent=gene-SO06_RS12100;Dbxref=GenBank:WP_000547738.1;Name=WP_000547738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=SO06_RS12100;product=DUF350 domain-containing protein;protein_id=WP_000547738.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 197106 197789 . - . ID=gene-SO06_RS12105;Name=SO06_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12105 NZ_MYDG01000007.1 Protein Homology CDS 197106 197789 . - 0 ID=cds-WP_000090290.1;Parent=gene-SO06_RS12105;Dbxref=GenBank:WP_000090290.1;Name=WP_000090290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=SO06_RS12105;product=YjfK family protein;protein_id=WP_000090290.1;transl_table=11 NZ_MYDG01000007.1 RefSeq pseudogene 197912 198013 . - . ID=gene-SO06_RS25565;Name=SO06_RS25565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25565;partial=true;pseudo=true;start_range=.,197912 NZ_MYDG01000007.1 Protein Homology CDS 197912 198013 . - 0 ID=cds-SO06_RS25565;Parent=gene-SO06_RS25565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=SO06_RS25565;partial=true;product=hypothetical protein;pseudo=true;start_range=.,197912;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 198013 198711 . - . ID=gene-SO06_RS12110;Name=SO06_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12110 NZ_MYDG01000007.1 Protein Homology CDS 198013 198711 . - 0 ID=cds-WP_000511974.1;Parent=gene-SO06_RS12110;Dbxref=GenBank:WP_000511974.1;Name=WP_000511974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=SO06_RS12110;product=PspA/IM30 family protein;protein_id=WP_000511974.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 198726 199130 . - . ID=gene-SO06_RS12115;Name=SO06_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12115 NZ_MYDG01000007.1 Protein Homology CDS 198726 199130 . - 0 ID=cds-WP_023232268.1;Parent=gene-SO06_RS12115;Dbxref=GenBank:WP_023232268.1;Name=WP_023232268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=SO06_RS12115;product=YjfI family protein;protein_id=WP_023232268.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 199263 199994 . - . ID=gene-SO06_RS12120;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=SO06_RS12120 NZ_MYDG01000007.1 Protein Homology CDS 199263 199994 . - 0 ID=cds-WP_001293277.1;Parent=gene-SO06_RS12120;Dbxref=GenBank:WP_001293277.1;Name=WP_001293277.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=SO06_RS12120;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293277.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 200085 202523 . - . ID=gene-SO06_RS12125;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=SO06_RS12125 NZ_MYDG01000007.1 Protein Homology CDS 200085 202523 . - 0 ID=cds-WP_000076357.1;Parent=gene-SO06_RS12125;Dbxref=GenBank:WP_000076357.1;Name=WP_000076357.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=SO06_RS12125;product=ribonuclease R;protein_id=WP_000076357.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 202561 202986 . - . ID=gene-SO06_RS12130;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=SO06_RS12130 NZ_MYDG01000007.1 Protein Homology CDS 202561 202986 . - 0 ID=cds-WP_001177632.1;Parent=gene-SO06_RS12130;Dbxref=GenBank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=SO06_RS12130;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 203206 204504 . - . ID=gene-SO06_RS12140;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=SO06_RS12140 NZ_MYDG01000007.1 Protein Homology CDS 203206 204504 . - 0 ID=cds-WP_023232269.1;Parent=gene-SO06_RS12140;Dbxref=GenBank:WP_023232269.1;Name=WP_023232269.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=SO06_RS12140;product=adenylosuccinate synthase;protein_id=WP_023232269.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 204607 204804 . - . ID=gene-SO06_RS12145;Name=SO06_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12145 NZ_MYDG01000007.1 Protein Homology CDS 204607 204804 . - 0 ID=cds-WP_001089290.1;Parent=gene-SO06_RS12145;Dbxref=GenBank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=SO06_RS12145;product=DUF2065 domain-containing protein;protein_id=WP_001089290.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 204883 205887 . - . ID=gene-SO06_RS12150;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=SO06_RS12150 NZ_MYDG01000007.1 Protein Homology CDS 204883 205887 . - 0 ID=cds-WP_001232417.1;Parent=gene-SO06_RS12150;Dbxref=GenBank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=SO06_RS12150;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 205890 207149 . - . ID=gene-SO06_RS12155;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=SO06_RS12155 NZ_MYDG01000007.1 Protein Homology CDS 205890 207149 . - 0 ID=cds-WP_000312505.1;Parent=gene-SO06_RS12155;Dbxref=GenBank:WP_000312505.1;Name=WP_000312505.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=SO06_RS12155;product=FtsH protease activity modulator HflK;protein_id=WP_000312505.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 207364 208644 . - . ID=gene-SO06_RS12160;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=SO06_RS12160 NZ_MYDG01000007.1 Protein Homology CDS 207364 208644 . - 0 ID=cds-WP_000460338.1;Parent=gene-SO06_RS12160;Dbxref=GenBank:WP_000460338.1;Name=WP_000460338.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=SO06_RS12160;product=ribosome rescue GTPase HflX;protein_id=WP_000460338.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 208716 209024 . - . ID=gene-SO06_RS12165;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=SO06_RS12165 NZ_MYDG01000007.1 Protein Homology CDS 208716 209024 . - 0 ID=cds-WP_001051875.1;Parent=gene-SO06_RS12165;Dbxref=GenBank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=SO06_RS12165;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 209107 210057 . - . ID=gene-SO06_RS12170;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=SO06_RS12170 NZ_MYDG01000007.1 Protein Homology CDS 209107 210057 . - 0 ID=cds-WP_001000737.1;Parent=gene-SO06_RS12170;Dbxref=GenBank:WP_001000737.1;Name=WP_001000737.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=SO06_RS12170;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000737.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 210050 211906 . - . ID=gene-SO06_RS12175;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=SO06_RS12175 NZ_MYDG01000007.1 Protein Homology CDS 210050 211906 . - 0 ID=cds-WP_023231647.1;Parent=gene-SO06_RS12175;Dbxref=GenBank:WP_023231647.1;Name=WP_023231647.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=SO06_RS12175;product=DNA mismatch repair endonuclease MutL;protein_id=WP_023231647.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 211916 213235 . - . ID=gene-SO06_RS12180;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=SO06_RS12180 NZ_MYDG01000007.1 Protein Homology CDS 211916 213235 . - 0 ID=cds-WP_000640373.1;Parent=gene-SO06_RS12180;Dbxref=GenBank:WP_000640373.1;Name=WP_000640373.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=SO06_RS12180;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000640373.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 213252 213713 . - . ID=gene-SO06_RS12185;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=SO06_RS12185 NZ_MYDG01000007.1 Protein Homology CDS 213252 213713 . - 0 ID=cds-WP_023231648.1;Parent=gene-SO06_RS12185;Dbxref=GenBank:WP_023231648.1;Name=WP_023231648.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=SO06_RS12185;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_023231648.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 213685 215232 . - . ID=gene-SO06_RS12190;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=SO06_RS12190 NZ_MYDG01000007.1 Protein Homology CDS 213685 215232 . - 0 ID=cds-WP_000968675.1;Parent=gene-SO06_RS12190;Dbxref=GenBank:WP_000968675.1;Name=WP_000968675.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=SO06_RS12190;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_000968675.1;transl_table=11 NZ_MYDG01000007.1 RefSeq gene 215231 216370 . + . ID=gene-SO06_RS12195;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=SO06_RS12195 NZ_MYDG01000007.1 Protein Homology CDS 215231 216370 . + 0 ID=cds-WP_001670426.1;Parent=gene-SO06_RS12195;Dbxref=GenBank:WP_001670426.1;Name=WP_001670426.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=SO06_RS12195;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001670426.1;transl_table=11 ##sequence-region NZ_MYDG01000008.1 1 213682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000008.1 RefSeq region 1 213682 . + . ID=NZ_MYDG01000008.1:1..213682;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000008.1 RefSeq gene 1 980 . - . ID=gene-SO06_RS12200;Name=SO06_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12200;partial=true;start_range=.,1 NZ_MYDG01000008.1 Protein Homology CDS 1 980 . - 0 ID=cds-WP_139783742.1;Parent=gene-SO06_RS12200;Dbxref=GenBank:WP_139783742.1;Name=WP_139783742.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=SO06_RS12200;partial=true;product=pyruvate carboxylase subunit B;protein_id=WP_139783742.1;start_range=.,1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 996 1235 . - . ID=gene-SO06_RS12205;Name=SO06_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12205 NZ_MYDG01000008.1 Protein Homology CDS 996 1235 . - 0 ID=cds-WP_001001155.1;Parent=gene-SO06_RS12205;Dbxref=GenBank:WP_001001155.1;Name=WP_001001155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010836018.1;locus_tag=SO06_RS12205;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001001155.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 1394 2734 . - . ID=gene-SO06_RS12210;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=SO06_RS12210 NZ_MYDG01000008.1 Protein Homology CDS 1394 2734 . - 0 ID=cds-WP_000183602.1;Parent=gene-SO06_RS12210;Dbxref=GenBank:WP_000183602.1;Name=WP_000183602.1;Ontology_term=GO:0006101,GO:0006814,GO:0008514,GO:0015293;gbkey=CDS;gene=citS;go_function=organic anion transmembrane transporter activity|0008514||IEA,symporter activity|0015293||IEA;go_process=citrate metabolic process|0006101||IEA,sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=SO06_RS12210;product=citrate/sodium symporter CitS;protein_id=WP_000183602.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 2979 4022 . + . ID=gene-SO06_RS12215;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=SO06_RS12215 NZ_MYDG01000008.1 Protein Homology CDS 2979 4022 . + 0 ID=cds-WP_072103663.1;Parent=gene-SO06_RS12215;Dbxref=GenBank:WP_072103663.1;Name=WP_072103663.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=SO06_RS12215;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_072103663.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 4052 4345 . + . ID=gene-SO06_RS12220;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=SO06_RS12220 NZ_MYDG01000008.1 Protein Homology CDS 4052 4345 . + 0 ID=cds-WP_000691461.1;Parent=gene-SO06_RS12220;Dbxref=GenBank:WP_000691461.1;Name=WP_000691461.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=SO06_RS12220;product=citrate lyase acyl carrier protein;protein_id=WP_000691461.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 4342 5211 . + . ID=gene-SO06_RS12225;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=SO06_RS12225 NZ_MYDG01000008.1 Protein Homology CDS 4342 5211 . + 0 ID=cds-WP_001247813.1;Parent=gene-SO06_RS12225;Dbxref=GenBank:WP_001247813.1;Name=WP_001247813.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=SO06_RS12225;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001247813.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 5222 6742 . + . ID=gene-SO06_RS12230;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=SO06_RS12230 NZ_MYDG01000008.1 Protein Homology CDS 5222 6742 . + 0 ID=cds-WP_000665573.1;Parent=gene-SO06_RS12230;Dbxref=GenBank:WP_000665573.1;Name=WP_000665573.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=SO06_RS12230;product=citrate lyase subunit alpha;protein_id=WP_000665573.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 6742 7293 . + . ID=gene-SO06_RS12235;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=SO06_RS12235 NZ_MYDG01000008.1 Protein Homology CDS 6742 7293 . + 0 ID=cds-WP_023232516.1;Parent=gene-SO06_RS12235;Dbxref=GenBank:WP_023232516.1;Name=WP_023232516.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=SO06_RS12235;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_023232516.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 7271 8179 . + . ID=gene-SO06_RS12240;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=SO06_RS12240 NZ_MYDG01000008.1 Protein Homology CDS 7271 8179 . + 0 ID=cds-WP_001103238.1;Parent=gene-SO06_RS12240;Dbxref=GenBank:WP_001103238.1;Name=WP_001103238.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=SO06_RS12240;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_001103238.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 8359 9180 . + . ID=gene-SO06_RS12245;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=SO06_RS12245 NZ_MYDG01000008.1 Protein Homology CDS 8359 9180 . + 0 ID=cds-WP_000544036.1;Parent=gene-SO06_RS12245;Dbxref=GenBank:WP_000544036.1;Name=WP_000544036.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=SO06_RS12245;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000544036.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 10044 11192 . + . ID=gene-SO06_RS12260;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=SO06_RS12260 NZ_MYDG01000008.1 Protein Homology CDS 10044 11192 . + 0 ID=cds-WP_080204224.1;Parent=gene-SO06_RS12260;Dbxref=GenBank:WP_080204224.1;Name=WP_080204224.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=SO06_RS12260;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_080204224.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 11211 14438 . + . ID=gene-SO06_RS12265;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=SO06_RS12265 NZ_MYDG01000008.1 Protein Homology CDS 11211 14438 . + 0 ID=cds-WP_001126311.1;Parent=gene-SO06_RS12265;Dbxref=GenBank:WP_001126311.1;Name=WP_001126311.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=SO06_RS12265;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126311.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 14712 15107 . + . ID=gene-SO06_RS12270;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=SO06_RS12270 NZ_MYDG01000008.1 Protein Homology CDS 14712 15107 . + 0 ID=cds-WP_000333324.1;Parent=gene-SO06_RS12270;Dbxref=GenBank:WP_000333324.1;Name=WP_000333324.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=SO06_RS12270;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333324.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 15185 15781 . - . ID=gene-SO06_RS12275;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=SO06_RS12275 NZ_MYDG01000008.1 Protein Homology CDS 15185 15781 . - 0 ID=cds-WP_000122863.1;Parent=gene-SO06_RS12275;Dbxref=GenBank:WP_000122863.1;Name=WP_000122863.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=SO06_RS12275;product=carnitine operon protein CaiE;protein_id=WP_000122863.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 15891 16676 . - . ID=gene-SO06_RS12280;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=SO06_RS12280 NZ_MYDG01000008.1 Protein Homology CDS 15891 16676 . - 0 ID=cds-WP_000004383.1;Parent=gene-SO06_RS12280;Dbxref=GenBank:WP_000004383.1;Name=WP_000004383.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=SO06_RS12280;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004383.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 16730 18283 . - . ID=gene-SO06_RS12285;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=SO06_RS12285 NZ_MYDG01000008.1 Protein Homology CDS 16730 18283 . - 0 ID=cds-WP_080204225.1;Parent=gene-SO06_RS12285;Dbxref=GenBank:WP_080204225.1;Name=WP_080204225.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=SO06_RS12285;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_080204225.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 18346 19563 . - . ID=gene-SO06_RS12290;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=SO06_RS12290 NZ_MYDG01000008.1 Protein Homology CDS 18346 19563 . - 0 ID=cds-WP_001016209.1;Parent=gene-SO06_RS12290;Dbxref=GenBank:WP_001016209.1;Name=WP_001016209.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=SO06_RS12290;product=L-carnitine CoA-transferase;protein_id=WP_001016209.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 19675 20817 . - . ID=gene-SO06_RS12295;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=SO06_RS12295 NZ_MYDG01000008.1 Protein Homology CDS 19675 20817 . - 0 ID=cds-WP_000347134.1;Parent=gene-SO06_RS12295;Dbxref=GenBank:WP_000347134.1;Name=WP_000347134.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=SO06_RS12295;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347134.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 20852 22369 . - . ID=gene-SO06_RS12300;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=SO06_RS12300 NZ_MYDG01000008.1 Protein Homology CDS 20852 22369 . - 0 ID=cds-WP_000787073.1;Parent=gene-SO06_RS12300;Dbxref=GenBank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=SO06_RS12300;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 22850 23620 . + . ID=gene-SO06_RS12310;Name=SO06_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12310 NZ_MYDG01000008.1 Protein Homology CDS 22850 23620 . + 0 ID=cds-WP_080204226.1;Parent=gene-SO06_RS12310;Dbxref=GenBank:WP_080204226.1;Name=WP_080204226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=SO06_RS12310;product=electron transfer flavoprotein FixA;protein_id=WP_080204226.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 23636 24577 . + . ID=gene-SO06_RS12315;Name=SO06_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12315 NZ_MYDG01000008.1 Protein Homology CDS 23636 24577 . + 0 ID=cds-WP_080204227.1;Parent=gene-SO06_RS12315;Dbxref=GenBank:WP_080204227.1;Name=WP_080204227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=SO06_RS12315;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_080204227.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 24627 25913 . + . ID=gene-SO06_RS12320;Name=SO06_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12320 NZ_MYDG01000008.1 Protein Homology CDS 24627 25913 . + 0 ID=cds-WP_001287774.1;Parent=gene-SO06_RS12320;Dbxref=GenBank:WP_001287774.1;Name=WP_001287774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=SO06_RS12320;product=FAD-dependent oxidoreductase;protein_id=WP_001287774.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 25910 26197 . + . ID=gene-SO06_RS12325;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=SO06_RS12325 NZ_MYDG01000008.1 Protein Homology CDS 25910 26197 . + 0 ID=cds-WP_000203736.1;Parent=gene-SO06_RS12325;Dbxref=GenBank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=SO06_RS12325;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 26344 27684 . + . ID=gene-SO06_RS12330;Name=SO06_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12330 NZ_MYDG01000008.1 Protein Homology CDS 26344 27684 . + 0 ID=cds-WP_001187057.1;Parent=gene-SO06_RS12330;Dbxref=GenBank:WP_001187057.1;Name=WP_001187057.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=SO06_RS12330;product=MFS transporter;protein_id=WP_001187057.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 27773 28003 . + . ID=gene-SO06_RS12335;Name=SO06_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12335 NZ_MYDG01000008.1 Protein Homology CDS 27773 28003 . + 0 ID=cds-WP_001172089.1;Parent=gene-SO06_RS12335;Dbxref=GenBank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=SO06_RS12335;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 28303 28719 . + . ID=gene-SO06_RS12340;Name=SO06_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12340 NZ_MYDG01000008.1 Protein Homology CDS 28303 28719 . + 0 ID=cds-WP_161460226.1;Parent=gene-SO06_RS12340;Dbxref=GenBank:WP_161460226.1;Name=WP_161460226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=SO06_RS12340;product=hypothetical protein;protein_id=WP_161460226.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 28943 29233 . - . ID=gene-SO06_RS12345;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=SO06_RS12345 NZ_MYDG01000008.1 Protein Homology CDS 28943 29233 . - 0 ID=cds-WP_000710534.1;Parent=gene-SO06_RS12345;Dbxref=GenBank:WP_000710534.1;Name=WP_000710534.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=SO06_RS12345;product=DUF1471 family virulence protein SrfN;protein_id=WP_000710534.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 30131 32020 . + . ID=gene-SO06_RS12360;Name=SO06_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12360 NZ_MYDG01000008.1 Protein Homology CDS 30131 32020 . + 0 ID=cds-WP_001658528.1;Parent=gene-SO06_RS12360;Dbxref=GenBank:WP_001658528.1;Name=WP_001658528.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=SO06_RS12360;product=sulfatase-like hydrolase/transferase;protein_id=WP_001658528.1;transl_table=11 NZ_MYDG01000008.1 RefSeq pseudogene 32372 32437 . - . ID=gene-SO06_RS25785;Name=SO06_RS25785;end_range=32437,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25785;partial=true;pseudo=true NZ_MYDG01000008.1 Protein Homology CDS 32372 32437 . - 0 ID=cds-SO06_RS25785;Parent=gene-SO06_RS25785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=32437,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=SO06_RS25785;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 32573 33103 . + . ID=gene-SO06_RS12375;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=SO06_RS12375 NZ_MYDG01000008.1 Protein Homology CDS 32573 33103 . + 0 ID=cds-WP_023232476.1;Parent=gene-SO06_RS12375;Dbxref=GenBank:WP_023232476.1;Name=WP_023232476.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=SO06_RS12375;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_023232476.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 33096 34958 . + . ID=gene-SO06_RS12380;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=SO06_RS12380 NZ_MYDG01000008.1 Protein Homology CDS 33096 34958 . + 0 ID=cds-WP_000377163.1;Parent=gene-SO06_RS12380;Dbxref=GenBank:WP_000377163.1;Name=WP_000377163.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=SO06_RS12380;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377163.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 35157 35636 . + . ID=gene-SO06_RS12385;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=SO06_RS12385 NZ_MYDG01000008.1 Protein Homology CDS 35157 35636 . + 0 ID=cds-WP_000624379.1;Parent=gene-SO06_RS12385;Dbxref=GenBank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=SO06_RS12385;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 35742 36590 . - . ID=gene-SO06_RS12390;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=SO06_RS12390 NZ_MYDG01000008.1 Protein Homology CDS 35742 36590 . - 0 ID=cds-WP_000257211.1;Parent=gene-SO06_RS12390;Dbxref=GenBank:WP_000257211.1;Name=WP_000257211.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=SO06_RS12390;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257211.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 36601 36978 . - . ID=gene-SO06_RS12395;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=SO06_RS12395 NZ_MYDG01000008.1 Protein Homology CDS 36601 36978 . - 0 ID=cds-WP_000610894.1;Parent=gene-SO06_RS12395;Dbxref=GenBank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=SO06_RS12395;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610894.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 36981 37802 . - . ID=gene-SO06_RS12400;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=SO06_RS12400 NZ_MYDG01000008.1 Protein Homology CDS 36981 37802 . - 0 ID=cds-WP_001065397.1;Parent=gene-SO06_RS12400;Dbxref=GenBank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=SO06_RS12400;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 37799 38788 . - . ID=gene-SO06_RS12405;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=SO06_RS12405 NZ_MYDG01000008.1 Protein Homology CDS 37799 38788 . - 0 ID=cds-WP_023232477.1;Parent=gene-SO06_RS12405;Dbxref=GenBank:WP_023232477.1;Name=WP_023232477.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=SO06_RS12405;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_023232477.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 38788 40074 . - . ID=gene-SO06_RS12410;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=SO06_RS12410 NZ_MYDG01000008.1 Protein Homology CDS 38788 40074 . - 0 ID=cds-WP_080204228.1;Parent=gene-SO06_RS12410;Dbxref=GenBank:WP_080204228.1;Name=WP_080204228.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=SO06_RS12410;product=peptidylprolyl isomerase SurA;protein_id=WP_080204228.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 40128 42488 . - . ID=gene-SO06_RS12415;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=SO06_RS12415 NZ_MYDG01000008.1 Protein Homology CDS 40128 42488 . - 0 ID=cds-WP_000746127.1;Parent=gene-SO06_RS12415;Dbxref=GenBank:WP_000746127.1;Name=WP_000746127.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=SO06_RS12415;product=LPS assembly protein LptD;protein_id=WP_000746127.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 42742 43554 . + . ID=gene-SO06_RS12420;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=SO06_RS12420 NZ_MYDG01000008.1 Protein Homology CDS 42742 43554 . + 0 ID=cds-WP_001200595.1;Parent=gene-SO06_RS12420;Dbxref=GenBank:WP_001200595.1;Name=WP_001200595.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=SO06_RS12420;product=co-chaperone DjlA;protein_id=WP_001200595.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 43649 44308 . - . ID=gene-SO06_RS12425;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=SO06_RS12425 NZ_MYDG01000008.1 Protein Homology CDS 43649 44308 . - 0 ID=cds-WP_000525196.1;Parent=gene-SO06_RS12425;Dbxref=GenBank:WP_000525196.1;Name=WP_000525196.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=SO06_RS12425;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525196.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 44320 47226 . - . ID=gene-SO06_RS12430;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=SO06_RS12430 NZ_MYDG01000008.1 Protein Homology CDS 44320 47226 . - 0 ID=cds-WP_001116968.1;Parent=gene-SO06_RS12430;Dbxref=GenBank:WP_001116968.1;Name=WP_001116968.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=SO06_RS12430;product=RNA polymerase-associated protein RapA;protein_id=WP_001116968.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 47400 49751 . - . ID=gene-SO06_RS12435;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=SO06_RS12435 NZ_MYDG01000008.1 Protein Homology CDS 47400 49751 . - 0 ID=cds-WP_000035715.1;Parent=gene-SO06_RS12435;Dbxref=GenBank:WP_000035715.1;Name=WP_000035715.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=SO06_RS12435;product=DNA polymerase II;protein_id=WP_000035715.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 49795 50415 . - . ID=gene-SO06_RS12440;Name=SO06_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12440 NZ_MYDG01000008.1 Protein Homology CDS 49795 50415 . - 0 ID=cds-WP_000877512.1;Parent=gene-SO06_RS12440;Dbxref=GenBank:WP_000877512.1;Name=WP_000877512.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=SO06_RS12440;product=YdcF family protein;protein_id=WP_000877512.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 50933 51352 . + . ID=gene-SO06_RS12450;Name=SO06_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12450 NZ_MYDG01000008.1 Protein Homology CDS 50933 51352 . + 0 ID=cds-WP_024148439.1;Parent=gene-SO06_RS12450;Dbxref=GenBank:WP_024148439.1;Name=WP_024148439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=SO06_RS12450;product=DUF4751 family protein;protein_id=WP_024148439.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 51358 52053 . - . ID=gene-SO06_RS12455;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=SO06_RS12455 NZ_MYDG01000008.1 Protein Homology CDS 51358 52053 . - 0 ID=cds-WP_000888684.1;Parent=gene-SO06_RS12455;Dbxref=GenBank:WP_000888684.1;Name=WP_000888684.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=SO06_RS12455;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888684.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 52194 53696 . - . ID=gene-SO06_RS12460;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=SO06_RS12460 NZ_MYDG01000008.1 Protein Homology CDS 52194 53696 . - 0 ID=cds-WP_023231569.1;Parent=gene-SO06_RS12460;Dbxref=GenBank:WP_023231569.1;Name=WP_023231569.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=SO06_RS12460;product=L-arabinose isomerase;protein_id=WP_023231569.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 53707 55416 . - . ID=gene-SO06_RS12465;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=SO06_RS12465 NZ_MYDG01000008.1 Protein Homology CDS 53707 55416 . - 0 ID=cds-WP_048348999.1;Parent=gene-SO06_RS12465;Dbxref=GenBank:WP_048348999.1;Name=WP_048348999.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=SO06_RS12465;product=ribulokinase;protein_id=WP_048348999.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 55757 56602 . + . ID=gene-SO06_RS12470;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=SO06_RS12470 NZ_MYDG01000008.1 Protein Homology CDS 55757 56602 . + 0 ID=cds-WP_000852387.1;Parent=gene-SO06_RS12470;Dbxref=GenBank:WP_000852387.1;Name=WP_000852387.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=SO06_RS12470;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852387.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 56721 57488 . + . ID=gene-SO06_RS12475;Name=SO06_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12475 NZ_MYDG01000008.1 Protein Homology CDS 56721 57488 . + 0 ID=cds-WP_001148369.1;Parent=gene-SO06_RS12475;Dbxref=GenBank:WP_001148369.1;Name=WP_001148369.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=SO06_RS12475;product=DedA family protein;protein_id=WP_001148369.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 57527 58234 . - . ID=gene-SO06_RS12480;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=SO06_RS12480 NZ_MYDG01000008.1 Protein Homology CDS 57527 58234 . - 0 ID=cds-WP_000915965.1;Parent=gene-SO06_RS12480;Dbxref=GenBank:WP_000915965.1;Name=WP_000915965.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=SO06_RS12480;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000915965.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 58218 59828 . - . ID=gene-SO06_RS12485;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=SO06_RS12485 NZ_MYDG01000008.1 Protein Homology CDS 58218 59828 . - 0 ID=cds-WP_080204229.1;Parent=gene-SO06_RS12485;Dbxref=GenBank:WP_080204229.1;Name=WP_080204229.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=SO06_RS12485;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_080204229.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 59804 60787 . - . ID=gene-SO06_RS12490;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=SO06_RS12490 NZ_MYDG01000008.1 Protein Homology CDS 59804 60787 . - 0 ID=cds-WP_000915326.1;Parent=gene-SO06_RS12490;Dbxref=GenBank:WP_000915326.1;Name=WP_000915326.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=SO06_RS12490;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_000915326.1;transl_table=11 NZ_MYDG01000008.1 cmsearch riboswitch 60819 60918 . - . ID=id-NZ_MYDG01000008.1:60819..60918;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_MYDG01000008.1 RefSeq gene 60965 62623 . - . ID=gene-SO06_RS12495;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=SO06_RS12495 NZ_MYDG01000008.1 Protein Homology CDS 60965 62623 . - 0 ID=cds-WP_080204230.1;Parent=gene-SO06_RS12495;Dbxref=GenBank:WP_080204230.1;Name=WP_080204230.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=SO06_RS12495;product=HTH-type transcriptional regulator SgrR;protein_id=WP_080204230.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 62716 62838 . + . ID=gene-SO06_RS12500;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=SO06_RS12500 NZ_MYDG01000008.1 Protein Homology CDS 62716 62838 . + 0 ID=cds-WP_080204231.1;Parent=gene-SO06_RS12500;Dbxref=GenBank:WP_080204231.1;Name=WP_080204231.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=SO06_RS12500;product=glucose uptake inhibitor SgrT;protein_id=WP_080204231.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 63173 63778 . - . ID=gene-SO06_RS12505;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=SO06_RS12505 NZ_MYDG01000008.1 Protein Homology CDS 63173 63778 . - 0 ID=cds-WP_000818267.1;Parent=gene-SO06_RS12505;Dbxref=GenBank:WP_000818267.1;Name=WP_000818267.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=SO06_RS12505;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818267.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 63789 65189 . - . ID=gene-SO06_RS12510;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=SO06_RS12510 NZ_MYDG01000008.1 Protein Homology CDS 63789 65189 . - 0 ID=cds-WP_001140632.1;Parent=gene-SO06_RS12510;Dbxref=GenBank:WP_001140632.1;Name=WP_001140632.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=SO06_RS12510;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140632.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 65192 66283 . - . ID=gene-SO06_RS12515;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=SO06_RS12515 NZ_MYDG01000008.1 Protein Homology CDS 65192 66283 . - 0 ID=cds-WP_000042336.1;Parent=gene-SO06_RS12515;Dbxref=GenBank:WP_000042336.1;Name=WP_000042336.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=SO06_RS12515;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042336.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 66283 67854 . - . ID=gene-SO06_RS12520;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=SO06_RS12520 NZ_MYDG01000008.1 Protein Homology CDS 66283 67854 . - 0 ID=cds-WP_000082819.1;Parent=gene-SO06_RS12520;Dbxref=GenBank:WP_000082819.1;Name=WP_000082819.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=SO06_RS12520;product=2-isopropylmalate synthase;protein_id=WP_000082819.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 67942 68028 . - . ID=gene-SO06_RS12525;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=SO06_RS12525 NZ_MYDG01000008.1 Protein Homology CDS 67942 68028 . - 0 ID=cds-WP_001575587.1;Parent=gene-SO06_RS12525;Dbxref=GenBank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=SO06_RS12525;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 68685 69629 . + . ID=gene-SO06_RS12530;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=SO06_RS12530 NZ_MYDG01000008.1 Protein Homology CDS 68685 69629 . + 0 ID=cds-WP_001115420.1;Parent=gene-SO06_RS12530;Dbxref=GenBank:WP_001115420.1;Name=WP_001115420.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=SO06_RS12530;product=transcriptional regulator LeuO;protein_id=WP_001115420.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 69951 71675 . + . ID=gene-SO06_RS12535;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=SO06_RS12535 NZ_MYDG01000008.1 Protein Homology CDS 69951 71675 . + 0 ID=cds-WP_001748923.1;Parent=gene-SO06_RS12535;Dbxref=GenBank:WP_001748923.1;Name=WP_001748923.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=SO06_RS12535;product=acetolactate synthase 3 large subunit;protein_id=WP_001748923.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 71678 72169 . + . ID=gene-SO06_RS12540;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=SO06_RS12540 NZ_MYDG01000008.1 Protein Homology CDS 71678 72169 . + 0 ID=cds-WP_001563086.1;Parent=gene-SO06_RS12540;Dbxref=GenBank:WP_001563086.1;Name=WP_001563086.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=SO06_RS12540;product=acetolactate synthase small subunit;protein_id=WP_001563086.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 72453 73457 . + . ID=gene-SO06_RS12545;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=SO06_RS12545 NZ_MYDG01000008.1 Protein Homology CDS 72453 73457 . + 0 ID=cds-WP_000762406.1;Parent=gene-SO06_RS12545;Dbxref=GenBank:WP_000762406.1;Name=WP_000762406.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=SO06_RS12545;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 74063 74521 . + . ID=gene-SO06_RS12550;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=SO06_RS12550 NZ_MYDG01000008.1 Protein Homology CDS 74063 74521 . + 0 ID=cds-WP_000488294.1;Parent=gene-SO06_RS12550;Dbxref=GenBank:WP_000488294.1;Name=WP_000488294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=SO06_RS12550;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_000488294.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 74523 75464 . + . ID=gene-SO06_RS12555;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=SO06_RS12555 NZ_MYDG01000008.1 Protein Homology CDS 74523 75464 . + 0 ID=cds-WP_000970433.1;Parent=gene-SO06_RS12555;Dbxref=GenBank:WP_000970433.1;Name=WP_000970433.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=SO06_RS12555;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970433.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 75461 75826 . + . ID=gene-SO06_RS12560;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=SO06_RS12560 NZ_MYDG01000008.1 Protein Homology CDS 75461 75826 . + 0 ID=cds-WP_000625651.1;Parent=gene-SO06_RS12560;Dbxref=GenBank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=SO06_RS12560;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 75842 77608 . + . ID=gene-SO06_RS12565;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=SO06_RS12565 NZ_MYDG01000008.1 Protein Homology CDS 75842 77608 . + 0 ID=cds-WP_000642235.1;Parent=gene-SO06_RS12565;Dbxref=GenBank:WP_000642235.1;Name=WP_000642235.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=SO06_RS12565;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642235.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 77595 79082 . + . ID=gene-SO06_RS12570;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=SO06_RS12570 NZ_MYDG01000008.1 Protein Homology CDS 77595 79082 . + 0 ID=cds-WP_023231565.1;Parent=gene-SO06_RS12570;Dbxref=GenBank:WP_023231565.1;Name=WP_023231565.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=SO06_RS12570;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_023231565.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 79079 80437 . + . ID=gene-SO06_RS12575;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=SO06_RS12575 NZ_MYDG01000008.1 Protein Homology CDS 79079 80437 . + 0 ID=cds-WP_000626634.1;Parent=gene-SO06_RS12575;Dbxref=GenBank:WP_000626634.1;Name=WP_000626634.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=SO06_RS12575;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626634.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 80431 81513 . + . ID=gene-SO06_RS12580;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=SO06_RS12580 NZ_MYDG01000008.1 Protein Homology CDS 80431 81513 . + 0 ID=cds-WP_000964138.1;Parent=gene-SO06_RS12580;Dbxref=GenBank:WP_000964138.1;Name=WP_000964138.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=SO06_RS12580;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964138.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 81516 82832 . + . ID=gene-SO06_RS12585;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=SO06_RS12585 NZ_MYDG01000008.1 Protein Homology CDS 81516 82832 . + 0 ID=cds-WP_023231564.1;Parent=gene-SO06_RS12585;Dbxref=GenBank:WP_023231564.1;Name=WP_023231564.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=SO06_RS12585;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_023231564.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 82832 84076 . + . ID=gene-SO06_RS12590;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=SO06_RS12590 NZ_MYDG01000008.1 Protein Homology CDS 82832 84076 . + 0 ID=cds-WP_001239803.1;Parent=gene-SO06_RS12590;Dbxref=GenBank:WP_001239803.1;Name=WP_001239803.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=SO06_RS12590;product=cell division protein FtsW;protein_id=WP_001239803.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 84073 85140 . + . ID=gene-SO06_RS12595;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=SO06_RS12595 NZ_MYDG01000008.1 Protein Homology CDS 84073 85140 . + 0 ID=cds-WP_000016613.1;Parent=gene-SO06_RS12595;Dbxref=GenBank:WP_000016613.1;Name=WP_000016613.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=SO06_RS12595;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016613.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 85259 86734 . + . ID=gene-SO06_RS12600;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=SO06_RS12600 NZ_MYDG01000008.1 Protein Homology CDS 85259 86734 . + 0 ID=cds-WP_001096072.1;Parent=gene-SO06_RS12600;Dbxref=GenBank:WP_001096072.1;Name=WP_001096072.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=SO06_RS12600;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096072.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 86727 87647 . + . ID=gene-SO06_RS12605;Name=SO06_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12605 NZ_MYDG01000008.1 Protein Homology CDS 86727 87647 . + 0 ID=cds-WP_000763895.1;Parent=gene-SO06_RS12605;Dbxref=GenBank:WP_000763895.1;Name=WP_000763895.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=SO06_RS12605;product=D-alanine--D-alanine ligase;protein_id=WP_000763895.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 87649 88479 . + . ID=gene-SO06_RS12610;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=SO06_RS12610 NZ_MYDG01000008.1 Protein Homology CDS 87649 88479 . + 0 ID=cds-WP_000075728.1;Parent=gene-SO06_RS12610;Dbxref=GenBank:WP_000075728.1;Name=WP_000075728.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=SO06_RS12610;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 88476 89738 . + . ID=gene-SO06_RS12615;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=SO06_RS12615 NZ_MYDG01000008.1 Protein Homology CDS 88476 89738 . + 0 ID=cds-WP_000588463.1;Parent=gene-SO06_RS12615;Dbxref=GenBank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=SO06_RS12615;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 89799 90950 . + . ID=gene-SO06_RS12620;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=SO06_RS12620 NZ_MYDG01000008.1 Protein Homology CDS 89799 90950 . + 0 ID=cds-WP_000462785.1;Parent=gene-SO06_RS12620;Dbxref=GenBank:WP_000462785.1;Name=WP_000462785.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=SO06_RS12620;product=cell division protein FtsZ;protein_id=WP_000462785.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 91051 91968 . + . ID=gene-SO06_RS12625;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=SO06_RS12625 NZ_MYDG01000008.1 Protein Homology CDS 91051 91968 . + 0 ID=cds-WP_000595487.1;Parent=gene-SO06_RS12625;Dbxref=GenBank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=SO06_RS12625;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 92247 92744 . + . ID=gene-SO06_RS12630;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=SO06_RS12630 NZ_MYDG01000008.1 Protein Homology CDS 92247 92744 . + 0 ID=cds-WP_000014336.1;Parent=gene-SO06_RS12630;Dbxref=GenBank:WP_000014336.1;Name=WP_000014336.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=SO06_RS12630;product=secA translation cis-regulator SecM;protein_id=WP_000014336.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 92806 95511 . + . ID=gene-SO06_RS12635;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=SO06_RS12635 NZ_MYDG01000008.1 Protein Homology CDS 92806 95511 . + 0 ID=cds-WP_000905757.1;Parent=gene-SO06_RS12635;Dbxref=GenBank:WP_000905757.1;Name=WP_000905757.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=SO06_RS12635;product=preprotein translocase subunit SecA;protein_id=WP_000905757.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 95663 96058 . + . ID=gene-SO06_RS12640;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=SO06_RS12640 NZ_MYDG01000008.1 Protein Homology CDS 95663 96058 . + 0 ID=cds-WP_000736058.1;Parent=gene-SO06_RS12640;Dbxref=GenBank:WP_000736058.1;Name=WP_000736058.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736055.1;locus_tag=SO06_RS12640;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736058.1;transl_table=11 NZ_MYDG01000008.1 RefSeq pseudogene 96092 96232 . - . ID=gene-SO06_RS25570;Name=SO06_RS25570;end_range=96232,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25570;partial=true;pseudo=true NZ_MYDG01000008.1 Protein Homology CDS 96092 96232 . - 0 ID=cds-SO06_RS25570;Parent=gene-SO06_RS25570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=96232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=SO06_RS25570;partial=true;product=aldo/keto reductase;pseudo=true;transl_table=11 NZ_MYDG01000008.1 RefSeq pseudogene 96268 96375 . + . ID=gene-SO06_RS25040;Name=SO06_RS25040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25040;partial=true;pseudo=true;start_range=.,96268 NZ_MYDG01000008.1 Protein Homology CDS 96268 96375 . + 0 ID=cds-SO06_RS25040;Parent=gene-SO06_RS25040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=SO06_RS25040;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,96268;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 96372 96563 . - . ID=gene-SO06_RS12655;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=SO06_RS12655 NZ_MYDG01000008.1 Protein Homology CDS 96372 96563 . - 0 ID=cds-WP_001286419.1;Parent=gene-SO06_RS12655;Dbxref=GenBank:WP_001286419.1;Name=WP_001286419.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=SO06_RS12655;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 96573 97316 . - . ID=gene-SO06_RS12660;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=SO06_RS12660 NZ_MYDG01000008.1 Protein Homology CDS 96573 97316 . - 0 ID=cds-WP_000557441.1;Parent=gene-SO06_RS12660;Dbxref=GenBank:WP_000557441.1;Name=WP_000557441.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=SO06_RS12660;product=cell division protein ZapD;protein_id=WP_000557441.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 97316 97936 . - . ID=gene-SO06_RS12665;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=SO06_RS12665 NZ_MYDG01000008.1 Protein Homology CDS 97316 97936 . - 0 ID=cds-WP_001270913.1;Parent=gene-SO06_RS12665;Dbxref=GenBank:WP_001270913.1;Name=WP_001270913.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=SO06_RS12665;product=dephospho-CoA kinase;protein_id=WP_001270913.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 98162 99205 . + . ID=gene-SO06_RS12670;Name=SO06_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12670 NZ_MYDG01000008.1 Protein Homology CDS 98162 99205 . + 0 ID=cds-WP_001217365.1;Parent=gene-SO06_RS12670;Dbxref=GenBank:WP_001217365.1;Name=WP_001217365.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=SO06_RS12670;product=GMP reductase;protein_id=WP_001217365.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 99236 100438 . - . ID=gene-SO06_RS12675;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=SO06_RS12675 NZ_MYDG01000008.1 Protein Homology CDS 99236 100438 . - 0 ID=cds-WP_023232453.1;Parent=gene-SO06_RS12675;Dbxref=GenBank:WP_023232453.1;Name=WP_023232453.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=SO06_RS12675;product=protein transport protein HofC;protein_id=WP_023232453.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 100428 101813 . - . ID=gene-SO06_RS12680;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=SO06_RS12680 NZ_MYDG01000008.1 Protein Homology CDS 100428 101813 . - 0 ID=cds-WP_023232454.1;Parent=gene-SO06_RS12680;Dbxref=GenBank:WP_023232454.1;Name=WP_023232454.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=SO06_RS12680;product=type II secretion system protein GspE;protein_id=WP_023232454.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 101823 102260 . - . ID=gene-SO06_RS12685;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=SO06_RS12685 NZ_MYDG01000008.1 Protein Homology CDS 101823 102260 . - 0 ID=cds-WP_000414989.1;Parent=gene-SO06_RS12685;Dbxref=GenBank:WP_000414989.1;Name=WP_000414989.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=SO06_RS12685;product=prepilin peptidase-dependent pilin;protein_id=WP_000414989.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 102482 103375 . - . ID=gene-SO06_RS12695;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=SO06_RS12695 NZ_MYDG01000008.1 Protein Homology CDS 102482 103375 . - 0 ID=cds-WP_001135136.1;Parent=gene-SO06_RS12695;Dbxref=GenBank:WP_001135136.1;Name=WP_001135136.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308140.1;locus_tag=SO06_RS12695;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135136.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 103463 104026 . + . ID=gene-SO06_RS12700;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=SO06_RS12700 NZ_MYDG01000008.1 Protein Homology CDS 103463 104026 . + 0 ID=cds-WP_000936326.1;Parent=gene-SO06_RS12700;Dbxref=GenBank:WP_000936326.1;Name=WP_000936326.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=SO06_RS12700;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936326.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 104023 104877 . + . ID=gene-SO06_RS12705;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=SO06_RS12705 NZ_MYDG01000008.1 Protein Homology CDS 104023 104877 . + 0 ID=cds-WP_000172039.1;Parent=gene-SO06_RS12705;Dbxref=GenBank:WP_000172039.1;Name=WP_000172039.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=SO06_RS12705;product=beta-lactamase regulator AmpE;protein_id=WP_000172039.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 104969 105919 . - . ID=gene-SO06_RS12710;Name=SO06_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12710 NZ_MYDG01000008.1 Protein Homology CDS 104969 105919 . - 0 ID=cds-WP_000024771.1;Parent=gene-SO06_RS12710;Dbxref=GenBank:WP_000024771.1;Name=WP_000024771.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=SO06_RS12710;product=glycoside hydrolase family 43 protein;protein_id=WP_000024771.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 105919 107325 . - . ID=gene-SO06_RS12715;Name=SO06_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12715 NZ_MYDG01000008.1 Protein Homology CDS 105919 107325 . - 0 ID=cds-WP_000357539.1;Parent=gene-SO06_RS12715;Dbxref=GenBank:WP_000357539.1;Name=WP_000357539.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=SO06_RS12715;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_000357539.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 107489 108862 . - . ID=gene-SO06_RS12720;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=SO06_RS12720 NZ_MYDG01000008.1 Protein Homology CDS 107489 108862 . - 0 ID=cds-WP_000969487.1;Parent=gene-SO06_RS12720;Dbxref=GenBank:WP_000969487.1;Name=WP_000969487.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=SO06_RS12720;product=aromatic amino acid transporter AroP;protein_id=WP_000969487.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 109425 110189 . + . ID=gene-SO06_RS12725;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=SO06_RS12725 NZ_MYDG01000008.1 Protein Homology CDS 109425 110189 . + 0 ID=cds-WP_000331771.1;Parent=gene-SO06_RS12725;Dbxref=GenBank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=SO06_RS12725;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 110496 113159 . + . ID=gene-SO06_RS12735;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=SO06_RS12735 NZ_MYDG01000008.1 Protein Homology CDS 110496 113159 . + 0 ID=cds-WP_023232455.1;Parent=gene-SO06_RS12735;Dbxref=GenBank:WP_023232455.1;Name=WP_023232455.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=SO06_RS12735;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_023232455.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 113174 115063 . + . ID=gene-SO06_RS12740;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=SO06_RS12740 NZ_MYDG01000008.1 Protein Homology CDS 113174 115063 . + 0 ID=cds-WP_000963594.1;Parent=gene-SO06_RS12740;Dbxref=GenBank:WP_000963594.1;Name=WP_000963594.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=SO06_RS12740;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_000963594.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 115264 116688 . + . ID=gene-SO06_RS12745;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=SO06_RS12745 NZ_MYDG01000008.1 Protein Homology CDS 115264 116688 . + 0 ID=cds-WP_001519338.1;Parent=gene-SO06_RS12745;Dbxref=GenBank:WP_001519338.1;Name=WP_001519338.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=SO06_RS12745;product=dihydrolipoyl dehydrogenase;protein_id=WP_001519338.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 116977 117261 . + . ID=gene-SO06_RS12750;Name=SO06_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12750 NZ_MYDG01000008.1 Protein Homology CDS 116977 117261 . + 0 ID=cds-WP_000765363.1;Parent=gene-SO06_RS12750;Dbxref=GenBank:WP_000765363.1;Name=WP_000765363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=SO06_RS12750;product=outer membrane protein;protein_id=WP_000765363.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 117299 118090 . - . ID=gene-SO06_RS12755;Name=SO06_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12755 NZ_MYDG01000008.1 Protein Homology CDS 117299 118090 . - 0 ID=cds-WP_000757452.1;Parent=gene-SO06_RS12755;Dbxref=GenBank:WP_000757452.1;Name=WP_000757452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=SO06_RS12755;product=DUF2950 family protein;protein_id=WP_000757452.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 118103 119725 . - . ID=gene-SO06_RS12760;Name=SO06_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12760 NZ_MYDG01000008.1 Protein Homology CDS 118103 119725 . - 0 ID=cds-WP_023232456.1;Parent=gene-SO06_RS12760;Dbxref=GenBank:WP_023232456.1;Name=WP_023232456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=SO06_RS12760;product=DUF3300 domain-containing protein;protein_id=WP_023232456.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 120114 122711 . + . ID=gene-SO06_RS12765;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=SO06_RS12765 NZ_MYDG01000008.1 Protein Homology CDS 120114 122711 . + 0 ID=cds-WP_023138991.1;Parent=gene-SO06_RS12765;Dbxref=GenBank:WP_023138991.1;Name=WP_023138991.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=SO06_RS12765;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_023138991.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 122743 123714 . - . ID=gene-SO06_RS12770;Name=SO06_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12770 NZ_MYDG01000008.1 Protein Homology CDS 122743 123714 . - 0 ID=cds-WP_020839585.1;Parent=gene-SO06_RS12770;Dbxref=GenBank:WP_020839585.1;Name=WP_020839585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000220794.1;locus_tag=SO06_RS12770;product=DUF4424 family protein;protein_id=WP_020839585.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 123853 124875 . + . ID=gene-SO06_RS12775;Name=SO06_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12775 NZ_MYDG01000008.1 Protein Homology CDS 123853 124875 . + 0 ID=cds-WP_223156447.1;Parent=gene-SO06_RS12775;Dbxref=GenBank:WP_223156447.1;Name=WP_223156447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001271160.1;locus_tag=SO06_RS12775;product=DUF4431 domain-containing protein;protein_id=WP_223156447.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 124901 125218 . + . ID=gene-SO06_RS12780;Name=SO06_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12780 NZ_MYDG01000008.1 Protein Homology CDS 124901 125218 . + 0 ID=cds-WP_023200587.1;Parent=gene-SO06_RS12780;Dbxref=GenBank:WP_023200587.1;Name=WP_023200587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000925733.1;locus_tag=SO06_RS12780;product=hypothetical protein;protein_id=WP_023200587.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 125233 126165 . - . ID=gene-SO06_RS12785;Name=SO06_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12785 NZ_MYDG01000008.1 Protein Homology CDS 125233 126165 . - 0 ID=cds-WP_023232459.1;Parent=gene-SO06_RS12785;Dbxref=GenBank:WP_023232459.1;Name=WP_023232459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716797.1;locus_tag=SO06_RS12785;product=DUF4424 family protein;protein_id=WP_023232459.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 126240 127379 . + . ID=gene-SO06_RS12790;Name=SO06_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12790 NZ_MYDG01000008.1 Protein Homology CDS 126240 127379 . + 0 ID=cds-WP_023232460.1;Parent=gene-SO06_RS12790;Dbxref=GenBank:WP_023232460.1;Name=WP_023232460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441546.1;locus_tag=SO06_RS12790;product=DUF4431 domain-containing protein;protein_id=WP_023232460.1;transl_table=11 NZ_MYDG01000008.1 RefSeq pseudogene 127468 127560 . + . ID=gene-SO06_RS25790;Name=SO06_RS25790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25790;partial=true;pseudo=true;start_range=.,127468 NZ_MYDG01000008.1 Protein Homology CDS 127468 127560 . + 0 ID=cds-SO06_RS25790;Parent=gene-SO06_RS25790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459163.1;locus_tag=SO06_RS25790;partial=true;product=hypothetical protein;pseudo=true;start_range=.,127468;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 127600 128064 . - . ID=gene-SO06_RS12800;Name=SO06_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12800 NZ_MYDG01000008.1 Protein Homology CDS 127600 128064 . - 0 ID=cds-WP_000110437.1;Parent=gene-SO06_RS12800;Dbxref=GenBank:WP_000110437.1;Name=WP_000110437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=SO06_RS12800;product=membrane protein;protein_id=WP_000110437.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 128474 128797 . - . ID=gene-SO06_RS12805;Name=SO06_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12805 NZ_MYDG01000008.1 Protein Homology CDS 128474 128797 . - 0 ID=cds-WP_001101536.1;Parent=gene-SO06_RS12805;Dbxref=GenBank:WP_001101536.1;Name=WP_001101536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=SO06_RS12805;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=WP_001101536.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 129068 129430 . + . ID=gene-SO06_RS12810;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=SO06_RS12810 NZ_MYDG01000008.1 Protein Homology CDS 129068 129430 . + 0 ID=cds-WP_000384308.1;Parent=gene-SO06_RS12810;Dbxref=GenBank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=SO06_RS12810;product=protein YacL;protein_id=WP_000384308.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 129665 130618 . + . ID=gene-SO06_RS12815;Name=SO06_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12815 NZ_MYDG01000008.1 Protein Homology CDS 129665 130618 . + 0 ID=cds-WP_001022089.1;Parent=gene-SO06_RS12815;Dbxref=GenBank:WP_001022089.1;Name=WP_001022089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=SO06_RS12815;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022089.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 130615 131886 . + . ID=gene-SO06_RS12820;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=SO06_RS12820 NZ_MYDG01000008.1 Protein Homology CDS 130615 131886 . + 0 ID=cds-WP_000783302.1;Parent=gene-SO06_RS12820;Dbxref=GenBank:WP_000783302.1;Name=WP_000783302.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=SO06_RS12820;product=D-threonate kinase;protein_id=WP_000783302.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 131876 132859 . + . ID=gene-SO06_RS12825;Name=SO06_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12825 NZ_MYDG01000008.1 Protein Homology CDS 131876 132859 . + 0 ID=cds-WP_000448745.1;Parent=gene-SO06_RS12825;Dbxref=GenBank:WP_000448745.1;Name=WP_000448745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=SO06_RS12825;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_000448745.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 132869 133636 . + . ID=gene-SO06_RS12830;Name=SO06_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12830 NZ_MYDG01000008.1 Protein Homology CDS 132869 133636 . + 0 ID=cds-WP_000678254.1;Parent=gene-SO06_RS12830;Dbxref=GenBank:WP_000678254.1;Name=WP_000678254.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=SO06_RS12830;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000678254.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 133666 134460 . - . ID=gene-SO06_RS12835;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=SO06_RS12835 NZ_MYDG01000008.1 Protein Homology CDS 133666 134460 . - 0 ID=cds-WP_000734293.1;Parent=gene-SO06_RS12835;Dbxref=GenBank:WP_000734293.1;Name=WP_000734293.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=SO06_RS12835;product=adenosylmethionine decarboxylase;protein_id=WP_000734293.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 134481 135341 . - . ID=gene-SO06_RS12840;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=SO06_RS12840 NZ_MYDG01000008.1 Protein Homology CDS 134481 135341 . - 0 ID=cds-WP_000829968.1;Parent=gene-SO06_RS12840;Dbxref=GenBank:WP_000829968.1;Name=WP_000829968.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=SO06_RS12840;product=polyamine aminopropyltransferase;protein_id=WP_000829968.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 135448 135795 . - . ID=gene-SO06_RS12845;Name=SO06_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12845 NZ_MYDG01000008.1 Protein Homology CDS 135448 135795 . - 0 ID=cds-WP_000846613.1;Parent=gene-SO06_RS12845;Dbxref=GenBank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=SO06_RS12845;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 135997 137607 . + . ID=gene-SO06_RS12850;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=SO06_RS12850 NZ_MYDG01000008.1 Protein Homology CDS 135997 137607 . + 0 ID=cds-WP_000946047.1;Parent=gene-SO06_RS12850;Dbxref=GenBank:WP_000946047.1;Name=WP_000946047.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=SO06_RS12850;product=multicopper oxidase CueO;protein_id=WP_000946047.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 137685 140075 . - . ID=gene-SO06_RS12855;Name=SO06_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12855 NZ_MYDG01000008.1 Protein Homology CDS 137685 140075 . - 0 ID=cds-WP_080204232.1;Parent=gene-SO06_RS12855;Dbxref=GenBank:WP_080204232.1;Name=WP_080204232.1;Ontology_term=GO:0016614,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=SO06_RS12855;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_080204232.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 140281 140817 . + . ID=gene-SO06_RS12860;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=SO06_RS12860 NZ_MYDG01000008.1 Protein Homology CDS 140281 140817 . + 0 ID=cds-WP_000683342.1;Parent=gene-SO06_RS12860;Dbxref=GenBank:WP_000683342.1;Name=WP_000683342.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=SO06_RS12860;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683342.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 140875 141537 . - . ID=gene-SO06_RS12865;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=SO06_RS12865 NZ_MYDG01000008.1 Protein Homology CDS 140875 141537 . - 0 ID=cds-WP_000651591.1;Parent=gene-SO06_RS12865;Dbxref=GenBank:WP_000651591.1;Name=WP_000651591.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=SO06_RS12865;product=carbonate dehydratase;protein_id=WP_000651591.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 141646 142572 . + . ID=gene-SO06_RS12870;Name=SO06_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12870 NZ_MYDG01000008.1 Protein Homology CDS 141646 142572 . + 0 ID=cds-WP_000150628.1;Parent=gene-SO06_RS12870;Dbxref=GenBank:WP_000150628.1;Name=WP_000150628.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=SO06_RS12870;product=ABC transporter ATP-binding protein;protein_id=WP_000150628.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 142569 143339 . + . ID=gene-SO06_RS12875;Name=SO06_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12875 NZ_MYDG01000008.1 Protein Homology CDS 142569 143339 . + 0 ID=cds-WP_000983418.1;Parent=gene-SO06_RS12875;Dbxref=GenBank:WP_000983418.1;Name=WP_000983418.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=SO06_RS12875;product=ABC transporter permease;protein_id=WP_000983418.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 143450 144526 . - . ID=gene-SO06_RS12880;Name=SO06_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12880 NZ_MYDG01000008.1 Protein Homology CDS 143450 144526 . - 0 ID=cds-WP_061375680.1;Parent=gene-SO06_RS12880;Dbxref=GenBank:WP_061375680.1;Name=WP_061375680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=SO06_RS12880;product=fimbrial protein;protein_id=WP_061375680.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 144535 147081 . - . ID=gene-SO06_RS12885;Name=SO06_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12885 NZ_MYDG01000008.1 Protein Homology CDS 144535 147081 . - 0 ID=cds-WP_080204242.1;Parent=gene-SO06_RS12885;Dbxref=GenBank:WP_080204242.1;Name=WP_080204242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=SO06_RS12885;product=fimbrial outer membrane usher protein;protein_id=WP_080204242.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 147108 147791 . - . ID=gene-SO06_RS12890;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=SO06_RS12890 NZ_MYDG01000008.1 Protein Homology CDS 147108 147791 . - 0 ID=cds-WP_001086408.1;Parent=gene-SO06_RS12890;Dbxref=GenBank:WP_001086408.1;Name=WP_001086408.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=SO06_RS12890;product=fimbrial biogenesis chaperone StiB;protein_id=WP_001086408.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 147839 148378 . - . ID=gene-SO06_RS12895;Name=stiA;gbkey=Gene;gene=stiA;gene_biotype=protein_coding;locus_tag=SO06_RS12895 NZ_MYDG01000008.1 Protein Homology CDS 147839 148378 . - 0 ID=cds-WP_001821456.1;Parent=gene-SO06_RS12895;Dbxref=GenBank:WP_001821456.1;Name=WP_001821456.1;gbkey=CDS;gene=stiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=SO06_RS12895;product=Sti fimbria major subunit StiA;protein_id=WP_001821456.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 148748 149188 . + . ID=gene-SO06_RS12900;Name=SO06_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12900 NZ_MYDG01000008.1 Protein Homology CDS 148748 149188 . + 0 ID=cds-WP_000901958.1;Parent=gene-SO06_RS12900;Dbxref=GenBank:WP_000901958.1;Name=WP_000901958.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=SO06_RS12900;product=PTS sugar transporter subunit IIA;protein_id=WP_000901958.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 149250 150479 . + . ID=gene-SO06_RS12905;Name=SO06_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS12905 NZ_MYDG01000008.1 Protein Homology CDS 149250 150479 . + 0 ID=cds-WP_080204233.1;Parent=gene-SO06_RS12905;Dbxref=GenBank:WP_080204233.1;Name=WP_080204233.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=SO06_RS12905;product=polysaccharide deacetylase family protein;protein_id=WP_080204233.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 150486 150866 . - . ID=gene-SO06_RS12910;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=SO06_RS12910 NZ_MYDG01000008.1 Protein Homology CDS 150486 150866 . - 0 ID=cds-WP_023178331.1;Parent=gene-SO06_RS12910;Dbxref=GenBank:WP_023178331.1;Name=WP_023178331.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=SO06_RS12910;product=aspartate 1-decarboxylase;protein_id=WP_023178331.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 150961 151815 . - . ID=gene-SO06_RS12920;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=SO06_RS12920 NZ_MYDG01000008.1 Protein Homology CDS 150961 151815 . - 0 ID=cds-WP_058116193.1;Parent=gene-SO06_RS12920;Dbxref=GenBank:WP_058116193.1;Name=WP_058116193.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=SO06_RS12920;product=pantoate--beta-alanine ligase;protein_id=WP_058116193.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 151940 152731 . - . ID=gene-SO06_RS12925;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=SO06_RS12925 NZ_MYDG01000008.1 Protein Homology CDS 151940 152731 . - 0 ID=cds-WP_023993177.1;Parent=gene-SO06_RS12925;Dbxref=GenBank:WP_023993177.1;Name=WP_023993177.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=SO06_RS12925;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_023993177.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 152852 153331 . - . ID=gene-SO06_RS12930;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=SO06_RS12930 NZ_MYDG01000008.1 Protein Homology CDS 152852 153331 . - 0 ID=cds-WP_000150777.1;Parent=gene-SO06_RS12930;Dbxref=GenBank:WP_000150777.1;Name=WP_000150777.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=SO06_RS12930;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000150777.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 153328 154725 . - . ID=gene-SO06_RS12935;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=SO06_RS12935 NZ_MYDG01000008.1 Protein Homology CDS 153328 154725 . - 0 ID=cds-WP_204355897.1;Parent=gene-SO06_RS12935;Dbxref=GenBank:WP_204355897.1;Name=WP_204355897.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=SO06_RS12935;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_204355897.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 154887 155783 . - . ID=gene-SO06_RS12940;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=SO06_RS12940 NZ_MYDG01000008.1 Protein Homology CDS 154887 155783 . - 0 ID=cds-WP_080204243.1;Parent=gene-SO06_RS12940;Dbxref=GenBank:WP_080204243.1;Name=WP_080204243.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=SO06_RS12940;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_080204243.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 155852 156307 . - . ID=gene-SO06_RS12945;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=SO06_RS12945 NZ_MYDG01000008.1 Protein Homology CDS 155852 156307 . - 0 ID=cds-WP_001155232.1;Parent=gene-SO06_RS12945;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=SO06_RS12945;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 156484 157188 . - . ID=gene-SO06_RS12950;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=SO06_RS12950 NZ_MYDG01000008.1 Protein Homology CDS 156484 157188 . - 0 ID=cds-WP_080204234.1;Parent=gene-SO06_RS12950;Dbxref=GenBank:WP_080204234.1;Name=WP_080204234.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=SO06_RS12950;product=DNA/RNA nuclease SfsA;protein_id=WP_080204234.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 157205 157735 . - . ID=gene-SO06_RS12955;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=SO06_RS12955 NZ_MYDG01000008.1 Protein Homology CDS 157205 157735 . - 0 ID=cds-WP_001294175.1;Parent=gene-SO06_RS12955;Dbxref=GenBank:WP_001294175.1;Name=WP_001294175.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=SO06_RS12955;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294175.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 157808 160237 . + . ID=gene-SO06_RS12960;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=SO06_RS12960 NZ_MYDG01000008.1 Protein Homology CDS 157808 160237 . + 0 ID=cds-WP_176208151.1;Parent=gene-SO06_RS12960;Dbxref=GenBank:WP_176208151.1;Name=WP_176208151.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=SO06_RS12960;product=ATP-dependent helicase HrpB;protein_id=WP_176208151.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 160377 162899 . + . ID=gene-SO06_RS12965;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=SO06_RS12965 NZ_MYDG01000008.1 Protein Homology CDS 160377 162899 . + 0 ID=cds-WP_000918127.1;Parent=gene-SO06_RS12965;Dbxref=GenBank:WP_000918127.1;Name=WP_000918127.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=SO06_RS12965;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918127.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 163192 165435 . + . ID=gene-SO06_RS12970;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=SO06_RS12970 NZ_MYDG01000008.1 Protein Homology CDS 163192 165435 . + 0 ID=cds-WP_000113212.1;Parent=gene-SO06_RS12970;Dbxref=GenBank:WP_000113212.1;Name=WP_000113212.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308181.1;locus_tag=SO06_RS12970;product=ferrichrome porin FhuA;protein_id=WP_000113212.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 165483 166280 . + . ID=gene-SO06_RS12975;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=SO06_RS12975 NZ_MYDG01000008.1 Protein Homology CDS 165483 166280 . + 0 ID=cds-WP_080204236.1;Parent=gene-SO06_RS12975;Dbxref=GenBank:WP_080204236.1;Name=WP_080204236.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=SO06_RS12975;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_080204236.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 166280 167170 . + . ID=gene-SO06_RS12980;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=SO06_RS12980 NZ_MYDG01000008.1 Protein Homology CDS 166280 167170 . + 0 ID=cds-WP_080204237.1;Parent=gene-SO06_RS12980;Dbxref=GenBank:WP_080204237.1;Name=WP_080204237.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=SO06_RS12980;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_080204237.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 167185 169224 . + . ID=gene-SO06_RS12985;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=SO06_RS12985 NZ_MYDG01000008.1 Protein Homology CDS 167185 169224 . + 0 ID=cds-WP_118998803.1;Parent=gene-SO06_RS12985;Dbxref=GenBank:WP_118998803.1;Name=WP_118998803.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=SO06_RS12985;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_118998803.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 170166 170726 . + . ID=gene-SO06_RS12995;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=SO06_RS12995 NZ_MYDG01000008.1 Protein Homology CDS 170166 170726 . + 0 ID=cds-WP_001090554.1;Parent=gene-SO06_RS12995;Dbxref=GenBank:WP_001090554.1;Name=WP_001090554.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=SO06_RS12995;product=fimbrial major subunit StfA;protein_id=WP_001090554.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 170812 173469 . + . ID=gene-SO06_RS13000;Name=SO06_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13000 NZ_MYDG01000008.1 Protein Homology CDS 170812 173469 . + 0 ID=cds-WP_080204240.1;Parent=gene-SO06_RS13000;Dbxref=GenBank:WP_080204240.1;Name=WP_080204240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=SO06_RS13000;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_080204240.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 173487 174239 . + . ID=gene-SO06_RS13005;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=SO06_RS13005 NZ_MYDG01000008.1 Protein Homology CDS 173487 174239 . + 0 ID=cds-WP_080204241.1;Parent=gene-SO06_RS13005;Dbxref=GenBank:WP_080204241.1;Name=WP_080204241.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=SO06_RS13005;product=fimbrial chaperone StfD;protein_id=WP_080204241.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 174258 174770 . + . ID=gene-SO06_RS13010;Name=SO06_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13010 NZ_MYDG01000008.1 Protein Homology CDS 174258 174770 . + 0 ID=cds-WP_001647824.1;Parent=gene-SO06_RS13010;Dbxref=GenBank:WP_001647824.1;Name=WP_001647824.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=SO06_RS13010;product=fimbrial protein;protein_id=WP_001647824.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 174767 175243 . + . ID=gene-SO06_RS13015;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=SO06_RS13015 NZ_MYDG01000008.1 Protein Homology CDS 174767 175243 . + 0 ID=cds-WP_063809428.1;Parent=gene-SO06_RS13015;Dbxref=GenBank:WP_063809428.1;Name=WP_063809428.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725047.1;locus_tag=SO06_RS13015;product=fimbrial minor subunit StfF;protein_id=WP_063809428.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 175243 175773 . + . ID=gene-SO06_RS13020;Name=SO06_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13020 NZ_MYDG01000008.1 Protein Homology CDS 175243 175773 . + 0 ID=cds-WP_080163689.1;Parent=gene-SO06_RS13020;Dbxref=GenBank:WP_080163689.1;Name=WP_080163689.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=SO06_RS13020;product=fimbrial protein;protein_id=WP_080163689.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 175773 176612 . + . ID=gene-SO06_RS13025;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=protein_coding;locus_tag=SO06_RS13025 NZ_MYDG01000008.1 Protein Homology CDS 175773 176612 . + 0 ID=cds-WP_047606996.1;Parent=gene-SO06_RS13025;Dbxref=GenBank:WP_047606996.1;Name=WP_047606996.1;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=SO06_RS13025;product=fimbrial adhesin StfH;protein_id=WP_047606996.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 176720 178000 . - . ID=gene-SO06_RS13030;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=SO06_RS13030 NZ_MYDG01000008.1 Protein Homology CDS 176720 178000 . - 0 ID=cds-WP_000045261.1;Parent=gene-SO06_RS13030;Dbxref=GenBank:WP_000045261.1;Name=WP_000045261.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=SO06_RS13030;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045261.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 178170 179591 . + . ID=gene-SO06_RS13035;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=SO06_RS13035 NZ_MYDG01000008.1 Protein Homology CDS 178170 179591 . + 0 ID=cds-WP_023222032.1;Parent=gene-SO06_RS13035;Dbxref=GenBank:WP_023222032.1;Name=WP_023222032.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=SO06_RS13035;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_023222032.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 179673 180017 . + . ID=gene-SO06_RS13040;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=SO06_RS13040 NZ_MYDG01000008.1 Protein Homology CDS 179673 180017 . + 0 ID=cds-WP_001278668.1;Parent=gene-SO06_RS13040;Dbxref=GenBank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=SO06_RS13040;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 180118 180741 . - . ID=gene-SO06_RS13045;Name=SO06_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13045 NZ_MYDG01000008.1 Protein Homology CDS 180118 180741 . - 0 ID=cds-WP_000964234.1;Parent=gene-SO06_RS13045;Dbxref=GenBank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=SO06_RS13045;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 180778 181578 . - . ID=gene-SO06_RS13050;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=SO06_RS13050 NZ_MYDG01000008.1 Protein Homology CDS 180778 181578 . - 0 ID=cds-WP_023232651.1;Parent=gene-SO06_RS13050;Dbxref=GenBank:WP_023232651.1;Name=WP_023232651.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=SO06_RS13050;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_023232651.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 181571 182269 . - . ID=gene-SO06_RS13055;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=SO06_RS13055 NZ_MYDG01000008.1 Protein Homology CDS 181571 182269 . - 0 ID=cds-WP_000689822.1;Parent=gene-SO06_RS13055;Dbxref=GenBank:WP_000689822.1;Name=WP_000689822.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=SO06_RS13055;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689822.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 182354 183871 . + . ID=gene-SO06_RS13060;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=SO06_RS13060 NZ_MYDG01000008.1 Protein Homology CDS 182354 183871 . + 0 ID=cds-WP_000146450.1;Parent=gene-SO06_RS13060;Dbxref=GenBank:WP_000146450.1;Name=WP_000146450.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=SO06_RS13060;product=dGTPase;protein_id=WP_000146450.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 184001 185428 . + . ID=gene-SO06_RS13065;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=SO06_RS13065 NZ_MYDG01000008.1 Protein Homology CDS 184001 185428 . + 0 ID=cds-WP_000753958.1;Parent=gene-SO06_RS13065;Dbxref=GenBank:WP_000753958.1;Name=WP_000753958.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=SO06_RS13065;product=serine endoprotease DegP;protein_id=WP_000753958.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 185581 186738 . + . ID=gene-SO06_RS13070;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=SO06_RS13070 NZ_MYDG01000008.1 Protein Homology CDS 185581 186738 . + 0 ID=cds-WP_000929420.1;Parent=gene-SO06_RS13070;Dbxref=GenBank:WP_000929420.1;Name=WP_000929420.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=SO06_RS13070;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929420.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 186827 187213 . - . ID=gene-SO06_RS13075;Name=SO06_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13075 NZ_MYDG01000008.1 Protein Homology CDS 186827 187213 . - 0 ID=cds-WP_000272193.1;Parent=gene-SO06_RS13075;Dbxref=GenBank:WP_000272193.1;Name=WP_000272193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=SO06_RS13075;product=DUF3461 family protein;protein_id=WP_000272193.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 187460 188761 . + . ID=gene-SO06_RS13080;Name=SO06_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13080 NZ_MYDG01000008.1 Protein Homology CDS 187460 188761 . + 0 ID=cds-WP_023232652.1;Parent=gene-SO06_RS13080;Dbxref=GenBank:WP_023232652.1;Name=WP_023232652.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=SO06_RS13080;product=MFS transporter;protein_id=WP_023232652.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 188798 189622 . - . ID=gene-SO06_RS13085;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=SO06_RS13085 NZ_MYDG01000008.1 Protein Homology CDS 188798 189622 . - 0 ID=cds-WP_001186673.1;Parent=gene-SO06_RS13085;Dbxref=GenBank:WP_001186673.1;Name=WP_001186673.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=SO06_RS13085;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186673.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 189652 192324 . - . ID=gene-SO06_RS13090;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=SO06_RS13090 NZ_MYDG01000008.1 Protein Homology CDS 189652 192324 . - 0 ID=cds-WP_001094519.1;Parent=gene-SO06_RS13090;Dbxref=GenBank:WP_001094519.1;Name=WP_001094519.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=SO06_RS13090;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094519.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 192562 193356 . - . ID=gene-SO06_RS13100;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=SO06_RS13100 NZ_MYDG01000008.1 Protein Homology CDS 192562 193356 . - 0 ID=cds-WP_001018214.1;Parent=gene-SO06_RS13100;Dbxref=GenBank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=SO06_RS13100;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 193807 194532 . + . ID=gene-SO06_RS13110;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=SO06_RS13110 NZ_MYDG01000008.1 Protein Homology CDS 193807 194532 . + 0 ID=cds-WP_000246886.1;Parent=gene-SO06_RS13110;Dbxref=GenBank:WP_000246886.1;Name=WP_000246886.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=SO06_RS13110;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 194790 195641 . + . ID=gene-SO06_RS13120;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=SO06_RS13120 NZ_MYDG01000008.1 Protein Homology CDS 194790 195641 . + 0 ID=cds-WP_000808106.1;Parent=gene-SO06_RS13120;Dbxref=GenBank:WP_000808106.1;Name=WP_000808106.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=SO06_RS13120;product=translation elongation factor Ts;protein_id=WP_000808106.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 195786 196511 . + . ID=gene-SO06_RS13125;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=SO06_RS13125 NZ_MYDG01000008.1 Protein Homology CDS 195786 196511 . + 0 ID=cds-WP_000224567.1;Parent=gene-SO06_RS13125;Dbxref=GenBank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=SO06_RS13125;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 196658 197215 . + . ID=gene-SO06_RS13130;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=SO06_RS13130 NZ_MYDG01000008.1 Protein Homology CDS 196658 197215 . + 0 ID=cds-WP_000622423.1;Parent=gene-SO06_RS13130;Dbxref=GenBank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=SO06_RS13130;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 197357 198553 . + . ID=gene-SO06_RS13135;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=SO06_RS13135 NZ_MYDG01000008.1 Protein Homology CDS 197357 198553 . + 0 ID=cds-WP_000811904.1;Parent=gene-SO06_RS13135;Dbxref=GenBank:WP_000811904.1;Name=WP_000811904.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=SO06_RS13135;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811904.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 198866 199624 . + . ID=gene-SO06_RS13145;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=SO06_RS13145 NZ_MYDG01000008.1 Protein Homology CDS 198866 199624 . + 0 ID=cds-WP_000947413.1;Parent=gene-SO06_RS13145;Dbxref=GenBank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=SO06_RS13145;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 199637 200494 . + . ID=gene-SO06_RS13150;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=SO06_RS13150 NZ_MYDG01000008.1 Protein Homology CDS 199637 200494 . + 0 ID=cds-WP_000922422.1;Parent=gene-SO06_RS13150;Dbxref=GenBank:WP_000922422.1;Name=WP_000922422.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=SO06_RS13150;product=phosphatidate cytidylyltransferase;protein_id=WP_000922422.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 200506 201858 . + . ID=gene-SO06_RS13155;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=SO06_RS13155 NZ_MYDG01000008.1 Protein Homology CDS 200506 201858 . + 0 ID=cds-WP_000949017.1;Parent=gene-SO06_RS13155;Dbxref=GenBank:WP_000949017.1;Name=WP_000949017.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=SO06_RS13155;product=sigma E protease regulator RseP;protein_id=WP_000949017.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 201890 204301 . + . ID=gene-SO06_RS13160;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=SO06_RS13160 NZ_MYDG01000008.1 Protein Homology CDS 201890 204301 . + 0 ID=cds-WP_001240923.1;Parent=gene-SO06_RS13160;Dbxref=GenBank:WP_001240923.1;Name=WP_001240923.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=SO06_RS13160;product=outer membrane protein assembly factor BamA;protein_id=WP_001240923.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 204424 204909 . + . ID=gene-SO06_RS13165;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=SO06_RS13165 NZ_MYDG01000008.1 Protein Homology CDS 204424 204909 . + 0 ID=cds-WP_000758966.1;Parent=gene-SO06_RS13165;Dbxref=GenBank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=SO06_RS13165;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 204913 205938 . + . ID=gene-SO06_RS13170;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=SO06_RS13170 NZ_MYDG01000008.1 Protein Homology CDS 204913 205938 . + 0 ID=cds-WP_023232653.1;Parent=gene-SO06_RS13170;Dbxref=GenBank:WP_023232653.1;Name=WP_023232653.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=SO06_RS13170;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_023232653.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 206044 206499 . + . ID=gene-SO06_RS13175;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=SO06_RS13175 NZ_MYDG01000008.1 Protein Homology CDS 206044 206499 . + 0 ID=cds-WP_000210741.1;Parent=gene-SO06_RS13175;Dbxref=GenBank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=SO06_RS13175;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 206503 207291 . + . ID=gene-SO06_RS13180;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=SO06_RS13180 NZ_MYDG01000008.1 Protein Homology CDS 206503 207291 . + 0 ID=cds-WP_000565950.1;Parent=gene-SO06_RS13180;Dbxref=GenBank:WP_000565950.1;Name=WP_000565950.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=SO06_RS13180;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565950.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 207291 208439 . + . ID=gene-SO06_RS13185;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=SO06_RS13185 NZ_MYDG01000008.1 Protein Homology CDS 207291 208439 . + 0 ID=cds-WP_000741216.1;Parent=gene-SO06_RS13185;Dbxref=GenBank:WP_000741216.1;Name=WP_000741216.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=SO06_RS13185;product=lipid-A-disaccharide synthase;protein_id=WP_000741216.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 208436 209032 . + . ID=gene-SO06_RS13190;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=SO06_RS13190 NZ_MYDG01000008.1 Protein Homology CDS 208436 209032 . + 0 ID=cds-WP_000569411.1;Parent=gene-SO06_RS13190;Dbxref=GenBank:WP_000569411.1;Name=WP_000569411.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=SO06_RS13190;product=ribonuclease HII;protein_id=WP_000569411.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 209056 212538 . + . ID=gene-SO06_RS13195;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=SO06_RS13195 NZ_MYDG01000008.1 Protein Homology CDS 209056 212538 . + 0 ID=cds-WP_023232654.1;Parent=gene-SO06_RS13195;Dbxref=GenBank:WP_023232654.1;Name=WP_023232654.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=SO06_RS13195;product=DNA polymerase III subunit alpha;protein_id=WP_023232654.1;transl_table=11 NZ_MYDG01000008.1 RefSeq gene 212551 213510 . + . ID=gene-SO06_RS13200;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=SO06_RS13200 NZ_MYDG01000008.1 Protein Homology CDS 212551 213510 . + 0 ID=cds-WP_000055753.1;Parent=gene-SO06_RS13200;Dbxref=GenBank:WP_000055753.1;Name=WP_000055753.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=SO06_RS13200;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11 ##sequence-region NZ_MYDG01000009.1 1 212779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28144 NZ_MYDG01000009.1 RefSeq region 1 212779 . + . ID=NZ_MYDG01000009.1:1..212779;Dbxref=taxon:28144;collected-by=Technical University Of Denmark;collection-date=2009;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=chicken;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Derby;strain=BCW_2674;sub-species=enterica NZ_MYDG01000009.1 RefSeq gene 171 2162 . - . ID=gene-SO06_RS13205;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=SO06_RS13205 NZ_MYDG01000009.1 Protein Homology CDS 171 2162 . - 0 ID=cds-WP_023181533.1;Parent=gene-SO06_RS13205;Dbxref=GenBank:WP_023181533.1;Name=WP_023181533.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=SO06_RS13205;product=transketolase;protein_id=WP_023181533.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 2438 3196 . + . ID=gene-SO06_RS13210;Name=SO06_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13210 NZ_MYDG01000009.1 Protein Homology CDS 2438 3196 . + 0 ID=cds-WP_000701830.1;Parent=gene-SO06_RS13210;Dbxref=GenBank:WP_000701830.1;Name=WP_000701830.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=SO06_RS13210;product=M48 family metallopeptidase;protein_id=WP_000701830.1;transl_table=11 NZ_MYDG01000009.1 RefSeq pseudogene 3209 3293 . - . ID=gene-SO06_RS25795;Name=SO06_RS25795;end_range=3293,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25795;partial=true;pseudo=true;start_range=.,3209 NZ_MYDG01000009.1 Protein Homology CDS 3209 3293 . - 0 ID=cds-SO06_RS25795;Parent=gene-SO06_RS25795;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3293,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=SO06_RS25795;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3209;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 3297 4217 . - . ID=gene-SO06_RS13215;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=SO06_RS13215 NZ_MYDG01000009.1 Protein Homology CDS 3297 4217 . - 0 ID=cds-WP_000105550.1;Parent=gene-SO06_RS13215;Dbxref=GenBank:WP_000105550.1;Name=WP_000105550.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=SO06_RS13215;product=agmatinase;protein_id=WP_000105550.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 4422 5348 . - . ID=gene-SO06_RS13220;Name=SO06_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13220 NZ_MYDG01000009.1 Protein Homology CDS 4422 5348 . - 0 ID=cds-WP_080204244.1;Parent=gene-SO06_RS13220;Dbxref=GenBank:WP_080204244.1;Name=WP_080204244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465464.1;locus_tag=SO06_RS13220;product=alpha/beta fold hydrolase;protein_id=WP_080204244.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 5572 6066 . - . ID=gene-SO06_RS13225;Name=SO06_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13225 NZ_MYDG01000009.1 Protein Homology CDS 5572 6066 . - 0 ID=cds-WP_080204245.1;Parent=gene-SO06_RS13225;Dbxref=GenBank:WP_080204245.1;Name=WP_080204245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001839091.1;locus_tag=SO06_RS13225;product=YhcH/YjgK/YiaL family protein;protein_id=WP_080204245.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 6105 7112 . - . ID=gene-SO06_RS13230;Name=SO06_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13230 NZ_MYDG01000009.1 Protein Homology CDS 6105 7112 . - 0 ID=cds-WP_000104231.1;Parent=gene-SO06_RS13230;Dbxref=GenBank:WP_000104231.1;Name=WP_000104231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=SO06_RS13230;product=Ldh family oxidoreductase;protein_id=WP_000104231.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 7126 8142 . - . ID=gene-SO06_RS13235;Name=SO06_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13235 NZ_MYDG01000009.1 Protein Homology CDS 7126 8142 . - 0 ID=cds-WP_000853913.1;Parent=gene-SO06_RS13235;Dbxref=GenBank:WP_000853913.1;Name=WP_000853913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=SO06_RS13235;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000853913.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 8145 9617 . - . ID=gene-SO06_RS13240;Name=SO06_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13240 NZ_MYDG01000009.1 Protein Homology CDS 8145 9617 . - 0 ID=cds-WP_000379526.1;Parent=gene-SO06_RS13240;Dbxref=GenBank:WP_000379526.1;Name=WP_000379526.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=SO06_RS13240;product=mannitol dehydrogenase family protein;protein_id=WP_000379526.1;transl_table=11 NZ_MYDG01000009.1 RefSeq pseudogene 10267 10536 . + . ID=gene-SO06_RS25645;Name=SO06_RS25645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25645;pseudo=true NZ_MYDG01000009.1 Protein Homology CDS 10267 10536 . + 0 ID=cds-SO06_RS25645;Parent=gene-SO06_RS25645;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.6;locus_tag=SO06_RS25645;product=hypothetical protein;pseudo=true;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 10851 11651 . - . ID=gene-SO06_RS13250;Name=SO06_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13250 NZ_MYDG01000009.1 Protein Homology CDS 10851 11651 . - 0 ID=cds-WP_001576357.1;Parent=gene-SO06_RS13250;Dbxref=GenBank:WP_001576357.1;Name=WP_001576357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=SO06_RS13250;product=FadR/GntR family transcriptional regulator;protein_id=WP_001576357.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 11805 12536 . - . ID=gene-SO06_RS13255;Name=SO06_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13255 NZ_MYDG01000009.1 Protein Homology CDS 11805 12536 . - 0 ID=cds-WP_000032796.1;Parent=gene-SO06_RS13255;Dbxref=GenBank:WP_000032796.1;Name=WP_000032796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=SO06_RS13255;product=hypothetical protein;protein_id=WP_000032796.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 12680 14656 . - . ID=gene-SO06_RS13260;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=SO06_RS13260 NZ_MYDG01000009.1 Protein Homology CDS 12680 14656 . - 0 ID=cds-WP_001278580.1;Parent=gene-SO06_RS13260;Dbxref=GenBank:WP_001278580.1;Name=WP_001278580.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=SO06_RS13260;product=biosynthetic arginine decarboxylase;protein_id=WP_001278580.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 14665 14796 . - . ID=gene-SO06_RS13265;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=SO06_RS13265 NZ_MYDG01000009.1 Protein Homology CDS 14665 14796 . - 0 ID=cds-WP_000729109.1;Parent=gene-SO06_RS13265;Dbxref=GenBank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=SO06_RS13265;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 14882 15031 . - . ID=gene-SO06_RS25650;Name=SO06_RS25650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25650 NZ_MYDG01000009.1 Protein Homology CDS 14882 15031 . - 0 ID=cds-WP_001751809.1;Parent=gene-SO06_RS25650;Dbxref=GenBank:WP_001751809.1;Name=WP_001751809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=SO06_RS25650;product=hypothetical protein;protein_id=WP_001751809.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 15091 15390 . - . ID=gene-SO06_RS13275;Name=SO06_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13275 NZ_MYDG01000009.1 GeneMarkS-2+ CDS 15091 15390 . - 0 ID=cds-WP_001543499.1;Parent=gene-SO06_RS13275;Dbxref=GenBank:WP_001543499.1;Name=WP_001543499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS13275;product=hypothetical protein;protein_id=WP_001543499.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 15446 16600 . + . ID=gene-SO06_RS13280;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=SO06_RS13280 NZ_MYDG01000009.1 Protein Homology CDS 15446 16600 . + 0 ID=cds-WP_001062140.1;Parent=gene-SO06_RS13280;Dbxref=GenBank:WP_001062140.1;Name=WP_001062140.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=SO06_RS13280;product=methionine adenosyltransferase;protein_id=WP_001062140.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 17093 18487 . + . ID=gene-SO06_RS13285;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=SO06_RS13285 NZ_MYDG01000009.1 Protein Homology CDS 17093 18487 . + 0 ID=cds-WP_001113171.1;Parent=gene-SO06_RS13285;Dbxref=GenBank:WP_001113171.1;Name=WP_001113171.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=SO06_RS13285;product=galactose/proton symporter;protein_id=WP_001113171.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 18566 19063 . + . ID=gene-SO06_RS13290;Name=SO06_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13290 NZ_MYDG01000009.1 Protein Homology CDS 18566 19063 . + 0 ID=cds-WP_000856775.1;Parent=gene-SO06_RS13290;Dbxref=GenBank:WP_000856775.1;Name=WP_000856775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=SO06_RS13290;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000856775.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 19159 19866 . + . ID=gene-SO06_RS13295;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=SO06_RS13295 NZ_MYDG01000009.1 Protein Homology CDS 19159 19866 . + 0 ID=cds-WP_023232637.1;Parent=gene-SO06_RS13295;Dbxref=GenBank:WP_023232637.1;Name=WP_023232637.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=SO06_RS13295;product=deoxyribonuclease I;protein_id=WP_023232637.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 19943 20674 . + . ID=gene-SO06_RS13300;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=SO06_RS13300 NZ_MYDG01000009.1 Protein Homology CDS 19943 20674 . + 0 ID=cds-WP_001675718.1;Parent=gene-SO06_RS13300;Dbxref=GenBank:WP_001675718.1;Name=WP_001675718.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=SO06_RS13300;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001675718.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 20694 21641 . + . ID=gene-SO06_RS13305;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=SO06_RS13305 NZ_MYDG01000009.1 Protein Homology CDS 20694 21641 . + 0 ID=cds-WP_023232636.1;Parent=gene-SO06_RS13305;Dbxref=GenBank:WP_023232636.1;Name=WP_023232636.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=SO06_RS13305;product=glutathione synthase;protein_id=WP_023232636.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 21857 22420 . + . ID=gene-SO06_RS13310;Name=SO06_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13310 NZ_MYDG01000009.1 Protein Homology CDS 21857 22420 . + 0 ID=cds-WP_001053167.1;Parent=gene-SO06_RS13310;Dbxref=GenBank:WP_001053167.1;Name=WP_001053167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=SO06_RS13310;product=YqgE/AlgH family protein;protein_id=WP_001053167.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 22420 22836 . + . ID=gene-SO06_RS13315;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=SO06_RS13315 NZ_MYDG01000009.1 Protein Homology CDS 22420 22836 . + 0 ID=cds-WP_001285491.1;Parent=gene-SO06_RS13315;Dbxref=GenBank:WP_001285491.1;Name=WP_001285491.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=SO06_RS13315;product=Holliday junction resolvase RuvX;protein_id=WP_001285491.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 22883 23569 . - . ID=gene-SO06_RS13320;Name=SO06_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13320 NZ_MYDG01000009.1 Protein Homology CDS 22883 23569 . - 0 ID=cds-WP_023202165.1;Parent=gene-SO06_RS13320;Dbxref=GenBank:WP_023202165.1;Name=WP_023202165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=SO06_RS13320;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_023202165.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 23699 24679 . - . ID=gene-SO06_RS13325;Name=SO06_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13325 NZ_MYDG01000009.1 Protein Homology CDS 23699 24679 . - 0 ID=cds-WP_001055642.1;Parent=gene-SO06_RS13325;Dbxref=GenBank:WP_001055642.1;Name=WP_001055642.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=SO06_RS13325;product=type IV pilus twitching motility protein PilT;protein_id=WP_001055642.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 24697 25401 . + . ID=gene-SO06_RS13330;Name=SO06_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13330 NZ_MYDG01000009.1 Protein Homology CDS 24697 25401 . + 0 ID=cds-WP_000997812.1;Parent=gene-SO06_RS13330;Dbxref=GenBank:WP_000997812.1;Name=WP_000997812.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=SO06_RS13330;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997812.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 25420 25986 . + . ID=gene-SO06_RS13335;Name=SO06_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13335 NZ_MYDG01000009.1 Protein Homology CDS 25420 25986 . + 0 ID=cds-WP_001094848.1;Parent=gene-SO06_RS13335;Dbxref=GenBank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=SO06_RS13335;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 25983 26273 . + . ID=gene-SO06_RS13340;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=SO06_RS13340 NZ_MYDG01000009.1 Protein Homology CDS 25983 26273 . + 0 ID=cds-WP_001277203.1;Parent=gene-SO06_RS13340;Dbxref=GenBank:WP_001277203.1;Name=WP_001277203.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=SO06_RS13340;product=DUF167 family protein YggU;protein_id=WP_001277203.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 26281 26874 . + . ID=gene-SO06_RS13345;Name=SO06_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13345 NZ_MYDG01000009.1 Protein Homology CDS 26281 26874 . + 0 ID=cds-WP_001174769.1;Parent=gene-SO06_RS13345;Dbxref=GenBank:WP_001174769.1;Name=WP_001174769.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=SO06_RS13345;product=XTP/dITP diphosphatase;protein_id=WP_001174769.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 26867 28003 . + . ID=gene-SO06_RS13350;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=SO06_RS13350 NZ_MYDG01000009.1 Protein Homology CDS 26867 28003 . + 0 ID=cds-WP_023138753.1;Parent=gene-SO06_RS13350;Dbxref=GenBank:WP_023138753.1;Name=WP_023138753.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=SO06_RS13350;product=radical SAM family heme chaperone HemW;protein_id=WP_023138753.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 28095 29102 . - . ID=gene-SO06_RS13355;Name=SO06_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13355 NZ_MYDG01000009.1 Protein Homology CDS 28095 29102 . - 0 ID=cds-WP_000252197.1;Parent=gene-SO06_RS13355;Dbxref=GenBank:WP_000252197.1;Name=WP_000252197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=SO06_RS13355;product=DUF1202 domain-containing protein;protein_id=WP_000252197.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 29235 30281 . - . ID=gene-SO06_RS13360;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=SO06_RS13360 NZ_MYDG01000009.1 Protein Homology CDS 29235 30281 . - 0 ID=cds-WP_000394189.1;Parent=gene-SO06_RS13360;Dbxref=GenBank:WP_000394189.1;Name=WP_000394189.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=SO06_RS13360;product=L-asparaginase 2;protein_id=WP_000394189.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 30470 31189 . - . ID=gene-SO06_RS13365;Name=SO06_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13365 NZ_MYDG01000009.1 Protein Homology CDS 30470 31189 . - 0 ID=cds-WP_000984827.1;Parent=gene-SO06_RS13365;Dbxref=GenBank:WP_000984827.1;Name=WP_000984827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=SO06_RS13365;product=DUF2884 domain-containing protein;protein_id=WP_000984827.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 31239 31565 . - . ID=gene-SO06_RS13370;Name=SO06_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13370 NZ_MYDG01000009.1 Protein Homology CDS 31239 31565 . - 0 ID=cds-WP_001107574.1;Parent=gene-SO06_RS13370;Dbxref=GenBank:WP_001107574.1;Name=WP_001107574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=SO06_RS13370;product=YggL family protein;protein_id=WP_001107574.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 31565 32284 . - . ID=gene-SO06_RS13375;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=SO06_RS13375 NZ_MYDG01000009.1 Protein Homology CDS 31565 32284 . - 0 ID=cds-WP_000786893.1;Parent=gene-SO06_RS13375;Dbxref=GenBank:WP_000786893.1;Name=WP_000786893.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=SO06_RS13375;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786893.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 32439 33491 . + . ID=gene-SO06_RS13385;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=SO06_RS13385 NZ_MYDG01000009.1 Protein Homology CDS 32439 33491 . + 0 ID=cds-WP_080204246.1;Parent=gene-SO06_RS13385;Dbxref=GenBank:WP_080204246.1;Name=WP_080204246.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=SO06_RS13385;product=A/G-specific adenine glycosylase;protein_id=WP_080204246.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 33519 33794 . + . ID=gene-SO06_RS13390;Name=SO06_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13390 NZ_MYDG01000009.1 Protein Homology CDS 33519 33794 . + 0 ID=cds-WP_000091706.1;Parent=gene-SO06_RS13390;Dbxref=GenBank:WP_000091706.1;Name=WP_000091706.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=SO06_RS13390;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 33907 34992 . + . ID=gene-SO06_RS13395;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=SO06_RS13395 NZ_MYDG01000009.1 Protein Homology CDS 33907 34992 . + 0 ID=cds-WP_001650652.1;Parent=gene-SO06_RS13395;Dbxref=GenBank:WP_001650652.1;Name=WP_001650652.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=SO06_RS13395;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_001650652.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 35209 36465 . + . ID=gene-SO06_RS13400;Name=SO06_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13400 NZ_MYDG01000009.1 Protein Homology CDS 35209 36465 . + 0 ID=cds-WP_001049804.1;Parent=gene-SO06_RS13400;Dbxref=GenBank:WP_001049804.1;Name=WP_001049804.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=SO06_RS13400;product=nucleoside permease;protein_id=WP_001049804.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 36527 38662 . - . ID=gene-SO06_RS13405;Name=SO06_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13405 NZ_MYDG01000009.1 Protein Homology CDS 36527 38662 . - 0 ID=cds-WP_080204247.1;Parent=gene-SO06_RS13405;Dbxref=GenBank:WP_080204247.1;Name=WP_080204247.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=SO06_RS13405;product=ornithine decarboxylase;protein_id=WP_080204247.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 39088 39795 . + . ID=gene-SO06_RS13415;Name=SO06_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13415 NZ_MYDG01000009.1 Protein Homology CDS 39088 39795 . + 0 ID=cds-WP_000234466.1;Parent=gene-SO06_RS13415;Dbxref=GenBank:WP_000234466.1;Name=WP_000234466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=SO06_RS13415;product=DUF554 domain-containing protein;protein_id=WP_000234466.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 39901 39976 . + . ID=gene-SO06_RS13420;Name=SO06_RS13420;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS13420 NZ_MYDG01000009.1 tRNAscan-SE tRNA 39901 39976 . + . ID=rna-SO06_RS13420;Parent=gene-SO06_RS13420;anticodon=(pos:39934..39936);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS13420;product=tRNA-Phe NZ_MYDG01000009.1 tRNAscan-SE exon 39901 39976 . + . ID=exon-SO06_RS13420-1;Parent=rna-SO06_RS13420;anticodon=(pos:39934..39936);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS13420;product=tRNA-Phe NZ_MYDG01000009.1 RefSeq pseudogene 40136 40363 . + . ID=gene-SO06_RS25575;Name=SO06_RS25575;end_range=40363,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25575;partial=true;pseudo=true NZ_MYDG01000009.1 Protein Homology CDS 40136 40363 . + 0 ID=cds-SO06_RS25575;Parent=gene-SO06_RS25575;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=40363,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005975783.1;locus_tag=SO06_RS25575;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 40637 41542 . - . ID=gene-SO06_RS13430;Name=SO06_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13430 NZ_MYDG01000009.1 Protein Homology CDS 40637 41542 . - 0 ID=cds-WP_023232634.1;Parent=gene-SO06_RS13430;Dbxref=GenBank:WP_023232634.1;Name=WP_023232634.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441073.1;locus_tag=SO06_RS13430;product=LysR family transcriptional regulator;protein_id=WP_023232634.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 41643 42266 . + . ID=gene-SO06_RS13435;Name=SO06_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13435 NZ_MYDG01000009.1 Protein Homology CDS 41643 42266 . + 0 ID=cds-WP_023232633.1;Parent=gene-SO06_RS13435;Dbxref=GenBank:WP_023232633.1;Name=WP_023232633.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697438.1;locus_tag=SO06_RS13435;product=FMN-dependent NADH-azoreductase;protein_id=WP_023232633.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 42292 42555 . + . ID=gene-SO06_RS13440;Name=SO06_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13440 NZ_MYDG01000009.1 Protein Homology CDS 42292 42555 . + 0 ID=cds-WP_001027081.1;Parent=gene-SO06_RS13440;Dbxref=GenBank:WP_001027081.1;Name=WP_001027081.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018986.6;locus_tag=SO06_RS13440;product=YdgH/BhsA/McbA-like domain containing protein;protein_id=WP_001027081.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 42631 43950 . + . ID=gene-SO06_RS13445;Name=SO06_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13445 NZ_MYDG01000009.1 Protein Homology CDS 42631 43950 . + 0 ID=cds-WP_024148531.1;Parent=gene-SO06_RS13445;Dbxref=GenBank:WP_024148531.1;Name=WP_024148531.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534139.1;locus_tag=SO06_RS13445;product=ferredoxin reductase family protein;protein_id=WP_024148531.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 45663 46346 . + . ID=gene-SO06_RS13465;Name=SO06_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13465 NZ_MYDG01000009.1 Protein Homology CDS 45663 46346 . + 0 ID=cds-WP_023232630.1;Parent=gene-SO06_RS13465;Dbxref=GenBank:WP_023232630.1;Name=WP_023232630.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=SO06_RS13465;product=helix-turn-helix transcriptional regulator;protein_id=WP_023232630.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 46450 47007 . - . ID=gene-SO06_RS13470;Name=SO06_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13470 NZ_MYDG01000009.1 Protein Homology CDS 46450 47007 . - 0 ID=cds-WP_023232629.1;Parent=gene-SO06_RS13470;Dbxref=GenBank:WP_023232629.1;Name=WP_023232629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=SO06_RS13470;product=DUF3156 family protein;protein_id=WP_023232629.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 46985 48484 . - . ID=gene-SO06_RS13475;Name=SO06_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13475 NZ_MYDG01000009.1 Protein Homology CDS 46985 48484 . - 0 ID=cds-WP_000475960.1;Parent=gene-SO06_RS13475;Dbxref=GenBank:WP_000475960.1;Name=WP_000475960.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=SO06_RS13475;product=APC family permease;protein_id=WP_000475960.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 48693 49067 . - . ID=gene-SO06_RS13480;Name=SO06_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13480 NZ_MYDG01000009.1 Protein Homology CDS 48693 49067 . - 0 ID=cds-WP_000542984.1;Parent=gene-SO06_RS13480;Dbxref=GenBank:WP_000542984.1;Name=WP_000542984.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=SO06_RS13480;product=cupin domain-containing protein;protein_id=WP_000542984.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 49082 50383 . - . ID=gene-SO06_RS13485;Name=SO06_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13485 NZ_MYDG01000009.1 Protein Homology CDS 49082 50383 . - 0 ID=cds-WP_001092825.1;Parent=gene-SO06_RS13485;Dbxref=GenBank:WP_001092825.1;Name=WP_001092825.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=SO06_RS13485;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001092825.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 50545 52029 . + . ID=gene-SO06_RS13490;Name=SO06_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13490 NZ_MYDG01000009.1 Protein Homology CDS 50545 52029 . + 0 ID=cds-WP_023232628.1;Parent=gene-SO06_RS13490;Dbxref=GenBank:WP_023232628.1;Name=WP_023232628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=SO06_RS13490;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=WP_023232628.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 52166 52546 . - . ID=gene-SO06_RS13495;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=SO06_RS13495 NZ_MYDG01000009.1 Protein Homology CDS 52166 52546 . - 0 ID=cds-WP_001543513.1;Parent=gene-SO06_RS13495;Dbxref=GenBank:WP_001543513.1;Name=WP_001543513.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=SO06_RS13495;product=anti-adapter protein IraD;protein_id=WP_001543513.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 52546 53031 . - . ID=gene-SO06_RS13500;Name=SO06_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13500 NZ_MYDG01000009.1 Protein Homology CDS 52546 53031 . - 0 ID=cds-WP_000338753.1;Parent=gene-SO06_RS13500;Dbxref=GenBank:WP_000338753.1;Name=WP_000338753.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=SO06_RS13500;product=Hcp family type VI secretion system effector;protein_id=WP_000338753.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 53756 54679 . - . ID=gene-SO06_RS13510;Name=SO06_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13510 NZ_MYDG01000009.1 Protein Homology CDS 53756 54679 . - 0 ID=cds-WP_000540892.1;Parent=gene-SO06_RS13510;Dbxref=GenBank:WP_000540892.1;Name=WP_000540892.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=SO06_RS13510;product=polysaccharide deacetylase family protein;protein_id=WP_000540892.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 54718 55596 . - . ID=gene-SO06_RS13515;Name=SO06_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13515 NZ_MYDG01000009.1 Protein Homology CDS 54718 55596 . - 0 ID=cds-WP_023232627.1;Parent=gene-SO06_RS13515;Dbxref=GenBank:WP_023232627.1;Name=WP_023232627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=SO06_RS13515;product=carbon-nitrogen hydrolase family protein;protein_id=WP_023232627.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 55991 57295 . - . ID=gene-SO06_RS13520;Name=SO06_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13520 NZ_MYDG01000009.1 Protein Homology CDS 55991 57295 . - 0 ID=cds-WP_000784371.1;Parent=gene-SO06_RS13520;Dbxref=GenBank:WP_000784371.1;Name=WP_000784371.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=SO06_RS13520;product=MFS transporter;protein_id=WP_000784371.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 57699 58883 . + . ID=gene-SO06_RS13525;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=SO06_RS13525 NZ_MYDG01000009.1 Protein Homology CDS 57699 58883 . + 0 ID=cds-WP_000815487.1;Parent=gene-SO06_RS13525;Dbxref=GenBank:WP_000815487.1;Name=WP_000815487.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=SO06_RS13525;product=mannonate dehydratase;protein_id=WP_000815487.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 58994 60466 . + . ID=gene-SO06_RS13530;Name=SO06_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13530 NZ_MYDG01000009.1 Protein Homology CDS 58994 60466 . + 0 ID=cds-WP_023232626.1;Parent=gene-SO06_RS13530;Dbxref=GenBank:WP_023232626.1;Name=WP_023232626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=SO06_RS13530;product=fructuronate reductase;protein_id=WP_023232626.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 60478 61890 . + . ID=gene-SO06_RS13535;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=SO06_RS13535 NZ_MYDG01000009.1 Protein Homology CDS 60478 61890 . + 0 ID=cds-WP_000190180.1;Parent=gene-SO06_RS13535;Dbxref=GenBank:WP_000190180.1;Name=WP_000190180.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=SO06_RS13535;product=glucuronate isomerase;protein_id=WP_000190180.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 62190 63248 . - . ID=gene-SO06_RS13540;Name=SO06_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13540 NZ_MYDG01000009.1 Protein Homology CDS 62190 63248 . - 0 ID=cds-WP_000475246.1;Parent=gene-SO06_RS13540;Dbxref=GenBank:WP_000475246.1;Name=WP_000475246.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=SO06_RS13540;product=methyl-accepting chemotaxis protein;protein_id=WP_000475246.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 63918 65774 . - . ID=gene-SO06_RS13550;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=SO06_RS13550 NZ_MYDG01000009.1 Protein Homology CDS 63918 65774 . - 0 ID=cds-WP_017466052.1;Parent=gene-SO06_RS13550;Dbxref=GenBank:WP_017466052.1;Name=WP_017466052.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=SO06_RS13550;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_017466052.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 66001 66867 . + . ID=gene-SO06_RS13555;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=SO06_RS13555 NZ_MYDG01000009.1 Protein Homology CDS 66001 66867 . + 0 ID=cds-WP_023232625.1;Parent=gene-SO06_RS13555;Dbxref=GenBank:WP_023232625.1;Name=WP_023232625.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=SO06_RS13555;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_023232625.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 66935 67645 . - . ID=gene-SO06_RS13560;Name=SO06_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13560 NZ_MYDG01000009.1 Protein Homology CDS 66935 67645 . - 0 ID=cds-WP_023232624.1;Parent=gene-SO06_RS13560;Dbxref=GenBank:WP_023232624.1;Name=WP_023232624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=SO06_RS13560;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_023232624.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 67645 68697 . - . ID=gene-SO06_RS13565;Name=SO06_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13565 NZ_MYDG01000009.1 Protein Homology CDS 67645 68697 . - 0 ID=cds-WP_001630770.1;Parent=gene-SO06_RS13565;Dbxref=GenBank:WP_001630770.1;Name=WP_001630770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=SO06_RS13565;product=ABC transporter substrate-binding protein;protein_id=WP_001630770.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 68773 69021 . - . ID=gene-SO06_RS13570;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=SO06_RS13570 NZ_MYDG01000009.1 Protein Homology CDS 68773 69021 . - 0 ID=cds-WP_000334887.1;Parent=gene-SO06_RS13570;Dbxref=GenBank:WP_000334887.1;Name=WP_000334887.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=SO06_RS13570;product=hydrogenase maturation factor HybG;protein_id=WP_000334887.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 69049 69390 . - . ID=gene-SO06_RS13575;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=SO06_RS13575 NZ_MYDG01000009.1 Protein Homology CDS 69049 69390 . - 0 ID=cds-WP_000544945.1;Parent=gene-SO06_RS13575;Dbxref=GenBank:WP_000544945.1;Name=WP_000544945.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=SO06_RS13575;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544945.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 69383 69871 . - . ID=gene-SO06_RS13580;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=SO06_RS13580 NZ_MYDG01000009.1 Protein Homology CDS 69383 69871 . - 0 ID=cds-WP_000004951.1;Parent=gene-SO06_RS13580;Dbxref=GenBank:WP_000004951.1;Name=WP_000004951.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=SO06_RS13580;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004951.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 69864 70358 . - . ID=gene-SO06_RS13585;Name=SO06_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13585 NZ_MYDG01000009.1 Protein Homology CDS 69864 70358 . - 0 ID=cds-WP_001221960.1;Parent=gene-SO06_RS13585;Dbxref=GenBank:WP_001221960.1;Name=WP_001221960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=SO06_RS13585;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221960.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 70358 72061 . - . ID=gene-SO06_RS13590;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=SO06_RS13590 NZ_MYDG01000009.1 Protein Homology CDS 70358 72061 . - 0 ID=cds-WP_000083044.1;Parent=gene-SO06_RS13590;Dbxref=GenBank:WP_000083044.1;Name=WP_000083044.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=SO06_RS13590;product=hydrogenase 2 large subunit;protein_id=WP_000083044.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 72058 73236 . - . ID=gene-SO06_RS13595;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=SO06_RS13595 NZ_MYDG01000009.1 Protein Homology CDS 72058 73236 . - 0 ID=cds-WP_023232623.1;Parent=gene-SO06_RS13595;Dbxref=GenBank:WP_023232623.1;Name=WP_023232623.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=SO06_RS13595;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_023232623.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 73226 74212 . - . ID=gene-SO06_RS13600;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=SO06_RS13600 NZ_MYDG01000009.1 Protein Homology CDS 73226 74212 . - 0 ID=cds-WP_001081721.1;Parent=gene-SO06_RS13600;Dbxref=GenBank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=SO06_RS13600;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 74215 75333 . - . ID=gene-SO06_RS13605;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=SO06_RS13605 NZ_MYDG01000009.1 Protein Homology CDS 74215 75333 . - 0 ID=cds-WP_000145429.1;Parent=gene-SO06_RS13605;Dbxref=GenBank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=SO06_RS13605;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 75523 75810 . - . ID=gene-SO06_RS13615;Name=SO06_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13615 NZ_MYDG01000009.1 Protein Homology CDS 75523 75810 . - 0 ID=cds-WP_001059119.1;Parent=gene-SO06_RS13615;Dbxref=GenBank:WP_001059119.1;Name=WP_001059119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=SO06_RS13615;product=DUF2623 family protein;protein_id=WP_001059119.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 75895 77538 . - . ID=gene-SO06_RS13620;Name=SO06_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13620 NZ_MYDG01000009.1 Protein Homology CDS 75895 77538 . - 0 ID=cds-WP_023232622.1;Parent=gene-SO06_RS13620;Dbxref=GenBank:WP_023232622.1;Name=WP_023232622.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=SO06_RS13620;product=methyl-accepting chemotaxis protein;protein_id=WP_023232622.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 77845 78339 . - . ID=gene-SO06_RS13625;Name=SO06_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13625 NZ_MYDG01000009.1 Protein Homology CDS 77845 78339 . - 0 ID=cds-WP_000439335.1;Parent=gene-SO06_RS13625;Dbxref=GenBank:WP_000439335.1;Name=WP_000439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=SO06_RS13625;product=TIGR00645 family protein;protein_id=WP_000439335.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 78410 78913 . - . ID=gene-SO06_RS13630;Name=SO06_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13630 NZ_MYDG01000009.1 Protein Homology CDS 78410 78913 . - 0 ID=cds-WP_001534190.1;Parent=gene-SO06_RS13630;Dbxref=GenBank:WP_001534190.1;Name=WP_001534190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=SO06_RS13630;product=ESA_00282 family adhesion-associated protein;protein_id=WP_001534190.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 79017 79427 . + . ID=gene-SO06_RS13635;Name=SO06_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13635 NZ_MYDG01000009.1 Protein Homology CDS 79017 79427 . + 0 ID=cds-WP_023232620.1;Parent=gene-SO06_RS13635;Dbxref=GenBank:WP_023232620.1;Name=WP_023232620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=SO06_RS13635;product=hypothetical protein;protein_id=WP_023232620.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 79414 79818 . + . ID=gene-SO06_RS13640;Name=SO06_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13640 NZ_MYDG01000009.1 Protein Homology CDS 79414 79818 . + 0 ID=cds-WP_000665656.1;Parent=gene-SO06_RS13640;Dbxref=GenBank:WP_000665656.1;Name=WP_000665656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=SO06_RS13640;product=hypothetical protein;protein_id=WP_000665656.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 79942 80826 . + . ID=gene-SO06_RS13645;Name=SO06_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13645 NZ_MYDG01000009.1 Protein Homology CDS 79942 80826 . + 0 ID=cds-WP_000019032.1;Parent=gene-SO06_RS13645;Dbxref=GenBank:WP_000019032.1;Name=WP_000019032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=SO06_RS13645;product=SDR family oxidoreductase;protein_id=WP_000019032.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 80938 81363 . - . ID=gene-SO06_RS13650;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=SO06_RS13650 NZ_MYDG01000009.1 Protein Homology CDS 80938 81363 . - 0 ID=cds-WP_023232619.1;Parent=gene-SO06_RS13650;Dbxref=GenBank:WP_023232619.1;Name=WP_023232619.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=SO06_RS13650;product=TonB system transport protein ExbD;protein_id=WP_023232619.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 81370 82104 . - . ID=gene-SO06_RS13655;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=SO06_RS13655 NZ_MYDG01000009.1 Protein Homology CDS 81370 82104 . - 0 ID=cds-WP_000527859.1;Parent=gene-SO06_RS13655;Dbxref=GenBank:WP_000527859.1;Name=WP_000527859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=SO06_RS13655;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527859.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 82356 83543 . + . ID=gene-SO06_RS13665;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=SO06_RS13665 NZ_MYDG01000009.1 Protein Homology CDS 82356 83543 . + 0 ID=cds-WP_023259267.1;Parent=gene-SO06_RS13665;Dbxref=GenBank:WP_023259267.1;Name=WP_023259267.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=SO06_RS13665;product=cystathionine beta-lyase;protein_id=WP_023259267.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 83683 84342 . + . ID=gene-SO06_RS13670;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=SO06_RS13670 NZ_MYDG01000009.1 Protein Homology CDS 83683 84342 . + 0 ID=cds-WP_000268444.1;Parent=gene-SO06_RS13670;Dbxref=GenBank:WP_000268444.1;Name=WP_000268444.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=SO06_RS13670;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268444.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 84406 85305 . - . ID=gene-SO06_RS13675;Name=SO06_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13675 NZ_MYDG01000009.1 Protein Homology CDS 84406 85305 . - 0 ID=cds-WP_001078198.1;Parent=gene-SO06_RS13675;Dbxref=GenBank:WP_001078198.1;Name=WP_001078198.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=SO06_RS13675;product=AraC family transcriptional regulator;protein_id=WP_001078198.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 85498 86661 . + . ID=gene-SO06_RS13680;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=SO06_RS13680 NZ_MYDG01000009.1 Protein Homology CDS 85498 86661 . + 0 ID=cds-WP_001058722.1;Parent=gene-SO06_RS13680;Dbxref=GenBank:WP_001058722.1;Name=WP_001058722.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=SO06_RS13680;product=alcohol dehydrogenase;protein_id=WP_001058722.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 86767 87594 . + . ID=gene-SO06_RS13685;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=SO06_RS13685 NZ_MYDG01000009.1 Protein Homology CDS 86767 87594 . + 0 ID=cds-WP_001626707.1;Parent=gene-SO06_RS13685;Dbxref=GenBank:WP_001626707.1;Name=WP_001626707.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=SO06_RS13685;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_001626707.1;transl_table=11 NZ_MYDG01000009.1 RefSeq pseudogene 87760 89245 . + . ID=gene-SO06_RS13690;Name=SO06_RS13690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS13690;pseudo=true NZ_MYDG01000009.1 Protein Homology CDS 87760 89245 . + 0 ID=cds-SO06_RS13690;Parent=gene-SO06_RS13690;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=SO06_RS13690;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 89289 89744 . + . ID=gene-SO06_RS13695;Name=SO06_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13695 NZ_MYDG01000009.1 Protein Homology CDS 89289 89744 . + 0 ID=cds-WP_001527932.1;Parent=gene-SO06_RS13695;Dbxref=GenBank:WP_001527932.1;Name=WP_001527932.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=SO06_RS13695;product=HIT family protein;protein_id=WP_001527932.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 89895 90095 . - . ID=gene-SO06_RS13700;Name=SO06_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13700 NZ_MYDG01000009.1 GeneMarkS-2+ CDS 89895 90095 . - 0 ID=cds-WP_023232616.1;Parent=gene-SO06_RS13700;Dbxref=GenBank:WP_023232616.1;Name=WP_023232616.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SO06_RS13700;product=hypothetical protein;protein_id=WP_023232616.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 90298 92469 . - . ID=gene-SO06_RS13705;Name=SO06_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13705 NZ_MYDG01000009.1 Protein Homology CDS 90298 92469 . - 0 ID=cds-WP_023232615.1;Parent=gene-SO06_RS13705;Dbxref=GenBank:WP_023232615.1;Name=WP_023232615.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=SO06_RS13705;product=YgiQ family radical SAM protein;protein_id=WP_023232615.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 92957 93940 . + . ID=gene-SO06_RS13710;Name=SO06_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13710 NZ_MYDG01000009.1 Protein Homology CDS 92957 93940 . + 0 ID=cds-WP_000799371.1;Parent=gene-SO06_RS13710;Dbxref=GenBank:WP_000799371.1;Name=WP_000799371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=SO06_RS13710;product=TRAP transporter substrate-binding protein;protein_id=WP_000799371.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 93982 94464 . + . ID=gene-SO06_RS13715;Name=SO06_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13715 NZ_MYDG01000009.1 Protein Homology CDS 93982 94464 . + 0 ID=cds-WP_001221828.1;Parent=gene-SO06_RS13715;Dbxref=GenBank:WP_001221828.1;Name=WP_001221828.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=SO06_RS13715;product=TRAP transporter small permease;protein_id=WP_001221828.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 94475 95782 . + . ID=gene-SO06_RS13720;Name=SO06_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13720 NZ_MYDG01000009.1 Protein Homology CDS 94475 95782 . + 0 ID=cds-WP_000345259.1;Parent=gene-SO06_RS13720;Dbxref=GenBank:WP_000345259.1;Name=WP_000345259.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=SO06_RS13720;product=TRAP transporter large permease;protein_id=WP_000345259.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 95827 97239 . - . ID=gene-SO06_RS13725;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=SO06_RS13725 NZ_MYDG01000009.1 Protein Homology CDS 95827 97239 . - 0 ID=cds-WP_000010658.1;Parent=gene-SO06_RS13725;Dbxref=GenBank:WP_000010658.1;Name=WP_000010658.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=SO06_RS13725;product=cell division protein FtsP;protein_id=WP_000010658.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 97313 98050 . - . ID=gene-SO06_RS13730;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=SO06_RS13730 NZ_MYDG01000009.1 Protein Homology CDS 97313 98050 . - 0 ID=cds-WP_023232614.1;Parent=gene-SO06_RS13730;Dbxref=GenBank:WP_023232614.1;Name=WP_023232614.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=SO06_RS13730;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_023232614.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 98307 100565 . - . ID=gene-SO06_RS13735;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=SO06_RS13735 NZ_MYDG01000009.1 Protein Homology CDS 98307 100565 . - 0 ID=cds-WP_001281856.1;Parent=gene-SO06_RS13735;Dbxref=GenBank:WP_001281856.1;Name=WP_001281856.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=SO06_RS13735;product=DNA topoisomerase IV subunit A;protein_id=WP_001281856.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 100676 101542 . - . ID=gene-SO06_RS13740;Name=SO06_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13740 NZ_MYDG01000009.1 Protein Homology CDS 100676 101542 . - 0 ID=cds-WP_023232613.1;Parent=gene-SO06_RS13740;Dbxref=GenBank:WP_023232613.1;Name=WP_023232613.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=SO06_RS13740;product=AraC family transcriptional regulator;protein_id=WP_023232613.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 101614 102006 . - . ID=gene-SO06_RS13745;Name=SO06_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13745 NZ_MYDG01000009.1 Protein Homology CDS 101614 102006 . - 0 ID=cds-WP_000731552.1;Parent=gene-SO06_RS13745;Dbxref=GenBank:WP_000731552.1;Name=WP_000731552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=SO06_RS13745;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731552.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 102158 102817 . + . ID=gene-SO06_RS13750;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=SO06_RS13750 NZ_MYDG01000009.1 Protein Homology CDS 102158 102817 . + 0 ID=cds-WP_001221574.1;Parent=gene-SO06_RS13750;Dbxref=GenBank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=SO06_RS13750;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221574.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 102814 104163 . + . ID=gene-SO06_RS13755;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=SO06_RS13755 NZ_MYDG01000009.1 Protein Homology CDS 102814 104163 . + 0 ID=cds-WP_000779328.1;Parent=gene-SO06_RS13755;Dbxref=GenBank:WP_000779328.1;Name=WP_000779328.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=SO06_RS13755;product=quorum sensing histidine kinase QseC;protein_id=WP_000779328.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 104270 104851 . + . ID=gene-SO06_RS13760;Name=SO06_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13760 NZ_MYDG01000009.1 Protein Homology CDS 104270 104851 . + 0 ID=cds-WP_023232612.1;Parent=gene-SO06_RS13760;Dbxref=GenBank:WP_023232612.1;Name=WP_023232612.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=SO06_RS13760;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_023232612.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 104883 105197 . + . ID=gene-SO06_RS13765;Name=SO06_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13765 NZ_MYDG01000009.1 Protein Homology CDS 104883 105197 . + 0 ID=cds-WP_000958587.1;Parent=gene-SO06_RS13765;Dbxref=GenBank:WP_000958587.1;Name=WP_000958587.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=SO06_RS13765;product=putative quinol monooxygenase;protein_id=WP_000958587.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 105322 107214 . - . ID=gene-SO06_RS13770;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=SO06_RS13770 NZ_MYDG01000009.1 Protein Homology CDS 105322 107214 . - 0 ID=cds-WP_000195318.1;Parent=gene-SO06_RS13770;Dbxref=GenBank:WP_000195318.1;Name=WP_000195318.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=SO06_RS13770;product=DNA topoisomerase IV subunit B;protein_id=WP_000195318.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 107242 107823 . - . ID=gene-SO06_RS13775;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=SO06_RS13775 NZ_MYDG01000009.1 Protein Homology CDS 107242 107823 . - 0 ID=cds-WP_000105725.1;Parent=gene-SO06_RS13775;Dbxref=GenBank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=SO06_RS13775;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 107823 108650 . - . ID=gene-SO06_RS13780;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=SO06_RS13780 NZ_MYDG01000009.1 Protein Homology CDS 107823 108650 . - 0 ID=cds-WP_000444735.1;Parent=gene-SO06_RS13780;Dbxref=GenBank:WP_000444735.1;Name=WP_000444735.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=SO06_RS13780;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444735.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 108675 109097 . - . ID=gene-SO06_RS13785;Name=SO06_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13785 NZ_MYDG01000009.1 Protein Homology CDS 108675 109097 . - 0 ID=cds-WP_000833404.1;Parent=gene-SO06_RS13785;Dbxref=GenBank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=SO06_RS13785;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 109094 109726 . - . ID=gene-SO06_RS13790;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=SO06_RS13790 NZ_MYDG01000009.1 Protein Homology CDS 109094 109726 . - 0 ID=cds-WP_023232032.1;Parent=gene-SO06_RS13790;Dbxref=GenBank:WP_023232032.1;Name=WP_023232032.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=SO06_RS13790;product=ADP-ribose diphosphatase;protein_id=WP_023232032.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 109927 111402 . + . ID=gene-SO06_RS13795;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=SO06_RS13795 NZ_MYDG01000009.1 Protein Homology CDS 109927 111402 . + 0 ID=cds-WP_001663008.1;Parent=gene-SO06_RS13795;Dbxref=GenBank:WP_001663008.1;Name=WP_001663008.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=SO06_RS13795;product=outer membrane channel protein TolC;protein_id=WP_001663008.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 111615 112286 . + . ID=gene-SO06_RS13805;Name=SO06_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13805 NZ_MYDG01000009.1 Protein Homology CDS 111615 112286 . + 0 ID=cds-WP_000831528.1;Parent=gene-SO06_RS13805;Dbxref=GenBank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=SO06_RS13805;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 112292 113455 . + . ID=gene-SO06_RS13810;Name=SO06_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13810 NZ_MYDG01000009.1 Protein Homology CDS 112292 113455 . + 0 ID=cds-WP_000442833.1;Parent=gene-SO06_RS13810;Dbxref=GenBank:WP_000442833.1;Name=WP_000442833.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=SO06_RS13810;product=glutathionylspermidine synthase family protein;protein_id=WP_000442833.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 113517 114305 . - . ID=gene-SO06_RS13815;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=SO06_RS13815 NZ_MYDG01000009.1 Protein Homology CDS 113517 114305 . - 0 ID=cds-WP_023232031.1;Parent=gene-SO06_RS13815;Dbxref=GenBank:WP_023232031.1;Name=WP_023232031.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=SO06_RS13815;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_023232031.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 114446 115219 . + . ID=gene-SO06_RS13820;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=SO06_RS13820 NZ_MYDG01000009.1 Protein Homology CDS 114446 115219 . + 0 ID=cds-WP_000115874.1;Parent=gene-SO06_RS13820;Dbxref=GenBank:WP_000115874.1;Name=WP_000115874.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=SO06_RS13820;product=zinc transporter ZupT;protein_id=WP_000115874.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 115286 115462 . - . ID=gene-SO06_RS25655;Name=SO06_RS25655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25655 NZ_MYDG01000009.1 Protein Homology CDS 115286 115462 . - 0 ID=cds-WP_000469259.1;Parent=gene-SO06_RS25655;Dbxref=GenBank:WP_000469259.1;Name=WP_000469259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=SO06_RS25655;product=hypothetical protein;protein_id=WP_000469259.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 115862 117658 . + . ID=gene-SO06_RS13830;Name=SO06_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13830 NZ_MYDG01000009.1 Protein Homology CDS 115862 117658 . + 0 ID=cds-WP_000460259.1;Parent=gene-SO06_RS13830;Dbxref=GenBank:WP_000460259.1;Name=WP_000460259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=SO06_RS13830;product=aryl-sulfate sulfotransferase;protein_id=WP_000460259.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 117678 118349 . + . ID=gene-SO06_RS13835;Name=SO06_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13835 NZ_MYDG01000009.1 Protein Homology CDS 117678 118349 . + 0 ID=cds-WP_000096232.1;Parent=gene-SO06_RS13835;Dbxref=GenBank:WP_000096232.1;Name=WP_000096232.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=SO06_RS13835;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096232.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 118364 119041 . + . ID=gene-SO06_RS13840;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=SO06_RS13840 NZ_MYDG01000009.1 Protein Homology CDS 118364 119041 . + 0 ID=cds-WP_000345576.1;Parent=gene-SO06_RS13840;Dbxref=GenBank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=SO06_RS13840;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 119212 119865 . - . ID=gene-SO06_RS13845;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=SO06_RS13845 NZ_MYDG01000009.1 Protein Homology CDS 119212 119865 . - 0 ID=cds-WP_001076978.1;Parent=gene-SO06_RS13845;Dbxref=GenBank:WP_001076978.1;Name=WP_001076978.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=SO06_RS13845;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11 NZ_MYDG01000009.1 cmsearch riboswitch 119971 120169 . - . ID=id-NZ_MYDG01000009.1:119971..120169;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_MYDG01000009.1 RefSeq gene 120302 120598 . + . ID=gene-SO06_RS13850;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=SO06_RS13850 NZ_MYDG01000009.1 Protein Homology CDS 120302 120598 . + 0 ID=cds-WP_000566824.1;Parent=gene-SO06_RS13850;Dbxref=GenBank:WP_000566824.1;Name=WP_000566824.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=SO06_RS13850;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566824.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 120673 120882 . - . ID=gene-SO06_RS13855;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=SO06_RS13855 NZ_MYDG01000009.1 Protein Homology CDS 120673 120882 . - 0 ID=cds-WP_000928927.1;Parent=gene-SO06_RS13855;Dbxref=GenBank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=SO06_RS13855;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 121140 121760 . + . ID=gene-SO06_RS13860;Name=SO06_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13860 NZ_MYDG01000009.1 Protein Homology CDS 121140 121760 . + 0 ID=cds-WP_000171739.1;Parent=gene-SO06_RS13860;Dbxref=GenBank:WP_000171739.1;Name=WP_000171739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=SO06_RS13860;product=OB-fold-containig protein;protein_id=WP_000171739.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 121779 123458 . + . ID=gene-SO06_RS13865;Name=SO06_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13865 NZ_MYDG01000009.1 Protein Homology CDS 121779 123458 . + 0 ID=cds-WP_000342882.1;Parent=gene-SO06_RS13865;Dbxref=GenBank:WP_000342882.1;Name=WP_000342882.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=SO06_RS13865;product=flotillin family protein;protein_id=WP_000342882.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 123697 123756 . + . ID=gene-SO06_RS25365;Name=SO06_RS25365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS25365 NZ_MYDG01000009.1 Protein Homology CDS 123697 123756 . + 0 ID=cds-WP_001804776.1;Parent=gene-SO06_RS25365;Dbxref=GenBank:WP_001804776.1;Name=WP_001804776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=SO06_RS25365;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001804776.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 123916 125349 . - . ID=gene-SO06_RS13875;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=SO06_RS13875 NZ_MYDG01000009.1 Protein Homology CDS 123916 125349 . - 0 ID=cds-WP_000867682.1;Parent=gene-SO06_RS13875;Dbxref=GenBank:WP_000867682.1;Name=WP_000867682.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=SO06_RS13875;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000867682.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 125397 128240 . - . ID=gene-SO06_RS13880;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=SO06_RS13880 NZ_MYDG01000009.1 Protein Homology CDS 125397 128240 . - 0 ID=cds-WP_023181557.1;Parent=gene-SO06_RS13880;Dbxref=GenBank:WP_023181557.1;Name=WP_023181557.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=SO06_RS13880;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_023181557.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 128358 129659 . - . ID=gene-SO06_RS13885;Name=SO06_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13885 NZ_MYDG01000009.1 Protein Homology CDS 128358 129659 . - 0 ID=cds-WP_000046216.1;Parent=gene-SO06_RS13885;Dbxref=GenBank:WP_000046216.1;Name=WP_000046216.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=SO06_RS13885;product=CYTH domain-containing protein;protein_id=WP_000046216.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 129901 130515 . + . ID=gene-SO06_RS13890;Name=SO06_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13890 NZ_MYDG01000009.1 Protein Homology CDS 129901 130515 . + 0 ID=cds-WP_001125344.1;Parent=gene-SO06_RS13890;Dbxref=GenBank:WP_001125344.1;Name=WP_001125344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=SO06_RS13890;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125344.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 130578 131819 . + . ID=gene-SO06_RS13895;Name=SO06_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13895 NZ_MYDG01000009.1 Protein Homology CDS 130578 131819 . + 0 ID=cds-WP_000708449.1;Parent=gene-SO06_RS13895;Dbxref=GenBank:WP_000708449.1;Name=WP_000708449.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=SO06_RS13895;product=multifunctional CCA addition/repair protein;protein_id=WP_000708449.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 131924 132745 . - . ID=gene-SO06_RS13900;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=SO06_RS13900 NZ_MYDG01000009.1 Protein Homology CDS 131924 132745 . - 0 ID=cds-WP_080204248.1;Parent=gene-SO06_RS13900;Dbxref=GenBank:WP_080204248.1;Name=WP_080204248.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=SO06_RS13900;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_080204248.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 132843 133202 . - . ID=gene-SO06_RS13905;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=SO06_RS13905 NZ_MYDG01000009.1 Protein Homology CDS 132843 133202 . - 0 ID=cds-WP_000355776.1;Parent=gene-SO06_RS13905;Dbxref=GenBank:WP_000355776.1;Name=WP_000355776.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=SO06_RS13905;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_000355776.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 133309 133920 . + . ID=gene-SO06_RS13910;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=SO06_RS13910 NZ_MYDG01000009.1 Protein Homology CDS 133309 133920 . + 0 ID=cds-WP_001272784.1;Parent=gene-SO06_RS13910;Dbxref=GenBank:WP_001272784.1;Name=WP_001272784.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=SO06_RS13910;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272784.1;transl_table=11 NZ_MYDG01000009.1 RefSeq pseudogene 133904 134047 . + . ID=gene-SO06_RS25050;Name=SO06_RS25050;end_range=134047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SO06_RS25050;partial=true;pseudo=true;start_range=.,133904 NZ_MYDG01000009.1 Protein Homology CDS 133904 134047 . + 0 ID=cds-SO06_RS25050;Parent=gene-SO06_RS25050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;end_range=134047,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=SO06_RS25050;partial=true;product=fumarate hydratase;pseudo=true;start_range=.,133904;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 134170 135183 . - . ID=gene-SO06_RS13920;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=SO06_RS13920 NZ_MYDG01000009.1 Protein Homology CDS 134170 135183 . - 0 ID=cds-WP_001264390.1;Parent=gene-SO06_RS13920;Dbxref=GenBank:WP_001264390.1;Name=WP_001264390.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=SO06_RS13920;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264390.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 135411 135626 . + . ID=gene-SO06_RS13930;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=SO06_RS13930 NZ_MYDG01000009.1 Protein Homology CDS 135411 135626 . + 0 ID=cds-WP_001144069.1;Parent=gene-SO06_RS13930;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=SO06_RS13930;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 135862 137607 . + . ID=gene-SO06_RS13935;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=SO06_RS13935 NZ_MYDG01000009.1 Protein Homology CDS 135862 137607 . + 0 ID=cds-WP_000918865.1;Parent=gene-SO06_RS13935;Dbxref=GenBank:WP_000918865.1;Name=WP_000918865.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=SO06_RS13935;product=DNA primase;protein_id=WP_000918865.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 137622 139604 . + . ID=gene-SO06_RS13940;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=SO06_RS13940 NZ_MYDG01000009.1 Protein Homology CDS 137622 139604 . + 0 ID=cds-WP_001120159.1;Parent=gene-SO06_RS13940;Dbxref=GenBank:WP_001120159.1;Name=WP_001120159.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=SO06_RS13940;product=RNA polymerase sigma factor RpoD;protein_id=WP_001120159.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 139728 140234 . - . ID=gene-SO06_RS13945;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=SO06_RS13945 NZ_MYDG01000009.1 Protein Homology CDS 139728 140234 . - 0 ID=cds-WP_000237776.1;Parent=gene-SO06_RS13945;Dbxref=GenBank:WP_000237776.1;Name=WP_000237776.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=SO06_RS13945;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237776.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 140360 140435 . + . ID=gene-SO06_RS13950;Name=SO06_RS13950;gbkey=Gene;gene_biotype=tRNA;locus_tag=SO06_RS13950 NZ_MYDG01000009.1 tRNAscan-SE tRNA 140360 140435 . + . ID=rna-SO06_RS13950;Parent=gene-SO06_RS13950;anticodon=(pos:140393..140395);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS13950;product=tRNA-Ile NZ_MYDG01000009.1 tRNAscan-SE exon 140360 140435 . + . ID=exon-SO06_RS13950-1;Parent=rna-SO06_RS13950;anticodon=(pos:140393..140395);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SO06_RS13950;product=tRNA-Ile NZ_MYDG01000009.1 RefSeq gene 140515 141282 . - . ID=gene-SO06_RS13955;Name=SO06_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13955 NZ_MYDG01000009.1 Protein Homology CDS 140515 141282 . - 0 ID=cds-WP_023232311.1;Parent=gene-SO06_RS13955;Dbxref=GenBank:WP_023232311.1;Name=WP_023232311.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=SO06_RS13955;product=siderophore-interacting protein;protein_id=WP_023232311.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 141514 142161 . + . ID=gene-SO06_RS13960;Name=SO06_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13960 NZ_MYDG01000009.1 Protein Homology CDS 141514 142161 . + 0 ID=cds-WP_094204712.1;Parent=gene-SO06_RS13960;Dbxref=GenBank:WP_094204712.1;Name=WP_094204712.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=SO06_RS13960;product=PadR family transcriptional regulator;protein_id=WP_094204712.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 142158 143726 . - . ID=gene-SO06_RS13965;Name=SO06_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13965 NZ_MYDG01000009.1 Protein Homology CDS 142158 143726 . - 0 ID=cds-WP_000478462.1;Parent=gene-SO06_RS13965;Dbxref=GenBank:WP_000478462.1;Name=WP_000478462.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=SO06_RS13965;product=methyl-accepting chemotaxis protein;protein_id=WP_000478462.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 144114 145634 . - . ID=gene-SO06_RS13970;Name=SO06_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13970 NZ_MYDG01000009.1 Protein Homology CDS 144114 145634 . - 0 ID=cds-WP_000094645.1;Parent=gene-SO06_RS13970;Dbxref=GenBank:WP_000094645.1;Name=WP_000094645.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=SO06_RS13970;product=methyl-accepting chemotaxis protein;protein_id=WP_000094645.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 146064 147443 . + . ID=gene-SO06_RS13980;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=SO06_RS13980 NZ_MYDG01000009.1 Protein Homology CDS 146064 147443 . + 0 ID=cds-WP_001520281.1;Parent=gene-SO06_RS13980;Dbxref=GenBank:WP_001520281.1;Name=WP_001520281.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=SO06_RS13980;product=putrescine aminotransferase;protein_id=WP_001520281.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 147614 149632 . + . ID=gene-SO06_RS13985;Name=SO06_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13985 NZ_MYDG01000009.1 Protein Homology CDS 147614 149632 . + 0 ID=cds-WP_023232313.1;Parent=gene-SO06_RS13985;Dbxref=GenBank:WP_023232313.1;Name=WP_023232313.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=SO06_RS13985;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_023232313.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 149713 150849 . - . ID=gene-SO06_RS13990;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=SO06_RS13990 NZ_MYDG01000009.1 Protein Homology CDS 149713 150849 . - 0 ID=cds-WP_000019989.1;Parent=gene-SO06_RS13990;Dbxref=GenBank:WP_000019989.1;Name=WP_000019989.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=SO06_RS13990;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000019989.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 150935 151432 . + . ID=gene-SO06_RS13995;Name=SO06_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS13995 NZ_MYDG01000009.1 Protein Homology CDS 150935 151432 . + 0 ID=cds-WP_000202969.1;Parent=gene-SO06_RS13995;Dbxref=GenBank:WP_000202969.1;Name=WP_000202969.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=SO06_RS13995;product=M48 metallopeptidase family protein;protein_id=WP_000202969.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 151584 152276 . + . ID=gene-SO06_RS14000;Name=SO06_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14000 NZ_MYDG01000009.1 Protein Homology CDS 151584 152276 . + 0 ID=cds-WP_023232314.1;Parent=gene-SO06_RS14000;Dbxref=GenBank:WP_023232314.1;Name=WP_023232314.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=SO06_RS14000;product=SanA/YdcF family protein;protein_id=WP_023232314.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 152365 153363 . + . ID=gene-SO06_RS14005;Name=SO06_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14005 NZ_MYDG01000009.1 Protein Homology CDS 152365 153363 . + 0 ID=cds-WP_000617682.1;Parent=gene-SO06_RS14005;Dbxref=GenBank:WP_000617682.1;Name=WP_000617682.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=SO06_RS14005;product=Gfo/Idh/MocA family protein;protein_id=WP_000617682.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 153633 154601 . + . ID=gene-SO06_RS14010;Name=SO06_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14010 NZ_MYDG01000009.1 Protein Homology CDS 153633 154601 . + 0 ID=cds-WP_001098833.1;Parent=gene-SO06_RS14010;Dbxref=GenBank:WP_001098833.1;Name=WP_001098833.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=SO06_RS14010;product=TerC family protein;protein_id=WP_001098833.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 154856 156100 . + . ID=gene-SO06_RS14015;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=SO06_RS14015 NZ_MYDG01000009.1 Protein Homology CDS 154856 156100 . + 0 ID=cds-WP_000235363.1;Parent=gene-SO06_RS14015;Dbxref=GenBank:WP_000235363.1;Name=WP_000235363.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=SO06_RS14015;product=serine/threonine transporter SstT;protein_id=WP_000235363.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 156550 157212 . + . ID=gene-SO06_RS14025;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=SO06_RS14025 NZ_MYDG01000009.1 Protein Homology CDS 156550 157212 . + 0 ID=cds-WP_000422143.1;Parent=gene-SO06_RS14025;Dbxref=GenBank:WP_000422143.1;Name=WP_000422143.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=SO06_RS14025;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422143.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 157216 157599 . + . ID=gene-SO06_RS14030;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=SO06_RS14030 NZ_MYDG01000009.1 Protein Homology CDS 157216 157599 . + 0 ID=cds-WP_000917516.1;Parent=gene-SO06_RS14030;Dbxref=GenBank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=SO06_RS14030;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 157744 158112 . + . ID=gene-SO06_RS14035;Name=SO06_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14035 NZ_MYDG01000009.1 Protein Homology CDS 157744 158112 . + 0 ID=cds-WP_000877300.1;Parent=gene-SO06_RS14035;Dbxref=GenBank:WP_000877300.1;Name=WP_000877300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=SO06_RS14035;product=DUF1090 domain-containing protein;protein_id=WP_000877300.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 158154 158459 . + . ID=gene-SO06_RS14040;Name=SO06_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14040 NZ_MYDG01000009.1 Protein Homology CDS 158154 158459 . + 0 ID=cds-WP_000031219.1;Parent=gene-SO06_RS14040;Dbxref=GenBank:WP_000031219.1;Name=WP_000031219.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=SO06_RS14040;product=DUF883 family protein;protein_id=WP_000031219.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 158462 158860 . + . ID=gene-SO06_RS14045;Name=SO06_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14045 NZ_MYDG01000009.1 Protein Homology CDS 158462 158860 . + 0 ID=cds-WP_000785626.1;Parent=gene-SO06_RS14045;Dbxref=GenBank:WP_000785626.1;Name=WP_000785626.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=SO06_RS14045;product=phage holin family protein;protein_id=WP_000785626.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 158857 159156 . + . ID=gene-SO06_RS14050;Name=SO06_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14050 NZ_MYDG01000009.1 Protein Homology CDS 158857 159156 . + 0 ID=cds-WP_000095496.1;Parent=gene-SO06_RS14050;Dbxref=GenBank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=SO06_RS14050;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 159404 159796 . + . ID=gene-SO06_RS14055;Name=SO06_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14055 NZ_MYDG01000009.1 Protein Homology CDS 159404 159796 . + 0 ID=cds-WP_001592732.1;Parent=gene-SO06_RS14055;Dbxref=GenBank:WP_001592732.1;Name=WP_001592732.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=SO06_RS14055;product=DoxX family protein;protein_id=WP_001592732.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 159864 160850 . + . ID=gene-SO06_RS14060;Name=SO06_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14060 NZ_MYDG01000009.1 Protein Homology CDS 159864 160850 . + 0 ID=cds-WP_023232315.1;Parent=gene-SO06_RS14060;Dbxref=GenBank:WP_023232315.1;Name=WP_023232315.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=SO06_RS14060;product=glutathione S-transferase family protein;protein_id=WP_023232315.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 160974 161339 . + . ID=gene-SO06_RS14065;Name=SO06_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14065 NZ_MYDG01000009.1 Protein Homology CDS 160974 161339 . + 0 ID=cds-WP_000384139.1;Parent=gene-SO06_RS14065;Dbxref=GenBank:WP_000384139.1;Name=WP_000384139.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=SO06_RS14065;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 161378 162274 . - . ID=gene-SO06_RS14070;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=SO06_RS14070 NZ_MYDG01000009.1 Protein Homology CDS 161378 162274 . - 0 ID=cds-WP_001041026.1;Parent=gene-SO06_RS14070;Dbxref=GenBank:WP_001041026.1;Name=WP_001041026.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=SO06_RS14070;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041026.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 162379 163080 . + . ID=gene-SO06_RS14075;Name=SO06_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14075 NZ_MYDG01000009.1 Protein Homology CDS 162379 163080 . + 0 ID=cds-WP_000633549.1;Parent=gene-SO06_RS14075;Dbxref=GenBank:WP_000633549.1;Name=WP_000633549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=SO06_RS14075;product=pirin family protein;protein_id=WP_000633549.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 163104 163268 . + . ID=gene-SO06_RS14080;Name=SO06_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14080 NZ_MYDG01000009.1 Protein Homology CDS 163104 163268 . + 0 ID=cds-WP_000039326.1;Parent=gene-SO06_RS14080;Dbxref=GenBank:WP_000039326.1;Name=WP_000039326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=SO06_RS14080;product=hypothetical protein;protein_id=WP_000039326.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 163381 164691 . - . ID=gene-SO06_RS14085;Name=SO06_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14085 NZ_MYDG01000009.1 Protein Homology CDS 163381 164691 . - 0 ID=cds-WP_023232316.1;Parent=gene-SO06_RS14085;Dbxref=GenBank:WP_023232316.1;Name=WP_023232316.1;Ontology_term=GO:0051539,GO:0080146;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,L-cysteine desulfhydrase activity|0080146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=SO06_RS14085;product=L-cysteine desulfidase family protein;protein_id=WP_023232316.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 164717 166048 . - . ID=gene-SO06_RS14090;Name=SO06_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14090 NZ_MYDG01000009.1 Protein Homology CDS 164717 166048 . - 0 ID=cds-WP_000443187.1;Parent=gene-SO06_RS14090;Dbxref=GenBank:WP_000443187.1;Name=WP_000443187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=SO06_RS14090;product=amino acid permease;protein_id=WP_000443187.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 166364 167728 . - . ID=gene-SO06_RS14095;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=SO06_RS14095 NZ_MYDG01000009.1 Protein Homology CDS 166364 167728 . - 0 ID=cds-WP_080204249.1;Parent=gene-SO06_RS14095;Dbxref=GenBank:WP_080204249.1;Name=WP_080204249.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=SO06_RS14095;product=L-serine ammonia-lyase;protein_id=WP_080204249.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 167798 170092 . - . ID=gene-SO06_RS14100;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=SO06_RS14100 NZ_MYDG01000009.1 Protein Homology CDS 167798 170092 . - 0 ID=cds-WP_080204250.1;Parent=gene-SO06_RS14100;Dbxref=GenBank:WP_080204250.1;Name=WP_080204250.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=SO06_RS14100;product=formate C-acetyltransferase;protein_id=WP_080204250.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 170126 171334 . - . ID=gene-SO06_RS14105;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=SO06_RS14105 NZ_MYDG01000009.1 Protein Homology CDS 170126 171334 . - 0 ID=cds-WP_023232317.1;Parent=gene-SO06_RS14105;Dbxref=GenBank:WP_023232317.1;Name=WP_023232317.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=SO06_RS14105;product=propionate kinase;protein_id=WP_023232317.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 171402 172733 . - . ID=gene-SO06_RS14110;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=SO06_RS14110 NZ_MYDG01000009.1 Protein Homology CDS 171402 172733 . - 0 ID=cds-WP_000108129.1;Parent=gene-SO06_RS14110;Dbxref=GenBank:WP_000108129.1;Name=WP_000108129.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=SO06_RS14110;product=threonine/serine transporter TdcC;protein_id=WP_000108129.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 172754 173743 . - . ID=gene-SO06_RS14115;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=SO06_RS14115 NZ_MYDG01000009.1 Protein Homology CDS 172754 173743 . - 0 ID=cds-WP_000548368.1;Parent=gene-SO06_RS14115;Dbxref=GenBank:WP_000548368.1;Name=WP_000548368.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=SO06_RS14115;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548368.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 173841 174779 . - . ID=gene-SO06_RS14120;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=SO06_RS14120 NZ_MYDG01000009.1 Protein Homology CDS 173841 174779 . - 0 ID=cds-WP_001094907.1;Parent=gene-SO06_RS14120;Dbxref=GenBank:WP_001094907.1;Name=WP_001094907.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=SO06_RS14120;product=transcriptional regulator TdcA;protein_id=WP_001094907.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 175726 176100 . - . ID=gene-SO06_RS14140;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=SO06_RS14140 NZ_MYDG01000009.1 cmsearch RNase_P_RNA 175726 176100 . - . ID=rna-SO06_RS14140;Parent=gene-SO06_RS14140;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS14140;product=RNase P RNA component class A NZ_MYDG01000009.1 cmsearch exon 175726 176100 . - . ID=exon-SO06_RS14140-1;Parent=rna-SO06_RS14140;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=SO06_RS14140;product=RNase P RNA component class A NZ_MYDG01000009.1 RefSeq gene 176133 177278 . - . ID=gene-SO06_RS14145;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=SO06_RS14145 NZ_MYDG01000009.1 Protein Homology CDS 176133 177278 . - 0 ID=cds-WP_000706458.1;Parent=gene-SO06_RS14145;Dbxref=GenBank:WP_000706458.1;Name=WP_000706458.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=SO06_RS14145;product=glycerate 2-kinase;protein_id=WP_000706458.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 177376 178266 . - . ID=gene-SO06_RS14150;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=SO06_RS14150 NZ_MYDG01000009.1 Protein Homology CDS 177376 178266 . - 0 ID=cds-WP_000178106.1;Parent=gene-SO06_RS14150;Dbxref=GenBank:WP_000178106.1;Name=WP_000178106.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=SO06_RS14150;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000178106.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 178292 179062 . - . ID=gene-SO06_RS14155;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=SO06_RS14155 NZ_MYDG01000009.1 Protein Homology CDS 178292 179062 . - 0 ID=cds-WP_001057715.1;Parent=gene-SO06_RS14155;Dbxref=GenBank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=SO06_RS14155;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 179592 181163 . + . ID=gene-SO06_RS14160;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=SO06_RS14160 NZ_MYDG01000009.1 Protein Homology CDS 179592 181163 . + 0 ID=cds-WP_001273723.1;Parent=gene-SO06_RS14160;Dbxref=GenBank:WP_001273723.1;Name=WP_001273723.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=SO06_RS14160;product=galactarate dehydratase;protein_id=WP_001273723.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 181421 182275 . + . ID=gene-SO06_RS14165;Name=SO06_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14165 NZ_MYDG01000009.1 Protein Homology CDS 181421 182275 . + 0 ID=cds-WP_000469979.1;Parent=gene-SO06_RS14165;Dbxref=GenBank:WP_000469979.1;Name=WP_000469979.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=SO06_RS14165;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469979.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 182395 183666 . + . ID=gene-SO06_RS14170;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=SO06_RS14170 NZ_MYDG01000009.1 Protein Homology CDS 182395 183666 . + 0 ID=cds-WP_000658736.1;Parent=gene-SO06_RS14170;Dbxref=GenBank:WP_000658736.1;Name=WP_000658736.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=SO06_RS14170;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_000658736.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 183681 184145 . + . ID=gene-SO06_RS14175;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=SO06_RS14175 NZ_MYDG01000009.1 Protein Homology CDS 183681 184145 . + 0 ID=cds-WP_023232319.1;Parent=gene-SO06_RS14175;Dbxref=GenBank:WP_023232319.1;Name=WP_023232319.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=SO06_RS14175;product=PTS galactitol transporter subunit IIA;protein_id=WP_023232319.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 184176 184460 . + . ID=gene-SO06_RS14180;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=SO06_RS14180 NZ_MYDG01000009.1 Protein Homology CDS 184176 184460 . + 0 ID=cds-WP_000824293.1;Parent=gene-SO06_RS14180;Dbxref=GenBank:WP_000824293.1;Name=WP_000824293.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=SO06_RS14180;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824293.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 184464 185837 . + . ID=gene-SO06_RS14185;Name=SO06_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14185 NZ_MYDG01000009.1 Protein Homology CDS 184464 185837 . + 0 ID=cds-WP_023232320.1;Parent=gene-SO06_RS14185;Dbxref=GenBank:WP_023232320.1;Name=WP_023232320.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=SO06_RS14185;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_023232320.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 185881 186924 . + . ID=gene-SO06_RS14190;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=SO06_RS14190 NZ_MYDG01000009.1 Protein Homology CDS 185881 186924 . + 0 ID=cds-WP_000844173.1;Parent=gene-SO06_RS14190;Dbxref=GenBank:WP_000844173.1;Name=WP_000844173.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=SO06_RS14190;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844173.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 187035 187808 . + . ID=gene-SO06_RS14195;Name=SO06_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14195 NZ_MYDG01000009.1 Protein Homology CDS 187035 187808 . + 0 ID=cds-WP_001083899.1;Parent=gene-SO06_RS14195;Dbxref=GenBank:WP_001083899.1;Name=WP_001083899.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=SO06_RS14195;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001083899.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 187966 188829 . - . ID=gene-SO06_RS14200;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=SO06_RS14200 NZ_MYDG01000009.1 Protein Homology CDS 187966 188829 . - 0 ID=cds-WP_000812295.1;Parent=gene-SO06_RS14200;Dbxref=GenBank:WP_000812295.1;Name=WP_000812295.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=SO06_RS14200;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000812295.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 188893 190935 . + . ID=gene-SO06_RS14205;Name=SO06_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14205 NZ_MYDG01000009.1 Protein Homology CDS 188893 190935 . + 0 ID=cds-WP_023232321.1;Parent=gene-SO06_RS14205;Dbxref=GenBank:WP_023232321.1;Name=WP_023232321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=SO06_RS14205;product=penicillin-binding protein activator;protein_id=WP_023232321.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 190893 191288 . + . ID=gene-SO06_RS14210;Name=SO06_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14210 NZ_MYDG01000009.1 Protein Homology CDS 190893 191288 . + 0 ID=cds-WP_000057285.1;Parent=gene-SO06_RS14210;Dbxref=GenBank:WP_000057285.1;Name=WP_000057285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=SO06_RS14210;product=YraN family protein;protein_id=WP_000057285.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 191310 191900 . + . ID=gene-SO06_RS14215;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=SO06_RS14215 NZ_MYDG01000009.1 Protein Homology CDS 191310 191900 . + 0 ID=cds-WP_000893481.1;Parent=gene-SO06_RS14215;Dbxref=GenBank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=SO06_RS14215;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 191910 192485 . + . ID=gene-SO06_RS14220;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=SO06_RS14220 NZ_MYDG01000009.1 Protein Homology CDS 191910 192485 . + 0 ID=cds-WP_000643280.1;Parent=gene-SO06_RS14220;Dbxref=GenBank:WP_000643280.1;Name=WP_000643280.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=SO06_RS14220;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000643280.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 192552 193187 . - . ID=gene-SO06_RS14225;Name=SO06_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14225 NZ_MYDG01000009.1 Protein Homology CDS 192552 193187 . - 0 ID=cds-WP_001530791.1;Parent=gene-SO06_RS14225;Dbxref=GenBank:WP_001530791.1;Name=WP_001530791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312060.2;locus_tag=SO06_RS14225;product=NAD(P)H-binding protein;protein_id=WP_001530791.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 193318 193836 . + . ID=gene-SO06_RS14230;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=SO06_RS14230 NZ_MYDG01000009.1 Protein Homology CDS 193318 193836 . + 0 ID=cds-WP_000037599.1;Parent=gene-SO06_RS14230;Dbxref=GenBank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=SO06_RS14230;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 193816 194259 . - . ID=gene-SO06_RS14235;Name=SO06_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14235 NZ_MYDG01000009.1 Protein Homology CDS 193816 194259 . - 0 ID=cds-WP_000380404.1;Parent=gene-SO06_RS14235;Dbxref=GenBank:WP_000380404.1;Name=WP_000380404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=SO06_RS14235;product=YhbP family protein;protein_id=WP_000380404.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 194297 194614 . + . ID=gene-SO06_RS14240;Name=SO06_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14240 NZ_MYDG01000009.1 Protein Homology CDS 194297 194614 . + 0 ID=cds-WP_000928379.1;Parent=gene-SO06_RS14240;Dbxref=GenBank:WP_000928379.1;Name=WP_000928379.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=SO06_RS14240;product=GIY-YIG nuclease family protein;protein_id=WP_000928379.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 194601 195104 . - . ID=gene-SO06_RS14245;Name=SO06_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14245 NZ_MYDG01000009.1 Protein Homology CDS 194601 195104 . - 0 ID=cds-WP_000908562.1;Parent=gene-SO06_RS14245;Dbxref=GenBank:WP_000908562.1;Name=WP_000908562.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=SO06_RS14245;product=GNAT family N-acetyltransferase;protein_id=WP_000908562.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 195098 195622 . - . ID=gene-SO06_RS14250;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=SO06_RS14250 NZ_MYDG01000009.1 Protein Homology CDS 195098 195622 . - 0 ID=cds-WP_000884721.1;Parent=gene-SO06_RS14250;Dbxref=GenBank:WP_000884721.1;Name=WP_000884721.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=SO06_RS14250;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_000884721.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 195839 196834 . + . ID=gene-SO06_RS14255;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=SO06_RS14255 NZ_MYDG01000009.1 Protein Homology CDS 195839 196834 . + 0 ID=cds-WP_000421309.1;Parent=gene-SO06_RS14255;Dbxref=GenBank:WP_000421309.1;Name=WP_000421309.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=SO06_RS14255;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421309.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 196843 197721 . + . ID=gene-SO06_RS14260;Name=SO06_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14260 NZ_MYDG01000009.1 Protein Homology CDS 196843 197721 . + 0 ID=cds-WP_000877715.1;Parent=gene-SO06_RS14260;Dbxref=GenBank:WP_000877715.1;Name=WP_000877715.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=SO06_RS14260;product=U32 family peptidase;protein_id=WP_000877715.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 197899 198906 . + . ID=gene-SO06_RS14265;Name=SO06_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SO06_RS14265 NZ_MYDG01000009.1 Protein Homology CDS 197899 198906 . + 0 ID=cds-WP_023232323.1;Parent=gene-SO06_RS14265;Dbxref=GenBank:WP_023232323.1;Name=WP_023232323.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=SO06_RS14265;product=luciferase-like monooxygenase;protein_id=WP_023232323.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 198997 200241 . - . ID=gene-SO06_RS14270;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=SO06_RS14270 NZ_MYDG01000009.1 Protein Homology CDS 198997 200241 . - 0 ID=cds-WP_000224373.1;Parent=gene-SO06_RS14270;Dbxref=GenBank:WP_000224373.1;Name=WP_000224373.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=SO06_RS14270;product=tryptophan permease;protein_id=WP_000224373.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 200395 202284 . - . ID=gene-SO06_RS14275;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=SO06_RS14275 NZ_MYDG01000009.1 Protein Homology CDS 200395 202284 . - 0 ID=cds-WP_000807248.1;Parent=gene-SO06_RS14275;Dbxref=GenBank:WP_000807248.1;Name=WP_000807248.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=SO06_RS14275;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807248.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 202277 202357 . - . ID=gene-SO06_RS25060;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=SO06_RS25060 NZ_MYDG01000009.1 Protein Homology CDS 202277 202357 . - 0 ID=cds-WP_010723222.1;Parent=gene-SO06_RS25060;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=SO06_RS25060;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 202463 203347 . - . ID=gene-SO06_RS14280;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=SO06_RS14280 NZ_MYDG01000009.1 Protein Homology CDS 202463 203347 . - 0 ID=cds-WP_023232324.1;Parent=gene-SO06_RS14280;Dbxref=GenBank:WP_023232324.1;Name=WP_023232324.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=SO06_RS14280;product=lipoprotein NlpI;protein_id=WP_023232324.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 203457 205592 . - . ID=gene-SO06_RS14285;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=SO06_RS14285 NZ_MYDG01000009.1 Protein Homology CDS 203457 205592 . - 0 ID=cds-WP_001670767.1;Parent=gene-SO06_RS14285;Dbxref=GenBank:WP_001670767.1;Name=WP_001670767.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=SO06_RS14285;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001670767.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 205834 206103 . - . ID=gene-SO06_RS14290;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=SO06_RS14290 NZ_MYDG01000009.1 Protein Homology CDS 205834 206103 . - 0 ID=cds-WP_000059465.1;Parent=gene-SO06_RS14290;Dbxref=GenBank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=SO06_RS14290;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 206254 207198 . - . ID=gene-SO06_RS14295;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=SO06_RS14295 NZ_MYDG01000009.1 Protein Homology CDS 206254 207198 . - 0 ID=cds-WP_023232325.1;Parent=gene-SO06_RS14295;Dbxref=GenBank:WP_023232325.1;Name=WP_023232325.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=SO06_RS14295;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_023232325.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 207198 207599 . - . ID=gene-SO06_RS14300;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=SO06_RS14300 NZ_MYDG01000009.1 Protein Homology CDS 207198 207599 . - 0 ID=cds-WP_001040208.1;Parent=gene-SO06_RS14300;Dbxref=GenBank:WP_001040208.1;Name=WP_001040208.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=SO06_RS14300;product=30S ribosome-binding factor RbfA;protein_id=WP_001040208.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 207820 210498 . - . ID=gene-SO06_RS14305;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=SO06_RS14305 NZ_MYDG01000009.1 Protein Homology CDS 207820 210498 . - 0 ID=cds-WP_000133064.1;Parent=gene-SO06_RS14305;Dbxref=GenBank:WP_000133064.1;Name=WP_000133064.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=SO06_RS14305;product=translation initiation factor IF-2;protein_id=WP_000133064.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 210523 212025 . - . ID=gene-SO06_RS14310;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=SO06_RS14310 NZ_MYDG01000009.1 Protein Homology CDS 210523 212025 . - 0 ID=cds-WP_001031038.1;Parent=gene-SO06_RS14310;Dbxref=GenBank:WP_001031038.1;Name=WP_001031038.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=SO06_RS14310;product=transcription termination factor NusA;protein_id=WP_001031038.1;transl_table=11 NZ_MYDG01000009.1 RefSeq gene 212053 212505 . - . ID=gene-SO06_RS14315;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=SO06_RS14315 NZ_MYDG01000009.1 Protein Homology CDS 212053 212505 . - 0 ID=cds-WP_000105461.1;Parent=gene-SO06_RS14315;Dbxref=GenBank:WP_000105461.1;Name=WP_000105461.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=SO06_RS14315;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11 ###